BMB171_C0001 SM00382 ATPases associated with a variety of cellular activities BMB171_C0001 SM00760 Bacterial dnaA protein helix-turn-helix domain BMB171_C0002 SM00480 DNA polymerase III beta subunit BMB171_C0005 SM00387 Histidine kinase-like ATPases BMB171_C0005 SM00433 TopoisomeraseII BMB171_C0006 SM00434 DNA Topoisomerase IV BMB171_C0008 SM00116 Domain in cystathionine beta-synthase and other proteins. BMB171_C0008 SM01240 BMB171_C0008 BMB171_C0009 SM00936 Penicillin-binding protein 5, C-terminal domain BMB171_C0018 SM00382 ATPases associated with a variety of cellular activities BMB171_C0020 SM00493 BMB171_C0020 BMB171_C0031 SM00966 SpoVT / AbrB like domain BMB171_C0034 SM00493 BMB171_C0034 BMB171_C0035 SM00650 Ribosomal RNA adenine dimethylases BMB171_C0045 SM01400 BMB171_C0045 BMB171_C0048 SM00487 DEAD-like helicases superfamily BMB171_C0048 SM00490 helicase superfamily c-terminal domain BMB171_C0048 SM00982 BMB171_C0048 BMB171_C0048 SM01058 CarD-like/TRCF domain BMB171_C0049 SM00966 SpoVT / AbrB like domain BMB171_C0052 SM00363 S4 RNA-binding domain BMB171_C0056 SM00316 Ribosomal protein S1-like RNA-binding domain BMB171_C0057 SM00331 Sigma factor PP2C-like phosphatases BMB171_C0057 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BMB171_C0058 SM00977 TilS substrate C-terminal domain BMB171_C0060 SM00382 ATPases associated with a variety of cellular activities BMB171_C0068 SM00905 Dihydroneopterin aldolase BMB171_C0070 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C0078 SM00382 ATPases associated with a variety of cellular activities BMB171_C0078 SM01086 C-terminal, D2-small domain, of ClpB protein BMB171_C0079 SM00382 ATPases associated with a variety of cellular activities BMB171_C0081 SM00670 Large family of predicted nucleotide-binding domains BMB171_C0086 SM00840 BMB171_C0086 BMB171_C0087 SM00535 Ribonuclease III family BMB171_C0088 SM00967 RNA 2'-O ribose methyltransferase substrate binding BMB171_C0090 SM00421 helix_turn_helix, Lux Regulon BMB171_C0092 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BMB171_C0093 SM00649 Ribosomal protein L11/L12 BMB171_C0100 SM00663 RNA polymerase I subunit A N-terminus BMB171_C0103 SM00838 Elongation factor G C-terminus BMB171_C0103 SM00889 Elongation factor G, domain IV BMB171_C0105 SM01403 BMB171_C0105 BMB171_C0109 SM01382 BMB171_C0109 BMB171_C0109 SM01383 BMB171_C0109 BMB171_C0111 SM00322 K homology RNA-binding domain BMB171_C0115 SM01374 BMB171_C0115 BMB171_C0116 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BMB171_C0128 SM00316 Ribosomal protein S1-like RNA-binding domain BMB171_C0132 SM00662 RNA polymerases D BMB171_C0134 SM00382 ATPases associated with a variety of cellular activities BMB171_C0135 SM00382 ATPases associated with a variety of cellular activities BMB171_C0141 SM00646 BMB171_C0141 BMB171_C0144 SM01251 BMB171_C0144 BMB171_C0160 SM00382 ATPases associated with a variety of cellular activities BMB171_C0160 SM00930 BMB171_C0160 BMB171_C0162 SM00829 Enoylreductase BMB171_C0173 SM00382 ATPases associated with a variety of cellular activities BMB171_C0174 SM00382 ATPases associated with a variety of cellular activities BMB171_C0177 SM00342 helix_turn_helix, arabinose operon control protein BMB171_C0190 SM00563 Phosphate acyltransferases BMB171_C0192 SM00354 helix_turn _helix lactose operon repressor BMB171_C0202 SM00382 ATPases associated with a variety of cellular activities BMB171_C0206 SM00382 ATPases associated with a variety of cellular activities BMB171_C0207 SM00382 ATPases associated with a variety of cellular activities BMB171_C0221 SM00487 DEAD-like helicases superfamily BMB171_C0221 SM00490 helicase superfamily c-terminal domain BMB171_C0226 SM01005 Alanine racemase, C-terminal domain BMB171_C0229 SM00316 Ribosomal protein S1-like RNA-binding domain BMB171_C0229 SM00732 Likely ribonuclease with RNase H fold. BMB171_C0230 SM00731 SprT homologues. BMB171_C0235 SM00382 ATPases associated with a variety of cellular activities BMB171_C0236 SM00881 CoA binding domain BMB171_C0239 SM00883 Chaperonin 10 Kd subunit BMB171_C0245 SM00448 cheY-homologous receiver domain BMB171_C0245 SM00862 Transcriptional regulatory protein, C terminal BMB171_C0247 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C0247 SM00387 Histidine kinase-like ATPases BMB171_C0247 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C0253 SM00382 ATPases associated with a variety of cellular activities BMB171_C0254 SM00387 Histidine kinase-like ATPases BMB171_C0254 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C0255 SM00448 cheY-homologous receiver domain BMB171_C0255 SM00862 Transcriptional regulatory protein, C terminal BMB171_C0266 SM01001 AIR carboxylase BMB171_C0268 SM00998 Adenylosuccinate lyase C-terminus BMB171_C0271 SM01211 BMB171_C0271 BMB171_C0276 SM00798 AICARFT/IMPCHase bienzyme BMB171_C0276 SM00851 MGS-like domain BMB171_C0277 SM01209 BMB171_C0277 BMB171_C0277 SM01210 BMB171_C0277 BMB171_C0279 SM00244 prohibitin homologues BMB171_C0283 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMB171_C0283 SM00292 breast cancer carboxy-terminal domain BMB171_C0283 SM00532 Ligase N family BMB171_C0288 SM00382 ATPases associated with a variety of cellular activities BMB171_C0288 SM00930 BMB171_C0288 BMB171_C0293 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C0297 SM00845 GatB domain BMB171_C0301 SM00382 ATPases associated with a variety of cellular activities BMB171_C0315 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMB171_C0324 SM01007 Class II Aldolase and Adducin N-terminal domain BMB171_C0333 SM00387 Histidine kinase-like ATPases BMB171_C0333 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C0344 SM00062 Bacterial periplasmic substrate-binding proteins BMB171_C0344 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMB171_C0345 SM00382 ATPases associated with a variety of cellular activities BMB171_C0346 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C0346 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C0352 SM00100 Cyclic nucleotide-monophosphate binding domain BMB171_C0352 SM00419 helix_turn_helix, cAMP Regulatory protein BMB171_C0355 SM00642 Alpha-amylase domain BMB171_C0359 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMB171_C0359 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMB171_C0359 SM00493 BMB171_C0359 BMB171_C0363 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C0363 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C0370 SM00060 Fibronectin type 3 domain BMB171_C0370 SM00636 BMB171_C0370 BMB171_C0370 SM00637 BMB171_C0370 BMB171_C0377 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C0381 SM00946 Prolyl-tRNA synthetase, C-terminal BMB171_C0392 SM00831 Cation transporter/ATPase, N-terminus BMB171_C0394 SM00226 Low molecular weight phosphatase family BMB171_C0412 SM00478 endonuclease III BMB171_C0416 SM00382 ATPases associated with a variety of cellular activities BMB171_C0420 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C0431 SM00984 UDP binding domain BMB171_C0445 SM00478 endonuclease III BMB171_C0445 SM00525 BMB171_C0445 BMB171_C0450 SM00382 ATPases associated with a variety of cellular activities BMB171_C0454 SM00382 ATPases associated with a variety of cellular activities BMB171_C0466 SM00567 E-Z type HEAT repeats BMB171_C0469 SM00052 Putative diguanylate phosphodiesterase BMB171_C0469 SM00091 PAS domain BMB171_C0469 SM00267 diguanylate cyclase BMB171_C0470 SM00763 PrkA AAA domain BMB171_C0472 SM00365 Leucine-rich repeat, SDS22-like subfamily BMB171_C0472 SM00369 Leucine-rich repeats, typical (most populated) subfamily BMB171_C0472 SM00725 NEAr Transporter domain BMB171_C0475 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BMB171_C0477 SM00244 prohibitin homologues BMB171_C0478 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C0478 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C0478 SM00319 Homologues of the ligand binding domain of Tar BMB171_C0479 SM00091 PAS domain BMB171_C0479 SM00387 Histidine kinase-like ATPases BMB171_C0480 SM00448 cheY-homologous receiver domain BMB171_C0484 SM00248 ankyrin repeats BMB171_C0487 SM00382 ATPases associated with a variety of cellular activities BMB171_C0492 SM00448 cheY-homologous receiver domain BMB171_C0492 SM00862 Transcriptional regulatory protein, C terminal BMB171_C0493 SM00387 Histidine kinase-like ATPases