locus-tag	class	description
CAB88_00070	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CAB88_00075	COG4856	YbbR-like protein
CAB88_00115	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_00120	COG2011	ABC-type metal ion transport system permease component
CAB88_00125	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CAB88_00130	COG1464	Belongs to the NlpA lipoprotein family
CAB88_00135	COG0604	alcohol dehydrogenase
CAB88_00145	COG0277	FAD linked oxidase domain protein
CAB88_00150	COG2271	Major facilitator Superfamily
CAB88_00160	COG2814	Major facilitator Superfamily
CAB88_00180	COG0601	transmembrane transport
CAB88_00190	COG0444	Belongs to the ABC transporter superfamily
CAB88_00195	COG4608	Belongs to the ABC transporter superfamily
CAB88_00200	COG4166	transmembrane transport
CAB88_00215	COG4166	transmembrane transport
CAB88_00220	COG4166	transmembrane transport
CAB88_00225	COG0656	L-ascorbic acid biosynthetic process
CAB88_00250	COG4149	molybdate abc transporter
CAB88_00255	COG0725	ABC transporter, periplasmic molybdate-binding protein
CAB88_00260	COG1910	domain protein
CAB88_00280	COG0697	spore germination
CAB88_00295	COG0204	Acyl-transferase
CAB88_00310	COG1609	Transcriptional regulator
CAB88_00320	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_00340	COG5298	Protein conserved in bacteria
CAB88_00365	COG0488	(ABC) transporter
CAB88_00380	COG0747	negative chemotaxis
CAB88_00385	COG0601	transmembrane transport
CAB88_00395	COG0444	Belongs to the ABC transporter superfamily
CAB88_00400	COG4608	Belongs to the ABC transporter superfamily
CAB88_00405	COG0561	phosphatase activity
CAB88_00435	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CAB88_00440	COG0179	Fumarylacetoacetate (FAA) hydrolase
CAB88_00450	COG0531	amino acid
CAB88_00460	COG2814	Major facilitator Superfamily
CAB88_00470	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CAB88_00480	COG4294	response to UV
CAB88_00485	COG0705	Rhomboid family
CAB88_00495	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CAB88_00500	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CAB88_00505	COG0864	Transcriptional regulator
CAB88_00510	COG2337	Toxic component of a toxin-antitoxin (TA) module
CAB88_00515	COG2183	response to ionizing radiation
CAB88_00615	COG0802	atpase or kinase
CAB88_00620	COG1214	PFAM Peptidase M22, glycoprotease
CAB88_00625	COG0456	acetyltransferase
CAB88_00635	COG0488	(ABC) transporter
CAB88_00650	COG1266	CAAX protease self-immunity
CAB88_00680	COG2252	PERMEase
CAB88_00690	COG5002	protein histidine kinase activity
CAB88_00715	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CAB88_00770	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB88_00780	COG1215	transferase activity, transferring glycosyl groups
CAB88_00800	COG0697	spore germination
CAB88_00830	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CAB88_00835	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CAB88_00840	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CAB88_00850	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CAB88_00865	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CAB88_00875	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CAB88_00885	COG0151	Belongs to the GarS family
CAB88_00895	COG0583	DNA-binding transcription factor activity
CAB88_00920	COG0210	DNA helicase
CAB88_00930	COG4851	CamS sex pheromone cAM373 precursor
CAB88_00945	COG1335	isochorismatase
CAB88_00955	COG2011	ABC-type metal ion transport system permease component
CAB88_00960	COG1464	Belongs to the NlpA lipoprotein family
CAB88_00975	COG0003	Pfam Anion-transporting ATPase
CAB88_00980	COG1846	Transcriptional regulator
CAB88_00985	COG4682	membrane
CAB88_01005	COG1597	lipid kinase activity
CAB88_01015	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CAB88_01025	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_01030	COG2076	Multidrug Resistance protein
CAB88_01040	COG2309	aminopeptidase activity
CAB88_01055	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_01065	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CAB88_01070	COG4807	Protein conserved in bacteria
CAB88_01100	COG1473	amidohydrolase
CAB88_01120	COG0450	alkyl hydroperoxide reductase
CAB88_01125	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
CAB88_01135	COG0235	Class ii aldolase
CAB88_01140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_01145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_01150	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_01175	COG0166	Belongs to the GPI family
CAB88_01205	COG5002	protein histidine kinase activity
CAB88_01225	COG3541	Predicted nucleotidyltransferase
CAB88_01230	COG2814	Major facilitator Superfamily
CAB88_01235	COG0723	plastoquinol--plastocyanin reductase activity
CAB88_01235	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB88_01245	COG0765	amino acid transport
CAB88_01250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_01260	COG0840	transmembrane signaling receptor activity
CAB88_01285	COG0549	Belongs to the carbamate kinase family
CAB88_01290	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB88_01300	COG0277	FAD linked oxidase domain protein
CAB88_01305	COG0366	Alpha amylase catalytic
CAB88_01310	COG2190	(PTS) system
CAB88_01310	COG1263	PTS System
CAB88_01310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_01340	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CAB88_01360	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB88_01365	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CAB88_01370	COG1116	anion transmembrane transporter activity
CAB88_01375	COG0488	(ABC) transporter
CAB88_01425	COG2270	Major facilitator Superfamily
CAB88_01455	COG2310	stress, protein
CAB88_01460	COG2310	stress, protein
CAB88_01465	COG2310	stress, protein
CAB88_01470	COG0861	Integral membrane protein TerC family
CAB88_01480	COG3853	Toxic anion resistance protein (TelA)
CAB88_01495	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CAB88_01505	COG1295	ribonuclease BN
CAB88_01515	COG2217	Heavy metal translocating P-type atpase
CAB88_01520	COG0697	spore germination
CAB88_01540	COG0586	Pfam SNARE associated Golgi protein
CAB88_01555	COG3871	stress protein (general stress protein 26)
CAB88_01560	COG0387	Pfam Sodium calcium exchanger
CAB88_01570	COG0535	radical SAM domain protein
CAB88_01590	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CAB88_01595	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CAB88_01610	COG3829	transcription factor binding
CAB88_01620	COG0833	amino acid
CAB88_01625	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CAB88_01655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_01655	COG1263	PTS System
CAB88_01660	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_01675	COG1216	Glycosyl transferase, family 2
CAB88_01685	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB88_01685	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CAB88_01690	COG0463	Glycosyl transferase, family 2
CAB88_01705	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CAB88_01725	COG1228	amidohydrolase
CAB88_01730	COG1090	epimerase
CAB88_01760	COG1988	membrane-bound metal-dependent
CAB88_01765	COG1194	a g-specific adenine glycosylase
CAB88_01790	COG1132	(ABC) transporter
CAB88_01795	COG4129	membrane
CAB88_01800	COG0067	glutamate synthase
CAB88_01800	COG0069	glutamate synthase activity
CAB88_01800	COG0070	glutamate synthase
CAB88_01810	COG4555	ABC transporter
CAB88_01830	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CAB88_01835	COG0735	belongs to the Fur family
CAB88_01960	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CAB88_01985	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CAB88_02000	COG2766	serine protein kinase
CAB88_02025	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CAB88_02035	COG1585	Membrane protein implicated in regulation of membrane protease activity
CAB88_02040	COG2268	Band 7 protein
CAB88_02050	COG3290	protein histidine kinase activity
CAB88_02055	COG4565	transcriptional regulatory protein
CAB88_02060	COG2851	Citrate transporter
CAB88_02085	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CAB88_02090	COG3842	ATPase activity
CAB88_02095	COG1175	transmembrane transport
CAB88_02100	COG0395	ABC-type sugar transport system, permease component
CAB88_02110	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CAB88_02115	COG0745	RESPONSE REGULATOR receiver
CAB88_02120	COG5002	protein histidine kinase activity
CAB88_02130	COG4990	cell redox homeostasis
CAB88_02140	COG3290	protein histidine kinase activity
CAB88_02145	COG4565	transcriptional regulatory protein
CAB88_02150	COG3493	citrate carrier protein
CAB88_02155	COG0281	malic enzyme
CAB88_02165	COG0697	spore germination
CAB88_02170	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_02180	COG5002	protein histidine kinase activity
CAB88_02185	COG0745	RESPONSE REGULATOR receiver
CAB88_02195	COG0454	-acetyltransferase
CAB88_02195	COG0456	acetyltransferase
CAB88_02200	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CAB88_02205	COG3383	formate dehydrogenase (NAD+) activity
CAB88_02210	COG2427	Protein of unknown function (DUF1641)
CAB88_02225	COG0531	amino acid
CAB88_02230	COG0640	Transcriptional regulator
CAB88_02235	COG2217	Heavy metal translocating P-type atpase
CAB88_02240	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CAB88_02255	COG3227	Zinc metalloprotease (Elastase)
CAB88_02275	COG2720	vancomycin resistance protein
CAB88_02280	COG1316	TRANSCRIPTIONal
CAB88_02285	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_02290	COG0346	lactoylglutathione lyase activity
CAB88_02295	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_02300	COG1253	flavin adenine dinucleotide binding
CAB88_02305	COG1027	Aspartate ammonia-lyase
CAB88_02310	COG1620	l-lactate permease
CAB88_02330	COG3104	oligopeptide transport
CAB88_02335	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_02340	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_02345	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_02365	COG3344	reverse transcriptase
CAB88_02370	COG0156	8-amino-7-oxononanoate synthase activity
CAB88_02375	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB88_02385	COG4548	von Willebrand factor, type A
CAB88_02390	COG0714	Associated with various cellular activities
CAB88_02415	COG0531	amino acid
CAB88_02420	COG2188	Transcriptional regulator
CAB88_02425	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_02425	COG1263	PTS System
CAB88_02430	COG0366	Alpha amylase catalytic
CAB88_02450	COG0697	spore germination
CAB88_02460	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CAB88_02465	COG1115	amino acid carrier protein
CAB88_02470	COG1126	abc transporter atp-binding protein
CAB88_02475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_02480	COG0765	amino acid transport
CAB88_02485	COG0765	amino acid transport
CAB88_02490	COG0833	amino acid
CAB88_02505	COG1595	DNA-templated transcription, initiation
CAB88_02515	COG2378	regulation of single-species biofilm formation
CAB88_02520	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CAB88_02525	COG5002	protein histidine kinase activity
CAB88_02550	COG0659	secondary active sulfate transmembrane transporter activity
CAB88_02565	COG0747	negative chemotaxis
CAB88_02575	COG0601	transmembrane transport
CAB88_02580	COG4608	Belongs to the ABC transporter superfamily
CAB88_02590	COG2271	Major facilitator Superfamily
CAB88_02595	COG1846	Transcriptional regulator
CAB88_02600	COG0477	Major facilitator Superfamily
CAB88_02605	COG1609	Transcriptional regulator
CAB88_02610	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CAB88_02625	COG1172	Belongs to the binding-protein-dependent transport system permease family
CAB88_02630	COG1879	ABC-type sugar transport system periplasmic component
CAB88_02635	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CAB88_02655	COG1063	alcohol dehydrogenase
CAB88_02685	COG1396	sequence-specific DNA binding
CAB88_02725	COG5377	YqaJ viral recombinase family
CAB88_02730	COG3723	Recombinational DNA repair protein, rece pathway
CAB88_02745	COG1484	DNA-dependent DNA replication
CAB88_02785	COG3617	BRO family, N-terminal domain
CAB88_02810	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CAB88_02905	COG1388	LysM domain
CAB88_02905	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_02905	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_02925	COG1674	ftsk spoiiie
CAB88_02970	COG0840	transmembrane signaling receptor activity
CAB88_02975	COG3584	3D domain protein
CAB88_02975	COG1388	LysM domain
CAB88_02980	COG1476	TRANSCRIPTIONal
CAB88_03000	COG3104	oligopeptide transport
CAB88_03005	COG1114	Component of the transport system for branched-chain amino acids
CAB88_03020	COG1113	amino acid transport
CAB88_03025	COG2252	PERMEase
CAB88_03040	COG2153	protein acetylation
CAB88_03050	COG0475	glutathione-regulated potassium exporter activity
CAB88_03050	COG0569	domain protein
CAB88_03060	COG1845	cytochrome c oxidase, subunit III
CAB88_03065	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CAB88_03075	COG0833	amino acid
CAB88_03080	COG4990	cell redox homeostasis
CAB88_03095	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CAB88_03100	COG0697	spore germination
CAB88_03105	COG0531	amino acid
CAB88_03135	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CAB88_03140	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CAB88_03145	COG1918	ferrous iron import across plasma membrane
CAB88_03145	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CAB88_03150	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CAB88_03155	COG0573	inorganic phosphate transmembrane transporter activity
CAB88_03160	COG0581	inorganic phosphate transmembrane transporter activity
CAB88_03170	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CAB88_03295	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CAB88_03320	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CAB88_03325	COG1116	anion transmembrane transporter activity
CAB88_03330	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB88_03335	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CAB88_03340	COG0352	thiamine-phosphate diphosphorylase activity
CAB88_03345	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB88_03350	COG2104	thiamine diphosphate biosynthetic process
CAB88_03360	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CAB88_03365	COG0351	phosphomethylpyrimidine kinase
CAB88_03405	COG2205	protein histidine kinase activity
CAB88_03410	COG2814	Major facilitator Superfamily
CAB88_03415	COG1846	Transcriptional regulator
CAB88_03430	COG2252	PERMEase
CAB88_03435	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_03450	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CAB88_03455	COG1621	beta-fructofuranosidase activity
CAB88_03460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_03460	COG1263	PTS System
CAB88_03465	COG1609	Transcriptional regulator
CAB88_03515	COG0778	Nitroreductase
CAB88_03520	COG2719	SpoVR family
CAB88_03530	COG1414	Transcriptional regulator
CAB88_03550	COG0446	pyridine nucleotide-disulphide oxidoreductase
CAB88_03555	COG1937	Protein conserved in bacteria
CAB88_03560	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_03560	COG0425	Belongs to the sulfur carrier protein TusA family
CAB88_03565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_03565	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_03570	COG0425	Belongs to the sulfur carrier protein TusA family
CAB88_03575	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_03585	COG2210	Belongs to the sulfur carrier protein TusA family
CAB88_03590	COG0730	response to heat
CAB88_03600	COG1316	TRANSCRIPTIONal
CAB88_03605	COG0604	alcohol dehydrogenase
CAB88_03610	COG1283	sodium-dependent phosphate transmembrane transporter activity
CAB88_03630	COG3711	transcriptional antiterminator
