locus-tag class description JRY14_00020 PF01348 Type II intron maturase JRY14_00020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_00030 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_00050 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_00055 PF01580 FtsK/SpoIIIE family JRY14_00055 PF09397 Ftsk gamma domain JRY14_00055 PF17854 FtsK alpha domain JRY14_00055 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JRY14_00070 PF01609 Transposase DDE domain JRY14_00125 PF05791 Bacillus haemolytic enterotoxin (HBL) JRY14_00180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_00180 PF00672 HAMP domain JRY14_00185 PF00269 Small, acid-soluble spore proteins, alpha/beta type JRY14_00200 PF18801 response regulator aspartate phosphatase H, N terminal JRY14_00210 PF08659 KR domain JRY14_00210 PF16197 Ketoacyl-synthetase C-terminal extension JRY14_00210 PF00550 Phosphopantetheine attachment site JRY14_00210 PF14765 Polyketide synthase dehydratase JRY14_00210 PF00668 Condensation domain JRY14_00210 PF13193 AMP-binding enzyme C-terminal domain JRY14_00210 PF00501 AMP-binding enzyme JRY14_00210 PF14765 Polyketide synthase dehydratase JRY14_00210 PF08659 KR domain JRY14_00210 PF02801 Beta-ketoacyl synthase, C-terminal domain JRY14_00210 PF02801 Beta-ketoacyl synthase, C-terminal domain JRY14_00210 PF00109 Beta-ketoacyl synthase, N-terminal domain JRY14_00210 PF16197 Ketoacyl-synthetase C-terminal extension JRY14_00210 PF00668 Condensation domain JRY14_00210 PF13193 AMP-binding enzyme C-terminal domain JRY14_00210 PF00501 AMP-binding enzyme JRY14_00210 PF00550 Phosphopantetheine attachment site JRY14_00210 PF00109 Beta-ketoacyl synthase, N-terminal domain JRY14_00215 PF00668 Condensation domain JRY14_00215 PF00501 AMP-binding enzyme JRY14_00215 PF13193 AMP-binding enzyme C-terminal domain JRY14_00215 PF00550 Phosphopantetheine attachment site JRY14_00215 PF00975 Thioesterase domain JRY14_00220 PF00501 AMP-binding enzyme JRY14_00220 PF13193 AMP-binding enzyme C-terminal domain JRY14_00220 PF00668 Condensation domain JRY14_00220 PF00550 Phosphopantetheine attachment site JRY14_00230 PF02770 Acyl-CoA dehydrogenase, middle domain JRY14_00230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JRY14_00230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JRY14_00240 PF00698 Acyl transferase domain JRY14_00245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JRY14_00245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JRY14_00250 PF00550 Phosphopantetheine attachment site JRY14_00255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JRY14_00255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JRY14_00255 PF02770 Acyl-CoA dehydrogenase, middle domain JRY14_00260 PF00668 Condensation domain JRY14_00260 PF00501 AMP-binding enzyme JRY14_00260 PF13193 AMP-binding enzyme C-terminal domain JRY14_00260 PF00550 Phosphopantetheine attachment site JRY14_00260 PF00975 Thioesterase domain JRY14_00265 PF00109 Beta-ketoacyl synthase, N-terminal domain JRY14_00265 PF16197 Ketoacyl-synthetase C-terminal extension JRY14_00265 PF00668 Condensation domain JRY14_00265 PF13193 AMP-binding enzyme C-terminal domain JRY14_00265 PF00501 AMP-binding enzyme JRY14_00265 PF00550 Phosphopantetheine attachment site JRY14_00265 PF14765 Polyketide synthase dehydratase JRY14_00265 PF02801 Beta-ketoacyl synthase, C-terminal domain JRY14_00265 PF08659 KR domain JRY14_00270 PF00296 Luciferase-like monooxygenase JRY14_00275 PF00005 ABC transporter JRY14_00275 PF00664 ABC transporter transmembrane region JRY14_00285 PF00501 AMP-binding enzyme JRY14_00285 PF00550 Phosphopantetheine attachment site JRY14_00285 PF00668 Condensation domain JRY14_00285 PF13193 AMP-binding enzyme C-terminal domain JRY14_00295 PF00975 Thioesterase domain JRY14_00295 PF00501 AMP-binding enzyme JRY14_00295 PF13193 AMP-binding enzyme C-terminal domain JRY14_00295 PF00668 Condensation domain JRY14_00295 PF00550 Phosphopantetheine attachment site JRY14_00300 PF01648 4'-phosphopantetheinyl transferase superfamily JRY14_00305 PF00356 Bacterial regulatory proteins, lacI family JRY14_00320 PF05116 Sucrose-6F-phosphate phosphohydrolase JRY14_00330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JRY14_00330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JRY14_00335 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_00340 PF02423 Ornithine cyclodeaminase/mu-crystallin family JRY14_00345 PF02195 ParB-like nuclease domain JRY14_00360 PF13575 Domain of unknown function (DUF4135) JRY14_00360 PF05147 Lanthionine synthetase C-like protein JRY14_00365 PF00664 ABC transporter transmembrane region JRY14_00365 PF00005 ABC transporter JRY14_00370 PF00005 ABC transporter JRY14_00405 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_00405 PF01476 LysM domain JRY14_00405 PF01471 Putative peptidoglycan binding domain JRY14_00440 PF08378 Nuclease-related domain JRY14_00445 PF02677 Epoxyqueuosine reductase QueH JRY14_00455 PF00082 Subtilase family JRY14_00465 PF00005 ABC transporter JRY14_00475 PF04055 Radical SAM superfamily JRY14_00475 PF06463 Molybdenum Cofactor Synthesis C JRY14_00480 PF00005 ABC transporter JRY14_00480 PF00664 ABC transporter transmembrane region JRY14_00495 PF06800 Sugar transport protein JRY14_00500 PF00565 Staphylococcal nuclease homologue JRY14_00515 PF02600 Disulfide bond formation protein DsbB JRY14_00520 PF01022 Bacterial regulatory protein, arsR family JRY14_00530 PF00665 Integrase core domain JRY14_00530 PF13333 Integrase core domain JRY14_00530 PF13276 HTH-like domain JRY14_00545 PF18801 response regulator aspartate phosphatase H, N terminal JRY14_00550 PF01022 Bacterial regulatory protein, arsR family JRY14_00555 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JRY14_00555 PF18416 N-acetylglucosamine binding protein domain 2 JRY14_00575 PF07282 Putative transposase DNA-binding domain JRY14_00575 PF01385 Probable transposase JRY14_00575 PF12323 Helix-turn-helix domain JRY14_00600 PF03323 Bacillus/Clostridium GerA spore germination protein JRY14_00610 PF18416 N-acetylglucosamine binding protein domain 2 JRY14_00610 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JRY14_00615 PF00388 Phosphatidylinositol-specific phospholipase C, X domain JRY14_00625 PF01066 CDP-alcohol phosphatidyltransferase JRY14_00630 PF00665 Integrase core domain JRY14_00635 PF01695 IstB-like ATP binding protein JRY14_00650 PF00512 His Kinase A (phospho-acceptor) domain JRY14_00650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_00650 PF00672 HAMP domain JRY14_00655 PF00486 Transcriptional regulatory protein, C terminal JRY14_00655 PF00072 Response regulator receiver domain JRY14_00665 PF00005 ABC transporter JRY14_00670 PF12704 MacB-like periplasmic core domain JRY14_00670 PF02687 FtsX-like permease family JRY14_00690 PF07690 Major Facilitator Superfamily JRY14_00695 PF00128 Alpha amylase, catalytic domain JRY14_00695 PF00686 Starch binding domain JRY14_00695 PF01833 IPT/TIG domain JRY14_00715 PF00501 AMP-binding enzyme JRY14_00715 PF13193 AMP-binding enzyme C-terminal domain JRY14_00720 PF07681 DoxX JRY14_00740 PF00854 POT family JRY14_00760 PF13026 Protein of unknown function (DUF3887) JRY14_00760 PF12146 Serine aminopeptidase, S33 JRY14_00770 PF01548 Transposase JRY14_00770 PF02371 Transposase IS116/IS110/IS902 family JRY14_00810 PF05147 Lanthionine synthetase C-like protein JRY14_00810 PF13575 Domain of unknown function (DUF4135) JRY14_00815 PF00005 ABC transporter JRY14_00830 PF03412 Peptidase C39 family JRY14_00830 PF00005 ABC transporter JRY14_00830 PF00664 ABC transporter transmembrane region JRY14_00850 PF00589 Phage integrase family JRY14_00850 PF13495 Phage integrase, N-terminal SAM-like domain JRY14_00860 PF01695 IstB-like ATP binding protein JRY14_00865 PF00665 Integrase core domain JRY14_00885 PF13276 HTH-like domain JRY14_00885 PF00665 Integrase core domain JRY14_00885 PF13333 Integrase core domain JRY14_00900 PF00440 Bacterial regulatory proteins, tetR family JRY14_00910 PF00005 ABC transporter JRY14_00915 PF07786 Protein of unknown function (DUF1624) JRY14_00915 PF04235 Protein of unknown function (DUF418) JRY14_00955 PF18801 response regulator aspartate phosphatase H, N terminal JRY14_00965 PF17209 Hfq protein JRY14_00970 PF01609 Transposase DDE domain JRY14_00980 PF01609 Transposase DDE domain JRY14_00990 PF01609 Transposase DDE domain JRY14_00995 PF01609 Transposase DDE domain JRY14_01000 PF17209 Hfq protein JRY14_01010 PF00392 Bacterial regulatory proteins, gntR family JRY14_01010 PF07729 FCD domain JRY14_01015 PF13536 Putative multidrug resistance efflux transporter JRY14_01025 PF10842 Protein of unknown function (DUF2642) JRY14_01035 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JRY14_01050 PF00583 Acetyltransferase (GNAT) family JRY14_01060 PF02661 Fic/DOC family JRY14_01070 PF01037 Lrp/AsnC ligand binding domain JRY14_01075 PF13520 Amino acid permease JRY14_01095 PF04073 Aminoacyl-tRNA editing domain JRY14_01110 PF02567 Phenazine biosynthesis-like protein JRY14_01115 PF03061 Thioesterase superfamily JRY14_01120 PF00392 Bacterial regulatory proteins, gntR family JRY14_01120 PF00155 Aminotransferase class I and II JRY14_01150 PF13419 Haloacid dehalogenase-like hydrolase JRY14_01155 PF08220 DeoR-like helix-turn-helix domain JRY14_01155 PF00455 DeoR C terminal sensor domain JRY14_01160 PF12323 Helix-turn-helix domain JRY14_01160 PF07282 Putative transposase DNA-binding domain JRY14_01160 PF01385 Probable transposase JRY14_01300 PF00091 Tubulin/FtsZ family, GTPase domain JRY14_01310 PF01695 IstB-like ATP binding protein JRY14_01315 PF00665 Integrase core domain JRY14_01320 PF11638 DnaA N-terminal domain JRY14_01320 PF08299 Bacterial dnaA protein helix-turn-helix JRY14_01320 PF00308 Bacterial dnaA protein JRY14_01325 PF02767 DNA polymerase III beta subunit, central domain JRY14_01325 PF00712 DNA polymerase III beta subunit, N-terminal domain JRY14_01325 PF02768 DNA polymerase III beta subunit, C-terminal domain JRY14_01335 PF02463 RecF/RecN/SMC N terminal domain JRY14_01340 PF00204 DNA gyrase B JRY14_01340 PF01751 Toprim domain JRY14_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_01340 PF00986 DNA gyrase B subunit, carboxyl terminus JRY14_01345 PF00521 DNA gyrase/topoisomerase IV, subunit A JRY14_01345 PF03989 DNA gyrase C-terminal domain, beta-propeller JRY14_01380 PF01609 Transposase DDE domain JRY14_01385 PF01609 Transposase DDE domain JRY14_01395 PF01609 Transposase DDE domain JRY14_01400 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 JRY14_01400 PF00555 delta endotoxin JRY14_01400 PF03945 delta endotoxin, N-terminal domain JRY14_01400 PF03944 delta endotoxin JRY14_01420 PF01609 Transposase DDE domain JRY14_01430 PF01609 Transposase DDE domain JRY14_01440 PF01609 Transposase DDE domain JRY14_01445 PF01609 Transposase DDE domain JRY14_01450 PF01609 Transposase DDE domain JRY14_01460 PF00571 CBS domain JRY14_01460 PF00478 IMP dehydrogenase / GMP reductase domain JRY14_01465 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_01465 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_01470 PF01680 SOR/SNZ family JRY14_01475 PF01174 SNO glutamine amidotransferase family JRY14_01480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JRY14_01480 PF02403 Seryl-tRNA synthetase N-terminal domain JRY14_01495 PF01712 Deoxynucleoside kinase JRY14_01500 PF01712 Deoxynucleoside kinase JRY14_01505 PF00857 Isochorismatase family JRY14_01510 PF14437 MafB19-like deaminase JRY14_01520 PF12169 DNA polymerase III subunits gamma and tau domain III JRY14_01525 PF02575 YbaB/EbfC DNA-binding family JRY14_01530 PF02132 RecR protein JRY14_01530 PF13662 Toprim domain JRY14_01535 PF10704 Protein of unknown function (DUF2508) JRY14_01540 PF07441 SigmaK-factor processing regulatory protein BofA JRY14_01575 PF01276 Orn/Lys/Arg decarboxylase, major domain JRY14_01575 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JRY14_01580 PF02223 Thymidylate kinase JRY14_01585 PF09115 DNA polymerase III, delta subunit, C terminal JRY14_01590 PF04468 PSP1 C-terminal conserved region JRY14_01595 PF06156 Initiation control protein YabA JRY14_01600 PF05175 Methyltransferase small domain JRY14_01615 PF01541 GIY-YIG catalytic domain JRY14_01620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JRY14_01625 PF18277 AbrB C-terminal domain JRY14_01625 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JRY14_01630 PF08264 Anticodon-binding domain of tRNA JRY14_01630 PF09334 tRNA synthetases class I (M) JRY14_01630 PF01588 Putative tRNA binding domain JRY14_01635 PF01026 TatD related DNase JRY14_01640 PF13331 Domain of unknown function (DUF4093) JRY14_01640 PF13662 Toprim domain JRY14_01645 PF00398 Ribosomal RNA adenine dimethylase JRY14_01650 PF05582 YabG peptidase U57 JRY14_01655 PF06257 Biofilm formation stimulator VEG JRY14_01660 PF00269 Small, acid-soluble spore proteins, alpha/beta type JRY14_01665 PF08544 GHMP kinases C terminal JRY14_01665 PF00288 GHMP kinases N terminal domain JRY14_01670 PF00156 Phosphoribosyl transferase domain JRY14_01670 PF09182 Bacterial purine repressor, N-terminal JRY14_01675 PF01042 Endoribonuclease L-PSP JRY14_01680 PF04026 SpoVG JRY14_01685 PF00483 Nucleotidyl transferase JRY14_01685 PF00132 Bacterial transferase hexapeptide (six repeats) JRY14_01690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JRY14_01690 PF14572 Phosphoribosyl synthetase-associated domain JRY14_01695 PF01195 Peptidyl-tRNA hydrolase JRY14_01705 PF02559 CarD-like/TRCF domain JRY14_01705 PF03461 TRCF domain JRY14_01705 PF17757 UvrB interaction domain JRY14_01705 PF00271 Helicase conserved C-terminal domain JRY14_01705 PF00270 DEAD/DEAH box helicase JRY14_01710 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JRY14_01710 PF15714 Stage V sporulation protein T C-terminal, transcription factor JRY14_01715 PF14667 Polysaccharide biosynthesis C-terminal domain JRY14_01715 PF01943 Polysaccharide biosynthesis protein JRY14_01720 PF03819 MazG nucleotide pyrophosphohydrolase domain JRY14_01720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JRY14_01725 PF01479 S4 domain JRY14_01730 PF07873 YabP family JRY14_01735 PF09578 Spore cortex protein YabQ (Spore_YabQ) JRY14_01745 PF00575 S1 RNA binding domain JRY14_01760 PF07228 Stage II sporulation protein E (SpoIIE) JRY14_01765 PF11734 TilS substrate C-terminal domain JRY14_01765 PF09179 TilS substrate binding domain JRY14_01765 PF01171 PP-loop family JRY14_01770 PF00156 Phosphoribosyl transferase domain JRY14_01775 PF17862 AAA+ lid domain JRY14_01775 PF06480 FtsH Extracellular JRY14_01775 PF01434 Peptidase family M41 JRY14_01775 PF00004 ATPase family associated with various cellular activities (AAA) JRY14_01780 PF03309 Type III pantothenate kinase JRY14_01785 PF01430 Hsp33 protein JRY14_01790 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_01795 PF04715 Anthranilate synthase component I, N terminal region JRY14_01795 PF00425 chorismate binding enzyme JRY14_01800 PF00117 Glutamine amidotransferase class-I JRY14_01805 PF01063 Amino-transferase class IV JRY14_01810 PF00809 Pterin binding enzyme JRY14_01815 PF02152 Dihydroneopterin aldolase JRY14_01820 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JRY14_01825 PF01381 Helix-turn-helix JRY14_01830 PF01207 Dihydrouridine synthase (Dus) JRY14_01835 PF00152 tRNA synthetases class II (D, K and N) JRY14_01835 PF01336 OB-fold nucleic acid binding domain JRY14_01915 PF17727 CtsR C-terminal dimerization domain JRY14_01915 PF05848 CtsR N-terminal HTH domain JRY14_01920 PF02151 UvrB/uvrC motif JRY14_01925 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JRY14_01930 PF02861 Clp amino terminal domain, pathogenicity island component JRY14_01930 PF10431 C-terminal, D2-small domain, of ClpB protein JRY14_01930 PF07724 AAA domain (Cdc48 subfamily) JRY14_01930 PF00004 ATPase family associated with various cellular activities (AAA) JRY14_01930 PF17871 AAA lid domain JRY14_01935 PF18073 Rubredoxin metal binding domain JRY14_01940 PF10635 DisA bacterial checkpoint controller linker region JRY14_01940 PF02457 DisA bacterial checkpoint controller nucleotide-binding JRY14_01950 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JRY14_01955 PF02542 YgbB family JRY14_01960 PF00749 tRNA synthetases class I (E and Q), catalytic domain JRY14_01965 PF06426 Serine acetyltransferase, N-terminal JRY14_01965 PF00132 Bacterial transferase hexapeptide (six repeats) JRY14_01970 PF09190 DALR domain JRY14_01970 PF01406 tRNA synthetases class I (C) catalytic domain JRY14_01975 PF00636 Ribonuclease III domain JRY14_01980 PF00588 SpoU rRNA Methylase family JRY14_01980 PF08032 RNA 2'-O ribose methyltransferase substrate binding JRY14_01985 PF05991 YacP-like NYN domain JRY14_01990 PF08281 Sigma-70, region 4 JRY14_01990 PF04542 Sigma-70 region 2 JRY14_01995 PF00471 Ribosomal protein L33 JRY14_02000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JRY14_02005 PF00467 KOW motif JRY14_02005 PF02357 Transcription termination factor nusG JRY14_02010 PF00298 Ribosomal protein L11, RNA binding domain JRY14_02010 PF03946 Ribosomal protein L11, N-terminal domain JRY14_02015 PF00687 Ribosomal protein L1p/L10e family JRY14_02020 PF00466 Ribosomal protein L10 JRY14_02025 PF16320 Ribosomal protein L7/L12 dimerisation domain JRY14_02025 PF00542 Ribosomal protein L7/L12 C-terminal domain JRY14_02030 PF05175 Methyltransferase small domain JRY14_02035 PF04563 RNA polymerase beta subunit JRY14_02035 PF00562 RNA polymerase Rpb2, domain 6 JRY14_02035 PF10385 RNA polymerase beta subunit external 1 domain JRY14_02035 PF04561 RNA polymerase Rpb2, domain 2 JRY14_02035 PF04565 RNA polymerase Rpb2, domain 3 JRY14_02035 PF04560 RNA polymerase Rpb2, domain 7 JRY14_02040 PF00623 RNA polymerase Rpb1, domain 2 JRY14_02040 PF04983 RNA polymerase Rpb1, domain 3 JRY14_02040 PF04997 RNA polymerase Rpb1, domain 1 JRY14_02040 PF04998 RNA polymerase Rpb1, domain 5 JRY14_02040 PF05000 RNA polymerase Rpb1, domain 4 JRY14_02045 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JRY14_02050 PF00164 Ribosomal protein S12/S23 JRY14_02055 PF00177 Ribosomal protein S7p/S5e JRY14_02060 PF14492 Elongation Factor G, domain II JRY14_02060 PF03764 Elongation factor G, domain IV JRY14_02060 PF03144 Elongation factor Tu domain 2 JRY14_02060 PF00679 Elongation factor G C-terminus JRY14_02060 PF00009 Elongation factor Tu GTP binding domain JRY14_02065 PF03144 Elongation factor Tu domain 2 JRY14_02065 PF03143 Elongation factor Tu C-terminal domain JRY14_02065 PF00009 Elongation factor Tu GTP binding domain JRY14_02070 PF00338 Ribosomal protein S10p/S20e JRY14_02075 PF00297 Ribosomal protein L3 JRY14_02080 PF00573 Ribosomal protein L4/L1 family JRY14_02085 PF00276 Ribosomal protein L23 JRY14_02090 PF00181 Ribosomal Proteins L2, RNA binding domain JRY14_02090 PF03947 Ribosomal Proteins L2, C-terminal domain JRY14_02095 PF00203 Ribosomal protein S19 JRY14_02100 PF00237 Ribosomal protein L22p/L17e JRY14_02105 PF00189 Ribosomal protein S3, C-terminal domain JRY14_02105 PF07650 KH domain JRY14_02110 PF00252 Ribosomal protein L16p/L10e JRY14_02115 PF00831 Ribosomal L29 protein JRY14_02120 PF00366 Ribosomal protein S17 JRY14_02125 PF00238 Ribosomal protein L14p/L23e JRY14_02130 PF00467 KOW motif JRY14_02130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JRY14_02135 PF00281 Ribosomal protein L5 JRY14_02135 PF00673 ribosomal L5P family C-terminus JRY14_02140 PF00253 Ribosomal protein S14p/S29e JRY14_02145 PF00410 Ribosomal protein S8 JRY14_02150 PF00347 Ribosomal protein L6 JRY14_02155 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JRY14_02160 PF00333 Ribosomal protein S5, N-terminal domain JRY14_02160 PF03719 Ribosomal protein S5, C-terminal domain JRY14_02165 PF00327 Ribosomal protein L30p/L7e JRY14_02170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JRY14_02175 PF00344 SecY translocase JRY14_02180 PF05191 Adenylate kinase, active site lid JRY14_02185 PF00557 Metallopeptidase family M24 JRY14_02190 PF01176 Translation initiation factor 1A / IF-1 JRY14_02195 PF00444 Ribosomal protein L36 JRY14_02200 PF00416 Ribosomal protein S13/S18 JRY14_02205 PF00411 Ribosomal protein S11 JRY14_02210 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JRY14_02210 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JRY14_02210 PF01000 RNA polymerase Rpb3/RpoA insert domain JRY14_02215 PF01196 Ribosomal protein L17 JRY14_02220 PF00005 ABC transporter JRY14_02225 PF00005 ABC transporter JRY14_02230 PF02361 Cobalt transport protein JRY14_02235 PF01416 tRNA pseudouridine synthase JRY14_02240 PF00572 Ribosomal protein L13 JRY14_02245 PF00380 Ribosomal protein S9/S16 JRY14_02255 PF01520 N-acetylmuramoyl-L-alanine amidase JRY14_02260 PF10609 NUBPL iron-transfer P-loop NTPase JRY14_02265 PF17898 Spore germination GerD central core domain JRY14_02270 PF14089 KinB-signalling pathway activation in sporulation JRY14_02275 PF01522 Polysaccharide deacetylase JRY14_02335 PF02595 Glycerate kinase family JRY14_02340 PF00491 Arginase family JRY14_02345 PF02457 DisA bacterial checkpoint controller nucleotide-binding JRY14_02350 PF07949 YbbR-like protein JRY14_02355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JRY14_02355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JRY14_02355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JRY14_02355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JRY14_02365 PF01380 SIS domain JRY14_02375 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JRY14_02375 PF00326 Prolyl oligopeptidase family JRY14_02395 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_02400 PF09383 NIL domain JRY14_02400 PF00005 ABC transporter JRY14_02405 PF03180 NLPA lipoprotein JRY14_02410 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_02410 PF00107 Zinc-binding dehydrogenase JRY14_02420 PF01565 FAD binding domain JRY14_02425 PF07690 Major Facilitator Superfamily JRY14_02435 PF07690 Major Facilitator Superfamily JRY14_02450 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_02460 PF00005 ABC transporter JRY14_02460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JRY14_02465 PF00005 ABC transporter JRY14_02465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JRY14_02475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_02485 PF12833 Helix-turn-helix domain JRY14_02500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_02505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_02510 PF00248 Aldo/keto reductase family JRY14_02515 PF03807 NADP oxidoreductase coenzyme F420-dependent JRY14_02515 PF14748 Pyrroline-5-carboxylate reductase dimerisation JRY14_02520 PF06800 Sugar transport protein JRY14_02525 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_02535 PF01609 Transposase DDE domain JRY14_02540 PF12727 PBP superfamily domain JRY14_02540 PF12728 Helix-turn-helix domain JRY14_02550 PF03466 LysR substrate binding domain JRY14_02550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_02555 PF00892 EamA-like transporter family JRY14_02560 PF14142 YrzO-like protein JRY14_02570 PF01553 Acyltransferase JRY14_02580 PF00356 Bacterial regulatory proteins, lacI family JRY14_02580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JRY14_02590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_02590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_02605 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) JRY14_02630 PF12848 ABC transporter JRY14_02630 PF00005 ABC transporter JRY14_02630 PF16326 ABC transporter C-terminal domain JRY14_02640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_02650 PF01609 Transposase DDE domain JRY14_02670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JRY14_02670 PF00005 ABC transporter JRY14_02675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JRY14_02675 PF00005 ABC transporter JRY14_02710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_02715 PF01557 Fumarylacetoacetate (FAA) hydrolase family JRY14_02725 PF13520 Amino acid permease JRY14_02730 PF07690 Major Facilitator Superfamily JRY14_02735 PF01820 D-ala D-ala ligase N-terminus JRY14_02735 PF07478 D-ala D-ala ligase C-terminus JRY14_02740 PF02875 Mur ligase family, glutamate ligase domain JRY14_02740 PF01225 Mur ligase family, catalytic domain JRY14_02740 PF08245 Mur ligase middle domain JRY14_02745 PF00271 Helicase conserved C-terminal domain JRY14_02745 PF00270 DEAD/DEAH box helicase JRY14_02750 PF03851 UV-endonuclease UvdE JRY14_02755 PF01694 Rhomboid family JRY14_02760 PF01648 4'-phosphopantetheinyl transferase superfamily JRY14_02770 PF00842 Alanine racemase, C-terminal domain JRY14_02770 PF01168 Alanine racemase, N-terminal domain JRY14_02775 PF01402 Ribbon-helix-helix protein, copG family JRY14_02780 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JRY14_02785 PF17674 HHH domain JRY14_02785 PF00575 S1 RNA binding domain JRY14_02785 PF09371 Tex-like protein N-terminal domain JRY14_02785 PF16921 Tex protein YqgF-like domain JRY14_02795 PF10263 SprT-like family JRY14_02795 PF17283 SprT-like zinc ribbon domain JRY14_02895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JRY14_02900 PF00814 Glycoprotease family JRY14_02905 PF00583 Acetyltransferase (GNAT) family JRY14_02910 PF00814 Glycoprotease family JRY14_02915 PF16326 ABC transporter C-terminal domain JRY14_02915 PF00005 ABC transporter JRY14_02915 PF12848 ABC transporter JRY14_02920 PF02629 CoA binding domain JRY14_02920 PF06971 Putative DNA-binding protein N-terminus JRY14_02930 PF02517 CPBP intramembrane metalloprotease JRY14_02935 PF00166 Chaperonin 10 Kd subunit JRY14_02940 PF00118 TCP-1/cpn60 chaperonin family JRY14_02945 PF00117 Glutamine amidotransferase class-I JRY14_02945 PF00958 GMP synthase C terminal domain JRY14_02945 PF02540 NAD synthase JRY14_02950 PF00860 Permease family JRY14_02955 PF00072 Response regulator receiver domain JRY14_02955 PF00486 Transcriptional regulatory protein, C terminal JRY14_02960 PF16736 Single Cache-like JRY14_02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_02960 PF00512 His Kinase A (phospho-acceptor) domain JRY14_02960 PF00989 PAS fold JRY14_02985 PF01323 DSBA-like thioredoxin domain JRY14_03010 PF02673 Bacitracin resistance protein BacA JRY14_03020 PF00005 ABC transporter JRY14_03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_03025 PF00512 His Kinase A (phospho-acceptor) domain JRY14_03030 PF00072 Response regulator receiver domain JRY14_03030 PF00486 Transcriptional regulatory protein, C terminal JRY14_03050 PF05045 Rhamnan synthesis protein F JRY14_03050 PF14307 Glycosyltransferase WbsX JRY14_03060 PF08241 Methyltransferase domain JRY14_03075 PF01609 Transposase DDE domain JRY14_03090 PF00665 Integrase core domain JRY14_03095 PF01695 IstB-like ATP binding protein JRY14_03110 PF00535 Glycosyl transferase family 2 JRY14_03130 PF00892 EamA-like transporter family JRY14_03155 PF00731 AIR carboxylase JRY14_03160 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JRY14_03160 PF02222 ATP-grasp domain JRY14_03165 PF00206 Lyase JRY14_03165 PF10397 Adenylosuccinate lyase C-terminus JRY14_03170 PF01259 SAICAR synthetase JRY14_03175 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JRY14_03185 PF00586 AIR synthase related protein, N-terminal domain JRY14_03185 PF02769 AIR synthase related protein, C-terminal domain JRY14_03185 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JRY14_03190 PF00156 Phosphoribosyl transferase domain JRY14_03195 PF00586 AIR synthase related protein, N-terminal domain JRY14_03195 PF02769 AIR synthase related protein, C-terminal domain JRY14_03200 PF00551 Formyl transferase JRY14_03205 PF01808 AICARFT/IMPCHase bienzyme JRY14_03205 PF02142 MGS-like domain JRY14_03210 PF02843 Phosphoribosylglycinamide synthetase, C domain JRY14_03210 PF02844 Phosphoribosylglycinamide synthetase, N domain JRY14_03210 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JRY14_03230 PF01884 PcrB family JRY14_03235 PF00580 UvrD/REP helicase N-terminal domain JRY14_03235 PF13361 UvrD-like helicase C-terminal domain JRY14_03240 PF00533 BRCA1 C Terminus (BRCT) domain JRY14_03240 PF01653 NAD-dependent DNA ligase adenylation domain JRY14_03240 PF03120 NAD-dependent DNA ligase OB-fold domain JRY14_03240 PF12826 Helix-hairpin-helix motif JRY14_03240 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JRY14_03245 PF07537 CamS sex pheromone cAM373 precursor JRY14_03250 PF01925 Sulfite exporter TauE/SafE JRY14_03255 PF00171 Aldehyde dehydrogenase family JRY14_03260 PF00857 Isochorismatase family JRY14_03265 PF00005 ABC transporter JRY14_03265 PF09383 NIL domain JRY14_03270 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_03275 PF03180 NLPA lipoprotein JRY14_03290 PF02374 Anion-transporting ATPase JRY14_03290 PF17886 HSP20-like domain found in ArsA JRY14_03295 PF01047 MarR family JRY14_03300 PF05360 yiaA/B two helix domain JRY14_03305 PF02686 Glu-tRNAGln amidotransferase C subunit JRY14_03310 PF01425 Amidase JRY14_03315 PF02637 GatB domain JRY14_03315 PF02934 GatB/GatE catalytic domain JRY14_03320 PF00781 Diacylglycerol kinase catalytic domain JRY14_03325 PF13419 Haloacid dehalogenase-like hydrolase JRY14_03330 PF00202 Aminotransferase class-III JRY14_03335 PF00158 Sigma-54 interaction domain JRY14_03340 PF00171 Aldehyde dehydrogenase family JRY14_03345 PF00893 Small Multidrug Resistance protein JRY14_03380 PF07670 Nucleoside recognition JRY14_03380 PF07662 Na+ dependent nucleoside transporter C-terminus JRY14_03380 PF01773 Na+ dependent nucleoside transporter N-terminus JRY14_03385 PF13847 Methyltransferase domain JRY14_03385 PF01938 TRAM domain JRY14_03385 PF05958 tRNA (Uracil-5-)-methyltransferase JRY14_03390 PF14659 Phage integrase, N-terminal SAM-like domain JRY14_03390 PF00589 Phage integrase family JRY14_03405 PF01381 Helix-turn-helix JRY14_03550 PF00589 Phage integrase family JRY14_03660 PF01548 Transposase JRY14_03660 PF02371 Transposase IS116/IS110/IS902 family JRY14_03665 PF04688 SPP1 phage holin JRY14_03670 PF01476 LysM domain JRY14_03670 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_03670 PF01471 Putative peptidoglycan binding domain JRY14_03675 PF01207 Dihydrouridine synthase (Dus) JRY14_03680 PF07308 Protein of unknown function (DUF1456) JRY14_03695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JRY14_03695 PF13378 Enolase C-terminal domain-like JRY14_03705 PF03553 Na+/H+ antiporter family JRY14_03710 PF07687 Peptidase dimerisation domain JRY14_03710 PF01546 Peptidase family M20/M25/M40 JRY14_03720 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_03720 PF13192 Thioredoxin domain JRY14_03725 PF00578 AhpC/TSA family JRY14_03730 PF01636 Phosphotransferase enzyme family JRY14_03735 PF01008 Initiation factor 2 subunit family JRY14_03740 PF00596 Class II Aldolase and Adducin N-terminal domain JRY14_03745 PF01032 FecCD transport family JRY14_03750 PF01032 FecCD transport family JRY14_03755 PF01497 Periplasmic binding protein JRY14_03760 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_03770 PF12728 Helix-turn-helix domain JRY14_03795 PF13426 PAS domain JRY14_03795 PF13188 PAS domain JRY14_03795 PF00512 His Kinase A (phospho-acceptor) domain JRY14_03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_03795 PF00989 PAS fold JRY14_03815 PF10127 RNA repair pathway DNA polymerase beta family JRY14_03820 PF07690 Major Facilitator Superfamily JRY14_03830 PF01609 Transposase DDE domain JRY14_03845 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_03850 PF00497 Bacterial extracellular solute-binding proteins, family 3 JRY14_03855 PF00005 ABC transporter JRY14_03860 PF12729 Four helix bundle sensory module for signal transduction JRY14_03860 PF00672 HAMP domain JRY14_03860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_03870 PF02863 Arginine repressor, C-terminal domain JRY14_03870 PF01316 Arginine repressor, DNA binding domain JRY14_03880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JRY14_03880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JRY14_03885 PF13520 Amino acid permease JRY14_03890 PF00696 Amino acid kinase family JRY14_03895 PF00027 Cyclic nucleotide-binding domain JRY14_03895 PF13545 Crp-like helix-turn-helix domain JRY14_03910 PF01565 FAD binding domain JRY14_03910 PF08031 Berberine and berberine like JRY14_03915 PF00128 Alpha amylase, catalytic domain JRY14_03915 PF16657 Maltogenic Amylase, C-terminal domain JRY14_03920 PF00367 phosphotransferase system, EIIB JRY14_03920 PF02378 Phosphotransferase system, EIIC JRY14_03920 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JRY14_03925 PF03372 Endonuclease/Exonuclease/phosphatase