BMB171_C0493 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C0497 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C0497 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C0498 SM00387 Histidine kinase-like ATPases BMB171_C0499 SM00448 cheY-homologous receiver domain BMB171_C0501 SM00919 Malic enzyme, NAD binding domain BMB171_C0501 SM01274 BMB171_C0501 BMB171_C0505 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C0507 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C0507 SM00387 Histidine kinase-like ATPases BMB171_C0507 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C0508 SM00448 cheY-homologous receiver domain BMB171_C0508 SM00862 Transcriptional regulatory protein, C terminal BMB171_C0513 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BMB171_C0517 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BMB171_C0517 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BMB171_C0519 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C0522 SM00028 Tetratricopeptide repeats BMB171_C0522 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C0532 SM01091 Transporter associated domain BMB171_C0535 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C0541 SM00382 ATPases associated with a variety of cellular activities BMB171_C0546 SM00327 von Willebrand factor (vWF) type A domain BMB171_C0547 SM00382 ATPases associated with a variety of cellular activities BMB171_C0548 SM00155 Phospholipase D. Active site motifs. BMB171_C0550 SM00052 Putative diguanylate phosphodiesterase BMB171_C0550 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMB171_C0550 SM00267 diguanylate cyclase BMB171_C0552 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C0552 SM00866 BMB171_C0552 BMB171_C0554 SM00642 Alpha-amylase domain BMB171_C0561 SM00382 ATPases associated with a variety of cellular activities BMB171_C0562 SM00062 Bacterial periplasmic substrate-binding proteins BMB171_C0562 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMB171_C0570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C0570 SM00387 Histidine kinase-like ATPases BMB171_C0570 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C0571 SM00448 cheY-homologous receiver domain BMB171_C0571 SM00862 Transcriptional regulatory protein, C terminal BMB171_C0576 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C0578 SM00354 helix_turn _helix lactose operon repressor BMB171_C0581 SM00382 ATPases associated with a variety of cellular activities BMB171_C0587 SM00829 Enoylreductase BMB171_C0589 SM00770 Zinc dependent phospholipase C (alpha toxin) BMB171_C0596 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C0598 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C0608 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C0626 SM00899 BMB171_C0626 BMB171_C0631 SM00116 Domain in cystathionine beta-synthase and other proteins. BMB171_C0634 SM00287 Bacterial SH3 domain homologues BMB171_C0636 SM00382 ATPases associated with a variety of cellular activities BMB171_C0653 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C0660 SM00640 Glycosyl hydrolases family 32 BMB171_C0662 SM00354 helix_turn _helix lactose operon repressor BMB171_C0677 SM00450 Rhodanese Homology Domain BMB171_C0679 SM00450 Rhodanese Homology Domain BMB171_C0680 SM00450 Rhodanese Homology Domain BMB171_C0680 SM00849 Metallo-beta-lactamase superfamily BMB171_C0684 SM00450 Rhodanese Homology Domain BMB171_C0689 SM00829 Enoylreductase BMB171_C0698 SM00287 Bacterial SH3 domain homologues BMB171_C0700 SM00382 ATPases associated with a variety of cellular activities BMB171_C0709 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BMB171_C0728 SM00344 helix_turn_helix ASNC type BMB171_C0741 SM01060 BMB171_C0741 BMB171_C0747 SM00382 ATPases associated with a variety of cellular activities BMB171_C0748 SM00382 ATPases associated with a variety of cellular activities BMB171_C0750 SM00062 Bacterial periplasmic substrate-binding proteins BMB171_C0750 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMB171_C0752 SM00382 ATPases associated with a variety of cellular activities BMB171_C0759 SM00387 Histidine kinase-like ATPases BMB171_C0760 SM00421 helix_turn_helix, Lux Regulon BMB171_C0760 SM00448 cheY-homologous receiver domain BMB171_C0766 SM00644 BMB171_C0766 BMB171_C0767 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C0773 SM00047 Lysozyme subfamily 2 BMB171_C0780 SM00646 BMB171_C0780 BMB171_C0790 SM00382 ATPases associated with a variety of cellular activities BMB171_C0791 SM00382 ATPases associated with a variety of cellular activities BMB171_C0793 SM00849 Metallo-beta-lactamase superfamily BMB171_C0797 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C0806 SM00860 SMI1 / KNR4 family BMB171_C0818 SM00091 PAS domain BMB171_C0818 SM00387 Histidine kinase-like ATPases BMB171_C0819 SM00448 cheY-homologous receiver domain BMB171_C0826 SM00507 HNH nucleases BMB171_C0855 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C0861 SM01120 BMB171_C0861 BMB171_C0864 SM00028 Tetratricopeptide repeats BMB171_C0864 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C0866 SM00460 Transglutaminase/protease-like homologues BMB171_C0881 SM00331 Sigma factor PP2C-like phosphatases BMB171_C0881 SM00448 cheY-homologous receiver domain BMB171_C0882 SM00138 Methyltransferase, chemotaxis proteins BMB171_C0883 SM00387 Histidine kinase-like ATPases BMB171_C0883 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C0883 SM00448 cheY-homologous receiver domain BMB171_C0889 SM00829 Enoylreductase BMB171_C0895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMB171_C0905 SM00835 Cupin BMB171_C0923 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C0926 SM00382 ATPases associated with a variety of cellular activities BMB171_C0956 SM00354 helix_turn _helix lactose operon repressor BMB171_C0958 SM00849 Metallo-beta-lactamase superfamily BMB171_C0967 SM00382 ATPases associated with a variety of cellular activities BMB171_C0980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMB171_C0982 SM00342 helix_turn_helix, arabinose operon control protein BMB171_C0982 SM00871 Bacterial transcription activator, effector binding domain BMB171_C0984 SM00387 Histidine kinase-like ATPases BMB171_C0984 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C0985 SM00448 cheY-homologous receiver domain BMB171_C0985 SM00862 Transcriptional regulatory protein, C terminal BMB171_C0989 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C0989 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C0997 SM00357 Cold shock protein domain BMB171_C1016 SM01060 BMB171_C1016 BMB171_C1018 SM00642 Alpha-amylase domain BMB171_C1019 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C1021 SM00316 Ribosomal protein S1-like RNA-binding domain BMB171_C1029 SM00382 ATPases associated with a variety of cellular activities BMB171_C1029 SM01086 C-terminal, D2-small domain, of ClpB protein BMB171_C1035 SM00825 Beta-ketoacyl synthase BMB171_C1042 SM00382 ATPases associated with a variety of cellular activities BMB171_C1043 SM00382 ATPases associated with a variety of cellular activities BMB171_C1050 SM00155 Phospholipase D. Active site motifs. BMB171_C1055 SM01118 BMB171_C1055 BMB171_C1057 SM00954 Region found in RelA / SpoT proteins BMB171_C1103 SM01324 BMB171_C1103 BMB171_C1110 SM00861 Transketolase, pyrimidine binding domain BMB171_C1111 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C1116 SM00382 ATPases associated with a variety of cellular activities BMB171_C1126 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C1130 SM00382 ATPases associated with a variety of cellular activities BMB171_C1134 SM00014 Acid phosphatase homologues BMB171_C1144 SM00448 cheY-homologous receiver domain BMB171_C1144 SM00862 Transcriptional regulatory protein, C terminal BMB171_C1145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C1145 SM00387 Histidine kinase-like ATPases BMB171_C1145 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C1146 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C1146 SM00895 BMB171_C1146 BMB171_C1160 SM00822 BMB171_C1160 BMB171_C1167 SM00382 ATPases associated with a variety of cellular activities BMB171_C1172 SM00420 helix_turn_helix, Deoxyribose operon repressor BMB171_C1172 SM01134 BMB171_C1172 BMB171_C1174 SM00365 Leucine-rich repeat, SDS22-like subfamily BMB171_C1174 SM00369 Leucine-rich