CAB88_03630	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_03635	COG1447	Phosphotransferase system cellobiose-specific component IIA
CAB88_03640	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CAB88_03660	COG1388	LysM domain
CAB88_03660	COG3584	3D domain protein
CAB88_03665	COG0577	efflux transmembrane transporter activity
CAB88_03670	COG1136	(ABC) transporter
CAB88_03680	COG5522	Integral membrane protein (intg_mem_TP0381)
CAB88_03695	COG1114	Component of the transport system for branched-chain amino acids
CAB88_03700	COG3546	catalase activity
CAB88_03735	COG0586	Pfam SNARE associated Golgi protein
CAB88_03770	COG0531	amino acid
CAB88_03775	COG0475	glutathione-regulated potassium exporter activity
CAB88_03785	COG1737	Transcriptional regulator
CAB88_03795	COG1263	PTS System
CAB88_03795	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_03805	COG2259	Doxx family
CAB88_03825	COG1522	sequence-specific DNA binding
CAB88_03830	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CAB88_03830	COG0165	Argininosuccinate lyase
CAB88_03835	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_03845	COG2076	Multidrug Resistance protein
CAB88_03855	COG1309	transcriptional regulator
CAB88_03860	COG2814	Major facilitator Superfamily
CAB88_03865	COG1733	regulation of RNA biosynthetic process
CAB88_03880	COG4533	DNA binding
CAB88_03885	COG2211	Major facilitator Superfamily
CAB88_03895	COG0693	protein deglycase activity
CAB88_03900	COG0753	catalase activity
CAB88_03900	COG0693	protein deglycase activity
CAB88_03910	COG0531	amino acid
CAB88_03925	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_03945	COG1132	(ABC) transporter
CAB88_03950	COG1132	(ABC) transporter
CAB88_03960	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_03965	COG0765	amino acid transport
CAB88_03970	COG1126	abc transporter atp-binding protein
CAB88_03985	COG0189	ligase activity
CAB88_04020	COG0028	Belongs to the TPP enzyme family
CAB88_04025	COG3527	Alpha-acetolactate decarboxylase
CAB88_04040	COG0561	phosphatase activity
CAB88_04050	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_04050	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_04055	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CAB88_04060	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_04075	COG0659	secondary active sulfate transmembrane transporter activity
CAB88_04080	COG2244	polysaccharide biosynthetic process
CAB88_04105	COG1024	Enoyl-CoA hydratase
CAB88_04125	COG1363	Peptidase, m42
CAB88_04165	COG0601	transmembrane transport
CAB88_04170	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CAB88_04175	COG0444	Belongs to the ABC transporter superfamily
CAB88_04180	COG4608	Belongs to the ABC transporter superfamily
CAB88_04210	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_04235	COG0477	Major facilitator Superfamily
CAB88_04240	COG3290	protein histidine kinase activity
CAB88_04245	COG4565	transcriptional regulatory protein
CAB88_04250	COG3181	Tripartite tricarboxylate transporter family receptor
CAB88_04255	COG0494	nUDIX hydrolase
CAB88_04270	COG0305	Participates in initiation and elongation during chromosome replication
CAB88_04310	COG0477	Major facilitator Superfamily
CAB88_04345	COG1073	alpha beta
CAB88_04400	COG1183	phosphatidylcholine synthase activity
CAB88_04415	COG2814	Major facilitator Superfamily
CAB88_04420	COG0640	Transcriptional regulator
CAB88_04435	COG2376	Dihydroxyacetone kinase
CAB88_04445	COG2376	Dihydroxyacetone kinase
CAB88_04495	COG0457	Tetratricopeptide repeat
CAB88_04505	COG2373	Large extracellular alpha-helical protein
CAB88_04540	COG0596	Alpha beta hydrolase
CAB88_04570	COG3237	CsbD-like
CAB88_04600	COG1191	sigma factor activity
CAB88_04610	COG2208	phosphoserine phosphatase activity
CAB88_04615	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CAB88_04660	COG3344	reverse transcriptase
CAB88_04670	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CAB88_04690	COG0420	3'-5' exonuclease activity
CAB88_04695	COG4717	serine-type aminopeptidase activity
CAB88_04715	COG1280	lysine exporter protein (LysE YggA)
CAB88_04720	COG0346	lactoylglutathione lyase activity
CAB88_04725	COG0346	lactoylglutathione lyase activity
CAB88_04735	COG0457	Tetratricopeptide repeat
CAB88_04745	COG2267	carboxylic ester hydrolase activity
CAB88_04770	COG2140	Oxalate decarboxylase
CAB88_04775	COG3620	sequence-specific DNA binding
CAB88_04780	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CAB88_04785	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CAB88_04795	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CAB88_04800	COG1695	Transcriptional regulator
CAB88_04815	COG1595	DNA-templated transcription, initiation
CAB88_04830	COG3973	AAA domain
CAB88_04865	COG4980	gas vesicle protein
CAB88_04870	COG0537	adenosine 5'-monophosphoramidase activity
CAB88_04880	COG1131	(ABC) transporter
CAB88_04885	COG4473	ABC transporter
CAB88_04930	COG1309	transcriptional regulator
CAB88_04940	COG3402	PFAM membrane-flanked domain
CAB88_04945	COG3428	Bacterial PH domain
CAB88_04990	COG0697	spore germination
CAB88_04995	COG3402	PFAM membrane-flanked domain
CAB88_05000	COG3428	Bacterial PH domain
CAB88_05005	COG2329	Antibiotic biosynthesis monooxygenase
CAB88_05010	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_05060	COG1309	transcriptional regulator
CAB88_05065	COG1511	domain protein
CAB88_05085	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_05090	COG1609	Transcriptional regulator
CAB88_05100	COG1234	tRNA 3'-trailer cleavage
CAB88_05105	COG0095	Lipoate-protein ligase
CAB88_05115	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_05125	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CAB88_05135	COG4208	sulfate ABC transporter
CAB88_05155	COG1408	metallophosphoesterase
CAB88_05160	COG1078	dGTPase activity
CAB88_05170	COG1595	DNA-templated transcription, initiation
CAB88_05175	COG3708	Transcriptional regulator
CAB88_05175	COG2207	Transcriptional regulator
CAB88_05180	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_05190	COG2205	protein histidine kinase activity
CAB88_05195	COG0745	RESPONSE REGULATOR receiver
CAB88_05215	COG0501	Belongs to the peptidase M48B family
CAB88_05220	COG0840	transmembrane signaling receptor activity
CAB88_05230	COG3693	PFAM glycoside hydrolase, family 10
CAB88_05240	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CAB88_05245	COG2224	Isocitrate lyase
CAB88_05260	COG1278	Cold shock
CAB88_05280	COG0398	Pfam SNARE associated Golgi protein
CAB88_05300	COG0202	RNA polymerase activity
CAB88_05340	COG0179	Fumarylacetoacetate (FAA) hydrolase
CAB88_05365	COG0367	asparagine synthase
CAB88_05375	COG0753	catalase activity
CAB88_05380	COG0004	ammonium transporteR
CAB88_05410	COG2996	Protein conserved in bacteria
CAB88_05425	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_05440	COG0561	phosphatase activity
CAB88_05465	COG2267	carboxylic ester hydrolase activity
CAB88_05480	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB88_05485	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CAB88_05490	COG5504	Zn-dependent protease
CAB88_05500	COG0180	Tryptophanyl-tRNA synthetase
CAB88_05515	COG4166	transmembrane transport
CAB88_05520	COG0601	transmembrane transport
CAB88_05525	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CAB88_05530	COG0444	Belongs to the ABC transporter superfamily
CAB88_05535	COG4608	Belongs to the ABC transporter superfamily
CAB88_05540	COG0534	Mate efflux family protein
CAB88_05545	COG4166	transmembrane transport
CAB88_05565	COG1393	Belongs to the ArsC family
CAB88_05570	COG0861	Integral membrane protein TerC family
CAB88_05580	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB88_05600	COG1164	Oligoendopeptidase f
CAB88_05615	COG2346	COG2346, Truncated hemoglobins
CAB88_05620	COG4116	CYTH
CAB88_05630	COG2357	RelA SpoT domain protein
CAB88_05640	COG0564	pseudouridine synthase activity
CAB88_05655	COG0772	Belongs to the SEDS family
CAB88_05660	COG1216	Glycosyl transferase, family 2
CAB88_05680	COG0463	Glycosyl transferase, family 2
CAB88_05680	COG0457	Tetratricopeptide repeat
CAB88_05700	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CAB88_05715	COG1091	dTDP-4-dehydrorhamnose reductase activity
CAB88_05760	COG2153	protein acetylation
CAB88_05770	COG2382	esterase
CAB88_05790	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CAB88_05805	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CAB88_05805	COG0512	Glutamine amidotransferase of anthranilate synthase
CAB88_05840	COG1620	l-lactate permease
CAB88_05845	COG5634	Uncharacterized conserved protein (DUF2278)
CAB88_05860	COG4640	response to antibiotic
CAB88_05890	COG2226	methyltransferase
CAB88_05910	COG0508	dehydrogenase complex catalyzes the overall conversion of
CAB88_05920	COG1476	TRANSCRIPTIONal
CAB88_05995	COG1686	Belongs to the peptidase S11 family
CAB88_06000	COG0681	Belongs to the peptidase S26 family
CAB88_06035	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_06045	COG1176	ABC-type spermidine putrescine transport system, permease component I
CAB88_06050	COG1177	transmembrane transport
CAB88_06055	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CAB88_06065	COG2409	Drug exporters of the RND superfamily
CAB88_06075	COG0564	pseudouridine synthase activity
CAB88_06085	COG2340	Cysteine-rich secretory protein family
CAB88_06090	COG0247	lactate metabolic process
CAB88_06095	COG0277	FAD linked oxidase domain protein
CAB88_06100	COG3835	regulator
CAB88_06110	COG0745	RESPONSE REGULATOR receiver
CAB88_06115	COG5002	protein histidine kinase activity
CAB88_06120	COG2186	Transcriptional regulator
CAB88_06140	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CAB88_06150	COG2116	formate transmembrane transporter activity
CAB88_06155	COG0861	Integral membrane protein TerC family
CAB88_06160	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CAB88_06170	COG2030	dehydratase
CAB88_06190	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_06195	COG3243	poly(R)-hydroxyalkanoic acid synthase
CAB88_06205	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CAB88_06225	COG1840	ABC-type Fe3 transport system, periplasmic component
CAB88_06230	COG3842	ATPase activity
CAB88_06255	COG1349	DNA-binding transcription factor activity
CAB88_06270	COG0235	Class ii aldolase
CAB88_06280	COG2861	carbohydrate metabolic process
CAB88_06290	COG3852	Histidine kinase
CAB88_06295	COG1846	Transcriptional regulator
CAB88_06305	COG2318	DinB family
CAB88_06315	COG5002	protein histidine kinase activity
CAB88_06325	COG0720	synthase
CAB88_06340	COG4873	Protein conserved in bacteria
CAB88_06380	COG1780	Probably involved in ribonucleotide reductase function
CAB88_06385	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CAB88_06390	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CAB88_06395	COG1725	Transcriptional regulator
CAB88_06400	COG1131	(ABC) transporter
CAB88_06410	COG1131	(ABC) transporter
CAB88_06430	COG1522	sequence-specific DNA binding
CAB88_06440	COG1335	isochorismatase
CAB88_06450	COG1619	proteins homologs of microcin C7 resistance protein MccF
CAB88_06455	COG2070	2-Nitropropane dioxygenase
CAB88_06460	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CAB88_06470	COG1696	Membrane protein involved in D-alanine export
CAB88_06495	COG0716	FMN binding
CAB88_06555	COG1846	Transcriptional regulator
CAB88_06570	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CAB88_06575	COG4709	membrane
CAB88_06580	COG3874	Sporulation protein YtfJ
CAB88_06610	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB88_06615	COG0028	Belongs to the TPP enzyme family
CAB88_06620	COG0440	acetolactate synthase activity
CAB88_06695	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CAB88_06710	COG1183	phosphatidylcholine synthase activity
CAB88_06715	COG1368	sulfuric ester hydrolase activity
CAB88_06725	COG0019	diaminopimelate decarboxylase activity
CAB88_06745	COG0529	Catalyzes the synthesis of activated sulfate
CAB88_06750	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CAB88_06770	COG1648	precorrin-2 dehydrogenase activity
CAB88_06780	COG0733	neurotransmitter:sodium symporter activity
CAB88_06800	COG1757	Na H antiporter
CAB88_06815	COG4758	membrane
CAB88_06820	COG4585	Histidine kinase
CAB88_06825	COG2197	response regulator
CAB88_06835	COG1114	Component of the transport system for branched-chain amino acids
CAB88_06845	COG2226	methyltransferase
CAB88_06890	COG0730	response to heat
CAB88_06895	COG0306	phosphate transporter
CAB88_06900	COG1392	Phosphate transport regulator
CAB88_06905	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_06920	COG3852	Histidine kinase
CAB88_06925	COG1801	Protein of unknown function DUF72
CAB88_06935	COG0582	viral genome integration into host DNA
CAB88_06940	COG5002	protein histidine kinase activity
CAB88_06960	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CAB88_06960	COG0392	lysyltransferase activity
CAB88_06975	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CAB88_06980	COG1686	Belongs to the peptidase S11 family
CAB88_06985	COG2715	membrane protein required for spore maturation
CAB88_06990	COG0700	Nucleoside recognition
CAB88_06995	COG1187	pseudouridine synthase activity
CAB88_07005	COG1333	cytochrome c biogenesis protein
CAB88_07010	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CAB88_07015	COG0745	RESPONSE REGULATOR receiver
CAB88_07020	COG5002	protein histidine kinase activity
CAB88_07025	COG2096	Adenosyltransferase
CAB88_07040	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CAB88_07045	COG1141	Ferredoxin
CAB88_07055	COG0514	ATP-dependent DNA helicase (RecQ)
CAB88_07060	COG1266	CAAX protease self-immunity
CAB88_07070	COG1408	metallophosphoesterase
CAB88_07075	COG0789	Transcriptional regulator
CAB88_07085	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CAB88_07105	COG0492	ferredoxin-NADP+ reductase activity
CAB88_07110	COG0252	asparaginase activity
CAB88_07180	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CAB88_07195	COG0142	geranyltranstransferase activity
CAB88_07205	COG0142	geranyltranstransferase activity
CAB88_07230	COG0457	Tetratricopeptide repeat
CAB88_07250	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CAB88_07255	COG2010	Cytochrome c
CAB88_07255	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CAB88_07260	COG4347	Protein of unknown function (DUF1405)
CAB88_07275	COG2738	Putative neutral zinc metallopeptidase
CAB88_07285	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_07290	COG1694	Mazg nucleotide pyrophosphohydrolase
CAB88_07310	COG0438	transferase activity, transferring glycosyl groups
CAB88_07350	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CAB88_07350	COG1199	ATP-dependent helicase activity
CAB88_07370	COG3935	DnaD domain protein
CAB88_07375	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CAB88_07385	COG4499	WXG100 protein secretion system (Wss), protein YukC
CAB88_07385	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_07445	COG0116	Belongs to the methyltransferase superfamily
CAB88_07455	COG1199	ATP-dependent helicase activity
CAB88_07460	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CAB88_07470	COG0024	Methionine aminopeptidase
CAB88_07480	COG2233	PERMEase
CAB88_07485	COG2311	Membrane
CAB88_07495	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CAB88_07505	COG0456	acetyltransferase
CAB88_07555	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_07570	COG3944	biosynthesis protein
CAB88_07580	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CAB88_07595	COG1215	transferase activity, transferring glycosyl groups
CAB88_07600	COG0438	transferase activity, transferring glycosyl groups
CAB88_07615	COG0454	-acetyltransferase
CAB88_07635	COG0328	RNA-DNA hybrid ribonuclease activity
CAB88_07670	COG3403	YqcI/YcgG family
CAB88_07675	COG1280	lysine exporter protein (LysE YggA)