family JRY14_03930 PF01061 ABC-2 type transporter JRY14_03935 PF01131 DNA topoisomerase JRY14_03935 PF01751 Toprim domain JRY14_03940 PF02110 Hydroxyethylthiazole kinase family JRY14_03945 PF02581 Thiamine monophosphate synthase JRY14_03950 PF03605 Anaerobic c4-dicarboxylate membrane transporter JRY14_03955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_03955 PF00672 HAMP domain JRY14_03960 PF00501 AMP-binding enzyme JRY14_03960 PF13193 AMP-binding enzyme C-terminal domain JRY14_03960 PF00668 Condensation domain JRY14_03960 PF00550 Phosphopantetheine attachment site JRY14_03960 PF00975 Thioesterase domain JRY14_03965 PF01910 Thiamine-binding protein JRY14_03970 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_03980 PF00005 ABC transporter JRY14_03990 PF00704 Glycosyl hydrolases family 18 JRY14_03990 PF00041 Fibronectin type III domain JRY14_04015 PF00440 Bacterial regulatory proteins, tetR family JRY14_04015 PF08360 QacR-like protein, C-terminal region JRY14_04030 PF11700 Vacuole effluxer Atg22 like JRY14_04045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JRY14_04045 PF03129 Anticodon binding domain JRY14_04045 PF09180 Prolyl-tRNA synthetase, C-terminal JRY14_04055 PF00480 ROK family JRY14_04060 PF02342 TerD domain JRY14_04065 PF02342 TerD domain JRY14_04070 PF02342 TerD domain JRY14_04075 PF03741 Integral membrane protein TerC family JRY14_04080 PF14266 Putative component of 'biosynthetic module' JRY14_04085 PF05816 Toxic anion resistance protein (TelA) JRY14_04090 PF00689 Cation transporting ATPase, C-terminus JRY14_04090 PF00690 Cation transporter/ATPase, N-terminus JRY14_04095 PF13276 HTH-like domain JRY14_04095 PF00665 Integrase core domain JRY14_04095 PF13333 Integrase core domain JRY14_04105 PF06569 Protein of unknown function (DUF1128) JRY14_04110 PF01451 Low molecular weight phosphotyrosine protein phosphatase JRY14_04120 PF03631 Virulence factor BrkB JRY14_04130 PF00892 EamA-like transporter family JRY14_04140 PF10502 Signal peptidase, peptidase S26 JRY14_04150 PF09335 SNARE associated Golgi protein JRY14_04160 PF01609 Transposase DDE domain JRY14_04170 PF13333 Integrase core domain JRY14_04170 PF00665 Integrase core domain JRY14_04170 PF13276 HTH-like domain JRY14_04180 PF16242 Pyridoxamine 5'-phosphate oxidase like JRY14_04185 PF01699 Sodium/calcium exchanger protein JRY14_04190 PF14167 YfkD-like protein JRY14_04195 PF04055 Radical SAM superfamily JRY14_04195 PF08756 YfkB-like domain JRY14_04205 PF05681 Fumarate hydratase (Fumerase) JRY14_04205 PF05683 Fumarase C-terminus JRY14_04210 PF01522 Polysaccharide deacetylase JRY14_04215 PF00730 HhH-GPD superfamily base excision DNA repair protein JRY14_04220 PF01938 TRAM domain JRY14_04220 PF05958 tRNA (Uracil-5-)-methyltransferase JRY14_04225 PF01416 tRNA pseudouridine synthase JRY14_04235 PF00158 Sigma-54 interaction domain JRY14_04235 PF02954 Bacterial regulatory protein, Fis family JRY14_04235 PF13426 PAS domain JRY14_04260 PF01609 Transposase DDE domain JRY14_04275 PF07687 Peptidase dimerisation domain JRY14_04275 PF01546 Peptidase family M20/M25/M40 JRY14_04300 PF04960 Glutaminase JRY14_04305 PF00367 phosphotransferase system, EIIB JRY14_04305 PF02378 Phosphotransferase system, EIIC JRY14_04310 PF00144 Beta-lactamase JRY14_04325 PF00535 Glycosyl transferase family 2 JRY14_04330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JRY14_04330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JRY14_04330 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JRY14_04335 PF01370 NAD dependent epimerase/dehydratase family JRY14_04335 PF02911 Formyl transferase, C-terminal domain JRY14_04335 PF00551 Formyl transferase JRY14_04340 PF00535 Glycosyl transferase family 2 JRY14_04350 PF01228 Glycine radical JRY14_04350 PF02901 Pyruvate formate lyase-like JRY14_04355 PF04055 Radical SAM superfamily JRY14_04360 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JRY14_04360 PF04101 Glycosyltransferase family 28 C-terminal domain JRY14_04375 PF01979 Amidohydrolase family JRY14_04380 PF08338 Domain of unknown function (DUF1731) JRY14_04380 PF01370 NAD dependent epimerase/dehydratase family JRY14_04385 PF02631 RecX family JRY14_04400 PF08176 Small acid-soluble spore protein K family JRY14_04405 PF14043 WVELL protein JRY14_04410 PF04307 LexA-binding, inner membrane-associated putative hydrolase JRY14_04415 PF00730 HhH-GPD superfamily base excision DNA repair protein JRY14_04415 PF14815 NUDIX domain JRY14_04425 PF04259 Small, acid-soluble spore protein, gamma-type JRY14_04430 PF14182 YgaB-like protein JRY14_04435 PF04167 Protein of unknown function (DUF402) JRY14_04440 PF00005 ABC transporter JRY14_04440 PF00664 ABC transporter transmembrane region JRY14_04445 PF06081 Aromatic acid exporter family member 1 JRY14_04450 PF00310 Glutamine amidotransferases class-II JRY14_04450 PF04898 Glutamate synthase central domain JRY14_04450 PF01645 Conserved region in glutamate synthase JRY14_04450 PF01493 GXGXG motif JRY14_04455 PF00202 Aminotransferase class-III JRY14_04460 PF00005 ABC transporter JRY14_04475 PF07885 Ion channel JRY14_04480 PF00578 AhpC/TSA family JRY14_04485 PF01475 Ferric uptake regulator family JRY14_04495 PF11023 Zinc-ribbon containing domain JRY14_04595 PF01709 Transcriptional regulator JRY14_04600 PF13344 Haloacid dehalogenase-like hydrolase JRY14_04600 PF00293 NUDIX domain JRY14_04605 PF00905 Penicillin binding protein transpeptidase domain JRY14_04605 PF00912 Transglycosylase JRY14_04610 PF13462 Thioredoxin JRY14_04620 PF08331 Domain of unknown function (DUF1730) JRY14_04625 PF12671 Putative amidase domain JRY14_04630 PF00588 SpoU rRNA Methylase family JRY14_04635 PF00563 EAL domain JRY14_04635 PF00990 Diguanylate cyclase, GGDEF domain JRY14_04635 PF03707 Bacterial signalling protein N terminal repeat JRY14_04640 PF08298 PrkA AAA domain JRY14_04640 PF06798 PrkA serine protein kinase C-terminal domain JRY14_04645 PF04285 Protein of unknown function (DUF444) JRY14_04660 PF02028 BCCT, betaine/carnitine/choline family transporter JRY14_04665 PF01752 Collagenase JRY14_04665 PF08453 Peptidase family M9 N-terminal JRY14_04665 PF18496 Collagenase G catalytic helper subdomain JRY14_04675 PF01145 SPFH domain / Band 7 family JRY14_04675 PF15975 Flotillin JRY14_04680 PF00672 HAMP domain JRY14_04680 PF02743 Cache domain JRY14_04680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_04685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JRY14_04685 PF17203 Single cache domain 3 JRY14_04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_04685 PF00989 PAS fold JRY14_04690 PF12431 Transcriptional regulator JRY14_04690 PF00072 Response regulator receiver domain JRY14_04695 PF03600 Citrate transporter JRY14_04715 PF02371 Transposase IS116/IS110/IS902 family JRY14_04715 PF01548 Transposase JRY14_04725 PF04309 Glycerol-3-phosphate responsive antiterminator JRY14_04730 PF17912 MalK OB fold domain JRY14_04730 PF00005 ABC transporter JRY14_04735 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_04740 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_04745 PF13416 Bacterial extracellular solute-binding protein JRY14_04755 PF13276 HTH-like domain JRY14_04755 PF00665 Integrase core domain JRY14_04755 PF13333 Integrase core domain JRY14_04760 PF00149 Calcineurin-like phosphoesterase JRY14_04765 PF00072 Response regulator receiver domain JRY14_04765 PF00486 Transcriptional regulatory protein, C terminal JRY14_04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_04770 PF00512 His Kinase A (phospho-acceptor) domain JRY14_04770 PF00672 HAMP domain JRY14_04780 PF13529 Peptidase_C39 like family JRY14_04785 PF00672 HAMP domain JRY14_04785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_04785 PF02743 Cache domain JRY14_04790 PF17203 Single cache domain 3 JRY14_04790 PF00989 PAS fold JRY14_04790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_04790 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JRY14_04795 PF00072 Response regulator receiver domain JRY14_04800 PF03390 2-hydroxycarboxylate transporter family JRY14_04805 PF00390 Malic enzyme, N-terminal domain JRY14_04805 PF03949 Malic enzyme, NAD binding domain JRY14_04815 PF00892 EamA-like transporter family JRY14_04820 PF00392 Bacterial regulatory proteins, gntR family JRY14_04820 PF00155 Aminotransferase class I and II JRY14_04830 PF00672 HAMP domain JRY14_04830 PF00989 PAS fold JRY14_04830 PF00512 His Kinase A (phospho-acceptor) domain JRY14_04830 PF18698 Histidine kinase sensor domain JRY14_04830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_04835 PF00486 Transcriptional regulatory protein, C terminal JRY14_04835 PF00072 Response regulator receiver domain JRY14_04840 PF13508 Acetyltransferase (GNAT) domain JRY14_04840 PF00583 Acetyltransferase (GNAT) family JRY14_04845 PF02634 FdhD/NarQ family JRY14_04855 PF01568 Molydopterin dinucleotide binding domain JRY14_04855 PF00384 Molybdopterin oxidoreductase JRY14_04855 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JRY14_04855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JRY14_04855 PF00037 4Fe-4S binding domain JRY14_04860 PF07849 Protein of unknown function (DUF1641) JRY14_04870 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JRY14_04870 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JRY14_04875 PF13520 Amino acid permease JRY14_04885 PF01022 Bacterial regulatory protein, arsR family JRY14_04890 PF00403 Heavy-metal-associated domain JRY14_04895 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JRY14_04895 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JRY14_04895 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JRY14_04905 PF02371 Transposase IS116/IS110/IS902 family JRY14_04905 PF01548 Transposase JRY14_04915 PF01447 Thermolysin metallopeptidase, catalytic domain JRY14_04915 PF02868 Thermolysin metallopeptidase, alpha-helical domain JRY14_04915 PF07504 Fungalysin/Thermolysin Propeptide Motif JRY14_04915 PF03413 Peptidase propeptide and YPEB domain JRY14_04935 PF04294 VanW like protein JRY14_04940 PF03816 Cell envelope-related transcriptional attenuator domain JRY14_04945 PF01773 Na+ dependent nucleoside transporter N-terminus JRY14_04945 PF07662 Na+ dependent nucleoside transporter C-terminus JRY14_04950 PF01609 Transposase DDE domain JRY14_04955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_04960 PF01548 Transposase JRY14_04960 PF02371 Transposase IS116/IS110/IS902 family JRY14_04965 PF00571 CBS domain JRY14_04965 PF03471 Transporter associated domain JRY14_04965 PF01595 Cyclin M transmembrane N-terminal domain JRY14_04970 PF00206 Lyase JRY14_04970 PF10415 Fumarase C C-terminus JRY14_04975 PF02652 L-lactate permease JRY14_04980 PF01022 Bacterial regulatory protein, arsR family JRY14_04985 PF08141 Small acid-soluble spore protein H family JRY14_04990 PF00854 POT family JRY14_04995 PF01497 Periplasmic binding protein JRY14_05000 PF01032 FecCD transport family JRY14_05005 PF01032 FecCD transport family JRY14_05010 PF00005 ABC transporter JRY14_05015 PF08241 Methyltransferase domain JRY14_05025 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_05035 PF01370 NAD dependent epimerase/dehydratase family JRY14_05040 PF00156 Phosphoribosyl transferase domain JRY14_05045 PF00293 NUDIX domain JRY14_05045 PF13344 Haloacid dehalogenase-like hydrolase JRY14_05050 PF00092 von Willebrand factor type A domain JRY14_05055 PF07728 AAA domain (dynein-related subfamily) JRY14_05060 PF13091 PLD-like domain JRY14_05060 PF13396 Phospholipase_D-nuclease N-terminal JRY14_05070 PF03707 Bacterial signalling protein N terminal repeat JRY14_05070 PF00990 Diguanylate cyclase, GGDEF domain JRY14_05070 PF00563 EAL domain JRY14_05075 PF13520 Amino acid permease JRY14_05080 PF07702 UTRA domain JRY14_05080 PF00392 Bacterial regulatory proteins, gntR family JRY14_05085 PF00367 phosphotransferase system, EIIB JRY14_05085 PF02378 Phosphotransferase system, EIIC JRY14_05090 PF00128 Alpha amylase, catalytic domain JRY14_05090 PF16657 Maltogenic Amylase, C-terminal domain JRY14_05105 PF03323 Bacillus/Clostridium GerA spore germination protein JRY14_05110 PF01636 Phosphotransferase enzyme family JRY14_05115 PF01235 Sodium:alanine symporter family JRY14_05120 PF00005 ABC transporter JRY14_05125 PF00497 Bacterial extracellular solute-binding proteins, family 3 JRY14_05130 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_05135 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_05140 PF00324 Amino acid permease JRY14_05165 PF13280 WYL domain JRY14_05165 PF08279 HTH domain JRY14_05170 PF01872 RibD C-terminal domain JRY14_05175 PF00672 HAMP domain JRY14_05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_05175 PF18698 Histidine kinase sensor domain JRY14_05175 PF00512 His Kinase A (phospho-acceptor) domain JRY14_05175 PF00989 PAS fold JRY14_05180 PF00072 Response regulator receiver domain JRY14_05180 PF00486 Transcriptional regulatory protein, C terminal JRY14_05190 PF01740 STAS domain JRY14_05190 PF00916 Sulfate permease family JRY14_05195 PF00582 Universal stress protein family JRY14_05205 PF07690 Major Facilitator Superfamily JRY14_05210 PF01047 MarR family JRY14_05215 PF07690 Major Facilitator Superfamily JRY14_05220 PF00356 Bacterial regulatory proteins, lacI family JRY14_05225 PF00294 pfkB family carbohydrate kinase JRY14_05230 PF05025 RbsD / FucU transport protein family JRY14_05235 PF00005 ABC transporter JRY14_05240 PF02653 Branched-chain amino acid transport system / permease component JRY14_05245 PF13407 Periplasmic binding protein domain JRY14_05250 PF00923 Transaldolase/Fructose-6-phosphate aldolase JRY14_05255 PF05547 Immune inhibitor A peptidase M6 JRY14_05270 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_05270 PF00107 Zinc-binding dehydrogenase JRY14_05285 PF01609 Transposase DDE domain JRY14_05295 PF01609 Transposase DDE domain JRY14_05300 PF03372 Endonuclease/Exonuclease/phosphatase family JRY14_05330 PF02673 Bacitracin resistance protein BacA JRY14_05335 PF00672 HAMP domain JRY14_05335 PF02743 Cache domain JRY14_05335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_05340 PF06725 3D domain JRY14_05340 PF07501 G5 domain JRY14_05340 PF03990 G5-linked-Ubiquitin-like domain JRY14_05345 PF01381 Helix-turn-helix JRY14_05355 PF04203 Sortase domain JRY14_05365 PF00854 POT family JRY14_05370 PF05525 Branched-chain amino acid transport protein JRY14_05385 PF00324 Amino acid permease JRY14_05390 PF00860 Permease family JRY14_05405 PF13673 Acetyltransferase (GNAT) domain JRY14_05415 PF02254 TrkA-N domain JRY14_05415 PF00999 Sodium/hydrogen exchanger family JRY14_05415 PF02080 TrkA-C domain JRY14_05425 PF00510 Cytochrome c oxidase subunit III JRY14_05430 PF00115 Cytochrome C and Quinol oxidase polypeptide I JRY14_05435 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JRY14_05440 PF00324 Amino acid permease JRY14_05445 PF13529 Peptidase_C39 like family JRY14_05450 PF07687 Peptidase dimerisation domain JRY14_05450 PF01546 Peptidase family M20/M25/M40 JRY14_05455 PF11755 Protein of unknown function (DUF3311) JRY14_05460 PF00474 Sodium:solute symporter family JRY14_05465 PF03323 Bacillus/Clostridium GerA spore germination protein JRY14_05470 PF03845 Spore germination protein JRY14_05475 PF05504 Spore germination B3/ GerAC like, C-terminal JRY14_05485 PF02421 Ferrous iron transport protein B JRY14_05485 PF07670 Nucleoside recognition JRY14_05485 PF17910 FeoB cytosolic helical domain JRY14_05485 PF07664 Ferrous iron transport protein B C terminus JRY14_05490 PF07670 Nucleoside recognition JRY14_05490 PF02421 Ferrous iron transport protein B JRY14_05490 PF17910 FeoB cytosolic helical domain JRY14_05490 PF07664 Ferrous iron transport protein B C terminus JRY14_05495 PF02421 Ferrous iron transport protein B JRY14_05495 PF17910 FeoB cytosolic helical domain JRY14_05495 PF04023 FeoA domain JRY14_05495 PF07664 Ferrous iron transport protein B C terminus JRY14_05495 PF07670 Nucleoside recognition JRY14_05500 PF12849 PBP superfamily domain JRY14_05505 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_05510 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_05520 PF00873 AcrB/AcrD/AcrF family JRY14_05640 PF00571 CBS domain JRY14_05660 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_05660 PF01348 Type II intron maturase JRY14_05670 PF03070 TENA/THI-4/PQQC family JRY14_05675 PF00005 ABC transporter JRY14_05680 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_05685 PF09084 NMT1/THI5 like JRY14_05690 PF02581 Thiamine monophosphate synthase JRY14_05695 PF01266 FAD dependent oxidoreductase JRY14_05700 PF02597 ThiS family JRY14_05705 PF05690 Thiazole biosynthesis protein ThiG JRY14_05710 PF00899 ThiF family JRY14_05715 PF08543 Phosphomethylpyrimidine kinase JRY14_05740 PF03814 Potassium-transporting ATPase A subunit JRY14_05750 PF02669 K+-transporting ATPase, c chain JRY14_05755 PF02702 Osmosensitive K+ channel His kinase sensor domain JRY14_05760 PF07690 Major Facilitator Superfamily JRY14_05765 PF01047 MarR family JRY14_05775 PF00860 Permease family JRY14_05785 PF03734 L,D-transpeptidase catalytic domain JRY14_05785 PF17969 L,D-transpeptidase C-terminal domain JRY14_05795 PF00294 pfkB family carbohydrate kinase JRY14_05800 PF00251 Glycosyl hydrolases family 32 N-terminal domain JRY14_05800 PF08244 Glycosyl hydrolases family 32 C terminal JRY14_05805 PF00367 phosphotransferase system, EIIB JRY14_05805 PF02378 Phosphotransferase system, EIIC JRY14_05810 PF13407 Periplasmic binding protein domain JRY14_05810 PF00356 Bacterial regulatory proteins, lacI family JRY14_05820 PF00085 Thioredoxin JRY14_05825 PF02600 Disulfide bond formation protein DsbB JRY14_05830 PF14148 YhdB-like protein JRY14_05840 PF03845 Spore germination protein JRY14_05850 PF03323 Bacillus/Clostridium GerA spore germination protein JRY14_05865 PF00881 Nitroreductase family JRY14_05870 PF04293 SpoVR like protein JRY14_05895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_05895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JRY14_05900 PF02583 Metal-sensitive transcriptional repressor JRY14_05905 PF00581 Rhodanese-like domain JRY14_05905 PF01206 Sulfurtransferase TusA JRY14_05910 PF00753 Metallo-beta-lactamase superfamily JRY14_05910 PF00581 Rhodanese-like domain JRY14_05915 PF01206 Sulfurtransferase TusA JRY14_05920 PF01206 Sulfurtransferase TusA JRY14_05920 PF00581 Rhodanese-like domain JRY14_05925 PF00581 Rhodanese-like domain JRY14_05930 PF13686 DsrE/DsrF/DrsH-like family JRY14_05935 PF01925 Sulfite exporter TauE/SafE JRY14_05945 PF03816 Cell envelope-related transcriptional attenuator domain JRY14_05950 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_05950 PF00107 Zinc-binding dehydrogenase JRY14_05955 PF02690 Na+/Pi-cotransporter JRY14_05960 PF07690 Major Facilitator Superfamily JRY14_05970 PF00874 PRD domain JRY14_05970 PF05043 Mga helix-turn-helix domain JRY14_05970 PF08279 HTH domain JRY14_05970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JRY14_05975 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JRY14_05980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JRY14_05985 PF02378 Phosphotransferase system, EIIC JRY14_06000 PF06725 3D domain JRY14_06000 PF01476 LysM domain JRY14_06005 PF02687 FtsX-like permease family JRY14_06005 PF12704 MacB-like periplasmic core domain JRY14_06010 PF00005 ABC transporter JRY14_06020 PF09529 Integral membrane protein (intg_mem_TP0381) JRY14_06035 PF05525 Branched-chain amino acid transport protein JRY14_06040 PF05067 Manganese containing catalase JRY14_06045 PF12652 CotJB protein JRY14_06050 PF11007 Spore coat associated protein JA (CotJA) JRY14_06065 PF02735 Ku70/Ku80 beta-barrel domain JRY14_06075 PF09335 SNARE associated Golgi protein JRY14_06110 PF13520 Amino acid permease JRY14_06115 PF00999 Sodium/hydrogen exchanger family JRY14_06125 PF01418 Helix-turn-helix domain, rpiR family JRY14_06125 PF01380 SIS domain JRY14_06130 PF13580 SIS domain JRY14_06135 PF00367 phosphotransferase system, EIIB JRY14_06135 PF02378 Phosphotransferase system, EIIC JRY14_06145 PF07681 DoxX JRY14_06160 PF00892 EamA-like transporter family JRY14_06165 PF01037 Lrp/AsnC ligand binding domain JRY14_06170 PF00206 Lyase JRY14_06170 PF14698 Argininosuccinate lyase C-terminal JRY14_06170 PF00583 Acetyltransferase (GNAT) family JRY14_06180 PF13411 MerR HTH family regulatory protein JRY14_06185 PF00893 Small Multidrug Resistance protein JRY14_06195 PF17934 Tetracyclin repressor-like, C-terminal domain JRY14_06195 PF00440 Bacterial regulatory proteins, tetR family JRY14_06200 PF07690 Major Facilitator Superfamily JRY14_06205 PF01638 HxlR-like helix-turn-helix JRY14_06215 PF02525 Flavodoxin-like fold JRY14_06220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_06220 PF12793 Sugar transport-related sRNA regulator N-term JRY14_06225 PF07690 Major Facilitator Superfamily JRY14_06240 PF01965 DJ-1/PfpI family JRY14_06245 PF00199 Catalase JRY14_06245 PF06628 Catalase-related immune-responsive JRY14_06245 PF18011 C-terminal domain found in long catalases JRY14_06255 PF13520 Amino acid permease JRY14_06260 PF01177 Asp/Glu/Hydantoin racemase JRY14_06270 PF00171 Aldehyde dehydrogenase family JRY14_06275 PF00005 ABC transporter JRY14_06275 PF00664 ABC transporter transmembrane region JRY14_06280 PF00664 ABC transporter transmembrane region JRY14_06280 PF00005 ABC transporter JRY14_06290 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_06295 PF00005 ABC transporter JRY14_06300 PF00269 Small, acid-soluble spore proteins, alpha/beta type JRY14_06310 PF14398 YheC/D like ATP-grasp JRY14_06320 PF04286 Protein of unknown function (DUF445) JRY14_06325 PF06133 Control of competence regulator ComK, YlbF/YmcA JRY14_06350 PF03306 Alpha-acetolactate decarboxylase JRY14_06355 PF02245 Methylpurine-DNA glycosylase (MPG) JRY14_06370 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_06370 PF01471 Putative peptidoglycan binding domain JRY14_06375 PF04055 Radical SAM superfamily JRY14_06380 PF13193 AMP-binding enzyme C-terminal domain JRY14_06380 PF00501 AMP-binding enzyme JRY14_06395 PF01740 STAS domain JRY14_06395 PF00916 Sulfate permease family JRY14_06400 PF14667 Polysaccharide biosynthesis C-terminal domain JRY14_06400 PF01943 Polysaccharide biosynthesis protein JRY14_06425 PF00378 Enoyl-CoA hydratase/isomerase JRY14_06445 PF05343 M42 glutamyl aminopeptidase JRY14_06450 PF00395 S-layer homology domain JRY14_06450 PF01520 N-acetylmuramoyl-L-alanine amidase JRY14_06460 PF11121 Protein of unknown function (DUF2639) JRY14_06465 PF05544 Proline racemase JRY14_06470 PF02423 Ornithine cyclodeaminase/mu-crystallin family JRY14_06475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_06480 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_06485 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_06485 PF12911 N-terminal TM domain of oligopeptide transport permease C JRY14_06490 PF00005 ABC transporter JRY14_06490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JRY14_06495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JRY14_06495 PF00005 ABC transporter JRY14_06505 PF00753 Metallo-beta-lactamase superfamily JRY14_06505 PF16123 Hydroxyacylglutathione hydrolase C-terminus JRY14_06525 PF18801 response regulator aspartate phosphatase H, N terminal JRY14_06545 PF01609 Transposase DDE domain JRY14_06555 PF01609 Transposase DDE domain JRY14_06560 PF01609 Transposase DDE domain JRY14_06575 PF02423 Ornithine cyclodeaminase/mu-crystallin family JRY14_06595 PF14436 Bacterial EndoU nuclease JRY14_06595 PF04740 LXG domain of WXG superfamily JRY14_06645 PF00083 Sugar (and other) transporter JRY14_06650 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JRY14_06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_06655 PF00072 Response regulator receiver domain JRY14_06655 PF12431 Transcriptional regulator JRY14_06655 PF08279 HTH domain JRY14_06660 PF03401 Tripartite tricarboxylate transporter family receptor JRY14_06730 PF13411 MerR HTH family regulatory protein JRY14_06730 PF06445 GyrI-like small molecule binding domain JRY14_06750 PF03796 DnaB-like helicase C terminal domain JRY14_06750 PF00772 DnaB-like helicase N terminal domain JRY14_06755 PF01494 FAD binding domain JRY14_06765 PF01925 Sulfite exporter TauE/SafE JRY14_06775 PF02371 Transposase IS116/IS110/IS902 family JRY14_06775 PF01548 Transposase JRY14_06790 PF07690 Major Facilitator Superfamily JRY14_06805 PF09680 Family of unknown function JRY14_06830 PF13026 Protein of unknown function (DUF3887) JRY14_06830 PF12146 Serine aminopeptidase, S33 JRY14_06875 PF01066 CDP-alcohol phosphatidyltransferase JRY14_06890 PF02733 Dak1 domain JRY14_06900 PF02733 Dak1 domain JRY14_06935 PF06725 3D domain JRY14_06935 PF01476 LysM domain JRY14_06945 PF00395 S-layer homology domain JRY14_06965 PF12697 Alpha/beta hydrolase family JRY14_06985 PF11181 Heat induced stress protein YflT JRY14_07005 PF01740 STAS domain JRY14_07010 PF13581 Histidine kinase-like ATPase domain JRY14_07015 PF04539 Sigma-70 region 3 JRY14_07015 PF04545 Sigma-70, region 4 JRY14_07015 PF04542 Sigma-70 region 2 JRY14_07025 PF13426 PAS domain JRY14_07025 PF07228 Stage II sporulation protein E (SpoIIE) JRY14_07030 PF01739 CheR methyltransferase, SAM binding domain JRY14_07030 PF03705 CheR methyltransferase, all-alpha domain JRY14_07035 PF00672 HAMP domain JRY14_07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_07035 PF00512 His Kinase A (phospho-acceptor) domain JRY14_07035 PF01627 Hpt domain JRY14_07035 PF00072 Response regulator receiver domain JRY14_07035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JRY14_07055 PF01906 Putative heavy-metal-binding JRY14_07070 PF00107 Zinc-binding dehydrogenase JRY14_07070 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_07075 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JRY14_07080 PF11121 Protein of unknown function (DUF2639) JRY14_07095 PF00149 Calcineurin-like phosphoesterase JRY14_07100 PF13514 AAA domain JRY14_07110 PF01966 HD domain JRY14_07110 PF01336 OB-fold nucleic acid binding domain JRY14_07115 PF02899 Phage integrase, N-terminal SAM-like domain JRY14_07115 PF00589 Phage integrase family JRY14_07145 PF10549 ORF11CD3 domain JRY14_07145 PF09669 Phage regulatory protein Rha (Phage_pRha) JRY14_07235 PF01555 DNA methylase JRY14_07250 PF03838 Recombination protein U JRY14_07260 PF08281 Sigma-70, region 4 JRY14_07320 PF02371 Transposase IS116/IS110/IS902 family JRY14_07320 PF01548 Transposase JRY14_07390 PF05105 Bacteriophage holin family JRY14_07395 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_07395 PF01471 Putative peptidoglycan binding domain JRY14_07395 PF01476 LysM domain JRY14_07420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_07425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_07430 PF18801 response regulator aspartate phosphatase H, N terminal JRY14_07430 PF17874 MalT-like TPR region JRY14_07440 PF00561 alpha/beta hydrolase fold JRY14_07440 PF08386 TAP-like protein JRY14_07445 PF14147 Sporulation protein YhaL JRY14_07470 PF00190 Cupin JRY14_07480 PF04309 Glycerol-3-phosphate responsive antiterminator JRY14_07485 PF01609 Transposase DDE domain JRY14_07490 PF00230 Major intrinsic protein JRY14_07495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JRY14_07495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JRY14_07500 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JRY14_07500 PF01266 FAD dependent oxidoreductase JRY14_07505 PF03551 Transcriptional regulator PadR-like family JRY14_07515 PF04542 Sigma-70 region 2 JRY14_07515 PF08281 Sigma-70, region 4 JRY14_07530 PF13538 UvrD-like helicase C-terminal domain JRY14_07555 PF01047 MarR family JRY14_07560 PF12732 YtxH-like protein JRY14_07565 PF01230 HIT domain JRY14_07570 PF00005 ABC transporter JRY14_07575 PF05975 Bacterial ABC transporter protein EcsB JRY14_07580 PF12787 EcsC protein family JRY14_07600 PF03703 Bacterial PH domain JRY14_07605 PF03703 Bacterial PH domain JRY14_07635 PF10014 2OG-Fe dioxygenase JRY14_07645 PF00892 EamA-like transporter family JRY14_07650 PF03703 Bacterial PH domain JRY14_07655 PF03703 Bacterial PH domain JRY14_07660 PF03992 Antibiotic biosynthesis monooxygenase JRY14_07665 PF00912 Transglycosylase JRY14_07665 PF00905 Penicillin binding protein transpeptidase domain JRY14_07670 PF01208 Uroporphyrinogen decarboxylase (URO-D) JRY14_07675 PF00762 Ferrochelatase JRY14_07680 PF01593 Flavin containing amine oxidoreductase JRY14_07705 PF03965 Penicillinase repressor JRY14_07715 PF17932 Tetracyclin repressor-like, C-terminal domain JRY14_07715 PF00440 Bacterial regulatory proteins, tetR family JRY14_07755 PF13280 WYL domain JRY14_07760 PF00356 Bacterial regulatory proteins, lacI family JRY14_07765 PF14149 YhfH-like protein JRY14_07770 PF12706 Beta-lactamase superfamily domain JRY14_07775 PF03099 Biotin/lipoate A/B protein ligase family JRY14_07775 PF10437 Bacterial lipoate protein ligase C-terminus JRY14_07785 PF00501 AMP-binding enzyme JRY14_07785 PF13193 AMP-binding enzyme C-terminal domain JRY14_07790 PF01520 N-acetylmuramoyl-L-alanine amidase JRY14_07790 PF00395 S-layer homology domain JRY14_07800 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_07805 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_07810 PF00005 ABC transporter JRY14_07810 PF17850 CysA C-terminal regulatory domain JRY14_07810 PF12857 TOBE-like domain JRY14_07815 PF05593 RHS Repeat JRY14_07830 PF05593 RHS Repeat JRY14_07840 PF07968 Leukocidin/Hemolysin toxin family JRY14_07850 PF00149 Calcineurin-like phosphoesterase JRY14_07855 PF01966 HD domain JRY14_07865 PF04542 Sigma-70 region 2 JRY14_07865 PF08281 Sigma-70, region 4 JRY14_07870 PF12833 Helix-turn-helix domain JRY14_07870 PF06445 GyrI-like small molecule binding domain JRY14_07875 PF01548 Transposase JRY14_07875 PF02371 Transposase IS116/IS110/IS902 family JRY14_07885 PF00512 His Kinase A (phospho-acceptor) domain JRY14_07885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_07890 PF00072 Response regulator receiver domain JRY14_07890 PF00486 Transcriptional regulatory protein, C terminal JRY14_07910 PF01548 Transposase JRY14_07910 PF02371 Transposase IS116/IS110/IS902 family JRY14_07915 PF01435 Peptidase family M48 JRY14_07915 PF16491 CAAX prenyl protease N-terminal, five membrane helices JRY14_07920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_07920 PF02743 Cache domain JRY14_07920 PF00672 HAMP domain JRY14_07925 PF06452 Carbohydrate family 9 binding domain-like JRY14_07925 PF02018 Carbohydrate binding domain JRY14_07925 PF00331 Glycosyl hydrolase family 10 JRY14_07925 PF00395 S-layer homology domain JRY14_07935 PF01274 Malate synthase JRY14_07945 PF00463 Isocitrate lyase family JRY14_07960 PF00313 'Cold-shock' DNA-binding domain JRY14_07985 PF09335 SNARE associated Golgi protein JRY14_07990 PF10502 Signal peptidase, peptidase S26 JRY14_07995 PF12705 PD-(D/E)XK nuclease superfamily JRY14_07995 PF13361 UvrD-like helicase C-terminal domain JRY14_08000 PF13361 UvrD-like helicase C-terminal domain JRY14_08000 PF00580 UvrD/REP helicase N-terminal domain JRY14_08000 PF12705 PD-(D/E)XK nuclease superfamily JRY14_08010 PF10676 Spore germination protein gerPA/gerPF JRY14_08015 PF10970 Spore germination protein GerPE JRY14_08025 PF10737 Spore germination protein GerPC JRY14_08030 PF10803 Spore germination GerPB JRY14_08035 PF10676 Spore germination protein gerPA/gerPF JRY14_08040 PF09388 Spo0E like sporulation regulatory protein JRY14_08045 PF01557 Fumarylacetoacetate (FAA) hydrolase family JRY14_08055 PF00202 Aminotransferase class-III JRY14_08060 PF07457 Protein of unknown function (DUF1516) JRY14_08070 PF00733 Asparagine synthase JRY14_08070 PF13537 Glutamine amidotransferase domain JRY14_08075 PF00239 Resolvase, N terminal domain JRY14_08075 PF02796 Helix-turn-helix domain of resolvase JRY14_08085 PF01726 LexA DNA binding domain JRY14_08085 PF00717 Peptidase S24-like JRY14_08320 PF13333 Integrase core domain JRY14_08320 PF00665 Integrase core domain JRY14_08320 PF13276 HTH-like domain JRY14_08330 PF00154 recA bacterial DNA recombination protein JRY14_08335 PF07261 Replication initiation and membrane attachment JRY14_08345 PF00762 Ferrochelatase JRY14_08350 PF00199 Catalase JRY14_08350 PF06628 Catalase-related immune-responsive JRY14_08355 PF00909 Ammonium Transporter Family JRY14_08360 PF00128 Alpha amylase, catalytic domain JRY14_08370 PF04461 Protein of unknown function (DUF520) JRY14_08375 PF13509 S1 domain JRY14_08375 PF17783 CvfB-like winged helix domain JRY14_08390 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_08390 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_08400 