repeats, typical (most populated) subfamily BMB171_C1174 SM00725 NEAr Transporter domain BMB171_C1175 SM01007 Class II Aldolase and Adducin N-terminal domain BMB171_C1179 SM00387 Histidine kinase-like ATPases BMB171_C1179 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C1180 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C1184 SM00387 Histidine kinase-like ATPases BMB171_C1184 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C1198 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C1199 SM00382 ATPases associated with a variety of cellular activities BMB171_C1201 SM00382 ATPases associated with a variety of cellular activities BMB171_C1205 SM00344 helix_turn_helix ASNC type BMB171_C1227 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C1238 SM00917 LeuA allosteric (dimerisation) domain BMB171_C1239 SM01329 BMB171_C1239 BMB171_C1274 SM00387 Histidine kinase-like ATPases BMB171_C1275 SM00421 helix_turn_helix, Lux Regulon BMB171_C1275 SM00448 cheY-homologous receiver domain BMB171_C1292 SM00091 PAS domain BMB171_C1292 SM00387 Histidine kinase-like ATPases BMB171_C1292 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C1296 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C1296 SM00387 Histidine kinase-like ATPases BMB171_C1296 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C1306 SM00363 S4 RNA-binding domain BMB171_C1310 SM00448 cheY-homologous receiver domain BMB171_C1310 SM00862 Transcriptional regulatory protein, C terminal BMB171_C1311 SM00091 PAS domain BMB171_C1311 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C1311 SM00387 Histidine kinase-like ATPases BMB171_C1311 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C1313 SM00257 Lysin motif BMB171_C1318 SM00487 DEAD-like helicases superfamily BMB171_C1318 SM00490 helicase superfamily c-terminal domain BMB171_C1320 SM00257 Lysin motif BMB171_C1322 SM00422 helix_turn_helix, mercury resistance BMB171_C1324 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMB171_C1327 SM00644 BMB171_C1327 BMB171_C1329 SM00870 BMB171_C1329 BMB171_C1331 SM00316 Ribosomal protein S1-like RNA-binding domain BMB171_C1343 SM00411 bacterial (prokaryotic) histone like domain BMB171_C1348 SM00562 BMB171_C1348 BMB171_C1352 SM00028 Tetratricopeptide repeats BMB171_C1353 SM00914 BMB171_C1353 BMB171_C1362 SM00986 Uracil DNA glycosylase superfamily BMB171_C1362 SM00987 UreE urease accessory protein, C-terminal domain BMB171_C1366 SM00851 MGS-like domain BMB171_C1374 SM00479 BMB171_C1374 BMB171_C1374 SM00487 DEAD-like helicases superfamily BMB171_C1374 SM00491 BMB171_C1374 BMB171_C1379 SM00478 endonuclease III BMB171_C1382 SM00060 Fibronectin type 3 domain BMB171_C1392 SM00981 BMB171_C1392 BMB171_C1395 SM00028 Tetratricopeptide repeats BMB171_C1399 SM00491 BMB171_C1399 BMB171_C1412 SM00450 Rhodanese Homology Domain BMB171_C1416 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BMB171_C1416 SM00475 5'-3' exonuclease BMB171_C1448 SM00357 Cold shock protein domain BMB171_C1458 SM00849 Metallo-beta-lactamase superfamily BMB171_C1459 SM00422 helix_turn_helix, mercury resistance BMB171_C1459 SM00871 Bacterial transcription activator, effector binding domain BMB171_C1475 SM00448 cheY-homologous receiver domain BMB171_C1476 SM00073 Histidine Phosphotransfer domain BMB171_C1476 SM00260 Two component signalling adaptor domain BMB171_C1476 SM00387 Histidine kinase-like ATPases BMB171_C1476 SM01231 BMB171_C1476 BMB171_C1498 SM00138 Methyltransferase, chemotaxis proteins BMB171_C1513 SM00382 ATPases associated with a variety of cellular activities BMB171_C1520 SM00260 Two component signalling adaptor domain BMB171_C1520 SM00448 cheY-homologous receiver domain BMB171_C1536 SM00382 ATPases associated with a variety of cellular activities BMB171_C1536 SM00962 SRP54-type protein, GTPase domain BMB171_C1538 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMB171_C1545 SM00028 Tetratricopeptide repeats BMB171_C1545 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C1552 SM00849 Metallo-beta-lactamase superfamily BMB171_C1552 SM01027 Beta-Casp domain BMB171_C1558 SM00855 Phosphoglycerate mutase family BMB171_C1562 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C1570 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C1570 SM00895 BMB171_C1570 BMB171_C1573 SM00833 Cobalamin synthesis protein cobW C-terminal domain BMB171_C1591 SM00028 Tetratricopeptide repeats BMB171_C1592 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C1598 SM00421 helix_turn_helix, Lux Regulon BMB171_C1598 SM00448 cheY-homologous receiver domain BMB171_C1600 SM00382 ATPases associated with a variety of cellular activities BMB171_C1603 SM00155 Phospholipase D. Active site motifs. BMB171_C1608 SM00919 Malic enzyme, NAD binding domain BMB171_C1608 SM01274 BMB171_C1608 BMB171_C1609 SM00387 Histidine kinase-like ATPases BMB171_C1610 SM00448 cheY-homologous receiver domain BMB171_C1611 SM00487 DEAD-like helicases superfamily BMB171_C1611 SM00490 helicase superfamily c-terminal domain BMB171_C1648 SM00854 Bacterial capsule synthesis protein PGA_cap BMB171_C1653 SM00850 LytTr DNA-binding domain BMB171_C1663 SM00448 cheY-homologous receiver domain BMB171_C1663 SM00862 Transcriptional regulatory protein, C terminal BMB171_C1667 SM00450 Rhodanese Homology Domain BMB171_C1680 SM01133 BMB171_C1680 BMB171_C1683 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BMB171_C1692 SM01011 Aminopeptidase P, N-terminal domain BMB171_C1696 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMB171_C1696 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMB171_C1696 SM00493 BMB171_C1696 BMB171_C1714 SM00833 Cobalamin synthesis protein cobW C-terminal domain BMB171_C1716 SM00382 ATPases associated with a variety of cellular activities BMB171_C1717 SM00382 ATPases associated with a variety of cellular activities BMB171_C1728 SM00382 ATPases associated with a variety of cellular activities BMB171_C1729 SM00382 ATPases associated with a variety of cellular activities BMB171_C1739 SM00287 Bacterial SH3 domain homologues BMB171_C1741 SM00382 ATPases associated with a variety of cellular activities BMB171_C1742 SM00448 cheY-homologous receiver domain BMB171_C1742 SM00862 Transcriptional regulatory protein, C terminal BMB171_C1743 SM00387 Histidine kinase-like ATPases BMB171_C1743 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C1759 SM00448 cheY-homologous receiver domain BMB171_C1759 SM00862 Transcriptional regulatory protein, C terminal BMB171_C1760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C1760 SM00387 Histidine kinase-like ATPases BMB171_C1760 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C1774 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C1778 SM00460 Transglutaminase/protease-like homologues BMB171_C1782 SM00966 SpoVT / AbrB like domain BMB171_C1784 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C1792 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C1792 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C1802 SM00833 Cobalamin synthesis protein cobW C-terminal domain BMB171_C1813 SM00855 Phosphoglycerate mutase family BMB171_C1823 SM00155 Phospholipase D. Active site motifs. BMB171_C1829 SM01091 Transporter associated domain BMB171_C1844 SM00244 prohibitin homologues BMB171_C1846 SM00855 Phosphoglycerate mutase family BMB171_C1850 SM01005 Alanine racemase, C-terminal domain BMB171_C1855 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C1890 SM00487 DEAD-like helicases superfamily BMB171_C1890 SM00490 helicase superfamily c-terminal domain BMB171_C1898 SM00849 Metallo-beta-lactamase superfamily BMB171_C1900 SM00460 Transglutaminase/protease-like homologues BMB171_C1908 SM00100 Cyclic nucleotide-monophosphate binding domain BMB171_C1908 SM00419 helix_turn_helix, cAMP Regulatory protein BMB171_C1909 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C1911 SM00852 Probable molybdopterin binding domain BMB171_C1932 SM00028 Tetratricopeptide repeats BMB171_C1936 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMB171_C1937 SM00382 ATPases associated with a variety of cellular activities BMB171_C1940 SM00567 E-Z type HEAT repeats BMB171_C1940 SM00932 Scaffold protein Nfu/NifU N terminal BMB171_C1944 SM00836 DALR anticodon binding domain BMB171_C1944 SM01016 Arginyl tRNA synthetase N terminal dom BMB171_C1946 SM00028 Tetratricopeptide repeats BMB171_C1961 