CAB88_07695	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CAB88_07700	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CAB88_07710	COG0475	glutathione-regulated potassium exporter activity
CAB88_07715	COG0789	Transcriptional regulator
CAB88_07715	COG4978	Transcriptional regulator
CAB88_07725	COG2323	membrane
CAB88_07730	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CAB88_07790	COG1923	regulation of RNA biosynthetic process
CAB88_07800	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CAB88_07805	COG1360	Flagellar Motor Protein
CAB88_07810	COG2201	protein-glutamate methylesterase activity
CAB88_07815	COG0643	Histidine kinase
CAB88_07815	COG2198	Histidine kinase
CAB88_07820	COG1776	CheC inhibitor of MCP methylation
CAB88_07820	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CAB88_07835	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CAB88_07855	COG1256	bacterial-type flagellum assembly
CAB88_07860	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CAB88_07880	COG1815	bacterial-type flagellum-dependent cell motility
CAB88_07885	COG1558	bacterial-type flagellum-dependent cell motility
CAB88_07890	COG1677	Flagellar hook-basal body complex protein FliE
CAB88_07895	COG1766	The M ring may be actively involved in energy transduction
CAB88_07900	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CAB88_07910	COG1157	protein secretion by the type III secretion system
CAB88_07930	COG1749	Flagellar hook protein flgE
CAB88_07945	COG0784	Response regulator, receiver
CAB88_07945	COG0835	chemotaxis
CAB88_07955	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CAB88_07960	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CAB88_07965	COG0741	lytic transglycosylase activity
CAB88_07975	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CAB88_07980	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CAB88_07980	COG1776	CheC inhibitor of MCP methylation
CAB88_07990	COG1338	Plays a role in the flagellum-specific transport system
CAB88_07995	COG1987	bacterial-type flagellum assembly
CAB88_08005	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CAB88_08010	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CAB88_08015	COG1419	protein localization to endoplasmic reticulum
CAB88_08020	COG4786	Flagellar basal body rod
CAB88_08030	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CAB88_08065	COG2329	Antibiotic biosynthesis monooxygenase
CAB88_08100	COG3842	ATPase activity
CAB88_08110	COG1177	transmembrane transport
CAB88_08155	COG0406	alpha-ribazole phosphatase activity
CAB88_08185	COG0367	asparagine synthase
CAB88_08215	COG1802	Transcriptional regulator
CAB88_08220	COG0697	spore germination
CAB88_08230	COG0523	cobalamin synthesis protein
CAB88_08240	COG0701	Predicted permease
CAB88_08255	COG1757	Na H antiporter
CAB88_08260	COG0789	Transcriptional regulator
CAB88_08285	COG0534	Mate efflux family protein
CAB88_08290	COG3340	Belongs to the peptidase S51 family
CAB88_08310	COG0785	Cytochrome C biogenesis protein
CAB88_08315	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_08325	COG0457	Tetratricopeptide repeat
CAB88_08345	COG2733	membrane
CAB88_08385	COG1131	(ABC) transporter
CAB88_08400	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB88_08405	COG0528	UMP kinase activity
CAB88_08415	COG1027	Aspartate ammonia-lyase
CAB88_08420	COG0281	malic enzyme
CAB88_08425	COG4191	Histidine kinase
CAB88_08430	COG0784	Response regulator, receiver
CAB88_08435	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CAB88_08505	COG1695	Transcriptional regulator
CAB88_08515	COG0477	Major facilitator Superfamily
CAB88_08530	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CAB88_08535	COG2223	nitrite transmembrane transporter activity
CAB88_08540	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CAB88_08560	COG0733	neurotransmitter:sodium symporter activity
CAB88_08570	COG5566	PFAM Mor transcription activator
CAB88_08575	COG2323	membrane
CAB88_08605	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CAB88_08615	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB88_08620	COG0028	Belongs to the TPP enzyme family
CAB88_08640	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CAB88_08665	COG2814	Major facilitator Superfamily
CAB88_08670	COG3384	dioxygenase
CAB88_08680	COG3279	Response regulator of the LytR AlgR family
CAB88_08685	COG0427	acetyl-CoA hydrolase
CAB88_08705	COG2814	Major facilitator Superfamily
CAB88_08710	COG1309	transcriptional regulator
CAB88_08715	COG4166	transmembrane transport
CAB88_08720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_08745	COG1914	H( )-stimulated, divalent metal cation uptake system
CAB88_08760	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CAB88_08765	COG0531	amino acid
CAB88_08795	COG2309	aminopeptidase activity
CAB88_08810	COG0456	acetyltransferase
CAB88_08825	COG1266	CAAX protease self-immunity
CAB88_08830	COG1309	transcriptional regulator
CAB88_08835	COG2390	Transcriptional regulator
CAB88_08845	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_08850	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CAB88_08860	COG4846	Membrane protein involved in cytochrome C biogenesis
CAB88_08880	COG0583	DNA-binding transcription factor activity
CAB88_08895	COG0006	proline dipeptidase activity
CAB88_08905	COG2132	Multicopper oxidase
CAB88_08940	COG1114	Component of the transport system for branched-chain amino acids
CAB88_08950	COG1276	copper resistance
CAB88_08950	COG2372	response to copper ion
CAB88_08955	COG4549	nuclear export factor GLE1
CAB88_08960	COG0697	spore germination
CAB88_08965	COG0583	DNA-binding transcription factor activity
CAB88_08970	COG1959	2 iron, 2 sulfur cluster binding
CAB88_08975	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CAB88_08980	COG0778	Nitroreductase
CAB88_08995	COG1396	sequence-specific DNA binding
CAB88_09025	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_09100	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_09100	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_09190	COG2002	toxin-antitoxin pair type II binding
CAB88_09225	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CAB88_09335	COG4824	toxin secretion phage lysis holin
CAB88_09425	COG0628	permease
CAB88_09435	COG1231	oxidoreductase activity
CAB88_09445	COG0523	cobalamin synthesis protein
CAB88_09455	COG0411	ABC transporter
CAB88_09475	COG0583	DNA-binding transcription factor activity
CAB88_09485	COG1942	4-Oxalocrotonate Tautomerase
CAB88_09505	COG1271	oxidase subunit
CAB88_09510	COG1294	oxidase, subunit
CAB88_09515	COG4988	ABC transporter
CAB88_09520	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CAB88_09530	COG1216	Glycosyl transferase, family 2
CAB88_09570	COG1686	Belongs to the peptidase S11 family
CAB88_09585	COG0791	NLP P60 protein
CAB88_09585	COG1388	LysM domain
CAB88_09595	COG1132	(ABC) transporter
CAB88_09600	COG0745	RESPONSE REGULATOR receiver
CAB88_09605	COG5002	protein histidine kinase activity
CAB88_09615	COG0300	oxidoreductase activity
CAB88_09630	COG0726	polysaccharide deacetylase
CAB88_09650	COG0460	homoserine dehydrogenase
CAB88_09675	COG1316	TRANSCRIPTIONal
CAB88_09685	COG0745	RESPONSE REGULATOR receiver
CAB88_09690	COG5002	protein histidine kinase activity
CAB88_09695	COG0726	polysaccharide deacetylase
CAB88_09705	COG1285	pathogenesis
CAB88_09710	COG1247	-acetyltransferase
CAB88_09720	COG4264	IucA IucC family
CAB88_09725	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_09740	COG1082	Xylose isomerase domain protein TIM barrel
CAB88_09750	COG2814	Major facilitator Superfamily
CAB88_09755	COG1279	arginine transmembrane transporter activity
CAB88_09760	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_09770	COG1752	Esterase of the alpha-beta hydrolase superfamily
CAB88_09805	COG0577	efflux transmembrane transporter activity
CAB88_09810	COG2002	toxin-antitoxin pair type II binding
CAB88_09815	COG1404	Belongs to the peptidase S8 family
CAB88_09820	COG0640	Transcriptional regulator
CAB88_09825	COG0667	Aldo Keto reductase
CAB88_09830	COG2814	Major facilitator Superfamily
CAB88_09855	COG0840	transmembrane signaling receptor activity
CAB88_09875	COG3949	Membrane
CAB88_09880	COG0783	Belongs to the Dps family
CAB88_09895	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB88_09905	COG1231	oxidoreductase activity
CAB88_09910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_09915	COG4989	oxidoreductase activity
CAB88_09920	COG0523	cobalamin synthesis protein
CAB88_09925	COG0456	acetyltransferase
CAB88_09930	COG0803	Belongs to the bacterial solute-binding protein 9 family
CAB88_09940	COG0702	epimerase
CAB88_09960	COG4166	transmembrane transport
CAB88_09985	COG5337	Spore coat protein CotH
CAB88_09990	COG1051	belongs to the nudix hydrolase family
CAB88_09995	COG0586	Pfam SNARE associated Golgi protein
CAB88_10000	COG2244	polysaccharide biosynthetic process
CAB88_10010	COG0701	Predicted permease
CAB88_10015	COG3689	TIGRFAM TIGR03943 family protein
CAB88_10020	COG1607	acyl-coa hydrolase
CAB88_10030	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB88_10045	COG0702	epimerase
CAB88_10050	COG2839	Protein conserved in bacteria
CAB88_10055	COG1253	flavin adenine dinucleotide binding
CAB88_10080	COG1114	Component of the transport system for branched-chain amino acids
CAB88_10085	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CAB88_10105	COG0860	N-Acetylmuramoyl-L-alanine amidase
CAB88_10120	COG1876	peptidase activity
CAB88_10135	COG2211	Major facilitator Superfamily
CAB88_10160	COG0561	phosphatase activity
CAB88_10165	COG1846	Transcriptional regulator
CAB88_10170	COG2814	Major facilitator Superfamily
CAB88_10180	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CAB88_10200	COG1819	glycosyl
CAB88_10205	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_10210	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_10240	COG0456	acetyltransferase
CAB88_10290	COG3874	Sporulation protein YtfJ
CAB88_10315	COG2226	methyltransferase
CAB88_10335	COG1082	Xylose isomerase domain protein TIM barrel
CAB88_10340	COG0346	lactoylglutathione lyase activity
CAB88_10350	COG0604	alcohol dehydrogenase
CAB88_10355	COG1595	DNA-templated transcription, initiation
CAB88_10370	COG0426	domain, Protein
CAB88_10370	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CAB88_10380	COG0386	Belongs to the glutathione peroxidase family
CAB88_10385	COG1305	Transglutaminase-like
CAB88_10390	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CAB88_10395	COG0714	Associated with various cellular activities
CAB88_10400	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CAB88_10405	COG1140	nitrate reductase beta subunit
CAB88_10410	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CAB88_10415	COG2181	nitrate reductase activity
CAB88_10420	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB88_10425	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CAB88_10430	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CAB88_10435	COG0303	'Molybdopterin
CAB88_10440	COG0314	molybdopterin synthase activity
CAB88_10450	COG2223	nitrite transmembrane transporter activity
CAB88_10470	COG1648	precorrin-2 dehydrogenase activity
CAB88_10480	COG1587	Uroporphyrinogen-III synthase
CAB88_10480	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CAB88_10485	COG2146	nitrite reductase [NAD(P)H] activity
CAB88_10490	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CAB88_10495	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CAB88_10530	COG2359	stage V sporulation protein S
CAB88_10555	COG1418	mRNA catabolic process
CAB88_10560	COG0488	(ABC) transporter
CAB88_10575	COG0629	single-stranded DNA binding
CAB88_10590	COG1413	lyase activity
CAB88_10605	COG2521	methyltransferase
CAB88_10605	COG2136	Putative SAM-dependent methyltransferase
CAB88_10610	COG0018	arginyl-trna synthetase
CAB88_10650	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CAB88_10660	COG0017	Asparaginyl-tRNA synthetase
CAB88_10680	COG1674	ftsk spoiiie
CAB88_10765	COG0733	neurotransmitter:sodium symporter activity
CAB88_10790	COG2610	gluconate transmembrane transporter activity
CAB88_10800	COG1794	racemase activity, acting on amino acids and derivatives
CAB88_10810	COG0456	acetyltransferase
CAB88_10820	COG3655	Transcriptional regulator
CAB88_10825	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CAB88_10835	COG1131	(ABC) transporter
CAB88_10840	COG4473	ABC transporter
CAB88_10850	COG0546	phosphoglycolate phosphatase activity
CAB88_10865	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_10880	COG0768	penicillin binding
CAB88_10890	COG0204	Acyl-transferase
CAB88_10895	COG1272	protein, Hemolysin III
CAB88_10905	COG0805	protein transport
CAB88_10920	COG1307	EDD domain protein, DegV family
CAB88_10930	COG1999	signal sequence binding
CAB88_10935	COG0071	Belongs to the small heat shock protein (HSP20) family
CAB88_10940	COG0367	asparagine synthase
CAB88_10955	COG0860	N-Acetylmuramoyl-L-alanine amidase
CAB88_10960	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_10965	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB88_10985	COG1335	isochorismatase
CAB88_10990	COG1051	belongs to the nudix hydrolase family
CAB88_10995	COG0668	transmembrane transport
CAB88_11000	COG2203	Gaf domain
CAB88_11000	COG4585	Histidine kinase
CAB88_11005	COG2197	response regulator
CAB88_11010	COG1737	Transcriptional regulator
CAB88_11015	COG0384	phenazine biosynthesis protein PhzF
CAB88_11020	COG1064	alcohol dehydrogenase
CAB88_11060	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CAB88_11095	COG1125	glycine betaine transport
CAB88_11095	COG0517	IMP dehydrogenase activity
CAB88_11100	COG1174	glycine betaine transport
CAB88_11135	COG1253	flavin adenine dinucleotide binding
CAB88_11140	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_11145	COG5506	Protein of unknown function (DUF1694)
CAB88_11165	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CAB88_11170	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CAB88_11175	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CAB88_11180	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CAB88_11185	COG0456	acetyltransferase
CAB88_11190	COG3829	transcription factor binding
CAB88_11195	COG1509	lysine 2,3-aminomutase activity
CAB88_11230	COG3064	Membrane
CAB88_11230	COG4991	sh3 domain protein
CAB88_11230	COG0515	serine threonine protein kinase
CAB88_11240	COG0671	phosphoesterase, PA-phosphatase related
CAB88_11245	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CAB88_11250	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_11330	COG0300	oxidoreductase activity
CAB88_11350	COG4499	WXG100 protein secretion system (Wss), protein YukC
CAB88_11350	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_11360	COG2814	Major facilitator Superfamily
CAB88_11365	COG4841	protein insertion into membrane
CAB88_11370	COG0372	Belongs to the citrate synthase family
CAB88_11375	COG2079	MmgE PrpD family protein
CAB88_11380	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CAB88_11385	COG1960	acyl-CoA dehydrogenase activity
CAB88_11390	COG2084	Dehydrogenase
CAB88_11400	COG1280	lysine exporter protein (LysE YggA)
CAB88_11405	COG1024	Enoyl-CoA hydratase
CAB88_11420	COG0420	3'-5' exonuclease activity
CAB88_11425	COG0419	ATPase involved in DNA repair
CAB88_11450	COG2223	nitrite transmembrane transporter activity
CAB88_11460	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_11465	COG1169	isochorismate synthase
CAB88_11470	COG1021	2,3-dihydroxybenzoate-AMP ligase
CAB88_11475	COG3433	isochorismatase activity
CAB88_11475	COG1535	isochorismatase
CAB88_11480	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB88_11485	COG3251	PFAM MbtH domain protein
CAB88_11490	COG2814	Major facilitator Superfamily
CAB88_11505	COG0776	regulation of translation
CAB88_11515	COG2318	DinB family
CAB88_11525	COG1115	amino acid carrier protein
CAB88_11545	COG1187	pseudouridine synthase activity
CAB88_11550	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CAB88_11555	COG1136	(ABC) transporter