PF12758 Protein of unknown function (DUF3813) JRY14_08415 PF14168 YjzC-like protein JRY14_08420 PF00004 ATPase family associated with various cellular activities (AAA) JRY14_08420 PF07724 AAA domain (Cdc48 subfamily) JRY14_08420 PF17871 AAA lid domain JRY14_08420 PF02861 Clp amino terminal domain, pathogenicity island component JRY14_08420 PF10431 C-terminal, D2-small domain, of ClpB protein JRY14_08440 PF10815 ComZ JRY14_08445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JRY14_08445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JRY14_08450 PF02801 Beta-ketoacyl synthase, C-terminal domain JRY14_08450 PF00109 Beta-ketoacyl synthase, N-terminal domain JRY14_08455 PF10026 Predicted Zn-dependent protease (DUF2268) JRY14_08460 PF12227 Protein of unknown function (DUF3603) JRY14_08470 PF00579 tRNA synthetases class I (W and Y) JRY14_08485 PF01609 Transposase DDE domain JRY14_08495 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_08500 PF12911 N-terminal TM domain of oligopeptide transport permease C JRY14_08500 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_08505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JRY14_08505 PF00005 ABC transporter JRY14_08510 PF00005 ABC transporter JRY14_08510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JRY14_08515 PF01554 MatE JRY14_08520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_08530 PF03960 ArsC family JRY14_08535 PF03741 Integral membrane protein TerC family JRY14_08540 PF05389 Negative regulator of genetic competence (MecA) JRY14_08545 PF13396 Phospholipase_D-nuclease N-terminal JRY14_08545 PF13091 PLD-like domain JRY14_08555 PF01432 Peptidase family M3 JRY14_08555 PF08439 Oligopeptidase F JRY14_08570 PF01152 Bacterial-like globin JRY14_08575 PF01928 CYTH domain JRY14_08585 PF04607 Region found in RelA / SpoT proteins JRY14_08590 PF01513 ATP-NAD kinase JRY14_08595 PF00849 RNA pseudouridylate synthase JRY14_08605 PF00149 Calcineurin-like phosphoesterase JRY14_08610 PF01098 Cell cycle protein JRY14_08615 PF00535 Glycosyl transferase family 2 JRY14_08620 PF08241 Methyltransferase domain JRY14_08625 PF05711 Macrocin-O-methyltransferase (TylF) JRY14_08635 PF13181 Tetratricopeptide repeat JRY14_08635 PF00535 Glycosyl transferase family 2 JRY14_08655 PF00483 Nucleotidyl transferase JRY14_08660 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JRY14_08665 PF16363 GDP-mannose 4,6 dehydratase JRY14_08670 PF04321 RmlD substrate binding domain JRY14_08690 PF07098 Protein of unknown function (DUF1360) JRY14_08710 PF00580 UvrD/REP helicase N-terminal domain JRY14_08710 PF13361 UvrD-like helicase C-terminal domain JRY14_08715 PF13673 Acetyltransferase (GNAT) domain JRY14_08725 PF00756 Putative esterase JRY14_08745 PF02368 Bacterial Ig-like domain (group 2) JRY14_08750 PF00474 Sodium:solute symporter family JRY14_08755 PF00425 chorismate binding enzyme JRY14_08755 PF04715 Anthranilate synthase component I, N terminal region JRY14_08760 PF02885 Glycosyl transferase family, helical bundle domain JRY14_08760 PF00591 Glycosyl transferase family, a/b domain JRY14_08760 PF00117 Glutamine amidotransferase class-I JRY14_08765 PF02885 Glycosyl transferase family, helical bundle domain JRY14_08765 PF00591 Glycosyl transferase family, a/b domain JRY14_08770 PF00218 Indole-3-glycerol phosphate synthase JRY14_08775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JRY14_08780 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_08785 PF00290 Tryptophan synthase alpha chain JRY14_08795 PF02652 L-lactate permease JRY14_08800 PF10042 Uncharacterized conserved protein (DUF2278) JRY14_08825 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_08825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JRY14_08835 PF00881 Nitroreductase family JRY14_08850 PF02817 e3 binding domain JRY14_08850 PF00364 Biotin-requiring enzyme JRY14_08850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JRY14_08855 PF00676 Dehydrogenase E1 component JRY14_08855 PF16870 2-oxoglutarate dehydrogenase C-terminal JRY14_08855 PF02779 Transketolase, pyrimidine binding domain JRY14_08860 PF01381 Helix-turn-helix JRY14_08920 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_08920 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_08930 PF12389 Camelysin metallo-endopeptidase JRY14_08940 PF12389 Camelysin metallo-endopeptidase JRY14_08945 PF01381 Helix-turn-helix JRY14_08945 PF08671 Anti-repressor SinI JRY14_08955 PF05547 Immune inhibitor A peptidase M6 JRY14_08960 PF00171 Aldehyde dehydrogenase family JRY14_08965 PF08402 TOBE domain JRY14_08965 PF00005 ABC transporter JRY14_08970 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_08975 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_08980 PF13416 Bacterial extracellular solute-binding protein JRY14_08985 PF01569 PAP2 superfamily JRY14_08990 PF03176 MMPL family JRY14_09000 PF01479 S4 domain JRY14_09000 PF00849 RNA pseudouridylate synthase JRY14_09010 PF00188 Cysteine-rich secretory protein family JRY14_09015 PF02754 Cysteine-rich domain JRY14_09015 PF13183 4Fe-4S dicluster domain JRY14_09020 PF01565 FAD binding domain JRY14_09020 PF02913 FAD linked oxidases, C-terminal domain JRY14_09025 PF13556 PucR C-terminal helix-turn-helix domain JRY14_09025 PF17853 GGDEF-like domain JRY14_09025 PF05651 Putative sugar diacid recognition JRY14_09035 PF00486 Transcriptional regulatory protein, C terminal JRY14_09035 PF00072 Response regulator receiver domain JRY14_09040 PF00512 His Kinase A (phospho-acceptor) domain JRY14_09040 PF18698 Histidine kinase sensor domain JRY14_09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_09040 PF00672 HAMP domain JRY14_09040 PF00989 PAS fold JRY14_09045 PF07729 FCD domain JRY14_09045 PF00392 Bacterial regulatory proteins, gntR family JRY14_09050 PF02754 Cysteine-rich domain JRY14_09055 PF13183 4Fe-4S dicluster domain JRY14_09055 PF11870 Domain of unknown function (DUF3390) JRY14_09055 PF02589 LUD domain JRY14_09060 PF02589 LUD domain JRY14_09065 PF06750 Bacterial Peptidase A24 N-terminal domain JRY14_09065 PF01478 Type IV leader peptidase family JRY14_09075 PF01226 Formate/nitrite transporter JRY14_09080 PF03741 Integral membrane protein TerC family JRY14_09085 PF02386 Cation transport protein JRY14_09090 PF00269 Small, acid-soluble spore proteins, alpha/beta type JRY14_09095 PF01575 MaoC like domain JRY14_09120 PF00561 alpha/beta hydrolase fold JRY14_09130 PF02386 Cation transport protein JRY14_09150 PF00005 ABC transporter JRY14_09150 PF08402 TOBE domain JRY14_09155 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_09160 PF13419 Haloacid dehalogenase-like hydrolase JRY14_09165 PF00266 Aminotransferase class-V JRY14_09175 PF00455 DeoR C terminal sensor domain JRY14_09175 PF08220 DeoR-like helix-turn-helix domain JRY14_09185 PF00596 Class II Aldolase and Adducin N-terminal domain JRY14_09195 PF04748 Divergent polysaccharide deacetylase JRY14_09200 PF09388 Spo0E like sporulation regulatory protein JRY14_09205 PF02743 Cache domain JRY14_09205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_09205 PF00512 His Kinase A (phospho-acceptor) domain JRY14_09210 PF01047 MarR family JRY14_09220 PF12867 DinB superfamily JRY14_09225 PF00512 His Kinase A (phospho-acceptor) domain JRY14_09225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_09225 PF13426 PAS domain JRY14_09225 PF00989 PAS fold JRY14_09225 PF13188 PAS domain JRY14_09230 PF06508 Queuosine biosynthesis protein QueC JRY14_09235 PF01242 6-pyruvoyl tetrahydropterin synthase JRY14_09240 PF04055 Radical SAM superfamily JRY14_09245 PF14489 QueF-like protein JRY14_09250 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JRY14_09280 PF07972 NrdI Flavodoxin like JRY14_09285 PF08343 Ribonucleotide reductase N-terminal JRY14_09285 PF02867 Ribonucleotide reductase, barrel domain JRY14_09285 PF00317 Ribonucleotide reductase, all-alpha domain JRY14_09290 PF00268 Ribonucleotide reductase, small chain JRY14_09295 PF00392 Bacterial regulatory proteins, gntR family JRY14_09300 PF00005 ABC transporter JRY14_09310 PF00005 ABC transporter JRY14_09330 PF01037 Lrp/AsnC ligand binding domain JRY14_09340 PF00857 Isochorismatase family JRY14_09350 PF02016 LD-carboxypeptidase N-terminal domain JRY14_09350 PF17676 LD-carboxypeptidase C-terminal domain JRY14_09355 PF03060 Nitronate monooxygenase JRY14_09360 PF04914 DltD protein JRY14_09365 PF00550 Phosphopantetheine attachment site JRY14_09370 PF03062 MBOAT, membrane-bound O-acyltransferase family JRY14_09375 PF00501 AMP-binding enzyme JRY14_09375 PF13193 AMP-binding enzyme C-terminal domain JRY14_09385 PF01546 Peptidase family M20/M25/M40 JRY14_09385 PF07687 Peptidase dimerisation domain JRY14_09395 PF00258 Flavodoxin JRY14_09430 PF01554 MatE JRY14_09435 PF02673 Bacitracin resistance protein BacA JRY14_09450 PF01047 MarR family JRY14_09460 PF00375 Sodium:dicarboxylate symporter family JRY14_09465 PF02386 Cation transport protein JRY14_09475 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JRY14_09485 PF03698 Uncharacterised protein family (UPF0180) JRY14_09495 PF01063 Amino-transferase class IV JRY14_09500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JRY14_09500 PF00205 Thiamine pyrophosphate enzyme, central domain JRY14_09500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JRY14_09505 PF10369 Small subunit of acetolactate synthase JRY14_09505 PF01842 ACT domain JRY14_09510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JRY14_09510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JRY14_09515 PF00682 HMGL-like JRY14_09515 PF08502 LeuA allosteric (dimerisation) domain JRY14_09520 PF00180 Isocitrate/isopropylmalate dehydrogenase JRY14_09525 PF00330 Aconitase family (aconitate hydratase) JRY14_09530 PF00694 Aconitase C-terminal domain JRY14_09535 PF13393 Histidyl-tRNA synthetase JRY14_09540 PF01634 ATP phosphoribosyltransferase JRY14_09545 PF00815 Histidinol dehydrogenase JRY14_09550 PF00475 Imidazoleglycerol-phosphate dehydratase JRY14_09555 PF00117 Glutamine amidotransferase class-I JRY14_09560 PF00977 Histidine biosynthesis protein JRY14_09565 PF00977 Histidine biosynthesis protein JRY14_09570 PF01502 Phosphoribosyl-AMP cyclohydrolase JRY14_09575 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JRY14_09580 PF02811 PHP domain JRY14_09590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JRY14_09590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JRY14_09595 PF01066 CDP-alcohol phosphatidyltransferase JRY14_09600 PF00884 Sulfatase JRY14_09610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JRY14_09610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JRY14_09620 PF01507 Phosphoadenosine phosphosulfate reductase family JRY14_09625 PF14306 PUA-like domain JRY14_09625 PF01747 ATP-sulfurylase JRY14_09635 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JRY14_09635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JRY14_09645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JRY14_09650 PF01903 CbiX JRY14_09660 PF00209 Sodium:neurotransmitter symporter family JRY14_09675 PF00375 Sodium:dicarboxylate symporter family JRY14_09685 PF03553 Na+/H+ antiporter family JRY14_09700 PF09922 Cell wall-active antibiotics response 4TMS YvqF JRY14_09705 PF07730 Histidine kinase JRY14_09705 PF00672 HAMP domain JRY14_09705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_09710 PF00196 Bacterial regulatory proteins, luxR family JRY14_09710 PF00072 Response regulator receiver domain JRY14_09720 PF05525 Branched-chain amino acid transport protein JRY14_09730 PF01209 ubiE/COQ5 methyltransferase family JRY14_09740 PF00665 Integrase core domain JRY14_09745 PF01695 IstB-like ATP binding protein JRY14_09770 PF00175 Oxidoreductase NAD-binding domain JRY14_09770 PF00970 Oxidoreductase FAD-binding domain JRY14_09770 PF00042 Globin JRY14_09790 PF01925 Sulfite exporter TauE/SafE JRY14_09795 PF01384 Phosphate transporter family JRY14_09800 PF01865 Protein of unknown function DUF47 JRY14_09805 PF00905 Penicillin binding protein transpeptidase domain JRY14_09805 PF00912 Transglycosylase JRY14_09820 PF00989 PAS fold JRY14_09820 PF00512 His Kinase A (phospho-acceptor) domain JRY14_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_09825 PF01904 Protein of unknown function DUF72 JRY14_09835 PF00589 Phage integrase family JRY14_09840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_09840 PF00512 His Kinase A (phospho-acceptor) domain JRY14_09840 PF00989 PAS fold JRY14_09840 PF16736 Single Cache-like JRY14_09845 PF01048 Phosphorylase superfamily JRY14_09855 PF03706 Lysylphosphatidylglycerol synthase TM region JRY14_09855 PF09924 Uncharacterised conserved protein (DUF2156) JRY14_09870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JRY14_09870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JRY14_09875 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_09875 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_09880 PF07670 Nucleoside recognition JRY14_09885 PF07670 Nucleoside recognition JRY14_09890 PF01479 S4 domain JRY14_09890 PF00849 RNA pseudouridylate synthase JRY14_09895 PF00578 AhpC/TSA family JRY14_09900 PF05140 ResB-like family JRY14_09905 PF01578 Cytochrome C assembly protein JRY14_09910 PF00072 Response regulator receiver domain JRY14_09910 PF00486 Transcriptional regulatory protein, C terminal JRY14_09915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_09915 PF00989 PAS fold JRY14_09915 PF00512 His Kinase A (phospho-acceptor) domain JRY14_09915 PF00672 HAMP domain JRY14_09915 PF18698 Histidine kinase sensor domain JRY14_09920 PF01923 Cobalamin adenosyltransferase JRY14_09940 PF12822 ECF transporter, substrate-specific component JRY14_09955 PF00270 DEAD/DEAH box helicase JRY14_09955 PF00271 Helicase conserved C-terminal domain JRY14_09960 PF02517 CPBP intramembrane metalloprotease JRY14_09975 PF13411 MerR HTH family regulatory protein JRY14_09980 PF05389 Negative regulator of genetic competence (MecA) JRY14_09985 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JRY14_09985 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JRY14_10010 PF17763 Glutaminase/Asparaginase C-terminal domain JRY14_10010 PF00710 Asparaginase, N-terminal JRY14_10020 PF02224 Cytidylate kinase JRY14_10025 PF00575 S1 RNA binding domain JRY14_10030 PF01070 FMN-dependent dehydrogenase JRY14_10035 PF14140 YpzI-like protein JRY14_10045 PF14045 YIEGIA protein JRY14_10055 PF01926 50S ribosome-binding GTPase JRY14_10055 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JRY14_10060 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JRY14_10060 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JRY14_10070 PF10966 Protein of unknown function (DUF2768) JRY14_10080 PF09547 Stage IV sporulation protein A (spore_IV_A) JRY14_10085 PF00216 Bacterial DNA-binding protein JRY14_10090 PF01227 GTP cyclohydrolase I JRY14_10095 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JRY14_10100 PF01209 ubiE/COQ5 methyltransferase family JRY14_10105 PF00348 Polyprenyl synthetase JRY14_10110 PF00334 Nucleoside diphosphate kinase JRY14_10120 PF01264 Chorismate synthase JRY14_10125 PF01761 3-dehydroquinate synthase JRY14_10130 PF00155 Aminotransferase class I and II JRY14_10140 PF08864 UPF0302 domain JRY14_10140 PF08858 IDEAL domain JRY14_10145 PF10673 Protein of unknown function (DUF2487) JRY14_10150 PF00355 Rieske [2Fe-2S] domain JRY14_10155 PF00033 Cytochrome b/b6/petB JRY14_10160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JRY14_10160 PF00032 Cytochrome b(C-terminal)/b6/petD JRY14_10165 PF07187 Protein of unknown function (DUF1405) JRY14_10175 PF09577 Sporulation protein YpjB (SpoYpjB) JRY14_10180 PF04298 Putative neutral zinc metallopeptidase JRY14_10190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_10190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_10195 PF03819 MazG nucleotide pyrophosphohydrolase domain JRY14_10200 PF05173 Dihydrodipicolinate reductase, C-terminus JRY14_10200 PF01113 Dihydrodipicolinate reductase, N-terminus JRY14_10205 PF02142 MGS-like domain JRY14_10210 PF02585 GlcNAc-PI de-N-acetylase JRY14_10215 PF13439 Glycosyltransferase Family 4 JRY14_10215 PF00534 Glycosyl transferases group 1 JRY14_10220 PF12627 Probable RNA and SrmB- binding site of polymerase A JRY14_10220 PF01743 Poly A polymerase head domain JRY14_10220 PF13735 tRNA nucleotidyltransferase domain 2 putative JRY14_10225 PF02237 Biotin protein ligase C terminal domain JRY14_10225 PF03099 Biotin/lipoate A/B protein ligase family JRY14_10225 PF08279 HTH domain JRY14_10235 PF02548 Ketopantoate hydroxymethyltransferase JRY14_10240 PF02569 Pantoate-beta-alanine ligase JRY14_10245 PF02261 Aspartate decarboxylase JRY14_10250 PF04851 Type III restriction enzyme, res subunit JRY14_10250 PF00929 Exonuclease JRY14_10250 PF13307 Helicase C-terminal domain JRY14_10255 PF14084 Protein of unknown function (DUF4264) JRY14_10265 PF00155 Aminotransferase class I and II JRY14_10270 PF07261 Replication initiation and membrane attachment JRY14_10275 PF10576 Iron-sulfur binding domain of endonuclease III JRY14_10275 PF00730 HhH-GPD superfamily base excision DNA repair protein JRY14_10275 PF00633 Helix-hairpin-helix motif JRY14_10285 PF00912 Transglycosylase JRY14_10285 PF00905 Penicillin binding protein transpeptidase domain JRY14_10290 PF03838 Recombination protein U JRY14_10295 PF10720 Protein of unknown function (DUF2515) JRY14_10325 PF06908 YspA SLOG family JRY14_10330 PF05103 DivIVA protein JRY14_10340 PF01170 Putative RNA methylase family UPF0020 JRY14_10340 PF02926 THUMP domain JRY14_10360 PF18801 response regulator aspartate phosphatase H, N terminal JRY14_10380 PF13307 Helicase C-terminal domain JRY14_10385 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JRY14_10395 PF00557 Metallopeptidase family M24 JRY14_10400 PF00156 Phosphoribosyl transferase domain JRY14_10405 PF00860 Permease family JRY14_10410 PF04235 Protein of unknown function (DUF418) JRY14_10420 PF00350 Dynamin family JRY14_10430 PF00583 Acetyltransferase (GNAT) family JRY14_10435 PF10752 Protein of unknown function (DUF2533) JRY14_10440 PF00581 Rhodanese-like domain JRY14_10465 PF03738 Glutathionylspermidine synthase preATP-grasp JRY14_10475 PF00689 Cation transporting ATPase, C-terminus JRY14_10475 PF00690 Cation transporter/ATPase, N-terminus JRY14_10480 PF01367 5'-3' exonuclease, C-terminal SAM fold JRY14_10480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JRY14_10495 PF02706 Chain length determinant protein JRY14_10495 PF13807 G-rich domain on putative tyrosine kinase JRY14_10505 PF02397 Bacterial sugar transferase JRY14_10520 PF00535 Glycosyl transferase family 2 JRY14_10525 PF13439 Glycosyltransferase Family 4 JRY14_10525 PF00534 Glycosyl transferases group 1 JRY14_10540 PF13673 Acetyltransferase (GNAT) domain JRY14_10540 PF18014 Acetyltransferase (GNAT) domain JRY14_10560 PF13456 Reverse transcriptase-like JRY14_10565 PF01263 Aldose 1-epimerase JRY14_10595 PF00313 'Cold-shock' DNA-binding domain JRY14_10600 PF08892 YqcI/YcgG family JRY14_10610 PF01810 LysE type translocator JRY14_10630 PF00474 Sodium:solute symporter family JRY14_10635 PF00202 Aminotransferase class-III JRY14_10645 PF00999 Sodium/hydrogen exchanger family JRY14_10650 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JRY14_10650 PF00753 Metallo-beta-lactamase superfamily JRY14_10650 PF17770 Ribonuclease J C-terminal domain JRY14_10655 PF13411 MerR HTH family regulatory protein JRY14_10655 PF06445 GyrI-like small molecule binding domain JRY14_10665 PF04239 Protein of unknown function (DUF421) JRY14_10670 PF02698 DUF218 domain JRY14_10680 PF00881 Nitroreductase family JRY14_10710 PF17209 Hfq protein JRY14_10720 PF01618 MotA/TolQ/ExbB proton channel family JRY14_10725 PF00691 OmpA family JRY14_10725 PF13677 Membrane MotB of proton-channel complex MotA/MotB JRY14_10730 PF00072 Response regulator receiver domain JRY14_10735 PF07194 P2 response regulator binding domain JRY14_10735 PF01627 Hpt domain JRY14_10735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_10735 PF02895 Signal transducing histidine kinase, homodimeric domain JRY14_10735 PF01584 CheW-like domain JRY14_10740 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JRY14_10740 PF04509 CheC-like family JRY14_10755 PF03705 CheR methyltransferase, all-alpha domain JRY14_10755 PF01739 CheR methyltransferase, SAM binding domain JRY14_10775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JRY14_10775 PF00460 Flagella basal body rod protein JRY14_10780 PF00669 Bacterial flagellin N-terminal helical region JRY14_10780 PF00700 Bacterial flagellin C-terminal helical region JRY14_10785 PF02465 Flagellar hook-associated protein 2 N-terminus JRY14_10785 PF07195 Flagellar hook-associated protein 2 C-terminus JRY14_10800 PF00460 Flagella basal body rod protein JRY14_10805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JRY14_10805 PF00460 Flagella basal body rod protein JRY14_10810 PF02049 Flagellar hook-basal body complex protein FliE JRY14_10815 PF08345 Flagellar M-ring protein C-terminal JRY14_10815 PF01514 Secretory protein of YscJ/FliF family JRY14_10820 PF14841 FliG middle domain JRY14_10820 PF14842 FliG N-terminal domain JRY14_10820 PF01706 FliG C-terminal domain JRY14_10830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JRY14_10830 PF02874 ATP synthase alpha/beta family, beta-barrel domain JRY14_10830 PF18269 T3SS EscN ATPase C-terminal domain JRY14_10850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JRY14_10850 PF00460 Flagella basal body rod protein JRY14_10850 PF07559 Flagellar basal body protein FlaE JRY14_10865 PF00072 Response regulator receiver domain JRY14_10865 PF01584 CheW-like domain JRY14_10870 PF12181 DNA binding domain of the motility gene repressor (MogR) JRY14_10875 PF00669 Bacterial flagellin N-terminal helical region JRY14_10875 PF00700 Bacterial flagellin C-terminal helical region JRY14_10880 PF00669 Bacterial flagellin N-terminal helical region JRY14_10880 PF00700 Bacterial flagellin C-terminal helical region JRY14_10885 PF00669 Bacterial flagellin N-terminal helical region JRY14_10885 PF00700 Bacterial flagellin C-terminal helical region JRY14_10890 PF00669 Bacterial flagellin N-terminal helical region JRY14_10890 PF00700 Bacterial flagellin C-terminal helical region JRY14_10895 PF01464 Transglycosylase SLT domain JRY14_10905 PF02154 Flagellar motor switch protein FliM JRY14_10905 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JRY14_10910 PF04509 CheC-like family JRY14_10910 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JRY14_10920 PF00813 FliP family JRY14_10925 PF01313 Bacterial export proteins, family 3 JRY14_10935 PF01312 FlhB HrpN YscU SpaS Family JRY14_10940 PF00771 FHIPEP family JRY14_10945 PF00448 SRP54-type protein, GTPase domain JRY14_10950 PF00460 Flagella basal body rod protein JRY14_10950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JRY14_10955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JRY14_10955 PF02272 DHHA1 domain JRY14_10955 PF01411 tRNA synthetases class II (A) JRY14_11000 PF03992 Antibiotic biosynthesis monooxygenase JRY14_11005 PF08141 Small acid-soluble spore protein H family JRY14_11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_11025 PF03466 LysR substrate binding domain JRY14_11030 PF00005 ABC transporter JRY14_11030 PF08402 TOBE domain JRY14_11040 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_11045 PF00753 Metallo-beta-lactamase superfamily JRY14_11045 PF12706 Beta-lactamase superfamily domain JRY14_11060 PF10787 Uncharacterised protein from bacillus cereus group JRY14_11075 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_11075 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_11080 PF00300 Histidine phosphatase superfamily (branch 1) JRY14_11090 PF00561 alpha/beta hydrolase fold JRY14_11100 PF01047 MarR family JRY14_11110 PF00733 Asparagine synthase JRY14_11110 PF13537 Glutamine amidotransferase domain JRY14_11130 PF16916 Dimerisation domain of Zinc Transporter JRY14_11130 PF01545 Cation efflux family JRY14_11140 PF00392 Bacterial regulatory proteins, gntR family JRY14_11140 PF07729 FCD domain JRY14_11145 PF00892 EamA-like transporter family JRY14_11155 PF07683 Cobalamin synthesis protein cobW C-terminal domain JRY14_11155 PF02492 CobW/HypB/UreG, nucleotide-binding domain JRY14_11160 PF03773 Predicted permease JRY14_11175 PF03553 Na+/H+ antiporter family JRY14_11180 PF13411 MerR HTH family regulatory protein JRY14_11190 PF10415 Fumarase C C-terminus JRY14_11190 PF00206 Lyase JRY14_11210 PF01554 MatE JRY14_11215 PF03575 Peptidase family S51 JRY14_11235 PF02683 Cytochrome C biogenesis protein transmembrane region JRY14_11240 PF00578 AhpC/TSA family JRY14_11255 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_11260 PF04286 Protein of unknown function (DUF445) JRY14_11285 PF00072 Response regulator receiver domain JRY14_11285 PF00196 Bacterial regulatory proteins, luxR family JRY14_11290 PF07730 Histidine kinase JRY14_11290 PF13492 GAF domain JRY14_11290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_11290 PF13185 GAF domain JRY14_11295 PF00005 ABC transporter JRY14_11315 PF13091 PLD-like domain JRY14_11320 PF00696 Amino acid kinase family JRY14_11325 PF00375 Sodium:dicarboxylate symporter family JRY14_11330 PF00206 Lyase JRY14_11330 PF10415 Fumarase C C-terminus JRY14_11335 PF00665 Integrase core domain JRY14_11335 PF13276 HTH-like domain JRY14_11335 PF13333 Integrase core domain JRY14_11350 PF00390 Malic enzyme, N-terminal domain JRY14_11350 PF03949 Malic enzyme, NAD binding domain JRY14_11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_11360 PF00072 Response regulator receiver domain JRY14_11360 PF08664 YcbB domain JRY14_11365 PF00271 Helicase conserved C-terminal domain JRY14_11365 PF00176 SNF2 family N-terminal domain JRY14_11365 PF04434 SWIM zinc finger JRY14_11375 PF03590 Aspartate-ammonia ligase JRY14_11385 PF13840 ACT domain JRY14_11385 PF00696 Amino acid kinase family JRY14_11390 PF01609 Transposase DDE domain JRY14_11400 PF13761 Domain of unknown function (DUF4166) JRY14_11405 PF14158 YndJ-like protein JRY14_11410 PF09297 NADH pyrophosphatase zinc ribbon domain JRY14_11410 PF00293 NUDIX domain JRY14_11415 PF07690 Major Facilitator Superfamily JRY14_11425 PF03976 Polyphosphate kinase 2 (PPK2) JRY14_11430 PF10400 Virulence activator alpha C-term JRY14_11430 PF03551 Transcriptional regulator PadR-like family JRY14_11435 PF07690 Major Facilitator Superfamily JRY14_11445 PF07690 Major Facilitator Superfamily JRY14_11450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JRY14_11450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JRY14_11460 PF16360 GTP-binding GTPase Middle Region JRY14_11460 PF13167 GTP-binding GTPase N-terminal JRY14_11460 PF01926 50S ribosome-binding GTPase JRY14_11480 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_11500 PF00209 Sodium:neurotransmitter symporter family JRY14_11505 PF03422 Carbohydrate binding module (family 6) JRY14_11505 PF00457 Glycosyl hydrolases family 11 JRY14_11505 PF01522 Polysaccharide deacetylase JRY14_11515 PF04239 Protein of unknown function (DUF421) JRY14_11535 PF01625 Peptide methionine sulfoxide reductase JRY14_11545 PF01063 Amino-transferase class IV JRY14_11550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JRY14_11550 PF00205 Thiamine pyrophosphate enzyme, central domain JRY14_11550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JRY14_11560 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JRY14_11560 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JRY14_11565 PF00920 Dehydratase family JRY14_11570 PF00585 C-terminal regulatory domain of Threonine dehydratase JRY14_11570 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_11575 PF09587 Bacterial capsule synthesis protein PGA_cap JRY14_11590 PF07690 Major Facilitator Superfamily JRY14_11595 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JRY14_11605 PF00072 Response regulator receiver domain JRY14_11605 PF04397 LytTr DNA-binding domain JRY14_11610 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JRY14_11610 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JRY14_11615 PF13673 Acetyltransferase (GNAT) domain JRY14_11625 PF01979 Amidohydrolase family JRY14_11630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_11635 PF13302 Acetyltransferase (GNAT) domain JRY14_11640 PF00072 Response regulator receiver domain JRY14_11640 PF00486 Transcriptional regulatory protein, C terminal JRY14_11645 PF00512 His Kinase A (phospho-acceptor) domain JRY14_11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_11655 PF01566 Natural resistance-associated macrophage protein JRY14_11660 PF00581 Rhodanese-like domain JRY14_11660 PF12368 Rhodanase C-terminal JRY14_11660 PF17773 UPF0176 acylphosphatase like domain JRY14_11670 PF08546 Ketopantoate reductase PanE/ApbA C terminal JRY14_11670 PF02558 Ketopantoate reductase PanE/ApbA JRY14_11675 PF13520 Amino acid permease JRY14_11685 PF05791 Bacillus haemolytic enterotoxin (HBL) JRY14_11690 PF05791 Bacillus haemolytic enterotoxin (HBL) JRY14_11700 PF13088 BNR repeat-like domain JRY14_11700 PF00754 F5/8 type C domain JRY14_11700 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase JRY14_11705 PF02073 Thermophilic metalloprotease (M29) JRY14_11720 PF00583 Acetyltransferase (GNAT) family JRY14_11730 PF01609 Transposase DDE domain JRY14_11735 PF01609 Transposase DDE domain JRY14_11740 PF01609 Transposase DDE domain JRY14_11750 PF01609 Transposase DDE domain JRY14_11755 PF01609 Transposase DDE domain JRY14_11765 PF01906 Putative heavy-metal-binding JRY14_11770 PF02517 CPBP intramembrane metalloprotease JRY14_11775 PF00440 Bacterial regulatory proteins, tetR family JRY14_11780 PF04198 Putative sugar-binding domain JRY14_11785 PF01791 DeoC/LacD family aldolase JRY14_11790 PF07662 Na+ dependent nucleoside transporter C-terminus JRY14_11790 PF01773 Na+ dependent nucleoside transporter N-terminus JRY14_11795 PF02885 Glycosyl transferase family, helical bundle domain JRY14_11795 PF00591 Glycosyl transferase family, a/b domain JRY14_11795 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JRY14_11800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JRY14_11805 PF07301 Protein of unknown function (DUF1453) JRY14_11810 PF05979 Bacterial protein of unknown function (DUF896) JRY14_11825 PF03466 LysR substrate binding domain JRY14_11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_11840 PF00557 Metallopeptidase family M24 JRY14_11840 PF05195 Aminopeptidase P, N-terminal domain JRY14_11850 PF00394 Multicopper oxidase JRY14_11850 PF07731 Multicopper oxidase JRY14_11850 PF07732 Multicopper oxidase JRY14_11855 PF01551 Peptidase family M23 JRY14_11865 PF00440 Bacterial regulatory proteins, tetR family JRY14_11870 PF00975 Thioesterase domain JRY14_11875 PF00550 Phosphopantetheine attachment site JRY14_11875 PF02801 Beta-ketoacyl synthase, C-terminal domain JRY14_11875 PF00109 Beta-ketoacyl synthase, N-terminal domain JRY14_11875 PF16197 Ketoacyl-synthetase C-terminal extension JRY14_11875 PF00668 Condensation domain JRY14_11875 PF13193 AMP-binding enzyme C-terminal domain JRY14_11875 PF00501 AMP-binding enzyme JRY14_11875 PF16197 Ketoacyl-synthetase C-terminal extension JRY14_11875 PF00202 Aminotransferase class-III JRY14_11875 PF00550 Phosphopantetheine attachment site JRY14_11875 PF00501 AMP-binding enzyme JRY14_11875 PF00202 Aminotransferase class-III JRY14_11875 PF00109 Beta-ketoacyl synthase, N-terminal domain JRY14_11875 PF02801 Beta-ketoacyl synthase, C-terminal domain JRY14_11875 PF13193 AMP-binding enzyme C-terminal domain JRY14_11875 PF00668 Condensation domain JRY14_11890 PF01695 IstB-like ATP binding protein JRY14_11895 PF00665 Integrase core domain JRY14_11900 PF00550 Phosphopantetheine attachment site JRY14_11900 PF00668 Condensation domain JRY14_11900 PF13193 AMP-binding enzyme C-terminal domain JRY14_11900 PF00501 AMP-binding enzyme JRY14_11905 PF00698 Acyl transferase domain JRY14_11910 PF02801 Beta-ketoacyl synthase, C-terminal domain JRY14_11910 PF00550 Phosphopantetheine attachment site JRY14_11910 PF02801 Beta-ketoacyl synthase, C-terminal domain JRY14_11910 PF00109 Beta-ketoacyl synthase, N-terminal domain JRY14_11910 PF00668 Condensation domain JRY14_11910 PF13193 AMP-binding enzyme C-terminal domain JRY14_11910 PF16197 Ketoacyl-synthetase C-terminal extension JRY14_11910 PF00202 Aminotransferase class-III JRY14_11910 PF00202 Aminotransferase class-III JRY14_11910 PF00501 AMP-binding enzyme JRY14_11910 PF13193 AMP-binding enzyme C-terminal domain JRY14_11910 