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C1964 SM00382 ATPases associated with a variety of cellular activities BMB171_C1975 SM00563 Phosphate acyltransferases BMB171_C1985 SM00646 BMB171_C1985 BMB171_C1993 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMB171_C1994 SM00421 helix_turn_helix, Lux Regulon BMB171_C1994 SM00448 cheY-homologous receiver domain BMB171_C1997 SM00829 Enoylreductase BMB171_C2002 SM01350 BMB171_C2002 BMB171_C2009 SM00382 ATPases associated with a variety of cellular activities BMB171_C2018 SM01091 Transporter associated domain BMB171_C2021 SM00387 Histidine kinase-like ATPases BMB171_C2021 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C2024 SM00882 Coenzyme A transferase BMB171_C2025 SM00882 Coenzyme A transferase BMB171_C2028 SM00382 ATPases associated with a variety of cellular activities BMB171_C2035 SM00219 Tyrosine kinase, catalytic domain BMB171_C2037 SM00014 Acid phosphatase homologues BMB171_C2069 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C2077 SM00823 Phosphopantetheine attachment site BMB171_C2077 SM00824 Thioesterase BMB171_C2078 SM00923 MbtH-like protein BMB171_C2082 SM00411 bacterial (prokaryotic) histone like domain BMB171_C2092 SM00363 S4 RNA-binding domain BMB171_C2093 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMB171_C2094 SM00382 ATPases associated with a variety of cellular activities BMB171_C2097 SM00849 Metallo-beta-lactamase superfamily BMB171_C2102 SM00100 Cyclic nucleotide-monophosphate binding domain BMB171_C2104 SM00849 Metallo-beta-lactamase superfamily BMB171_C2113 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C2120 SM00357 Cold shock protein domain BMB171_C2125 SM00859 Semialdehyde dehydrogenase, NAD binding domain BMB171_C2133 SM00382 ATPases associated with a variety of cellular activities BMB171_C2134 SM00382 ATPases associated with a variety of cellular activities BMB171_C2139 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C2143 SM00835 Cupin BMB171_C2158 SM01207 BMB171_C2158 BMB171_C2166 SM00487 DEAD-like helicases superfamily BMB171_C2166 SM00490 helicase superfamily c-terminal domain BMB171_C2189 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C2190 SM00855 Phosphoglycerate mutase family BMB171_C2198 SM00421 helix_turn_helix, Lux Regulon BMB171_C2199 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C2203 SM00936 Penicillin-binding protein 5, C-terminal domain BMB171_C2207 SM00823 Phosphopantetheine attachment site BMB171_C2208 SM00823 Phosphopantetheine attachment site BMB171_C2217 SM00047 Lysozyme subfamily 2 BMB171_C2222 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BMB171_C2225 SM00382 ATPases associated with a variety of cellular activities BMB171_C2227 SM00421 helix_turn_helix, Lux Regulon BMB171_C2227 SM00448 cheY-homologous receiver domain BMB171_C2237 SM00382 ATPases associated with a variety of cellular activities BMB171_C2243 SM00878 Biotin carboxylase C-terminal domain BMB171_C2257 SM00387 Histidine kinase-like ATPases BMB171_C2257 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C2258 SM00448 cheY-homologous receiver domain BMB171_C2258 SM00862 Transcriptional regulatory protein, C terminal BMB171_C2267 SM00342 helix_turn_helix, arabinose operon control protein BMB171_C2273 SM00382 ATPases associated with a variety of cellular activities BMB171_C2276 SM00422 helix_turn_helix, mercury resistance BMB171_C2276 SM00871 Bacterial transcription activator, effector binding domain BMB171_C2287 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C2300 SM00448 cheY-homologous receiver domain BMB171_C2300 SM00862 Transcriptional regulatory protein, C terminal BMB171_C2301 SM00387 Histidine kinase-like ATPases BMB171_C2303 SM00382 ATPases associated with a variety of cellular activities BMB171_C2305 SM00382 ATPases associated with a variety of cellular activities BMB171_C2311 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C2312 SM01209 BMB171_C2312 BMB171_C2321 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C2336 SM00507 HNH nucleases BMB171_C2353 SM00287 Bacterial SH3 domain homologues BMB171_C2353 SM00644 BMB171_C2353 BMB171_C2373 SM00091 PAS domain BMB171_C2373 SM00387 Histidine kinase-like ATPases BMB171_C2373 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C2379 SM00382 ATPases associated with a variety of cellular activities BMB171_C2381 SM00387 Histidine kinase-like ATPases BMB171_C2381 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C2384 SM00829 Enoylreductase BMB171_C2385 SM00014 Acid phosphatase homologues BMB171_C2386 SM00740 BMB171_C2386 BMB171_C2396 SM00422 helix_turn_helix, mercury resistance BMB171_C2401 SM00287 Bacterial SH3 domain homologues BMB171_C2404 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C2416 SM00480 DNA polymerase III beta subunit BMB171_C2431 SM00465 GIY-YIG type nucleases (URI domain) BMB171_C2448 SM00642 Alpha-amylase domain BMB171_C2452 SM00871 Bacterial transcription activator, effector binding domain BMB171_C2474 SM00382 ATPases associated with a variety of cellular activities BMB171_C2477 SM00420 helix_turn_helix, Deoxyribose operon repressor BMB171_C2477 SM01134 BMB171_C2477 BMB171_C2485 SM00861 Transketolase, pyrimidine binding domain BMB171_C2495 SM00116 Domain in cystathionine beta-synthase and other proteins. BMB171_C2495 SM00382 ATPases associated with a variety of cellular activities BMB171_C2502 SM00060 Fibronectin type 3 domain BMB171_C2502 SM00495 Chitin-binding domain type 3 BMB171_C2520 SM00341 Helicase and RNase D C-terminal BMB171_C2520 SM00487 DEAD-like helicases superfamily BMB171_C2520 SM00490 helicase superfamily c-terminal domain BMB171_C2520 SM00956 BMB171_C2520 BMB171_C2526 SM00646 BMB171_C2526 BMB171_C2528 SM01131 BMB171_C2528 BMB171_C2531 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMB171_C2535 SM01130 BMB171_C2535 BMB171_C2539 SM00091 PAS domain BMB171_C2539 SM00382 ATPases associated with a variety of cellular activities BMB171_C2554 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMB171_C2560 SM00248 ankyrin repeats BMB171_C2565 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BMB171_C2567 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C2567 SM00387 Histidine kinase-like ATPases BMB171_C2567 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C2568 SM00448 cheY-homologous receiver domain BMB171_C2568 SM00862 Transcriptional regulatory protein, C terminal BMB171_C2607 SM00382 ATPases associated with a variety of cellular activities BMB171_C2608 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C2618 SM00062 Bacterial periplasmic substrate-binding proteins BMB171_C2619 SM00382 ATPases associated with a variety of cellular activities BMB171_C2624 SM00028 Tetratricopeptide repeats BMB171_C2635 SM00849 Metallo-beta-lactamase superfamily BMB171_C2640 SM00382 ATPases associated with a variety of cellular activities BMB171_C2649 SM00830 Chorismate mutase type II BMB171_C2666 SM00382 ATPases associated with a variety of cellular activities BMB171_C2670 SM01133 BMB171_C2670 BMB171_C2674 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C2678 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BMB171_C2681 SM00346 helix_turn_helix isocitrate lyase regulation BMB171_C2687 SM00098 Alkaline phosphatase homologues BMB171_C2688 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C2704 SM01060 BMB171_C2704 BMB171_C2734 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C2735 SM00889 Elongation factor G, domain IV BMB171_C2738 SM00773 Proposed nucleic acid binding domain BMB171_C2739 SM00860 SMI1 / KNR4 family BMB171_C2741 SM00382 ATPases associated with a variety of cellular activities BMB171_C2745 SM00342 helix_turn_helix, arabinose operon control protein BMB171_C2745 SM00871 Bacterial transcription activator, effector binding domain BMB171_C2749 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C2778 SM00797 Allophanate hydrolase subunit 2 BMB171_C2779 SM00796 Allophanate hydrolase subunit 1 BMB171_C2783 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C2799 SM00849 Metallo-beta-lactamase superfamily BMB171_C2806 SM00870 BMB171_C2806 BMB171_C2811 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMB171_C2811 SM00091 PAS domain BMB171_C2811 SM00387 Histidine kinase-like ATPases BMB171_C2811 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C2816 SM00342 