CAB88_00125 SM00382 ATPases associated with a variety of cellular activities CAB88_00125 SM00930 CAB88_00125 CAB88_00135 SM00829 Enoylreductase CAB88_00190 SM00382 ATPases associated with a variety of cellular activities CAB88_00195 SM00382 ATPases associated with a variety of cellular activities CAB88_00295 SM00563 Phosphate acyltransferases CAB88_00310 SM00354 helix_turn _helix lactose operon repressor CAB88_00365 SM00382 ATPases associated with a variety of cellular activities CAB88_00395 SM00382 ATPases associated with a variety of cellular activities CAB88_00400 SM00382 ATPases associated with a variety of cellular activities CAB88_00475 SM00487 DEAD-like helicases superfamily CAB88_00475 SM00490 helicase superfamily c-terminal domain CAB88_00500 SM01005 Alanine racemase, C-terminal domain CAB88_00515 SM00316 Ribosomal protein S1-like RNA-binding domain CAB88_00515 SM00732 Likely ribonuclease with RNase H fold. CAB88_00525 SM00731 SprT homologues. CAB88_00635 SM00382 ATPases associated with a variety of cellular activities CAB88_00640 SM00881 CoA binding domain CAB88_00655 SM00883 Chaperonin 10 Kd subunit CAB88_00670 SM00860 SMI1 / KNR4 family CAB88_00685 SM00448 cheY-homologous receiver domain CAB88_00685 SM00862 Transcriptional regulatory protein, C terminal CAB88_00690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_00690 SM00387 Histidine kinase-like ATPases CAB88_00690 SM00388 His Kinase A (phosphoacceptor) domain CAB88_00745 SM00382 ATPases associated with a variety of cellular activities CAB88_00830 SM01001 AIR carboxylase CAB88_00840 SM00998 Adenylosuccinate lyase C-terminus CAB88_00855 SM01211 CAB88_00855 CAB88_00880 SM00798 AICARFT/IMPCHase bienzyme CAB88_00880 SM00851 MGS-like domain CAB88_00885 SM01209 CAB88_00885 CAB88_00885 SM01210 CAB88_00885 CAB88_00905 SM00244 prohibitin homologues CAB88_00925 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAB88_00925 SM00292 breast cancer carboxy-terminal domain CAB88_00925 SM00532 Ligase N family CAB88_00950 SM00382 ATPases associated with a variety of cellular activities CAB88_00950 SM00930 CAB88_00950 CAB88_00980 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_01000 SM00845 GatB domain CAB88_01005 SM00046 Diacylglycerol kinase catalytic domain (presumed) CAB88_01020 SM00382 ATPases associated with a variety of cellular activities CAB88_01085 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CAB88_01135 SM01007 Class II Aldolase and Adducin N-terminal domain CAB88_01205 SM00387 Histidine kinase-like ATPases CAB88_01205 SM00388 His Kinase A (phosphoacceptor) domain CAB88_01250 SM00062 Bacterial periplasmic substrate-binding proteins CAB88_01250 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CAB88_01255 SM00382 ATPases associated with a variety of cellular activities CAB88_01260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_01260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_01290 SM00100 Cyclic nucleotide-monophosphate binding domain CAB88_01290 SM00419 helix_turn_helix, cAMP Regulatory protein CAB88_01305 SM00642 Alpha-amylase domain CAB88_01325 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAB88_01325 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAB88_01325 SM00493 CAB88_01325 CAB88_01345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_01345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_01370 SM00382 ATPases associated with a variety of cellular activities CAB88_01375 SM00382 ATPases associated with a variety of cellular activities CAB88_01380 SM00060 Fibronectin type 3 domain CAB88_01380 SM00636 CAB88_01380 CAB88_01380 SM00637 CAB88_01380 CAB88_01420 SM00530 Helix-turn-helix XRE-family like proteins CAB88_01440 SM00946 Prolyl-tRNA synthetase, C-terminal CAB88_01485 SM00831 Cation transporter/ATPase, N-terminus CAB88_01495 SM00226 Low molecular weight phosphatase family CAB88_01590 SM00478 endonuclease III CAB88_01610 SM00382 ATPases associated with a variety of cellular activities CAB88_01630 SM00530 Helix-turn-helix XRE-family like proteins CAB88_01680 SM00984 UDP binding domain CAB88_01765 SM00478 endonuclease III CAB88_01765 SM00525 CAB88_01765 CAB88_01790 SM00382 ATPases associated with a variety of cellular activities CAB88_01810 SM00382 ATPases associated with a variety of cellular activities CAB88_01975 SM00567 E-Z type HEAT repeats CAB88_01990 SM00052 Putative diguanylate phosphodiesterase CAB88_01990 SM00091 PAS domain CAB88_01990 SM00267 diguanylate cyclase CAB88_02000 SM00763 PrkA AAA domain CAB88_02015 SM00365 Leucine-rich repeat, SDS22-like subfamily CAB88_02015 SM00369 Leucine-rich repeats, typical (most populated) subfamily CAB88_02015 SM00725 NEAr Transporter domain CAB88_02030 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CAB88_02040 SM00244 prohibitin homologues CAB88_02045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_02045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_02050 SM00091 PAS domain CAB88_02050 SM00387 Histidine kinase-like ATPases CAB88_02055 SM00448 cheY-homologous receiver domain CAB88_02075 SM00248 ankyrin repeats CAB88_02090 SM00382 ATPases associated with a variety of cellular activities CAB88_02115 SM00448 cheY-homologous receiver domain CAB88_02115 SM00862 Transcriptional regulatory protein, C terminal CAB88_02120 SM00387 Histidine kinase-like ATPases CAB88_02120 SM00388 His Kinase A (phosphoacceptor) domain CAB88_02135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_02135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_02140 SM00387 Histidine kinase-like ATPases CAB88_02145 SM00448 cheY-homologous receiver domain CAB88_02155 SM00919 Malic enzyme, NAD binding domain CAB88_02155 SM01274 CAB88_02155 CAB88_02170 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_02180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_02180 SM00387 Histidine kinase-like ATPases CAB88_02180 SM00388 His Kinase A (phosphoacceptor) domain CAB88_02185 SM00448 cheY-homologous receiver domain CAB88_02185 SM00862 Transcriptional regulatory protein, C terminal CAB88_02205 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAB88_02205 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CAB88_02220 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CAB88_02220 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CAB88_02230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_02300 SM01091 Transporter associated domain CAB88_02320 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_02350 SM00382 ATPases associated with a variety of cellular activities CAB88_02365 SM00507 HNH nucleases CAB88_02385 SM00327 von Willebrand factor (vWF) type A domain CAB88_02390 SM00382 ATPases associated with a variety of cellular activities CAB88_02395 SM00155 Phospholipase D. Active site motifs. CAB88_02410 SM00052 Putative diguanylate phosphodiesterase CAB88_02410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAB88_02410 SM00267 diguanylate cyclase CAB88_02420 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_02420 SM00866 CAB88_02420 CAB88_02430 SM00642 Alpha-amylase domain CAB88_02470 SM00382 ATPases associated with a variety of cellular activities CAB88_02475 SM00062 Bacterial periplasmic substrate-binding proteins CAB88_02475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CAB88_02525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_02525 SM00387 Histidine kinase-like ATPases CAB88_02525 SM00388 His Kinase A (phosphoacceptor) domain CAB88_02530 SM00448 cheY-homologous receiver domain CAB88_02530 SM00862 Transcriptional regulatory protein, C terminal CAB88_02580 SM00382 ATPases associated with a variety of cellular activities CAB88_02585 SM00382 ATPases associated with a variety of cellular activities CAB88_02595 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_02605 SM00354 helix_turn _helix lactose operon repressor CAB88_02620 SM00382 ATPases associated with a variety of cellular activities CAB88_02655 SM00829 Enoylreductase CAB88_02665 SM00770 Zinc dependent phospholipase C (alpha toxin) CAB88_02685 SM00530 Helix-turn-helix XRE-family like proteins CAB88_02695 SM00530 Helix-turn-helix XRE-family like proteins CAB88_02745 SM00382 ATPases associated with a variety of cellular activities CAB88_02785 SM01040 BRO family, N-terminal domain CAB88_02810 SM00857 Resolvase, N terminal domain CAB88_02905 SM00287 Bacterial SH3 domain homologues CAB88_02905 SM00644 CAB88_02905 CAB88_02970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_02980 SM00530 Helix-turn-helix XRE-family like proteins CAB88_03030 SM00530 Helix-turn-helix XRE-family like proteins CAB88_03120 SM00382 ATPases associated with a variety of cellular activities CAB88_03145 SM00899 CAB88_03145 CAB88_03295 SM00116 Domain in cystathionine beta-synthase and other proteins. CAB88_03315 SM00287 Bacterial SH3 domain homologues CAB88_03325 SM00382 ATPases associated with a variety of cellular activities CAB88_03415 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_03455 SM00640 Glycosyl hydrolases family 32 CAB88_03465 SM00354 helix_turn _helix lactose operon repressor CAB88_03530 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_03550 SM00450 Rhodanese Homology Domain CAB88_03560 SM00450 Rhodanese Homology Domain CAB88_03565 SM00450 Rhodanese Homology Domain CAB88_03565 