PF00668 Condensation domain JRY14_11910 PF16197 Ketoacyl-synthetase C-terminal extension JRY14_11910 PF00109 Beta-ketoacyl synthase, N-terminal domain JRY14_11910 PF00501 AMP-binding enzyme JRY14_11910 PF00550 Phosphopantetheine attachment site JRY14_11915 PF00501 AMP-binding enzyme JRY14_11915 PF00550 Phosphopantetheine attachment site JRY14_11915 PF00668 Condensation domain JRY14_11915 PF13193 AMP-binding enzyme C-terminal domain JRY14_11920 PF07690 Major Facilitator Superfamily JRY14_11925 PF01648 4'-phosphopantetheinyl transferase superfamily JRY14_11935 PF01131 DNA topoisomerase JRY14_11935 PF01751 Toprim domain JRY14_11935 PF13342 C-terminal repeat of topoisomerase JRY14_11935 PF01396 Topoisomerase DNA binding C4 zinc finger JRY14_11950 PF02525 Flavodoxin-like fold JRY14_11955 PF05525 Branched-chain amino acid transport protein JRY14_11960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_11965 PF13115 YtkA-like JRY14_11965 PF04234 CopC domain JRY14_11965 PF05425 Copper resistance protein D JRY14_11970 PF07987 Domain of unkown function (DUF1775) JRY14_11990 PF03466 LysR substrate binding domain JRY14_11990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_11995 PF02082 Transcriptional regulator JRY14_12005 PF00881 Nitroreductase family JRY14_12015 PF01594 AI-2E family transporter JRY14_12020 PF00056 lactate/malate dehydrogenase, NAD binding domain JRY14_12020 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JRY14_12025 PF01593 Flavin containing amine oxidoreductase JRY14_12030 PF02492 CobW/HypB/UreG, nucleotide-binding domain JRY14_12030 PF07683 Cobalamin synthesis protein cobW C-terminal domain JRY14_12040 PF12399 Branched-chain amino acid ATP-binding cassette transporter JRY14_12040 PF00005 ABC transporter JRY14_12045 PF00005 ABC transporter JRY14_12050 PF02653 Branched-chain amino acid transport system / permease component JRY14_12060 PF03466 LysR substrate binding domain JRY14_12060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_12080 PF01047 MarR family JRY14_12090 PF01654 Cytochrome bd terminal oxidase subunit I JRY14_12095 PF02322 Cytochrome bd terminal oxidase subunit II JRY14_12105 PF00005 ABC transporter JRY14_12105 PF00664 ABC transporter transmembrane region JRY14_12115 PF00535 Glycosyl transferase family 2 JRY14_12120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JRY14_12125 PF00132 Bacterial transferase hexapeptide (six repeats) JRY14_12150 PF17676 LD-carboxypeptidase C-terminal domain JRY14_12150 PF02016 LD-carboxypeptidase N-terminal domain JRY14_12155 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_12155 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_12170 PF01476 LysM domain JRY14_12170 PF00877 NlpC/P60 family JRY14_12180 PF00664 ABC transporter transmembrane region JRY14_12180 PF00005 ABC transporter JRY14_12185 PF02796 Helix-turn-helix domain of resolvase JRY14_12185 PF00239 Resolvase, N terminal domain JRY14_12265 PF03374 Phage antirepressor protein KilAC domain JRY14_12265 PF09669 Phage regulatory protein Rha (Phage_pRha) JRY14_12295 PF00772 DnaB-like helicase N terminal domain JRY14_12295 PF03796 DnaB-like helicase C terminal domain JRY14_12455 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_12455 PF12123 N-acetylmuramoyl-l-alanine amidase JRY14_12460 PF00664 ABC transporter transmembrane region JRY14_12460 PF00005 ABC transporter JRY14_12465 PF00072 Response regulator receiver domain JRY14_12465 PF00486 Transcriptional regulatory protein, C terminal JRY14_12470 PF16736 Single Cache-like JRY14_12470 PF00989 PAS fold JRY14_12470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_12470 PF00512 His Kinase A (phospho-acceptor) domain JRY14_12480 PF00106 short chain dehydrogenase JRY14_12485 PF04439 Streptomycin adenylyltransferase JRY14_12490 PF01522 Polysaccharide deacetylase JRY14_12510 PF01548 Transposase JRY14_12510 PF02371 Transposase IS116/IS110/IS902 family JRY14_12515 PF00742 Homoserine dehydrogenase JRY14_12515 PF01842 ACT domain JRY14_12515 PF03447 Homoserine dehydrogenase, NAD binding domain JRY14_12520 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_12525 PF08544 GHMP kinases C terminal JRY14_12525 PF00288 GHMP kinases N terminal domain JRY14_12540 PF03816 Cell envelope-related transcriptional attenuator domain JRY14_12550 PF00486 Transcriptional regulatory protein, C terminal JRY14_12550 PF00072 Response regulator receiver domain JRY14_12555 PF16736 Single Cache-like JRY14_12555 PF00512 His Kinase A (phospho-acceptor) domain JRY14_12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_12555 PF00989 PAS fold JRY14_12560 PF01522 Polysaccharide deacetylase JRY14_12570 PF02308 MgtC family JRY14_12575 PF00583 Acetyltransferase (GNAT) family JRY14_12580 PF04183 IucA / IucC family JRY14_12580 PF06276 Ferric iron reductase FhuF-like transporter JRY14_12585 PF06276 Ferric iron reductase FhuF-like transporter JRY14_12585 PF04183 IucA / IucC family JRY14_12590 PF13193 AMP-binding enzyme C-terminal domain JRY14_12590 PF00501 AMP-binding enzyme JRY14_12605 PF01261 Xylose isomerase-like TIM barrel JRY14_12610 PF00269 Small, acid-soluble spore proteins, alpha/beta type JRY14_12615 PF07690 Major Facilitator Superfamily JRY14_12620 PF01810 LysE type translocator JRY14_12625 PF00155 Aminotransferase class I and II JRY14_12625 PF00392 Bacterial regulatory proteins, gntR family JRY14_12635 PF01734 Patatin-like phospholipase JRY14_12665 PF00293 NUDIX domain JRY14_12670 PF02540 NAD synthase JRY14_12675 PF02687 FtsX-like permease family JRY14_12680 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JRY14_12680 PF18277 AbrB C-terminal domain JRY14_12685 PF00082 Subtilase family JRY14_12690 PF01022 Bacterial regulatory protein, arsR family JRY14_12695 PF00248 Aldo/keto reductase family JRY14_12700 PF07690 Major Facilitator Superfamily JRY14_12720 PF03193 RsgA GTPase JRY14_12725 PF02743 Cache domain JRY14_12725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_12725 PF00672 HAMP domain JRY14_12745 PF00210 Ferritin-like domain JRY14_12760 PF00296 Luciferase-like monooxygenase JRY14_12770 PF01593 Flavin containing amine oxidoreductase JRY14_12775 PF13302 Acetyltransferase (GNAT) domain JRY14_12780 PF00248 Aldo/keto reductase family JRY14_12790 PF07683 Cobalamin synthesis protein cobW C-terminal domain JRY14_12790 PF02492 CobW/HypB/UreG, nucleotide-binding domain JRY14_12795 PF00583 Acetyltransferase (GNAT) family JRY14_12800 PF01297 Zinc-uptake complex component A periplasmic JRY14_12810 PF01609 Transposase DDE domain JRY14_12815 PF13460 NAD(P)H-binding JRY14_12820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JRY14_12825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JRY14_12825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JRY14_12835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_12840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_12850 PF00300 Histidine phosphatase superfamily (branch 1) JRY14_12860 PF08757 CotH kinase protein JRY14_12865 PF00293 NUDIX domain JRY14_12870 PF09335 SNARE associated Golgi protein JRY14_12875 PF01943 Polysaccharide biosynthesis protein JRY14_12875 PF14667 Polysaccharide biosynthesis C-terminal domain JRY14_12885 PF03773 Predicted permease JRY14_12890 PF09323 Domain of unknown function (DUF1980) JRY14_12895 PF03061 Thioesterase superfamily JRY14_12905 PF13396 Phospholipase_D-nuclease N-terminal JRY14_12905 PF13091 PLD-like domain JRY14_12920 PF13460 NAD(P)H-binding JRY14_12925 PF04306 Protein of unknown function (DUF456) JRY14_12930 PF01595 Cyclin M transmembrane N-terminal domain JRY14_12930 PF03471 Transporter associated domain JRY14_12930 PF00571 CBS domain JRY14_12945 PF05525 Branched-chain amino acid transport protein JRY14_12950 PF01588 Putative tRNA binding domain JRY14_12970 PF07454 Stage II sporulation protein P (SpoIIP) JRY14_12980 PF02557 D-alanyl-D-alanine carboxypeptidase JRY14_12990 PF07690 Major Facilitator Superfamily JRY14_13000 PF01145 SPFH domain / Band 7 family JRY14_13005 PF07454 Stage II sporulation protein P (SpoIIP) JRY14_13030 PF00842 Alanine racemase, C-terminal domain JRY14_13030 PF01168 Alanine racemase, N-terminal domain JRY14_13045 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JRY14_13050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_13050 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_13055 PF00155 Aminotransferase class I and II JRY14_13055 PF00392 Bacterial regulatory proteins, gntR family JRY14_13085 PF00583 Acetyltransferase (GNAT) family JRY14_13100 PF06013 Proteins of 100 residues with WXG JRY14_13115 PF08817 WXG100 protein secretion system (Wss), protein YukD JRY14_13120 PF10140 WXG100 protein secretion system (Wss), protein YukC JRY14_13125 PF12538 DNA transporter JRY14_13125 PF01580 FtsK/SpoIIIE family JRY14_13200 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JRY14_13205 PF13276 HTH-like domain JRY14_13205 PF00665 Integrase core domain JRY14_13205 PF13333 Integrase core domain JRY14_13235 PF01209 ubiE/COQ5 methyltransferase family JRY14_13240 PF01268 Formate--tetrahydrofolate ligase JRY14_13250 PF00270 DEAD/DEAH box helicase JRY14_13250 PF00271 Helicase conserved C-terminal domain JRY14_13255 PF01261 Xylose isomerase-like TIM barrel JRY14_13260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_13270 PF00107 Zinc-binding dehydrogenase JRY14_13270 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_13290 PF00258 Flavodoxin JRY14_13290 PF01613 Flavin reductase like domain JRY14_13300 PF00255 Glutathione peroxidase JRY14_13305 PF13559 Domain of unknown function (DUF4129) JRY14_13305 PF11992 Domain of unknown function (DUF3488) JRY14_13305 PF01841 Transglutaminase-like superfamily JRY14_13310 PF01882 Protein of unknown function DUF58 JRY14_13315 PF17863 AAA lid domain JRY14_13315 PF07726 ATPase family associated with various cellular activities (AAA) JRY14_13320 PF14710 Respiratory nitrate reductase alpha N-terminal JRY14_13320 PF00384 Molybdopterin oxidoreductase JRY14_13320 PF01568 Molydopterin dinucleotide binding domain JRY14_13325 PF14711 Respiratory nitrate reductase beta C-terminal JRY14_13325 PF13247 4Fe-4S dicluster domain JRY14_13330 PF02613 Nitrate reductase delta subunit JRY14_13335 PF02665 Nitrate reductase gamma subunit JRY14_13340 PF00325 Bacterial regulatory proteins, crp family JRY14_13340 PF00027 Cyclic nucleotide-binding domain JRY14_13345 PF04055 Radical SAM superfamily JRY14_13345 PF06463 Molybdenum Cofactor Synthesis C JRY14_13350 PF00899 ThiF family JRY14_13355 PF00994 Probable molybdopterin binding domain JRY14_13355 PF03454 MoeA C-terminal region (domain IV) JRY14_13355 PF03453 MoeA N-terminal region (domain I and II) JRY14_13360 PF02391 MoaE protein JRY14_13370 PF07690 Major Facilitator Superfamily JRY14_13395 PF01903 CbiX JRY14_13400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JRY14_13405 PF00355 Rieske [2Fe-2S] domain JRY14_13410 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_13410 PF18267 Rubredoxin NAD+ reductase C-terminal domain JRY14_13410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JRY14_13410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JRY14_13410 PF04324 BFD-like [2Fe-2S] binding domain JRY14_13425 PF01609 Transposase DDE domain JRY14_13465 PF04232 Stage V sporulation protein S (SpoVS) JRY14_13490 PF17874 MalT-like TPR region JRY14_13490 PF18801 response regulator aspartate phosphatase H, N terminal JRY14_13505 PF01966 HD domain JRY14_13510 PF00005 ABC transporter JRY14_13510 PF16326 ABC transporter C-terminal domain JRY14_13510 PF12848 ABC transporter JRY14_13525 PF00436 Single-strand binding protein family JRY14_13530 PF01609 Transposase DDE domain JRY14_13535 PF01609 Transposase DDE domain JRY14_13540 PF08712 Scaffold protein Nfu/NifU N terminal JRY14_13540 PF13769 Virulence factor JRY14_13555 PF06491 Disulphide isomerase JRY14_13560 PF04445 Putative SAM-dependent methyltransferase JRY14_13565 PF00750 tRNA synthetases class I (R) JRY14_13565 PF05746 DALR anticodon binding domain JRY14_13565 PF03485 Arginyl tRNA synthetase N terminal domain JRY14_13590 PF08264 Anticodon-binding domain of tRNA JRY14_13590 PF00133 tRNA synthetases class I (I, L, M and V) JRY14_13600 PF02371 Transposase IS116/IS110/IS902 family JRY14_13600 PF01548 Transposase JRY14_13625 PF00152 tRNA synthetases class II (D, K and N) JRY14_13625 PF01336 OB-fold nucleic acid binding domain JRY14_13630 PF00209 Sodium:neurotransmitter symporter family JRY14_13645 PF10997 Alternate to MurJ JRY14_13650 PF13419 Haloacid dehalogenase-like hydrolase JRY14_13660 PF00465 Iron-containing alcohol dehydrogenase JRY14_13665 PF01177 Asp/Glu/Hydantoin racemase JRY14_13670 PF01980 tRNA-methyltransferase O JRY14_13675 PF00583 Acetyltransferase (GNAT) family JRY14_13680 PF11188 Protein of unknown function (DUF2975) JRY14_13685 PF13443 Cro/C1-type HTH DNA-binding domain JRY14_13690 PF08645 Polynucleotide kinase 3 phosphatase JRY14_13700 PF00005 ABC transporter JRY14_13705 PF05975 Bacterial ABC transporter protein EcsB JRY14_13710 PF14005 YpjP-like protein JRY14_13715 PF13419 Haloacid dehalogenase-like hydrolase JRY14_13730 PF07930 D-aminopeptidase, domain B JRY14_13730 PF00144 Beta-lactamase JRY14_13735 PF00303 Thymidylate synthase JRY14_13740 PF00186 Dihydrofolate reductase JRY14_13745 PF05223 NTF2-like N-terminal transpeptidase domain JRY14_13745 PF03717 Penicillin-binding Protein dimerisation domain JRY14_13745 PF00905 Penicillin binding protein transpeptidase domain JRY14_13750 PF02525 Flavodoxin-like fold JRY14_13755 PF01553 Acyltransferase JRY14_13760 PF03006 Haemolysin-III related JRY14_13765 PF02416 mttA/Hcf106 family JRY14_13770 PF00902 Sec-independent protein translocase protein (TatC) JRY14_13780 PF02645 Uncharacterised protein, DegV family COG1307 JRY14_13790 PF02630 SCO1/SenC JRY14_13795 PF00011 Hsp20/alpha crystallin family JRY14_13800 PF00733 Asparagine synthase JRY14_13800 PF13537 Glutamine amidotransferase domain JRY14_13810 PF01609 Transposase DDE domain JRY14_13820 PF05036 Sporulation related domain JRY14_13820 PF01520 N-acetylmuramoyl-L-alanine amidase JRY14_13825 PF01497 Periplasmic binding protein JRY14_13830 PF01063 Amino-transferase class IV JRY14_13840 PF00881 Nitroreductase family JRY14_13855 PF00857 Isochorismatase family JRY14_13870 PF00011 Hsp20/alpha crystallin family JRY14_13875 PF00924 Mechanosensitive ion channel JRY14_13880 PF13185 GAF domain JRY14_13880 PF07730 Histidine kinase JRY14_13885 PF00196 Bacterial regulatory proteins, luxR family JRY14_13885 PF00072 Response regulator receiver domain JRY14_13890 PF01380 SIS domain JRY14_13890 PF01418 Helix-turn-helix domain, rpiR family JRY14_13900 PF01609 Transposase DDE domain JRY14_13910 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_13910 PF00107 Zinc-binding dehydrogenase JRY14_13925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JRY14_13925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JRY14_13930 PF02447 GntP family permease JRY14_13935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JRY14_13935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JRY14_13940 PF10924 Protein of unknown function (DUF2711) JRY14_13955 PF03358 NADPH-dependent FMN reductase JRY14_13970 PF00571 CBS domain JRY14_13970 PF00005 ABC transporter JRY14_13975 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_13980 PF13520 Amino acid permease JRY14_14010 PF03471 Transporter associated domain JRY14_14010 PF00571 CBS domain JRY14_14010 PF01595 Cyclin M transmembrane N-terminal domain JRY14_14015 PF00171 Aldehyde dehydrogenase family JRY14_14020 PF07997 Protein of unknown function (DUF1694) JRY14_14025 PF09385 Histidine kinase N terminal JRY14_14035 PF00202 Aminotransferase class-III JRY14_14040 PF01144 Coenzyme A transferase JRY14_14045 PF01144 Coenzyme A transferase JRY14_14050 PF07687 Peptidase dimerisation domain JRY14_14050 PF01546 Peptidase family M20/M25/M40 JRY14_14055 PF00583 Acetyltransferase (GNAT) family JRY14_14060 PF02954 Bacterial regulatory protein, Fis family JRY14_14060 PF00158 Sigma-54 interaction domain JRY14_14060 PF13426 PAS domain JRY14_14070 PF12544 Lysine-2,3-aminomutase JRY14_14075 PF14122 YokU-like protein, putative antitoxin JRY14_14080 PF06855 YozE SAM-like fold JRY14_14095 PF14162 YozD-like protein JRY14_14105 PF08239 Bacterial SH3 domain JRY14_14105 PF00069 Protein kinase domain JRY14_14115 PF01569 PAP2 superfamily JRY14_14120 PF01545 Cation efflux family JRY14_14120 PF16916 Dimerisation domain of Zinc Transporter JRY14_14125 PF00085 Thioredoxin JRY14_14190 PF10676 Spore germination protein gerPA/gerPF JRY14_14225 PF00912 Transglycosylase JRY14_14225 PF00905 Penicillin binding protein transpeptidase domain JRY14_14235 PF07690 Major Facilitator Superfamily JRY14_14240 PF01521 Iron-sulphur cluster biosynthesis JRY14_14245 PF00285 Citrate synthase, C-terminal domain JRY14_14250 PF03972 MmgE/PrpD family JRY14_14260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JRY14_14260 PF02770 Acyl-CoA dehydrogenase, middle domain JRY14_14260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JRY14_14265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JRY14_14265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JRY14_14270 PF00171 Aldehyde dehydrogenase family JRY14_14275 PF01810 LysE type translocator JRY14_14280 PF00378 Enoyl-CoA hydratase/isomerase JRY14_14295 PF12320 Type 5 capsule protein repressor C-terminal domain JRY14_14295 PF00149 Calcineurin-like phosphoesterase JRY14_14300 PF13476 AAA domain JRY14_14315 PF01022 Bacterial regulatory protein, arsR family JRY14_14330 PF07690 Major Facilitator Superfamily JRY14_14335 PF00106 short chain dehydrogenase JRY14_14340 PF00425 chorismate binding enzyme JRY14_14345 PF13193 AMP-binding enzyme C-terminal domain JRY14_14345 PF00501 AMP-binding enzyme JRY14_14350 PF00857 Isochorismatase family JRY14_14350 PF00550 Phosphopantetheine attachment site JRY14_14355 PF00668 Condensation domain JRY14_14355 PF13193 AMP-binding enzyme C-terminal domain JRY14_14355 PF00501 AMP-binding enzyme JRY14_14355 PF00975 Thioesterase domain JRY14_14355 PF00550 Phosphopantetheine attachment site JRY14_14360 PF03621 MbtH-like protein JRY14_14365 PF07690 Major Facilitator Superfamily JRY14_14380 PF00216 Bacterial DNA-binding protein JRY14_14390 PF05163 DinB family JRY14_14395 PF00082 Subtilase family JRY14_14400 PF01235 Sodium:alanine symporter family JRY14_14420 PF01479 S4 domain JRY14_14420 PF00849 RNA pseudouridylate synthase JRY14_14425 PF02824 TGS domain JRY14_14425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JRY14_14425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JRY14_14425 PF03129 Anticodon binding domain JRY14_14430 PF00005 ABC transporter JRY14_14440 PF07690 Major Facilitator Superfamily JRY14_14455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JRY14_14455 PF00205 Thiamine pyrophosphate enzyme, central domain JRY14_14455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JRY14_14500 PF00027 Cyclic nucleotide-binding domain JRY14_14510 PF00561 alpha/beta hydrolase fold JRY14_14520 PF16123 Hydroxyacylglutathione hydrolase C-terminus JRY14_14520 PF00753 Metallo-beta-lactamase superfamily JRY14_14530 PF03176 MMPL family JRY14_14540 PF00302 Chloramphenicol acetyltransferase JRY14_14545 PF01609 Transposase DDE domain JRY14_14555 PF00583 Acetyltransferase (GNAT) family JRY14_14580 PF01593 Flavin containing amine oxidoreductase JRY14_14590 PF13302 Acetyltransferase (GNAT) domain JRY14_14600 PF00313 'Cold-shock' DNA-binding domain JRY14_14620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_14620 PF03466 LysR substrate binding domain JRY14_14625 PF02774 Semialdehyde dehydrogenase, dimerisation domain JRY14_14625 PF01118 Semialdehyde dehydrogenase, NAD binding domain JRY14_14645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_14645 PF03466 LysR substrate binding domain JRY14_14650 PF03475 3-alpha domain JRY14_14650 PF03473 MOSC domain JRY14_14665 PF00005 ABC transporter JRY14_14665 PF00664 ABC transporter transmembrane region JRY14_14695 PF01810 LysE type translocator JRY14_14700 PF01381 Helix-turn-helix JRY14_14700 PF07883 Cupin domain JRY14_14730 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_14730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JRY14_14735 PF12680 SnoaL-like domain JRY14_14735 PF08281 Sigma-70, region 4 JRY14_14735 PF04542 Sigma-70 region 2 JRY14_14760 PF02638 Glycosyl hydrolase-like 10 JRY14_14770 PF02378 Phosphotransferase system, EIIC JRY14_14780 PF03702 Anhydro-N-acetylmuramic acid kinase JRY14_14785 PF01869 BadF/BadG/BcrA/BcrD ATPase family JRY14_14790 PF02660 Glycerol-3-phosphate acyltransferase JRY14_14795 PF00266 Aminotransferase class-V JRY14_14800 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_14805 PF01047 MarR family JRY14_14810 PF07690 Major Facilitator Superfamily JRY14_14820 PF16123 Hydroxyacylglutathione hydrolase C-terminus JRY14_14820 PF00753 Metallo-beta-lactamase superfamily JRY14_14830 PF00270 DEAD/DEAH box helicase JRY14_14830 PF00271 Helicase conserved C-terminal domain JRY14_14850 PF18277 AbrB C-terminal domain JRY14_14850 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JRY14_14890 PF00589 Phage integrase family JRY14_14895 PF00561 alpha/beta hydrolase fold JRY14_14915 PF03848 Tellurite resistance protein TehB JRY14_14915 PF09313 Domain of unknown function (DUF1971) JRY14_14925 PF08241 Methyltransferase domain JRY14_14930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JRY14_14930 PF00205 Thiamine pyrophosphate enzyme, central domain JRY14_14930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JRY14_14935 PF12802 MarR family JRY14_14940 PF00300 Histidine phosphatase superfamily (branch 1) JRY14_14945 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JRY14_14965 PF07687 Peptidase dimerisation domain JRY14_14965 PF01546 Peptidase family M20/M25/M40 JRY14_14980 PF04371 Porphyromonas-type peptidyl-arginine deiminase JRY14_14985 PF00196 Bacterial regulatory proteins, luxR family JRY14_14985 PF00072 Response regulator receiver domain JRY14_14995 PF18277 AbrB C-terminal domain JRY14_14995 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JRY14_15010 PF01925 Sulfite exporter TauE/SafE JRY14_15015 PF00132 Bacterial transferase hexapeptide (six repeats) JRY14_15020 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_15020 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_15035 PF07690 Major Facilitator Superfamily JRY14_15040 PF00501 AMP-binding enzyme JRY14_15040 PF00550 Phosphopantetheine attachment site JRY14_15040 PF00668 Condensation domain JRY14_15040 PF13193 AMP-binding enzyme C-terminal domain JRY14_15045 PF00550 Phosphopantetheine attachment site JRY14_15045 PF07993 Male sterility protein JRY14_15045 PF00501 AMP-binding enzyme JRY14_15045 PF13193 AMP-binding enzyme C-terminal domain JRY14_15045 PF00668 Condensation domain JRY14_15055 PF02371 Transposase IS116/IS110/IS902 family JRY14_15055 PF01548 Transposase JRY14_15070 PF01648 4'-phosphopantetheinyl transferase superfamily JRY14_15075 PF00975 Thioesterase domain JRY14_15115 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_15130 PF00665 Integrase core domain JRY14_15135 PF01695 IstB-like ATP binding protein JRY14_15145 PF13302 Acetyltransferase (GNAT) domain JRY14_15155 PF00395 S-layer homology domain JRY14_15155 PF01520 N-acetylmuramoyl-L-alanine amidase JRY14_15175 PF00027 Cyclic nucleotide-binding domain JRY14_15175 PF01734 Patatin-like phospholipase JRY14_15190 PF00440 Bacterial regulatory proteins, tetR family JRY14_15190 PF18665 Tetracyclin repressor-like, C-terminal domain JRY14_15195 PF01752 Collagenase JRY14_15195 PF18496 Collagenase G catalytic helper subdomain JRY14_15195 PF08453 Peptidase family M9 N-terminal JRY14_15200 PF11954 Domain of unknown function (DUF3471) JRY14_15200 PF00144 Beta-lactamase JRY14_15205 PF05223 NTF2-like N-terminal transpeptidase domain JRY14_15205 PF00905 Penicillin binding protein transpeptidase domain JRY14_15205 PF03717 Penicillin-binding Protein dimerisation domain JRY14_15210 PF04542 Sigma-70 region 2 JRY14_15210 PF08281 Sigma-70, region 4 JRY14_15220 PF03717 Penicillin-binding Protein dimerisation domain JRY14_15220 PF00905 Penicillin binding protein transpeptidase domain JRY14_15225 PF00905 Penicillin binding protein transpeptidase domain JRY14_15225 PF03717 Penicillin-binding Protein dimerisation domain JRY14_15235 PF00149 Calcineurin-like phosphoesterase JRY14_15245 PF00005 ABC transporter JRY14_15255 PF08359 YsiA-like protein, C-terminal region JRY14_15255 PF00440 Bacterial regulatory proteins, tetR family JRY14_15270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JRY14_15270 PF02770 Acyl-CoA dehydrogenase, middle domain JRY14_15270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JRY14_15275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JRY14_15275 PF02785 Biotin carboxylase C-terminal domain JRY14_15275 PF00289 Biotin carboxylase, N-terminal domain JRY14_15280 PF00364 Biotin-requiring enzyme JRY14_15285 PF00682 HMGL-like JRY14_15290 PF00378 Enoyl-CoA hydratase/isomerase JRY14_15295 PF01039 Carboxyl transferase domain JRY14_15300 PF16177 Acetyl-coenzyme A synthetase N-terminus JRY14_15300 PF00501 AMP-binding enzyme JRY14_15300 PF13193 AMP-binding enzyme C-terminal domain JRY14_15310 PF01548 Transposase JRY14_15310 PF02371 Transposase IS116/IS110/IS902 family JRY14_15325 PF00485 Phosphoribulokinase / Uridine kinase family JRY14_15335 PF05163 DinB family JRY14_15340 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_15340 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_15345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_15345 PF00512 His Kinase A (phospho-acceptor) domain JRY14_15350 PF00072 Response regulator receiver domain JRY14_15350 PF00486 Transcriptional regulatory protein, C terminal JRY14_15360 PF13021 Domain of unknown function (DUF3885) JRY14_15365 PF01048 Phosphorylase superfamily JRY14_15380 PF01447 Thermolysin metallopeptidase, catalytic domain JRY14_15380 PF07504 Fungalysin/Thermolysin Propeptide Motif JRY14_15380 PF03413 Peptidase propeptide and YPEB domain JRY14_15380 PF02868 Thermolysin metallopeptidase, alpha-helical domain JRY14_15385 PF12833 Helix-turn-helix domain JRY14_15385 PF17853 GGDEF-like domain JRY14_15430 PF00005 ABC transporter JRY14_15430 PF17755 UvrA DNA-binding domain JRY14_15430 PF17760 UvrA interaction domain JRY14_15455 PF01695 IstB-like ATP binding protein JRY14_15460 PF00665 Integrase core domain JRY14_15470 PF07690 Major Facilitator Superfamily JRY14_15480 PF01638 HxlR-like helix-turn-helix JRY14_15535 PF00392 Bacterial regulatory proteins, gntR family JRY14_15535 PF00155 Aminotransferase class I and II JRY14_15545 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JRY14_15545 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JRY14_15560 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_15560 PF00107 Zinc-binding dehydrogenase JRY14_15570 PF04239 Protein of unknown function (DUF421) JRY14_15575 PF08241 Methyltransferase domain JRY14_15585 PF08450 SMP-30/Gluconolactonase/LRE-like region JRY14_15595 PF01921 tRNA synthetases class I (K) JRY14_15600 PF07486 Cell Wall Hydrolase JRY14_15605 PF00561 alpha/beta hydrolase fold JRY14_15620 PF00072 Response regulator receiver domain JRY14_15620 PF00486 Transcriptional regulatory protein, C terminal JRY14_15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_15635 PF00005 ABC transporter JRY14_15635 PF12848 ABC transporter JRY14_15660 PF00005 ABC transporter JRY14_15665 PF02687 FtsX-like permease family JRY14_15700 PF00392 Bacterial regulatory proteins, gntR family JRY14_15700 PF00155 Aminotransferase class I and II JRY14_15705 PF01820 D-ala D-ala ligase N-terminus JRY14_15705 PF07478 D-ala D-ala ligase C-terminus JRY14_15710 PF03070 TENA/THI-4/PQQC family JRY14_15770 PF00067 Cytochrome P450 JRY14_15780 PF00132 Bacterial transferase hexapeptide (six repeats) JRY14_15785 PF07561 Domain of Unknown Function (DUF1540) JRY14_15795 PF00067 Cytochrome P450 JRY14_15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_15810 PF00512 His Kinase A (phospho-acceptor) domain JRY14_15810 PF00989 PAS fold JRY14_15810 PF13188 PAS domain JRY14_15810 PF13426 PAS domain JRY14_15815 PF03717 Penicillin-binding Protein dimerisation domain JRY14_15815 PF00905 Penicillin binding protein transpeptidase domain JRY14_15820 PF10502 Signal peptidase, peptidase S26 JRY14_15825 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JRY14_15830 PF01177 Asp/Glu/Hydantoin racemase JRY14_15835 PF07155 ECF-type riboflavin transporter, S component JRY14_15840 PF12558 ATP-binding cassette cobalt transporter JRY14_15840 PF00005 ABC transporter JRY14_15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_15855 PF00512 His Kinase A (phospho-acceptor) domain JRY14_15865 PF04229 GrpB protein JRY14_15870 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_15870 PF00107 Zinc-binding dehydrogenase JRY14_15875 PF01569 PAP2 superfamily JRY14_15880 PF00905 Penicillin binding protein transpeptidase domain JRY14_15880 PF03793 PASTA domain JRY14_15880 PF03717 Penicillin-binding Protein dimerisation domain JRY14_15930 PF01609 Transposase DDE domain JRY14_15940 PF07732 Multicopper oxidase JRY14_15940 PF07731 Multicopper oxidase JRY14_15940 PF00394 Multicopper oxidase JRY14_15950 PF13411 MerR HTH family regulatory protein JRY14_15950 PF07739 TipAS antibiotic-recognition domain JRY14_15970 PF03009 Glycerophosphoryl diester phosphodiesterase family JRY14_15990 PF13276 HTH-like domain JRY14_15990 PF13333 Integrase core domain JRY14_15990 PF00665 Integrase core domain JRY14_16005 PF00155 Aminotransferase class I and II JRY14_16005 PF00392 Bacterial regulatory proteins, gntR family JRY14_16010 PF00892 EamA-like transporter family JRY14_16015 PF01270 Glycosyl hydrolases family 8 JRY14_16020 PF01156 Inosine-uridine preferring nucleoside hydrolase JRY14_16035 PF00293 NUDIX domain JRY14_16035 PF13344 Haloacid dehalogenase-like hydrolase JRY14_16045 PF00144 Beta-lactamase JRY14_16055 PF07690 Major Facilitator Superfamily JRY14_16065 PF00293 NUDIX domain JRY14_16065 PF09297 NADH pyrophosphatase zinc ribbon domain JRY14_16070 PF02768 DNA polymerase III beta subunit, C-terminal domain JRY14_16070 PF02767 DNA polymerase III beta subunit, central domain JRY14_16070 PF00712 DNA polymerase III beta subunit, N-terminal domain JRY14_16080 PF12706 Beta-lactamase superfamily domain JRY14_16090 PF09234 Domain of unknown function (DUF1963) JRY14_16110 PF01734 Patatin-like phospholipase JRY14_16115 PF08000 Bacterial PH domain JRY14_16125 PF12867 DinB superfamily JRY14_16140 PF02673 Bacitracin resistance protein BacA JRY14_16150 PF01541 GIY-YIG catalytic domain JRY14_16185 PF01609 Transposase DDE domain JRY14_16190 PF01609 Transposase DDE domain JRY14_16200 PF01266 FAD dependent oxidoreductase JRY14_16230 PF00144 Beta-lactamase JRY14_16235 PF13419 Haloacid dehalogenase-like hydrolase JRY14_16240 PF00072 Response regulator receiver domain JRY14_16240 PF00486 Transcriptional regulatory protein, C terminal JRY14_16245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_16245 PF00512 His Kinase A (phospho-acceptor) domain JRY14_16245 PF16736 Single Cache-like JRY14_16245 PF00989 PAS fold JRY14_16260 PF00005 ABC transporter JRY14_16265 PF02687 FtsX-like permease family JRY14_16265 PF12704 MacB-like periplasmic core domain JRY14_16280 PF00665 Integrase core domain JRY14_16285 PF01695 IstB-like ATP binding protein JRY14_16295 PF00282 Pyridoxal-dependent decarboxylase conserved domain JRY14_16300 PF00550 Phosphopantetheine attachment site JRY14_16300 PF00668 Condensation domain JRY14_16300 PF13193 AMP-binding enzyme C-terminal domain JRY14_16300 PF00501 AMP-binding enzyme JRY14_16315 PF02868 Thermolysin metallopeptidase, alpha-helical domain JRY14_16315 PF01447 Thermolysin metallopeptidase, catalytic domain JRY14_16315 PF07504 Fungalysin/Thermolysin Propeptide Motif JRY14_16315 PF03413 Peptidase propeptide and YPEB domain JRY14_16320 PF02872 5'-nucleotidase, C-terminal domain JRY14_16320 PF00149 Calcineurin-like phosphoesterase JRY14_16335 PF00344 SecY translocase JRY14_16340 PF00892 EamA-like transporter family JRY14_16345 PF00392 Bacterial regulatory proteins, gntR family JRY14_16345 PF00155 Aminotransferase class I and II JRY14_16350 PF00561 alpha/beta hydrolase fold JRY14_16370 PF01609 Transposase DDE domain JRY14_16380 PF06081 Aromatic acid exporter family member 1 JRY14_16380 PF06081 Aromatic acid exporter family member 1 JRY14_16395 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JRY14_16400 PF03413 Peptidase