locus-tag	class	description
FOC87_00015	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC87_00020	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC87_00025	COG0237	dephospho-CoA kinase activity
FOC87_00030	COG1971	Probably functions as a manganese efflux pump
FOC87_00040	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC87_00040	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC87_00045	COG5002	protein histidine kinase activity
FOC87_00050	COG0745	RESPONSE REGULATOR receiver
FOC87_00070	COG0538	isocitrate dehydrogenase activity
FOC87_00075	COG0372	Belongs to the citrate synthase family
FOC87_00085	COG0628	permease
FOC87_00090	COG3030	protein affecting phage T7 exclusion by the F plasmid
FOC87_00115	COG1725	Transcriptional regulator
FOC87_00120	COG0281	malic enzyme
FOC87_00125	COG0587	DNA-directed DNA polymerase activity
FOC87_00140	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FOC87_00155	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC87_00165	COG4109	DRTGG domain
FOC87_00180	COG0006	proline dipeptidase activity
FOC87_00225	COG0662	Cupin 2, conserved barrel domain protein
FOC87_00235	COG1476	TRANSCRIPTIONal
FOC87_00250	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_00255	COG0589	response to stress
FOC87_00295	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_00310	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOC87_00315	COG0827	DNA restriction-modification system
FOC87_00320	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FOC87_00325	COG3874	Sporulation protein YtfJ
FOC87_00340	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FOC87_00350	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC87_00365	COG1104	cysteine desulfurase activity
FOC87_00375	COG0583	DNA-binding transcription factor activity
FOC87_00380	COG0697	spore germination
FOC87_00385	COG1309	transcriptional regulator
FOC87_00390	COG1956	GAF domain-containing protein
FOC87_00395	COG0626	cystathionine gamma-synthase activity
FOC87_00445	COG1595	DNA-templated transcription, initiation
FOC87_00455	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC87_00460	COG0454	-acetyltransferase
FOC87_00465	COG0517	IMP dehydrogenase activity
FOC87_00470	COG0123	including yeast histone deacetylase and acetoin utilization protein
FOC87_00485	COG0745	RESPONSE REGULATOR receiver
FOC87_00495	COG0666	response to abiotic stimulus
FOC87_00530	COG1609	Transcriptional regulator
FOC87_00535	COG4851	CamS sex pheromone cAM373 precursor
FOC87_00540	COG3118	belongs to the thioredoxin family
FOC87_00550	COG2309	aminopeptidase activity
FOC87_00570	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC87_00585	COG1674	ftsk spoiiie
FOC87_00595	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC87_00605	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC87_00610	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FOC87_00615	COG1363	Peptidase, m42
FOC87_00625	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_00640	COG0510	thiamine kinase activity
FOC87_00645	COG1523	belongs to the glycosyl hydrolase 13 family
FOC87_00655	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC87_00660	COG1349	DNA-binding transcription factor activity
FOC87_00665	COG1187	pseudouridine synthase activity
FOC87_00670	COG2244	polysaccharide biosynthetic process
FOC87_00675	COG2081	HI0933 family
FOC87_00680	COG2814	Major facilitator Superfamily
FOC87_00690	COG3832	glyoxalase III activity
FOC87_00710	COG1329	Transcriptional regulator
FOC87_00735	COG0314	molybdopterin synthase activity
FOC87_00740	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOC87_00745	COG0303	'Molybdopterin
FOC87_00755	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC87_00760	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC87_00780	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC87_00790	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC87_00835	COG2814	Major facilitator Superfamily
FOC87_00840	COG0475	glutathione-regulated potassium exporter activity
FOC87_00845	COG0490	domain, Protein
FOC87_00850	COG0582	viral genome integration into host DNA
FOC87_00860	COG1136	(ABC) transporter
FOC87_00880	COG1242	4 iron, 4 sulfur cluster binding
FOC87_00885	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FOC87_00900	COG1794	racemase activity, acting on amino acids and derivatives
FOC87_00910	COG5504	Zn-dependent protease
FOC87_00935	COG2267	carboxylic ester hydrolase activity
FOC87_00940	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOC87_00945	COG0671	phosphoesterase, PA-phosphatase related
FOC87_00950	COG0438	transferase activity, transferring glycosyl groups
FOC87_00960	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC87_01025	COG0546	phosphoglycolate phosphatase activity
FOC87_01030	COG1349	DNA-binding transcription factor activity
FOC87_01040	COG5002	protein histidine kinase activity
FOC87_01045	COG4191	Histidine kinase
FOC87_01050	COG2267	carboxylic ester hydrolase activity
FOC87_01055	COG1368	sulfuric ester hydrolase activity
FOC87_01070	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC87_01075	COG1116	anion transmembrane transporter activity
FOC87_01080	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC87_01095	COG0546	phosphoglycolate phosphatase activity
FOC87_01105	COG0494	nUDIX hydrolase
FOC87_01140	COG0288	reversible hydration of carbon dioxide
FOC87_01145	COG1271	oxidase subunit
FOC87_01150	COG1294	oxidase, subunit
FOC87_01170	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_01195	COG1842	Phage shock protein A
FOC87_01255	COG3859	Proton-coupled thiamine transporter YuaJ
FOC87_01260	COG5002	protein histidine kinase activity
FOC87_01265	COG0745	RESPONSE REGULATOR receiver
FOC87_01295	COG1597	lipid kinase activity
FOC87_01325	COG0586	Pfam SNARE associated Golgi protein
FOC87_01335	COG4977	sequence-specific DNA binding
FOC87_01345	COG0577	efflux transmembrane transporter activity
FOC87_01350	COG1136	(ABC) transporter
FOC87_01355	COG2207	Transcriptional regulator
FOC87_01355	COG3708	Transcriptional regulator
FOC87_01360	COG0745	RESPONSE REGULATOR receiver
FOC87_01365	COG2205	protein histidine kinase activity
FOC87_01370	COG0577	efflux transmembrane transporter activity
FOC87_01375	COG0577	efflux transmembrane transporter activity
FOC87_01380	COG1136	(ABC) transporter
FOC87_01385	COG0577	efflux transmembrane transporter activity
FOC87_01400	COG2188	Transcriptional regulator
FOC87_01420	COG3964	amidohydrolase
FOC87_01440	COG4948	Mandelate Racemase Muconate Lactonizing
FOC87_01450	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC87_01455	COG0596	Alpha beta hydrolase
FOC87_01465	COG1169	isochorismate synthase
FOC87_01470	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC87_01475	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOC87_01495	COG0058	SHG alpha-glucan phosphorylase activity
FOC87_01505	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOC87_01525	COG1404	Belongs to the peptidase S8 family
FOC87_01625	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOC87_01660	COG1285	pathogenesis
FOC87_01665	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC87_01680	COG2155	Conserved Protein
FOC87_01685	COG1098	S1 RNA binding domain
FOC87_01690	COG0436	Aminotransferase
FOC87_01695	COG1522	sequence-specific DNA binding
FOC87_01700	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC87_01705	COG2267	carboxylic ester hydrolase activity
FOC87_01715	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOC87_01735	COG5018	Exonuclease
FOC87_01740	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC87_01760	COG2050	protein possibly involved in aromatic compounds catabolism
FOC87_01770	COG1268	BioY protein
FOC87_01775	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC87_01780	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOC87_01795	COG3584	3D domain protein
FOC87_01810	COG1252	NADH dehydrogenase
FOC87_01825	COG3708	Transcriptional regulator
FOC87_01840	COG1683	Conserved Protein
FOC87_01850	COG0316	Belongs to the HesB IscA family
FOC87_01865	COG1252	NADH dehydrogenase
FOC87_01875	COG2274	protein secretion by the type I secretion system
FOC87_01880	COG0390	transport system, permease component
FOC87_01885	COG2824	Alkylphosphonate utilization operon protein PhnA
FOC87_01905	COG4837	Protein of unknown function (DUF1462)
FOC87_01910	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FOC87_01920	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC87_01925	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FOC87_01940	COG1136	(ABC) transporter
FOC87_01940	COG0577	efflux transmembrane transporter activity
FOC87_01945	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC87_01950	COG0647	UMP catabolic process
FOC87_01960	COG2445	Protein of unknown function DUF86
FOC87_01965	COG1494	fructose-1,6-bisphosphatase
FOC87_01980	COG4470	Protein conserved in bacteria
FOC87_01990	COG0789	Transcriptional regulator
FOC87_01995	COG4377	Putative membrane peptidase family (DUF2324)
FOC87_02020	COG0739	heme binding
FOC87_02030	COG3377	Domain of unknown function (DUF1805)
FOC87_02035	COG0737	Belongs to the 5'-nucleotidase family
FOC87_02040	COG1695	Transcriptional regulator
FOC87_02050	COG0719	Fe-S assembly protein
FOC87_02055	COG0822	iron-sulfur transferase activity
FOC87_02060	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC87_02065	COG0719	Fe-S assembly protein
FOC87_02070	COG0396	ATPase activity
FOC87_02075	COG1464	Belongs to the NlpA lipoprotein family
FOC87_02080	COG1464	Belongs to the NlpA lipoprotein family
FOC87_02085	COG2011	ABC-type metal ion transport system permease component
FOC87_02090	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC87_02100	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC87_02105	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOC87_02115	COG1393	Belongs to the ArsC family
FOC87_02160	COG0039	L-malate dehydrogenase activity
FOC87_02185	COG1396	sequence-specific DNA binding
FOC87_02190	COG1309	transcriptional regulator
FOC87_02195	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_02205	COG4555	ABC transporter
FOC87_02230	COG1960	acyl-CoA dehydrogenase activity
FOC87_02235	COG0183	Belongs to the thiolase family
FOC87_02240	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC87_02240	COG1024	Enoyl-CoA hydratase
FOC87_02250	COG1686	Belongs to the peptidase S11 family
FOC87_02265	COG0011	TIGRFAM Protein of
FOC87_02270	COG0840	transmembrane signaling receptor activity
FOC87_02290	COG2814	Major facilitator Superfamily
FOC87_02295	COG0531	amino acid
FOC87_02310	COG0706	membrane insertase activity
FOC87_02320	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_02355	COG0586	Pfam SNARE associated Golgi protein
FOC87_02365	COG1376	ErfK ybiS ycfS ynhG family protein
FOC87_02370	COG0745	RESPONSE REGULATOR receiver
FOC87_02375	COG5002	protein histidine kinase activity
FOC87_02400	COG0840	transmembrane signaling receptor activity
FOC87_02405	COG2151	metal-sulfur cluster biosynthetic enzyme
FOC87_02410	COG3227	Zinc metalloprotease (Elastase)
FOC87_02415	COG1741	Belongs to the pirin family
FOC87_02430	COG0475	glutathione-regulated potassium exporter activity
FOC87_02435	COG0490	domain, Protein
FOC87_02440	COG1115	amino acid carrier protein
FOC87_02445	COG0783	Belongs to the Dps family
FOC87_02460	COG1611	Belongs to the LOG family
FOC87_02480	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC87_02485	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC87_02490	COG1115	amino acid carrier protein
FOC87_02495	COG1115	amino acid carrier protein
FOC87_02500	COG2910	NAD(P)H-binding
FOC87_02515	COG0656	L-ascorbic acid biosynthetic process
FOC87_02520	COG2814	Major facilitator Superfamily
FOC87_02525	COG1733	regulation of RNA biosynthetic process
FOC87_02535	COG1252	NADH dehydrogenase
FOC87_02540	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOC87_02565	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOC87_02590	COG0488	(ABC) transporter
FOC87_02595	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC87_02650	COG0557	exoribonuclease II activity
FOC87_02655	COG1647	Serine aminopeptidase, S33
FOC87_02660	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC87_02665	COG1346	cytolysis
FOC87_02700	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC87_02715	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC87_02740	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC87_02755	COG2323	membrane