SM00849 Metallo-beta-lactamase superfamily CAB88_03575 SM00450 Rhodanese Homology Domain CAB88_03580 SM00450 Rhodanese Homology Domain CAB88_03605 SM00829 Enoylreductase CAB88_03660 SM00287 Bacterial SH3 domain homologues CAB88_03670 SM00382 ATPases associated with a variety of cellular activities CAB88_03725 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CAB88_03825 SM00344 helix_turn_helix ASNC type CAB88_03840 SM00422 helix_turn_helix, mercury resistance CAB88_03900 SM01060 CAB88_03900 CAB88_03945 SM00382 ATPases associated with a variety of cellular activities CAB88_03950 SM00382 ATPases associated with a variety of cellular activities CAB88_03960 SM00062 Bacterial periplasmic substrate-binding proteins CAB88_03960 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CAB88_03970 SM00382 ATPases associated with a variety of cellular activities CAB88_04050 SM00644 CAB88_04050 CAB88_04055 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_04090 SM00047 Lysozyme subfamily 2 CAB88_04130 SM00646 CAB88_04130 CAB88_04175 SM00382 ATPases associated with a variety of cellular activities CAB88_04180 SM00382 ATPases associated with a variety of cellular activities CAB88_04210 SM00849 Metallo-beta-lactamase superfamily CAB88_04240 SM00091 PAS domain CAB88_04240 SM00387 Histidine kinase-like ATPases CAB88_04245 SM00448 cheY-homologous receiver domain CAB88_04260 SM00487 DEAD-like helicases superfamily CAB88_04260 SM00490 helicase superfamily c-terminal domain CAB88_04330 SM00894 Excalibur calcium-binding domain CAB88_04395 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_04420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_04445 SM01120 CAB88_04445 CAB88_04450 SM00287 Bacterial SH3 domain homologues CAB88_04470 SM00530 Helix-turn-helix XRE-family like proteins CAB88_04480 SM00382 ATPases associated with a variety of cellular activities CAB88_04505 SM00460 Transglutaminase/protease-like homologues CAB88_04610 SM00331 Sigma factor PP2C-like phosphatases CAB88_04610 SM00448 cheY-homologous receiver domain CAB88_04615 SM00138 Methyltransferase, chemotaxis proteins CAB88_04620 SM00387 Histidine kinase-like ATPases CAB88_04620 SM00388 His Kinase A (phosphoacceptor) domain CAB88_04620 SM00448 cheY-homologous receiver domain CAB88_04660 SM00507 HNH nucleases CAB88_04665 SM00829 Enoylreductase CAB88_04700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAB88_04770 SM00835 Cupin CAB88_04775 SM00530 Helix-turn-helix XRE-family like proteins CAB88_04860 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_04880 SM00382 ATPases associated with a variety of cellular activities CAB88_05090 SM00354 helix_turn _helix lactose operon repressor CAB88_05100 SM00849 Metallo-beta-lactamase superfamily CAB88_05140 SM00382 ATPases associated with a variety of cellular activities CAB88_05160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAB88_05175 SM00342 helix_turn_helix, arabinose operon control protein CAB88_05175 SM00871 Bacterial transcription activator, effector binding domain CAB88_05190 SM00387 Histidine kinase-like ATPases CAB88_05190 SM00388 His Kinase A (phosphoacceptor) domain CAB88_05195 SM00448 cheY-homologous receiver domain CAB88_05195 SM00862 Transcriptional regulatory protein, C terminal CAB88_05220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_05220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_05260 SM00357 Cold shock protein domain CAB88_05375 SM01060 CAB88_05375 CAB88_05390 SM00642 Alpha-amylase domain CAB88_05395 SM00530 Helix-turn-helix XRE-family like proteins CAB88_05410 SM00316 Ribosomal protein S1-like RNA-binding domain CAB88_05455 SM00382 ATPases associated with a variety of cellular activities CAB88_05455 SM01086 C-terminal, D2-small domain, of ClpB protein CAB88_05485 SM00825 Beta-ketoacyl synthase CAB88_05530 SM00382 ATPases associated with a variety of cellular activities CAB88_05535 SM00382 ATPases associated with a variety of cellular activities CAB88_05580 SM00155 Phospholipase D. Active site motifs. CAB88_05620 SM01118 CAB88_05620 CAB88_05630 SM00954 Region found in RelA / SpoT proteins CAB88_05860 SM01324 CAB88_05860 CAB88_05915 SM00861 Transketolase, pyrimidine binding domain CAB88_05920 SM00530 Helix-turn-helix XRE-family like proteins CAB88_06020 SM00530 Helix-turn-helix XRE-family like proteins CAB88_06040 SM00382 ATPases associated with a variety of cellular activities CAB88_06060 SM00014 Acid phosphatase homologues CAB88_06110 SM00448 cheY-homologous receiver domain CAB88_06110 SM00862 Transcriptional regulatory protein, C terminal CAB88_06115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_06115 SM00387 Histidine kinase-like ATPases CAB88_06115 SM00388 His Kinase A (phosphoacceptor) domain CAB88_06120 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_06120 SM00895 CAB88_06120 CAB88_06190 SM00822 CAB88_06190 CAB88_06230 SM00382 ATPases associated with a variety of cellular activities CAB88_06255 SM00420 helix_turn_helix, Deoxyribose operon repressor CAB88_06255 SM01134 CAB88_06255 CAB88_06265 SM00365 Leucine-rich repeat, SDS22-like subfamily CAB88_06265 SM00369 Leucine-rich repeats, typical (most populated) subfamily CAB88_06265 SM00725 NEAr Transporter domain CAB88_06270 SM01007 Class II Aldolase and Adducin N-terminal domain CAB88_06290 SM00387 Histidine kinase-like ATPases CAB88_06290 SM00388 His Kinase A (phosphoacceptor) domain CAB88_06295 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_06315 SM00387 Histidine kinase-like ATPases CAB88_06315 SM00388 His Kinase A (phosphoacceptor) domain CAB88_06395 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_06400 SM00382 ATPases associated with a variety of cellular activities CAB88_06410 SM00382 ATPases associated with a variety of cellular activities CAB88_06430 SM00344 helix_turn_helix ASNC type CAB88_06555 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_06630 SM00917 LeuA allosteric (dimerisation) domain CAB88_06635 SM01329 CAB88_06635 CAB88_06820 SM00387 Histidine kinase-like ATPases CAB88_06825 SM00421 helix_turn_helix, Lux Regulon CAB88_06825 SM00448 cheY-homologous receiver domain CAB88_06920 SM00091 PAS domain CAB88_06920 SM00387 Histidine kinase-like ATPases CAB88_06920 SM00388 His Kinase A (phosphoacceptor) domain CAB88_06940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_06940 SM00387 Histidine kinase-like ATPases CAB88_06940 SM00388 His Kinase A (phosphoacceptor) domain CAB88_06995 SM00363 S4 RNA-binding domain CAB88_07015 SM00448 cheY-homologous receiver domain CAB88_07015 SM00862 Transcriptional regulatory protein, C terminal CAB88_07020 SM00091 PAS domain CAB88_07020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_07020 SM00387 Histidine kinase-like ATPases CAB88_07020 SM00388 His Kinase A (phosphoacceptor) domain CAB88_07030 SM00257 Lysin motif CAB88_07055 SM00487 DEAD-like helicases superfamily CAB88_07055 SM00490 helicase superfamily c-terminal domain CAB88_07065 SM00257 Lysin motif CAB88_07075 SM00422 helix_turn_helix, mercury resistance CAB88_07085 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CAB88_07100 SM00644 CAB88_07100 CAB88_07110 SM00870 CAB88_07110 CAB88_07125 SM00316 Ribosomal protein S1-like RNA-binding domain CAB88_07130 SM01240 CAB88_07130 CAB88_07185 SM00411 bacterial (prokaryotic) histone like domain CAB88_07210 SM00562 CAB88_07210 CAB88_07230 SM00028 Tetratricopeptide repeats CAB88_07235 SM00914 CAB88_07235 CAB88_07280 SM00986 Uracil DNA glycosylase superfamily CAB88_07280 SM00987 UreE urease accessory protein, C-terminal domain CAB88_07300 SM00851 MGS-like domain CAB88_07350 SM00479 CAB88_07350 CAB88_07350 SM00487 DEAD-like helicases superfamily CAB88_07350 SM00491 CAB88_07350 CAB88_07375 SM00478 endonuclease III CAB88_07385 SM00060 Fibronectin type 3 domain CAB88_07445 SM00981 CAB88_07445 CAB88_07455 SM00491 CAB88_07455 CAB88_07515 SM00450 Rhodanese Homology Domain CAB88_07555 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CAB88_07555 SM00475 5'-3' exonuclease CAB88_07665 SM00357 Cold shock protein domain CAB88_07715 SM00422 helix_turn_helix, mercury resistance CAB88_07715 SM00871 Bacterial transcription activator, effector binding domain CAB88_07765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_07810 SM00448 cheY-homologous receiver domain CAB88_07815 SM00073 Histidine Phosphotransfer domain CAB88_07815 SM00260 Two component signalling adaptor domain CAB88_07815 SM00387 Histidine kinase-like ATPases CAB88_07815 SM01231 CAB88_07815 CAB88_07835 SM00138 Methyltransferase, chemotaxis proteins CAB88_07910 SM00382 ATPases associated with a variety of cellular activities CAB88_07945 SM00260 Two component signalling adaptor domain CAB88_07945 SM00448 cheY-homologous receiver domain CAB88_08015 SM00382 ATPases associated with a variety of cellular activities CAB88_08015 SM00962 SRP54-type protein, GTPase domain CAB88_08030 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_08080 SM00530 Helix-turn-helix XRE-family like proteins CAB88_08100 SM00382 ATPases associated with a variety of cellular activities CAB88_08115 SM00849 Metallo-beta-lactamase superfamily CAB88_08115 SM01027 Beta-Casp domain CAB88_08155 SM00855 Phosphoglycerate mutase family CAB88_08175 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_08215 