propeptide and YPEB domain JRY14_16400 PF14620 YpeB sporulation JRY14_16405 PF01471 Putative peptidoglycan binding domain JRY14_16405 PF07486 Cell Wall Hydrolase JRY14_16440 PF03301 Tryptophan 2,3-dioxygenase JRY14_16445 PF01609 Transposase DDE domain JRY14_16450 PF04199 Putative cyclase JRY14_16455 PF00266 Aminotransferase class-V JRY14_16460 PF00440 Bacterial regulatory proteins, tetR family JRY14_16460 PF08359 YsiA-like protein, C-terminal region JRY14_16485 PF00158 Sigma-54 interaction domain JRY14_16485 PF01590 GAF domain JRY14_16485 PF02954 Bacterial regulatory protein, Fis family JRY14_16500 PF13302 Acetyltransferase (GNAT) domain JRY14_16505 PF00455 DeoR C terminal sensor domain JRY14_16505 PF08220 DeoR-like helix-turn-helix domain JRY14_16520 PF02082 Transcriptional regulator JRY14_16535 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_16535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JRY14_16540 PF02817 e3 binding domain JRY14_16540 PF00364 Biotin-requiring enzyme JRY14_16540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JRY14_16545 PF02780 Transketolase, C-terminal domain JRY14_16545 PF02779 Transketolase, pyrimidine binding domain JRY14_16550 PF00676 Dehydrogenase E1 component JRY14_16560 PF00106 short chain dehydrogenase JRY14_16565 PF04229 GrpB protein JRY14_16565 PF13673 Acetyltransferase (GNAT) domain JRY14_16605 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_16610 PF00005 ABC transporter JRY14_16610 PF00571 CBS domain JRY14_16615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JRY14_16620 PF00574 Clp protease JRY14_16635 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JRY14_16640 PF13673 Acetyltransferase (GNAT) domain JRY14_16645 PF18416 N-acetylglucosamine binding protein domain 2 JRY14_16645 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JRY14_16650 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JRY14_16655 PF03781 Sulfatase-modifying factor enzyme 1 JRY14_16670 PF10990 Protein of unknown function (DUF2809) JRY14_16675 PF08241 Methyltransferase domain JRY14_16680 PF04237 YjbR JRY14_16720 PF00583 Acetyltransferase (GNAT) family JRY14_16725 PF13538 UvrD-like helicase C-terminal domain JRY14_16740 PF00570 HRDC domain JRY14_16740 PF16124 RecQ zinc-binding JRY14_16740 PF00270 DEAD/DEAH box helicase JRY14_16740 PF00271 Helicase conserved C-terminal domain JRY14_16740 PF09382 RQC domain JRY14_16780 PF13333 Integrase core domain JRY14_16780 PF00665 Integrase core domain JRY14_16780 PF13276 HTH-like domain JRY14_16785 PF12123 N-acetylmuramoyl-l-alanine amidase JRY14_16785 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_16805 PF01368 DHH family JRY14_16805 PF02833 DHHA2 domain JRY14_16810 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JRY14_16810 PF18416 N-acetylglucosamine binding protein domain 2 JRY14_16825 PF03193 RsgA GTPase JRY14_16830 PF02627 Carboxymuconolactone decarboxylase family JRY14_16835 PF01235 Sodium:alanine symporter family JRY14_16840 PF00171 Aldehyde dehydrogenase family JRY14_16845 PF00701 Dihydrodipicolinate synthetase family JRY14_16850 PF05544 Proline racemase JRY14_16855 PF05544 Proline racemase JRY14_16860 PF01266 FAD dependent oxidoreductase JRY14_16865 PF13188 PAS domain JRY14_16865 PF02954 Bacterial regulatory protein, Fis family JRY14_16865 PF00158 Sigma-54 interaction domain JRY14_16870 PF04324 BFD-like [2Fe-2S] binding domain JRY14_16870 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_16880 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_16880 PF04324 BFD-like [2Fe-2S] binding domain JRY14_16900 PF08876 Domain of unknown function (DUF1836) JRY14_16905 PF09335 SNARE associated Golgi protein JRY14_16915 PF04914 DltD protein JRY14_16925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_16930 PF00877 NlpC/P60 family JRY14_16930 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JRY14_16940 PF13378 Enolase C-terminal domain-like JRY14_16940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JRY14_16955 PF00248 Aldo/keto reductase family JRY14_16960 PF01965 DJ-1/PfpI family JRY14_16990 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JRY14_16990 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JRY14_17000 PF00672 HAMP domain JRY14_17000 PF00512 His Kinase A (phospho-acceptor) domain JRY14_17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_17005 PF00486 Transcriptional regulatory protein, C terminal JRY14_17005 PF00072 Response regulator receiver domain JRY14_17025 PF13419 Haloacid dehalogenase-like hydrolase JRY14_17030 PF01048 Phosphorylase superfamily JRY14_17035 PF03808 Glycosyl transferase WecB/TagA/CpsF family JRY14_17040 PF08439 Oligopeptidase F JRY14_17040 PF01432 Peptidase family M3 JRY14_17045 PF02645 Uncharacterised protein, DegV family COG1307 JRY14_17050 PF07552 Spore Coat Protein X and V domain JRY14_17085 PF07690 Major Facilitator Superfamily JRY14_17095 PF04519 Polymer-forming cytoskeletal JRY14_17100 PF13171 Protein of unknown function (DUF4004) JRY14_17105 PF12793 Sugar transport-related sRNA regulator N-term JRY14_17105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_17110 PF07690 Major Facilitator Superfamily JRY14_17130 PF04226 Transglycosylase associated protein JRY14_17145 PF08241 Methyltransferase domain JRY14_17180 PF00155 Aminotransferase class I and II JRY14_17185 PF07977 FabA-like domain JRY14_17235 PF01594 AI-2E family transporter JRY14_17245 PF00296 Luciferase-like monooxygenase JRY14_17250 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_17255 PF09084 NMT1/THI5 like JRY14_17260 PF00005 ABC transporter JRY14_17295 PF02522 Aminoglycoside 3-N-acetyltransferase JRY14_17320 PF12867 DinB superfamily JRY14_17340 PF08713 DNA alkylation repair enzyme JRY14_17345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_17355 PF01522 Polysaccharide deacetylase JRY14_17365 PF03741 Integral membrane protein TerC family JRY14_17370 PF00884 Sulfatase JRY14_17375 PF12848 ABC transporter JRY14_17375 PF00005 ABC transporter JRY14_17380 PF03176 MMPL family JRY14_17385 PF16295 Tetracyclin repressor-like, C-terminal domain JRY14_17385 PF00440 Bacterial regulatory proteins, tetR family JRY14_17395 PF02371 Transposase IS116/IS110/IS902 family JRY14_17395 PF01548 Transposase JRY14_17405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JRY14_17410 PF01842 ACT domain JRY14_17410 PF02153 Prephenate dehydrogenase JRY14_17415 PF00155 Aminotransferase class I and II JRY14_17420 PF01264 Chorismate synthase JRY14_17425 PF01817 Chorismate mutase type II JRY14_17425 PF00793 DAHP synthetase I family JRY14_17445 PF01636 Phosphotransferase enzyme family JRY14_17470 PF06725 3D domain JRY14_17470 PF01476 LysM domain JRY14_17480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_17485 PF08031 Berberine and berberine like JRY14_17485 PF01565 FAD binding domain JRY14_17510 PF06039 Malate:quinone oxidoreductase (Mqo) JRY14_17515 PF13407 Periplasmic binding protein domain JRY14_17520 PF02653 Branched-chain amino acid transport system / permease component JRY14_17525 PF02653 Branched-chain amino acid transport system / permease component JRY14_17530 PF00005 ABC transporter JRY14_17535 PF04198 Putative sugar-binding domain JRY14_17535 PF00325 Bacterial regulatory proteins, crp family JRY14_17540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JRY14_17540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JRY14_17550 PF01791 DeoC/LacD family aldolase JRY14_17560 PF03992 Antibiotic biosynthesis monooxygenase JRY14_17580 PF07662 Na+ dependent nucleoside transporter C-terminus JRY14_17580 PF01773 Na+ dependent nucleoside transporter N-terminus JRY14_17585 PF00171 Aldehyde dehydrogenase family JRY14_17590 PF00696 Amino acid kinase family JRY14_17590 PF01472 PUA domain JRY14_17595 PF03807 NADP oxidoreductase coenzyme F420-dependent JRY14_17595 PF14748 Pyrroline-5-carboxylate reductase dimerisation JRY14_17600 PF01546 Peptidase family M20/M25/M40 JRY14_17605 PF09339 IclR helix-turn-helix domain JRY14_17605 PF01614 Bacterial transcriptional regulator JRY14_17610 PF00324 Amino acid permease JRY14_17625 PF01609 Transposase DDE domain JRY14_17640 PF01695 IstB-like ATP binding protein JRY14_17645 PF00665 Integrase core domain JRY14_17655 PF05547 Immune inhibitor A peptidase M6 JRY14_17660 PF04294 VanW like protein JRY14_17665 PF00245 Alkaline phosphatase JRY14_17670 PF11188 Protein of unknown function (DUF2975) JRY14_17675 PF13443 Cro/C1-type HTH DNA-binding domain JRY14_17700 PF13302 Acetyltransferase (GNAT) domain JRY14_17705 PF12681 Glyoxalase-like domain JRY14_17730 PF07726 ATPase family associated with various cellular activities (AAA) JRY14_17730 PF17863 AAA lid domain JRY14_17745 PF07690 Major Facilitator Superfamily JRY14_17755 PF00535 Glycosyl transferase family 2 JRY14_17770 PF00535 Glycosyl transferase family 2 JRY14_17775 PF00535 Glycosyl transferase family 2 JRY14_17785 PF00202 Aminotransferase class-III JRY14_17790 PF00199 Catalase JRY14_17790 PF06628 Catalase-related immune-responsive JRY14_17810 PF13382 Adenine deaminase C-terminal domain JRY14_17810 PF01979 Amidohydrolase family JRY14_17815 PF00144 Beta-lactamase JRY14_17835 PF07726 ATPase family associated with various cellular activities (AAA) JRY14_17835 PF17863 AAA lid domain JRY14_17880 PF14436 Bacterial EndoU nuclease JRY14_17880 PF04740 LXG domain of WXG superfamily JRY14_17900 PF00881 Nitroreductase family JRY14_17905 PF01047 MarR family JRY14_17910 PF00679 Elongation factor G C-terminus JRY14_17910 PF14492 Elongation Factor G, domain II JRY14_17910 PF03764 Elongation factor G, domain IV JRY14_17910 PF00009 Elongation factor Tu GTP binding domain JRY14_17925 PF00293 NUDIX domain JRY14_17930 PF05406 WGR domain JRY14_17940 PF16363 GDP-mannose 4,6 dehydratase JRY14_17950 PF12833 Helix-turn-helix domain JRY14_17955 PF00583 Acetyltransferase (GNAT) family JRY14_17970 PF00892 EamA-like transporter family JRY14_17975 PF00155 Aminotransferase class I and II JRY14_17975 PF00392 Bacterial regulatory proteins, gntR family JRY14_17980 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JRY14_17985 PF13031 Protein of unknown function (DUF3892) JRY14_18015 PF01925 Sulfite exporter TauE/SafE JRY14_18030 PF00324 Amino acid permease JRY14_18040 PF08713 DNA alkylation repair enzyme JRY14_18055 PF00293 NUDIX domain JRY14_18060 PF04989 Cephalosporin hydroxylase JRY14_18065 PF10502 Signal peptidase, peptidase S26 JRY14_18070 PF03717 Penicillin-binding Protein dimerisation domain JRY14_18070 PF00905 Penicillin binding protein transpeptidase domain JRY14_18075 PF02146 Sir2 family JRY14_18080 PF01470 Pyroglutamyl peptidase JRY14_18095 PF01548 Transposase JRY14_18095 PF02371 Transposase IS116/IS110/IS902 family JRY14_18100 PF03746 LamB/YcsF family JRY14_18105 PF02626 Carboxyltransferase domain, subdomain A and B JRY14_18110 PF02682 Carboxyltransferase domain, subdomain C and D JRY14_18115 PF01614 Bacterial transcriptional regulator JRY14_18115 PF09339 IclR helix-turn-helix domain JRY14_18120 PF10502 Signal peptidase, peptidase S26 JRY14_18125 PF03932 CutC family JRY14_18145 PF02770 Acyl-CoA dehydrogenase, middle domain JRY14_18145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JRY14_18145 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JRY14_18165 PF13276 HTH-like domain JRY14_18165 PF00665 Integrase core domain JRY14_18165 PF13333 Integrase core domain JRY14_18170 PF01695 IstB-like ATP binding protein JRY14_18175 PF00665 Integrase core domain JRY14_18180 PF13276 HTH-like domain JRY14_18180 PF00665 Integrase core domain JRY14_18180 PF13333 Integrase core domain JRY14_18185 PF07670 Nucleoside recognition JRY14_18200 PF10903 Protein of unknown function (DUF2691) JRY14_18205 PF02915 Rubrerythrin JRY14_18225 PF00665 Integrase core domain JRY14_18225 PF13276 HTH-like domain JRY14_18225 PF13333 Integrase core domain JRY14_18235 PF00440 Bacterial regulatory proteins, tetR family JRY14_18240 PF05547 Immune inhibitor A peptidase M6 JRY14_18245 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JRY14_18245 PF00391 PEP-utilising enzyme, mobile domain JRY14_18250 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JRY14_18255 PF00753 Metallo-beta-lactamase superfamily JRY14_18260 PF07875 Coat F domain JRY14_18265 PF08892 YqcI/YcgG family JRY14_18270 PF01810 LysE type translocator JRY14_18275 PF00324 Amino acid permease JRY14_18285 PF00269 Small, acid-soluble spore proteins, alpha/beta type JRY14_18290 PF10710 Protein of unknown function (DUF2512) JRY14_18295 PF11553 Protein of unknown function (DUF3231) JRY14_18300 PF00269 Small, acid-soluble spore proteins, alpha/beta type JRY14_18305 PF13823 Alcohol dehydrogenase GroES-associated JRY14_18305 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_18305 PF00107 Zinc-binding dehydrogenase JRY14_18315 PF10415 Fumarase C C-terminus JRY14_18315 PF00206 Lyase JRY14_18320 PF00710 Asparaginase, N-terminal JRY14_18320 PF17763 Glutaminase/Asparaginase C-terminal domain JRY14_18325 PF01381 Helix-turn-helix JRY14_18360 PF03845 Spore germination protein JRY14_18365 PF03323 Bacillus/Clostridium GerA spore germination protein JRY14_18370 PF00989 PAS fold JRY14_18370 PF13188 PAS domain JRY14_18370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_18370 PF13426 PAS domain JRY14_18370 PF00512 His Kinase A (phospho-acceptor) domain JRY14_18375 PF05791 Bacillus haemolytic enterotoxin (HBL) JRY14_18380 PF05791 Bacillus haemolytic enterotoxin (HBL) JRY14_18395 PF12833 Helix-turn-helix domain JRY14_18395 PF17853 GGDEF-like domain JRY14_18405 PF00269 Small, acid-soluble spore proteins, alpha/beta type JRY14_18410 PF12826 Helix-hairpin-helix motif JRY14_18410 PF08459 UvrC Helix-hairpin-helix N-terminal JRY14_18410 PF01541 GIY-YIG catalytic domain JRY14_18410 PF02151 UvrB/uvrC motif JRY14_18415 PF13520 Amino acid permease JRY14_18420 PF03807 NADP oxidoreductase coenzyme F420-dependent JRY14_18420 PF14748 Pyrroline-5-carboxylate reductase dimerisation JRY14_18425 PF13564 DoxX-like family JRY14_18430 PF03949 Malic enzyme, NAD binding domain JRY14_18430 PF00390 Malic enzyme, N-terminal domain JRY14_18440 PF00665 Integrase core domain JRY14_18445 PF01695 IstB-like ATP binding protein JRY14_18455 PF05504 Spore germination B3/ GerAC like, C-terminal JRY14_18460 PF03845 Spore germination protein JRY14_18465 PF03323 Bacillus/Clostridium GerA spore germination protein JRY14_18470 PF00072 Response regulator receiver domain JRY14_18470 PF08664 YcbB domain JRY14_18475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_18480 PF04960 Glutaminase JRY14_18485 PF01235 Sodium:alanine symporter family JRY14_18495 PF00067 Cytochrome P450 JRY14_18500 PF00144 Beta-lactamase JRY14_18510 PF00440 Bacterial regulatory proteins, tetR family JRY14_18510 PF18665 Tetracyclin repressor-like, C-terminal domain JRY14_18515 PF07690 Major Facilitator Superfamily JRY14_18520 PF00440 Bacterial regulatory proteins, tetR family JRY14_18530 PF01037 Lrp/AsnC ligand binding domain JRY14_18545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_18555 PF01609 Transposase DDE domain JRY14_18560 PF00144 Beta-lactamase JRY14_18570 PF08803 Putative mono-oxygenase ydhR JRY14_18580 PF12802 MarR family JRY14_18595 PF02371 Transposase IS116/IS110/IS902 family JRY14_18595 PF01548 Transposase JRY14_18630 PF00196 Bacterial regulatory proteins, luxR family JRY14_18630 PF00072 Response regulator receiver domain JRY14_18645 PF00067 Cytochrome P450 JRY14_18645 PF00258 Flavodoxin JRY14_18645 PF00667 FAD binding domain JRY14_18645 PF00175 Oxidoreductase NAD-binding domain JRY14_18650 PF07690 Major Facilitator Superfamily JRY14_18660 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_18670 PF01139 tRNA-splicing ligase RtcB JRY14_18680 PF04072 Leucine carboxyl methyltransferase JRY14_18700 PF00005 ABC transporter JRY14_18705 PF02687 FtsX-like permease family JRY14_18725 PF00672 HAMP domain JRY14_18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_18725 PF00512 His Kinase A (phospho-acceptor) domain JRY14_18730 PF00486 Transcriptional regulatory protein, C terminal JRY14_18730 PF00072 Response regulator receiver domain JRY14_18740 PF01047 MarR family JRY14_18745 PF00583 Acetyltransferase (GNAT) family JRY14_18750 PF04299 Putative FMN-binding domain JRY14_18755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_18755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_18790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JRY14_18790 PF01842 ACT domain JRY14_18790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JRY14_18795 PF00266 Aminotransferase class-V JRY14_18820 PF01804 Penicillin amidase JRY14_18835 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_18835 PF01476 LysM domain JRY14_18835 PF01471 Putative peptidoglycan binding domain JRY14_18940 PF02557 D-alanyl-D-alanine carboxypeptidase JRY14_18945 PF09587 Bacterial capsule synthesis protein PGA_cap JRY14_18950 PF14044 NETI protein JRY14_18955 PF07690 Major Facilitator Superfamily JRY14_18965 PF12697 Alpha/beta hydrolase family JRY14_18970 PF01047 MarR family JRY14_18975 PF07690 Major Facilitator Superfamily JRY14_18985 PF12679 ABC-2 family transporter protein JRY14_18990 PF13732 Domain of unknown function (DUF4162) JRY14_18990 PF00005 ABC transporter JRY14_18995 PF13396 Phospholipase_D-nuclease N-terminal JRY14_19010 PF02667 Short chain fatty acid transporter JRY14_19020 PF02525 Flavodoxin-like fold JRY14_19040 PF14256 YwiC-like protein JRY14_19050 PF00005 ABC transporter JRY14_19070 PF03737 Aldolase/RraA JRY14_19075 PF03606 C4-dicarboxylate anaerobic carrier JRY14_19080 PF04231 Endonuclease I JRY14_19090 PF03129 Anticodon binding domain JRY14_19090 PF13393 Histidyl-tRNA synthetase JRY14_19105 PF01638 HxlR-like helix-turn-helix JRY14_19110 PF00881 Nitroreductase family JRY14_19120 PF00391 PEP-utilising enzyme, mobile domain JRY14_19120 PF00224 Pyruvate kinase, barrel domain JRY14_19120 PF02887 Pyruvate kinase, alpha/beta domain JRY14_19150 PF00005 ABC transporter JRY14_19175 PF13419 Haloacid dehalogenase-like hydrolase JRY14_19180 PF13350 Tyrosine phosphatase family JRY14_19205 PF00579 tRNA synthetases class I (W and Y) JRY14_19210 PF13288 DXP reductoisomerase C-terminal domain JRY14_19210 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JRY14_19210 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JRY14_19215 PF01594 AI-2E family transporter JRY14_19245 PF08003 Protein of unknown function (DUF1698) JRY14_19275 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_19285 PF00571 CBS domain JRY14_19285 PF01595 Cyclin M transmembrane N-terminal domain JRY14_19285 PF03471 Transporter associated domain JRY14_19290 PF13411 MerR HTH family regulatory protein JRY14_19300 PF00483 Nucleotidyl transferase JRY14_19305 PF16363 GDP-mannose 4,6 dehydratase JRY14_19310 PF08484 C-methyltransferase C-terminal domain JRY14_19310 PF08421 Putative zinc binding domain JRY14_19315 PF01370 NAD dependent epimerase/dehydratase family JRY14_19330 PF00892 EamA-like transporter family JRY14_19335 PF00805 Pentapeptide repeats (8 copies) JRY14_19340 PF06906 Protein of unknown function (DUF1272) JRY14_19345 PF10282 Lactonase, 7-bladed beta-propeller JRY14_19350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JRY14_19350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JRY14_19355 PF02447 GntP family permease JRY14_19365 PF00923 Transaldolase/Fructose-6-phosphate aldolase JRY14_19370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JRY14_19370 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JRY14_19375 PF00456 Transketolase, thiamine diphosphate binding domain JRY14_19375 PF02779 Transketolase, pyrimidine binding domain JRY14_19375 PF02780 Transketolase, C-terminal domain JRY14_19380 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JRY14_19380 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JRY14_19385 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JRY14_19385 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JRY14_19390 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_19390 PF00107 Zinc-binding dehydrogenase JRY14_19395 PF00296 Luciferase-like monooxygenase JRY14_19400 PF08240 Alcohol dehydrogenase GroES-like domain JRY14_19400 PF00550 Phosphopantetheine attachment site JRY14_19400 PF00698 Acyl transferase domain JRY14_19400 PF00107 Zinc-binding dehydrogenase JRY14_19400 PF16197 Ketoacyl-synthetase C-terminal extension JRY14_19400 PF00109 Beta-ketoacyl synthase, N-terminal domain JRY14_19400 PF02801 Beta-ketoacyl synthase, C-terminal domain JRY14_19400 PF08659 KR domain JRY14_19400 PF14765 Polyketide synthase dehydratase JRY14_19405 PF00106 short chain dehydrogenase JRY14_19410 PF07504 Fungalysin/Thermolysin Propeptide Motif JRY14_19410 PF03413 Peptidase propeptide and YPEB domain JRY14_19410 PF01447 Thermolysin metallopeptidase, catalytic domain JRY14_19410 PF02868 Thermolysin metallopeptidase, alpha-helical domain JRY14_19420 PF12729 Four helix bundle sensory module for signal transduction JRY14_19420 PF00672 HAMP domain JRY14_19420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_19425 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) JRY14_19430 PF01872 RibD C-terminal domain JRY14_19430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JRY14_19435 PF00925 GTP cyclohydrolase II JRY14_19435 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JRY14_19440 PF01638 HxlR-like helix-turn-helix JRY14_19455 PF00248 Aldo/keto reductase family JRY14_19460 PF07690 Major Facilitator Superfamily JRY14_19470 PF03928 Haem-degrading JRY14_19485 PF03831 PhnA domain JRY14_19485 PF08274 PhnA Zinc-Ribbon JRY14_19490 PF01740 STAS domain JRY14_19490 PF00916 Sulfate permease family JRY14_19530 PF01548 Transposase JRY14_19530 PF02371 Transposase IS116/IS110/IS902 family JRY14_19540 PF03960 ArsC family JRY14_19545 PF01638 HxlR-like helix-turn-helix JRY14_19550 PF07702 UTRA domain JRY14_19550 PF00392 Bacterial regulatory proteins, gntR family JRY14_19555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JRY14_19555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JRY14_19565 PF01638 HxlR-like helix-turn-helix JRY14_19570 PF01638 HxlR-like helix-turn-helix JRY14_19575 PF00248 Aldo/keto reductase family JRY14_19590 PF01609 Transposase DDE domain JRY14_19630 PF02567 Phenazine biosynthesis-like protein JRY14_19650 PF13302 Acetyltransferase (GNAT) domain JRY14_19660 PF13193 AMP-binding enzyme C-terminal domain JRY14_19660 PF00501 AMP-binding enzyme JRY14_19665 PF02525 Flavodoxin-like fold JRY14_19670 PF01638 HxlR-like helix-turn-helix JRY14_19685 PF01548 Transposase JRY14_19685 PF02371 Transposase IS116/IS110/IS902 family JRY14_19690 PF13333 Integrase core domain JRY14_19690 PF00665 Integrase core domain JRY14_19690 PF13276 HTH-like domain JRY14_19695 PF01022 Bacterial regulatory protein, arsR family JRY14_19700 PF01522 Polysaccharide deacetylase JRY14_19705 PF12791 Anti-sigma factor N-terminus JRY14_19710 PF04542 Sigma-70 region 2 JRY14_19715 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JRY14_19715 PF00535 Glycosyl transferase family 2 JRY14_19730 PF01609 Transposase DDE domain JRY14_19735 PF06961 Protein of unknown function (DUF1294) JRY14_19750 PF10609 NUBPL iron-transfer P-loop NTPase JRY14_19760 PF02391 MoaE protein JRY14_19765 PF03453 MoeA N-terminal region (domain I and II) JRY14_19765 PF00994 Probable molybdopterin binding domain JRY14_19765 PF03454 MoeA C-terminal region (domain IV) JRY14_19770 PF00899 ThiF family JRY14_19775 PF01226 Formate/nitrite transporter JRY14_19780 PF04055 Radical SAM superfamily JRY14_19780 PF06463 Molybdenum Cofactor Synthesis C JRY14_19785 PF02634 FdhD/NarQ family JRY14_19790 PF10057 Uncharacterized conserved protein (DUF2294) JRY14_19795 PF07849 Protein of unknown function (DUF1641) JRY14_19800 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JRY14_19800 PF00037 4Fe-4S binding domain JRY14_19800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JRY14_19800 PF00384 Molybdopterin oxidoreductase JRY14_19800 PF01568 Molydopterin dinucleotide binding domain JRY14_19805 PF03323 Bacillus/Clostridium GerA spore germination protein JRY14_19820 PF13520 Amino acid permease JRY14_19855 PF08241 Methyltransferase domain JRY14_19860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_19865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_19870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JRY14_19875 PF00375 Sodium:dicarboxylate symporter family JRY14_19880 PF03816 Cell envelope-related transcriptional attenuator domain JRY14_19890 PF08281 Sigma-70, region 4 JRY14_19890 PF04542 Sigma-70 region 2 JRY14_19895 PF01609 Transposase DDE domain JRY14_19905 PF00005 ABC transporter JRY14_19905 PF13732 Domain of unknown function (DUF4162) JRY14_19915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JRY14_19915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JRY14_19920 PF00521 DNA gyrase/topoisomerase IV, subunit A JRY14_19920 PF03989 DNA gyrase C-terminal domain, beta-propeller JRY14_19925 PF00986 DNA gyrase B subunit, carboxyl terminus JRY14_19925 PF01751 Toprim domain JRY14_19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_19925 PF00204 DNA gyrase B JRY14_19930 PF13380 CoA binding domain JRY14_19935 PF13180 PDZ domain JRY14_19940 PF00072 Response regulator receiver domain JRY14_19940 PF00486 Transcriptional regulatory protein, C terminal JRY14_19945 PF04055 Radical SAM superfamily JRY14_19950 PF13597 Anaerobic ribonucleoside-triphosphate reductase JRY14_19950 PF03477 ATP cone domain JRY14_19955 PF02660 Glycerol-3-phosphate acyltransferase JRY14_19960 PF01521 Iron-sulphur cluster biosynthesis JRY14_19965 PF01609 Transposase DDE domain JRY14_19970 PF03061 Thioesterase superfamily JRY14_19975 PF01476 LysM domain JRY14_19975 PF00704 Glycosyl hydrolases family 18 JRY14_19985 PF08177 Small acid-soluble spore protein N family JRY14_19990 PF13040 Fur-regulated basic protein B JRY14_19995 PF07733 Bacterial DNA polymerase III alpha NTPase domain JRY14_19995 PF01336 OB-fold nucleic acid binding domain JRY14_19995 PF00929 Exonuclease JRY14_19995 PF02811 PHP domain JRY14_19995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JRY14_19995 PF11490 DNA polymerase III polC-type N-terminus II JRY14_19995 PF14579 Helix-hairpin-helix motif JRY14_20000 PF00578 AhpC/TSA family JRY14_20010 PF00005 ABC transporter JRY14_20010 PF00664 ABC transporter transmembrane region JRY14_20015 PF00330 Aconitase family (aconitate hydratase) JRY14_20015 PF00694 Aconitase C-terminal domain JRY14_20025 PF01522 Polysaccharide deacetylase JRY14_20045 PF07690 Major Facilitator Superfamily JRY14_20055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JRY14_20055 PF01411 tRNA synthetases class II (A) JRY14_20055 PF02272 DHHA1 domain JRY14_20060 PF13344 Haloacid dehalogenase-like hydrolase JRY14_20060 PF00293 NUDIX domain JRY14_20070 PF02803 Thiolase, C-terminal domain JRY14_20070 PF00108 Thiolase, N-terminal domain JRY14_20075 PF13193 AMP-binding enzyme C-terminal domain JRY14_20075 PF00501 AMP-binding enzyme JRY14_20080 PF02632 BioY family JRY14_20085 PF13193 AMP-binding enzyme C-terminal domain JRY14_20085 PF00501 AMP-binding enzyme JRY14_20110 PF05532 CsbD-like JRY14_20130 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_20130 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_20140 PF00512 His Kinase A (phospho-acceptor) domain JRY14_20140 PF13426 PAS domain JRY14_20140 PF13188 PAS domain JRY14_20140 PF00989 PAS fold JRY14_20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_20145 PF01738 Dienelactone hydrolase family JRY14_20150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_20155 PF00474 Sodium:solute symporter family JRY14_20165 PF01645 Conserved region in glutamate synthase JRY14_20175 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_20185 PF02559 CarD-like/TRCF domain JRY14_20190 PF00491 Arginase family JRY14_20195 PF01979 Amidohydrolase family JRY14_20200 PF01175 Urocanase Rossmann-like domain JRY14_20200 PF17392 Urocanase C-terminal domain JRY14_20200 PF17391 Urocanase N-terminal domain JRY14_20205 PF00221 Aromatic amino acid lyase JRY14_20210 PF09021 HutP JRY14_20235 PF11084 Protein of unknown function (DUF2621) JRY14_20240 PF07301 Protein of unknown function (DUF1453) JRY14_20245 PF02683 Cytochrome C biogenesis protein transmembrane region JRY14_20255 PF01546 Peptidase family M20/M25/M40 JRY14_20255 PF07687 Peptidase dimerisation domain JRY14_20280 PF03466 LysR substrate binding domain JRY14_20280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_20285 PF03788 LrgA family JRY14_20290 PF04172 LrgB-like family JRY14_20295 PF13344 Haloacid dehalogenase-like hydrolase JRY14_20295 PF00293 NUDIX domain JRY14_20305 PF01925 Sulfite exporter TauE/SafE JRY14_20325 PF08239 Bacterial SH3 domain JRY14_20325 PF01183 Glycosyl hydrolases family 25 JRY14_20330 PF00664 ABC transporter transmembrane region JRY14_20330 PF00005 ABC transporter JRY14_20335 PF00005 ABC transporter JRY14_20335 PF00664 ABC transporter transmembrane region JRY14_20340 PF03672 Uncharacterised protein family (UPF0154) JRY14_20345 PF10747 Sporulation inhibitor of replication protein SirA JRY14_20350 PF00456 Transketolase, thiamine diphosphate binding domain JRY14_20350 PF02780 Transketolase, C-terminal domain JRY14_20350 PF02779 Transketolase, pyrimidine binding domain JRY14_20355 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_20360 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_20365 PF00005 ABC transporter JRY14_20385 PF00149 Calcineurin-like phosphoesterase JRY14_20385 PF02872 5'-nucleotidase, C-terminal domain JRY14_20390 PF05979 Bacterial protein of unknown function (DUF896) JRY14_20395 PF00239 Resolvase, N terminal domain JRY14_20400 PF01726 LexA DNA binding domain JRY14_20400 PF00717 Peptidase S24-like JRY14_20415 PF03551 Transcriptional regulator PadR-like family JRY14_20425 PF01471 Putative peptidoglycan binding domain JRY14_20425 PF01476 LysM domain JRY14_20425 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_20430 PF04225 Opacity-associated protein A LysM-like domain JRY14_20430 PF01551 Peptidase family M23 JRY14_20470 PF01726 LexA DNA binding domain JRY14_20470 PF00717 Peptidase S24-like JRY14_20475 PF00120 Glutamine synthetase, catalytic domain JRY14_20475 PF03951 Glutamine synthetase, beta-Grasp domain JRY14_20480 PF13411 MerR HTH family regulatory protein JRY14_20485 PF06838 Methionine gamma-lyase JRY14_20490 PF16360 GTP-binding GTPase Middle Region JRY14_20490 PF13167 GTP-binding GTPase N-terminal JRY14_20490 PF01926 50S ribosome-binding GTPase JRY14_20495 PF03458 UPF0126 domain JRY14_20505 PF00004 ATPase family associated with various cellular activities (AAA) JRY14_20505 PF17866 AAA lid domain JRY14_20525 PF17209 Hfq protein JRY14_20540 PF01476 LysM domain JRY14_20540 PF06725 3D domain JRY14_20545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JRY14_20545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JRY14_20550 PF00294 pfkB family carbohydrate kinase JRY14_20555 PF00455 DeoR C terminal sensor domain JRY14_20555 PF08220 DeoR-like helix-turn-helix domain JRY14_20560 PF00465 Iron-containing alcohol dehydrogenase JRY14_20565 PF04238 Protein of unknown function (DUF420) JRY14_20575 PF00324 Amino acid permease JRY14_20580 PF00704 Glycosyl hydrolases family 18 JRY14_20580 PF00041 Fibronectin type III domain JRY14_20585 PF10518 TAT (twin-arginine translocation) pathway signal sequence JRY14_20585 PF00149 Calcineurin-like phosphoesterase JRY14_20590 PF01226 Formate/nitrite transporter JRY14_20595 PF00216 Bacterial DNA-binding protein JRY14_20605 PF00403 Heavy-metal-associated domain JRY14_20610 PF00403 Heavy-metal-associated domain JRY14_20615 PF02583 Metal-sensitive transcriptional repressor JRY14_20625 PF00756 Putative esterase JRY14_20630 PF00005 ABC transporter JRY14_20635 PF01032 FecCD transport family JRY14_20640 PF01032 FecCD transport family JRY14_20645 PF01497 Periplasmic binding protein JRY14_20655 PF12833 Helix-turn-helix domain JRY14_20655 PF02805 Metal binding domain of Ada JRY14_20660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JRY14_20660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JRY14_20665 PF00730 HhH-GPD superfamily base excision DNA repair protein JRY14_20665 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain JRY14_20670 PF07687 Peptidase dimerisation domain JRY14_20670 PF01546 Peptidase family M20/M25/M40 JRY14_20685 PF00561 alpha/beta hydrolase fold JRY14_20690 PF00563 EAL domain JRY14_20690 PF00990 Diguanylate cyclase, GGDEF domain JRY14_20690 PF03707 Bacterial signalling protein N terminal repeat