FOC87_02765	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC87_02775	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FOC87_02785	COG1051	belongs to the nudix hydrolase family
FOC87_02795	COG0492	ferredoxin-NADP+ reductase activity
FOC87_02800	COG0457	Tetratricopeptide repeat
FOC87_02805	COG0110	maltose O-acetyltransferase activity
FOC87_02825	COG1950	PFAM Membrane protein of
FOC87_02875	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC87_02880	COG0556	nucleotide-excision repair
FOC87_02895	COG0789	Transcriptional regulator
FOC87_02920	COG2855	membrane
FOC87_02925	COG0583	DNA-binding transcription factor activity
FOC87_02935	COG0655	NAD(P)H dehydrogenase (quinone) activity
FOC87_02940	COG0488	(ABC) transporter
FOC87_02950	COG1132	(ABC) transporter
FOC87_02955	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC87_02960	COG3409	Peptidoglycan-binding domain 1 protein
FOC87_02960	COG0793	Belongs to the peptidase S41A family
FOC87_02965	COG2177	Part of the ABC transporter FtsEX involved in
FOC87_02970	COG2884	Cell division ATP-binding protein ftsE
FOC87_02990	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOC87_02995	COG1278	Cold shock
FOC87_03000	COG1040	competence protein
FOC87_03005	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
FOC87_03010	COG0791	NLP P60 protein
FOC87_03010	COG1388	LysM domain
FOC87_03015	COG1733	regulation of RNA biosynthetic process
FOC87_03020	COG1307	EDD domain protein, DegV family
FOC87_03025	COG1739	Uncharacterized protein family UPF0029
FOC87_03030	COG1316	TRANSCRIPTIONal
FOC87_03035	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC87_03040	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FOC87_03045	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC87_03055	COG3933	PFAM sigma-54 factor interaction domain-containing protein
FOC87_03055	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOC87_03075	COG1486	melibiose metabolic process
FOC87_03080	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC87_03085	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC87_03095	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC87_03115	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC87_03125	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC87_03130	COG1301	dicarboxylic acid transport
FOC87_03140	COG0346	lactoylglutathione lyase activity
FOC87_03160	COG1511	domain protein
FOC87_03165	COG0583	DNA-binding transcription factor activity
FOC87_03170	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FOC87_03180	COG1271	oxidase subunit
FOC87_03185	COG1294	oxidase, subunit
FOC87_03190	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC87_03200	COG1620	l-lactate permease
FOC87_03215	COG2389	metal-binding protein
FOC87_03225	COG1368	sulfuric ester hydrolase activity
FOC87_03235	COG1388	LysM domain
FOC87_03235	COG0791	NLP P60 protein
FOC87_03240	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC87_03250	COG1215	transferase activity, transferring glycosyl groups
FOC87_03255	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC87_03260	COG3584	3D domain protein
FOC87_03260	COG1388	LysM domain
FOC87_03285	COG4715	Zinc finger, swim domain protein
FOC87_03290	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC87_03335	COG0577	efflux transmembrane transporter activity
FOC87_03340	COG1136	(ABC) transporter
FOC87_03380	COG0745	RESPONSE REGULATOR receiver
FOC87_03385	COG1482	cell wall glycoprotein biosynthetic process
FOC87_03390	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC87_03390	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC87_03390	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC87_03395	COG3711	transcriptional antiterminator
FOC87_03395	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC87_03400	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC87_03415	COG1482	cell wall glycoprotein biosynthetic process
FOC87_03420	COG0662	Cupin 2, conserved barrel domain protein
FOC87_03420	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
FOC87_03425	COG0438	transferase activity, transferring glycosyl groups
FOC87_03435	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FOC87_03450	COG2244	polysaccharide biosynthetic process
FOC87_03455	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOC87_03460	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC87_03465	COG4464	protein tyrosine phosphatase activity
FOC87_03470	COG0489	protein tyrosine kinase activity
FOC87_03475	COG3944	biosynthesis protein
FOC87_03480	COG0489	protein tyrosine kinase activity
FOC87_03495	COG1609	Transcriptional regulator
FOC87_03505	COG0739	heme binding
FOC87_03520	COG3279	Response regulator of the LytR AlgR family
FOC87_03525	COG2385	sporulation resulting in formation of a cellular spore
FOC87_03540	COG4836	Membrane
FOC87_03545	COG1007	ATP synthesis coupled electron transport
FOC87_03550	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC87_03555	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC87_03565	COG0839	Belongs to the complex I subunit 6 family
FOC87_03585	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC87_03600	COG5001	Diguanylate cyclase
FOC87_03600	COG3300	MHYT domain
FOC87_03650	COG0356	it plays a direct role in the translocation of protons across the membrane
FOC87_03685	COG0698	ribose 5-phosphate isomerase
FOC87_03695	COG2190	(PTS) system
FOC87_03700	COG2259	Doxx family
FOC87_03705	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC87_03720	COG0009	L-threonylcarbamoyladenylate synthase
FOC87_03735	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC87_03755	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOC87_03760	COG1494	fructose-1,6-bisphosphatase
FOC87_03780	COG4821	SIS domain
FOC87_03800	COG1960	acyl-CoA dehydrogenase activity
FOC87_03805	COG1960	acyl-CoA dehydrogenase activity
FOC87_03810	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC87_03815	COG0183	Belongs to the thiolase family
FOC87_03820	COG2181	nitrate reductase activity
FOC87_03820	COG0247	lactate metabolic process
FOC87_03825	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC87_03835	COG3300	MHYT domain
FOC87_03835	COG5001	Diguanylate cyclase
FOC87_03855	COG2197	response regulator
FOC87_03860	COG4585	Histidine kinase
FOC87_03865	COG0842	Transport permease protein
FOC87_03870	COG1131	(ABC) transporter
FOC87_03875	COG0024	Methionine aminopeptidase
FOC87_03885	COG2234	aminopeptidase activity
FOC87_03905	COG1595	DNA-templated transcription, initiation
FOC87_03915	COG4506	Protein conserved in bacteria
FOC87_03920	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC87_03935	COG0010	Belongs to the arginase family
FOC87_03945	COG2814	Major facilitator Superfamily
FOC87_03950	COG0789	Transcriptional regulator
FOC87_03955	COG0584	glycerophosphoryl diester phosphodiesterase
FOC87_03960	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC87_03970	COG1994	Peptidase M50
FOC87_03980	COG1078	dGTPase activity
FOC87_03985	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC87_03990	COG1120	ATPase activity
FOC87_03995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_04000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_04020	COG0095	Lipoate-protein ligase
FOC87_04025	COG0280	phosphate acetyltransferase
FOC87_04040	COG3773	Cell wall hydrolase
FOC87_04050	COG2363	Small membrane protein
FOC87_04060	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC87_04065	COG2233	PERMEase
FOC87_04070	COG0561	phosphatase activity
FOC87_04075	COG2814	Major facilitator Superfamily
FOC87_04085	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC87_04090	COG1131	(ABC) transporter
FOC87_04095	COG2755	lipolytic protein G-D-S-L family
FOC87_04100	COG1609	Transcriptional regulator
FOC87_04110	COG0460	homoserine dehydrogenase
FOC87_04120	COG2873	o-acetylhomoserine
FOC87_04125	COG1011	Hydrolase
FOC87_04130	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC87_04140	COG2197	response regulator
FOC87_04145	COG4585	Histidine kinase
FOC87_04145	COG2203	Gaf domain
FOC87_04150	COG0351	phosphomethylpyrimidine kinase
FOC87_04155	COG3706	GGDEF domain
FOC87_04160	COG2879	small protein
FOC87_04165	COG1966	Carbon starvation protein
FOC87_04170	COG3279	Response regulator of the LytR AlgR family
FOC87_04175	COG0477	Major facilitator Superfamily
FOC87_04200	COG0840	transmembrane signaling receptor activity
FOC87_04210	COG1607	acyl-coa hydrolase
FOC87_04225	COG0488	(ABC) transporter
FOC87_04245	COG0463	Glycosyl transferase, family 2
FOC87_04250	COG1309	transcriptional regulator
FOC87_04255	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC87_04260	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC87_04260	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC87_04265	COG0628	permease
FOC87_04280	COG3279	Response regulator of the LytR AlgR family
FOC87_04285	COG3275	phosphorelay sensor kinase activity
FOC87_04290	COG2814	Major facilitator Superfamily
FOC87_04295	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC87_04300	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
FOC87_04305	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC87_04325	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC87_04330	COG1272	protein, Hemolysin III
FOC87_04355	COG1164	Oligoendopeptidase f
FOC87_04375	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC87_04380	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FOC87_04385	COG4853	Protein conserved in bacteria
FOC87_04390	COG4863	YycH protein
FOC87_04395	COG5002	protein histidine kinase activity
FOC87_04400	COG0745	RESPONSE REGULATOR receiver
FOC87_04430	COG0305	Participates in initiation and elongation during chromosome replication
FOC87_04440	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
FOC87_04445	COG4241	membrane
FOC87_04455	COG0629	single-stranded DNA binding
FOC87_04465	COG0012	GTP binding
FOC87_04470	COG4481	Protein conserved in bacteria
FOC87_04475	COG0668	transmembrane transport
FOC87_04485	COG1475	DNA binding
FOC87_04490	COG1192	Involved in chromosome partitioning
FOC87_04515	COG1847	R3H domain protein
FOC87_04520	COG0706	membrane insertase activity
FOC87_04530	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FOC87_04540	COG0592	DNA-directed DNA polymerase activity
FOC87_04545	COG2501	S4 domain
FOC87_04555	COG0187	DNA topoisomerase II activity
FOC87_04560	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC87_04595	COG0516	GMP reductase activity
FOC87_04595	COG0517	IMP dehydrogenase activity
FOC87_04600	COG1686	Belongs to the peptidase S11 family
FOC87_04630	COG1428	Deoxynucleoside kinase
FOC87_04635	COG1428	Deoxynucleoside kinase
FOC87_04640	COG1335	isochorismatase
FOC87_04645	COG0590	tRNA wobble adenosine to inosine editing
FOC87_04655	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC87_04710	COG1982	Orn Lys Arg decarboxylase major
FOC87_04720	COG0470	DNA polymerase III
FOC87_04725	COG1774	PSP1 C-terminal conserved region
FOC87_04735	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FOC87_04745	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FOC87_04750	COG2002	toxin-antitoxin pair type II binding
FOC87_04755	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC87_04755	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC87_04760	COG0084	hydrolase, TatD family'
FOC87_04765	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOC87_04780	COG4466	Protein conserved in bacteria
FOC87_04795	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOC87_04800	COG0251	oxidation-reduction process
FOC87_04830	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOC87_04835	COG2002	toxin-antitoxin pair type II binding
FOC87_04840	COG2244	polysaccharide biosynthetic process
FOC87_04845	COG3956	TIGRFAM MazG family protein
FOC87_04850	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FOC87_04870	COG1098	S1 RNA binding domain
FOC87_04885	COG2208	phosphoserine phosphatase activity
FOC87_04900	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC87_04915	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC87_04920	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FOC87_04925	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC87_04930	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC87_04935	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FOC87_04940	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOC87_04945	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FOC87_04950	COG1396	sequence-specific DNA binding