helix_turn_helix, arabinose operon control protein BMB171_C2819 SM00465 GIY-YIG type nucleases (URI domain) BMB171_C2826 SM00448 cheY-homologous receiver domain BMB171_C2827 SM00387 Histidine kinase-like ATPases BMB171_C2865 SM00226 Low molecular weight phosphatase family BMB171_C2889 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C2895 SM00421 helix_turn_helix, Lux Regulon BMB171_C2895 SM00448 cheY-homologous receiver domain BMB171_C2907 SM00382 ATPases associated with a variety of cellular activities BMB171_C2909 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C2912 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C2912 SM00387 Histidine kinase-like ATPases BMB171_C2912 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C2913 SM00448 cheY-homologous receiver domain BMB171_C2913 SM00862 Transcriptional regulatory protein, C terminal BMB171_C2924 SM00342 helix_turn_helix, arabinose operon control protein BMB171_C2929 SM00644 BMB171_C2929 BMB171_C2954 SM00860 SMI1 / KNR4 family BMB171_C2971 SM00854 Bacterial capsule synthesis protein PGA_cap BMB171_C2976 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C2980 SM00382 ATPases associated with a variety of cellular activities BMB171_C2981 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C2991 SM00382 ATPases associated with a variety of cellular activities BMB171_C3000 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C3018 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C3040 SM00028 Tetratricopeptide repeats BMB171_C3045 SM01091 Transporter associated domain BMB171_C3062 SM01350 BMB171_C3062 BMB171_C3063 SM00861 Transketolase, pyrimidine binding domain BMB171_C3066 SM00829 Enoylreductase BMB171_C3068 SM00829 Enoylreductase BMB171_C3071 SM01276 BMB171_C3071 BMB171_C3072 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C3072 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C3087 SM00914 BMB171_C3087 BMB171_C3091 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C3091 SM00866 BMB171_C3091 BMB171_C3098 SM00849 Metallo-beta-lactamase superfamily BMB171_C3106 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C3109 SM00636 BMB171_C3109 BMB171_C3115 SM00871 Bacterial transcription activator, effector binding domain BMB171_C3116 SM00420 helix_turn_helix, Deoxyribose operon repressor BMB171_C3118 SM00382 ATPases associated with a variety of cellular activities BMB171_C3122 SM00849 Metallo-beta-lactamase superfamily BMB171_C3123 SM00641 Glycosyl hydrolases family 25 BMB171_C3134 SM00849 Metallo-beta-lactamase superfamily BMB171_C3155 SM00829 Enoylreductase BMB171_C3156 SM00855 Phosphoglycerate mutase family BMB171_C3158 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BMB171_C3158 SM00534 ATPase domain of DNA mismatch repair MUTS family BMB171_C3160 SM00642 Alpha-amylase domain BMB171_C3170 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C3171 SM00829 Enoylreductase BMB171_C3173 SM00028 Tetratricopeptide repeats BMB171_C3184 SM00450 Rhodanese Homology Domain BMB171_C3184 SM00849 Metallo-beta-lactamase superfamily BMB171_C3191 SM00028 Tetratricopeptide repeats BMB171_C3193 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C3193 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C3193 SM00319 Homologues of the ligand binding domain of Tar BMB171_C3200 SM00052 Putative diguanylate phosphodiesterase BMB171_C3200 SM00091 PAS domain BMB171_C3200 SM00267 diguanylate cyclase BMB171_C3201 SM00382 ATPases associated with a variety of cellular activities BMB171_C3205 SM00387 Histidine kinase-like ATPases BMB171_C3205 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C3206 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BMB171_C3213 SM00479 BMB171_C3213 BMB171_C3214 SM00357 Cold shock protein domain BMB171_C3230 SM00822 BMB171_C3230 BMB171_C3241 SM00852 Probable molybdopterin binding domain BMB171_C3244 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C3248 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BMB171_C3248 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BMB171_C3268 SM00382 ATPases associated with a variety of cellular activities BMB171_C3271 SM00434 DNA Topoisomerase IV BMB171_C3272 SM00433 TopoisomeraseII BMB171_C3274 SM00881 CoA binding domain BMB171_C3275 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMB171_C3276 SM00448 cheY-homologous receiver domain BMB171_C3276 SM00862 Transcriptional regulatory protein, C terminal BMB171_C3279 SM01207 BMB171_C3279 BMB171_C3283 SM00257 Lysin motif BMB171_C3283 SM00636 BMB171_C3283 BMB171_C3287 SM00479 BMB171_C3287 BMB171_C3289 SM00382 ATPases associated with a variety of cellular activities BMB171_C3297 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMB171_C3304 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C3312 SM00091 PAS domain BMB171_C3312 SM00387 Histidine kinase-like ATPases BMB171_C3312 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C3318 SM01058 CarD-like/TRCF domain BMB171_C3336 SM00382 ATPases associated with a variety of cellular activities BMB171_C3347 SM00287 Bacterial SH3 domain homologues BMB171_C3347 SM00641 Glycosyl hydrolases family 25 BMB171_C3348 SM00382 ATPases associated with a variety of cellular activities BMB171_C3349 SM00382 ATPases associated with a variety of cellular activities BMB171_C3352 SM00861 Transketolase, pyrimidine binding domain BMB171_C3356 SM00062 Bacterial periplasmic substrate-binding proteins BMB171_C3359 SM00857 Resolvase, N terminal domain BMB171_C3364 SM00287 Bacterial SH3 domain homologues BMB171_C3364 SM00644 BMB171_C3364 BMB171_C3377 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C3378 SM01230 BMB171_C3378 BMB171_C3379 SM00422 helix_turn_helix, mercury resistance BMB171_C3383 SM00382 ATPases associated with a variety of cellular activities BMB171_C3389 SM00287 Bacterial SH3 domain homologues BMB171_C3392 SM00420 helix_turn_helix, Deoxyribose operon repressor BMB171_C3392 SM01134 BMB171_C3392 BMB171_C3398 SM00636 BMB171_C3398 BMB171_C3401 SM00411 bacterial (prokaryotic) histone like domain BMB171_C3407 SM00382 ATPases associated with a variety of cellular activities BMB171_C3413 SM00342 helix_turn_helix, arabinose operon control protein BMB171_C3415 SM00478 endonuclease III BMB171_C3420 SM00052 Putative diguanylate phosphodiesterase BMB171_C3420 SM00091 PAS domain BMB171_C3420 SM00267 diguanylate cyclase BMB171_C3428 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C3429 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C3429 SM00866 BMB171_C3429 BMB171_C3431 SM00148 Phospholipase C, catalytic domain (part); domain X BMB171_C3433 SM00257 Lysin motif BMB171_C3437 SM00853 MutL C terminal dimerisation domain BMB171_C3437 SM01340 BMB171_C3437 BMB171_C3438 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BMB171_C3438 SM00534 ATPase domain of DNA mismatch repair MUTS family BMB171_C3441 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C3447 SM00322 K homology RNA-binding domain BMB171_C3447 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMB171_C3448 SM00382 ATPases associated with a variety of cellular activities BMB171_C3449 SM00852 Probable molybdopterin binding domain BMB171_C3459 SM00382 ATPases associated with a variety of cellular activities BMB171_C3461 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C3461 SM00866 BMB171_C3461 BMB171_C3462 SM00382 ATPases associated with a variety of cellular activities BMB171_C3462 SM00843 BMB171_C3462 BMB171_C3464 SM00849 Metallo-beta-lactamase superfamily BMB171_C3465 SM01130 BMB171_C3465 BMB171_C3467 SM00859 Semialdehyde dehydrogenase, NAD binding domain BMB171_C3473 SM00316 Ribosomal protein S1-like RNA-binding domain BMB171_C3473 SM00322 K homology RNA-binding domain BMB171_C3474 SM00904 Riboflavin kinase BMB171_C3481 SM00316 Ribosomal protein S1-like RNA-binding domain BMB171_C3481 SM00322 K homology RNA-binding domain BMB171_C3483 SM00479 BMB171_C3483 BMB171_C3483 SM00481 DNA polymerase alpha chain like domain BMB171_C3485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMB171_C3494 SM00382 ATPases associated with a variety of cellular activities BMB171_C3494 SM01086 C-terminal, D2-small domain, of ClpB protein BMB171_C3498 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMB171_C3498 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMB171_C3500 SM00881 CoA binding domain BMB171_C3510 SM00962 SRP54-type protein, GTPase