JRY14_20695 PF04101 Glycosyltransferase family 28 C-terminal domain JRY14_20695 PF03033 Glycosyltransferase family 28 N-terminal domain JRY14_20705 PF16363 GDP-mannose 4,6 dehydratase JRY14_20710 PF02719 Polysaccharide biosynthesis protein JRY14_20710 PF08485 Polysaccharide biosynthesis protein C-terminal JRY14_20725 PF10787 Uncharacterised protein from bacillus cereus group JRY14_20730 PF04172 LrgB-like family JRY14_20735 PF03788 LrgA family JRY14_20740 PF00392 Bacterial regulatory proteins, gntR family JRY14_20740 PF00155 Aminotransferase class I and II JRY14_20745 PF00561 alpha/beta hydrolase fold JRY14_20750 PF02585 GlcNAc-PI de-N-acetylase JRY14_20760 PF00388 Phosphatidylinositol-specific phospholipase C, X domain JRY14_20765 PF00082 Subtilase family JRY14_20770 PF07486 Cell Wall Hydrolase JRY14_20780 PF00884 Sulfatase JRY14_20785 PF00350 Dynamin family JRY14_20795 PF01119 DNA mismatch repair protein, C-terminal domain JRY14_20795 PF08676 MutL C terminal dimerisation domain JRY14_20800 PF05190 MutS family domain IV JRY14_20800 PF01624 MutS domain I JRY14_20800 PF00488 MutS domain V JRY14_20800 PF05192 MutS domain III JRY14_20800 PF05188 MutS domain II JRY14_20805 PF10628 Outer spore coat protein E (CotE) JRY14_20810 PF06133 Control of competence regulator ComK, YlbF/YmcA JRY14_20815 PF04055 Radical SAM superfamily JRY14_20815 PF01938 TRAM domain JRY14_20815 PF00919 Uncharacterized protein family UPF0004 JRY14_20820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JRY14_20825 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JRY14_20825 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JRY14_20825 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JRY14_20830 PF01244 Membrane dipeptidase (Peptidase family M19) JRY14_20835 PF04232 Stage V sporulation protein S (SpoVS) JRY14_20840 PF13277 YmdB-like protein JRY14_20845 PF00013 KH domain JRY14_20845 PF12072 Domain of unknown function (DUF3552) JRY14_20845 PF01966 HD domain JRY14_20850 PF00154 recA bacterial DNA recombination protein JRY14_20855 PF18146 Damage-inducible protein CinA KH domain JRY14_20855 PF00994 Probable molybdopterin binding domain JRY14_20855 PF02464 Competence-damaged protein JRY14_20860 PF01066 CDP-alcohol phosphatidyltransferase JRY14_20865 PF13464 Domain of unknown function (DUF4115) JRY14_20870 PF11868 Protein of unknown function (DUF3388) JRY14_20875 PF11588 Protein of unknown function (DUF3243) JRY14_20885 PF00675 Insulinase (Peptidase family M16) JRY14_20885 PF05193 Peptidase M16 inactive domain JRY14_20890 PF05193 Peptidase M16 inactive domain JRY14_20895 PF02653 Branched-chain amino acid transport system / permease component JRY14_20900 PF02653 Branched-chain amino acid transport system / permease component JRY14_20905 PF00005 ABC transporter JRY14_20910 PF02608 ABC transporter substrate-binding protein PnrA-like JRY14_20915 PF07702 UTRA domain JRY14_20915 PF00392 Bacterial regulatory proteins, gntR family JRY14_20925 PF17854 FtsK alpha domain JRY14_20925 PF09397 Ftsk gamma domain JRY14_20925 PF01580 FtsK/SpoIIIE family JRY14_20930 PF14035 YlzJ-like protein JRY14_20935 PF00574 Clp protease JRY14_20940 PF00753 Metallo-beta-lactamase superfamily JRY14_20940 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JRY14_20940 PF17770 Ribonuclease J C-terminal domain JRY14_20945 PF00701 Dihydrodipicolinate synthetase family JRY14_20950 PF00696 Amino acid kinase family JRY14_20950 PF13840 ACT domain JRY14_20955 PF01118 Semialdehyde dehydrogenase, NAD binding domain JRY14_20955 PF02774 Semialdehyde dehydrogenase, dimerisation domain JRY14_20960 PF02441 Flavoprotein JRY14_20965 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JRY14_20965 PF16924 Dipicolinate synthase subunit A N-terminal domain JRY14_20970 PF05239 PRC-barrel domain JRY14_20975 PF00675 Insulinase (Peptidase family M16) JRY14_20975 PF05193 Peptidase M16 inactive domain JRY14_20980 PF01522 Polysaccharide deacetylase JRY14_20985 PF00013 KH domain JRY14_20985 PF01138 3' exoribonuclease family, domain 1 JRY14_20985 PF03725 3' exoribonuclease family, domain 2 JRY14_20985 PF00575 S1 RNA binding domain JRY14_20985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JRY14_20990 PF00312 Ribosomal protein S15 JRY14_20995 PF01687 Riboflavin kinase JRY14_20995 PF06574 FAD synthetase JRY14_21000 PF01509 TruB family pseudouridylate synthase (N terminal domain) JRY14_21000 PF16198 tRNA pseudouridylate synthase B C-terminal domain JRY14_21005 PF02033 Ribosome-binding factor A JRY14_21010 PF04456 Protein of unknown function (DUF503) JRY14_21015 PF00009 Elongation factor Tu GTP binding domain JRY14_21015 PF11987 Translation-initiation factor 2 JRY14_21015 PF04760 Translation initiation factor IF-2, N-terminal region JRY14_21020 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JRY14_21025 PF04296 Protein of unknown function (DUF448) JRY14_21030 PF00575 S1 RNA binding domain JRY14_21030 PF13184 NusA-like KH domain JRY14_21030 PF08529 NusA N-terminal domain JRY14_21035 PF17384 RimP C-terminal SH3 domain JRY14_21035 PF02576 RimP N-terminal domain JRY14_21040 PF02811 PHP domain JRY14_21040 PF07733 Bacterial DNA polymerase III alpha NTPase domain JRY14_21040 PF00929 Exonuclease JRY14_21040 PF11490 DNA polymerase III polC-type N-terminus II JRY14_21040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JRY14_21040 PF14579 Helix-hairpin-helix motif JRY14_21040 PF14480 DNA polymerase III polC-type N-terminus I JRY14_21045 PF03129 Anticodon binding domain JRY14_21045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JRY14_21045 PF04073 Aminoacyl-tRNA editing domain JRY14_21050 PF17820 PDZ domain JRY14_21050 PF02163 Peptidase family M50 JRY14_21055 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JRY14_21055 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JRY14_21055 PF13288 DXP reductoisomerase C-terminal domain JRY14_21065 PF01255 Putative undecaprenyl diphosphate synthase JRY14_21070 PF01765 Ribosome recycling factor JRY14_21075 PF00696 Amino acid kinase family JRY14_21080 PF00889 Elongation factor TS JRY14_21085 PF00318 Ribosomal protein S2 JRY14_21090 PF08222 CodY helix-turn-helix domain JRY14_21090 PF06018 CodY GAF-like domain JRY14_21095 PF10431 C-terminal, D2-small domain, of ClpB protein JRY14_21095 PF00004 ATPase family associated with various cellular activities (AAA) JRY14_21095 PF07724 AAA domain (Cdc48 subfamily) JRY14_21100 PF00227 Proteasome subunit JRY14_21105 PF02899 Phage integrase, N-terminal SAM-like domain JRY14_21105 PF00589 Phage integrase family JRY14_21110 PF01134 Glucose inhibited division protein A JRY14_21115 PF01131 DNA topoisomerase JRY14_21115 PF01751 Toprim domain JRY14_21115 PF01396 Topoisomerase DNA binding C4 zinc finger JRY14_21120 PF02481 DNA recombination-mediator protein A JRY14_21125 PF02629 CoA binding domain JRY14_21125 PF00549 CoA-ligase JRY14_21130 PF00549 CoA-ligase JRY14_21130 PF08442 ATP-grasp domain JRY14_21135 PF01351 Ribonuclease HII JRY14_21140 PF01926 50S ribosome-binding GTPase JRY14_21145 PF10502 Signal peptidase, peptidase S26 JRY14_21150 PF01245 Ribosomal protein L19 JRY14_21155 PF01746 tRNA (Guanine-1)-methyltransferase JRY14_21160 PF05239 PRC-barrel domain JRY14_21160 PF01782 RimM N-terminal domain JRY14_21170 PF00886 Ribosomal protein S16 JRY14_21175 PF00448 SRP54-type protein, GTPase domain JRY14_21175 PF02881 SRP54-type protein, helical bundle domain JRY14_21175 PF02978 Signal peptide binding domain JRY14_21180 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JRY14_21185 PF00448 SRP54-type protein, GTPase domain JRY14_21185 PF02881 SRP54-type protein, helical bundle domain JRY14_21190 PF06470 SMC proteins Flexible Hinge Domain JRY14_21190 PF02463 RecF/RecN/SMC N terminal domain JRY14_21195 PF00035 Double-stranded RNA binding motif JRY14_21195 PF14622 Ribonuclease-III-like JRY14_21200 PF00550 Phosphopantetheine attachment site JRY14_21210 PF00698 Acyl transferase domain JRY14_21215 PF02504 Fatty acid synthesis protein JRY14_21220 PF03061 Thioesterase superfamily JRY14_21225 PF00270 DEAD/DEAH box helicase JRY14_21225 PF00271 Helicase conserved C-terminal domain JRY14_21225 PF17191 RecG wedge domain JRY14_21230 PF13684 Dihydroxyacetone kinase family JRY14_21230 PF02734 DAK2 domain JRY14_21235 PF03780 Asp23 family, cell envelope-related function JRY14_21240 PF00830 Ribosomal L28 family JRY14_21245 PF08183 Stage V sporulation protein family JRY14_21250 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JRY14_21250 PF04263 Thiamin pyrophosphokinase, catalytic domain JRY14_21255 PF00834 Ribulose-phosphate 3 epimerase family JRY14_21260 PF03193 RsgA GTPase JRY14_21260 PF16745 RsgA N-terminal domain JRY14_21265 PF03793 PASTA domain JRY14_21265 PF00069 Protein kinase domain JRY14_21275 PF04055 Radical SAM superfamily JRY14_21280 PF01189 16S rRNA methyltransferase RsmB/F JRY14_21280 PF01029 NusB family JRY14_21285 PF02911 Formyl transferase, C-terminal domain JRY14_21285 PF00551 Formyl transferase JRY14_21290 PF01327 Polypeptide deformylase JRY14_21295 PF00271 Helicase conserved C-terminal domain JRY14_21295 PF17764 3′ DNA-binding domain (3′BD) JRY14_21295 PF18074 Primosomal protein N C-terminal domain JRY14_21295 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JRY14_21295 PF04851 Type III restriction enzyme, res subunit JRY14_21300 PF04127 DNA / pantothenate metabolism flavoprotein JRY14_21300 PF02441 Flavoprotein JRY14_21305 PF01192 RNA polymerase Rpb6 JRY14_21310 PF00625 Guanylate kinase JRY14_21315 PF04025 Domain of unknown function (DUF370) JRY14_21320 PF08340 Domain of unknown function (DUF1732) JRY14_21320 PF03755 YicC-like family, N-terminal region JRY14_21325 PF00689 Cation transporting ATPase, C-terminus JRY14_21325 PF00690 Cation transporter/ATPase, N-terminus JRY14_21330 PF05670 NFACT protein RNA binding domain JRY14_21335 PF01321 Creatinase/Prolidase N-terminal domain JRY14_21335 PF00557 Metallopeptidase family M24 JRY14_21360 PF00156 Phosphoribosyl transferase domain JRY14_21365 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JRY14_21370 PF01180 Dihydroorotate dehydrogenase JRY14_21375 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JRY14_21380 PF02142 MGS-like domain JRY14_21380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JRY14_21380 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JRY14_21385 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JRY14_21385 PF00117 Glutamine amidotransferase class-I JRY14_21390 PF01979 Amidohydrolase family JRY14_21395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JRY14_21395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JRY14_21400 PF00860 Permease family JRY14_21405 PF00156 Phosphoribosyl transferase domain JRY14_21410 PF00849 RNA pseudouridylate synthase JRY14_21410 PF01479 S4 domain JRY14_21415 PF01252 Signal peptidase (SPase) II JRY14_21425 PF06827 Zinc finger found in FPG and IleRS JRY14_21425 PF00133 tRNA synthetases class I (I, L, M and V) JRY14_21425 PF08264 Anticodon-binding domain of tRNA JRY14_21430 PF05103 DivIVA protein JRY14_21435 PF01479 S4 domain JRY14_21435 PF17774 Putative RNA-binding domain in YlmH JRY14_21440 PF02325 YGGT family JRY14_21445 PF04472 Cell division protein SepF JRY14_21450 PF01168 Alanine racemase, N-terminal domain JRY14_21455 PF02578 Multi-copper polyphenol oxidoreductase laccase JRY14_21460 PF05239 PRC-barrel domain JRY14_21465 PF04545 Sigma-70, region 4 JRY14_21465 PF04542 Sigma-70 region 2 JRY14_21465 PF04539 Sigma-70 region 3 JRY14_21470 PF04542 Sigma-70 region 2 JRY14_21470 PF04545 Sigma-70, region 4 JRY14_21475 PF03419 Sporulation factor SpoIIGA JRY14_21480 PF12327 FtsZ family, C-terminal domain JRY14_21480 PF00091 Tubulin/FtsZ family, GTPase domain JRY14_21485 PF02491 SHS2 domain inserted in FTSA JRY14_21490 PF03799 Cell division protein FtsQ JRY14_21490 PF08478 POTRA domain, FtsQ-type JRY14_21495 PF01565 FAD binding domain JRY14_21495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JRY14_21500 PF04101 Glycosyltransferase family 28 C-terminal domain JRY14_21500 PF03033 Glycosyltransferase family 28 N-terminal domain JRY14_21505 PF01098 Cell cycle protein JRY14_21510 PF02875 Mur ligase family, glutamate ligase domain JRY14_21510 PF08245 Mur ligase middle domain JRY14_21515 PF00953 Glycosyl transferase family 4 JRY14_21515 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JRY14_21520 PF01225 Mur ligase family, catalytic domain JRY14_21520 PF02875 Mur ligase family, glutamate ligase domain JRY14_21520 PF08245 Mur ligase middle domain JRY14_21525 PF03717 Penicillin-binding Protein dimerisation domain JRY14_21525 PF00905 Penicillin binding protein transpeptidase domain JRY14_21525 PF03793 PASTA domain JRY14_21530 PF00905 Penicillin binding protein transpeptidase domain JRY14_21530 PF03793 PASTA domain JRY14_21530 PF03717 Penicillin-binding Protein dimerisation domain JRY14_21535 PF04977 Septum formation initiator JRY14_21540 PF01795 MraW methylase family JRY14_21545 PF10079 Bacillithiol biosynthesis BshC JRY14_21550 PF08546 Ketopantoate reductase PanE/ApbA C terminal JRY14_21550 PF02558 Ketopantoate reductase PanE/ApbA JRY14_21555 PF00583 Acetyltransferase (GNAT) family JRY14_21565 PF01783 Ribosomal L32p protein family JRY14_21570 PF02620 Large ribosomal RNA subunit accumulation protein YceD JRY14_21600 PF00665 Integrase core domain JRY14_21600 PF13276 HTH-like domain JRY14_21600 PF13333 Integrase core domain JRY14_21610 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_21610 PF01476 LysM domain JRY14_21610 PF01471 Putative peptidoglycan binding domain JRY14_21615 PF05105 Bacteriophage holin family JRY14_21620 PF02371 Transposase IS116/IS110/IS902 family JRY14_21620 PF01548 Transposase JRY14_21685 PF00574 Clp protease JRY14_21730 PF00589 Phage integrase family JRY14_21745 PF01548 Transposase JRY14_21745 PF02371 Transposase IS116/IS110/IS902 family JRY14_21750 PF00753 Metallo-beta-lactamase superfamily JRY14_21755 PF00205 Thiamine pyrophosphate enzyme, central domain JRY14_21755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JRY14_21755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JRY14_21785 PF01695 IstB-like ATP binding protein JRY14_21785 PF07319 Primosomal protein DnaI N-terminus JRY14_21815 PF01381 Helix-turn-helix JRY14_21850 PF00589 Phage integrase family JRY14_21850 PF14659 Phage integrase, N-terminal SAM-like domain JRY14_21855 PF05636 HIGH Nucleotidyl Transferase JRY14_21860 PF13180 PDZ domain JRY14_21860 PF05362 Lon protease (S16) C-terminal proteolytic domain JRY14_21865 PF01734 Patatin-like phospholipase JRY14_21870 PF07670 Nucleoside recognition JRY14_21875 PF01467 Cytidylyltransferase-like JRY14_21890 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JRY14_21895 PF06133 Control of competence regulator ComK, YlbF/YmcA JRY14_21900 PF00300 Histidine phosphatase superfamily (branch 1) JRY14_21905 PF14003 YlbE-like protein JRY14_21910 PF14071 Putative coat protein JRY14_21915 PF14504 CAP-associated N-terminal JRY14_21915 PF00188 Cysteine-rich secretory protein family JRY14_21920 PF08868 YugN-like family JRY14_21925 PF00795 Carbon-nitrogen hydrolase JRY14_21930 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JRY14_21935 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JRY14_21940 PF00510 Cytochrome c oxidase subunit III JRY14_21945 PF00115 Cytochrome C and Quinol oxidase polypeptide I JRY14_21950 PF00034 Cytochrome c JRY14_21950 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JRY14_21950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JRY14_21955 PF01040 UbiA prenyltransferase family JRY14_21960 PF02628 Cytochrome oxidase assembly protein JRY14_21965 PF02436 Conserved carboxylase domain JRY14_21965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JRY14_21965 PF00364 Biotin-requiring enzyme JRY14_21965 PF00289 Biotin carboxylase, N-terminal domain JRY14_21965 PF00682 HMGL-like JRY14_21965 PF02785 Biotin carboxylase C-terminal domain JRY14_21970 PF01098 Cell cycle protein JRY14_21975 PF07408 Protein of unknown function (DUF1507) JRY14_21985 PF02562 PhoH-like protein JRY14_21985 PF13638 PIN domain JRY14_21995 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JRY14_22005 PF14036 YlaH-like protein JRY14_22010 PF00009 Elongation factor Tu GTP binding domain JRY14_22010 PF14492 Elongation Factor G, domain II JRY14_22010 PF00679 Elongation factor G C-terminus JRY14_22010 PF03144 Elongation factor Tu domain 2 JRY14_22020 PF00459 Inositol monophosphatase family JRY14_22030 PF06335 Protein of unknown function (DUF1054) JRY14_22035 PF05256 Uncharacterised protein family (UPF0223) JRY14_22040 PF01276 Orn/Lys/Arg decarboxylase, major domain JRY14_22040 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JRY14_22080 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_22080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JRY14_22085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JRY14_22085 PF00364 Biotin-requiring enzyme JRY14_22085 PF02817 e3 binding domain JRY14_22090 PF02779 Transketolase, pyrimidine binding domain JRY14_22090 PF02780 Transketolase, C-terminal domain JRY14_22095 PF00676 Dehydrogenase E1 component JRY14_22105 PF01327 Polypeptide deformylase JRY14_22115 PF07288 Protein of unknown function (DUF1447) JRY14_22120 PF17770 Ribonuclease J C-terminal domain JRY14_22120 PF00753 Metallo-beta-lactamase superfamily JRY14_22120 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JRY14_22125 PF02080 TrkA-C domain JRY14_22125 PF02254 TrkA-N domain JRY14_22135 PF07687 Peptidase dimerisation domain JRY14_22135 PF01546 Peptidase family M20/M25/M40 JRY14_22140 PF00132 Bacterial transferase hexapeptide (six repeats) JRY14_22140 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JRY14_22140 PF14602 Hexapeptide repeat of succinyl-transferase JRY14_22145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_22145 PF03466 LysR substrate binding domain JRY14_22160 PF04308 Ribonuclease H-like JRY14_22170 PF08796 Protein of unknown function (DUF1797) JRY14_22185 PF00563 EAL domain JRY14_22185 PF10388 EAL-domain associated signalling protein domain JRY14_22195 PF10518 TAT (twin-arginine translocation) pathway signal sequence JRY14_22195 PF00149 Calcineurin-like phosphoesterase JRY14_22205 PF13089 Polyphosphate kinase N-terminal domain JRY14_22205 PF13090 Polyphosphate kinase C-terminal domain 2 JRY14_22205 PF17941 Polyphosphate kinase C-terminal domain 1 JRY14_22205 PF02503 Polyphosphate kinase middle domain JRY14_22210 PF02541 Ppx/GppA phosphatase family JRY14_22215 PF14177 YkyB-like protein JRY14_22240 PF07690 Major Facilitator Superfamily JRY14_22250 PF01717 Cobalamin-independent synthase, Catalytic domain JRY14_22250 PF08267 Cobalamin-independent synthase, N-terminal domain JRY14_22260 PF14040 Deoxyribonuclease NucA/NucB JRY14_22270 PF00512 His Kinase A (phospho-acceptor) domain JRY14_22270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_22280 PF00155 Aminotransferase class I and II JRY14_22285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JRY14_22285 PF00356 Bacterial regulatory proteins, lacI family JRY14_22290 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_22295 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_22300 PF13416 Bacterial extracellular solute-binding protein JRY14_22305 PF00128 Alpha amylase, catalytic domain JRY14_22305 PF02903 Alpha amylase, N-terminal ig-like domain JRY14_22305 PF16657 Maltogenic Amylase, C-terminal domain JRY14_22310 PF00128 Alpha amylase, catalytic domain JRY14_22310 PF16657 Maltogenic Amylase, C-terminal domain JRY14_22315 PF00005 ABC transporter JRY14_22315 PF17912 MalK OB fold domain JRY14_22315 PF03459 TOBE domain JRY14_22345 PF01609 Transposase DDE domain JRY14_22360 PF02803 Thiolase, C-terminal domain JRY14_22360 PF00108 Thiolase, N-terminal domain JRY14_22365 PF00293 NUDIX domain JRY14_22395 PF03551 Transcriptional regulator PadR-like family JRY14_22415 PF01609 Transposase DDE domain JRY14_22425 PF01636 Phosphotransferase enzyme family JRY14_22430 PF00795 Carbon-nitrogen hydrolase JRY14_22435 PF00155 Aminotransferase class I and II JRY14_22440 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JRY14_22440 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JRY14_22450 PF00596 Class II Aldolase and Adducin N-terminal domain JRY14_22455 PF03079 ARD/ARD' family JRY14_22470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JRY14_22470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JRY14_22475 PF00144 Beta-lactamase JRY14_22480 PF00990 Diguanylate cyclase, GGDEF domain JRY14_22480 PF08448 PAS fold JRY14_22485 PF00881 Nitroreductase family JRY14_22500 PF02896 PEP-utilising enzyme, TIM barrel domain JRY14_22500 PF05524 PEP-utilising enzyme, N-terminal JRY14_22500 PF00391 PEP-utilising enzyme, mobile domain JRY14_22505 PF00381 PTS HPr component phosphorylation site JRY14_22510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JRY14_22510 PF02378 Phosphotransferase system, EIIC JRY14_22510 PF00367 phosphotransferase system, EIIB JRY14_22515 PF03123 CAT RNA binding domain JRY14_22515 PF00874 PRD domain JRY14_22525 PF00392 Bacterial regulatory proteins, gntR family JRY14_22525 PF07702 UTRA domain JRY14_22530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JRY14_22535 PF01979 Amidohydrolase family JRY14_22545 PF04079 Segregation and condensation complex subunit ScpB JRY14_22550 PF02616 Segregation and condensation protein ScpA JRY14_22560 PF03745 Domain of unknown function (DUF309) JRY14_22565 PF00583 Acetyltransferase (GNAT) family JRY14_22570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JRY14_22575 PF06207 Protein of unknown function (DUF1002) JRY14_22580 PF00665 Integrase core domain JRY14_22580 PF13333 Integrase core domain JRY14_22580 PF13276 HTH-like domain JRY14_22595 PF03323 Bacillus/Clostridium GerA spore germination protein JRY14_22600 PF14097 Stage V sporulation protein AE1 JRY14_22605 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JRY14_22625 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JRY14_22630 PF13782 Stage V sporulation protein AB JRY14_22635 PF12164 Stage V sporulation protein AA JRY14_22645 PF00209 Sodium:neurotransmitter symporter family JRY14_22650 PF04542 Sigma-70 region 2 JRY14_22650 PF04539 Sigma-70 region 3 JRY14_22650 PF04545 Sigma-70, region 4 JRY14_22655 PF13581 Histidine kinase-like ATPase domain JRY14_22660 PF01740 STAS domain JRY14_22665 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_22665 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_22670 PF00392 Bacterial regulatory proteins, gntR family JRY14_22675 PF00005 ABC transporter JRY14_22695 PF01047 MarR family JRY14_22705 PF00860 Permease family JRY14_22710 PF01544 CorA-like Mg2+ transporter protein JRY14_22715 PF02885 Glycosyl transferase family, helical bundle domain JRY14_22715 PF00591 Glycosyl transferase family, a/b domain JRY14_22715 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JRY14_22720 PF01048 Phosphorylase superfamily JRY14_22725 PF01676 Metalloenzyme superfamily JRY14_22730 PF13115 YtkA-like JRY14_22735 PF02899 Phage integrase, N-terminal SAM-like domain JRY14_22735 PF00589 Phage integrase family JRY14_22740 PF14004 Protein of unknown function (DUF4227) JRY14_22745 PF01475 Ferric uptake regulator family JRY14_22750 PF01944 Stage II sporulation protein M JRY14_22760 PF00293 NUDIX domain JRY14_22765 PF13072 Mother cell inhibitor of FtsZ JRY14_22770 PF00248 Aldo/keto reductase family JRY14_22775 PF00248 Aldo/keto reductase family JRY14_22780 PF13673 Acetyltransferase (GNAT) domain JRY14_22780 PF04229 GrpB protein JRY14_22790 PF02872 5'-nucleotidase, C-terminal domain JRY14_22790 PF00746 LPXTG cell wall anchor motif JRY14_22790 PF00565 Staphylococcal nuclease homologue JRY14_22790 PF00149 Calcineurin-like phosphoesterase JRY14_22800 PF12146 Serine aminopeptidase, S33 JRY14_22805 PF13726 Na+-H+ antiporter family JRY14_22805 PF03553 Na+/H+ antiporter family JRY14_22810 PF00356 Bacterial regulatory proteins, lacI family JRY14_22815 PF00583 Acetyltransferase (GNAT) family JRY14_22820 PF12146 Serine aminopeptidase, S33 JRY14_22825 PF10827 Protein of unknown function (DUF2552) JRY14_22835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JRY14_22835 PF01872 RibD C-terminal domain JRY14_22840 PF00677 Lumazine binding domain JRY14_22845 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JRY14_22845 PF00925 GTP cyclohydrolase II JRY14_22850 PF00885 6,7-dimethyl-8-ribityllumazine synthase JRY14_22860 PF06968 Biotin and Thiamin Synthesis associated domain JRY14_22860 PF04055 Radical SAM superfamily JRY14_22865 PF13847 Methyltransferase domain JRY14_22870 PF12697 Alpha/beta hydrolase family JRY14_22870 PF08241 Methyltransferase domain JRY14_22875 PF00155 Aminotransferase class I and II JRY14_22885 PF00202 Aminotransferase class-III JRY14_22895 PF03553 Na+/H+ antiporter family JRY14_22900 PF02872 5'-nucleotidase, C-terminal domain JRY14_22900 PF00149 Calcineurin-like phosphoesterase JRY14_22910 PF01037 Lrp/AsnC ligand binding domain JRY14_22910 PF13404 AsnC-type helix-turn-helix domain JRY14_22925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JRY14_22925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JRY14_22930 PF00202 Aminotransferase class-III JRY14_22935 PF00696 Amino acid kinase family JRY14_22940 PF01960 ArgJ family JRY14_22945 PF01118 Semialdehyde dehydrogenase, NAD binding domain JRY14_22945 PF02774 Semialdehyde dehydrogenase, dimerisation domain JRY14_22955 PF00106 short chain dehydrogenase JRY14_22960 PF00753 Metallo-beta-lactamase superfamily JRY14_22965 PF03807 NADP oxidoreductase coenzyme F420-dependent JRY14_22965 PF14748 Pyrroline-5-carboxylate reductase dimerisation JRY14_22970 PF03313 Serine dehydratase alpha chain JRY14_22975 PF01842 ACT domain JRY14_22975 PF03315 Serine dehydratase beta chain JRY14_22985 PF12706 Beta-lactamase superfamily domain JRY14_22985 PF00753 Metallo-beta-lactamase superfamily JRY14_23005 PF00689 Cation transporting ATPase, C-terminus JRY14_23005 PF00690 Cation transporter/ATPase, N-terminus JRY14_23010 PF02308 MgtC family JRY14_23015 PF00817 impB/mucB/samB family JRY14_23015 PF11799 impB/mucB/samB family C-terminal domain JRY14_23015 PF11798 IMS family HHH motif JRY14_23020 PF07687 Peptidase dimerisation domain JRY14_23020 PF01546 Peptidase family M20/M25/M40 JRY14_23025 PF13302 Acetyltransferase (GNAT) domain JRY14_23040 PF03734 L,D-transpeptidase catalytic domain JRY14_23045 PF06081 Aromatic acid exporter family member 1 JRY14_23045 PF11728 Putative aromatic acid exporter C-terminal domain JRY14_23050 PF00005 ABC transporter JRY14_23055 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_23060 PF00497 Bacterial extracellular solute-binding proteins, family 3 JRY14_23065 PF06491 Disulphide isomerase JRY14_23070 PF11208 Protein of unknown function (DUF2992) JRY14_23075 PF00293 NUDIX domain JRY14_23075 PF09297 NADH pyrophosphatase zinc ribbon domain JRY14_23080 PF04239 Protein of unknown function (DUF421) JRY14_23085 PF01098 Cell cycle protein JRY14_23090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JRY14_23090 PF00364 Biotin-requiring enzyme JRY14_23090 PF02817 e3 binding domain JRY14_23095 PF02780 Transketolase, C-terminal domain JRY14_23095 PF02779 Transketolase, pyrimidine binding domain JRY14_23100 PF00676 Dehydrogenase E1 component JRY14_23105 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_23105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JRY14_23110 PF00871 Acetokinase family JRY14_23115 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JRY14_23115 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JRY14_23120 PF01515 Phosphate acetyl/butaryl transferase JRY14_23125 PF02954 Bacterial regulatory protein, Fis family JRY14_23125 PF00989 PAS fold JRY14_23125 PF00158 Sigma-54 interaction domain JRY14_23135 PF03009 Glycerophosphoryl diester phosphodiesterase family JRY14_23140 PF14174 YycC-like protein JRY14_23155 PF00072 Response regulator receiver domain JRY14_23155 PF08769 Sporulation initiation factor Spo0A C terminal JRY14_23160 PF17820 PDZ domain JRY14_23160 PF05580 SpoIVB peptidase S55 JRY14_23165 PF13476 AAA domain JRY14_23170 PF01609 Transposase DDE domain JRY14_23175 PF01609 Transposase DDE domain JRY14_23180 PF02863 Arginine repressor, C-terminal domain JRY14_23180 PF01316 Arginine repressor, DNA binding domain JRY14_23190 PF01479 S4 domain JRY14_23190 PF01728 FtsJ-like methyltransferase JRY14_23195 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JRY14_23195 PF02779 Transketolase, pyrimidine binding domain JRY14_23195 PF02780 Transketolase, C-terminal domain JRY14_23200 PF00348 Polyprenyl synthetase JRY14_23205 PF02609 Exonuclease VII small subunit JRY14_23210 PF02601 Exonuclease VII, large subunit JRY14_23210 PF13742 OB-fold nucleic acid binding domain JRY14_23215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JRY14_23215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JRY14_23220 PF01029 NusB family JRY14_23225 PF03780 Asp23 family, cell envelope-related function JRY14_23230 PF00289 Biotin carboxylase, N-terminal domain JRY14_23230 PF02785 Biotin carboxylase C-terminal domain JRY14_23230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JRY14_23235 PF00364 Biotin-requiring enzyme JRY14_23245 PF12685 SpoIIIAH-like protein JRY14_23255 PF09581 Stage III sporulation protein AF (Spore_III_AF) JRY14_23260 PF09546 Stage III sporulation protein AE (spore_III_AE) JRY14_23265 PF06686 Stage III sporulation protein AC/AD protein family JRY14_23270 PF06686 Stage III sporulation protein AC/AD protein family JRY14_23275 PF09548 Stage III sporulation protein AB (spore_III_AB) JRY14_23300 PF08207 Elongation factor P (EF-P) KOW-like domain JRY14_23300 PF09285 Elongation factor P, C-terminal JRY14_23300 PF01132 Elongation factor P (EF-P) OB domain JRY14_23305 PF00557 Metallopeptidase family M24 JRY14_23305 PF01321 Creatinase/Prolidase N-terminal domain JRY14_23310 PF01220 Dehydroquinase class II JRY14_23315 PF11085 Conserved membrane protein YqhR JRY14_23320 PF07136 Protein of unknown function (DUF1385) JRY14_23330 PF13419 Haloacid dehalogenase-like hydrolase JRY14_23335 PF01325 Iron dependent repressor, N-terminal DNA binding domain JRY14_23335 PF02742 Iron dependent repressor, metal binding and dimerisation domain JRY14_23345 PF03551 Transcriptional regulator PadR-like family JRY14_23360 PF03099 Biotin/lipoate A/B protein ligase family JRY14_23365 PF00581 Rhodanese-like domain JRY14_23375 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JRY14_23375 PF00356 Bacterial regulatory proteins, lacI family JRY14_23385 PF00893 Small Multidrug Resistance protein JRY14_23390 PF00893 Small Multidrug Resistance protein JRY14_23420 PF00005 ABC transporter JRY14_23425 PF00392 Bacterial regulatory proteins, gntR family JRY14_23440 PF02347 Glycine cleavage system P-protein JRY14_23445 PF02347 Glycine cleavage system P-protein JRY14_23450 PF01571 Aminomethyltransferase folate-binding domain JRY14_23450 PF08669 Glycine cleavage T-protein C-terminal barrel domain JRY14_23455 PF00271 Helicase conserved C-terminal domain JRY14_23455 PF00176 SNF2 family N-terminal domain JRY14_23460 PF11079 Bacterial protein YqhG of unknown function JRY14_23480 PF14038 YqzE-like protein JRY14_23485 PF01202 Shikimate kinase JRY14_23520 PF00482 Type II secretion system (T2SS), protein F JRY14_23525 PF00437 Type II/IV secretion system protein JRY14_23535 PF11117 Protein of unknown function (DUF2626) JRY14_23540 PF00375 Sodium:dicarboxylate symporter family JRY14_23575 PF03033 Glycosyltransferase family 28 N-terminal domain JRY14_23575 PF04101 Glycosyltransferase family 28 C-terminal domain JRY14_23580 PF02310 B12 binding domain JRY14_23580 PF02607 B12 binding domain JRY14_23580 PF02965 Vitamin B12 dependent methionine synthase, activation domain JRY14_23580 PF00809 Pterin binding enzyme JRY14_23580 PF02574 Homocysteine S-methyltransferase JRY14_23585 PF02219 Methylenetetrahydrofolate reductase JRY14_23585 PF02574 Homocysteine S-methyltransferase JRY14_23590 PF01053 Cys/Met metabolism PLP-dependent enzyme JRY14_23595 PF01053 Cys/Met metabolism PLP-dependent enzyme JRY14_23605 PF01022 Bacterial regulatory protein, arsR family JRY14_23610 PF01609 Transposase DDE domain JRY14_23620 PF00753 Metallo-beta-lactamase superfamily JRY14_23625 PF10958 Protein of unknown function (DUF2759) JRY14_23630 PF00480 ROK family JRY14_23635 PF06014 Bacterial protein of unknown function (DUF910) JRY14_23640 PF01812 5-formyltetrahydrofolate cyclo-ligase family JRY14_23645 PF00471 Ribosomal protein L33 JRY14_23650 