FOC87_04955	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC87_05045	COG3880	PFAM UvrB UvrC protein
FOC87_05055	COG0542	response to heat
FOC87_05060	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FOC87_05070	COG4956	integral membrane protein (PIN domain superfamily)
FOC87_05090	COG1045	serine acetyltransferase
FOC87_05105	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC87_05110	COG3688	RNA-binding protein containing a PIN domain
FOC87_05125	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC87_05130	COG0250	Participates in transcription elongation, termination and antitermination
FOC87_05135	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FOC87_05155	COG2813	Specifically methylates the guanine in position
FOC87_05170	COG1358	cellular component organization or biogenesis
FOC87_05240	COG0255	Belongs to the universal ribosomal protein uL29 family
FOC87_05300	COG0201	protein transport
FOC87_05310	COG0024	Methionine aminopeptidase
FOC87_05320	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOC87_05355	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC87_05380	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC87_05385	COG0489	protein tyrosine kinase activity
FOC87_05395	COG2194	sulfuric ester hydrolase activity
FOC87_05400	COG0726	polysaccharide deacetylase
FOC87_05480	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
FOC87_05485	COG4856	YbbR-like protein
FOC87_05530	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FOC87_05535	COG0823	Involved in the tonB-independent uptake of proteins
FOC87_05535	COG4946	Tricorn protease homolog
FOC87_05535	COG1506	peptidase
FOC87_05575	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_05580	COG2011	ABC-type metal ion transport system permease component
FOC87_05585	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC87_05590	COG1464	Belongs to the NlpA lipoprotein family
FOC87_05595	COG0604	alcohol dehydrogenase
FOC87_05605	COG0277	FAD linked oxidase domain protein
FOC87_05610	COG2271	Major facilitator Superfamily
FOC87_05620	COG2814	Major facilitator Superfamily
FOC87_05635	COG0601	transmembrane transport
FOC87_05640	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC87_05645	COG0444	Belongs to the ABC transporter superfamily
FOC87_05650	COG4608	Belongs to the ABC transporter superfamily
FOC87_05655	COG4166	transmembrane transport
FOC87_05665	COG2207	Transcriptional regulator
FOC87_05675	COG1309	transcriptional regulator
FOC87_05685	COG4166	transmembrane transport
FOC87_05690	COG4166	transmembrane transport
FOC87_05695	COG0656	L-ascorbic acid biosynthetic process
FOC87_05700	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC87_05715	COG4149	molybdate abc transporter
FOC87_05720	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOC87_05725	COG1910	domain protein
FOC87_05740	COG0697	spore germination
FOC87_05755	COG0204	Acyl-transferase
FOC87_05765	COG1609	Transcriptional regulator
FOC87_05775	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_05785	COG0084	hydrolase, TatD family'
FOC87_05795	COG5298	Protein conserved in bacteria
FOC87_05820	COG0488	(ABC) transporter
FOC87_05835	COG0747	negative chemotaxis
FOC87_05840	COG0601	transmembrane transport
FOC87_05850	COG0444	Belongs to the ABC transporter superfamily
FOC87_05855	COG4608	Belongs to the ABC transporter superfamily
FOC87_05860	COG0561	phosphatase activity
FOC87_05890	COG3185	4-Hydroxyphenylpyruvate dioxygenase
FOC87_05895	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC87_05905	COG0531	amino acid
FOC87_05910	COG2814	Major facilitator Superfamily
FOC87_05920	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOC87_05930	COG4294	response to UV
FOC87_05935	COG0457	Tetratricopeptide repeat
FOC87_05935	COG0705	Rhomboid family
FOC87_05945	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOC87_05950	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC87_05955	COG0864	Transcriptional regulator
FOC87_05960	COG2337	Toxic component of a toxin-antitoxin (TA) module
FOC87_05965	COG2183	response to ionizing radiation
FOC87_06060	COG0802	atpase or kinase
FOC87_06065	COG1214	PFAM Peptidase M22, glycoprotease
FOC87_06070	COG0456	acetyltransferase
FOC87_06080	COG0488	(ABC) transporter
FOC87_06095	COG1266	CAAX protease self-immunity
FOC87_06110	COG5444	nuclease activity
FOC87_06130	COG0582	viral genome integration into host DNA
FOC87_06170	COG2252	PERMEase
FOC87_06180	COG5002	protein histidine kinase activity
FOC87_06205	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FOC87_06275	COG2205	protein histidine kinase activity
FOC87_06280	COG0745	RESPONSE REGULATOR receiver
FOC87_06300	COG0697	spore germination
FOC87_06325	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOC87_06330	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOC87_06335	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOC87_06345	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOC87_06360	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FOC87_06370	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOC87_06380	COG0151	Belongs to the GarS family
FOC87_06405	COG0210	DNA helicase
FOC87_06415	COG4851	CamS sex pheromone cAM373 precursor
FOC87_06435	COG1335	isochorismatase
FOC87_06440	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC87_06445	COG2011	ABC-type metal ion transport system permease component
FOC87_06450	COG1464	Belongs to the NlpA lipoprotein family
FOC87_06475	COG0003	Pfam Anion-transporting ATPase
FOC87_06480	COG1846	Transcriptional regulator
FOC87_06485	COG4682	membrane
FOC87_06505	COG1597	lipid kinase activity
FOC87_06510	COG0546	phosphoglycolate phosphatase activity
FOC87_06515	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC87_06525	COG1012	belongs to the aldehyde dehydrogenase family
FOC87_06530	COG2076	Multidrug Resistance protein
FOC87_06535	COG2309	aminopeptidase activity
FOC87_06550	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC87_06555	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC87_06560	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC87_06565	COG5002	protein histidine kinase activity
FOC87_06570	COG4807	Protein conserved in bacteria
FOC87_06600	COG1473	amidohydrolase
FOC87_06615	COG0450	alkyl hydroperoxide reductase
FOC87_06635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_06640	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_06645	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC87_06660	COG0166	Belongs to the GPI family
FOC87_06690	COG5002	protein histidine kinase activity
FOC87_06710	COG3541	Predicted nucleotidyltransferase
FOC87_06715	COG2814	Major facilitator Superfamily
FOC87_06720	COG0723	plastoquinol--plastocyanin reductase activity
FOC87_06720	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC87_06730	COG0765	amino acid transport
FOC87_06735	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC87_06745	COG0840	transmembrane signaling receptor activity
FOC87_06770	COG0549	Belongs to the carbamate kinase family
FOC87_06790	COG0366	Alpha amylase catalytic
FOC87_06795	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC87_06795	COG2190	(PTS) system
FOC87_06795	COG1263	PTS System
FOC87_06825	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOC87_06840	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC87_06850	COG1116	anion transmembrane transporter activity
FOC87_06905	COG2270	Major facilitator Superfamily
FOC87_06935	COG2310	stress, protein
FOC87_06940	COG2310	stress, protein
FOC87_06945	COG2310	stress, protein
FOC87_06950	COG0861	Integral membrane protein TerC family
FOC87_06960	COG3853	Toxic anion resistance protein (TelA)
FOC87_06975	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOC87_06985	COG1295	ribonuclease BN
FOC87_06990	COG2217	Heavy metal translocating P-type atpase
FOC87_06995	COG0697	spore germination
FOC87_07015	COG0586	Pfam SNARE associated Golgi protein
FOC87_07030	COG3871	stress protein (general stress protein 26)
FOC87_07035	COG0387	Pfam Sodium calcium exchanger
FOC87_07045	COG0535	radical SAM domain protein
FOC87_07065	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC87_07085	COG3829	transcription factor binding
FOC87_07095	COG0833	amino acid
FOC87_07100	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC87_07130	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC87_07130	COG1263	PTS System
FOC87_07135	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC87_07150	COG0463	Glycosyl transferase, family 2
FOC87_07160	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC87_07160	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOC87_07180	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOC87_07200	COG1228	amidohydrolase
FOC87_07205	COG1090	epimerase
FOC87_07235	COG1988	membrane-bound metal-dependent
FOC87_07240	COG1194	a g-specific adenine glycosylase
FOC87_07265	COG1132	(ABC) transporter
FOC87_07270	COG4129	membrane
FOC87_07275	COG0070	glutamate synthase
FOC87_07275	COG0069	glutamate synthase activity
FOC87_07275	COG0067	glutamate synthase
FOC87_07285	COG4555	ABC transporter
FOC87_07305	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC87_07310	COG0735	belongs to the Fur family
FOC87_07445	COG1132	(ABC) transporter
FOC87_07460	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FOC87_07465	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOC87_07480	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOC87_07490	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOC87_07495	COG1716	ATPase activity
FOC87_07495	COG5001	Diguanylate cyclase
FOC87_07500	COG2766	serine protein kinase
FOC87_07520	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC87_07530	COG1585	Membrane protein implicated in regulation of membrane protease activity
FOC87_07535	COG2268	Band 7 protein
FOC87_07545	COG3290	protein histidine kinase activity
FOC87_07550	COG4565	transcriptional regulatory protein
FOC87_07555	COG2851	Citrate transporter
FOC87_07575	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC87_07580	COG3842	ATPase activity
FOC87_07585	COG1175	transmembrane transport
FOC87_07590	COG0395	ABC-type sugar transport system, permease component
FOC87_07600	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC87_07605	COG0745	RESPONSE REGULATOR receiver
FOC87_07610	COG5002	protein histidine kinase activity
FOC87_07620	COG4990	cell redox homeostasis
FOC87_07630	COG3290	protein histidine kinase activity
FOC87_07635	COG4565	transcriptional regulatory protein
FOC87_07640	COG3493	citrate carrier protein
FOC87_07645	COG0281	malic enzyme
FOC87_07660	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_07670	COG5002	protein histidine kinase activity
FOC87_07675	COG0745	RESPONSE REGULATOR receiver
FOC87_07680	COG0454	-acetyltransferase
FOC87_07680	COG0456	acetyltransferase
FOC87_07685	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC87_07690	COG3383	formate dehydrogenase (NAD+) activity
FOC87_07695	COG2427	Protein of unknown function (DUF1641)
FOC87_07710	COG0531	amino acid
FOC87_07715	COG0640	Transcriptional regulator
FOC87_07720	COG2217	Heavy metal translocating P-type atpase
FOC87_07725	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOC87_07740	COG3227	Zinc metalloprotease (Elastase)
FOC87_07760	COG2720	vancomycin resistance protein
FOC87_07765	COG1316	TRANSCRIPTIONal
FOC87_07770	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC87_07775	COG0346	lactoylglutathione lyase activity
FOC87_07780	COG1253	flavin adenine dinucleotide binding
FOC87_07785	COG1027	Aspartate ammonia-lyase
FOC87_07790	COG1620	l-lactate permease
FOC87_07805	COG3104	oligopeptide transport
FOC87_07810	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC87_07815	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_07820	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_07830	COG2226	methyltransferase
FOC87_07835	COG0156	8-amino-7-oxononanoate synthase activity
FOC87_07840	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC87_07850	COG4548	von Willebrand factor, type A
FOC87_07855	COG0714	Associated with various cellular activities
FOC87_07860	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC87_07875	COG0531	amino acid
FOC87_07880	COG2188	Transcriptional regulator
FOC87_07885	COG1263	PTS System