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_08215 SM00895 CAB88_08215 CAB88_08230 SM00833 Cobalamin synthesis protein cobW C-terminal domain CAB88_08260 SM00422 helix_turn_helix, mercury resistance CAB88_08325 SM00028 Tetratricopeptide repeats CAB88_08335 SM00530 Helix-turn-helix XRE-family like proteins CAB88_08375 SM00421 helix_turn_helix, Lux Regulon CAB88_08375 SM00448 cheY-homologous receiver domain CAB88_08385 SM00382 ATPases associated with a variety of cellular activities CAB88_08400 SM00155 Phospholipase D. Active site motifs. CAB88_08420 SM00919 Malic enzyme, NAD binding domain CAB88_08420 SM01274 CAB88_08420 CAB88_08425 SM00387 Histidine kinase-like ATPases CAB88_08430 SM00448 cheY-homologous receiver domain CAB88_08435 SM00487 DEAD-like helicases superfamily CAB88_08435 SM00490 helicase superfamily c-terminal domain CAB88_08455 SM00530 Helix-turn-helix XRE-family like proteins CAB88_08650 SM00854 Bacterial capsule synthesis protein PGA_cap CAB88_08680 SM00850 LytTr DNA-binding domain CAB88_08725 SM00448 cheY-homologous receiver domain CAB88_08725 SM00862 Transcriptional regulatory protein, C terminal CAB88_08730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_08730 SM00387 Histidine kinase-like ATPases CAB88_08730 SM00388 His Kinase A (phosphoacceptor) domain CAB88_08750 SM00450 Rhodanese Homology Domain CAB88_08790 SM01276 CAB88_08790 CAB88_08840 SM01133 CAB88_08840 CAB88_08850 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CAB88_08895 SM01011 Aminopeptidase P, N-terminal domain CAB88_08920 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAB88_08920 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAB88_08920 SM00493 CAB88_08920 CAB88_08995 SM00530 Helix-turn-helix XRE-family like proteins CAB88_09015 SM00530 Helix-turn-helix XRE-family like proteins CAB88_09080 SM00487 DEAD-like helicases superfamily CAB88_09080 SM00490 helicase superfamily c-terminal domain CAB88_09100 SM00482 DNA polymerase A domain CAB88_09190 SM00966 SpoVT / AbrB like domain CAB88_09225 SM00857 Resolvase, N terminal domain CAB88_09360 SM00530 Helix-turn-helix XRE-family like proteins CAB88_09405 SM00857 Resolvase, N terminal domain CAB88_09445 SM00833 Cobalamin synthesis protein cobW C-terminal domain CAB88_09455 SM00382 ATPases associated with a variety of cellular activities CAB88_09460 SM00382 ATPases associated with a variety of cellular activities CAB88_09495 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_09515 SM00382 ATPases associated with a variety of cellular activities CAB88_09520 SM00382 ATPases associated with a variety of cellular activities CAB88_09585 SM00287 Bacterial SH3 domain homologues CAB88_09595 SM00382 ATPases associated with a variety of cellular activities CAB88_09600 SM00448 cheY-homologous receiver domain CAB88_09600 SM00862 Transcriptional regulatory protein, C terminal CAB88_09605 SM00387 Histidine kinase-like ATPases CAB88_09605 SM00388 His Kinase A (phosphoacceptor) domain CAB88_09685 SM00448 cheY-homologous receiver domain CAB88_09685 SM00862 Transcriptional regulatory protein, C terminal CAB88_09690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_09690 SM00387 Histidine kinase-like ATPases CAB88_09690 SM00388 His Kinase A (phosphoacceptor) domain CAB88_09760 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_09785 SM00460 Transglutaminase/protease-like homologues CAB88_09810 SM00966 SpoVT / AbrB like domain CAB88_09820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_09855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_09855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_09920 SM00833 Cobalamin synthesis protein cobW C-terminal domain CAB88_09975 SM00855 Phosphoglycerate mutase family CAB88_10030 SM00155 Phospholipase D. Active site motifs. CAB88_10055 SM01091 Transporter associated domain CAB88_10145 SM00244 prohibitin homologues CAB88_10155 SM00855 Phosphoglycerate mutase family CAB88_10165 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_10180 SM01005 Alanine racemase, C-terminal domain CAB88_10210 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_10330 SM00487 DEAD-like helicases superfamily CAB88_10330 SM00490 helicase superfamily c-terminal domain CAB88_10350 SM00829 Enoylreductase CAB88_10370 SM00849 Metallo-beta-lactamase superfamily CAB88_10385 SM00460 Transglutaminase/protease-like homologues CAB88_10400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAB88_10420 SM00100 Cyclic nucleotide-monophosphate binding domain CAB88_10420 SM00419 helix_turn_helix, cAMP Regulatory protein CAB88_10425 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_10435 SM00852 Probable molybdopterin binding domain CAB88_10555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAB88_10560 SM00382 ATPases associated with a variety of cellular activities CAB88_10590 SM00567 E-Z type HEAT repeats CAB88_10590 SM00932 Scaffold protein Nfu/NifU N terminal CAB88_10610 SM00836 DALR anticodon binding domain CAB88_10610 SM01016 Arginyl tRNA synthetase N terminal dom CAB88_10620 SM00028 Tetratricopeptide repeats CAB88_10665 SM00327 von Willebrand factor (vWF) type A domain CAB88_10680 SM00382 ATPases associated with a variety of cellular activities CAB88_10690 SM00028 Tetratricopeptide repeats CAB88_10820 SM00530 Helix-turn-helix XRE-family like proteins CAB88_10835 SM00382 ATPases associated with a variety of cellular activities CAB88_10890 SM00563 Phosphate acyltransferases CAB88_10955 SM00646 CAB88_10955 CAB88_11000 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAB88_11005 SM00421 helix_turn_helix, Lux Regulon CAB88_11005 SM00448 cheY-homologous receiver domain CAB88_11020 SM00829 Enoylreductase CAB88_11040 SM00382 ATPases associated with a variety of cellular activities CAB88_11060 SM01350 CAB88_11060 CAB88_11095 SM00382 ATPases associated with a variety of cellular activities CAB88_11135 SM01091 Transporter associated domain CAB88_11150 SM00387 Histidine kinase-like ATPases CAB88_11150 SM00388 His Kinase A (phosphoacceptor) domain CAB88_11170 SM00882 Coenzyme A transferase CAB88_11175 SM00882 Coenzyme A transferase CAB88_11190 SM00382 ATPases associated with a variety of cellular activities CAB88_11230 SM00219 Tyrosine kinase, catalytic domain CAB88_11240 SM00014 Acid phosphatase homologues CAB88_11435 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_11480 SM00823 Phosphopantetheine attachment site CAB88_11480 SM00824 Thioesterase CAB88_11485 SM00923 MbtH-like protein CAB88_11505 SM00411 bacterial (prokaryotic) histone like domain CAB88_11545 SM00363 S4 RNA-binding domain CAB88_11550 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_11555 SM00382 ATPases associated with a variety of cellular activities CAB88_11590 SM00849 Metallo-beta-lactamase superfamily CAB88_11615 SM00100 Cyclic nucleotide-monophosphate binding domain CAB88_11630 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_11640 SM00849 Metallo-beta-lactamase superfamily CAB88_11660 SM01059 Chloramphenicol acetyltransferase CAB88_11685 SM00530 Helix-turn-helix XRE-family like proteins CAB88_11725 SM00357 Cold shock protein domain CAB88_11750 SM00859 Semialdehyde dehydrogenase, NAD binding domain CAB88_11790 SM00382 ATPases associated with a variety of cellular activities CAB88_11795 SM00382 ATPases associated with a variety of cellular activities CAB88_11870 SM00507 HNH nucleases CAB88_11895 SM00644 CAB88_11895 CAB88_11925 SM00530 Helix-turn-helix XRE-family like proteins CAB88_11950 SM00835 Cupin CAB88_12025 SM01207 CAB88_12025 CAB88_12040 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_12055 SM00849 Metallo-beta-lactamase superfamily CAB88_12065 SM00487 DEAD-like helicases superfamily CAB88_12065 SM00490 helicase superfamily c-terminal domain CAB88_12080 SM00382 ATPases associated with a variety of cellular activities CAB88_12135 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_12140 SM00855 Phosphoglycerate mutase family CAB88_12210 SM00421 helix_turn_helix, Lux Regulon CAB88_12215 SM00530 Helix-turn-helix XRE-family like proteins CAB88_12220 SM00966 SpoVT / AbrB like domain CAB88_12240 SM00936 Penicillin-binding protein 5, C-terminal domain CAB88_12265 SM00823 Phosphopantetheine attachment site CAB88_12270 SM00823 Phosphopantetheine attachment site CAB88_12305 SM00387 Histidine kinase-like ATPases CAB88_12310 SM00448 cheY-homologous receiver domain CAB88_12345 SM00465 GIY-YIG type nucleases (URI domain) CAB88_12370 SM00342 helix_turn_helix, arabinose operon control protein CAB88_12395 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAB88_12395 SM00091 PAS domain CAB88_12395 SM00387 Histidine kinase-like ATPases CAB88_12395 SM00388 His Kinase A (phosphoacceptor) domain CAB88_12415 SM01022 CAB88_12415 CAB88_12535 SM00382 ATPases associated with a variety of cellular activities CAB88_12565 SM00878 Biotin carboxylase C-terminal domain CAB88_12625 SM00387 Histidine kinase-like ATPases CAB88_12625 SM00388 His Kinase A (phosphoacceptor) domain CAB88_12630 SM00448 cheY-homologous receiver domain CAB88_12630 SM00862 Transcriptional regulatory protein, C terminal CAB88_12670 SM00342 helix_turn_helix, arabinose operon control protein CAB88_12700 SM00382 ATPases associated with a variety of cellular activities CAB88_12705 SM00422 helix_turn_helix, mercury