domain BMB171_C3512 SM00382 ATPases associated with a variety of cellular activities BMB171_C3512 SM00962 SRP54-type protein, GTPase domain BMB171_C3512 SM00963 SRP54-type protein, helical bundle domain BMB171_C3513 SM00968 SMC proteins Flexible Hinge Domain BMB171_C3514 SM00358 Double-stranded RNA binding motif BMB171_C3514 SM00535 Ribonuclease III family BMB171_C3516 SM00822 BMB171_C3516 BMB171_C3517 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BMB171_C3520 SM00487 DEAD-like helicases superfamily BMB171_C3520 SM00490 helicase superfamily c-terminal domain BMB171_C3521 SM01120 BMB171_C3521 BMB171_C3521 SM01121 BMB171_C3521 BMB171_C3524 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BMB171_C3527 SM00220 Serine/Threonine protein kinases, catalytic domain BMB171_C3527 SM00740 BMB171_C3527 BMB171_C3528 SM00331 Sigma factor PP2C-like phosphatases BMB171_C3528 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BMB171_C3533 SM00487 DEAD-like helicases superfamily BMB171_C3533 SM00490 helicase superfamily c-terminal domain BMB171_C3535 SM01409 BMB171_C3535 BMB171_C3536 SM00072 Guanylate kinase homologues. BMB171_C3539 SM00831 Cation transporter/ATPase, N-terminus BMB171_C3548 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BMB171_C3551 SM00851 MGS-like domain BMB171_C3551 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BMB171_C3551 SM01209 BMB171_C3551 BMB171_C3552 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BMB171_C3557 SM00363 S4 RNA-binding domain BMB171_C3562 SM00363 S4 RNA-binding domain BMB171_C3570 SM00864 Tubulin/FtsZ family, GTPase domain BMB171_C3570 SM00865 Tubulin/FtsZ family, C-terminal domain BMB171_C3571 SM00842 Cell division protein FtsA BMB171_C3579 SM00740 BMB171_C3579 BMB171_C3580 SM00740 BMB171_C3580 BMB171_C3586 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BMB171_C3590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMB171_C3598 SM00855 Phosphoglycerate mutase family BMB171_C3612 SM00878 Biotin carboxylase C-terminal domain BMB171_C3616 SM00670 Large family of predicted nucleotide-binding domains BMB171_C3621 SM00838 Elongation factor G C-terminus BMB171_C3635 SM00861 Transketolase, pyrimidine binding domain BMB171_C3640 SM00849 Metallo-beta-lactamase superfamily BMB171_C3653 SM00052 Putative diguanylate phosphodiesterase BMB171_C3672 SM00387 Histidine kinase-like ATPases BMB171_C3672 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C3675 SM00354 helix_turn _helix lactose operon repressor BMB171_C3679 SM00642 Alpha-amylase domain BMB171_C3680 SM00642 Alpha-amylase domain BMB171_C3681 SM00382 ATPases associated with a variety of cellular activities BMB171_C3686 SM00382 ATPases associated with a variety of cellular activities BMB171_C3702 SM01007 Class II Aldolase and Adducin N-terminal domain BMB171_C3708 SM00267 diguanylate cyclase BMB171_C3714 SM01061 CAT RNA binding domain BMB171_C3716 SM00866 BMB171_C3716 BMB171_C3720 SM00849 Metallo-beta-lactamase superfamily BMB171_C3738 SM00387 Histidine kinase-like ATPases BMB171_C3740 SM00936 Penicillin-binding protein 5, C-terminal domain BMB171_C3741 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C3742 SM00382 ATPases associated with a variety of cellular activities BMB171_C3746 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C3750 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BMB171_C3771 SM00354 helix_turn _helix lactose operon repressor BMB171_C3780 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C3780 SM00876 Biotin and Thiamin Synthesis associated domain BMB171_C3795 SM00859 Semialdehyde dehydrogenase, NAD binding domain BMB171_C3798 SM00849 Metallo-beta-lactamase superfamily BMB171_C3803 SM00849 Metallo-beta-lactamase superfamily BMB171_C3805 SM00831 Cation transporter/ATPase, N-terminus BMB171_C3812 SM00382 ATPases associated with a variety of cellular activities BMB171_C3814 SM00062 Bacterial periplasmic substrate-binding proteins BMB171_C3814 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMB171_C3821 SM00861 Transketolase, pyrimidine binding domain BMB171_C3825 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMB171_C3827 SM00091 PAS domain BMB171_C3827 SM00382 ATPases associated with a variety of cellular activities BMB171_C3832 SM00448 cheY-homologous receiver domain BMB171_C3833 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMB171_C3836 SM00363 S4 RNA-binding domain BMB171_C3837 SM00861 Transketolase, pyrimidine binding domain BMB171_C3844 SM00878 Biotin carboxylase C-terminal domain BMB171_C3852 SM00382 ATPases associated with a variety of cellular activities BMB171_C3855 SM00841 Elongation factor P, C-terminal BMB171_C3855 SM01185 BMB171_C3855 BMB171_C3862 SM00529 Helix-turn-helix diphteria tox regulatory element BMB171_C3867 SM00450 Rhodanese Homology Domain BMB171_C3869 SM00354 helix_turn _helix lactose operon repressor BMB171_C3879 SM00487 DEAD-like helicases superfamily BMB171_C3879 SM00490 helicase superfamily c-terminal domain BMB171_C3886 SM00478 endonuclease III BMB171_C3894 SM00342 helix_turn_helix, arabinose operon control protein BMB171_C3897 SM01236 BMB171_C3897 BMB171_C3900 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C3904 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BMB171_C3911 SM00382 ATPases associated with a variety of cellular activities BMB171_C3922 SM01018 B12 binding domain BMB171_C3927 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C3929 SM00849 Metallo-beta-lactamase superfamily BMB171_C3936 SM00382 ATPases associated with a variety of cellular activities BMB171_C3948 SM00382 ATPases associated with a variety of cellular activities BMB171_C3950 SM00518 AP endonuclease family 2 BMB171_C3951 SM00487 DEAD-like helicases superfamily BMB171_C3951 SM00490 helicase superfamily c-terminal domain BMB171_C3958 SM00400 zinc finger BMB171_C3958 SM00493 BMB171_C3958 BMB171_C3958 SM00766 DNA primase DnaG DnaB-binding BMB171_C3962 SM00116 Domain in cystathionine beta-synthase and other proteins. BMB171_C3969 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMB171_C3975 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C3978 SM00271 DnaJ molecular chaperone homology domain BMB171_C3982 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C3984 SM00838 Elongation factor G C-terminus BMB171_C3989 SM00849 Metallo-beta-lactamase superfamily BMB171_C3991 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMB171_C3995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMB171_C3997 SM01103 BMB171_C3997 BMB171_C4006 SM00954 Region found in RelA / SpoT proteins BMB171_C4009 SM00098 Alkaline phosphatase homologues BMB171_C4014 SM00855 Phosphoglycerate mutase family BMB171_C4024 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C4028 SM00382 ATPases associated with a variety of cellular activities BMB171_C4048 SM00732 Likely ribonuclease with RNase H fold. BMB171_C4050 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMB171_C4059 SM00028 Tetratricopeptide repeats BMB171_C4063 SM00382 ATPases associated with a variety of cellular activities BMB171_C4070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMB171_C4070 SM00954 Region found in RelA / SpoT proteins BMB171_C4078 SM01323 BMB171_C4078 BMB171_C4081 SM00382 ATPases associated with a variety of cellular activities BMB171_C4082 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMB171_C4100 SM00382 ATPases associated with a variety of cellular activities BMB171_C4101 SM00387 Histidine kinase-like ATPases BMB171_C4102 SM00448 cheY-homologous receiver domain BMB171_C4102 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4104 SM01317 BMB171_C4104 BMB171_C4122 SM00257 Lysin motif BMB171_C4124 SM01004 Delta-aminolevulinic acid dehydratase BMB171_C4129 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C4132 SM00382 ATPases associated with a variety of cellular activities BMB171_C4132 SM00464 Found in ATP-dependent protease La (LON) BMB171_C4133 SM00382 ATPases associated with a variety of cellular activities BMB171_C4134 SM00382 ATPases associated with a variety of cellular activities BMB171_C4134 SM00994 ClpX C4-type zinc finger BMB171_C4134 SM01086 C-terminal, D2-small domain, of ClpB protein BMB171_C4141 SM00909 Sporulation and spore germination BMB171_C4147 SM00421 helix_turn_helix, Lux Regulon BMB171_C4151 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C4156 