FOC87_07885	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC87_07890	COG0366	Alpha amylase catalytic
FOC87_07905	COG0697	spore germination
FOC87_07910	COG4585	Histidine kinase
FOC87_07915	COG2197	response regulator
FOC87_07920	COG1404	Belongs to the peptidase S8 family
FOC87_07935	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC87_07940	COG1115	amino acid carrier protein
FOC87_07945	COG1126	abc transporter atp-binding protein
FOC87_07950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC87_07955	COG0765	amino acid transport
FOC87_07960	COG0765	amino acid transport
FOC87_07965	COG0833	amino acid
FOC87_07990	COG2378	regulation of single-species biofilm formation
FOC87_07995	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FOC87_08000	COG5002	protein histidine kinase activity
FOC87_08015	COG0659	secondary active sulfate transmembrane transporter activity
FOC87_08030	COG0747	negative chemotaxis
FOC87_08040	COG0601	transmembrane transport
FOC87_08045	COG4608	Belongs to the ABC transporter superfamily
FOC87_08055	COG2271	Major facilitator Superfamily
FOC87_08060	COG1846	Transcriptional regulator
FOC87_08065	COG0477	Major facilitator Superfamily
FOC87_08070	COG1609	Transcriptional regulator
FOC87_08075	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC87_08090	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC87_08095	COG1879	ABC-type sugar transport system periplasmic component
FOC87_08115	COG1063	alcohol dehydrogenase
FOC87_08130	COG3568	Endonuclease Exonuclease Phosphatase
FOC87_08160	COG0840	transmembrane signaling receptor activity
FOC87_08165	COG1388	LysM domain
FOC87_08165	COG3584	3D domain protein
FOC87_08170	COG1476	TRANSCRIPTIONal
FOC87_08185	COG3104	oligopeptide transport
FOC87_08190	COG1114	Component of the transport system for branched-chain amino acids
FOC87_08205	COG1113	amino acid transport
FOC87_08210	COG2252	PERMEase
FOC87_08225	COG2153	protein acetylation
FOC87_08235	COG0475	glutathione-regulated potassium exporter activity
FOC87_08235	COG0569	domain protein
FOC87_08250	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC87_08255	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOC87_08260	COG4990	cell redox homeostasis
FOC87_08275	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC87_08280	COG0697	spore germination
FOC87_08285	COG0531	amino acid
FOC87_08295	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC87_08300	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC87_08305	COG1918	ferrous iron import across plasma membrane
FOC87_08305	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC87_08310	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC87_08315	COG0573	inorganic phosphate transmembrane transporter activity
FOC87_08320	COG0581	inorganic phosphate transmembrane transporter activity
FOC87_08330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC87_08450	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
FOC87_08470	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC87_08475	COG1116	anion transmembrane transporter activity
FOC87_08480	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC87_08485	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC87_08490	COG0352	thiamine-phosphate diphosphorylase activity
FOC87_08495	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC87_08500	COG2104	thiamine diphosphate biosynthetic process
FOC87_08510	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC87_08515	COG0351	phosphomethylpyrimidine kinase
FOC87_08555	COG2205	protein histidine kinase activity
FOC87_08560	COG2814	Major facilitator Superfamily
FOC87_08565	COG1846	Transcriptional regulator
FOC87_08590	COG1136	(ABC) transporter
FOC87_08590	COG0577	efflux transmembrane transporter activity
FOC87_08600	COG2252	PERMEase
FOC87_08605	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_08620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC87_08625	COG1621	beta-fructofuranosidase activity
FOC87_08630	COG1263	PTS System
FOC87_08630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC87_08635	COG1609	Transcriptional regulator
FOC87_08645	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC87_08685	COG0778	Nitroreductase
FOC87_08690	COG2719	SpoVR family
FOC87_08695	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC87_08700	COG1937	Protein conserved in bacteria
FOC87_08705	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC87_08705	COG0425	Belongs to the sulfur carrier protein TusA family
FOC87_08710	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_08710	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC87_08715	COG0425	Belongs to the sulfur carrier protein TusA family
FOC87_08720	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC87_08730	COG2210	Belongs to the sulfur carrier protein TusA family
FOC87_08735	COG0730	response to heat
FOC87_08745	COG1316	TRANSCRIPTIONal
FOC87_08750	COG0604	alcohol dehydrogenase
FOC87_08755	COG1283	sodium-dependent phosphate transmembrane transporter activity
FOC87_08770	COG3711	transcriptional antiterminator
FOC87_08770	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC87_08775	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC87_08780	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC87_08800	COG3584	3D domain protein
FOC87_08800	COG1388	LysM domain
FOC87_08805	COG0577	efflux transmembrane transporter activity
FOC87_08810	COG1136	(ABC) transporter
FOC87_08820	COG5522	Integral membrane protein (intg_mem_TP0381)
FOC87_08835	COG0577	efflux transmembrane transporter activity
FOC87_08840	COG1114	Component of the transport system for branched-chain amino acids
FOC87_08845	COG3546	catalase activity
FOC87_08880	COG0586	Pfam SNARE associated Golgi protein
FOC87_08915	COG0531	amino acid
FOC87_08920	COG0475	glutathione-regulated potassium exporter activity
FOC87_08930	COG1737	Transcriptional regulator
FOC87_08940	COG1263	PTS System
FOC87_08940	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC87_08955	COG2259	Doxx family
FOC87_08975	COG1522	sequence-specific DNA binding
FOC87_08990	COG2076	Multidrug Resistance protein
FOC87_08995	COG1309	transcriptional regulator
FOC87_09000	COG2814	Major facilitator Superfamily
FOC87_09005	COG4533	DNA binding
FOC87_09010	COG2211	Major facilitator Superfamily
FOC87_09020	COG0693	protein deglycase activity
FOC87_09025	COG0753	catalase activity
FOC87_09025	COG0693	protein deglycase activity
FOC87_09035	COG0531	amino acid
FOC87_09050	COG1012	belongs to the aldehyde dehydrogenase family
FOC87_09055	COG1132	(ABC) transporter
FOC87_09060	COG1132	(ABC) transporter
FOC87_09065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC87_09070	COG0765	amino acid transport
FOC87_09075	COG1126	abc transporter atp-binding protein
FOC87_09090	COG0189	ligase activity
FOC87_09120	COG0028	Belongs to the TPP enzyme family
FOC87_09125	COG3527	Alpha-acetolactate decarboxylase
FOC87_09135	COG0561	phosphatase activity
FOC87_09140	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC87_09140	COG3409	Peptidoglycan-binding domain 1 protein
FOC87_09145	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC87_09160	COG0659	secondary active sulfate transmembrane transporter activity
FOC87_09190	COG2244	polysaccharide biosynthetic process
FOC87_09200	COG4196	transglutaminase domain protein
FOC87_09205	COG4196	transglutaminase domain protein
FOC87_09225	COG1024	Enoyl-CoA hydratase
FOC87_09245	COG1363	Peptidase, m42
FOC87_09265	COG3938	Belongs to the proline racemase family
FOC87_09285	COG0601	transmembrane transport
FOC87_09290	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC87_09295	COG0444	Belongs to the ABC transporter superfamily
FOC87_09300	COG4608	Belongs to the ABC transporter superfamily
FOC87_09345	COG0477	Major facilitator Superfamily
FOC87_09350	COG3290	protein histidine kinase activity
FOC87_09355	COG4565	transcriptional regulatory protein
FOC87_09360	COG3181	Tripartite tricarboxylate transporter family receptor
FOC87_09415	COG0305	Participates in initiation and elongation during chromosome replication
FOC87_09435	COG0477	Major facilitator Superfamily
FOC87_09495	COG3320	Male sterility
FOC87_09495	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC87_09500	COG1309	transcriptional regulator
FOC87_09515	COG1183	phosphatidylcholine synthase activity
FOC87_09545	COG2376	Dihydroxyacetone kinase
FOC87_09555	COG2376	Dihydroxyacetone kinase
FOC87_09560	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC87_09565	COG1959	2 iron, 2 sulfur cluster binding
FOC87_09580	COG0457	Tetratricopeptide repeat
FOC87_09590	COG2770	Histidine kinase
FOC87_09590	COG3437	response regulator, receiver
FOC87_09665	COG1191	sigma factor activity
FOC87_09675	COG2208	phosphoserine phosphatase activity
FOC87_09680	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC87_09685	COG2205	protein histidine kinase activity
FOC87_09685	COG0784	Response regulator, receiver
FOC87_09685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC87_09685	COG2198	Histidine kinase
FOC87_09725	COG4585	Histidine kinase
FOC87_09730	COG2197	response regulator
FOC87_09760	COG0420	3'-5' exonuclease activity
FOC87_09765	COG4717	serine-type aminopeptidase activity
FOC87_09795	COG0346	lactoylglutathione lyase activity
FOC87_09800	COG0346	lactoylglutathione lyase activity
FOC87_09805	COG0457	Tetratricopeptide repeat
FOC87_09815	COG2267	carboxylic ester hydrolase activity
FOC87_09835	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC87_09840	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOC87_09850	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOC87_09895	COG0477	Major facilitator Superfamily
FOC87_09900	COG0477	Major facilitator Superfamily
FOC87_09910	COG3973	AAA domain
FOC87_09915	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC87_09935	COG4980	gas vesicle protein
FOC87_09940	COG0537	adenosine 5'-monophosphoramidase activity
FOC87_09945	COG1131	(ABC) transporter
FOC87_09950	COG4473	ABC transporter
FOC87_09965	COG1309	transcriptional regulator
FOC87_09975	COG3402	PFAM membrane-flanked domain
FOC87_09980	COG3428	Bacterial PH domain
FOC87_10000	COG1309	transcriptional regulator
FOC87_10020	COG3402	PFAM membrane-flanked domain
FOC87_10025	COG3428	Bacterial PH domain
FOC87_10030	COG2329	Antibiotic biosynthesis monooxygenase
FOC87_10035	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC87_10090	COG1309	transcriptional regulator
FOC87_10095	COG1511	domain protein
FOC87_10100	COG1511	domain protein
FOC87_10130	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
FOC87_10140	COG2378	regulation of single-species biofilm formation
FOC87_10145	COG1609	Transcriptional regulator
FOC87_10155	COG1234	tRNA 3'-trailer cleavage
FOC87_10160	COG0095	Lipoate-protein ligase
FOC87_10170	COG0318	PFAM AMP-dependent synthetase and ligase
FOC87_10235	COG1073	alpha beta
FOC87_10240	COG1408	metallophosphoesterase
FOC87_10250	COG1078	dGTPase activity
FOC87_10260	COG1595	DNA-templated transcription, initiation
FOC87_10265	COG3708	Transcriptional regulator
FOC87_10265	COG2207	Transcriptional regulator
FOC87_10270	COG2205	protein histidine kinase activity
FOC87_10275	COG0745	RESPONSE REGULATOR receiver
FOC87_10295	COG0501	Belongs to the peptidase M48B family
FOC87_10300	COG0697	spore germination
FOC87_10320	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FOC87_10325	COG2224	Isocitrate lyase
FOC87_10350	COG4903	ComK protein
FOC87_10355	COG0398	Pfam SNARE associated Golgi protein
FOC87_10415	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC87_10440	COG0367	asparagine synthase
FOC87_10450	COG0753	catalase activity
FOC87_10455	COG0004	ammonium transporteR
FOC87_10475	COG2996	Protein conserved in bacteria
FOC87_10485	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC87_10495	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_10510	COG0561	phosphatase activity
FOC87_10520	COG0542	response to heat
FOC87_10530	COG2267	carboxylic ester hydrolase activity
FOC87_10545	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC87_10550	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC87_10555	COG5504	Zn-dependent protease
FOC87_10565	COG0180	Tryptophanyl-tRNA synthetase
FOC87_10575	COG4166	transmembrane transport
FOC87_10580	COG0601	transmembrane transport
FOC87_10585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC87_10590	COG0444	Belongs to the ABC transporter superfamily
FOC87_10595	COG4608	Belongs to the ABC transporter superfamily