resistance CAB88_12705 SM00871 Bacterial transcription activator, effector binding domain CAB88_12725 SM00382 ATPases associated with a variety of cellular activities CAB88_12755 SM00342 helix_turn_helix, arabinose operon control protein CAB88_12770 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_12850 SM00448 cheY-homologous receiver domain CAB88_12850 SM00862 Transcriptional regulatory protein, C terminal CAB88_12855 SM00387 Histidine kinase-like ATPases CAB88_12875 SM00382 ATPases associated with a variety of cellular activities CAB88_12895 SM00382 ATPases associated with a variety of cellular activities CAB88_12925 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_12930 SM01209 CAB88_12930 CAB88_12980 SM00530 Helix-turn-helix XRE-family like proteins CAB88_12985 SM00530 Helix-turn-helix XRE-family like proteins CAB88_13015 SM00382 ATPases associated with a variety of cellular activities CAB88_13130 SM00530 Helix-turn-helix XRE-family like proteins CAB88_13145 SM00507 HNH nucleases CAB88_13245 SM00644 CAB88_13245 CAB88_13345 SM00091 PAS domain CAB88_13345 SM00387 Histidine kinase-like ATPases CAB88_13345 SM00388 His Kinase A (phosphoacceptor) domain CAB88_13375 SM00382 ATPases associated with a variety of cellular activities CAB88_13390 SM00387 Histidine kinase-like ATPases CAB88_13390 SM00388 His Kinase A (phosphoacceptor) domain CAB88_13435 SM00382 ATPases associated with a variety of cellular activities CAB88_13465 SM00829 Enoylreductase CAB88_13470 SM00014 Acid phosphatase homologues CAB88_13475 SM00740 CAB88_13475 CAB88_13515 SM00530 Helix-turn-helix XRE-family like proteins CAB88_13530 SM00422 helix_turn_helix, mercury resistance CAB88_13560 SM00287 Bacterial SH3 domain homologues CAB88_13575 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_13640 SM00480 DNA polymerase III beta subunit CAB88_13760 SM00465 GIY-YIG type nucleases (URI domain) CAB88_13830 SM00448 cheY-homologous receiver domain CAB88_13830 SM00862 Transcriptional regulatory protein, C terminal CAB88_13835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_13835 SM00387 Histidine kinase-like ATPases CAB88_13835 SM00388 His Kinase A (phosphoacceptor) domain CAB88_13850 SM00344 helix_turn_helix ASNC type CAB88_13870 SM00382 ATPases associated with a variety of cellular activities CAB88_13905 SM00642 Alpha-amylase domain CAB88_13925 SM00871 Bacterial transcription activator, effector binding domain CAB88_13950 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_13955 SM00829 Enoylreductase CAB88_14080 SM00382 ATPases associated with a variety of cellular activities CAB88_14100 SM00420 helix_turn_helix, Deoxyribose operon repressor CAB88_14100 SM01134 CAB88_14100 CAB88_14140 SM00861 Transketolase, pyrimidine binding domain CAB88_14205 SM00116 Domain in cystathionine beta-synthase and other proteins. CAB88_14205 SM00382 ATPases associated with a variety of cellular activities CAB88_14240 SM00060 Fibronectin type 3 domain CAB88_14240 SM00495 Chitin-binding domain type 3 CAB88_14350 SM00341 Helicase and RNase D C-terminal CAB88_14350 SM00487 DEAD-like helicases superfamily CAB88_14350 SM00490 helicase superfamily c-terminal domain CAB88_14350 SM00956 CAB88_14350 CAB88_14380 SM00646 CAB88_14380 CAB88_14400 SM01131 CAB88_14400 CAB88_14415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAB88_14435 SM01130 CAB88_14435 CAB88_14455 SM00091 PAS domain CAB88_14455 SM00382 ATPases associated with a variety of cellular activities CAB88_14530 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CAB88_14555 SM00248 ankyrin repeats CAB88_14575 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CAB88_14585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_14585 SM00387 Histidine kinase-like ATPases CAB88_14585 SM00388 His Kinase A (phosphoacceptor) domain CAB88_14590 SM00448 cheY-homologous receiver domain CAB88_14590 SM00862 Transcriptional regulatory protein, C terminal CAB88_14790 SM00382 ATPases associated with a variety of cellular activities CAB88_14795 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_14875 SM00062 Bacterial periplasmic substrate-binding proteins CAB88_14880 SM00382 ATPases associated with a variety of cellular activities CAB88_14905 SM00028 Tetratricopeptide repeats CAB88_14970 SM00849 Metallo-beta-lactamase superfamily CAB88_15000 SM00382 ATPases associated with a variety of cellular activities CAB88_15045 SM00830 Chorismate mutase type II CAB88_15095 SM00287 Bacterial SH3 domain homologues CAB88_15170 SM01133 CAB88_15170 CAB88_15190 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_15205 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CAB88_15225 SM00346 helix_turn_helix isocitrate lyase regulation CAB88_15250 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_15280 SM00098 Alkaline phosphatase homologues CAB88_15290 SM00530 Helix-turn-helix XRE-family like proteins CAB88_15365 SM01060 CAB88_15365 CAB88_15405 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_15415 SM00889 Elongation factor G, domain IV CAB88_15430 SM00773 Proposed nucleic acid binding domain CAB88_15440 SM00382 ATPases associated with a variety of cellular activities CAB88_15460 SM00342 helix_turn_helix, arabinose operon control protein CAB88_15460 SM00871 Bacterial transcription activator, effector binding domain CAB88_15485 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_15560 SM00387 Histidine kinase-like ATPases CAB88_15560 SM00388 His Kinase A (phosphoacceptor) domain CAB88_15565 SM00448 cheY-homologous receiver domain CAB88_15565 SM00862 Transcriptional regulatory protein, C terminal CAB88_15575 SM00382 ATPases associated with a variety of cellular activities CAB88_15640 SM00797 Allophanate hydrolase subunit 2 CAB88_15645 SM00796 Allophanate hydrolase subunit 1 CAB88_15650 SM00346 helix_turn_helix isocitrate lyase regulation CAB88_15670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_15785 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_15900 SM00226 Low molecular weight phosphatase family CAB88_15915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_16005 SM00344 helix_turn_helix ASNC type CAB88_16070 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_16090 SM00448 cheY-homologous receiver domain CAB88_16090 SM00862 Transcriptional regulatory protein, C terminal CAB88_16095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_16095 SM00387 Histidine kinase-like ATPases CAB88_16095 SM00388 His Kinase A (phosphoacceptor) domain CAB88_16125 SM00421 helix_turn_helix, Lux Regulon CAB88_16125 SM00448 cheY-homologous receiver domain CAB88_16140 SM00387 Histidine kinase-like ATPases CAB88_16140 SM00388 His Kinase A (phosphoacceptor) domain CAB88_16145 SM00448 cheY-homologous receiver domain CAB88_16145 SM00862 Transcriptional regulatory protein, C terminal CAB88_16260 SM00382 ATPases associated with a variety of cellular activities CAB88_16270 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_16285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_16285 SM00387 Histidine kinase-like ATPases CAB88_16285 SM00388 His Kinase A (phosphoacceptor) domain CAB88_16290 SM00448 cheY-homologous receiver domain CAB88_16290 SM00862 Transcriptional regulatory protein, C terminal CAB88_16360 SM00342 helix_turn_helix, arabinose operon control protein CAB88_16380 SM00644 CAB88_16380 CAB88_16405 SM00854 Bacterial capsule synthesis protein PGA_cap CAB88_16430 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_16500 SM00382 ATPases associated with a variety of cellular activities CAB88_16550 SM00530 Helix-turn-helix XRE-family like proteins CAB88_16635 SM00382 ATPases associated with a variety of cellular activities CAB88_16655 SM00530 Helix-turn-helix XRE-family like proteins CAB88_16720 SM01266 CAB88_16720 CAB88_16795 SM01091 Transporter associated domain CAB88_16800 SM00422 helix_turn_helix, mercury resistance CAB88_16875 SM01350 CAB88_16875 CAB88_16880 SM00861 Transketolase, pyrimidine binding domain CAB88_16895 SM00829 Enoylreductase CAB88_16905 SM00829 Enoylreductase CAB88_16925 SM01276 CAB88_16925 CAB88_16930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_16930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_17015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_17030 SM00914 CAB88_17030 CAB88_17065 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_17065 SM00866 CAB88_17065 CAB88_17115 SM00849 Metallo-beta-lactamase superfamily CAB88_17180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_17185 SM00636 CAB88_17185 CAB88_17230 SM00871 Bacterial transcription activator, effector binding domain CAB88_17235 SM00420 helix_turn_helix, Deoxyribose operon repressor CAB88_17245 SM00382 ATPases associated with a variety of cellular activities CAB88_17270 SM00849 Metallo-beta-lactamase superfamily CAB88_17275 SM00641 Glycosyl hydrolases family 25 CAB88_17340 SM00849 Metallo-beta-lactamase superfamily CAB88_17465 SM00829 Enoylreductase CAB88_17470 SM00855 Phosphoglycerate mutase family CAB88_17480 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CAB88_17480 SM00534 ATPase domain of DNA mismatch repair MUTS family CAB88_17490 SM00642 Alpha-amylase domain CAB88_17510 SM00422 helix_turn_helix, mercury resistance CAB88_17510 SM00871 Bacterial transcription activator, effector binding