CAB88_11565	COG2814	Major facilitator Superfamily
CAB88_11580	COG0028	Belongs to the TPP enzyme family
CAB88_11615	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB88_11630	COG1846	Transcriptional regulator
CAB88_11640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_11675	COG1247	-acetyltransferase
CAB88_11715	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_11745	COG0583	DNA-binding transcription factor activity
CAB88_11750	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CAB88_11770	COG0583	DNA-binding transcription factor activity
CAB88_11775	COG2258	MOSC domain
CAB88_11790	COG1132	(ABC) transporter
CAB88_11795	COG1132	(ABC) transporter
CAB88_11850	COG0582	viral genome integration into host DNA
CAB88_11880	COG5484	DNA packaging
CAB88_11895	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_11925	COG1396	sequence-specific DNA binding
CAB88_11960	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CAB88_11965	COG1595	DNA-templated transcription, initiation
CAB88_11995	COG1649	PFAM Uncharacterised BCR, COG1649
CAB88_12020	COG2971	BadF BadG BcrA BcrD
CAB88_12040	COG1846	Transcriptional regulator
CAB88_12055	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_12115	COG0500	methyltransferase
CAB88_12115	COG3615	Tellurite resistance protein tehB
CAB88_12125	COG2226	methyltransferase
CAB88_12130	COG3961	Belongs to the TPP enzyme family
CAB88_12135	COG1846	Transcriptional regulator
CAB88_12185	COG2195	Cleaves the N-terminal amino acid of tripeptides
CAB88_12220	COG2002	toxin-antitoxin pair type II binding
CAB88_12230	COG0730	response to heat
CAB88_12235	COG0110	maltose O-acetyltransferase activity
CAB88_12240	COG1686	Belongs to the peptidase S11 family
CAB88_12255	COG2814	Major facilitator Superfamily
CAB88_12295	COG1115	amino acid carrier protein
CAB88_12300	COG2066	Belongs to the glutaminase family
CAB88_12305	COG4191	Histidine kinase
CAB88_12310	COG0784	Response regulator, receiver
CAB88_12320	COG0697	spore germination
CAB88_12325	COG0531	amino acid
CAB88_12335	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CAB88_12340	COG0531	amino acid
CAB88_12345	COG0322	excinuclease ABC activity
CAB88_12370	COG2207	Transcriptional regulator
CAB88_12395	COG5002	protein histidine kinase activity
CAB88_12405	COG2267	carboxylic ester hydrolase activity
CAB88_12470	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_12485	COG0768	penicillin binding
CAB88_12490	COG1595	DNA-templated transcription, initiation
CAB88_12500	COG0768	penicillin binding
CAB88_12520	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_12525	COG1408	metallophosphoesterase
CAB88_12535	COG1131	(ABC) transporter
CAB88_12545	COG1309	transcriptional regulator
CAB88_12560	COG1960	acyl-CoA dehydrogenase activity
CAB88_12565	COG0439	Biotin carboxylase
CAB88_12570	COG0511	ligase activity, forming carbon-carbon bonds
CAB88_12575	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CAB88_12580	COG1024	Enoyl-CoA hydratase
CAB88_12585	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CAB88_12590	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CAB88_12620	COG1686	Belongs to the peptidase S11 family
CAB88_12650	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CAB88_12665	COG3227	Zinc metalloprotease (Elastase)
CAB88_12670	COG2207	Transcriptional regulator
CAB88_12700	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CAB88_12710	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_12770	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_12780	COG2368	4-hydroxyphenylacetate
CAB88_12795	COG1063	alcohol dehydrogenase
CAB88_12805	COG2323	membrane
CAB88_12815	COG0693	protein deglycase activity
CAB88_12825	COG3386	PFAM SMP-30 Gluconolaconase
CAB88_12835	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
CAB88_12840	COG3773	Cell wall hydrolase
CAB88_12850	COG0745	RESPONSE REGULATOR receiver
CAB88_12855	COG2205	protein histidine kinase activity
CAB88_12895	COG1136	(ABC) transporter
CAB88_12900	COG0577	efflux transmembrane transporter activity
CAB88_12920	COG0460	homoserine dehydrogenase
CAB88_12925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_12935	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CAB88_12960	COG0582	viral genome integration into host DNA
CAB88_13015	COG1484	DNA-dependent DNA replication
CAB88_13120	COG0582	viral genome integration into host DNA
CAB88_13155	COG5484	DNA packaging
CAB88_13170	COG0740	serine-type endopeptidase activity
CAB88_13230	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_13300	COG2124	cytochrome p450
CAB88_13340	COG0561	phosphatase activity
CAB88_13345	COG5002	protein histidine kinase activity
CAB88_13360	COG1819	glycosyl
CAB88_13365	COG1794	racemase activity, acting on amino acids and derivatives
CAB88_13390	COG2205	protein histidine kinase activity
CAB88_13465	COG0604	alcohol dehydrogenase
CAB88_13470	COG0671	phosphoesterase, PA-phosphatase related
CAB88_13535	COG2814	Major facilitator Superfamily
CAB88_13555	COG0584	glycerophosphoryl diester phosphodiesterase
CAB88_13575	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_13580	COG0697	spore germination
CAB88_13625	COG2223	nitrite transmembrane transporter activity
CAB88_13640	COG0592	DNA-directed DNA polymerase activity
CAB88_13690	COG3878	Protein conserved in bacteria
CAB88_13720	COG4667	esterase of the alpha-beta hydrolase superfamily
CAB88_13760	COG0322	excinuclease ABC activity
CAB88_13800	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB88_13830	COG0745	RESPONSE REGULATOR receiver
CAB88_13835	COG5002	protein histidine kinase activity
CAB88_13850	COG1522	sequence-specific DNA binding
CAB88_13870	COG1136	(ABC) transporter
CAB88_13875	COG0577	efflux transmembrane transporter activity
CAB88_13880	COG1073	alpha beta
CAB88_13890	COG0076	glutamate decarboxylase activity
CAB88_13905	COG1523	belongs to the glycosyl hydrolase 13 family
CAB88_13910	COG3227	Zinc metalloprotease (Elastase)
CAB88_13915	COG0737	Belongs to the 5'-nucleotidase family
CAB88_13930	COG0201	protein transport
CAB88_13945	COG0697	spore germination
CAB88_13950	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_13960	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CAB88_13990	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_14005	COG2959	enzyme of heme biosynthesis
CAB88_14010	COG3773	Cell wall hydrolase
CAB88_14010	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_14045	COG1309	transcriptional regulator
CAB88_14080	COG3284	Transcriptional regulator
CAB88_14100	COG1349	DNA-binding transcription factor activity
CAB88_14115	COG1959	2 iron, 2 sulfur cluster binding
CAB88_14130	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CAB88_14135	COG0508	dehydrogenase complex catalyzes the overall conversion of
CAB88_14140	COG0022	dehydrogenase e1 component
CAB88_14145	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CAB88_14155	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_14160	COG0456	acetyltransferase
CAB88_14160	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CAB88_14200	COG4176	ABC-type proline glycine betaine transport system permease component
CAB88_14205	COG0517	IMP dehydrogenase activity
CAB88_14205	COG4175	Glycine betaine
CAB88_14215	COG0740	serine-type endopeptidase activity
CAB88_14235	COG2153	protein acetylation
CAB88_14240	COG3397	chitin binding
CAB88_14245	COG1819	glycosyl
CAB88_14260	COG2205	protein histidine kinase activity
CAB88_14270	COG2315	Protein conserved in bacteria
CAB88_14320	COG0456	acetyltransferase
CAB88_14325	COG3973	AAA domain
CAB88_14350	COG0514	ATP-dependent DNA helicase (RecQ)
CAB88_14385	COG4637	Psort location Cytoplasmic, score
CAB88_14405	COG3397	chitin binding
CAB88_14420	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CAB88_14425	COG1115	amino acid carrier protein
CAB88_14430	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_14435	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CAB88_14445	COG3938	Belongs to the proline racemase family
CAB88_14450	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CAB88_14495	COG1078	dGTPase activity
CAB88_14500	COG0586	Pfam SNARE associated Golgi protein
CAB88_14510	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CAB88_14520	COG4166	transmembrane transport
CAB88_14530	COG4948	Mandelate Racemase Muconate Lactonizing
CAB88_14545	COG0667	Aldo Keto reductase
CAB88_14585	COG3850	Histidine kinase
CAB88_14585	COG5002	protein histidine kinase activity
CAB88_14590	COG0745	RESPONSE REGULATOR receiver
CAB88_14625	COG1164	Oligoendopeptidase f
CAB88_14630	COG1307	EDD domain protein, DegV family
CAB88_14655	COG2814	Major facilitator Superfamily
CAB88_14665	COG1664	Polymer-forming cytoskeletal
CAB88_14670	COG0789	Transcriptional regulator
CAB88_14675	COG4533	DNA binding
CAB88_14680	COG0477	Major facilitator Superfamily
CAB88_14680	COG2814	Major facilitator Superfamily
CAB88_14705	COG2261	transglycosylase associated protein
CAB88_14720	COG2226	methyltransferase
CAB88_14760	COG0436	Aminotransferase
CAB88_14765	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CAB88_14775	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CAB88_14790	COG1131	(ABC) transporter
CAB88_14850	COG0628	permease
CAB88_14865	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB88_14870	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB88_14875	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CAB88_14915	COG2746	aminoglycoside 3-N-acetyltransferase activity
CAB88_14925	COG0697	spore germination
CAB88_14935	COG2318	DinB family
CAB88_14955	COG4912	Dna alkylation repair
CAB88_14960	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CAB88_14965	COG0346	lactoylglutathione lyase activity
CAB88_14970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_14980	COG0726	polysaccharide deacetylase
CAB88_14990	COG0861	Integral membrane protein TerC family
CAB88_14995	COG1368	sulfuric ester hydrolase activity
CAB88_15000	COG0488	(ABC) transporter
CAB88_15005	COG1033	growth of symbiont in host cell
CAB88_15005	COG2409	Drug exporters of the RND superfamily
CAB88_15010	COG1309	transcriptional regulator
CAB88_15025	COG0287	Prephenate dehydrogenase
CAB88_15045	COG1605	Chorismate mutase
CAB88_15045	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CAB88_15095	COG1388	LysM domain
CAB88_15095	COG3584	3D domain protein
CAB88_15110	COG0277	FAD linked oxidase domain protein
CAB88_15135	COG1879	ABC-type sugar transport system periplasmic component
CAB88_15140	COG1172	Belongs to the binding-protein-dependent transport system permease family
CAB88_15145	COG1172	Belongs to the binding-protein-dependent transport system permease family
CAB88_15155	COG2390	Transcriptional regulator
CAB88_15160	COG1070	Carbohydrate kinase
CAB88_15180	COG2329	Antibiotic biosynthesis monooxygenase
CAB88_15190	COG0640	Transcriptional regulator
CAB88_15195	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_15215	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CAB88_15220	COG4187	Peptidase family M20/M25/M40
CAB88_15225	COG1414	Transcriptional regulator
CAB88_15235	COG0833	amino acid
CAB88_15255	COG0825	malonyl-CoA metabolic process
CAB88_15265	COG3239	Fatty acid desaturase
CAB88_15275	COG2720	vancomycin resistance protein
CAB88_15280	COG1785	Belongs to the alkaline phosphatase family
CAB88_15290	COG3655	Transcriptional regulator
CAB88_15310	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_15315	COG0346	lactoylglutathione lyase activity
CAB88_15340	COG0714	Associated with various cellular activities
CAB88_15360	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CAB88_15365	COG0753	catalase activity
CAB88_15400	COG0778	Nitroreductase
CAB88_15405	COG1846	Transcriptional regulator
CAB88_15430	COG4884	unkown
CAB88_15430	COG3831	ATPase activity
CAB88_15465	COG0456	acetyltransferase
CAB88_15480	COG0697	spore germination
CAB88_15485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_15530	COG0730	response to heat
CAB88_15540	COG0833	amino acid
CAB88_15550	COG4335	DNA alkylation repair
CAB88_15560	COG5002	protein histidine kinase activity
CAB88_15565	COG0745	RESPONSE REGULATOR receiver
CAB88_15575	COG0577	efflux transmembrane transporter activity
CAB88_15575	COG1136	(ABC) transporter
CAB88_15640	COG1984	allophanate hydrolase subunit 2
CAB88_15645	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CAB88_15650	COG1414	Transcriptional regulator
CAB88_15665	COG3142	Participates in the control of copper homeostasis
CAB88_15670	COG0640	Transcriptional regulator
CAB88_15680	COG1960	acyl-CoA dehydrogenase activity
CAB88_15715	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CAB88_15750	COG0737	Belongs to the 5'-nucleotidase family
CAB88_15755	COG2267	carboxylic ester hydrolase activity
CAB88_15760	COG1335	isochorismatase
CAB88_15780	COG0583	DNA-binding transcription factor activity
CAB88_15785	COG1846	Transcriptional regulator
CAB88_15790	COG0598	Magnesium transport protein CorA
CAB88_15835	COG0814	amino acid
CAB88_15860	COG0415	Belongs to the DNA photolyase family
CAB88_15865	COG0288	reversible hydration of carbon dioxide
CAB88_15875	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CAB88_15880	COG5609	conserved protein (DUF2294)
CAB88_15885	COG0726	polysaccharide deacetylase
CAB88_15895	COG1575	Belongs to the MenA family. Type 1 subfamily
CAB88_15905	COG0798	PFAM Bile acid sodium symporter
CAB88_15910	COG0346	lactoylglutathione lyase activity
CAB88_15915	COG0640	Transcriptional regulator
CAB88_15930	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CAB88_15990	COG2814	Major facilitator Superfamily
CAB88_15995	COG1309	transcriptional regulator
CAB88_16000	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_16005	COG1522	sequence-specific DNA binding
CAB88_16020	COG0346	lactoylglutathione lyase activity
CAB88_16090	COG0745	RESPONSE REGULATOR receiver
CAB88_16095	COG5002	protein histidine kinase activity
CAB88_16095	COG3850	Histidine kinase
CAB88_16175	COG2814	Major facilitator Superfamily
CAB88_16200	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CAB88_16230	COG1690	Belongs to the RtcB family
CAB88_16240	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CAB88_16255	COG0277	FAD linked oxidase domain protein
CAB88_16265	COG0577	efflux transmembrane transporter activity
CAB88_16285	COG5002	protein histidine kinase activity
CAB88_16285	COG3850	Histidine kinase
CAB88_16295	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_16310	COG1619	proteins homologs of microcin C7 resistance protein MccF
CAB88_16330	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CAB88_16350	COG0662	Cupin 2, conserved barrel domain protein
CAB88_16360	COG2207	Transcriptional regulator
CAB88_16360	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_16380	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_16380	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_16400	COG1876	peptidase activity
CAB88_16405	COG2843	Capsule synthesis protein
CAB88_16415	COG0477	Major facilitator Superfamily
CAB88_16430	COG1846	Transcriptional regulator
CAB88_16435	COG2814	Major facilitator Superfamily
CAB88_16460	COG2031	fatty acid transporter
CAB88_16470	COG2249	NAD(P)H dehydrogenase (quinone) activity
CAB88_16525	COG1288	antiporter activity
CAB88_16530	COG2356	endonuclease I
CAB88_16540	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CAB88_16550	COG3620	sequence-specific DNA binding
CAB88_16565	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CAB88_16585	COG1733	regulation of RNA biosynthetic process
CAB88_16590	COG0778	Nitroreductase
CAB88_16625	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_16635	COG1131	(ABC) transporter
CAB88_16670	COG1011	Hydrolase
CAB88_16705	COG0346	lactoylglutathione lyase activity
CAB88_16710	COG1940	carbohydrate kinase activity
CAB88_16720	COG0110	maltose O-acetyltransferase activity
CAB88_16725	COG0180	Tryptophanyl-tRNA synthetase
CAB88_16735	COG0628	permease