FOC87_10600	COG0534	Mate efflux family protein
FOC87_10605	COG4166	transmembrane transport
FOC87_10620	COG0861	Integral membrane protein TerC family
FOC87_10625	COG4862	establishment of competence for transformation
FOC87_10630	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC87_10640	COG1164	Oligoendopeptidase f
FOC87_10655	COG2346	COG2346, Truncated hemoglobins
FOC87_10660	COG4116	CYTH
FOC87_10670	COG2357	RelA SpoT domain protein
FOC87_10680	COG0564	pseudouridine synthase activity
FOC87_10695	COG0772	Belongs to the SEDS family
FOC87_10700	COG1216	Glycosyl transferase, family 2
FOC87_10720	COG0463	Glycosyl transferase, family 2
FOC87_10720	COG0457	Tetratricopeptide repeat
FOC87_10740	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FOC87_10755	COG1091	dTDP-4-dehydrorhamnose reductase activity
FOC87_10800	COG2153	protein acetylation
FOC87_10810	COG2382	esterase
FOC87_10825	COG5492	domain, Protein
FOC87_10830	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC87_10840	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOC87_10840	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC87_10875	COG1620	l-lactate permease
FOC87_10880	COG5634	Uncharacterized conserved protein (DUF2278)
FOC87_10935	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC87_10945	COG1476	TRANSCRIPTIONal
FOC87_11005	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC87_11020	COG4152	abc transporter atp-binding protein
FOC87_11025	COG1668	transmembrane transport
FOC87_11085	COG2226	methyltransferase
FOC87_11095	COG1686	Belongs to the peptidase S11 family
FOC87_11100	COG0681	Belongs to the peptidase S26 family
FOC87_11135	COG1012	belongs to the aldehyde dehydrogenase family
FOC87_11145	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC87_11150	COG1177	transmembrane transport
FOC87_11155	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOC87_11165	COG2409	Drug exporters of the RND superfamily
FOC87_11175	COG0564	pseudouridine synthase activity
FOC87_11185	COG2340	Cysteine-rich secretory protein family
FOC87_11190	COG0247	lactate metabolic process
FOC87_11195	COG0277	FAD linked oxidase domain protein
FOC87_11200	COG3835	regulator
FOC87_11210	COG0745	RESPONSE REGULATOR receiver
FOC87_11215	COG5002	protein histidine kinase activity
FOC87_11220	COG2186	Transcriptional regulator
FOC87_11240	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FOC87_11250	COG2116	formate transmembrane transporter activity
FOC87_11255	COG0861	Integral membrane protein TerC family
FOC87_11260	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC87_11270	COG2030	dehydratase
FOC87_11290	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_11295	COG3243	poly(R)-hydroxyalkanoic acid synthase
FOC87_11305	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC87_11320	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC87_11325	COG3842	ATPase activity
FOC87_11350	COG1349	DNA-binding transcription factor activity
FOC87_11360	COG0235	Class ii aldolase
FOC87_11370	COG2861	carbohydrate metabolic process
FOC87_11380	COG3852	Histidine kinase
FOC87_11385	COG1846	Transcriptional regulator
FOC87_11395	COG2318	DinB family
FOC87_11400	COG5002	protein histidine kinase activity
FOC87_11410	COG0720	synthase
FOC87_11425	COG4873	Protein conserved in bacteria
FOC87_11455	COG1780	Probably involved in ribonucleotide reductase function
FOC87_11460	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOC87_11465	COG1403	HNH endonuclease
FOC87_11475	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOC87_11480	COG1725	Transcriptional regulator
FOC87_11485	COG1131	(ABC) transporter
FOC87_11495	COG1131	(ABC) transporter
FOC87_11500	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC87_11515	COG1522	sequence-specific DNA binding
FOC87_11525	COG1335	isochorismatase
FOC87_11535	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC87_11540	COG2070	2-Nitropropane dioxygenase
FOC87_11545	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC87_11555	COG1696	Membrane protein involved in D-alanine export
FOC87_11580	COG0716	FMN binding
FOC87_11595	COG3173	Aminoglycoside phosphotransferase
FOC87_11615	COG0534	Mate efflux family protein
FOC87_11620	COG1968	undecaprenyl-diphosphatase activity
FOC87_11635	COG1846	Transcriptional regulator
FOC87_11645	COG1301	dicarboxylic acid transport
FOC87_11650	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC87_11655	COG4709	membrane
FOC87_11660	COG3874	Sporulation protein YtfJ
FOC87_11685	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC87_11690	COG0028	Belongs to the TPP enzyme family
FOC87_11695	COG0440	acetolactate synthase activity
FOC87_11770	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC87_11780	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC87_11785	COG1183	phosphatidylcholine synthase activity
FOC87_11790	COG1368	sulfuric ester hydrolase activity
FOC87_11800	COG0019	diaminopimelate decarboxylase activity
FOC87_11820	COG0529	Catalyzes the synthesis of activated sulfate
FOC87_11825	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC87_11845	COG1648	precorrin-2 dehydrogenase activity
FOC87_11850	COG0733	neurotransmitter:sodium symporter activity
FOC87_11870	COG1757	Na H antiporter
FOC87_11885	COG4758	membrane
FOC87_11890	COG4585	Histidine kinase
FOC87_11895	COG2197	response regulator
FOC87_11905	COG1114	Component of the transport system for branched-chain amino acids
FOC87_11915	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOC87_11955	COG0730	response to heat
FOC87_11960	COG0306	phosphate transporter
FOC87_11965	COG1392	Phosphate transport regulator
FOC87_11970	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC87_11985	COG3852	Histidine kinase
FOC87_11990	COG1801	Protein of unknown function DUF72
FOC87_12000	COG0582	viral genome integration into host DNA
FOC87_12005	COG5002	protein histidine kinase activity
FOC87_12020	COG0392	lysyltransferase activity
FOC87_12020	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FOC87_12035	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC87_12040	COG1686	Belongs to the peptidase S11 family
FOC87_12045	COG2715	membrane protein required for spore maturation
FOC87_12050	COG0700	Nucleoside recognition
FOC87_12055	COG1187	pseudouridine synthase activity
FOC87_12065	COG1333	cytochrome c biogenesis protein
FOC87_12070	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC87_12075	COG0745	RESPONSE REGULATOR receiver
FOC87_12080	COG5002	protein histidine kinase activity
FOC87_12085	COG2096	Adenosyltransferase
FOC87_12090	COG4942	peptidase
FOC87_12100	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FOC87_12105	COG1141	Ferredoxin
FOC87_12115	COG0514	ATP-dependent DNA helicase (RecQ)
FOC87_12120	COG1266	CAAX protease self-immunity
FOC87_12130	COG1408	metallophosphoesterase
FOC87_12140	COG4862	establishment of competence for transformation
FOC87_12145	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC87_12165	COG0492	ferredoxin-NADP+ reductase activity
FOC87_12240	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC87_12255	COG0142	geranyltranstransferase activity
FOC87_12265	COG0142	geranyltranstransferase activity
FOC87_12285	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC87_12290	COG0457	Tetratricopeptide repeat
FOC87_12310	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOC87_12320	COG4347	Protein of unknown function (DUF1405)
FOC87_12335	COG2738	Putative neutral zinc metallopeptidase
FOC87_12345	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_12350	COG1694	Mazg nucleotide pyrophosphohydrolase
FOC87_12365	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC87_12370	COG0438	transferase activity, transferring glycosyl groups
FOC87_12405	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOC87_12405	COG1199	ATP-dependent helicase activity
FOC87_12425	COG3935	DnaD domain protein
FOC87_12430	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOC87_12440	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC87_12440	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC87_12500	COG0116	Belongs to the methyltransferase superfamily
FOC87_12510	COG1199	ATP-dependent helicase activity
FOC87_12515	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FOC87_12525	COG3173	Aminoglycoside phosphotransferase
FOC87_12530	COG0024	Methionine aminopeptidase
FOC87_12540	COG2233	PERMEase
FOC87_12545	COG2311	Membrane
FOC87_12550	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC87_12560	COG0456	acetyltransferase
FOC87_12595	COG0754	glutathionylspermidine amidase activity
FOC87_12610	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC87_12625	COG0454	-acetyltransferase
FOC87_12645	COG0328	RNA-DNA hybrid ribonuclease activity
FOC87_12680	COG3403	YqcI/YcgG family
FOC87_12685	COG1280	lysine exporter protein (LysE YggA)
FOC87_12700	COG3162	membrane
FOC87_12705	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC87_12710	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC87_12720	COG0475	glutathione-regulated potassium exporter activity
FOC87_12725	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC87_12730	COG4978	Transcriptional regulator
FOC87_12730	COG0789	Transcriptional regulator
FOC87_12740	COG2323	membrane
FOC87_12745	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOC87_12800	COG1923	regulation of RNA biosynthetic process
FOC87_12810	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC87_12815	COG1360	Flagellar Motor Protein
FOC87_12825	COG2198	Histidine kinase
FOC87_12825	COG0643	Histidine kinase
FOC87_12830	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC87_12830	COG1776	CheC inhibitor of MCP methylation
FOC87_12845	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC87_12865	COG1256	bacterial-type flagellum assembly
FOC87_12870	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC87_12875	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FOC87_12890	COG1815	bacterial-type flagellum-dependent cell motility
FOC87_12895	COG1558	bacterial-type flagellum-dependent cell motility
FOC87_12905	COG1766	The M ring may be actively involved in energy transduction
FOC87_12910	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC87_12920	COG1157	protein secretion by the type III secretion system
FOC87_12955	COG0784	Response regulator, receiver
FOC87_12955	COG0835	chemotaxis
FOC87_12965	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC87_12970	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC87_12975	COG0741	lytic transglycosylase activity
FOC87_12985	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC87_12990	COG1776	CheC inhibitor of MCP methylation
FOC87_12990	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC87_13000	COG1338	Plays a role in the flagellum-specific transport system
FOC87_13005	COG1987	bacterial-type flagellum assembly
FOC87_13015	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC87_13020	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC87_13025	COG1419	protein localization to endoplasmic reticulum
FOC87_13030	COG4786	Flagellar basal body rod
FOC87_13035	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC87_13090	COG2329	Antibiotic biosynthesis monooxygenase
FOC87_13115	COG0583	DNA-binding transcription factor activity
FOC87_13120	COG3842	ATPase activity
FOC87_13135	COG1234	tRNA 3'-trailer cleavage
FOC87_13175	COG0406	alpha-ribazole phosphatase activity
FOC87_13195	COG1846	Transcriptional regulator
FOC87_13205	COG0367	asparagine synthase
FOC87_13235	COG1802	Transcriptional regulator
FOC87_13240	COG0697	spore germination
FOC87_13245	COG0523	cobalamin synthesis protein
FOC87_13250	COG0701	Predicted permease
FOC87_13265	COG1757	Na H antiporter
FOC87_13270	COG0114	fumarate hydratase activity
FOC87_13285	COG0534	Mate efflux family protein
FOC87_13290	COG3340	Belongs to the peptidase S51 family
FOC87_13310	COG0785	Cytochrome C biogenesis protein
FOC87_13340	COG2733	membrane
FOC87_13375	COG1131	(ABC) transporter
FOC87_13390	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC87_13395	COG0528	UMP kinase activity
FOC87_13405	COG1027	Aspartate ammonia-lyase
FOC87_13410	COG0281	malic enzyme
FOC87_13415	COG4191	Histidine kinase
FOC87_13420	COG0784	Response regulator, receiver
FOC87_13425	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC87_13445	COG3620	sequence-specific DNA binding
FOC87_13470	COG1051	belongs to the nudix hydrolase family