domain CAB88_17570 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_17575 SM00829 Enoylreductase CAB88_17585 SM00028 Tetratricopeptide repeats CAB88_17645 SM00148 Phospholipase C, catalytic domain (part); domain X CAB88_17650 SM00060 Fibronectin type 3 domain CAB88_17690 SM00060 Fibronectin type 3 domain CAB88_17690 SM00495 Chitin-binding domain type 3 CAB88_17690 SM01276 CAB88_17690 CAB88_17705 SM00052 Putative diguanylate phosphodiesterase CAB88_17705 SM00091 PAS domain CAB88_17705 SM00267 diguanylate cyclase CAB88_17710 SM00382 ATPases associated with a variety of cellular activities CAB88_17725 SM00646 CAB88_17725 CAB88_17755 SM00387 Histidine kinase-like ATPases CAB88_17755 SM00388 His Kinase A (phosphoacceptor) domain CAB88_17760 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CAB88_17785 SM00062 Bacterial periplasmic substrate-binding proteins CAB88_17785 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CAB88_17790 SM00382 ATPases associated with a variety of cellular activities CAB88_17825 SM00479 CAB88_17825 CAB88_17830 SM00357 Cold shock protein domain CAB88_17855 SM01022 CAB88_17855 CAB88_17910 SM00822 CAB88_17910 CAB88_17965 SM00852 Probable molybdopterin binding domain CAB88_17985 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_18005 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAB88_18005 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CAB88_18110 SM00382 ATPases associated with a variety of cellular activities CAB88_18120 SM00420 helix_turn_helix, Deoxyribose operon repressor CAB88_18135 SM00434 DNA Topoisomerase IV CAB88_18140 SM00387 Histidine kinase-like ATPases CAB88_18140 SM00433 TopoisomeraseII CAB88_18150 SM00881 CoA binding domain CAB88_18155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAB88_18160 SM00448 cheY-homologous receiver domain CAB88_18160 SM00862 Transcriptional regulatory protein, C terminal CAB88_18175 SM01207 CAB88_18175 CAB88_18190 SM00257 Lysin motif CAB88_18190 SM00636 CAB88_18190 CAB88_18210 SM00479 CAB88_18210 CAB88_18225 SM00382 ATPases associated with a variety of cellular activities CAB88_18270 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_18305 SM00530 Helix-turn-helix XRE-family like proteins CAB88_18330 SM00644 CAB88_18330 CAB88_18330 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. CAB88_18335 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CAB88_18355 SM00091 PAS domain CAB88_18355 SM00387 Histidine kinase-like ATPases CAB88_18355 SM00388 His Kinase A (phosphoacceptor) domain CAB88_18385 SM01058 CarD-like/TRCF domain CAB88_18475 SM00382 ATPases associated with a variety of cellular activities CAB88_18535 SM00287 Bacterial SH3 domain homologues CAB88_18535 SM00641 Glycosyl hydrolases family 25 CAB88_18540 SM00382 ATPases associated with a variety of cellular activities CAB88_18545 SM00382 ATPases associated with a variety of cellular activities CAB88_18560 SM00861 Transketolase, pyrimidine binding domain CAB88_18575 SM00382 ATPases associated with a variety of cellular activities CAB88_18580 SM00062 Bacterial periplasmic substrate-binding proteins CAB88_18605 SM00857 Resolvase, N terminal domain CAB88_18630 SM01230 CAB88_18630 CAB88_18635 SM00422 helix_turn_helix, mercury resistance CAB88_18655 SM00382 ATPases associated with a variety of cellular activities CAB88_18690 SM00287 Bacterial SH3 domain homologues CAB88_18710 SM00420 helix_turn_helix, Deoxyribose operon repressor CAB88_18710 SM01134 CAB88_18710 CAB88_18745 SM00636 CAB88_18745 CAB88_18765 SM00411 bacterial (prokaryotic) histone like domain CAB88_18795 SM00421 helix_turn_helix, Lux Regulon CAB88_18810 SM00382 ATPases associated with a variety of cellular activities CAB88_18835 SM00342 helix_turn_helix, arabinose operon control protein CAB88_18845 SM00478 endonuclease III CAB88_18875 SM00052 Putative diguanylate phosphodiesterase CAB88_18875 SM00091 PAS domain CAB88_18875 SM00267 diguanylate cyclase CAB88_18925 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_18935 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_18935 SM00866 CAB88_18935 CAB88_18945 SM00148 Phospholipase C, catalytic domain (part); domain X CAB88_18955 SM00257 Lysin motif CAB88_18985 SM00853 MutL C terminal dimerisation domain CAB88_18985 SM01340 CAB88_18985 CAB88_18990 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CAB88_18990 SM00534 ATPase domain of DNA mismatch repair MUTS family CAB88_19005 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_19035 SM00322 K homology RNA-binding domain CAB88_19035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAB88_19045 SM00382 ATPases associated with a variety of cellular activities CAB88_19050 SM00852 Probable molybdopterin binding domain CAB88_19060 SM00530 Helix-turn-helix XRE-family like proteins CAB88_19100 SM00382 ATPases associated with a variety of cellular activities CAB88_19110 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_19110 SM00866 CAB88_19110 CAB88_19120 SM00382 ATPases associated with a variety of cellular activities CAB88_19120 SM00843 CAB88_19120 CAB88_19135 SM00849 Metallo-beta-lactamase superfamily CAB88_19140 SM01130 CAB88_19140 CAB88_19150 SM00859 Semialdehyde dehydrogenase, NAD binding domain CAB88_19285 SM00507 HNH nucleases CAB88_19395 SM00530 Helix-turn-helix XRE-family like proteins CAB88_19400 SM00530 Helix-turn-helix XRE-family like proteins CAB88_19420 SM00857 Resolvase, N terminal domain CAB88_19450 SM00316 Ribosomal protein S1-like RNA-binding domain CAB88_19450 SM00322 K homology RNA-binding domain CAB88_19455 SM01387 CAB88_19455 CAB88_19460 SM00904 Riboflavin kinase CAB88_19495 SM00316 Ribosomal protein S1-like RNA-binding domain CAB88_19495 SM00322 K homology RNA-binding domain CAB88_19505 SM00479 CAB88_19505 CAB88_19505 SM00481 DNA polymerase alpha chain like domain CAB88_19515 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAB88_19560 SM00382 ATPases associated with a variety of cellular activities CAB88_19560 SM01086 C-terminal, D2-small domain, of ClpB protein CAB88_19580 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAB88_19580 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAB88_19580 SM00493 CAB88_19580 CAB88_19590 SM00881 CoA binding domain CAB88_19640 SM00382 ATPases associated with a variety of cellular activities CAB88_19640 SM00962 SRP54-type protein, GTPase domain CAB88_19640 SM00963 SRP54-type protein, helical bundle domain CAB88_19650 SM00382 ATPases associated with a variety of cellular activities CAB88_19650 SM00962 SRP54-type protein, GTPase domain CAB88_19650 SM00963 SRP54-type protein, helical bundle domain CAB88_19655 SM00968 SMC proteins Flexible Hinge Domain CAB88_19660 SM00358 Double-stranded RNA binding motif CAB88_19660 SM00535 Ribonuclease III family CAB88_19670 SM00822 CAB88_19670 CAB88_19675 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CAB88_19690 SM00487 DEAD-like helicases superfamily CAB88_19690 SM00490 helicase superfamily c-terminal domain CAB88_19695 SM01120 CAB88_19695 CAB88_19695 SM01121 CAB88_19695 CAB88_19715 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CAB88_19730 SM00220 Serine/Threonine protein kinases, catalytic domain CAB88_19730 SM00740 CAB88_19730 CAB88_19735 SM00331 Sigma factor PP2C-like phosphatases CAB88_19735 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CAB88_19760 SM00487 DEAD-like helicases superfamily CAB88_19760 SM00490 helicase superfamily c-terminal domain CAB88_19770 SM01409 CAB88_19770 CAB88_19775 SM00072 Guanylate kinase homologues. CAB88_19790 SM00831 Cation transporter/ATPase, N-terminus CAB88_19845 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CAB88_19860 SM00851 MGS-like domain CAB88_19860 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CAB88_19860 SM01209 CAB88_19860 CAB88_19865 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CAB88_19890 SM00363 S4 RNA-binding domain CAB88_19915 SM00363 S4 RNA-binding domain CAB88_19960 SM00864 Tubulin/FtsZ family, GTPase domain CAB88_19960 SM00865 Tubulin/FtsZ family, C-terminal domain CAB88_19965 SM00842 Cell division protein FtsA CAB88_20005 SM00740 CAB88_20005 CAB88_20010 SM00740 CAB88_20010 CAB88_20040 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains CAB88_20060 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAB88_20100 SM00855 Phosphoglycerate mutase family CAB88_20135 SM00507 HNH nucleases CAB88_20180 SM00878 Biotin carboxylase C-terminal domain CAB88_20205 SM00670 Large family of predicted nucleotide-binding domains CAB88_20230 SM00838 Elongation factor G C-terminus CAB88_20310 SM00861 Transketolase, pyrimidine binding domain CAB88_20345 SM00849 Metallo-beta-lactamase superfamily CAB88_20410 SM00052 Putative diguanylate phosphodiesterase CAB88_20500 SM00387 Histidine kinase-like ATPases CAB88_20500 SM00388 His Kinase A (phosphoacceptor) domain CAB88_20535 SM00642 Alpha-amylase domain CAB88_20540 SM00642 Alpha-amylase domain CAB88_20545 SM00382 ATPases associated with a variety of cellular activities CAB88_20580 SM00382 ATPases associated with a variety of cellular activities CAB88_20665 SM01007 Class II Aldolase and Adducin N-terminal domain CAB88_20695 SM00267 diguanylate cyclase CAB88_20730 SM01061 CAT RNA binding domain CAB88_20740 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_20740 SM00866 