CAB88_16760	COG0500	methyltransferase
CAB88_16770	COG0477	Major facilitator Superfamily
CAB88_16795	COG1253	flavin adenine dinucleotide binding
CAB88_16800	COG0789	Transcriptional regulator
CAB88_16810	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CAB88_16835	COG0697	spore germination
CAB88_16845	COG1357	PFAM Pentapeptide repeats (8 copies)
CAB88_16850	COG3813	Protein conserved in bacteria
CAB88_16855	COG2706	6-phosphogluconolactonase activity
CAB88_16860	COG1070	Carbohydrate kinase
CAB88_16875	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CAB88_16880	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CAB88_16885	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CAB88_16890	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CAB88_16895	COG0604	alcohol dehydrogenase
CAB88_16900	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB88_16915	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_16930	COG0840	transmembrane signaling receptor activity
CAB88_16945	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CAB88_16945	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CAB88_16950	COG1733	regulation of RNA biosynthetic process
CAB88_16965	COG0656	L-ascorbic acid biosynthetic process
CAB88_16970	COG2814	Major facilitator Superfamily
CAB88_17000	COG2824	Alkylphosphonate utilization operon protein PhnA
CAB88_17005	COG0659	secondary active sulfate transmembrane transporter activity
CAB88_17020	COG0814	amino acid
CAB88_17060	COG1733	regulation of RNA biosynthetic process
CAB88_17065	COG2188	Transcriptional regulator
CAB88_17075	COG0673	inositol 2-dehydrogenase activity
CAB88_17080	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CAB88_17085	COG1733	regulation of RNA biosynthetic process
CAB88_17090	COG1733	regulation of RNA biosynthetic process
CAB88_17115	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_17140	COG0384	phenazine biosynthesis protein PhzF
CAB88_17150	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_17160	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_17165	COG2249	NAD(P)H dehydrogenase (quinone) activity
CAB88_17170	COG1733	regulation of RNA biosynthetic process
CAB88_17185	COG0726	polysaccharide deacetylase
CAB88_17195	COG1191	sigma factor activity
CAB88_17205	COG1280	lysine exporter protein (LysE YggA)
CAB88_17260	COG1151	hydroxylamine reductase activity
CAB88_17275	COG3757	hydrolase, family 25
CAB88_17275	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_17310	COG2072	flavoprotein involved in K transport
CAB88_17350	COG1113	amino acid transport
CAB88_17355	COG2814	Major facilitator Superfamily
CAB88_17390	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CAB88_17395	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CAB88_17410	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_17415	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_17420	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_17425	COG3739	integral membrane protein
CAB88_17460	COG0583	DNA-binding transcription factor activity
CAB88_17495	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CAB88_17520	COG3781	membrane
CAB88_17535	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_17560	COG0584	glycerophosphoryl diester phosphodiesterase
CAB88_17570	COG0640	Transcriptional regulator
CAB88_17575	COG0604	alcohol dehydrogenase
CAB88_17585	COG0457	Tetratricopeptide repeat
CAB88_17595	COG2808	Putative FMN-binding domain
CAB88_17615	COG0277	FAD linked oxidase domain protein
CAB88_17645	COG0823	Involved in the tonB-independent uptake of proteins
CAB88_17650	COG3397	chitin binding
CAB88_17665	COG0697	spore germination
CAB88_17715	COG1309	transcriptional regulator
CAB88_17730	COG1876	peptidase activity
CAB88_17755	COG3852	Histidine kinase
CAB88_17765	COG1285	pathogenesis
CAB88_17780	COG2514	catechol 2,3-dioxygenase activity
CAB88_17785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_17790	COG1126	abc transporter atp-binding protein
CAB88_17795	COG0765	amino acid transport
CAB88_17800	COG2720	vancomycin resistance protein
CAB88_17830	COG1278	Cold shock
CAB88_17840	COG0716	FMN binding
CAB88_17850	COG1051	belongs to the nudix hydrolase family
CAB88_17870	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_17880	COG0165	Argininosuccinate lyase
CAB88_17895	COG4145	pantothenate transmembrane transporter activity
CAB88_17905	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_17910	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_17920	COG1657	PFAM Prenyltransferase squalene oxidase
CAB88_17925	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CAB88_17930	COG2962	Rard protein
CAB88_17935	COG3326	Membrane
CAB88_17950	COG0489	protein tyrosine kinase activity
CAB88_17960	COG0314	molybdopterin synthase activity
CAB88_17965	COG0303	'Molybdopterin
CAB88_17970	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CAB88_17975	COG2116	formate transmembrane transporter activity
CAB88_17990	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CAB88_17995	COG5609	conserved protein (DUF2294)
CAB88_18000	COG2427	Protein of unknown function (DUF1641)
CAB88_18005	COG3383	formate dehydrogenase (NAD+) activity
CAB88_18015	COG0697	spore germination
CAB88_18030	COG0531	amino acid
CAB88_18065	COG2226	methyltransferase
CAB88_18070	COG4166	transmembrane transport
CAB88_18080	COG4166	transmembrane transport
CAB88_18085	COG4166	transmembrane transport
CAB88_18090	COG1316	TRANSCRIPTIONal
CAB88_18100	COG1595	DNA-templated transcription, initiation
CAB88_18110	COG1131	(ABC) transporter
CAB88_18130	COG0673	inositol 2-dehydrogenase activity
CAB88_18135	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CAB88_18140	COG0187	DNA topoisomerase II activity
CAB88_18150	COG1832	CoA-binding protein
CAB88_18155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CAB88_18160	COG0745	RESPONSE REGULATOR receiver
CAB88_18170	COG1328	CTP reductase activity
CAB88_18170	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CAB88_18180	COG4841	protein insertion into membrane
CAB88_18185	COG0824	Thioesterase
CAB88_18215	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_18225	COG2274	protein secretion by the type I secretion system
CAB88_18230	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CAB88_18240	COG0726	polysaccharide deacetylase
CAB88_18260	COG2211	Major facilitator Superfamily
CAB88_18270	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CAB88_18285	COG0183	Belongs to the thiolase family
CAB88_18290	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_18295	COG1268	BioY protein
CAB88_18300	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_18305	COG1396	sequence-specific DNA binding
CAB88_18340	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_18355	COG5002	protein histidine kinase activity
CAB88_18360	COG0400	carboxylic ester hydrolase activity
CAB88_18365	COG0346	lactoylglutathione lyase activity
CAB88_18370	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CAB88_18375	COG0069	glutamate synthase activity
CAB88_18380	COG1902	pentaerythritol trinitrate reductase activity
CAB88_18385	COG1329	Transcriptional regulator
CAB88_18390	COG0010	Belongs to the arginase family
CAB88_18415	COG2226	methyltransferase
CAB88_18445	COG4846	Membrane protein involved in cytochrome C biogenesis
CAB88_18450	COG0785	Cytochrome C biogenesis protein
CAB88_18475	COG1131	(ABC) transporter
CAB88_18490	COG0583	DNA-binding transcription factor activity
CAB88_18500	COG1346	cytolysis
CAB88_18515	COG0730	response to heat
CAB88_18540	COG1132	(ABC) transporter
CAB88_18545	COG1132	(ABC) transporter
CAB88_18580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_18585	COG0737	Belongs to the 5'-nucleotidase family
CAB88_18605	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CAB88_18625	COG1695	Transcriptional regulator
CAB88_18630	COG0174	glutamine synthetase
CAB88_18635	COG0789	Transcriptional regulator
CAB88_18640	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CAB88_18645	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CAB88_18650	COG2860	membrane
CAB88_18655	COG0464	growth
CAB88_18690	COG1388	LysM domain
CAB88_18690	COG3584	3D domain protein
CAB88_18700	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB88_18700	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_18700	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB88_18705	COG1105	Belongs to the carbohydrate kinase PfkB family
CAB88_18710	COG1349	DNA-binding transcription factor activity
CAB88_18715	COG1979	alcohol dehydrogenase
CAB88_18720	COG2322	membrane
CAB88_18735	COG1113	amino acid transport
CAB88_18755	COG1408	metallophosphoesterase
CAB88_18760	COG2116	formate transmembrane transporter activity
CAB88_18775	COG2217	Heavy metal translocating P-type atpase
CAB88_18780	COG2608	mercury ion transmembrane transporter activity
CAB88_18785	COG1937	Protein conserved in bacteria
CAB88_18805	COG2819	hydrolase of the alpha beta superfamily
CAB88_18810	COG1120	ATPase activity
CAB88_18815	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_18820	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_18825	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_18830	COG0708	Exodeoxyribonuclease III
CAB88_18835	COG2169	Transcriptional regulator
CAB88_18840	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CAB88_18845	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CAB88_18855	COG2364	Membrane
CAB88_18870	COG2267	carboxylic ester hydrolase activity
CAB88_18875	COG5001	Diguanylate cyclase
CAB88_18875	COG3300	MHYT domain
CAB88_18895	COG1086	Polysaccharide biosynthesis protein
CAB88_18915	COG1346	cytolysis
CAB88_18925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_18935	COG2188	Transcriptional regulator
CAB88_18940	COG2723	6-phospho-beta-galactosidase activity
CAB88_18950	COG1404	Belongs to the peptidase S8 family
CAB88_18955	COG3773	Cell wall hydrolase
CAB88_18970	COG1368	sulfuric ester hydrolase activity
CAB88_18975	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CAB88_19000	COG4550	Control of competence regulator ComK, YlbF/YmcA
CAB88_19010	COG1013	pyruvate-flavodoxin oxidoreductase activity
CAB88_19015	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CAB88_19015	COG0674	pyruvate-flavodoxin oxidoreductase activity
CAB88_19025	COG2359	stage V sporulation protein S
CAB88_19030	COG1692	metallophosphoesterase
CAB88_19055	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CAB88_19060	COG1426	Protein conserved in bacteria
CAB88_19075	COG0300	oxidoreductase activity
CAB88_19080	COG0612	Peptidase, M16
CAB88_19085	COG0612	Peptidase, M16
CAB88_19110	COG2188	Transcriptional regulator
CAB88_19130	COG0740	serine-type endopeptidase activity
CAB88_19135	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CAB88_19145	COG0527	aspartate kinase activity
CAB88_19150	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CAB88_19155	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CAB88_19170	COG5444	nuclease activity
CAB88_19200	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_19320	COG0582	viral genome integration into host DNA
CAB88_19365	COG0305	Participates in initiation and elongation during chromosome replication
CAB88_19400	COG1396	sequence-specific DNA binding
CAB88_19425	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CAB88_19430	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CAB88_19435	COG1873	PFAM PRC-barrel domain
CAB88_19440	COG0612	Peptidase, M16
CAB88_19445	COG0726	polysaccharide deacetylase
CAB88_19460	COG0196	riboflavin kinase activity
CAB88_19475	COG1550	Protein conserved in bacteria
CAB88_19485	COG1358	cellular component organization or biogenesis
CAB88_19490	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CAB88_19495	COG0195	Participates in both transcription termination and antitermination
CAB88_19515	COG0750	zinc metalloprotease
CAB88_19525	COG4589	Belongs to the CDS family
CAB88_19570	COG4974	Belongs to the 'phage' integrase family
CAB88_19580	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CAB88_19585	COG0758	DNA mediated transformation
CAB88_19590	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CAB88_19630	COG1837	Belongs to the UPF0109 family
CAB88_19640	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CAB88_19650	COG0552	protein localization to endoplasmic reticulum
CAB88_19655	COG1196	nuclear chromosome segregation
CAB88_19670	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_19675	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CAB88_19690	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CAB88_19695	COG1461	Dihydroxyacetone kinase
CAB88_19700	COG1302	Protein conserved in bacteria
CAB88_19715	COG1564	THIamine pyrophosphokinase
CAB88_19720	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CAB88_19730	COG0515	serine threonine protein kinase
CAB88_19730	COG2815	serine threonine protein kinase
CAB88_19735	COG0631	protein serine/threonine phosphatase activity
CAB88_19745	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CAB88_19745	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CAB88_19760	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CAB88_19765	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CAB88_19785	COG1561	YicC-like family, N-terminal region
CAB88_19790	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CAB88_19805	COG0006	proline dipeptidase activity
CAB88_19825	COG3069	C4-dicarboxylate transmembrane transporter activity
CAB88_19890	COG0564	pseudouridine synthase activity
CAB88_19910	COG3599	regulation of cell shape
CAB88_19915	COG2302	S4 RNA-binding domain
CAB88_19920	COG0762	integral membrane protein
CAB88_19930	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CAB88_19940	COG1873	PFAM PRC-barrel domain
CAB88_19945	COG1191	sigma factor activity
CAB88_19950	COG1191	sigma factor activity
CAB88_19960	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CAB88_19965	COG0849	cell division
CAB88_19980	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CAB88_19985	COG0772	Belongs to the SEDS family
CAB88_20005	COG0768	penicillin binding
CAB88_20030	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CAB88_20050	COG1399	metal-binding, possibly nucleic acid-binding protein
CAB88_20060	COG3480	Lon protease (S16) C-terminal proteolytic domain
CAB88_20065	COG1752	Esterase of the alpha-beta hydrolase superfamily
CAB88_20070	COG3314	Sporulation integral membrane protein YlbJ
CAB88_20080	COG0742	ribosomal rna small subunit methyltransferase
CAB88_20095	COG3679	Belongs to the UPF0342 family
CAB88_20100	COG0406	alpha-ribazole phosphatase activity
CAB88_20115	COG2340	Cysteine-rich secretory protein family
CAB88_20135	COG3344	reverse transcriptase
CAB88_20145	COG3336	cytochrome c oxidase
CAB88_20180	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CAB88_20190	COG0772	Belongs to the SEDS family
CAB88_20200	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CAB88_20205	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CAB88_20215	COG4896	Protein conserved in bacteria
CAB88_20240	COG0483	inositol monophosphate 1-phosphatase activity
CAB88_20260	COG1982	Orn Lys Arg decarboxylase major
CAB88_20310	COG0022	dehydrogenase e1 component
CAB88_20315	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CAB88_20330	COG0561	phosphatase activity
CAB88_20345	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CAB88_20350	COG0569	domain protein
CAB88_20370	COG0583	DNA-binding transcription factor activity
CAB88_20375	COG0517	IMP dehydrogenase activity
CAB88_20385	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CAB88_20395	COG4703	Protein of unknown function (DUF1797)
CAB88_20410	COG2200	EAL domain
CAB88_20415	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_20420	COG1408	metallophosphoesterase
CAB88_20465	COG2814	Major facilitator Superfamily
CAB88_20485	COG3209	COG3209 Rhs family protein
CAB88_20500	COG2205	protein histidine kinase activity
CAB88_20510	COG0436	Aminotransferase