FOC87_13495	COG1966	Carbon starvation protein
FOC87_13505	COG0477	Major facilitator Superfamily
FOC87_13510	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC87_13520	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOC87_13525	COG4166	transmembrane transport
FOC87_13530	COG2223	nitrite transmembrane transporter activity
FOC87_13535	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC87_13550	COG2244	polysaccharide biosynthetic process
FOC87_13555	COG0733	neurotransmitter:sodium symporter activity
FOC87_13565	COG5566	PFAM Mor transcription activator
FOC87_13570	COG2323	membrane
FOC87_13590	COG2084	Dehydrogenase
FOC87_13605	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC87_13615	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC87_13620	COG0028	Belongs to the TPP enzyme family
FOC87_13630	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC87_13640	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC87_13665	COG2814	Major facilitator Superfamily
FOC87_13670	COG3384	dioxygenase
FOC87_13690	COG3279	Response regulator of the LytR AlgR family
FOC87_13695	COG0427	acetyl-CoA hydrolase
FOC87_13730	COG4166	transmembrane transport
FOC87_13755	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC87_13760	COG0745	RESPONSE REGULATOR receiver
FOC87_13780	COG1914	H( )-stimulated, divalent metal cation uptake system
FOC87_13795	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC87_13800	COG0531	amino acid
FOC87_13845	COG0745	RESPONSE REGULATOR receiver
FOC87_13850	COG2205	protein histidine kinase activity
FOC87_13855	COG2390	Transcriptional regulator
FOC87_13865	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC87_13870	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOC87_13880	COG4846	Membrane protein involved in cytochrome C biogenesis
FOC87_13900	COG0006	proline dipeptidase activity
FOC87_13905	COG2132	Multicopper oxidase
FOC87_13940	COG1114	Component of the transport system for branched-chain amino acids
FOC87_13950	COG2372	response to copper ion
FOC87_13950	COG1276	copper resistance
FOC87_13955	COG4549	nuclear export factor GLE1
FOC87_13960	COG0697	spore germination
FOC87_13965	COG0583	DNA-binding transcription factor activity
FOC87_13970	COG1959	2 iron, 2 sulfur cluster binding
FOC87_13975	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FOC87_13980	COG0778	Nitroreductase
FOC87_13990	COG0628	permease
FOC87_14000	COG1231	oxidoreductase activity
FOC87_14005	COG0523	cobalamin synthesis protein
FOC87_14020	COG0318	PFAM AMP-dependent synthetase and ligase
FOC87_14025	COG2030	dehydratase
FOC87_14030	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC87_14040	COG0411	ABC transporter
FOC87_14060	COG0583	DNA-binding transcription factor activity
FOC87_14090	COG1271	oxidase subunit
FOC87_14095	COG1294	oxidase, subunit
FOC87_14100	COG4988	ABC transporter
FOC87_14105	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOC87_14125	COG1686	Belongs to the peptidase S11 family
FOC87_14140	COG1388	LysM domain
FOC87_14140	COG0791	NLP P60 protein
FOC87_14150	COG1132	(ABC) transporter
FOC87_14155	COG0745	RESPONSE REGULATOR receiver
FOC87_14160	COG2205	protein histidine kinase activity
FOC87_14170	COG0300	oxidoreductase activity
FOC87_14175	COG4122	O-methyltransferase activity
FOC87_14205	COG0460	homoserine dehydrogenase
FOC87_14230	COG1316	TRANSCRIPTIONal
FOC87_14240	COG0745	RESPONSE REGULATOR receiver
FOC87_14245	COG5002	protein histidine kinase activity
FOC87_14260	COG1285	pathogenesis
FOC87_14265	COG1247	-acetyltransferase
FOC87_14275	COG4264	IucA IucC family
FOC87_14280	COG0318	PFAM AMP-dependent synthetase and ligase
FOC87_14295	COG1082	Xylose isomerase domain protein TIM barrel
FOC87_14305	COG2814	Major facilitator Superfamily
FOC87_14310	COG1279	arginine transmembrane transporter activity
FOC87_14315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_14325	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC87_14360	COG0577	efflux transmembrane transporter activity
FOC87_14365	COG2002	toxin-antitoxin pair type II binding
FOC87_14370	COG1404	Belongs to the peptidase S8 family
FOC87_14375	COG0640	Transcriptional regulator
FOC87_14380	COG0667	Aldo Keto reductase
FOC87_14385	COG2814	Major facilitator Superfamily
FOC87_14410	COG0840	transmembrane signaling receptor activity
FOC87_14425	COG3949	Membrane
FOC87_14430	COG0783	Belongs to the Dps family
FOC87_14445	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC87_14455	COG1231	oxidoreductase activity
FOC87_14465	COG4989	oxidoreductase activity
FOC87_14470	COG0523	cobalamin synthesis protein
FOC87_14475	COG0456	acetyltransferase
FOC87_14495	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC87_14495	COG3443	Belongs to the bacterial solute-binding protein 9 family
FOC87_14505	COG0702	epimerase
FOC87_14515	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC87_14525	COG4166	transmembrane transport
FOC87_14540	COG0406	alpha-ribazole phosphatase activity
FOC87_14550	COG5337	Spore coat protein CotH
FOC87_14555	COG1051	belongs to the nudix hydrolase family
FOC87_14560	COG0586	Pfam SNARE associated Golgi protein
FOC87_14565	COG2244	polysaccharide biosynthetic process
FOC87_14575	COG0701	Predicted permease
FOC87_14580	COG3689	TIGRFAM TIGR03943 family protein
FOC87_14585	COG1607	acyl-coa hydrolase
FOC87_14595	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC87_14610	COG0702	epimerase
FOC87_14615	COG2839	Protein conserved in bacteria
FOC87_14620	COG1253	flavin adenine dinucleotide binding
FOC87_14635	COG1114	Component of the transport system for branched-chain amino acids
FOC87_14640	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC87_14660	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC87_14670	COG1876	peptidase activity
FOC87_14685	COG2211	Major facilitator Superfamily
FOC87_14700	COG2368	4-hydroxyphenylacetate
FOC87_14710	COG0196	riboflavin kinase activity
FOC87_14725	COG0251	oxidation-reduction process
FOC87_14735	COG3971	2-oxopent-4-enoate hydratase activity
FOC87_14755	COG1942	4-Oxalocrotonate Tautomerase
FOC87_14765	COG0561	phosphatase activity
FOC87_14775	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC87_14780	COG4106	trans-aconitate 2-methyltransferase activity
FOC87_14795	COG1819	glycosyl
FOC87_14800	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_14805	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_14835	COG0456	acetyltransferase
FOC87_14915	COG3874	Sporulation protein YtfJ
FOC87_14940	COG2226	methyltransferase
FOC87_14965	COG0346	lactoylglutathione lyase activity
FOC87_14980	COG1595	DNA-templated transcription, initiation
FOC87_14995	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC87_14995	COG0426	domain, Protein
FOC87_15005	COG0386	Belongs to the glutathione peroxidase family
FOC87_15010	COG1305	Transglutaminase-like
FOC87_15015	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
FOC87_15020	COG0714	Associated with various cellular activities
FOC87_15035	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOC87_15040	COG1140	nitrate reductase beta subunit
FOC87_15045	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOC87_15050	COG2181	nitrate reductase activity
FOC87_15055	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC87_15060	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC87_15065	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC87_15075	COG0314	molybdopterin synthase activity
FOC87_15085	COG2223	nitrite transmembrane transporter activity
FOC87_15095	COG1648	precorrin-2 dehydrogenase activity
FOC87_15105	COG1587	Uroporphyrinogen-III synthase
FOC87_15105	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC87_15110	COG2146	nitrite reductase [NAD(P)H] activity
FOC87_15115	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC87_15120	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
FOC87_15145	COG2359	stage V sporulation protein S
FOC87_15205	COG1418	mRNA catabolic process
FOC87_15210	COG0488	(ABC) transporter
FOC87_15225	COG0629	single-stranded DNA binding
FOC87_15240	COG1413	lyase activity
FOC87_15255	COG2521	methyltransferase
FOC87_15255	COG2136	Putative SAM-dependent methyltransferase
FOC87_15300	COG0017	Asparaginyl-tRNA synthetase
FOC87_15320	COG1674	ftsk spoiiie
FOC87_15440	COG1929	Belongs to the glycerate kinase type-1 family
FOC87_15445	COG0471	metal ion transport
FOC87_15450	COG0745	RESPONSE REGULATOR receiver
FOC87_15455	COG3850	Histidine kinase
FOC87_15455	COG5002	protein histidine kinase activity
FOC87_15470	COG0733	neurotransmitter:sodium symporter activity
FOC87_15495	COG2610	gluconate transmembrane transporter activity
FOC87_15500	COG1454	alcohol dehydrogenase
FOC87_15505	COG1794	racemase activity, acting on amino acids and derivatives
FOC87_15515	COG0456	acetyltransferase
FOC87_15520	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOC87_15530	COG1131	(ABC) transporter
FOC87_15535	COG4473	ABC transporter
FOC87_15545	COG0546	phosphoglycolate phosphatase activity
FOC87_15565	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC87_15570	COG3250	beta-galactosidase activity
FOC87_15585	COG0768	penicillin binding
FOC87_15595	COG0204	Acyl-transferase
FOC87_15600	COG1272	protein, Hemolysin III
FOC87_15610	COG0805	protein transport
FOC87_15620	COG1307	EDD domain protein, DegV family
FOC87_15625	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FOC87_15630	COG1999	signal sequence binding
FOC87_15635	COG0071	Belongs to the small heat shock protein (HSP20) family
FOC87_15640	COG0367	asparagine synthase
FOC87_15660	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC87_15665	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC87_15685	COG1335	isochorismatase
FOC87_15690	COG1051	belongs to the nudix hydrolase family
FOC87_15700	COG0668	transmembrane transport
FOC87_15705	COG4585	Histidine kinase
FOC87_15705	COG2203	Gaf domain
FOC87_15710	COG2197	response regulator
FOC87_15720	COG1064	alcohol dehydrogenase
FOC87_15775	COG1125	glycine betaine transport
FOC87_15775	COG0517	IMP dehydrogenase activity
FOC87_15780	COG1174	glycine betaine transport
FOC87_15815	COG1253	flavin adenine dinucleotide binding
FOC87_15820	COG1012	belongs to the aldehyde dehydrogenase family
FOC87_15825	COG5506	Protein of unknown function (DUF1694)
FOC87_15840	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC87_15845	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOC87_15850	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC87_15855	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC87_15860	COG0456	acetyltransferase
FOC87_15865	COG3829	transcription factor binding
FOC87_15870	COG1509	lysine 2,3-aminomutase activity
FOC87_15905	COG3064	Membrane
FOC87_15905	COG4991	sh3 domain protein
FOC87_15905	COG0515	serine threonine protein kinase
FOC87_15910	COG4326	sporulation control protein
FOC87_15915	COG0671	phosphoesterase, PA-phosphatase related
FOC87_15920	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC87_15925	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC87_15985	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC87_16020	COG0300	oxidoreductase activity
FOC87_16040	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC87_16040	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC87_16050	COG4841	protein insertion into membrane
FOC87_16055	COG0372	Belongs to the citrate synthase family
FOC87_16060	COG2079	MmgE PrpD family protein
FOC87_16065	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FOC87_16070	COG1960	acyl-CoA dehydrogenase activity
FOC87_16075	COG2084	Dehydrogenase
FOC87_16085	COG1280	lysine exporter protein (LysE YggA)
FOC87_16090	COG1024	Enoyl-CoA hydratase
FOC87_16105	COG0420	3'-5' exonuclease activity
FOC87_16110	COG0419	ATPase involved in DNA repair
FOC87_16130	COG2223	nitrite transmembrane transporter activity
FOC87_16135	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_16140	COG1169	isochorismate synthase
FOC87_16145	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOC87_16150	COG3433	isochorismatase activity
FOC87_16150	COG1535	isochorismatase
FOC87_16155	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC87_16160	COG3251	PFAM MbtH domain protein
FOC87_16165	COG2814	Major facilitator Superfamily
FOC87_16180	COG0776	regulation of translation
FOC87_16190	COG2318	DinB family
FOC87_16200	COG1115	amino acid carrier protein
FOC87_16215	COG2329	Antibiotic biosynthesis monooxygenase