CAB88_20740 CAB88_20755 SM00849 Metallo-beta-lactamase superfamily CAB88_20855 SM00387 Histidine kinase-like ATPases CAB88_20865 SM00936 Penicillin-binding protein 5, C-terminal domain CAB88_20875 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_20880 SM00382 ATPases associated with a variety of cellular activities CAB88_20900 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_20920 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CAB88_21015 SM00354 helix_turn _helix lactose operon repressor CAB88_21035 SM00704 CDGSH-type zinc finger. Function unknown. CAB88_21065 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_21065 SM00876 Biotin and Thiamin Synthesis associated domain CAB88_21120 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_21135 SM00860 SMI1 / KNR4 family CAB88_21185 SM00859 Semialdehyde dehydrogenase, NAD binding domain CAB88_21200 SM00849 Metallo-beta-lactamase superfamily CAB88_21225 SM00849 Metallo-beta-lactamase superfamily CAB88_21240 SM00831 Cation transporter/ATPase, N-terminus CAB88_21290 SM00382 ATPases associated with a variety of cellular activities CAB88_21300 SM00062 Bacterial periplasmic substrate-binding proteins CAB88_21300 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CAB88_21340 SM00861 Transketolase, pyrimidine binding domain CAB88_21360 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CAB88_21375 SM00091 PAS domain CAB88_21375 SM00382 ATPases associated with a variety of cellular activities CAB88_21400 SM00448 cheY-homologous receiver domain CAB88_21410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAB88_21425 SM00363 S4 RNA-binding domain CAB88_21430 SM00861 Transketolase, pyrimidine binding domain CAB88_21465 SM00878 Biotin carboxylase C-terminal domain CAB88_21515 SM00382 ATPases associated with a variety of cellular activities CAB88_21535 SM00841 Elongation factor P, C-terminal CAB88_21535 SM01185 CAB88_21535 CAB88_21570 SM00529 Helix-turn-helix diphteria tox regulatory element CAB88_21600 SM00450 Rhodanese Homology Domain CAB88_21610 SM00354 helix_turn _helix lactose operon repressor CAB88_21660 SM00382 ATPases associated with a variety of cellular activities CAB88_21665 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_21700 SM00487 DEAD-like helicases superfamily CAB88_21700 SM00490 helicase superfamily c-terminal domain CAB88_21740 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CAB88_21775 SM00382 ATPases associated with a variety of cellular activities CAB88_21840 SM01018 B12 binding domain CAB88_21865 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_21875 SM00849 Metallo-beta-lactamase superfamily CAB88_21915 SM00382 ATPases associated with a variety of cellular activities CAB88_21980 SM00382 ATPases associated with a variety of cellular activities CAB88_21995 SM00518 AP endonuclease family 2 CAB88_22000 SM00487 DEAD-like helicases superfamily CAB88_22000 SM00490 helicase superfamily c-terminal domain CAB88_22035 SM00400 zinc finger CAB88_22035 SM00493 CAB88_22035 CAB88_22035 SM00766 DNA primase DnaG DnaB-binding CAB88_22055 SM00116 Domain in cystathionine beta-synthase and other proteins. CAB88_22090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAB88_22130 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_22145 SM00271 DnaJ molecular chaperone homology domain CAB88_22165 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_22175 SM00838 Elongation factor G C-terminus CAB88_22205 SM00849 Metallo-beta-lactamase superfamily CAB88_22215 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAB88_22235 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAB88_22245 SM01103 CAB88_22245 CAB88_22300 SM00954 Region found in RelA / SpoT proteins CAB88_22310 SM00098 Alkaline phosphatase homologues CAB88_22335 SM00855 Phosphoglycerate mutase family CAB88_22380 SM00530 Helix-turn-helix XRE-family like proteins CAB88_22410 SM00382 ATPases associated with a variety of cellular activities CAB88_22510 SM00732 Likely ribonuclease with RNase H fold. CAB88_22520 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_22555 SM00028 Tetratricopeptide repeats CAB88_22575 SM00382 ATPases associated with a variety of cellular activities CAB88_22620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAB88_22620 SM00954 Region found in RelA / SpoT proteins CAB88_22665 SM01323 CAB88_22665 CAB88_22685 SM00382 ATPases associated with a variety of cellular activities CAB88_22690 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAB88_22715 SM00257 Lysin motif CAB88_22765 SM00382 ATPases associated with a variety of cellular activities CAB88_22770 SM00387 Histidine kinase-like ATPases CAB88_22775 SM00448 cheY-homologous receiver domain CAB88_22775 SM00862 Transcriptional regulatory protein, C terminal CAB88_22785 SM01317 CAB88_22785 CAB88_22880 SM00257 Lysin motif CAB88_22890 SM01004 Delta-aminolevulinic acid dehydratase CAB88_22915 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_22930 SM00382 ATPases associated with a variety of cellular activities CAB88_22930 SM00464 Found in ATP-dependent protease La (LON) CAB88_22935 SM00382 ATPases associated with a variety of cellular activities CAB88_22940 SM00382 ATPases associated with a variety of cellular activities CAB88_22940 SM00994 ClpX C4-type zinc finger CAB88_22940 SM01086 C-terminal, D2-small domain, of ClpB protein CAB88_23005 SM00530 Helix-turn-helix XRE-family like proteins CAB88_23025 SM00857 Resolvase, N terminal domain CAB88_23095 SM00909 Sporulation and spore germination CAB88_23125 SM00421 helix_turn_helix, Lux Regulon CAB88_23145 SM00530 Helix-turn-helix XRE-family like proteins CAB88_23170 SM00382 ATPases associated with a variety of cellular activities CAB88_23225 SM00465 GIY-YIG type nucleases (URI domain) CAB88_23235 SM00893 Electron transfer flavoprotein domain CAB88_23240 SM00893 Electron transfer flavoprotein domain CAB88_23315 SM00382 ATPases associated with a variety of cellular activities CAB88_23320 SM00387 Histidine kinase-like ATPases CAB88_23320 SM00388 His Kinase A (phosphoacceptor) domain CAB88_23325 SM00448 cheY-homologous receiver domain CAB88_23325 SM00862 Transcriptional regulatory protein, C terminal CAB88_23340 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CAB88_23355 SM00382 ATPases associated with a variety of cellular activities CAB88_23370 SM00725 NEAr Transporter domain CAB88_23375 SM00725 NEAr Transporter domain CAB88_23380 SM00725 NEAr Transporter domain CAB88_23390 SM00363 S4 RNA-binding domain CAB88_23400 SM00463 Small MutS-related domain CAB88_23400 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CAB88_23400 SM00534 ATPase domain of DNA mismatch repair MUTS family CAB88_23405 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAB88_23405 SM00481 DNA polymerase alpha chain like domain CAB88_23405 SM00483 DNA polymerase X family CAB88_23445 SM00873 B3/4 domain CAB88_23445 SM00874 tRNA synthetase B5 domain CAB88_23445 SM00896 Ferredoxin-fold anticodon binding domain CAB88_23455 SM00967 RNA 2'-O ribose methyltransferase substrate binding CAB88_23525 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CAB88_23540 SM00382 ATPases associated with a variety of cellular activities CAB88_23565 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAB88_23580 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CAB88_23580 SM01232 CAB88_23580 CAB88_23585 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CAB88_23585 SM00474 3'-5' exonuclease CAB88_23585 SM00475 5'-3' exonuclease CAB88_23585 SM00482 DNA polymerase A domain CAB88_23590 SM00091 PAS domain CAB88_23590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_23590 SM00387 Histidine kinase-like ATPases CAB88_23590 SM00388 His Kinase A (phosphoacceptor) domain CAB88_23595 SM00448 cheY-homologous receiver domain CAB88_23595 SM00862 Transcriptional regulatory protein, C terminal CAB88_23620 SM01329 CAB88_23620 CAB88_23670 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_23675 SM00919 Malic enzyme, NAD binding domain CAB88_23675 SM01274 CAB88_23675 CAB88_23680 SM00481 DNA polymerase alpha chain like domain CAB88_23710 SM00116 Domain in cystathionine beta-synthase and other proteins. CAB88_23720 SM00849 Metallo-beta-lactamase superfamily CAB88_23775 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CAB88_23775 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CAB88_23900 SM00981 CAB88_23900 CAB88_23945 SM00363 S4 RNA-binding domain CAB88_23945 SM01390 CAB88_23945 CAB88_23960 SM00363 S4 RNA-binding domain CAB88_23980 SM01266 CAB88_23980 CAB88_23995 SM00116 Domain in cystathionine beta-synthase and other proteins. CAB88_24015 SM00448 cheY-homologous receiver domain CAB88_24015 SM00862 Transcriptional regulatory protein, C terminal CAB88_24020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_24020 SM00387 Histidine kinase-like ATPases CAB88_24020 SM00388 His Kinase A (phosphoacceptor) domain CAB88_24025 SM00248 ankyrin repeats CAB88_24055 SM00354 helix_turn _helix lactose operon repressor CAB88_24115 SM00422 helix_turn_helix, mercury resistance CAB88_24130 SM00382 ATPases associated with a variety of cellular activities CAB88_24130 SM00843 CAB88_24130 CAB88_24135 SM00646 CAB88_24135 CAB88_24175 SM00849 Metallo-beta-lactamase superfamily CAB88_24195 SM00642 Alpha-amylase