CAB88_20520	COG3833	ABC-type maltose transport systems, permease component
CAB88_20525	COG1175	transmembrane transport
CAB88_20530	COG2182	Extracellular solute-binding protein
CAB88_20540	COG0366	Alpha amylase catalytic
CAB88_20545	COG3842	ATPase activity
CAB88_20585	COG0183	Belongs to the thiolase family
CAB88_20620	COG1695	Transcriptional regulator
CAB88_20625	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_20645	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CAB88_20650	COG0436	Aminotransferase
CAB88_20685	COG2084	Dehydrogenase
CAB88_20695	COG2199	diguanylate cyclase activity
CAB88_20695	COG2203	Gaf domain
CAB88_20700	COG0778	Nitroreductase
CAB88_20725	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CAB88_20725	COG2190	(PTS) system
CAB88_20725	COG1263	PTS System
CAB88_20730	COG3711	transcriptional antiterminator
CAB88_20750	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CAB88_20780	COG1547	Domain of unknown function (DUF309)
CAB88_20785	COG0456	acetyltransferase
CAB88_20790	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CAB88_20795	COG4086	secreted protein
CAB88_20800	COG0561	phosphatase activity
CAB88_20805	COG0697	spore germination
CAB88_20820	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB88_20845	COG0733	neurotransmitter:sodium symporter activity
CAB88_20865	COG1686	Belongs to the peptidase S11 family
CAB88_20875	COG1725	Transcriptional regulator
CAB88_20880	COG1131	(ABC) transporter
CAB88_20900	COG1846	Transcriptional regulator
CAB88_20915	COG0598	Magnesium transport protein CorA
CAB88_20940	COG4974	Belongs to the 'phage' integrase family
CAB88_20950	COG0735	belongs to the Fur family
CAB88_20955	COG1300	Membrane
CAB88_20975	COG0667	Aldo Keto reductase
CAB88_20980	COG0656	L-ascorbic acid biosynthetic process
CAB88_20985	COG0456	acetyltransferase
CAB88_20985	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CAB88_20995	COG0737	Belongs to the 5'-nucleotidase family
CAB88_20995	COG4085	toxin activity
CAB88_20995	COG1525	nuclease
CAB88_21005	COG0596	Alpha beta hydrolase
CAB88_21010	COG2056	Na+-H+ antiporter family
CAB88_21015	COG1609	Transcriptional regulator
CAB88_21020	COG0456	acetyltransferase
CAB88_21025	COG1073	alpha beta
CAB88_21040	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CAB88_21040	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CAB88_21045	COG0307	riboflavin synthase, alpha
CAB88_21075	COG1073	alpha beta
CAB88_21075	COG2226	methyltransferase
CAB88_21090	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CAB88_21110	COG0737	Belongs to the 5'-nucleotidase family
CAB88_21120	COG1522	sequence-specific DNA binding
CAB88_21160	COG5444	nuclease activity
CAB88_21195	COG0300	oxidoreductase activity
CAB88_21200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_21205	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CAB88_21210	COG1760	l-serine dehydratase
CAB88_21215	COG1760	l-serine dehydratase
CAB88_21245	COG1285	pathogenesis
CAB88_21260	COG2195	Cleaves the N-terminal amino acid of tripeptides
CAB88_21265	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_21280	COG1376	ErfK ybiS ycfS ynhG family protein
CAB88_21285	COG4129	membrane
CAB88_21290	COG1126	abc transporter atp-binding protein
CAB88_21295	COG0765	amino acid transport
CAB88_21300	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CAB88_21320	COG2323	membrane
CAB88_21325	COG0772	Belongs to the SEDS family
CAB88_21335	COG0508	dehydrogenase complex catalyzes the overall conversion of
CAB88_21340	COG0022	dehydrogenase e1 component
CAB88_21345	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CAB88_21350	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CAB88_21360	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CAB88_21365	COG0280	phosphate acetyltransferase
CAB88_21375	COG3290	protein histidine kinase activity
CAB88_21375	COG3829	transcription factor binding
CAB88_21385	COG0584	glycerophosphoryl diester phosphodiesterase
CAB88_21390	COG3093	addiction module antidote protein HigA
CAB88_21410	COG0750	zinc metalloprotease
CAB88_21415	COG0497	DNA recombination
CAB88_21425	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CAB88_21435	COG0142	geranyltranstransferase activity
CAB88_21460	COG1302	Protein conserved in bacteria
CAB88_21465	COG0439	Biotin carboxylase
CAB88_21470	COG0511	ligase activity, forming carbon-carbon bonds
CAB88_21515	COG3854	ATPases associated with a variety of cellular activities
CAB88_21540	COG0006	proline dipeptidase activity
CAB88_21555	COG3872	metal-dependent enzyme
CAB88_21565	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CAB88_21600	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_21610	COG1609	Transcriptional regulator
CAB88_21620	COG2076	Multidrug Resistance protein
CAB88_21625	COG2076	Multidrug Resistance protein
CAB88_21665	COG1725	Transcriptional regulator
CAB88_21700	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CAB88_21770	COG1459	type II secretion system
CAB88_21775	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CAB88_21840	COG1410	methionine synthase
CAB88_21840	COG0646	methionine synthase
CAB88_21845	COG0646	methionine synthase
CAB88_21845	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CAB88_21850	COG0626	cystathionine gamma-synthase activity
CAB88_21855	COG0626	cystathionine gamma-synthase activity
CAB88_21875	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_21885	COG1940	carbohydrate kinase activity
CAB88_21890	COG4483	Protein conserved in bacteria
CAB88_21895	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CAB88_21905	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CAB88_21910	COG0704	Plays a role in the regulation of phosphate uptake
CAB88_21920	COG0573	inorganic phosphate transmembrane transporter activity
CAB88_21925	COG0573	inorganic phosphate transmembrane transporter activity
CAB88_21930	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CAB88_21940	COG0477	Major facilitator Superfamily
CAB88_21945	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CAB88_21955	COG5521	maltodextrose utilization protein MalA
CAB88_21970	COG0735	belongs to the Fur family
CAB88_21975	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CAB88_21980	COG1121	(ABC) transporter
CAB88_21985	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_22015	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CAB88_22020	COG2384	SAM-dependent methyltransferase
CAB88_22030	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CAB88_22035	COG0358	DNA primase activity
CAB88_22055	COG0517	IMP dehydrogenase activity
CAB88_22070	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CAB88_22075	COG0295	cytidine deaminase activity
CAB88_22080	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CAB88_22090	COG1480	7TM receptor with intracellular HD hydrolase
CAB88_22095	COG1702	phosphate starvation-inducible protein PhoH
CAB88_22115	COG1610	YqeY-like protein
CAB88_22130	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CAB88_22135	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CAB88_22165	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CAB88_22170	COG1733	regulation of RNA biosynthetic process
CAB88_22195	COG1466	dna polymerase III delta subunit
CAB88_22205	COG0658	competence protein
CAB88_22205	COG2333	competence protein COMEC
CAB88_22210	COG2131	deaminase
CAB88_22215	COG1596	polysaccharide export
CAB88_22215	COG1555	photosystem II stabilization
CAB88_22220	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CAB88_22225	COG2226	methyltransferase
CAB88_22230	COG0799	negative regulation of ribosome biogenesis
CAB88_22235	COG1713	HD superfamily hydrolase involved in NAD metabolism
CAB88_22245	COG1534	Rna-binding protein
CAB88_22255	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CAB88_22260	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CAB88_22275	COG1191	sigma factor activity
CAB88_22285	COG1595	DNA-templated transcription, initiation
CAB88_22295	COG0778	Nitroreductase
CAB88_22300	COG2357	RelA SpoT domain protein
CAB88_22310	COG1785	Belongs to the alkaline phosphatase family
CAB88_22320	COG2267	carboxylic ester hydrolase activity
CAB88_22355	COG1404	Belongs to the peptidase S8 family
CAB88_22360	COG3186	Phenylalanine-4-hydroxylase
CAB88_22370	COG2514	catechol 2,3-dioxygenase activity
CAB88_22375	COG2259	Doxx family
CAB88_22420	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_22435	COG1012	belongs to the aldehyde dehydrogenase family
CAB88_22435	COG1454	alcohol dehydrogenase
CAB88_22440	COG0626	cystathionine gamma-synthase activity
CAB88_22445	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CAB88_22470	COG0768	penicillin binding
CAB88_22500	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CAB88_22530	COG0628	permease
CAB88_22550	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CAB88_22565	COG1104	cysteine desulfurase activity
CAB88_22570	COG1959	2 iron, 2 sulfur cluster binding
CAB88_22575	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CAB88_22595	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CAB88_22620	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CAB88_22630	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CAB88_22630	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CAB88_22635	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CAB88_22640	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CAB88_22640	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CAB88_22650	COG2244	polysaccharide biosynthetic process
CAB88_22655	COG2323	membrane
CAB88_22665	COG1862	Preprotein translocase
CAB88_22695	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CAB88_22725	COG0157	Belongs to the NadC ModD family
CAB88_22730	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CAB88_22735	COG1104	cysteine desulfurase activity
CAB88_22740	COG1827	regulation of RNA biosynthetic process
CAB88_22745	COG2258	MOSC domain
CAB88_22750	COG0077	Prephenate dehydratase
CAB88_22755	COG0577	efflux transmembrane transporter activity
CAB88_22760	COG0577	efflux transmembrane transporter activity
CAB88_22765	COG1136	(ABC) transporter
CAB88_22770	COG5002	protein histidine kinase activity
CAB88_22775	COG0745	RESPONSE REGULATOR receiver
CAB88_22785	COG3290	protein histidine kinase activity
CAB88_22795	COG2868	ribosomal protein
CAB88_22805	COG1530	ribonuclease E activity
CAB88_22810	COG1994	Peptidase M50
CAB88_22815	COG0739	heme binding
CAB88_22820	COG2894	cell division
CAB88_22835	COG1792	Involved in formation and maintenance of cell shape
CAB88_22840	COG1077	Cell shape determining protein MreB Mrl
CAB88_22865	COG0285	dihydrofolate synthase activity
CAB88_22880	COG1388	LysM domain
CAB88_22890	COG0113	porphobilinogen synthase activity
CAB88_22895	COG1587	Uroporphyrinogen-III synthase
CAB88_22905	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CAB88_22915	COG1846	Transcriptional regulator
CAB88_22920	COG1764	response to oxidative stress
CAB88_22935	COG1067	ATP-dependent peptidase activity
CAB88_22935	COG0470	DNA polymerase III
CAB88_23035	COG3611	Membrane attachment protein
CAB88_23080	COG0622	Phosphoesterase
CAB88_23095	COG5401	PFAM Sporulation and spore germination
CAB88_23115	COG1309	transcriptional regulator
CAB88_23125	COG2197	response regulator
CAB88_23130	COG2233	PERMEase
CAB88_23135	COG0402	S-adenosylhomocysteine deaminase activity
CAB88_23140	COG1983	PspC domain protein
CAB88_23145	COG1396	sequence-specific DNA binding
CAB88_23150	COG0697	spore germination
CAB88_23160	COG1959	2 iron, 2 sulfur cluster binding
CAB88_23165	COG1668	transmembrane transport
CAB88_23170	COG4152	abc transporter atp-binding protein
CAB88_23175	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CAB88_23180	COG1360	Flagellar Motor Protein
CAB88_23185	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CAB88_23195	COG1876	peptidase activity
CAB88_23200	COG0824	Thioesterase
CAB88_23205	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CAB88_23210	COG1053	succinate dehydrogenase
CAB88_23215	COG2009	succinate dehydrogenase
CAB88_23220	COG1719	4-vinyl reductase, 4VR
CAB88_23230	COG3118	belongs to the thioredoxin family
CAB88_23235	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CAB88_23240	COG2086	electron transfer activity
CAB88_23245	COG1024	Enoyl-CoA hydratase
CAB88_23250	COG1309	transcriptional regulator
CAB88_23255	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_23285	COG2318	DinB family
CAB88_23315	COG1131	(ABC) transporter
CAB88_23320	COG2205	protein histidine kinase activity
CAB88_23325	COG0745	RESPONSE REGULATOR receiver
CAB88_23335	COG4895	conserved protein (DUF2196)
CAB88_23340	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CAB88_23350	COG4509	Sortase family
CAB88_23355	COG1120	ATPase activity
CAB88_23370	COG5386	Cell surface protein
CAB88_23380	COG5386	Cell surface protein
CAB88_23385	COG1114	Component of the transport system for branched-chain amino acids
CAB88_23390	COG1187	pseudouridine synthase activity
CAB88_23405	COG1796	DNA polymerase
CAB88_23405	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CAB88_23410	COG1286	toxin biosynthetic process
CAB88_23455	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CAB88_23465	COG1418	mRNA catabolic process
CAB88_23485	COG2814	Major facilitator Superfamily
CAB88_23490	COG1566	PFAM secretion protein HlyD family protein
CAB88_23495	COG1309	transcriptional regulator
CAB88_23500	COG1363	Peptidase, m42
CAB88_23525	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CAB88_23540	COG1484	DNA-dependent DNA replication
CAB88_23545	COG3611	Membrane attachment protein
CAB88_23555	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CAB88_23565	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CAB88_23570	COG0237	dephospho-CoA kinase activity
CAB88_23575	COG1971	Probably functions as a manganese efflux pump
CAB88_23585	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_23585	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CAB88_23590	COG5002	protein histidine kinase activity
CAB88_23595	COG0745	RESPONSE REGULATOR receiver
CAB88_23620	COG0538	isocitrate dehydrogenase activity
CAB88_23625	COG0372	Belongs to the citrate synthase family
CAB88_23640	COG0628	permease
CAB88_23645	COG3030	protein affecting phage T7 exclusion by the F plasmid
CAB88_23670	COG1725	Transcriptional regulator
CAB88_23675	COG0281	malic enzyme
CAB88_23680	COG0587	DNA-directed DNA polymerase activity
CAB88_23695	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CAB88_23710	COG4109	DRTGG domain
CAB88_23725	COG0006	proline dipeptidase activity
CAB88_23760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_23765	COG0662	Cupin 2, conserved barrel domain protein
CAB88_23780	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_23785	COG0589	response to stress
CAB88_23830	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_23855	COG0827	DNA restriction-modification system
CAB88_23860	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CAB88_23865	COG3874	Sporulation protein YtfJ
CAB88_23880	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CAB88_23890	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CAB88_23905	COG1104	cysteine desulfurase activity
CAB88_23915	COG0583	DNA-binding transcription factor activity
CAB88_23920	COG0697	spore germination
CAB88_23925	COG1309	transcriptional regulator
CAB88_23930	COG1956	GAF domain-containing protein
CAB88_23935	COG0626	cystathionine gamma-synthase activity
CAB88_23970	COG1595	DNA-templated transcription, initiation
CAB88_23980	COG0110	maltose O-acetyltransferase activity
CAB88_23985	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CAB88_23990	COG0454	-acetyltransferase
CAB88_23995	COG0517	IMP dehydrogenase activity
CAB88_24000	COG0123	including yeast histone deacetylase and acetoin utilization protein
CAB88_24005	COG2267	carboxylic ester hydrolase activity
CAB88_24015	COG0745	RESPONSE REGULATOR receiver