PF00483 Nucleotidyl transferase JRY14_23655 PF01895 PhoU domain JRY14_23660 PF00005 ABC transporter JRY14_23665 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_23670 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_23675 PF12849 PBP superfamily domain JRY14_23680 PF03717 Penicillin-binding Protein dimerisation domain JRY14_23680 PF00905 Penicillin binding protein transpeptidase domain JRY14_23685 PF07690 Major Facilitator Superfamily JRY14_23690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JRY14_23690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JRY14_23700 PF06691 Protein of unknown function (DUF1189) JRY14_23710 PF04551 GcpE protein JRY14_23715 PF01475 Ferric uptake regulator family JRY14_23720 PF00950 ABC 3 transport family JRY14_23725 PF00005 ABC transporter JRY14_23730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_23730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_23735 PF11116 Protein of unknown function (DUF2624) JRY14_23740 PF01261 Xylose isomerase-like TIM barrel JRY14_23745 PF00270 DEAD/DEAH box helicase JRY14_23745 PF00271 Helicase conserved C-terminal domain JRY14_23755 PF02401 LytB protein JRY14_23760 PF01784 NIF3 (NGG1p interacting factor 3) JRY14_23765 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JRY14_23770 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JRY14_23775 PF04539 Sigma-70 region 3 JRY14_23775 PF04542 Sigma-70 region 2 JRY14_23775 PF00140 Sigma-70 factor, region 1.2 JRY14_23775 PF03979 Sigma-70 factor, region 1.1 JRY14_23775 PF04545 Sigma-70, region 4 JRY14_23780 PF10410 DnaB-helicase binding domain of primase JRY14_23780 PF08275 DNA primase catalytic core, N-terminal domain JRY14_23780 PF01807 CHC2 zinc finger JRY14_23790 PF03618 Kinase/pyrophosphorylase JRY14_23795 PF08279 HTH domain JRY14_23795 PF00571 CBS domain JRY14_23800 PF02565 Recombination protein O C terminal JRY14_23800 PF11967 Recombination protein O N terminal JRY14_23810 PF07650 KH domain JRY14_23810 PF01926 50S ribosome-binding GTPase JRY14_23815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JRY14_23820 PF01219 Prokaryotic diacylglycerol kinase JRY14_23825 PF02130 Uncharacterized protein family UPF0054 JRY14_23830 PF07698 7TM receptor with intracellular HD hydrolase JRY14_23830 PF01966 HD domain JRY14_23830 PF07697 7TM-HD extracellular JRY14_23835 PF02562 PhoH-like protein JRY14_23840 PF06898 Putative stage IV sporulation protein YqfD JRY14_23845 PF07873 YabP family JRY14_23855 PF09424 Yqey-like protein JRY14_23860 PF01165 Ribosomal protein S21 JRY14_23865 PF04055 Radical SAM superfamily JRY14_23865 PF01938 TRAM domain JRY14_23865 PF00919 Uncharacterized protein family UPF0004 JRY14_23870 PF04452 RNA methyltransferase JRY14_23880 PF00226 DnaJ domain JRY14_23880 PF01556 DnaJ C terminal domain JRY14_23880 PF00684 DnaJ central domain JRY14_23885 PF00012 Hsp70 protein JRY14_23890 PF01025 GrpE JRY14_23900 PF04055 Radical SAM superfamily JRY14_23900 PF06969 HemN C-terminal domain JRY14_23905 PF01638 HxlR-like helix-turn-helix JRY14_23915 PF13333 Integrase core domain JRY14_23915 PF00665 Integrase core domain JRY14_23915 PF13276 HTH-like domain JRY14_23920 PF03144 Elongation factor Tu domain 2 JRY14_23920 PF06421 GTP-binding protein LepA C-terminus JRY14_23920 PF00679 Elongation factor G C-terminus JRY14_23920 PF00009 Elongation factor Tu GTP binding domain JRY14_23930 PF03418 Germination protease JRY14_23935 PF01649 Ribosomal protein S20 JRY14_23940 PF06144 DNA polymerase III, delta subunit JRY14_23945 PF14141 YqzM-like protein JRY14_23955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JRY14_23960 PF10531 SLBB domain JRY14_23965 PF03807 NADP oxidoreductase coenzyme F420-dependent JRY14_23965 PF14748 Pyrroline-5-carboxylate reductase dimerisation JRY14_23970 PF13649 Methyltransferase domain JRY14_23980 PF01966 HD domain JRY14_23985 PF01467 Cytidylyltransferase-like JRY14_23990 PF01985 CRS1 / YhbY (CRM) domain JRY14_23995 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JRY14_23995 PF01488 Shikimate / quinate 5-dehydrogenase JRY14_23995 PF08501 Shikimate dehydrogenase substrate binding domain JRY14_24000 PF01926 50S ribosome-binding GTPase JRY14_24015 PF02666 Phosphatidylserine decarboxylase JRY14_24020 PF04542 Sigma-70 region 2 JRY14_24020 PF04545 Sigma-70, region 4 JRY14_24035 PF00471 Ribosomal protein L33 JRY14_24040 PF00881 Nitroreductase family JRY14_24045 PF04607 Region found in RelA / SpoT proteins JRY14_24055 PF00245 Alkaline phosphatase JRY14_24060 PF00583 Acetyltransferase (GNAT) family JRY14_24065 PF08386 TAP-like protein JRY14_24065 PF00561 alpha/beta hydrolase fold JRY14_24100 PF13860 FlgD Ig-like domain JRY14_24100 PF05922 Peptidase inhibitor I9 JRY14_24100 PF02225 PA domain JRY14_24100 PF00082 Subtilase family JRY14_24115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JRY14_24120 PF07681 DoxX JRY14_24150 PF00005 ABC transporter JRY14_24155 PF01032 FecCD transport family JRY14_24160 PF01497 Periplasmic binding protein JRY14_24165 PF14143 YrhC-like protein JRY14_24170 PF00171 Aldehyde dehydrogenase family JRY14_24170 PF00465 Iron-containing alcohol dehydrogenase JRY14_24175 PF01053 Cys/Met metabolism PLP-dependent enzyme JRY14_24180 PF00291 Pyridoxal-phosphate dependent enzyme JRY14_24185 PF01048 Phosphorylase superfamily JRY14_24190 PF08241 Methyltransferase domain JRY14_24215 PF03449 Transcription elongation factor, N-terminal JRY14_24215 PF01272 Transcription elongation factor, GreA/GreB, C-term JRY14_24220 PF00485 Phosphoribulokinase / Uridine kinase family JRY14_24225 PF01136 Peptidase family U32 JRY14_24225 PF16325 Peptidase family U32 C-terminal domain JRY14_24230 PF01136 Peptidase family U32 JRY14_24235 PF01596 O-methyltransferase JRY14_24240 PF02618 YceG-like family JRY14_24245 PF06949 Protein of unknown function (DUF1292) JRY14_24250 PF03652 Holliday junction resolvase JRY14_24255 PF06135 IreB regulatory phosphoprotein JRY14_24260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JRY14_24260 PF01411 tRNA synthetases class II (A) JRY14_24260 PF02272 DHHA1 domain JRY14_24270 PF01594 AI-2E family transporter JRY14_24290 PF14490 Helix-hairpin-helix containing domain JRY14_24290 PF13538 UvrD-like helicase C-terminal domain JRY14_24290 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JRY14_24305 PF00266 Aminotransferase class-V JRY14_24310 PF02082 Transcriptional regulator JRY14_24315 PF16193 AAA C-terminal domain JRY14_24315 PF05496 Holliday junction DNA helicase RuvB P-loop domain JRY14_24315 PF12002 MgsA AAA+ ATPase C terminal JRY14_24325 PF00899 ThiF family JRY14_24330 PF01336 OB-fold nucleic acid binding domain JRY14_24330 PF02938 GAD domain JRY14_24330 PF00152 tRNA synthetases class II (D, K and N) JRY14_24335 PF03129 Anticodon binding domain JRY14_24335 PF13393 Histidyl-tRNA synthetase JRY14_24345 PF02580 D-Tyr-tRNA(Tyr) deacylase JRY14_24350 PF02824 TGS domain JRY14_24350 PF04607 Region found in RelA / SpoT proteins JRY14_24350 PF13291 ACT domain JRY14_24355 PF00156 Phosphoribosyl transferase domain JRY14_24360 PF01368 DHH family JRY14_24360 PF17768 RecJ OB domain JRY14_24360 PF02272 DHHA1 domain JRY14_24360 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JRY14_24365 PF01545 Cation efflux family JRY14_24365 PF16916 Dimerisation domain of Zinc Transporter JRY14_24370 PF07549 SecD/SecF GG Motif JRY14_24370 PF02355 Protein export membrane protein JRY14_24375 PF13797 Post-transcriptional regulator JRY14_24380 PF01943 Polysaccharide biosynthesis protein JRY14_24380 PF14667 Polysaccharide biosynthesis C-terminal domain JRY14_24385 PF04239 Protein of unknown function (DUF421) JRY14_24400 PF02699 Preprotein translocase subunit JRY14_24405 PF01702 Queuine tRNA-ribosyltransferase JRY14_24410 PF02547 Queuosine biosynthesis protein JRY14_24415 PF11146 Protein of unknown function (DUF2905) JRY14_24420 PF05496 Holliday junction DNA helicase RuvB P-loop domain JRY14_24420 PF17864 RuvB AAA lid domain JRY14_24420 PF05491 RuvB C-terminal winged helix domain JRY14_24425 PF07499 RuvA, C-terminal domain JRY14_24425 PF01330 RuvA N terminal domain JRY14_24430 PF01497 Periplasmic binding protein JRY14_24440 PF01609 Transposase DDE domain JRY14_24455 PF01476 LysM domain JRY14_24460 PF02445 Quinolinate synthetase A protein JRY14_24465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JRY14_24465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JRY14_24470 PF00890 FAD binding domain JRY14_24470 PF02910 Fumarate reductase flavoprotein C-term JRY14_24475 PF00266 Aminotransferase class-V JRY14_24480 PF02829 3H domain JRY14_24480 PF08279 HTH domain JRY14_24485 PF03473 MOSC domain JRY14_24485 PF03475 3-alpha domain JRY14_24490 PF01842 ACT domain JRY14_24490 PF00800 Prephenate dehydratase JRY14_24495 PF02687 FtsX-like permease family JRY14_24500 PF02687 FtsX-like permease family JRY14_24505 PF00005 ABC transporter JRY14_24510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_24515 PF00072 Response regulator receiver domain JRY14_24515 PF00486 Transcriptional regulatory protein, C terminal JRY14_24520 PF09269 Domain of unknown function (DUF1967) JRY14_24520 PF01018 GTP1/OBG JRY14_24520 PF01926 50S ribosome-binding GTPase JRY14_24525 PF14682 Sporulation initiation phospho-transferase B, C-terminal JRY14_24525 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JRY14_24530 PF01016 Ribosomal L27 protein JRY14_24535 PF04327 Cysteine protease Prp JRY14_24540 PF00829 Ribosomal prokaryotic L21 protein JRY14_24545 PF10150 Ribonuclease E/G family JRY14_24545 PF00575 S1 RNA binding domain JRY14_24550 PF02163 Peptidase family M50 JRY14_24555 PF01551 Peptidase family M23 JRY14_24560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JRY14_24565 PF03775 Septum formation inhibitor MinC, C-terminal domain JRY14_24575 PF04085 rod shape-determining protein MreC JRY14_24585 PF04002 RadC-like JAB domain JRY14_24610 PF01476 LysM domain JRY14_24610 PF01471 Putative peptidoglycan binding domain JRY14_24610 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_24615 PF05105 Bacteriophage holin family JRY14_24735 PF02371 Transposase IS116/IS110/IS902 family JRY14_24735 PF01548 Transposase JRY14_24750 PF08281 Sigma-70, region 4 JRY14_24760 PF03838 Recombination protein U JRY14_24785 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_24785 PF01348 Type II intron maturase JRY14_24855 PF09669 Phage regulatory protein Rha (Phage_pRha) JRY14_24855 PF10549 ORF11CD3 domain JRY14_24875 PF13408 Recombinase zinc beta ribbon domain JRY14_24875 PF00239 Resolvase, N terminal domain JRY14_24875 PF07508 Recombinase JRY14_24880 PF04002 RadC-like JAB domain JRY14_24885 PF02545 Maf-like protein JRY14_24895 PF02875 Mur ligase family, glutamate ligase domain JRY14_24895 PF08245 Mur ligase middle domain JRY14_24900 PF08264 Anticodon-binding domain of tRNA JRY14_24900 PF00133 tRNA synthetases class I (I, L, M and V) JRY14_24900 PF10458 Valyl tRNA synthetase tRNA binding arm JRY14_24910 PF01476 LysM domain JRY14_24915 PF00202 Aminotransferase class-III JRY14_24920 PF00490 Delta-aminolevulinic acid dehydratase JRY14_24925 PF02602 Uroporphyrinogen-III synthase HemD JRY14_24930 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JRY14_24930 PF03900 Porphobilinogen deaminase, C-terminal domain JRY14_24935 PF01578 Cytochrome C assembly protein JRY14_24940 PF01488 Shikimate / quinate 5-dehydrogenase JRY14_24940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JRY14_24940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JRY14_24945 PF01047 MarR family JRY14_24955 PF02566 OsmC-like protein JRY14_24960 PF01926 50S ribosome-binding GTPase JRY14_24965 PF02190 ATP-dependent protease La (LON) substrate-binding domain JRY14_24965 PF00004 ATPase family associated with various cellular activities (AAA) JRY14_24965 PF05362 Lon protease (S16) C-terminal proteolytic domain JRY14_24970 PF00004 ATPase family associated with various cellular activities (AAA) JRY14_24970 PF05362 Lon protease (S16) C-terminal proteolytic domain JRY14_24975 PF07724 AAA domain (Cdc48 subfamily) JRY14_24975 PF10431 C-terminal, D2-small domain, of ClpB protein JRY14_24975 PF06689 ClpX C4-type zinc finger JRY14_24980 PF05698 Bacterial trigger factor protein (TF) C-terminus JRY14_24980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JRY14_24980 PF05697 Bacterial trigger factor protein (TF) JRY14_24995 PF11724 YvbH-like oligomerisation region JRY14_24995 PF08000 Bacterial PH domain JRY14_25015 PF12850 Calcineurin-like phosphoesterase superfamily domain JRY14_25020 PF01725 Ham1 family JRY14_25025 PF01138 3' exoribonuclease family, domain 1 JRY14_25025 PF03725 3' exoribonuclease family, domain 2 JRY14_25030 PF10646 Sporulation and spore germination JRY14_25035 PF01177 Asp/Glu/Hydantoin racemase JRY14_25040 PF07690 Major Facilitator Superfamily JRY14_25050 PF00440 Bacterial regulatory proteins, tetR family JRY14_25060 PF00196 Bacterial regulatory proteins, luxR family JRY14_25065 PF00860 Permease family JRY14_25070 PF07969 Amidohydrolase family JRY14_25075 PF04024 PspC domain JRY14_25080 PF01381 Helix-turn-helix JRY14_25080 PF07883 Cupin domain JRY14_25085 PF13536 Putative multidrug resistance efflux transporter JRY14_25090 PF00230 Major intrinsic protein JRY14_25095 PF02082 Transcriptional regulator JRY14_25105 PF00005 ABC transporter JRY14_25105 PF13732 Domain of unknown function (DUF4162) JRY14_25110 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JRY14_25115 PF00691 OmpA family JRY14_25115 PF13677 Membrane MotB of proton-channel complex MotA/MotB JRY14_25120 PF01618 MotA/TolQ/ExbB proton channel family JRY14_25125 PF02557 D-alanyl-D-alanine carboxypeptidase JRY14_25130 PF03061 Thioesterase superfamily JRY14_25135 PF13085 2Fe-2S iron-sulfur cluster binding domain JRY14_25135 PF13183 4Fe-4S dicluster domain JRY14_25140 PF02910 Fumarate reductase flavoprotein C-term JRY14_25140 PF00890 FAD binding domain JRY14_25145 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JRY14_25150 PF10702 Protein of unknown function (DUF2507) JRY14_25155 PF01541 GIY-YIG catalytic domain JRY14_25155 PF02151 UvrB/uvrC motif JRY14_25155 PF08459 UvrC Helix-hairpin-helix N-terminal JRY14_25160 PF00085 Thioredoxin JRY14_25165 PF01012 Electron transfer flavoprotein domain JRY14_25165 PF00766 Electron transfer flavoprotein FAD-binding domain JRY14_25170 PF01012 Electron transfer flavoprotein domain JRY14_25175 PF00378 Enoyl-CoA hydratase/isomerase JRY14_25180 PF08359 YsiA-like protein, C-terminal region JRY14_25180 PF00440 Bacterial regulatory proteins, tetR family JRY14_25185 PF13193 AMP-binding enzyme C-terminal domain JRY14_25185 PF00501 AMP-binding enzyme JRY14_25195 PF01497 Periplasmic binding protein JRY14_25200 PF01032 FecCD transport family JRY14_25215 PF05163 DinB family JRY14_25240 PF00005 ABC transporter JRY14_25245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_25245 PF00512 His Kinase A (phospho-acceptor) domain JRY14_25250 PF00072 Response regulator receiver domain JRY14_25250 PF00486 Transcriptional regulatory protein, C terminal JRY14_25260 PF09962 Uncharacterized conserved protein (DUF2196) JRY14_25265 PF10672 S-adenosylmethionine-dependent methyltransferase JRY14_25265 PF17785 PUA-like domain JRY14_25270 PF03992 Antibiotic biosynthesis monooxygenase JRY14_25275 PF04203 Sortase domain JRY14_25280 PF00005 ABC transporter JRY14_25285 PF01032 FecCD transport family JRY14_25290 PF01497 Periplasmic binding protein JRY14_25295 PF05031 Iron Transport-associated domain JRY14_25305 PF05031 Iron Transport-associated domain JRY14_25310 PF05525 Branched-chain amino acid transport protein JRY14_25315 PF01479 S4 domain JRY14_25315 PF00849 RNA pseudouridylate synthase JRY14_25320 PF00488 MutS domain V JRY14_25320 PF01713 Smr domain JRY14_25325 PF14791 DNA polymerase beta thumb JRY14_25325 PF14716 Helix-hairpin-helix domain JRY14_25325 PF02811 PHP domain JRY14_25330 PF02674 Colicin V production protein JRY14_25335 PF05164 Cell division protein ZapA JRY14_25340 PF01351 Ribonuclease HII JRY14_25340 PF11858 Domain of unknown function (DUF3378) JRY14_25350 PF00106 short chain dehydrogenase JRY14_25355 PF01336 OB-fold nucleic acid binding domain JRY14_25355 PF00152 tRNA synthetases class II (D, K and N) JRY14_25360 PF03483 B3/4 domain JRY14_25360 PF03484 tRNA synthetase B5 domain JRY14_25360 PF03147 Ferredoxin-fold anticodon binding domain JRY14_25360 PF01588 Putative tRNA binding domain JRY14_25360 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JRY14_25365 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JRY14_25365 PF01409 tRNA synthetases class II core domain (F) JRY14_25370 PF00588 SpoU rRNA Methylase family JRY14_25370 PF08032 RNA 2'-O ribose methyltransferase substrate binding JRY14_25375 PF14098 Small, acid-soluble spore protein I JRY14_25380 PF01966 HD domain JRY14_25395 PF07690 Major Facilitator Superfamily JRY14_25405 PF16859 Tetracyclin repressor-like, C-terminal domain JRY14_25405 PF00440 Bacterial regulatory proteins, tetR family JRY14_25410 PF05343 M42 glutamyl aminopeptidase JRY14_25420 PF00453 Ribosomal protein L20 JRY14_25425 PF01632 Ribosomal protein L35 JRY14_25430 PF00707 Translation initiation factor IF-3, C-terminal domain JRY14_25430 PF05198 Translation initiation factor IF-3, N-terminal domain JRY14_25435 PF13333 Integrase core domain JRY14_25435 PF13276 HTH-like domain JRY14_25435 PF00665 Integrase core domain JRY14_25445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JRY14_25445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JRY14_25445 PF02824 TGS domain JRY14_25445 PF03129 Anticodon binding domain JRY14_25450 PF08812 YtxC-like family JRY14_25455 PF13783 Domain of unknown function (DUF4177) JRY14_25460 PF07319 Primosomal protein DnaI N-terminus JRY14_25460 PF01695 IstB-like ATP binding protein JRY14_25465 PF07261 Replication initiation and membrane attachment JRY14_25470 PF03477 ATP cone domain JRY14_25475 PF02675 S-adenosylmethionine decarboxylase JRY14_25480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JRY14_25480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JRY14_25485 PF01121 Dephospho-CoA kinase JRY14_25490 PF02659 Putative manganese efflux pump JRY14_25495 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JRY14_25495 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JRY14_25495 PF06827 Zinc finger found in FPG and IleRS JRY14_25500 PF01367 5'-3' exonuclease, C-terminal SAM fold JRY14_25500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JRY14_25500 PF00476 DNA polymerase family A JRY14_25505 PF00989 PAS fold JRY14_25505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_25505 PF16736 Single Cache-like JRY14_25505 PF00512 His Kinase A (phospho-acceptor) domain JRY14_25510 PF00486 Transcriptional regulatory protein, C terminal JRY14_25510 PF00072 Response regulator receiver domain JRY14_25520 PF00056 lactate/malate dehydrogenase, NAD binding domain JRY14_25520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JRY14_25525 PF00180 Isocitrate/isopropylmalate dehydrogenase JRY14_25530 PF00285 Citrate synthase, C-terminal domain JRY14_25535 PF04284 Protein of unknown function (DUF441) JRY14_25540 PF01594 AI-2E family transporter JRY14_25545 PF04186 FxsA cytoplasmic membrane protein JRY14_25550 PF00391 PEP-utilising enzyme, mobile domain JRY14_25550 PF00224 Pyruvate kinase, barrel domain JRY14_25550 PF02887 Pyruvate kinase, alpha/beta domain JRY14_25555 PF00365 Phosphofructokinase JRY14_25560 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JRY14_25565 PF01039 Carboxyl transferase domain JRY14_25565 PF17848 Acetyl-coA carboxylase zinc finger domain JRY14_25570 PF00392 Bacterial regulatory proteins, gntR family JRY14_25575 PF00390 Malic enzyme, N-terminal domain JRY14_25575 PF03949 Malic enzyme, NAD binding domain JRY14_25580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JRY14_25580 PF14579 Helix-hairpin-helix motif JRY14_25580 PF01336 OB-fold nucleic acid binding domain JRY14_25580 PF07733 Bacterial DNA polymerase III alpha NTPase domain JRY14_25580 PF02811 PHP domain JRY14_25585 PF14034 Sporulation protein YtrH JRY14_25595 PF02272 DHHA1 domain JRY14_25595 PF01368 DHH family JRY14_25600 PF14007 YtpI-like protein JRY14_25610 PF07085 DRTGG domain JRY14_25610 PF00571 CBS domain JRY14_25610 PF00392 Bacterial regulatory proteins, gntR family JRY14_25610 PF03061 Thioesterase superfamily JRY14_25625 PF00557 Metallopeptidase family M24 JRY14_25625 PF01321 Creatinase/Prolidase N-terminal domain JRY14_25650 PF02371 Transposase IS116/IS110/IS902 family JRY14_25650 PF01548 Transposase JRY14_25660 PF12746 GNAT acetyltransferase JRY14_25665 PF07883 Cupin domain JRY14_25675 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JRY14_25675 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JRY14_25685 PF00582 Universal stress protein family JRY14_25705 PF14698 Argininosuccinate lyase C-terminal JRY14_25705 PF00206 Lyase JRY14_25710 PF00764 Arginosuccinate synthase JRY14_25725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_25725 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_25730 PF12787 EcsC protein family JRY14_25745 PF00871 Acetokinase family JRY14_25750 PF02384 N-6 DNA Methylase JRY14_25755 PF08534 Redoxin JRY14_25760 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JRY14_25770 PF01513 ATP-NAD kinase JRY14_25775 PF07969 Amidohydrolase family JRY14_25785 PF00501 AMP-binding enzyme JRY14_25785 PF13193 AMP-binding enzyme C-terminal domain JRY14_25790 PF00269 Small, acid-soluble spore proteins, alpha/beta type JRY14_25795 PF02926 THUMP domain JRY14_25795 PF02568 Thiamine biosynthesis protein (ThiI) JRY14_25800 PF00266 Aminotransferase class-V JRY14_25805 PF06160 Septation ring formation regulator, EzrA JRY14_25815 PF01609 Transposase DDE domain JRY14_25825 PF00892 EamA-like transporter family JRY14_25830 PF00440 Bacterial regulatory proteins, tetR family JRY14_25835 PF13185 GAF domain JRY14_25840 PF01053 Cys/Met metabolism PLP-dependent enzyme JRY14_25845 PF00163 Ribosomal protein S4/S9 N-terminal domain JRY14_25845 PF01479 S4 domain JRY14_25865 PF01479 S4 domain JRY14_25865 PF00579 tRNA synthetases class I (W and Y) JRY14_25870 PF14602 Hexapeptide repeat of succinyl-transferase JRY14_25870 PF12464 Maltose acetyltransferase JRY14_25875 PF13193 AMP-binding enzyme C-terminal domain JRY14_25875 PF00501 AMP-binding enzyme JRY14_25880 PF00583 Acetyltransferase (GNAT) family JRY14_25885 PF00571 CBS domain JRY14_25890 PF00850 Histone deacetylase domain JRY14_25905 PF00486 Transcriptional regulatory protein, C terminal JRY14_25905 PF00072 Response regulator receiver domain JRY14_25910 PF00672 HAMP domain JRY14_25910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_25910 PF00512 His Kinase A (phospho-acceptor) domain JRY14_25910 PF13426 PAS domain JRY14_25915 PF12796 Ankyrin repeats (3 copies) JRY14_25920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JRY14_25925 PF01741 Large-conductance mechanosensitive channel, MscL JRY14_25950 PF00356 Bacterial regulatory proteins, lacI family JRY14_25955 PF01817 Chorismate mutase type II JRY14_25955 PF00793 DAHP synthetase I family JRY14_25960 PF07537 CamS sex pheromone cAM373 precursor JRY14_25965 PF11009 Protein of unknown function (DUF2847) JRY14_25975 PF02073 Thermophilic metalloprotease (M29) JRY14_25990 PF13302 Acetyltransferase (GNAT) domain JRY14_25995 PF02875 Mur ligase family, glutamate ligase domain JRY14_25995 PF01225 Mur ligase family, catalytic domain JRY14_25995 PF08245 Mur ligase middle domain JRY14_26005 PF17854 FtsK alpha domain JRY14_26005 PF09397 Ftsk gamma domain JRY14_26005 PF01580 FtsK/SpoIIIE family JRY14_26010 PF01476 LysM domain JRY14_26010 PF01520 N-acetylmuramoyl-L-alanine amidase JRY14_26020 PF14794 Domain of unknown function (DUF4479) JRY14_26020 PF01588 Putative tRNA binding domain JRY14_26025 PF07285 Protein of unknown function (DUF1444) JRY14_26030 PF00085 Thioredoxin JRY14_26035 PF01931 Protein of unknown function DUF84 JRY14_26040 PF05343 M42 glutamyl aminopeptidase JRY14_26050 PF00753 Metallo-beta-lactamase superfamily JRY14_26060 PF02390 Putative methyltransferase JRY14_26065 PF14165 YtzH-like protein JRY14_26070 PF01636 Phosphotransferase enzyme family JRY14_26075 PF01609 Transposase DDE domain JRY14_26080 PF00128 Alpha amylase, catalytic domain JRY14_26080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JRY14_26080 PF17999 Pullulanase N1-terminal domain JRY14_26085 PF02834 LigT like Phosphoesterase JRY14_26090 PF01546 Peptidase family M20/M25/M40 JRY14_26095 PF08220 DeoR-like helix-turn-helix domain JRY14_26100 PF01479 S4 domain JRY14_26100 PF00849 RNA pseudouridylate synthase JRY14_26105 PF01943 Polysaccharide biosynthesis protein JRY14_26105 PF14667 Polysaccharide biosynthesis C-terminal domain JRY14_26120 PF01609 Transposase DDE domain JRY14_26130 PF01022 Bacterial regulatory protein, arsR family JRY14_26135 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JRY14_26145 PF10957 Sporulation protein Cse60 JRY14_26155 PF02559 CarD-like/TRCF domain JRY14_26165 PF06800 Sugar transport protein JRY14_26180 PF02391 MoaE protein JRY14_26185 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JRY14_26190 PF03454 MoeA C-terminal region (domain IV) JRY14_26190 PF00994 Probable molybdopterin binding domain JRY14_26190 PF03453 MoeA N-terminal region (domain I and II) JRY14_26195 PF01967 MoaC family JRY14_26200 PF00899 ThiF family JRY14_26205 PF04055 Radical SAM superfamily JRY14_26205 PF06463 Molybdenum Cofactor Synthesis C JRY14_26225 PF00581 Rhodanese-like domain JRY14_26235 PF00561 alpha/beta hydrolase fold JRY14_26240 PF03323 Bacillus/Clostridium GerA spore germination protein JRY14_26245 PF03845 Spore germination protein JRY14_26275 PF09334 tRNA synthetases class I (M) JRY14_26275 PF08264 Anticodon-binding domain of tRNA JRY14_26275 PF00133 tRNA synthetases class I (I, L, M and V) JRY14_26275 PF13603 Leucyl-tRNA synthetase, Domain 2 JRY14_26285 PF00999 Sodium/hydrogen exchanger family JRY14_26290 PF02080 TrkA-C domain JRY14_26295 PF00589 Phage integrase family JRY14_26305 PF00005 ABC transporter JRY14_26310 PF04235 Protein of unknown function (DUF418) JRY14_26310 PF07786 Protein of unknown function (DUF1624) JRY14_26320 PF10732 Protein of unknown function (DUF2524) JRY14_26325 PF16199 Radical_SAM C-terminal domain JRY14_26325 PF04055 Radical SAM superfamily JRY14_26330 PF06962 Putative rRNA methylase JRY14_26335 PF01177 Asp/Glu/Hydantoin racemase JRY14_26345 PF10776 Protein of unknown function (DUF2600) JRY14_26350 PF12146 Serine aminopeptidase, S33 JRY14_26355 PF00132 Bacterial transferase hexapeptide (six repeats) JRY14_26360 PF01569 PAP2 superfamily JRY14_26365 PF13439 Glycosyltransferase Family 4 JRY14_26365 PF00534 Glycosyl transferases group 1 JRY14_26370 PF12804 MobA-like NTP transferase domain JRY14_26375 PF00994 Probable molybdopterin binding domain JRY14_26385 PF13302 Acetyltransferase (GNAT) domain JRY14_26390 PF02772 S-adenosylmethionine synthetase, central domain JRY14_26390 PF00438 S-adenosylmethionine synthetase, N-terminal domain JRY14_26390 PF02773 S-adenosylmethionine synthetase, C-terminal domain JRY14_26395 PF01293 Phosphoenolpyruvate carboxykinase JRY14_26435 PF00512 His Kinase A (phospho-acceptor) domain JRY14_26435 PF00989 PAS fold JRY14_26435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_26435 PF13426 PAS domain JRY14_26435 PF13188 PAS domain JRY14_26440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_26440 PF00512 His Kinase A (phospho-acceptor) domain JRY14_26440 PF02743 Cache domain JRY14_26445 PF18011 C-terminal domain found in long catalases JRY14_26445 PF06628 Catalase-related immune-responsive JRY14_26445 PF00199 Catalase JRY14_26455 PF08386 TAP-like protein JRY14_26455 PF00561 alpha/beta hydrolase fold JRY14_26460 PF00884 Sulfatase JRY14_26490 PF00005 ABC transporter JRY14_26495 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_26520 PF13333 Integrase core domain JRY14_26520 PF13276 HTH-like domain JRY14_26520 PF00665 Integrase core domain JRY14_26535 PF00293 NUDIX domain JRY14_26565 PF02664 S-Ribosylhomocysteinase (LuxS) JRY14_26570 PF01809 Putative membrane protein insertion efficiency factor JRY14_26575 PF00484 Carbonic anhydrase JRY14_26580 PF01654 Cytochrome bd terminal oxidase subunit I JRY14_26585 PF02322 Cytochrome bd terminal oxidase subunit II JRY14_26590 PF10676 Spore germination protein gerPA/gerPF JRY14_26600 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_26600 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_26625 PF04012 PspA/IM30 family JRY14_26640 PF02421 Ferrous iron transport protein B JRY14_26640 PF07664 Ferrous iron transport protein B C terminus JRY14_26640 PF17910 FeoB cytosolic helical domain JRY14_26640 PF07670 Nucleoside recognition JRY14_26650 PF09515 Thiamine transporter protein (Thia_YuaJ) JRY14_26655 PF00672 HAMP domain JRY14_26655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_26655 PF00512 His Kinase A (phospho-acceptor) domain JRY14_26660 PF00486 Transcriptional regulatory protein, C terminal JRY14_26660 PF00072 Response regulator receiver domain JRY14_26685 PF00156 Phosphoribosyl transferase domain JRY14_26690 PF00781 Diacylglycerol kinase catalytic domain JRY14_26710 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_26755 PF09335 SNARE associated Golgi protein JRY14_26760 PF00398 Ribosomal RNA adenine dimethylase JRY14_26765 PF02687 FtsX-like permease family JRY14_26770 PF00005 ABC transporter JRY14_26775 PF12833 Helix-turn-helix domain JRY14_26775 PF06445 GyrI-like small molecule binding domain JRY14_26795 PF07853 Protein of unknown function (DUF1648) JRY14_26795 PF13630 SdpI/YhfL protein family JRY14_26800 PF01022 Bacterial regulatory protein, arsR family JRY14_26805 PF00072 Response regulator receiver domain JRY14_26805 PF00486 Transcriptional regulatory protein, C terminal JRY14_26810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_26815 PF02687 FtsX-like permease family JRY14_26820 PF02687 FtsX-like permease family JRY14_26825 PF00005 ABC transporter JRY14_26830 PF02687 FtsX-like permease family JRY14_26840 PF00440 Bacterial regulatory proteins, tetR family JRY14_26840 PF13977 BetI-type transcriptional repressor, C-terminal JRY14_26850 PF02447 GntP family permease JRY14_26855 PF00392 Bacterial regulatory proteins, gntR family JRY14_26855 PF07702 UTRA domain JRY14_26865 PF07071 KDGP aldolase JRY14_26870 PF03841 L-seryl-tRNA selenium transferase JRY14_26875 PF01979 Amidohydrolase family JRY14_26880 PF02557 D-alanyl-D-alanine carboxypeptidase JRY14_26885 PF00512 His Kinase A (phospho-acceptor) domain JRY14_26885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_26890 PF00486 Transcriptional regulatory protein, C terminal JRY14_26890 PF00072 Response regulator receiver domain JRY14_26895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JRY14_26895 PF13378 Enolase C-terminal domain-like JRY14_26900 PF13193 AMP-binding enzyme C-terminal domain JRY14_26900 PF00501 AMP-binding enzyme JRY14_26905 PF00378 Enoyl-CoA hydratase/isomerase JRY14_26910 PF00561 alpha/beta hydrolase fold JRY14_26915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JRY14_26915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JRY14_26915 PF16582 Middle domain of thiamine pyrophosphate JRY14_26920 PF00425 chorismate binding enzyme JRY14_26925 PF01040 UbiA prenyltransferase family JRY14_26930 PF01258 Prokaryotic dksA/traR C4-type zinc finger JRY14_26935 PF00313 'Cold-shock' DNA-binding domain JRY14_26955 PF00343 Carbohydrate phosphorylase JRY14_26960 PF08323 Starch synthase catalytic domain JRY14_26960 PF00534 Glycosyl transferases group 1 JRY14_26965 PF00483 Nucleotidyl transferase JRY14_26970 PF00483 Nucleotidyl transferase JRY14_26975 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JRY14_26975 PF02806 Alpha amylase, C-terminal all-beta domain JRY14_26975 PF00128 Alpha amylase, catalytic domain JRY14_26985 PF05922 Peptidase inhibitor I9 JRY14_26985 PF13860 FlgD Ig-like domain JRY14_26985 PF02225 PA domain JRY14_26985 PF00082 Subtilase family JRY14_26990 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JRY14_26990 PF00056 lactate/malate dehydrogenase, NAD binding domain JRY14_27085 PF05697 Bacterial trigger factor protein (TF) JRY14_27085 PF05698 Bacterial trigger factor protein (TF) C-terminus JRY14_27120 PF02308 MgtC family JRY14_27125 PF07885 Ion channel JRY14_27125 PF02254 TrkA-N domain JRY14_27130 PF08868 YugN-like family JRY14_27135 PF00342 Phosphoglucose isomerase JRY14_27140 PF04070 Domain of unknown function (DUF378) JRY14_27145 PF00575 S1 RNA binding domain