domain CAB88_24210 SM00420 helix_turn_helix, Deoxyribose operon repressor CAB88_24215 SM00363 S4 RNA-binding domain CAB88_24240 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_24270 SM01058 CarD-like/TRCF domain CAB88_24305 SM00852 Probable molybdopterin binding domain CAB88_24320 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_24340 SM00450 Rhodanese Homology Domain CAB88_24420 SM00382 ATPases associated with a variety of cellular activities CAB88_24450 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_24460 SM00382 ATPases associated with a variety of cellular activities CAB88_24505 SM00014 Acid phosphatase homologues CAB88_24520 SM00852 Probable molybdopterin binding domain CAB88_24605 SM00387 Histidine kinase-like ATPases CAB88_24610 SM00387 Histidine kinase-like ATPases CAB88_24610 SM00388 His Kinase A (phosphoacceptor) domain CAB88_24615 SM01060 CAB88_24615 CAB88_24655 SM00382 ATPases associated with a variety of cellular activities CAB88_24730 SM00422 helix_turn_helix, mercury resistance CAB88_24740 SM01234 CAB88_24740 CAB88_24745 SM00947 Carbonic anhydrase CAB88_24810 SM00899 CAB88_24810 CAB88_24820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_24820 SM00387 Histidine kinase-like ATPases CAB88_24820 SM00388 His Kinase A (phosphoacceptor) domain CAB88_24825 SM00448 cheY-homologous receiver domain CAB88_24825 SM00862 Transcriptional regulatory protein, C terminal CAB88_24855 SM00046 Diacylglycerol kinase catalytic domain (presumed) CAB88_24870 SM00382 ATPases associated with a variety of cellular activities CAB88_24905 SM00342 helix_turn_helix, arabinose operon control protein CAB88_24905 SM00871 Bacterial transcription activator, effector binding domain CAB88_24920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_24925 SM00448 cheY-homologous receiver domain CAB88_24925 SM00862 Transcriptional regulatory protein, C terminal CAB88_24930 SM00387 Histidine kinase-like ATPases CAB88_24945 SM00382 ATPases associated with a variety of cellular activities CAB88_24975 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_24975 SM00866 CAB88_24975 CAB88_25005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_25005 SM00387 Histidine kinase-like ATPases CAB88_25005 SM00388 His Kinase A (phosphoacceptor) domain CAB88_25010 SM00448 cheY-homologous receiver domain CAB88_25010 SM00862 Transcriptional regulatory protein, C terminal CAB88_25020 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CAB88_25060 SM00357 Cold shock protein domain CAB88_25075 SM00422 helix_turn_helix, mercury resistance CAB88_25110 SM00642 Alpha-amylase domain CAB88_25300 SM00316 Ribosomal protein S1-like RNA-binding domain CAB88_25310 SM00344 helix_turn_helix ASNC type CAB88_25345 SM01298 CAB88_25345 CAB88_25350 SM00479 CAB88_25350 CAB88_25465 SM00871 Bacterial transcription activator, effector binding domain CAB88_25510 SM00530 Helix-turn-helix XRE-family like proteins CAB88_25530 SM00287 Bacterial SH3 domain homologues CAB88_25530 SM00644 CAB88_25530 CAB88_25635 SM00507 HNH nucleases CAB88_25710 SM00530 Helix-turn-helix XRE-family like proteins CAB88_25725 SM00530 Helix-turn-helix XRE-family like proteins CAB88_25805 SM00382 ATPases associated with a variety of cellular activities CAB88_25950 SM00422 helix_turn_helix, mercury resistance CAB88_25965 SM00855 Phosphoglycerate mutase family CAB88_25975 SM00729 Elongator protein 3, MiaB family, Radical SAM CAB88_26020 SM00382 ATPases associated with a variety of cellular activities CAB88_26040 SM00382 ATPases associated with a variety of cellular activities CAB88_26040 SM00930 CAB88_26040 CAB88_26055 SM00493 CAB88_26055 CAB88_26130 SM00849 Metallo-beta-lactamase superfamily CAB88_26175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_26175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_26255 SM00530 Helix-turn-helix XRE-family like proteins CAB88_26275 SM00448 cheY-homologous receiver domain CAB88_26275 SM00862 Transcriptional regulatory protein, C terminal CAB88_26280 SM00387 Histidine kinase-like ATPases CAB88_26280 SM00388 His Kinase A (phosphoacceptor) domain CAB88_26305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_26305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_26310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_26310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_26330 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_26430 SM01276 CAB88_26430 CAB88_26480 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain CAB88_26485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_26550 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_26565 SM00382 ATPases associated with a variety of cellular activities CAB88_26585 SM00448 cheY-homologous receiver domain CAB88_26585 SM00862 Transcriptional regulatory protein, C terminal CAB88_26605 SM00316 Ribosomal protein S1-like RNA-binding domain CAB88_26605 SM00357 Cold shock protein domain CAB88_26605 SM00955 CAB88_26605 CAB88_26635 SM01192 CAB88_26635 CAB88_26635 SM01193 CAB88_26635 CAB88_26655 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAB88_26680 SM00387 Histidine kinase-like ATPases CAB88_26685 SM00421 helix_turn_helix, Lux Regulon CAB88_26685 SM00448 cheY-homologous receiver domain CAB88_26770 SM00028 Tetratricopeptide repeats CAB88_26810 SM00487 DEAD-like helicases superfamily CAB88_26810 SM00490 helicase superfamily c-terminal domain CAB88_26825 SM00422 helix_turn_helix, mercury resistance CAB88_26835 SM00530 Helix-turn-helix XRE-family like proteins CAB88_26850 SM00422 helix_turn_helix, mercury resistance CAB88_26870 SM00382 ATPases associated with a variety of cellular activities CAB88_26885 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAB88_26885 SM00245 tail specific protease CAB88_26895 SM00382 ATPases associated with a variety of cellular activities CAB88_26910 SM00937 CAB88_26910 CAB88_26920 SM00957 SecA DEAD-like domain CAB88_26920 SM00958 SecA preprotein cross-linking domain CAB88_26930 SM00357 Cold shock protein domain CAB88_26940 SM00487 DEAD-like helicases superfamily CAB88_26940 SM00490 helicase superfamily c-terminal domain CAB88_26980 SM00984 UDP binding domain CAB88_26995 SM00382 ATPases associated with a variety of cellular activities CAB88_27000 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. CAB88_27180 SM00287 Bacterial SH3 domain homologues CAB88_27215 SM00287 Bacterial SH3 domain homologues CAB88_27245 SM00487 DEAD-like helicases superfamily CAB88_27245 SM00490 helicase superfamily c-terminal domain CAB88_27300 SM00382 ATPases associated with a variety of cellular activities CAB88_27310 SM00530 Helix-turn-helix XRE-family like proteins CAB88_27335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_27335 SM00387 Histidine kinase-like ATPases CAB88_27335 SM00388 His Kinase A (phosphoacceptor) domain CAB88_27340 SM00448 cheY-homologous receiver domain CAB88_27340 SM00862 Transcriptional regulatory protein, C terminal CAB88_27420 SM00984 UDP binding domain CAB88_27490 SM00382 ATPases associated with a variety of cellular activities CAB88_27495 SM00850 LytTr DNA-binding domain CAB88_27575 SM00052 Putative diguanylate phosphodiesterase CAB88_27575 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAB88_27575 SM00091 PAS domain CAB88_27575 SM00267 diguanylate cyclase CAB88_27595 SM00382 ATPases associated with a variety of cellular activities CAB88_27670 SM00226 Low molecular weight phosphatase family CAB88_27690 SM00903 Flavin reductase like domain CAB88_27730 SM00937 CAB88_27730 CAB88_27750 SM00357 Cold shock protein domain CAB88_27750 SM00382 ATPases associated with a variety of cellular activities CAB88_27750 SM00959 Rho termination factor, N-terminal domain CAB88_27775 SM00448 cheY-homologous receiver domain CAB88_27825 SM00155 Phospholipase D. Active site motifs. CAB88_27835 SM00052 Putative diguanylate phosphodiesterase CAB88_27835 SM00267 diguanylate cyclase CAB88_27845 SM00530 Helix-turn-helix XRE-family like proteins CAB88_27855 SM00421 helix_turn_helix, Lux Regulon CAB88_27855 SM00448 cheY-homologous receiver domain CAB88_27870 SM00382 ATPases associated with a variety of cellular activities CAB88_27915 SM00836 DALR anticodon binding domain CAB88_27915 SM01016 Arginyl tRNA synthetase N terminal dom CAB88_27960 SM00422 helix_turn_helix, mercury resistance CAB88_27990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAB88_28000 SM00382 ATPases associated with a variety of cellular activities CAB88_28040 SM00936 Penicillin-binding protein 5, C-terminal domain CAB88_28085 SM00986 Uracil DNA glycosylase superfamily CAB88_28085 SM00987 UreE urease accessory protein, C-terminal domain CAB88_28095 SM00382 ATPases associated with a variety of cellular activities CAB88_28105 SM00354 helix_turn _helix lactose operon repressor CAB88_28140 SM00100 Cyclic nucleotide-monophosphate binding domain CAB88_28150 SM00421 helix_turn_helix, Lux Regulon CAB88_28150 SM00448 cheY-homologous receiver domain CAB88_28155 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAB88_28165 SM00267 diguanylate cyclase CAB88_28180 SM00448 cheY-homologous receiver domain CAB88_28180 SM00850 LytTr DNA-binding domain CAB88_28215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_28270 SM00382 ATPases associated with a variety of cellular activities