CAB88_24020	COG5002	protein histidine kinase activity
CAB88_24025	COG0666	response to abiotic stimulus
CAB88_24055	COG1609	Transcriptional regulator
CAB88_24070	COG4851	CamS sex pheromone cAM373 precursor
CAB88_24075	COG3118	belongs to the thioredoxin family
CAB88_24085	COG2309	aminopeptidase activity
CAB88_24105	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_24110	COG0697	spore germination
CAB88_24115	COG0789	Transcriptional regulator
CAB88_24130	COG1674	ftsk spoiiie
CAB88_24145	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CAB88_24155	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_24160	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CAB88_24165	COG1363	Peptidase, m42
CAB88_24175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_24190	COG0510	thiamine kinase activity
CAB88_24195	COG1523	belongs to the glycosyl hydrolase 13 family
CAB88_24205	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CAB88_24210	COG1349	DNA-binding transcription factor activity
CAB88_24215	COG1187	pseudouridine synthase activity
CAB88_24220	COG2244	polysaccharide biosynthetic process
CAB88_24225	COG2081	HI0933 family
CAB88_24235	COG2814	Major facilitator Superfamily
CAB88_24245	COG3832	glyoxalase III activity
CAB88_24270	COG1329	Transcriptional regulator
CAB88_24295	COG0314	molybdopterin synthase activity
CAB88_24300	COG1763	Mo-molybdopterin cofactor biosynthetic process
CAB88_24305	COG0303	'Molybdopterin
CAB88_24315	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CAB88_24320	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CAB88_24340	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_24350	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CAB88_24390	COG2814	Major facilitator Superfamily
CAB88_24395	COG0475	glutathione-regulated potassium exporter activity
CAB88_24400	COG0490	domain, Protein
CAB88_24405	COG0582	viral genome integration into host DNA
CAB88_24420	COG1136	(ABC) transporter
CAB88_24450	COG1242	4 iron, 4 sulfur cluster binding
CAB88_24455	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CAB88_24460	COG1131	(ABC) transporter
CAB88_24470	COG1794	racemase activity, acting on amino acids and derivatives
CAB88_24495	COG2267	carboxylic ester hydrolase activity
CAB88_24500	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CAB88_24505	COG0671	phosphoesterase, PA-phosphatase related
CAB88_24510	COG0438	transferase activity, transferring glycosyl groups
CAB88_24605	COG5002	protein histidine kinase activity
CAB88_24610	COG3852	Histidine kinase
CAB88_24620	COG2267	carboxylic ester hydrolase activity
CAB88_24625	COG1368	sulfuric ester hydrolase activity
CAB88_24650	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CAB88_24655	COG1116	anion transmembrane transporter activity
CAB88_24660	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CAB88_24685	COG0494	nUDIX hydrolase
CAB88_24720	COG2076	Multidrug Resistance protein
CAB88_24725	COG2076	Multidrug Resistance protein
CAB88_24730	COG0789	Transcriptional regulator
CAB88_24745	COG0288	reversible hydration of carbon dioxide
CAB88_24750	COG1271	oxidase subunit
CAB88_24755	COG1294	oxidase, subunit
CAB88_24770	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_24790	COG1842	Phage shock protein A
CAB88_24815	COG3859	Proton-coupled thiamine transporter YuaJ
CAB88_24820	COG5002	protein histidine kinase activity
CAB88_24825	COG0745	RESPONSE REGULATOR receiver
CAB88_24855	COG1597	lipid kinase activity
CAB88_24865	COG0577	efflux transmembrane transporter activity
CAB88_24870	COG1136	(ABC) transporter
CAB88_24885	COG0586	Pfam SNARE associated Golgi protein
CAB88_24895	COG0577	efflux transmembrane transporter activity
CAB88_24900	COG1136	(ABC) transporter
CAB88_24905	COG3708	Transcriptional regulator
CAB88_24905	COG2207	Transcriptional regulator
CAB88_24915	COG5658	integral membrane protein
CAB88_24920	COG0640	Transcriptional regulator
CAB88_24925	COG0745	RESPONSE REGULATOR receiver
CAB88_24930	COG2205	protein histidine kinase activity
CAB88_24935	COG0577	efflux transmembrane transporter activity
CAB88_24940	COG0577	efflux transmembrane transporter activity
CAB88_24945	COG1136	(ABC) transporter
CAB88_24950	COG0577	efflux transmembrane transporter activity
CAB88_24995	COG3964	amidohydrolase
CAB88_25020	COG4948	Mandelate Racemase Muconate Lactonizing
CAB88_25030	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CAB88_25035	COG0596	Alpha beta hydrolase
CAB88_25045	COG1169	isochorismate synthase
CAB88_25050	COG1575	Belongs to the MenA family. Type 1 subfamily
CAB88_25055	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CAB88_25060	COG1278	Cold shock
CAB88_25090	COG0058	SHG alpha-glucan phosphorylase activity
CAB88_25100	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CAB88_25120	COG1404	Belongs to the peptidase S8 family
CAB88_25270	COG1285	pathogenesis
CAB88_25275	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CAB88_25295	COG2155	Conserved Protein
CAB88_25300	COG1098	S1 RNA binding domain
CAB88_25305	COG0436	Aminotransferase
CAB88_25310	COG1522	sequence-specific DNA binding
CAB88_25315	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CAB88_25320	COG2267	carboxylic ester hydrolase activity
CAB88_25330	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CAB88_25350	COG5018	Exonuclease
CAB88_25355	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CAB88_25375	COG0423	glycine-tRNA ligase activity
CAB88_25380	COG2050	protein possibly involved in aromatic compounds catabolism
CAB88_25390	COG1268	BioY protein
CAB88_25395	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CAB88_25400	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CAB88_25420	COG2076	Multidrug Resistance protein
CAB88_25425	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CAB88_25435	COG3584	3D domain protein
CAB88_25450	COG1252	NADH dehydrogenase
CAB88_25465	COG3708	Transcriptional regulator
CAB88_25480	COG1683	Conserved Protein
CAB88_25535	COG4824	toxin secretion phage lysis holin
CAB88_25680	COG1191	sigma factor activity
CAB88_25705	COG3646	Phage regulatory protein
CAB88_25705	COG3645	SOS response
CAB88_25725	COG1396	sequence-specific DNA binding
CAB88_25780	COG0316	Belongs to the HesB IscA family
CAB88_25795	COG1252	NADH dehydrogenase
CAB88_25805	COG2274	protein secretion by the type I secretion system
CAB88_25810	COG0390	transport system, permease component
CAB88_25815	COG2824	Alkylphosphonate utilization operon protein PhnA
CAB88_25840	COG4837	Protein of unknown function (DUF1462)
CAB88_25845	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CAB88_25860	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CAB88_25865	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CAB88_25885	COG1358	cellular component organization or biogenesis
CAB88_25895	COG2249	NAD(P)H dehydrogenase (quinone) activity
CAB88_25900	COG0647	UMP catabolic process
CAB88_25910	COG2445	Protein of unknown function DUF86
CAB88_25915	COG1494	fructose-1,6-bisphosphatase
CAB88_25940	COG4470	Protein conserved in bacteria
CAB88_25950	COG0789	Transcriptional regulator
CAB88_25955	COG4377	Putative membrane peptidase family (DUF2324)
CAB88_25980	COG0739	heme binding
CAB88_25990	COG3377	Domain of unknown function (DUF1805)
CAB88_25995	COG0737	Belongs to the 5'-nucleotidase family
CAB88_26000	COG0719	Fe-S assembly protein
CAB88_26005	COG0822	iron-sulfur transferase activity
CAB88_26010	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CAB88_26015	COG0719	Fe-S assembly protein
CAB88_26020	COG0396	ATPase activity
CAB88_26025	COG1464	Belongs to the NlpA lipoprotein family
CAB88_26030	COG1464	Belongs to the NlpA lipoprotein family
CAB88_26035	COG2011	ABC-type metal ion transport system permease component
CAB88_26050	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CAB88_26055	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CAB88_26065	COG1393	Belongs to the ArsC family
CAB88_26105	COG0039	L-malate dehydrogenase activity
CAB88_26125	COG1309	transcriptional regulator
CAB88_26130	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CAB88_26135	COG1960	acyl-CoA dehydrogenase activity
CAB88_26140	COG0183	Belongs to the thiolase family
CAB88_26145	COG1250	3-hydroxyacyl-CoA dehydrogenase
CAB88_26145	COG1024	Enoyl-CoA hydratase
CAB88_26155	COG1686	Belongs to the peptidase S11 family
CAB88_26170	COG0011	TIGRFAM Protein of
CAB88_26175	COG0840	transmembrane signaling receptor activity
CAB88_26190	COG2814	Major facilitator Superfamily
CAB88_26195	COG0531	amino acid
CAB88_26220	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CAB88_26260	COG0586	Pfam SNARE associated Golgi protein
CAB88_26270	COG1376	ErfK ybiS ycfS ynhG family protein
CAB88_26275	COG0745	RESPONSE REGULATOR receiver
CAB88_26280	COG5002	protein histidine kinase activity
CAB88_26310	COG0840	transmembrane signaling receptor activity
CAB88_26315	COG2151	metal-sulfur cluster biosynthetic enzyme
CAB88_26320	COG3227	Zinc metalloprotease (Elastase)
CAB88_26340	COG0586	Pfam SNARE associated Golgi protein
CAB88_26345	COG0475	glutathione-regulated potassium exporter activity
CAB88_26350	COG0490	domain, Protein
CAB88_26360	COG1115	amino acid carrier protein
CAB88_26365	COG0783	Belongs to the Dps family
CAB88_26375	COG2318	DinB family
CAB88_26385	COG1611	Belongs to the LOG family
CAB88_26395	COG1528	Iron-storage protein
CAB88_26405	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_26410	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_26415	COG1115	amino acid carrier protein
CAB88_26420	COG1115	amino acid carrier protein
CAB88_26425	COG2910	NAD(P)H-binding
CAB88_26445	COG0656	L-ascorbic acid biosynthetic process
CAB88_26450	COG2814	Major facilitator Superfamily
CAB88_26455	COG1733	regulation of RNA biosynthetic process
CAB88_26465	COG1252	NADH dehydrogenase
CAB88_26470	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CAB88_26520	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CAB88_26525	COG3223	Belongs to the PsiE family
CAB88_26535	COG1335	isochorismatase
CAB88_26605	COG0557	exoribonuclease II activity
CAB88_26610	COG1647	Serine aminopeptidase, S33
CAB88_26615	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CAB88_26620	COG1346	cytolysis
CAB88_26655	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CAB88_26670	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CAB88_26680	COG4585	Histidine kinase
CAB88_26710	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CAB88_26725	COG2323	membrane
CAB88_26735	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_26745	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CAB88_26755	COG1051	belongs to the nudix hydrolase family
CAB88_26765	COG0492	ferredoxin-NADP+ reductase activity
CAB88_26770	COG0457	Tetratricopeptide repeat
CAB88_26775	COG0110	maltose O-acetyltransferase activity
CAB88_26795	COG1950	PFAM Membrane protein of
CAB88_26805	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CAB88_26825	COG0789	Transcriptional regulator
CAB88_26845	COG0583	DNA-binding transcription factor activity
CAB88_26855	COG0655	NAD(P)H dehydrogenase (quinone) activity
CAB88_26860	COG0488	(ABC) transporter
CAB88_26870	COG1132	(ABC) transporter
CAB88_26880	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CAB88_26885	COG0793	Belongs to the peptidase S41A family
CAB88_26885	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_26890	COG2177	Part of the ABC transporter FtsEX involved in
CAB88_26895	COG2884	Cell division ATP-binding protein ftsE
CAB88_26910	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CAB88_26925	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CAB88_26930	COG1278	Cold shock
CAB88_26935	COG1040	competence protein
CAB88_26940	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CAB88_26945	COG1388	LysM domain
CAB88_26945	COG0791	NLP P60 protein
CAB88_26950	COG1733	regulation of RNA biosynthetic process
CAB88_26960	COG1307	EDD domain protein, DegV family
CAB88_26965	COG1739	Uncharacterized protein family UPF0029
CAB88_26970	COG1316	TRANSCRIPTIONal
CAB88_26975	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CAB88_26980	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CAB88_26985	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CAB88_26995	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CAB88_26995	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CAB88_27015	COG1486	melibiose metabolic process
CAB88_27020	COG1447	Phosphotransferase system cellobiose-specific component IIA
CAB88_27025	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CAB88_27045	COG1447	Phosphotransferase system cellobiose-specific component IIA
CAB88_27055	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CAB88_27060	COG1301	dicarboxylic acid transport
CAB88_27075	COG1511	domain protein
CAB88_27080	COG0583	DNA-binding transcription factor activity
CAB88_27085	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CAB88_27095	COG1271	oxidase subunit
CAB88_27100	COG1294	oxidase, subunit
CAB88_27105	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CAB88_27140	COG1620	l-lactate permease
CAB88_27150	COG2389	metal-binding protein
CAB88_27165	COG1368	sulfuric ester hydrolase activity
CAB88_27180	COG0791	NLP P60 protein
CAB88_27180	COG1388	LysM domain
CAB88_27185	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CAB88_27195	COG1215	transferase activity, transferring glycosyl groups
CAB88_27205	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CAB88_27215	COG3584	3D domain protein
CAB88_27215	COG1388	LysM domain
CAB88_27240	COG4715	Zinc finger, swim domain protein
CAB88_27245	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CAB88_27255	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_27285	COG1191	sigma factor activity
CAB88_27295	COG0577	efflux transmembrane transporter activity
CAB88_27300	COG1136	(ABC) transporter
CAB88_27335	COG5002	protein histidine kinase activity
CAB88_27340	COG0745	RESPONSE REGULATOR receiver
CAB88_27345	COG1482	cell wall glycoprotein biosynthetic process
CAB88_27350	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB88_27350	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_27350	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CAB88_27355	COG3711	transcriptional antiterminator
CAB88_27355	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CAB88_27360	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CAB88_27375	COG1482	cell wall glycoprotein biosynthetic process
CAB88_27380	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CAB88_27380	COG0662	Cupin 2, conserved barrel domain protein
CAB88_27395	COG0438	transferase activity, transferring glycosyl groups
CAB88_27405	COG0438	transferase activity, transferring glycosyl groups
CAB88_27405	COG0297	glycogen (starch) synthase activity
CAB88_27410	COG0110	maltose O-acetyltransferase activity
CAB88_27430	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CAB88_27435	COG4464	protein tyrosine phosphatase activity
CAB88_27440	COG0489	protein tyrosine kinase activity
CAB88_27445	COG3944	biosynthesis protein
CAB88_27450	COG0489	protein tyrosine kinase activity
CAB88_27465	COG1609	Transcriptional regulator
CAB88_27480	COG0739	heme binding
CAB88_27495	COG3279	Response regulator of the LytR AlgR family
CAB88_27500	COG2385	sporulation resulting in formation of a cellular spore
CAB88_27505	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CAB88_27515	COG4836	Membrane
CAB88_27520	COG1007	ATP synthesis coupled electron transport
CAB88_27525	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CAB88_27530	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CAB88_27540	COG0839	Belongs to the complex I subunit 6 family
CAB88_27560	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CAB88_27575	COG5001	Diguanylate cyclase
CAB88_27575	COG3300	MHYT domain
CAB88_27625	COG0356	it plays a direct role in the translocation of protons across the membrane
CAB88_27665	COG0698	ribose 5-phosphate isomerase