FOC87_16220	COG1187	pseudouridine synthase activity
FOC87_16225	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC87_16235	COG1136	(ABC) transporter
FOC87_16245	COG0596	Alpha beta hydrolase
FOC87_16250	COG2814	Major facilitator Superfamily
FOC87_16270	COG2226	methyltransferase
FOC87_16315	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_16350	COG1247	-acetyltransferase
FOC87_16390	COG2226	methyltransferase
FOC87_16395	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC87_16405	COG1278	Cold shock
FOC87_16420	COG0010	Belongs to the arginase family
FOC87_16430	COG0583	DNA-binding transcription factor activity
FOC87_16435	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC87_16450	COG0583	DNA-binding transcription factor activity
FOC87_16455	COG2258	MOSC domain
FOC87_16470	COG1132	(ABC) transporter
FOC87_16475	COG1132	(ABC) transporter
FOC87_16495	COG1396	sequence-specific DNA binding
FOC87_16525	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC87_16535	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
FOC87_16540	COG1595	DNA-templated transcription, initiation
FOC87_16565	COG1649	PFAM Uncharacterised BCR, COG1649
FOC87_16590	COG2971	BadF BadG BcrA BcrD
FOC87_16600	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOC87_16635	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_16725	COG0582	viral genome integration into host DNA
FOC87_16745	COG1136	(ABC) transporter
FOC87_16745	COG0577	efflux transmembrane transporter activity
FOC87_16750	COG0500	methyltransferase
FOC87_16750	COG3615	Tellurite resistance protein tehB
FOC87_16845	COG1846	Transcriptional regulator
FOC87_16880	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC87_16890	COG0110	maltose O-acetyltransferase activity
FOC87_16905	COG0768	penicillin binding
FOC87_16910	COG1595	DNA-templated transcription, initiation
FOC87_16920	COG0768	penicillin binding
FOC87_16930	COG2367	Beta-lactamase
FOC87_16940	COG1609	Transcriptional regulator
FOC87_16945	COG2814	Major facilitator Superfamily
FOC87_16950	COG0673	inositol 2-dehydrogenase activity
FOC87_16980	COG3718	enzyme involved in inositol metabolism
FOC87_17005	COG0737	Belongs to the 5'-nucleotidase family
FOC87_17015	COG0457	Tetratricopeptide repeat
FOC87_17020	COG1476	TRANSCRIPTIONal
FOC87_17035	COG1876	peptidase activity
FOC87_17055	COG1309	transcriptional regulator
FOC87_17070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC87_17090	COG1252	NADH dehydrogenase
FOC87_17095	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC87_17125	COG1960	acyl-CoA dehydrogenase activity
FOC87_17130	COG0439	Biotin carboxylase
FOC87_17135	COG0511	ligase activity, forming carbon-carbon bonds
FOC87_17140	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC87_17145	COG1024	Enoyl-CoA hydratase
FOC87_17150	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC87_17155	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC87_17165	COG1247	-acetyltransferase
FOC87_17170	COG0572	uridine kinase
FOC87_17180	COG2318	DinB family
FOC87_17185	COG1686	Belongs to the peptidase S11 family
FOC87_17210	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC87_17230	COG3227	Zinc metalloprotease (Elastase)
FOC87_17250	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC87_17250	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC87_17315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_17355	COG3386	PFAM SMP-30 Gluconolaconase
FOC87_17365	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
FOC87_17370	COG3773	Cell wall hydrolase
FOC87_17380	COG0745	RESPONSE REGULATOR receiver
FOC87_17385	COG2205	protein histidine kinase activity
FOC87_17410	COG1136	(ABC) transporter
FOC87_17415	COG0577	efflux transmembrane transporter activity
FOC87_17435	COG0460	homoserine dehydrogenase
FOC87_17440	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_17450	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC87_17525	COG2124	cytochrome p450
FOC87_17560	COG0561	phosphatase activity
FOC87_17565	COG5002	protein histidine kinase activity
FOC87_17575	COG1819	glycosyl
FOC87_17580	COG1794	racemase activity, acting on amino acids and derivatives
FOC87_17605	COG2205	protein histidine kinase activity
FOC87_17615	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC87_17620	COG0604	alcohol dehydrogenase
FOC87_17625	COG0671	phosphoesterase, PA-phosphatase related
FOC87_17640	COG4221	oxidoreductase activity
FOC87_17650	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC87_17690	COG0693	protein deglycase activity
FOC87_17695	COG0456	acetyltransferase
FOC87_17705	COG2814	Major facilitator Superfamily
FOC87_17720	COG0584	glycerophosphoryl diester phosphodiesterase
FOC87_17740	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_17745	COG0697	spore germination
FOC87_17780	COG2223	nitrite transmembrane transporter activity
FOC87_17785	COG2816	NAD+ diphosphatase activity
FOC87_17790	COG0592	DNA-directed DNA polymerase activity
FOC87_17795	COG1051	belongs to the nudix hydrolase family
FOC87_17815	COG0406	alpha-ribazole phosphatase activity
FOC87_17825	COG3878	Protein conserved in bacteria
FOC87_17845	COG4667	esterase of the alpha-beta hydrolase superfamily
FOC87_17885	COG0322	excinuclease ABC activity
FOC87_17920	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC87_17945	COG1011	Hydrolase
FOC87_17965	COG1523	belongs to the glycosyl hydrolase 13 family
FOC87_17970	COG3227	Zinc metalloprotease (Elastase)
FOC87_17990	COG0346	lactoylglutathione lyase activity
FOC87_17995	COG0201	protein transport
FOC87_18005	COG0697	spore germination
FOC87_18010	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_18045	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC87_18060	COG2959	enzyme of heme biosynthesis
FOC87_18095	COG1309	transcriptional regulator
FOC87_18130	COG3284	Transcriptional regulator
FOC87_18145	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC87_18150	COG1349	DNA-binding transcription factor activity
FOC87_18170	COG1959	2 iron, 2 sulfur cluster binding
FOC87_18185	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC87_18190	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC87_18195	COG0022	dehydrogenase e1 component
FOC87_18200	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC87_18210	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_18215	COG0456	acetyltransferase
FOC87_18215	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC87_18220	COG0572	uridine kinase
FOC87_18230	COG0494	nUDIX hydrolase
FOC87_18255	COG4176	ABC-type proline glycine betaine transport system permease component
FOC87_18260	COG4175	Glycine betaine
FOC87_18260	COG0517	IMP dehydrogenase activity
FOC87_18285	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FOC87_18290	COG2153	protein acetylation
FOC87_18295	COG3397	chitin binding
FOC87_18305	COG2205	protein histidine kinase activity
FOC87_18310	COG2226	methyltransferase
FOC87_18315	COG2315	Protein conserved in bacteria
FOC87_18320	COG2153	protein acetylation
FOC87_18325	COG0658	competence protein
FOC87_18325	COG2333	competence protein COMEC
FOC87_18375	COG3973	AAA domain
FOC87_18395	COG0514	ATP-dependent DNA helicase (RecQ)
FOC87_18420	COG4637	Psort location Cytoplasmic, score
FOC87_18445	COG3397	chitin binding
FOC87_18460	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC87_18465	COG1115	amino acid carrier protein
FOC87_18470	COG1012	belongs to the aldehyde dehydrogenase family
FOC87_18475	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC87_18485	COG3938	Belongs to the proline racemase family
FOC87_18490	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC87_18530	COG0586	Pfam SNARE associated Golgi protein
FOC87_18545	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC87_18550	COG0519	Catalyzes the synthesis of GMP from XMP
FOC87_18555	COG4166	transmembrane transport
FOC87_18565	COG4948	Mandelate Racemase Muconate Lactonizing
FOC87_18610	COG2936	dipeptidyl-peptidase activity
FOC87_18615	COG5002	protein histidine kinase activity
FOC87_18620	COG0745	RESPONSE REGULATOR receiver
FOC87_18650	COG1164	Oligoendopeptidase f
FOC87_18655	COG0531	amino acid
FOC87_18660	COG1522	sequence-specific DNA binding
FOC87_18665	COG1307	EDD domain protein, DegV family
FOC87_18700	COG2814	Major facilitator Superfamily
FOC87_18710	COG1664	Polymer-forming cytoskeletal
FOC87_18715	COG0789	Transcriptional regulator
FOC87_18725	COG0477	Major facilitator Superfamily
FOC87_18725	COG2814	Major facilitator Superfamily
FOC87_18745	COG2261	transglycosylase associated protein
FOC87_18760	COG2226	methyltransferase
FOC87_18790	COG0436	Aminotransferase
FOC87_18795	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOC87_18800	COG5146	pantothenate kinase activity
FOC87_18805	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FOC87_18820	COG1131	(ABC) transporter
FOC87_18865	COG0628	permease
FOC87_18875	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC87_18880	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC87_18885	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC87_18920	COG2746	aminoglycoside 3-N-acetyltransferase activity
FOC87_18945	COG0697	spore germination
FOC87_18950	COG2318	DinB family
FOC87_18990	COG0861	Integral membrane protein TerC family
FOC87_18995	COG1368	sulfuric ester hydrolase activity
FOC87_19000	COG0488	(ABC) transporter
FOC87_19010	COG2409	Drug exporters of the RND superfamily
FOC87_19010	COG1033	growth of symbiont in host cell
FOC87_19015	COG1309	transcriptional regulator
FOC87_19030	COG0287	Prephenate dehydrogenase
FOC87_19035	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC87_19045	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FOC87_19045	COG1605	Chorismate mutase
FOC87_19085	COG3584	3D domain protein
FOC87_19085	COG1388	LysM domain
FOC87_19095	COG2610	gluconate transmembrane transporter activity
FOC87_19100	COG1024	Enoyl-CoA hydratase
FOC87_19110	COG3290	protein histidine kinase activity
FOC87_19110	COG3829	transcription factor binding
FOC87_19130	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC87_19135	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC87_19145	COG2390	Transcriptional regulator
FOC87_19150	COG1070	Carbohydrate kinase
FOC87_19185	COG2329	Antibiotic biosynthesis monooxygenase
FOC87_19205	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC87_19220	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC87_19225	COG4187	Peptidase family M20/M25/M40
FOC87_19230	COG1414	Transcriptional regulator
FOC87_19235	COG0833	amino acid
FOC87_19240	COG1690	Belongs to the RtcB family
FOC87_19245	COG3239	Fatty acid desaturase
FOC87_19250	COG1785	Belongs to the alkaline phosphatase family
FOC87_19260	COG3655	Transcriptional regulator
FOC87_19275	COG4377	Putative membrane peptidase family (DUF2324)
FOC87_19285	COG3279	Response regulator of the LytR AlgR family
FOC87_19295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC87_19300	COG0346	lactoylglutathione lyase activity
FOC87_19320	COG0714	Associated with various cellular activities
FOC87_19345	COG0463	Glycosyl transferase, family 2
FOC87_19360	COG0463	Glycosyl transferase, family 2
FOC87_19370	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC87_19375	COG0753	catalase activity
FOC87_19385	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FOC87_19415	COG0778	Nitroreductase
FOC87_19420	COG1846	Transcriptional regulator
FOC87_19455	COG1725	Transcriptional regulator
FOC87_19475	COG1136	(ABC) transporter
FOC87_19475	COG0577	efflux transmembrane transporter activity
FOC87_19500	COG2207	Transcriptional regulator
FOC87_19505	COG0456	acetyltransferase
FOC87_19525	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_19565	COG0730	response to heat
FOC87_19575	COG0833	amino acid
FOC87_19585	COG4335	DNA alkylation repair
FOC87_19645	COG1984	allophanate hydrolase subunit 2
FOC87_19650	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOC87_19655	COG1414	Transcriptional regulator
FOC87_19670	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC87_19675	COG0640	Transcriptional regulator
FOC87_19685	COG1960	acyl-CoA dehydrogenase activity
FOC87_19735	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_19750	COG5577	PFAM Coat F domain
FOC87_19755	COG3403	YqcI/YcgG family
FOC87_19760	COG1280	lysine exporter protein (LysE YggA)
FOC87_19765	COG1113	amino acid transport
FOC87_19795	COG1063	alcohol dehydrogenase
FOC87_19805	COG1027	Aspartate ammonia-lyase