SM00382 ATPases associated with a variety of cellular activities BMB171_C4166 SM00465 GIY-YIG type nucleases (URI domain) BMB171_C4168 SM00893 Electron transfer flavoprotein domain BMB171_C4169 SM00893 Electron transfer flavoprotein domain BMB171_C4181 SM00382 ATPases associated with a variety of cellular activities BMB171_C4182 SM00387 Histidine kinase-like ATPases BMB171_C4182 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C4183 SM00448 cheY-homologous receiver domain BMB171_C4183 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4186 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BMB171_C4189 SM00382 ATPases associated with a variety of cellular activities BMB171_C4192 SM00725 NEAr Transporter domain BMB171_C4193 SM00725 NEAr Transporter domain BMB171_C4194 SM00725 NEAr Transporter domain BMB171_C4198 SM00463 Small MutS-related domain BMB171_C4198 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BMB171_C4198 SM00534 ATPase domain of DNA mismatch repair MUTS family BMB171_C4199 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BMB171_C4199 SM00481 DNA polymerase alpha chain like domain BMB171_C4199 SM00483 DNA polymerase X family BMB171_C4206 SM00873 B3/4 domain BMB171_C4206 SM00874 tRNA synthetase B5 domain BMB171_C4206 SM00896 Ferredoxin-fold anticodon binding domain BMB171_C4208 SM00967 RNA 2'-O ribose methyltransferase substrate binding BMB171_C4219 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BMB171_C4221 SM00382 ATPases associated with a variety of cellular activities BMB171_C4226 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMB171_C4229 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BMB171_C4229 SM01232 BMB171_C4229 BMB171_C4230 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BMB171_C4230 SM00474 3'-5' exonuclease BMB171_C4230 SM00475 5'-3' exonuclease BMB171_C4230 SM00482 DNA polymerase A domain BMB171_C4231 SM00091 PAS domain BMB171_C4231 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C4231 SM00387 Histidine kinase-like ATPases BMB171_C4231 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C4232 SM00448 cheY-homologous receiver domain BMB171_C4232 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4236 SM01329 BMB171_C4236 BMB171_C4244 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C4245 SM00919 Malic enzyme, NAD binding domain BMB171_C4245 SM01274 BMB171_C4245 BMB171_C4246 SM00481 DNA polymerase alpha chain like domain BMB171_C4252 SM00116 Domain in cystathionine beta-synthase and other proteins. BMB171_C4254 SM00849 Metallo-beta-lactamase superfamily BMB171_C4263 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BMB171_C4263 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BMB171_C4287 SM00981 BMB171_C4287 BMB171_C4295 SM00363 S4 RNA-binding domain BMB171_C4295 SM01390 BMB171_C4295 BMB171_C4300 SM00363 S4 RNA-binding domain BMB171_C4301 SM01266 BMB171_C4301 BMB171_C4304 SM00116 Domain in cystathionine beta-synthase and other proteins. BMB171_C4307 SM00448 cheY-homologous receiver domain BMB171_C4307 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4308 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C4308 SM00387 Histidine kinase-like ATPases BMB171_C4308 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C4309 SM00248 ankyrin repeats BMB171_C4314 SM00354 helix_turn _helix lactose operon repressor BMB171_C4315 SM00830 Chorismate mutase type II BMB171_C4328 SM00382 ATPases associated with a variety of cellular activities BMB171_C4328 SM00843 BMB171_C4328 BMB171_C4329 SM00646 BMB171_C4329 BMB171_C4337 SM00849 Metallo-beta-lactamase superfamily BMB171_C4341 SM00642 Alpha-amylase domain BMB171_C4344 SM00363 S4 RNA-binding domain BMB171_C4348 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C4352 SM01058 CarD-like/TRCF domain BMB171_C4359 SM00852 Probable molybdopterin binding domain BMB171_C4362 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C4370 SM00450 Rhodanese Homology Domain BMB171_C4384 SM00382 ATPases associated with a variety of cellular activities BMB171_C4388 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C4397 SM00014 Acid phosphatase homologues BMB171_C4400 SM00852 Probable molybdopterin binding domain BMB171_C4411 SM00420 helix_turn_helix, Deoxyribose operon repressor BMB171_C4411 SM01134 BMB171_C4411 BMB171_C4414 SM00387 Histidine kinase-like ATPases BMB171_C4415 SM00387 Histidine kinase-like ATPases BMB171_C4415 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C4421 SM00382 ATPases associated with a variety of cellular activities BMB171_C4432 SM00947 Carbonic anhydrase BMB171_C4445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C4445 SM00387 Histidine kinase-like ATPases BMB171_C4445 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C4446 SM00448 cheY-homologous receiver domain BMB171_C4446 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4452 SM00046 Diacylglycerol kinase catalytic domain (presumed) BMB171_C4462 SM00382 ATPases associated with a variety of cellular activities BMB171_C4467 SM00382 ATPases associated with a variety of cellular activities BMB171_C4468 SM00342 helix_turn_helix, arabinose operon control protein BMB171_C4468 SM00871 Bacterial transcription activator, effector binding domain BMB171_C4469 SM00422 helix_turn_helix, mercury resistance BMB171_C4473 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_C4474 SM00448 cheY-homologous receiver domain BMB171_C4474 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4475 SM00387 Histidine kinase-like ATPases BMB171_C4478 SM00382 ATPases associated with a variety of cellular activities BMB171_C4482 SM00345 helix_turn_helix gluconate operon transcriptional repressor BMB171_C4482 SM00866 BMB171_C4482 BMB171_C4488 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C4488 SM00387 Histidine kinase-like ATPases BMB171_C4488 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C4489 SM00448 cheY-homologous receiver domain BMB171_C4489 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4490 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BMB171_C4498 SM00357 Cold shock protein domain BMB171_C4506 SM00642 Alpha-amylase domain BMB171_C4515 SM00316 Ribosomal protein S1-like RNA-binding domain BMB171_C4517 SM00344 helix_turn_helix ASNC type BMB171_C4524 SM01298 BMB171_C4524 BMB171_C4525 SM00479 BMB171_C4525 BMB171_C4544 SM00871 Bacterial transcription activator, effector binding domain BMB171_C4556 SM00382 ATPases associated with a variety of cellular activities BMB171_C4578 SM00422 helix_turn_helix, mercury resistance BMB171_C4583 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_C4592 SM00382 ATPases associated with a variety of cellular activities BMB171_C4596 SM00382 ATPases associated with a variety of cellular activities BMB171_C4596 SM00930 BMB171_C4596 BMB171_C4599 SM00493 BMB171_C4599 BMB171_C4610 SM00849 Metallo-beta-lactamase superfamily BMB171_C4620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C4620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C4637 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C4642 SM00448 cheY-homologous receiver domain BMB171_C4642 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4643 SM00387 Histidine kinase-like ATPases BMB171_C4643 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C4648 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C4648 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C4649 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C4649 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C4653 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_C4670 SM01276 BMB171_C4670 BMB171_C4677 SM00363 S4 RNA-binding domain BMB171_C4679 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BMB171_C4680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C4686 SM00382 ATPases associated with a variety of cellular activities BMB171_C4693 SM00382 ATPases associated with a variety of cellular activities BMB171_C4697 SM00448 cheY-homologous receiver domain BMB171_C4697 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4701 SM00316 Ribosomal protein S1-like RNA-binding domain BMB171_C4701 SM00357 Cold shock protein domain BMB171_C4701 SM00955 BMB171_C4701 BMB171_C4725 SM01192 BMB171_C4725 BMB171_C4725 SM01193 BMB171_C4725 BMB171_C4730 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMB171_C4748 SM00028 Tetratricopeptide repeats BMB171_C4755 