CAB88_27680	COG2190	(PTS) system
CAB88_27685	COG2259	Doxx family
CAB88_27690	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CAB88_27710	COG0009	L-threonylcarbamoyladenylate synthase
CAB88_27730	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CAB88_27750	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CAB88_27755	COG1494	fructose-1,6-bisphosphatase
CAB88_27780	COG4821	SIS domain
CAB88_27800	COG1960	acyl-CoA dehydrogenase activity
CAB88_27805	COG1960	acyl-CoA dehydrogenase activity
CAB88_27810	COG1250	3-hydroxyacyl-CoA dehydrogenase
CAB88_27815	COG0183	Belongs to the thiolase family
CAB88_27820	COG2181	nitrate reductase activity
CAB88_27820	COG0247	lactate metabolic process
CAB88_27825	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CAB88_27835	COG5001	Diguanylate cyclase
CAB88_27835	COG3300	MHYT domain
CAB88_27850	COG3227	Zinc metalloprotease (Elastase)
CAB88_27855	COG2197	response regulator
CAB88_27860	COG4585	Histidine kinase
CAB88_27865	COG0842	Transport permease protein
CAB88_27870	COG1131	(ABC) transporter
CAB88_27875	COG0024	Methionine aminopeptidase
CAB88_27885	COG2234	aminopeptidase activity
CAB88_27905	COG1595	DNA-templated transcription, initiation
CAB88_27920	COG4506	Protein conserved in bacteria
CAB88_27925	COG1619	proteins homologs of microcin C7 resistance protein MccF
CAB88_27950	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CAB88_27955	COG2814	Major facilitator Superfamily
CAB88_27960	COG0789	Transcriptional regulator
CAB88_27965	COG0584	glycerophosphoryl diester phosphodiesterase
CAB88_27970	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CAB88_27980	COG1994	Peptidase M50
CAB88_27990	COG1078	dGTPase activity
CAB88_27995	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CAB88_28000	COG1120	ATPase activity
CAB88_28005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_28010	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CAB88_28030	COG0280	phosphate acetyltransferase
CAB88_28045	COG3773	Cell wall hydrolase
CAB88_28055	COG2363	Small membrane protein
CAB88_28065	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CAB88_28070	COG2233	PERMEase
CAB88_28075	COG0561	phosphatase activity
CAB88_28080	COG2814	Major facilitator Superfamily
CAB88_28090	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CAB88_28095	COG1131	(ABC) transporter
CAB88_28100	COG2755	lipolytic protein G-D-S-L family
CAB88_28105	COG1609	Transcriptional regulator
CAB88_28115	COG0460	homoserine dehydrogenase
CAB88_28135	COG1011	Hydrolase
CAB88_28140	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CAB88_28150	COG2197	response regulator
CAB88_28155	COG2203	Gaf domain
CAB88_28155	COG4585	Histidine kinase
CAB88_28160	COG0351	phosphomethylpyrimidine kinase
CAB88_28165	COG3706	GGDEF domain
CAB88_28170	COG2879	small protein
CAB88_28175	COG1966	Carbon starvation protein
CAB88_28180	COG3279	Response regulator of the LytR AlgR family
CAB88_28185	COG0477	Major facilitator Superfamily
CAB88_28200	COG0438	transferase activity, transferring glycosyl groups
CAB88_28215	COG0840	transmembrane signaling receptor activity
CAB88_28225	COG1607	acyl-coa hydrolase
CAB88_28230	COG1216	Glycosyl transferase, family 2
CAB88_28240	COG1216	Glycosyl transferase, family 2
CAB88_28250	COG4485	Bacterial membrane protein, YfhO
CAB88_28255	COG0463	Glycosyl transferase, family 2
CAB88_28265	COG1309	transcriptional regulator
CAB88_28270	COG0488	(ABC) transporter
CAB88_28275	COG1309	transcriptional regulator
CAB88_28280	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CAB88_28285	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CAB88_28285	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CAB88_28290	COG0628	permease
CAB88_28310	COG3275	phosphorelay sensor kinase activity
CAB88_28315	COG2814	Major facilitator Superfamily
CAB88_28320	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CAB88_28325	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CAB88_28355	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CAB88_28360	COG1272	protein, Hemolysin III
CAB88_28380	COG1164	Oligoendopeptidase f
CAB88_28390	COG5002	protein histidine kinase activity
CAB88_28405	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CAB88_28410	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CAB88_28415	COG4853	Protein conserved in bacteria
CAB88_28425	COG5002	protein histidine kinase activity
CAB88_28430	COG0745	RESPONSE REGULATOR receiver
CAB88_28460	COG0305	Participates in initiation and elongation during chromosome replication
CAB88_28470	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CAB88_28475	COG4241	membrane
CAB88_28485	COG0629	single-stranded DNA binding
CAB88_28495	COG0012	GTP binding
CAB88_28500	COG4481	Protein conserved in bacteria
CAB88_28505	COG0668	transmembrane transport
CAB88_28515	COG1475	DNA binding
CAB88_28520	COG1192	Involved in chromosome partitioning
CAB88_28545	COG1847	R3H domain protein
CAB88_28550	COG0706	membrane insertase activity
CAB88_28570	COG0592	DNA-directed DNA polymerase activity
CAB88_28575	COG2501	S4 domain
CAB88_28585	COG0187	DNA topoisomerase II activity
CAB88_28590	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CAB88_28625	COG0516	GMP reductase activity
CAB88_28625	COG0517	IMP dehydrogenase activity
CAB88_28630	COG1686	Belongs to the peptidase S11 family
CAB88_28660	COG1428	Deoxynucleoside kinase
CAB88_28665	COG1428	Deoxynucleoside kinase
CAB88_28670	COG1335	isochorismatase
CAB88_28680	COG0590	tRNA wobble adenosine to inosine editing
CAB88_28690	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CAB88_28750	COG1982	Orn Lys Arg decarboxylase major
CAB88_28760	COG0470	DNA polymerase III
CAB88_28765	COG1774	PSP1 C-terminal conserved region
CAB88_28775	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CAB88_28785	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CAB88_28790	COG2002	toxin-antitoxin pair type II binding
CAB88_28800	COG0084	hydrolase, TatD family'
CAB88_28820	COG4466	Protein conserved in bacteria
CAB88_28835	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CAB88_28845	COG0251	oxidation-reduction process
CAB88_28860	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CAB88_28875	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CAB88_28880	COG2002	toxin-antitoxin pair type II binding
CAB88_28885	COG2244	polysaccharide biosynthetic process
CAB88_28890	COG3956	TIGRFAM MazG family protein
CAB88_28895	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CAB88_28915	COG1098	S1 RNA binding domain
CAB88_28930	COG2208	phosphoserine phosphatase activity
CAB88_28945	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CAB88_28960	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CAB88_28965	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CAB88_28970	COG0512	Glutamine amidotransferase of anthranilate synthase
CAB88_28975	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CAB88_28980	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CAB88_28985	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CAB88_28990	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CAB88_28995	COG1396	sequence-specific DNA binding
CAB88_29000	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CAB88_29115	COG1136	(ABC) transporter
CAB88_29120	COG3344	reverse transcriptase
CAB88_29175	COG1674	ftsk spoiiie
CAB88_29180	COG3344	reverse transcriptase
CAB88_29440	COG3331	DNA recombination
CAB88_29480	COG3344	reverse transcriptase
CAB88_29500	COG3344	reverse transcriptase
CAB88_29520	COG3344	reverse transcriptase
CAB88_29570	COG2311	Membrane
CAB88_29615	COG1378	Sugar-specific transcriptional regulator TrmB
CAB88_29630	COG0531	amino acid
CAB88_29640	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CAB88_29645	COG2808	Putative FMN-binding domain
CAB88_29650	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_29655	COG2364	Membrane
CAB88_29660	COG1846	Transcriptional regulator
CAB88_29665	COG0456	acetyltransferase
CAB88_29685	COG0583	DNA-binding transcription factor activity
CAB88_29700	COG0367	asparagine synthase
CAB88_29705	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CAB88_29730	COG1819	glycosyl
CAB88_29740	COG0789	Transcriptional regulator
CAB88_29745	COG5504	Zn-dependent protease
CAB88_29760	COG3344	reverse transcriptase
CAB88_29770	COG2072	flavoprotein involved in K transport
CAB88_29775	COG0697	spore germination
CAB88_29780	COG1522	sequence-specific DNA binding
CAB88_29825	COG0776	regulation of translation
CAB88_29830	COG2002	toxin-antitoxin pair type II binding
CAB88_29855	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_29875	COG0697	spore germination
CAB88_29885	COG1802	Transcriptional regulator
CAB88_29890	COG0697	spore germination
CAB88_29900	COG2211	Major facilitator Superfamily
CAB88_29905	COG2366	antibiotic biosynthetic process
CAB88_29955	COG2423	ornithine cyclodeaminase activity
CAB88_29970	COG0776	regulation of translation
CAB88_29985	COG2002	toxin-antitoxin pair type II binding
CAB88_29990	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CAB88_29995	COG0438	transferase activity, transferring glycosyl groups
CAB88_30000	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CAB88_30015	COG0438	transferase activity, transferring glycosyl groups
CAB88_30020	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CAB88_30025	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CAB88_30030	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CAB88_30035	COG3104	oligopeptide transport
CAB88_30045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CAB88_30055	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_30090	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_30145	COG4935	Belongs to the peptidase S8 family
CAB88_30145	COG1404	Belongs to the peptidase S8 family
CAB88_30160	COG1404	Belongs to the peptidase S8 family
CAB88_30195	COG2304	oxidoreductase activity
CAB88_30200	COG1309	transcriptional regulator
CAB88_30205	COG2814	Major facilitator Superfamily
CAB88_30210	COG1760	l-serine dehydratase
CAB88_30215	COG1760	l-serine dehydratase
CAB88_30220	COG0814	amino acid
CAB88_30235	COG0840	transmembrane signaling receptor activity
CAB88_30255	COG1309	transcriptional regulator
CAB88_30265	COG1278	Cold shock
CAB88_30280	COG1329	Transcriptional regulator
CAB88_30305	COG0697	spore germination
CAB88_30310	COG1802	Transcriptional regulator
CAB88_30325	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CAB88_30330	COG0772	Belongs to the SEDS family
CAB88_30340	COG2239	Acts as a magnesium transporter
CAB88_30350	COG1876	peptidase activity
CAB88_30355	COG0860	N-Acetylmuramoyl-L-alanine amidase
CAB88_30355	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_30375	COG5634	Uncharacterized conserved protein (DUF2278)
CAB88_30380	COG1404	Belongs to the peptidase S8 family
CAB88_30400	COG4974	Belongs to the 'phage' integrase family
CAB88_30440	COG5002	protein histidine kinase activity
CAB88_30445	COG0745	RESPONSE REGULATOR receiver
CAB88_30460	COG2814	Major facilitator Superfamily
CAB88_30465	COG1309	transcriptional regulator
CAB88_30490	COG2259	Doxx family
CAB88_30495	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_30520	COG2814	Major facilitator Superfamily
CAB88_30535	COG2205	protein histidine kinase activity
CAB88_30540	COG0745	RESPONSE REGULATOR receiver
CAB88_30550	COG1136	(ABC) transporter
CAB88_30570	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CAB88_30575	COG1252	NADH dehydrogenase
CAB88_30590	COG4641	Protein conserved in bacteria
CAB88_30620	COG2089	acid synthase
CAB88_30635	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CAB88_30640	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CAB88_30645	COG1088	dTDP-glucose 4,6-dehydratase activity
CAB88_30650	COG1086	Polysaccharide biosynthesis protein
CAB88_30655	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CAB88_30660	COG0463	Glycosyl transferase, family 2
CAB88_30665	COG0463	Glycosyl transferase, family 2
CAB88_30675	COG0457	Tetratricopeptide repeat
CAB88_30735	COG0494	nUDIX hydrolase
CAB88_30785	COG0730	response to heat
CAB88_30820	COG0582	viral genome integration into host DNA
CAB88_30825	COG0567	Dehydrogenase, E1 component
CAB88_30830	COG0471	metal ion transport
CAB88_30860	COG4565	transcriptional regulatory protein
CAB88_30865	COG3290	protein histidine kinase activity
CAB88_30890	COG0457	Tetratricopeptide repeat
CAB88_30925	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CAB88_31005	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CAB88_31095	COG0457	Tetratricopeptide repeat
CAB88_31120	COG1131	(ABC) transporter
CAB88_31125	COG1132	(ABC) transporter
CAB88_31145	COG1475	DNA binding
CAB88_31175	COG0738	Major facilitator superfamily
CAB88_31180	COG0673	inositol 2-dehydrogenase activity
CAB88_31185	COG0561	phosphatase activity
CAB88_31190	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CAB88_31195	COG1609	Transcriptional regulator
CAB88_31230	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CAB88_31235	COG3321	synthase
CAB88_31235	COG0300	oxidoreductase activity
CAB88_31235	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_31235	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB88_31235	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_31250	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CAB88_31255	COG1250	3-hydroxyacyl-CoA dehydrogenase
CAB88_31270	COG1960	acyl-CoA dehydrogenase activity
CAB88_31290	COG3321	synthase
CAB88_31290	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_31290	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_31290	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB88_31290	COG1028	Short-chain dehydrogenase reductase Sdr
CAB88_31290	COG0300	oxidoreductase activity
CAB88_31290	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CAB88_31290	COG0318	PFAM AMP-dependent synthetase and ligase
CAB88_31290	COG0300	oxidoreductase activity
CAB88_31290	COG3321	synthase
CAB88_31310	COG0791	NLP P60 protein
CAB88_31310	COG1388	LysM domain
CAB88_31315	COG1388	LysM domain
CAB88_31315	COG3584	3D domain protein
CAB88_31355	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_31370	COG1388	LysM domain
CAB88_31370	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_31370	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_31375	COG0739	heme binding
CAB88_31410	COG5634	Uncharacterized conserved protein (DUF2278)
CAB88_31415	COG2234	aminopeptidase activity
CAB88_31440	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CAB88_31465	COG0542	response to heat
CAB88_31470	COG0494	nUDIX hydrolase
CAB88_31475	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CAB88_31485	COG0457	Tetratricopeptide repeat
CAB88_31535	COG1132	(ABC) transporter
CAB88_31635	COG3344	reverse transcriptase
CAB88_31705	COG0739	heme binding
CAB88_31750	COG0457	Tetratricopeptide repeat
CAB88_32010	COG0776	regulation of translation
CAB88_32060	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
CAB88_32060	COG0778	Nitroreductase
CAB88_32070	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CAB88_32110	COG4974	Belongs to the 'phage' integrase family
CAB88_32180	COG0741	lytic transglycosylase activity
CAB88_32180	COG0791	NLP P60 protein
CAB88_32265	COG3331	DNA recombination
CAB88_32445	COG0457	Tetratricopeptide repeat
CAB88_32450	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_32480	COG3547	Transposase (IS116 IS110 IS902 family)
CAB88_32590	COG4653	Phage capsid family
CAB88_32595	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CAB88_32635	COG3344	reverse transcriptase
CAB88_32655	COG3331	DNA recombination
CAB88_32940	COG0457	Tetratricopeptide repeat
CAB88_32950	COG1923	regulation of RNA biosynthetic process
CAB88_33035	COG3409	Peptidoglycan-binding domain 1 protein
CAB88_33035	COG5632	N-Acetylmuramoyl-L-alanine amidase
CAB88_33205	COG3344	reverse transcriptase
CAB88_33240	COG0791	NLP P60 protein
CAB88_33240	COG0741	lytic transglycosylase activity