CAB88_28305 SM00448 cheY-homologous receiver domain CAB88_28305 SM00850 LytTr DNA-binding domain CAB88_28310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAB88_28310 SM00387 Histidine kinase-like ATPases CAB88_28370 SM00487 DEAD-like helicases superfamily CAB88_28370 SM00490 helicase superfamily c-terminal domain CAB88_28375 SM01240 CAB88_28375 CAB88_28390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAB88_28390 SM00387 Histidine kinase-like ATPases CAB88_28390 SM00388 His Kinase A (phosphoacceptor) domain CAB88_28405 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAB88_28410 SM00849 Metallo-beta-lactamase superfamily CAB88_28425 SM00091 PAS domain CAB88_28425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_28425 SM00387 Histidine kinase-like ATPases CAB88_28425 SM00388 His Kinase A (phosphoacceptor) domain CAB88_28430 SM00448 cheY-homologous receiver domain CAB88_28430 SM00862 Transcriptional regulatory protein, C terminal CAB88_28455 SM00788 Adenylosuccinate synthetase CAB88_28470 SM00267 diguanylate cyclase CAB88_28515 SM00470 ParB-like nuclease domain CAB88_28525 SM00470 ParB-like nuclease domain CAB88_28535 SM01228 CAB88_28535 CAB88_28545 SM00393 Putative single-stranded nucleic acids-binding domain CAB88_28545 SM01245 CAB88_28545 CAB88_28565 SM00382 ATPases associated with a variety of cellular activities CAB88_28565 SM00760 Bacterial dnaA protein helix-turn-helix domain CAB88_28570 SM00480 DNA polymerase III beta subunit CAB88_28585 SM00387 Histidine kinase-like ATPases CAB88_28585 SM00433 TopoisomeraseII CAB88_28590 SM00434 DNA Topoisomerase IV CAB88_28625 SM00116 Domain in cystathionine beta-synthase and other proteins. CAB88_28625 SM01240 CAB88_28625 CAB88_28630 SM00936 Penicillin-binding protein 5, C-terminal domain CAB88_28690 SM00382 ATPases associated with a variety of cellular activities CAB88_28700 SM00493 CAB88_28700 CAB88_28780 SM00465 GIY-YIG type nucleases (URI domain) CAB88_28790 SM00966 SpoVT / AbrB like domain CAB88_28805 SM00493 CAB88_28805 CAB88_28810 SM00650 Ribosomal RNA adenine dimethylases CAB88_28860 SM01400 CAB88_28860 CAB88_28875 SM00487 DEAD-like helicases superfamily CAB88_28875 SM00490 helicase superfamily c-terminal domain CAB88_28875 SM00982 CAB88_28875 CAB88_28875 SM01058 CarD-like/TRCF domain CAB88_28880 SM00966 SpoVT / AbrB like domain CAB88_28895 SM00363 S4 RNA-binding domain CAB88_28915 SM00316 Ribosomal protein S1-like RNA-binding domain CAB88_28930 SM00331 Sigma factor PP2C-like phosphatases CAB88_28930 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CAB88_28935 SM00977 TilS substrate C-terminal domain CAB88_28945 SM00382 ATPases associated with a variety of cellular activities CAB88_28985 SM00905 Dihydroneopterin aldolase CAB88_28995 SM00530 Helix-turn-helix XRE-family like proteins CAB88_29120 SM00507 HNH nucleases CAB88_29175 SM00843 CAB88_29175 CAB88_29225 SM00382 ATPases associated with a variety of cellular activities CAB88_29340 SM00974 CAB88_29340 CAB88_29420 SM00894 Excalibur calcium-binding domain CAB88_29480 SM00507 HNH nucleases CAB88_29500 SM00507 HNH nucleases CAB88_29520 SM00507 HNH nucleases CAB88_29530 SM00507 HNH nucleases CAB88_29640 SM01130 CAB88_29640 CAB88_29650 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_29660 SM00347 helix_turn_helix multiple antibiotic resistance protein CAB88_29740 SM00422 helix_turn_helix, mercury resistance CAB88_29780 SM00344 helix_turn_helix ASNC type CAB88_29830 SM00966 SpoVT / AbrB like domain CAB88_29885 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_29885 SM00895 CAB88_29885 CAB88_29895 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_29910 SM00823 Phosphopantetheine attachment site CAB88_29920 SM00823 Phosphopantetheine attachment site CAB88_29970 SM00411 bacterial (prokaryotic) histone like domain CAB88_30025 SM00984 UDP binding domain CAB88_30045 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_30120 SM00382 ATPases associated with a variety of cellular activities CAB88_30150 SM01321 CAB88_30150 CAB88_30190 SM00382 ATPases associated with a variety of cellular activities CAB88_30230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_30235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_30235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_30260 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CAB88_30265 SM00357 Cold shock protein domain CAB88_30280 SM01058 CarD-like/TRCF domain CAB88_30310 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAB88_30310 SM00895 CAB88_30310 CAB88_30340 SM00116 Domain in cystathionine beta-synthase and other proteins. CAB88_30340 SM00924 MgtE intracellular N domain CAB88_30440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_30440 SM00387 Histidine kinase-like ATPases CAB88_30440 SM00388 His Kinase A (phosphoacceptor) domain CAB88_30445 SM00448 cheY-homologous receiver domain CAB88_30445 SM00862 Transcriptional regulatory protein, C terminal CAB88_30515 SM00632 CAB88_30515 CAB88_30515 SM00642 Alpha-amylase domain CAB88_30535 SM00387 Histidine kinase-like ATPases CAB88_30540 SM00448 cheY-homologous receiver domain CAB88_30540 SM00862 Transcriptional regulatory protein, C terminal CAB88_30550 SM00382 ATPases associated with a variety of cellular activities CAB88_30570 SM00450 Rhodanese Homology Domain CAB88_30570 SM00849 Metallo-beta-lactamase superfamily CAB88_30620 SM00858 CAB88_30620 CAB88_30675 SM00028 Tetratricopeptide repeats CAB88_30685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_30685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_30685 SM00319 Homologues of the ligand binding domain of Tar CAB88_30705 SM00382 ATPases associated with a variety of cellular activities CAB88_30740 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_30790 SM00758 CAB88_30790 CAB88_30815 SM00530 Helix-turn-helix XRE-family like proteins CAB88_30860 SM00448 cheY-homologous receiver domain CAB88_30865 SM00387 Histidine kinase-like ATPases CAB88_30885 SM00758 CAB88_30885 CAB88_30890 SM00028 Tetratricopeptide repeats CAB88_30895 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_30965 SM01321 CAB88_30965 CAB88_30975 SM00855 Phosphoglycerate mutase family CAB88_31060 SM00052 Putative diguanylate phosphodiesterase CAB88_31060 SM00091 PAS domain CAB88_31060 SM00267 diguanylate cyclase CAB88_31090 SM00382 ATPases associated with a variety of cellular activities CAB88_31095 SM00028 Tetratricopeptide repeats CAB88_31120 SM00382 ATPases associated with a variety of cellular activities CAB88_31125 SM00382 ATPases associated with a variety of cellular activities CAB88_31130 SM01260 CAB88_31130 CAB88_31145 SM00470 ParB-like nuclease domain CAB88_31195 SM00354 helix_turn _helix lactose operon repressor CAB88_31225 SM00382 ATPases associated with a variety of cellular activities CAB88_31235 SM00822 CAB88_31235 CAB88_31235 SM00823 Phosphopantetheine attachment site CAB88_31235 SM00825 Beta-ketoacyl synthase CAB88_31235 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CAB88_31260 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CAB88_31290 SM00822 CAB88_31290 CAB88_31290 SM00823 Phosphopantetheine attachment site CAB88_31290 SM00825 Beta-ketoacyl synthase CAB88_31290 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CAB88_31355 SM00644 CAB88_31355 CAB88_31370 SM00644 CAB88_31370 CAB88_31400 SM00530 Helix-turn-helix XRE-family like proteins CAB88_31495 SM01276 CAB88_31495 CAB88_31510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAB88_31510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAB88_31535 SM00382 ATPases associated with a variety of cellular activities CAB88_31545 SM01260 CAB88_31545 CAB88_31635 SM00507 HNH nucleases CAB88_31650 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAB88_31650 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAB88_31650 SM00493 CAB88_31650 CAB88_31670 SM00858 CAB88_31670 CAB88_31745 SM00155 Phospholipase D. Active site motifs. CAB88_31750 SM00028 Tetratricopeptide repeats CAB88_31835 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_31905 SM00530 Helix-turn-helix XRE-family like proteins CAB88_31940 SM00857 Resolvase, N terminal domain CAB88_32010 SM00411 bacterial (prokaryotic) histone like domain CAB88_32025 SM01321 CAB88_32025 CAB88_32100 SM00823 Phosphopantetheine attachment site CAB88_32105 SM00984 UDP binding domain CAB88_32125 SM00382 ATPases associated with a variety of cellular activities CAB88_32150 SM00966 SpoVT / AbrB like domain CAB88_32370 SM00530 Helix-turn-helix XRE-family like proteins CAB88_32445 SM00028 Tetratricopeptide repeats CAB88_32470 SM00287 Bacterial SH3 domain homologues CAB88_32470 SM00644 CAB88_32470 CAB88_32925 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAB88_32925 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAB88_32925 SM00493 CAB88_32925 CAB88_32940 SM00028 Tetratricopeptide repeats CAB88_33010 SM00382 ATPases associated with a variety of cellular activities CAB88_33035 SM00644 CAB88_33035 CAB88_33075 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAB88_33095 SM00421 helix_turn_helix, Lux Regulon CAB88_33115 SM00966 SpoVT / AbrB like domain CAB88_33145 SM00382 ATPases associated with a variety of cellular activities CAB88_33205 SM00507 HNH nucleases CAB88_33345 SM00060 Fibronectin type 3 domain