JRY14_27150 PF00155 Aminotransferase class I and II JRY14_27155 PF01037 Lrp/AsnC ligand binding domain JRY14_27160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JRY14_27160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JRY14_27165 PF00561 alpha/beta hydrolase fold JRY14_27165 PF08386 TAP-like protein JRY14_27175 PF00155 Aminotransferase class I and II JRY14_27190 PF08810 Kinase associated protein B JRY14_27195 PF00929 Exonuclease JRY14_27200 PF03600 Citrate transporter JRY14_27215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JRY14_27215 PF03129 Anticodon binding domain JRY14_27220 PF03061 Thioesterase superfamily JRY14_27230 PF02632 BioY family JRY14_27235 PF00483 Nucleotidyl transferase JRY14_27240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JRY14_27240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JRY14_27240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JRY14_27240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JRY14_27245 PF02457 DisA bacterial checkpoint controller nucleotide-binding JRY14_27245 PF10372 Bacterial membrane-spanning protein N-terminus JRY14_27260 PF00892 EamA-like transporter family JRY14_27265 PF01040 UbiA prenyltransferase family JRY14_27270 PF00883 Cytosol aminopeptidase family, catalytic domain JRY14_27270 PF02789 Cytosol aminopeptidase family, N-terminal domain JRY14_27275 PF06725 3D domain JRY14_27285 PF13344 Haloacid dehalogenase-like hydrolase JRY14_27285 PF00293 NUDIX domain JRY14_27290 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_27295 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_27305 PF06445 GyrI-like small molecule binding domain JRY14_27320 PF04463 Protein of unknown function (DUF523) JRY14_27370 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_27370 PF12123 N-acetylmuramoyl-l-alanine amidase JRY14_27375 PF05105 Bacteriophage holin family JRY14_27380 PF10779 Haemolysin XhlA JRY14_27515 PF04545 Sigma-70, region 4 JRY14_27515 PF04542 Sigma-70 region 2 JRY14_27515 PF04539 Sigma-70 region 3 JRY14_27540 PF03374 Phage antirepressor protein KilAC domain JRY14_27540 PF09669 Phage regulatory protein Rha (Phage_pRha) JRY14_27560 PF01381 Helix-turn-helix JRY14_27600 PF01521 Iron-sulphur cluster biosynthesis JRY14_27605 PF01678 Diaminopimelate epimerase JRY14_27610 PF07293 Protein of unknown function (DUF1450) JRY14_27615 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_27625 PF03412 Peptidase C39 family JRY14_27625 PF00005 ABC transporter JRY14_27625 PF00664 ABC transporter transmembrane region JRY14_27630 PF03649 Uncharacterised protein family (UPF0014) JRY14_27635 PF08274 PhnA Zinc-Ribbon JRY14_27635 PF03831 PhnA domain JRY14_27680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JRY14_27705 PF13427 Domain of unknown function (DUF4111) JRY14_27705 PF01909 Nucleotidyltransferase domain JRY14_27710 PF07315 Protein of unknown function (DUF1462) JRY14_27715 PF01106 NifU-like domain JRY14_27730 PF04608 Phosphatidylglycerophosphatase A JRY14_27750 PF15608 PELOTA RNA binding domain JRY14_27750 PF11202 Phosphoribosyl transferase (PRTase) JRY14_27760 PF02525 Flavodoxin-like fold JRY14_27770 PF13344 Haloacid dehalogenase-like hydrolase JRY14_27780 PF01934 Protein of unknown function DUF86 JRY14_27785 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JRY14_27805 PF06265 Protein of unknown function (DUF1027) JRY14_27810 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JRY14_27815 PF07739 TipAS antibiotic-recognition domain JRY14_27815 PF13411 MerR HTH family regulatory protein JRY14_27820 PF10086 YhfC intramembrane metalloprotease JRY14_27840 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JRY14_27840 PF04055 Radical SAM superfamily JRY14_27845 PF01551 Peptidase family M23 JRY14_27850 PF09560 Sporulation protein YunB (Spo_YunB) JRY14_27855 PF08827 Domain of unknown function (DUF1805) JRY14_27860 PF02872 5'-nucleotidase, C-terminal domain JRY14_27865 PF01458 Uncharacterized protein family (UPF0051) JRY14_27870 PF01592 NifU-like N terminal domain JRY14_27875 PF00266 Aminotransferase class-V JRY14_27880 PF01458 Uncharacterized protein family (UPF0051) JRY14_27885 PF00005 ABC transporter JRY14_27890 PF03180 NLPA lipoprotein JRY14_27895 PF03180 NLPA lipoprotein JRY14_27900 PF00528 Binding-protein-dependent transport system inner membrane component JRY14_27905 PF00005 ABC transporter JRY14_27905 PF09383 NIL domain JRY14_27915 PF00085 Thioredoxin JRY14_27920 PF01751 Toprim domain JRY14_27925 PF01597 Glycine cleavage H-protein JRY14_27930 PF03960 ArsC family JRY14_27950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JRY14_27950 PF00056 lactate/malate dehydrogenase, NAD binding domain JRY14_27970 PF13305 Tetracyclin repressor-like, C-terminal domain JRY14_27970 PF00440 Bacterial regulatory proteins, tetR family JRY14_27975 PF00753 Metallo-beta-lactamase superfamily JRY14_27980 PF02770 Acyl-CoA dehydrogenase, middle domain JRY14_27980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JRY14_27980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JRY14_27985 PF00108 Thiolase, N-terminal domain JRY14_27985 PF02803 Thiolase, C-terminal domain JRY14_27990 PF00378 Enoyl-CoA hydratase/isomerase JRY14_27990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JRY14_27990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JRY14_27995 PF14115 YuzL-like protein JRY14_28000 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_28000 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_28005 PF01619 Proline dehydrogenase JRY14_28010 PF10835 Protein of unknown function (DUF2573) JRY14_28015 PF01910 Thiamine-binding protein JRY14_28020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_28020 PF02743 Cache domain JRY14_28020 PF00672 HAMP domain JRY14_28035 PF07690 Major Facilitator Superfamily JRY14_28040 PF13520 Amino acid permease JRY14_28055 PF02096 60Kd inner membrane protein JRY14_28065 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JRY14_28065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JRY14_28100 PF09335 SNARE associated Golgi protein JRY14_28110 PF03734 L,D-transpeptidase catalytic domain JRY14_28110 PF17969 L,D-transpeptidase C-terminal domain JRY14_28115 PF00072 Response regulator receiver domain JRY14_28115 PF00486 Transcriptional regulatory protein, C terminal JRY14_28120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_28120 PF00989 PAS fold JRY14_28120 PF00512 His Kinase A (phospho-acceptor) domain JRY14_28120 PF16736 Single Cache-like JRY14_28135 PF08264 Anticodon-binding domain of tRNA JRY14_28135 PF09334 tRNA synthetases class I (M) JRY14_28150 PF01609 Transposase DDE domain JRY14_28155 PF01609 Transposase DDE domain JRY14_28165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_28165 PF02743 Cache domain JRY14_28165 PF00672 HAMP domain JRY14_28170 PF02743 Cache domain JRY14_28170 PF00672 HAMP domain JRY14_28170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_28175 PF01883 Iron-sulfur cluster assembly protein JRY14_28180 PF07504 Fungalysin/Thermolysin Propeptide Motif JRY14_28180 PF01447 Thermolysin metallopeptidase, catalytic domain JRY14_28180 PF03413 Peptidase propeptide and YPEB domain JRY14_28180 PF02868 Thermolysin metallopeptidase, alpha-helical domain JRY14_28185 PF02678 Pirin JRY14_28185 PF17954 Quercetinase C-terminal cupin domain JRY14_28190 PF01047 MarR family JRY14_28200 PF09335 SNARE associated Golgi protein JRY14_28205 PF00999 Sodium/hydrogen exchanger family JRY14_28210 PF02080 TrkA-C domain JRY14_28215 PF01235 Sodium:alanine symporter family JRY14_28220 PF00210 Ferritin-like domain JRY14_28235 PF03641 Possible lysine decarboxylase JRY14_28245 PF00210 Ferritin-like domain JRY14_28255 PF07662 Na+ dependent nucleoside transporter C-terminus JRY14_28255 PF01773 Na+ dependent nucleoside transporter N-terminus JRY14_28260 PF07662 Na+ dependent nucleoside transporter C-terminus JRY14_28260 PF01773 Na+ dependent nucleoside transporter N-terminus JRY14_28265 PF01235 Sodium:alanine symporter family JRY14_28270 PF01235 Sodium:alanine symporter family JRY14_28275 PF13460 NAD(P)H-binding JRY14_28290 PF00248 Aldo/keto reductase family JRY14_28295 PF07690 Major Facilitator Superfamily JRY14_28300 PF01638 HxlR-like helix-turn-helix JRY14_28305 PF07849 Protein of unknown function (DUF1641) JRY14_28310 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_28315 PF01479 S4 domain JRY14_28315 PF00579 tRNA synthetases class I (W and Y) JRY14_28320 PF01565 FAD binding domain JRY14_28320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JRY14_28340 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JRY14_28345 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JRY14_28360 PF13302 Acetyltransferase (GNAT) domain JRY14_28365 PF06146 Phosphate-starvation-inducible E JRY14_28375 PF00857 Isochorismatase family JRY14_28380 PF01037 Lrp/AsnC ligand binding domain JRY14_28400 PF17440 Thiol-activated cytolysin beta sandwich domain JRY14_28400 PF01289 Thiol-activated cytolysin JRY14_28405 PF00005 ABC transporter JRY14_28410 PF01032 FecCD transport family JRY14_28415 PF01032 FecCD transport family JRY14_28425 PF00072 Response regulator receiver domain JRY14_28425 PF00486 Transcriptional regulatory protein, C terminal JRY14_28440 PF01668 SmpB protein JRY14_28445 PF17876 Cold shock domain JRY14_28445 PF08206 Ribonuclease B OB domain JRY14_28445 PF00773 RNB domain JRY14_28445 PF00575 S1 RNA binding domain JRY14_28450 PF01548 Transposase JRY14_28450 PF02371 Transposase IS116/IS110/IS902 family JRY14_28455 PF01609 Transposase DDE domain JRY14_28460 PF01609 Transposase DDE domain JRY14_28475 PF17854 FtsK alpha domain JRY14_28475 PF09397 Ftsk gamma domain JRY14_28475 PF01580 FtsK/SpoIIIE family JRY14_28495 PF12123 N-acetylmuramoyl-l-alanine amidase JRY14_28495 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_28500 PF05105 Bacteriophage holin family JRY14_28510 PF01548 Transposase JRY14_28510 PF02371 Transposase IS116/IS110/IS902 family JRY14_28585 PF10668 Phage terminase small subunit JRY14_28610 PF00589 Phage integrase family JRY14_28710 PF10549 ORF11CD3 domain JRY14_28710 PF09669 Phage regulatory protein Rha (Phage_pRha) JRY14_28730 PF01381 Helix-turn-helix JRY14_28740 PF00589 Phage integrase family JRY14_28745 PF12146 Serine aminopeptidase, S33 JRY14_28750 PF03840 Preprotein translocase SecG subunit JRY14_28755 PF04172 LrgB-like family JRY14_28760 PF03788 LrgA family JRY14_28765 PF01156 Inosine-uridine preferring nucleoside hydrolase JRY14_28770 PF03952 Enolase, N-terminal domain JRY14_28770 PF00113 Enolase, C-terminal TIM barrel domain JRY14_28775 PF01676 Metalloenzyme superfamily JRY14_28775 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JRY14_28780 PF00121 Triosephosphate isomerase JRY14_28785 PF00162 Phosphoglycerate kinase JRY14_28790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JRY14_28790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JRY14_28795 PF04198 Putative sugar-binding domain JRY14_28805 PF04963 Sigma-54 factor, core binding domain JRY14_28805 PF04552 Sigma-54, DNA binding domain JRY14_28805 PF00309 Sigma-54 factor, Activator interacting domain (AID) JRY14_28830 PF01510 N-acetylmuramoyl-L-alanine amidase JRY14_28830 PF01471 Putative peptidoglycan binding domain JRY14_28830 PF01476 LysM domain JRY14_28835 PF05105 Bacteriophage holin family JRY14_28845 PF01609 Transposase DDE domain JRY14_28910 PF02371 Transposase IS116/IS110/IS902 family JRY14_28910 PF01548 Transposase JRY14_28970 PF08281 Sigma-70, region 4 JRY14_28980 PF03838 Recombination protein U JRY14_28995 PF01555 DNA methylase JRY14_29085 PF10549 ORF11CD3 domain JRY14_29085 PF09669 Phage regulatory protein Rha (Phage_pRha) JRY14_29115 PF00589 Phage integrase family JRY14_29115 PF14659 Phage integrase, N-terminal SAM-like domain JRY14_29170 PF00589 Phage integrase family JRY14_29175 PF10531 SLBB domain JRY14_29185 PF00589 Phage integrase family JRY14_29185 PF02899 Phage integrase, N-terminal SAM-like domain JRY14_29200 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JRY14_29205 PF07451 Stage V sporulation protein AD (SpoVAD) JRY14_29210 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JRY14_29220 PF04239 Protein of unknown function (DUF421) JRY14_29225 PF00574 Clp protease JRY14_29230 PF00381 PTS HPr component phosphorylation site JRY14_29235 PF10298 WhiA N-terminal LAGLIDADG-like domain JRY14_29235 PF14527 WhiA LAGLIDADG-like domain JRY14_29235 PF02650 WhiA C-terminal HTH domain JRY14_29240 PF01933 Uncharacterised protein family UPF0052 JRY14_29245 PF03668 P-loop ATPase protein family JRY14_29250 PF00293 NUDIX domain JRY14_29260 PF07992 Pyridine nucleotide-disulphide oxidoreductase JRY14_29270 PF14602 Hexapeptide repeat of succinyl-transferase JRY14_29275 PF13419 Haloacid dehalogenase-like hydrolase JRY14_29280 PF01790 Prolipoprotein diacylglyceryl transferase JRY14_29285 PF02603 HPr Serine kinase N terminus JRY14_29285 PF07475 HPr Serine kinase C-terminal domain JRY14_29290 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JRY14_29300 PF17755 UvrA DNA-binding domain JRY14_29300 PF00005 ABC transporter JRY14_29300 PF17760 UvrA interaction domain JRY14_29305 PF00271 Helicase conserved C-terminal domain JRY14_29305 PF17757 UvrB interaction domain JRY14_29305 PF12344 Ultra-violet resistance protein B JRY14_29305 PF02151 UvrB/uvrC motif JRY14_29305 PF04851 Type III restriction enzyme, res subunit JRY14_29320 PF13411 MerR HTH family regulatory protein JRY14_29320 PF07739 TipAS antibiotic-recognition domain JRY14_29335 PF03601 Conserved hypothetical protein 698 JRY14_29340 PF03466 LysR substrate binding domain JRY14_29340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_29345 PF09278 MerR, DNA binding JRY14_29345 PF00376 MerR family regulatory protein JRY14_29350 PF03358 NADPH-dependent FMN reductase JRY14_29355 PF00005 ABC transporter JRY14_29355 PF16326 ABC transporter C-terminal domain JRY14_29355 PF12848 ABC transporter JRY14_29360 PF01906 Putative heavy-metal-binding JRY14_29365 PF00005 ABC transporter JRY14_29365 PF00664 ABC transporter transmembrane region JRY14_29370 PF17820 PDZ domain JRY14_29375 PF01471 Putative peptidoglycan binding domain JRY14_29375 PF17820 PDZ domain JRY14_29375 PF03572 Peptidase family S41 JRY14_29380 PF18075 FtsX extracellular domain JRY14_29380 PF02687 FtsX-like permease family JRY14_29385 PF00005 ABC transporter JRY14_29390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JRY14_29400 PF07517 SecA DEAD-like domain JRY14_29400 PF02810 SEC-C motif JRY14_29400 PF07516 SecA Wing and Scaffold domain JRY14_29400 PF01043 SecA preprotein cross-linking domain JRY14_29405 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JRY14_29405 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JRY14_29410 PF00313 'Cold-shock' DNA-binding domain JRY14_29420 PF04851 Type III restriction enzyme, res subunit JRY14_29420 PF00271 Helicase conserved C-terminal domain JRY14_29425 PF01476 LysM domain JRY14_29425 PF08239 Bacterial SH3 domain JRY14_29425 PF00877 NlpC/P60 family JRY14_29430 PF01638 HxlR-like helix-turn-helix JRY14_29435 PF02645 Uncharacterised protein, DegV family COG1307 JRY14_29440 PF09186 Domain of unknown function (DUF1949) JRY14_29440 PF01205 Uncharacterized protein family UPF0029 JRY14_29445 PF03816 Cell envelope-related transcriptional attenuator domain JRY14_29450 PF02350 UDP-N-acetylglucosamine 2-epimerase JRY14_29455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JRY14_29455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JRY14_29455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JRY14_29460 PF00953 Glycosyl transferase family 4 JRY14_29465 PF01522 Polysaccharide deacetylase JRY14_29470 PF00158 Sigma-54 interaction domain JRY14_29470 PF03610 PTS system fructose IIA component JRY14_29470 PF00874 PRD domain JRY14_29480 PF02417 Chromate transporter JRY14_29485 PF04794 YdjC-like protein JRY14_29490 PF02056 Family 4 glycosyl hydrolase JRY14_29490 PF11975 Family 4 glycosyl hydrolase C-terminal domain JRY14_29495 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JRY14_29500 PF02378 Phosphotransferase system, EIIC JRY14_29505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JRY14_29515 PF02675 S-adenosylmethionine decarboxylase JRY14_29520 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JRY14_29525 PF02378 Phosphotransferase system, EIIC JRY14_29530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JRY14_29535 PF00375 Sodium:dicarboxylate symporter family JRY14_29555 PF03466 LysR substrate binding domain JRY14_29555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JRY14_29570 PF01654 Cytochrome bd terminal oxidase subunit I JRY14_29575 PF02322 Cytochrome bd terminal oxidase subunit II JRY14_29580 PF02040 Arsenical pump membrane protein JRY14_29585 PF13667 ThiC-associated domain JRY14_29585 PF01964 Radical SAM ThiC family JRY14_29590 PF02652 L-lactate permease JRY14_29600 PF09988 Uncharacterized metal-binding protein (DUF2227) JRY14_29610 PF00884 Sulfatase JRY14_29615 PF01063 Amino-transferase class IV JRY14_29625 PF01609 Transposase DDE domain JRY14_29635 PF01773 Na+ dependent nucleoside transporter N-terminus JRY14_29635 PF07662 Na+ dependent nucleoside transporter C-terminus JRY14_29650 PF01609 Transposase DDE domain JRY14_29660 PF02028 BCCT, betaine/carnitine/choline family transporter JRY14_29665 PF06725 3D domain JRY14_29665 PF01476 LysM domain JRY14_29685 PF01609 Transposase DDE domain JRY14_29700 PF04434 SWIM zinc finger JRY14_29705 PF00176 SNF2 family N-terminal domain JRY14_29705 PF00271 Helicase conserved C-terminal domain JRY14_29705 PF12419 SNF2 Helicase protein JRY14_29715 PF01548 Transposase JRY14_29715 PF02371 Transposase IS116/IS110/IS902 family JRY14_29740 PF04542 Sigma-70 region 2 JRY14_29740 PF04545 Sigma-70, region 4 JRY14_29745 PF04893 Yip1 domain JRY14_29750 PF12704 MacB-like periplasmic core domain JRY14_29750 PF02687 FtsX-like permease family JRY14_29755 PF00005 ABC transporter JRY14_29775 PF07690 Major Facilitator Superfamily JRY14_29790 PF00989 PAS fold JRY14_29790 PF00512 His Kinase A (phospho-acceptor) domain JRY14_29790 PF16736 Single Cache-like JRY14_29790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_29795 PF00486 Transcriptional regulatory protein, C terminal JRY14_29795 PF00072 Response regulator receiver domain JRY14_29800 PF01238 Phosphomannose isomerase type I JRY14_29805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JRY14_29805 PF02378 Phosphotransferase system, EIIC JRY14_29805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JRY14_29810 PF00874 PRD domain JRY14_29810 PF05043 Mga helix-turn-helix domain JRY14_29810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JRY14_29810 PF08279 HTH domain JRY14_29815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JRY14_29815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JRY14_29815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JRY14_29815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JRY14_29825 PF03816 Cell envelope-related transcriptional attenuator domain JRY14_29830 PF01238 Phosphomannose isomerase type I JRY14_29835 PF01050 Mannose-6-phosphate isomerase JRY14_29835 PF00483 Nucleotidyl transferase JRY14_29845 PF00534 Glycosyl transferases group 1 JRY14_29845 PF13439 Glycosyltransferase Family 4 JRY14_29850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JRY14_29850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JRY14_29850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JRY14_29855 PF04321 RmlD substrate binding domain JRY14_29860 PF16363 GDP-mannose 4,6 dehydratase JRY14_29865 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JRY14_29870 PF00483 Nucleotidyl transferase JRY14_29880 PF00534 Glycosyl transferases group 1 JRY14_29880 PF13439 Glycosyltransferase Family 4 JRY14_29895 PF02397 Bacterial sugar transferase JRY14_29900 PF00483 Nucleotidyl transferase JRY14_29910 PF13614 AAA domain JRY14_29915 PF02706 Chain length determinant protein JRY14_29915 PF13807 G-rich domain on putative tyrosine kinase JRY14_29920 PF13614 AAA domain JRY14_29925 PF07977 FabA-like domain JRY14_29935 PF12116 Stage III sporulation protein D JRY14_29945 PF01551 Peptidase family M23 JRY14_29955 PF00005 ABC transporter JRY14_29960 PF00072 Response regulator receiver domain JRY14_29960 PF04397 LytTr DNA-binding domain JRY14_29965 PF08486 Stage II sporulation protein JRY14_29970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JRY14_29980 PF06612 Protein of unknown function (DUF1146) JRY14_29985 PF00361 Proton-conducting membrane transporter JRY14_29990 PF00361 Proton-conducting membrane transporter JRY14_29995 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JRY14_29995 PF00361 Proton-conducting membrane transporter JRY14_29995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JRY14_30000 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JRY14_30005 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JRY14_30015 PF00146 NADH dehydrogenase JRY14_30020 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JRY14_30025 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JRY14_30030 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JRY14_30035 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JRY14_30040 PF00990 Diguanylate cyclase, GGDEF domain JRY14_30040 PF03707 Bacterial signalling protein N terminal repeat JRY14_30040 PF00563 EAL domain JRY14_30055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JRY14_30055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JRY14_30060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JRY14_30060 PF02874 ATP synthase alpha/beta family, beta-barrel domain JRY14_30065 PF00231 ATP synthase JRY14_30070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JRY14_30070 PF02874 ATP synthase alpha/beta family, beta-barrel domain JRY14_30070 PF00306 ATP synthase alpha/beta chain, C terminal domain JRY14_30075 PF00213 ATP synthase delta (OSCP) subunit JRY14_30080 PF00430 ATP synthase B/B' CF(0) JRY14_30085 PF00137 ATP synthase subunit C JRY14_30090 PF00119 ATP synthase A chain JRY14_30095 PF03899 ATP synthase I chain JRY14_30115 PF00464 Serine hydroxymethyltransferase JRY14_30120 PF04260 Protein of unknown function (DUF436) JRY14_30125 PF02502 Ribose/Galactose Isomerase JRY14_30130 PF01451 Low molecular weight phosphotyrosine protein phosphatase JRY14_30135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JRY14_30140 PF07681 DoxX JRY14_30145 PF01613 Flavin reductase like domain JRY14_30155 PF02659 Putative manganese efflux pump JRY14_30160 PF03481 Putative GTP-binding controlling metal-binding JRY14_30160 PF01300 Telomere recombination JRY14_30170 PF09551 Stage II sporulation protein R (spore_II_R) JRY14_30175 PF13847 Methyltransferase domain JRY14_30175 PF17827 PrmC N-terminal domain JRY14_30180 PF03462 PCRF domain JRY14_30180 PF00472 RF-1 domain JRY14_30185 PF00265 Thymidine kinase JRY14_30190 PF01197 Ribosomal protein L31 JRY14_30195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JRY14_30195 PF07498 Rho termination factor, N-terminal domain JRY14_30195 PF07497 Rho termination factor, RNA-binding domain JRY14_30200 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JRY14_30205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JRY14_30210 PF01116 Fructose-bisphosphate aldolase class-II JRY14_30215 PF00072 Response regulator receiver domain JRY14_30220 PF10740 Domain of unknown function (DUF2529) JRY14_30225 PF00117 Glutamine amidotransferase class-I JRY14_30225 PF06418 CTP synthase N-terminus JRY14_30230 PF05066 HB1, ASXL, restriction endonuclease HTH domain JRY14_30240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JRY14_30240 PF02770 Acyl-CoA dehydrogenase, middle domain JRY14_30240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JRY14_30245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JRY14_30245 PF02770 Acyl-CoA dehydrogenase, middle domain JRY14_30245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JRY14_30250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JRY14_30250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JRY14_30255 PF02803 Thiolase, C-terminal domain JRY14_30255 PF00108 Thiolase, N-terminal domain JRY14_30260 PF02754 Cysteine-rich domain JRY14_30260 PF13183 4Fe-4S dicluster domain JRY14_30265 PF13091 PLD-like domain JRY14_30270 PF03851 UV-endonuclease UvdE JRY14_30275 PF03851 UV-endonuclease UvdE JRY14_30280 PF00990 Diguanylate cyclase, GGDEF domain JRY14_30280 PF03707 Bacterial signalling protein N terminal repeat JRY14_30280 PF00563 EAL domain JRY14_30295 PF02868 Thermolysin metallopeptidase, alpha-helical domain JRY14_30295 PF01447 Thermolysin metallopeptidase, catalytic domain JRY14_30295 PF03413 Peptidase propeptide and YPEB domain JRY14_30295 PF07504 Fungalysin/Thermolysin Propeptide Motif JRY14_30300 PF00072 Response regulator receiver domain JRY14_30300 PF00196 Bacterial regulatory proteins, luxR family JRY14_30305 PF07730 Histidine kinase JRY14_30305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_30315 PF00005 ABC transporter JRY14_30320 PF00557 Metallopeptidase family M24 JRY14_30330 PF04389 Peptidase family M28 JRY14_30330 PF02225 PA domain JRY14_30345 PF08281 Sigma-70, region 4 JRY14_30345 PF04542 Sigma-70 region 2 JRY14_30350 PF00750 tRNA synthetases class I (R) JRY14_30350 PF03485 Arginyl tRNA synthetase N terminal domain JRY14_30350 PF05746 DALR anticodon binding domain JRY14_30355 PF09148 Domain of unknown function (DUF1934) JRY14_30360 PF17676 LD-carboxypeptidase C-terminal domain JRY14_30360 PF02016 LD-carboxypeptidase N-terminal domain JRY14_30375 PF00491 Arginase family JRY14_30380 PF17284 Spermidine synthase tetramerisation domain JRY14_30385 PF07690 Major Facilitator Superfamily JRY14_30390 PF13411 MerR HTH family regulatory protein JRY14_30395 PF03009 Glycerophosphoryl diester phosphodiesterase family JRY14_30400 PF00912 Transglycosylase JRY14_30400 PF00905 Penicillin binding protein transpeptidase domain JRY14_30405 PF08741 YwhD family JRY14_30410 PF02163 Peptidase family M50 JRY14_30415 PF01361 Tautomerase enzyme JRY14_30420 PF01966 HD domain JRY14_30425 PF01497 Periplasmic binding protein JRY14_30430 PF00005 ABC transporter JRY14_30435 PF01032 FecCD transport family JRY14_30440 PF01032 FecCD transport family JRY14_30445 PF07293 Protein of unknown function (DUF1450) JRY14_30455 PF03099 Biotin/lipoate A/B protein ligase family JRY14_30460 PF01515 Phosphate acetyl/butaryl transferase JRY14_30465 PF06778 Chlorite dismutase JRY14_30470 PF07943 Penicillin-binding protein 5, C-terminal domain JRY14_30470 PF00768 D-alanyl-D-alanine carboxypeptidase JRY14_30475 PF07486 Cell Wall Hydrolase JRY14_30480 PF09671 Spore coat protein (Spore_GerQ) JRY14_30500 PF07885 Ion channel JRY14_30500 PF02254 TrkA-N domain JRY14_30505 PF00860 Permease family JRY14_30515 PF12823 Domain of unknown function (DUF3817) JRY14_30520 PF03167 Uracil DNA glycosylase superfamily JRY14_30525 PF12679 ABC-2 family transporter protein JRY14_30530 PF00005 ABC transporter JRY14_30535 PF13472 GDSL-like Lipase/Acylhydrolase family JRY14_30540 PF00356 Bacterial regulatory proteins, lacI family JRY14_30540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JRY14_30550 PF01842 ACT domain JRY14_30550 PF00742 Homoserine dehydrogenase JRY14_30550 PF03447 Homoserine dehydrogenase, NAD binding domain JRY14_30555 PF04204 Homoserine O-succinyltransferase JRY14_30560 PF01053 Cys/Met metabolism PLP-dependent enzyme JRY14_30570 PF13419 Haloacid dehalogenase-like hydrolase JRY14_30575 PF00027 Cyclic nucleotide-binding domain JRY14_30580 PF02525 Flavodoxin-like fold JRY14_30585 PF00072 Response regulator receiver domain JRY14_30585 PF00196 Bacterial regulatory proteins, luxR family JRY14_30590 PF07730 Histidine kinase JRY14_30590 PF13185 GAF domain JRY14_30595 PF08543 Phosphomethylpyrimidine kinase JRY14_30600 PF07694 5TMR of 5TMR-LYT JRY14_30600 PF00990 Diguanylate cyclase, GGDEF domain JRY14_30605 PF04328 Selenoprotein, putative JRY14_30610 PF02554 Carbon starvation protein CstA JRY14_30610 PF13722 5TM C-terminal transporter carbon starvation CstA JRY14_30615 PF00072 Response regulator receiver domain JRY14_30615 PF04397 LytTr DNA-binding domain JRY14_30620 PF07690 Major Facilitator Superfamily JRY14_30625 PF03808 Glycosyl transferase WecB/TagA/CpsF family JRY14_30630 PF00534 Glycosyl transferases group 1 JRY14_30630 PF13439 Glycosyltransferase Family 4 JRY14_30640 PF03458 UPF0126 domain JRY14_30645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JRY14_30655 PF03061 Thioesterase superfamily JRY14_30660 PF00535 Glycosyl transferase family 2 JRY14_30670 PF00535 Glycosyl transferase family 2 JRY14_30680 PF09586 Bacterial membrane protein YfhO JRY14_30685 PF00535 Glycosyl transferase family 2 JRY14_30690 PF00005 ABC transporter JRY14_30690 PF12848 ABC transporter JRY14_30695 PF00440 Bacterial regulatory proteins, tetR family JRY14_30700 PF00873 AcrB/AcrD/AcrF family JRY14_30705 PF01625 Peptide methionine sulfoxide reductase JRY14_30705 PF01641 SelR domain JRY14_30710 PF01594 AI-2E family transporter JRY14_30715 PF04172 LrgB-like family JRY14_30720 PF03788 LrgA family JRY14_30725 PF00072 Response regulator receiver domain JRY14_30725 PF04397 LytTr DNA-binding domain JRY14_30730 PF07694 5TMR of 5TMR-LYT JRY14_30730 PF13492 GAF domain JRY14_30730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_30730 PF06580 Histidine kinase JRY14_30735 PF07690 Major Facilitator Superfamily JRY14_30740 PF02028 BCCT, betaine/carnitine/choline family transporter JRY14_30745 PF02898 Nitric oxide synthase, oxygenase domain JRY14_30750 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JRY14_30750 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JRY14_30760 PF02293 AmiS/UreI family transporter JRY14_30765 PF16363 GDP-mannose 4,6 dehydratase JRY14_30770 PF03006 Haemolysin-III related JRY14_30780 PF03880 DbpA RNA binding domain JRY14_30780 PF00270 DEAD/DEAH box helicase JRY14_30780 PF00271 Helicase conserved C-terminal domain JRY14_30785 PF00478 IMP dehydrogenase / GMP reductase domain JRY14_30790 PF01432 Peptidase family M3 JRY14_30790 PF08439 Oligopeptidase F JRY14_30800 PF01695 IstB-like ATP binding protein JRY14_30805 PF00665 Integrase core domain JRY14_30810 PF13276 HTH-like domain JRY14_30810 PF00665 Integrase core domain JRY14_30810 PF13333 Integrase core domain JRY14_30825 PF13188 PAS domain JRY14_30825 PF00989 PAS fold JRY14_30825 PF00512 His Kinase A (phospho-acceptor) domain JRY14_30825 PF13426 PAS domain JRY14_30825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_30830 PF02590 Predicted SPOUT methyltransferase JRY14_30840 PF13180 PDZ domain JRY14_30845 PF00753 Metallo-beta-lactamase superfamily JRY14_30850 PF09648 YycH protein JRY14_30860 PF00672 HAMP domain JRY14_30860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JRY14_30860 PF00512 His Kinase A (phospho-acceptor) domain JRY14_30860 PF13426 PAS domain JRY14_30865 PF00072 Response regulator receiver domain JRY14_30865 PF00486 Transcriptional regulatory protein, C terminal JRY14_30890 PF00709 Adenylosuccinate synthetase JRY14_30895 PF03796 DnaB-like helicase C terminal domain JRY14_30895 PF00772 DnaB-like helicase N terminal domain JRY14_30900 PF01281 Ribosomal protein L9, N-terminal domain JRY14_30900 PF03948 Ribosomal protein L9, C-terminal domain JRY14_30905 PF02272 DHHA1 domain JRY14_30905 PF01368 DHH family JRY14_30910 PF09991 Predicted membrane protein (DUF2232) JRY14_30915 PF01084 Ribosomal protein S18 JRY14_30920 PF00436 Single-strand binding protein family JRY14_30925 PF01250 Ribosomal protein S6 JRY14_30930 PF01926 50S ribosome-binding GTPase JRY14_30930 PF06071 Protein of unknown function (DUF933) JRY14_30935 PF06107 Bacterial protein of unknown function (DUF951) JRY14_30940 PF00924 Mechanosensitive ion channel JRY14_30945 PF06866 Protein of unknown function (DUF1256) JRY14_30950 PF17762 HTH domain found in ParB protein JRY14_30950 PF02195 ParB-like nuclease domain JRY14_30955 PF13614 AAA domain JRY14_30960 PF02195 ParB-like nuclease domain JRY14_30960 PF17762 HTH domain found in ParB protein JRY14_30965 PF02527 rRNA small subunit methyltransferase G JRY14_30970 PF01134 Glucose inhibited division protein A JRY14_30970 PF13932 GidA associated domain JRY14_30975 PF01926 50S ribosome-binding GTPase JRY14_30975 PF12631 MnmE helical domain JRY14_30975 PF10396 GTP-binding protein TrmE N-terminus JRY14_30980 PF14804 Jag N-terminus JRY14_30980 PF01424 R3H domain JRY14_30985 PF02096 60Kd inner membrane protein JRY14_30990 PF00825 Ribonuclease P JRY14_30995 PF00468 Ribosomal protein L34