SM00487 DEAD-like helicases superfamily BMB171_C4755 SM00490 helicase superfamily c-terminal domain BMB171_C4757 SM00422 helix_turn_helix, mercury resistance BMB171_C4764 SM00382 ATPases associated with a variety of cellular activities BMB171_C4766 SM00382 ATPases associated with a variety of cellular activities BMB171_C4768 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMB171_C4768 SM00245 tail specific protease BMB171_C4770 SM00382 ATPases associated with a variety of cellular activities BMB171_C4772 SM00937 BMB171_C4772 BMB171_C4773 SM00957 SecA DEAD-like domain BMB171_C4773 SM00958 SecA preprotein cross-linking domain BMB171_C4775 SM00382 ATPases associated with a variety of cellular activities BMB171_C4782 SM00357 Cold shock protein domain BMB171_C4784 SM00487 DEAD-like helicases superfamily BMB171_C4784 SM00490 helicase superfamily c-terminal domain BMB171_C4793 SM00984 UDP binding domain BMB171_C4796 SM00382 ATPases associated with a variety of cellular activities BMB171_C4829 SM00287 Bacterial SH3 domain homologues BMB171_C4835 SM00287 Bacterial SH3 domain homologues BMB171_C4841 SM00487 DEAD-like helicases superfamily BMB171_C4841 SM00490 helicase superfamily c-terminal domain BMB171_C4855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C4855 SM00387 Histidine kinase-like ATPases BMB171_C4855 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C4856 SM00448 cheY-homologous receiver domain BMB171_C4856 SM00862 Transcriptional regulatory protein, C terminal BMB171_C4869 SM00984 UDP binding domain BMB171_C4884 SM00382 ATPases associated with a variety of cellular activities BMB171_C4885 SM00850 LytTr DNA-binding domain BMB171_C4901 SM00052 Putative diguanylate phosphodiesterase BMB171_C4901 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BMB171_C4901 SM00091 PAS domain BMB171_C4901 SM00267 diguanylate cyclase BMB171_C4905 SM00382 ATPases associated with a variety of cellular activities BMB171_C4916 SM00226 Low molecular weight phosphatase family BMB171_C4919 SM00903 Flavin reductase like domain BMB171_C4926 SM00937 BMB171_C4926 BMB171_C4928 SM00357 Cold shock protein domain BMB171_C4928 SM00382 ATPases associated with a variety of cellular activities BMB171_C4928 SM00959 Rho termination factor, N-terminal domain BMB171_C4932 SM00448 cheY-homologous receiver domain BMB171_C4942 SM00155 Phospholipase D. Active site motifs. BMB171_C4944 SM00052 Putative diguanylate phosphodiesterase BMB171_C4944 SM00267 diguanylate cyclase BMB171_C4946 SM00530 Helix-turn-helix XRE-family like proteins BMB171_C4948 SM00421 helix_turn_helix, Lux Regulon BMB171_C4948 SM00448 cheY-homologous receiver domain BMB171_C4951 SM00382 ATPases associated with a variety of cellular activities BMB171_C4958 SM00836 DALR anticodon binding domain BMB171_C4958 SM01016 Arginyl tRNA synthetase N terminal dom BMB171_C4967 SM00422 helix_turn_helix, mercury resistance BMB171_C4974 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BMB171_C4976 SM00382 ATPases associated with a variety of cellular activities BMB171_C4984 SM00936 Penicillin-binding protein 5, C-terminal domain BMB171_C4992 SM00986 Uracil DNA glycosylase superfamily BMB171_C4992 SM00987 UreE urease accessory protein, C-terminal domain BMB171_C4994 SM00382 ATPases associated with a variety of cellular activities BMB171_C4996 SM00354 helix_turn _helix lactose operon repressor BMB171_C5003 SM00100 Cyclic nucleotide-monophosphate binding domain BMB171_C5005 SM00421 helix_turn_helix, Lux Regulon BMB171_C5005 SM00448 cheY-homologous receiver domain BMB171_C5006 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMB171_C5008 SM00267 diguanylate cyclase BMB171_C5011 SM00448 cheY-homologous receiver domain BMB171_C5011 SM00850 LytTr DNA-binding domain BMB171_C5018 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_C5028 SM00382 ATPases associated with a variety of cellular activities BMB171_C5035 SM00448 cheY-homologous receiver domain BMB171_C5035 SM00850 LytTr DNA-binding domain BMB171_C5036 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BMB171_C5036 SM00387 Histidine kinase-like ATPases BMB171_C5047 SM00487 DEAD-like helicases superfamily BMB171_C5047 SM00490 helicase superfamily c-terminal domain BMB171_C5048 SM01240 BMB171_C5048 BMB171_C5054 SM00382 ATPases associated with a variety of cellular activities BMB171_C5058 SM00382 ATPases associated with a variety of cellular activities BMB171_C5061 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BMB171_C5062 SM00849 Metallo-beta-lactamase superfamily BMB171_C5065 SM00091 PAS domain BMB171_C5065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_C5065 SM00387 Histidine kinase-like ATPases BMB171_C5065 SM00388 His Kinase A (phosphoacceptor) domain BMB171_C5066 SM00448 cheY-homologous receiver domain BMB171_C5066 SM00862 Transcriptional regulatory protein, C terminal BMB171_C5067 SM00788 Adenylosuccinate synthetase BMB171_C5070 SM00267 diguanylate cyclase BMB171_C5079 SM00470 ParB-like nuclease domain BMB171_C5081 SM00470 ParB-like nuclease domain BMB171_C5083 SM01228 BMB171_C5083 BMB171_C5085 SM00393 Putative single-stranded nucleic acids-binding domain BMB171_C5085 SM01245 BMB171_C5085 BMB171_P0008 SM00829 Enoylreductase BMB171_P0010 SM00857 Resolvase, N terminal domain BMB171_P0018 SM00857 Resolvase, N terminal domain BMB171_P0019 SM00342 helix_turn_helix, arabinose operon control protein BMB171_P0019 SM00871 Bacterial transcription activator, effector binding domain BMB171_P0023 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_P0030 SM00857 Resolvase, N terminal domain BMB171_P0059 SM00507 HNH nucleases BMB171_P0082 SM00530 Helix-turn-helix XRE-family like proteins BMB171_P0084 SM00480 DNA polymerase III beta subunit BMB171_P0101 SM00507 HNH nucleases BMB171_P0121 SM00382 ATPases associated with a variety of cellular activities BMB171_P0135 SM00530 Helix-turn-helix XRE-family like proteins BMB171_P0137 SM00382 ATPases associated with a variety of cellular activities BMB171_P0144 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BMB171_P0144 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BMB171_P0144 SM00493 BMB171_P0144 BMB171_P0145 SM00327 von Willebrand factor (vWF) type A domain BMB171_P0146 SM00966 SpoVT / AbrB like domain BMB171_P0147 SM00860 SMI1 / KNR4 family BMB171_P0154 SM00028 Tetratricopeptide repeats BMB171_P0159 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_P0161 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_P0167 SM00825 Beta-ketoacyl synthase BMB171_P0169 SM00382 ATPases associated with a variety of cellular activities BMB171_P0170 SM00823 Phosphopantetheine attachment site BMB171_P0171 SM00823 Phosphopantetheine attachment site BMB171_P0172 SM00382 ATPases associated with a variety of cellular activities BMB171_P0176 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_P0178 SM01321 BMB171_P0178 BMB171_P0180 SM00052 Putative diguanylate phosphodiesterase BMB171_P0180 SM00091 PAS domain BMB171_P0180 SM00267 diguanylate cyclase BMB171_P0194 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BMB171_P0198 SM00382 ATPases associated with a variety of cellular activities BMB171_P0200 SM00226 Low molecular weight phosphatase family BMB171_P0202 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_P0208 SM00729 Elongator protein 3, MiaB family, Radical SAM BMB171_P0209 SM00028 Tetratricopeptide repeats BMB171_P0209 SM00530 Helix-turn-helix XRE-family like proteins BMB171_P0211 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BMB171_P0212 SM01209 BMB171_P0212 BMB171_P0214 SM00347 helix_turn_helix multiple antibiotic resistance protein BMB171_P0238 SM00287 Bacterial SH3 domain homologues BMB171_P0241 SM00062 Bacterial periplasmic substrate-binding proteins BMB171_P0241 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BMB171_P0243 SM00382 ATPases associated with a variety of cellular activities BMB171_P0246 SM00448 cheY-homologous receiver domain BMB171_P0246 SM00862 Transcriptional regulatory protein, C terminal BMB171_P0247 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BMB171_P0247 SM00387 Histidine kinase-like ATPases BMB171_P0247 SM00388 His Kinase A (phosphoacceptor) domain BMB171_P0254 SM00448 cheY-homologous receiver domain BMB171_P0254 SM00862 Transcriptional regulatory protein, C terminal BMB171_P0262 SM00530 Helix-turn-helix XRE-family like proteins