FOC87_19810	COG0252	asparaginase activity
FOC87_19815	COG1396	sequence-specific DNA binding
FOC87_19870	COG2207	Transcriptional regulator
FOC87_19890	COG0322	excinuclease ABC activity
FOC87_19895	COG0531	amino acid
FOC87_19900	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC87_19910	COG0784	Response regulator, receiver
FOC87_19915	COG4191	Histidine kinase
FOC87_19920	COG2066	Belongs to the glutaminase family
FOC87_19925	COG1115	amino acid carrier protein
FOC87_19955	COG0737	Belongs to the 5'-nucleotidase family
FOC87_19960	COG2329	Antibiotic biosynthesis monooxygenase
FOC87_19970	COG0598	Magnesium transport protein CorA
FOC87_20005	COG0415	Belongs to the DNA photolyase family
FOC87_20010	COG0288	reversible hydration of carbon dioxide
FOC87_20020	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC87_20025	COG5609	conserved protein (DUF2294)
FOC87_20040	COG0714	Associated with various cellular activities
FOC87_20050	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC87_20055	COG2267	carboxylic ester hydrolase activity
FOC87_20060	COG4641	Protein conserved in bacteria
FOC87_20065	COG1136	(ABC) transporter
FOC87_20070	COG0577	efflux transmembrane transporter activity
FOC87_20085	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC87_20090	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOC87_20095	COG1121	(ABC) transporter
FOC87_20120	COG0798	PFAM Bile acid sodium symporter
FOC87_20125	COG0346	lactoylglutathione lyase activity
FOC87_20130	COG0640	Transcriptional regulator
FOC87_20145	COG0443	Heat shock 70 kDa protein
FOC87_20165	COG0346	lactoylglutathione lyase activity
FOC87_20185	COG2814	Major facilitator Superfamily
FOC87_20210	COG0745	RESPONSE REGULATOR receiver
FOC87_20215	COG5002	protein histidine kinase activity
FOC87_20215	COG3850	Histidine kinase
FOC87_20240	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FOC87_20265	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_20270	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC87_20280	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC87_20295	COG2309	aminopeptidase activity
FOC87_20305	COG0789	Transcriptional regulator
FOC87_20310	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FOC87_20330	COG0577	efflux transmembrane transporter activity
FOC87_20345	COG5002	protein histidine kinase activity
FOC87_20345	COG3850	Histidine kinase
FOC87_20355	COG2364	Membrane
FOC87_20360	COG1846	Transcriptional regulator
FOC87_20365	COG0456	acetyltransferase
FOC87_20370	COG2808	Putative FMN-binding domain
FOC87_20375	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_20390	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC87_20405	COG1252	NADH dehydrogenase
FOC87_20410	COG3227	Zinc metalloprotease (Elastase)
FOC87_20415	COG0584	glycerophosphoryl diester phosphodiesterase
FOC87_20455	COG0738	Major facilitator superfamily
FOC87_20460	COG0673	inositol 2-dehydrogenase activity
FOC87_20465	COG0561	phosphatase activity
FOC87_20470	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC87_20475	COG1609	Transcriptional regulator
FOC87_20480	COG0457	Tetratricopeptide repeat
FOC87_20505	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC87_20530	COG0814	amino acid
FOC87_20535	COG1760	l-serine dehydratase
FOC87_20540	COG1760	l-serine dehydratase
FOC87_20545	COG2184	nucleotidyltransferase activity
FOC87_20550	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC87_20555	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FOC87_20565	COG1335	isochorismatase
FOC87_20570	COG1522	sequence-specific DNA binding
FOC87_20575	COG0531	amino acid
FOC87_20590	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC87_20610	COG0662	Cupin 2, conserved barrel domain protein
FOC87_20615	COG2207	Transcriptional regulator
FOC87_20615	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC87_20645	COG3409	Peptidoglycan-binding domain 1 protein
FOC87_20645	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC87_20685	COG0477	Major facilitator Superfamily
FOC87_20695	COG1846	Transcriptional regulator
FOC87_20700	COG2814	Major facilitator Superfamily
FOC87_20710	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC87_20715	COG1131	(ABC) transporter
FOC87_20740	COG1309	transcriptional regulator
FOC87_20755	COG2031	fatty acid transporter
FOC87_20765	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC87_20800	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC87_20815	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC87_20820	COG1288	antiporter activity
FOC87_20825	COG2356	endonuclease I
FOC87_20830	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC87_20860	COG3443	Belongs to the bacterial solute-binding protein 9 family
FOC87_20860	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC87_20865	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_20870	COG0506	proline dehydrogenase activity
FOC87_20885	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOC87_20895	COG2197	response regulator
FOC87_20915	COG1733	regulation of RNA biosynthetic process
FOC87_20920	COG0778	Nitroreductase
FOC87_20940	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_20950	COG1131	(ABC) transporter
FOC87_20975	COG1011	Hydrolase
FOC87_21025	COG0346	lactoylglutathione lyase activity
FOC87_21030	COG1940	carbohydrate kinase activity
FOC87_21035	COG0738	Major facilitator superfamily
FOC87_21040	COG0110	maltose O-acetyltransferase activity
FOC87_21045	COG0628	permease
FOC87_21065	COG2226	methyltransferase
FOC87_21075	COG0477	Major facilitator Superfamily
FOC87_21105	COG1253	flavin adenine dinucleotide binding
FOC87_21110	COG0789	Transcriptional regulator
FOC87_21115	COG0697	spore germination
FOC87_21120	COG1357	PFAM Pentapeptide repeats (8 copies)
FOC87_21125	COG3813	Protein conserved in bacteria
FOC87_21130	COG2706	6-phosphogluconolactonase activity
FOC87_21135	COG1070	Carbohydrate kinase
FOC87_21145	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOC87_21150	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FOC87_21160	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOC87_21180	COG0814	amino acid
FOC87_21205	COG1393	Belongs to the ArsC family
FOC87_21215	COG2188	Transcriptional regulator
FOC87_21220	COG0673	inositol 2-dehydrogenase activity
FOC87_21235	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_21255	COG0384	phenazine biosynthesis protein PhzF
FOC87_21265	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_21285	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC87_21290	COG1733	regulation of RNA biosynthetic process
FOC87_21320	COG1191	sigma factor activity
FOC87_21330	COG1266	CAAX protease self-immunity
FOC87_21335	COG1309	transcriptional regulator
FOC87_21355	COG3152	Membrane
FOC87_21405	COG1151	hydroxylamine reductase activity
FOC87_21415	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_21420	COG3409	Peptidoglycan-binding domain 1 protein
FOC87_21420	COG3757	hydrolase, family 25
FOC87_21455	COG2072	flavoprotein involved in K transport
FOC87_21485	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_21500	COG1695	Transcriptional regulator
FOC87_21505	COG0604	alcohol dehydrogenase
FOC87_21510	COG1113	amino acid transport
FOC87_21515	COG2814	Major facilitator Superfamily
FOC87_21545	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC87_21550	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC87_21565	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC87_21570	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_21575	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_21580	COG3739	integral membrane protein
FOC87_21585	COG0384	phenazine biosynthesis protein PhzF
FOC87_21605	COG0583	DNA-binding transcription factor activity
FOC87_21625	COG1193	negative regulation of DNA recombination
FOC87_21645	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FOC87_21650	COG1164	Oligoendopeptidase f
FOC87_21655	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC87_21685	COG0584	glycerophosphoryl diester phosphodiesterase
FOC87_21710	COG0640	Transcriptional regulator
FOC87_21715	COG0604	alcohol dehydrogenase
FOC87_21725	COG0457	Tetratricopeptide repeat
FOC87_21735	COG2808	Putative FMN-binding domain
FOC87_21750	COG0385	Bile acid
FOC87_21755	COG0277	FAD linked oxidase domain protein
FOC87_21785	COG1216	Glycosyl transferase, family 2
FOC87_21790	COG1024	Enoyl-CoA hydratase
FOC87_21800	COG1285	pathogenesis
FOC87_21815	COG2514	catechol 2,3-dioxygenase activity
FOC87_21820	COG2720	vancomycin resistance protein
FOC87_21855	COG0716	FMN binding
FOC87_21885	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_21895	COG0165	Argininosuccinate lyase
FOC87_21910	COG4145	pantothenate transmembrane transporter activity
FOC87_21920	COG1012	belongs to the aldehyde dehydrogenase family
FOC87_21925	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_21935	COG1657	PFAM Prenyltransferase squalene oxidase
FOC87_21940	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
FOC87_21945	COG2962	Rard protein
FOC87_21950	COG3326	Membrane
FOC87_21965	COG0489	protein tyrosine kinase activity
FOC87_21975	COG0314	molybdopterin synthase activity
FOC87_21980	COG0303	'Molybdopterin
FOC87_21985	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC87_21990	COG2116	formate transmembrane transporter activity
FOC87_22000	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC87_22005	COG5609	conserved protein (DUF2294)
FOC87_22010	COG2427	Protein of unknown function (DUF1641)
FOC87_22015	COG3383	formate dehydrogenase (NAD+) activity
FOC87_22020	COG0697	spore germination
FOC87_22060	COG2226	methyltransferase
FOC87_22065	COG4166	transmembrane transport
FOC87_22075	COG4166	transmembrane transport
FOC87_22080	COG4166	transmembrane transport
FOC87_22085	COG1301	dicarboxylic acid transport
FOC87_22090	COG1316	TRANSCRIPTIONal
FOC87_22100	COG1595	DNA-templated transcription, initiation
FOC87_22120	COG1131	(ABC) transporter
FOC87_22130	COG0673	inositol 2-dehydrogenase activity
FOC87_22140	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC87_22145	COG0187	DNA topoisomerase II activity
FOC87_22150	COG1832	CoA-binding protein
FOC87_22155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC87_22160	COG0745	RESPONSE REGULATOR receiver
FOC87_22180	COG4841	protein insertion into membrane
FOC87_22185	COG0824	Thioesterase
FOC87_22215	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC87_22225	COG2274	protein secretion by the type I secretion system
FOC87_22230	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC87_22270	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC87_22285	COG0183	Belongs to the thiolase family
FOC87_22290	COG0318	PFAM AMP-dependent synthetase and ligase
FOC87_22295	COG1268	BioY protein
FOC87_22300	COG0318	PFAM AMP-dependent synthetase and ligase
FOC87_22350	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_22360	COG5002	protein histidine kinase activity
FOC87_22365	COG0400	carboxylic ester hydrolase activity
FOC87_22370	COG0346	lactoylglutathione lyase activity
FOC87_22375	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC87_22380	COG0069	glutamate synthase activity
FOC87_22385	COG1902	pentaerythritol trinitrate reductase activity
FOC87_22390	COG1329	Transcriptional regulator
FOC87_22395	COG0010	Belongs to the arginase family
FOC87_22420	COG2226	methyltransferase
FOC87_22460	COG4846	Membrane protein involved in cytochrome C biogenesis
FOC87_22465	COG0785	Cytochrome C biogenesis protein
FOC87_22475	COG1473	amidohydrolase
FOC87_22485	COG1131	(ABC) transporter
FOC87_22495	COG0583	DNA-binding transcription factor activity
FOC87_22505	COG1346	cytolysis
FOC87_22520	COG0730	response to heat
FOC87_22530	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC87_22530	COG3409	Peptidoglycan-binding domain 1 protein
FOC87_22545	COG1132	(ABC) transporter
FOC87_22550	COG1132	(ABC) transporter
FOC87_22575	COG3639	organic phosphonate transmembrane transporter activity
FOC87_22590	COG0737	Belongs to the 5'-nucleotidase family
FOC87_22600	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOC87_22620	COG1695	Transcriptional regulator
FOC87_22625	COG0174	glutamine synthetase
FOC87_22630	COG0789	Transcriptional regulator
FOC87_22635	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
FOC87_22640	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOC87_22645	COG2860	membrane
FOC87_22650	COG0464	growth
FOC87_22680	COG1388	LysM domain
FOC87_22680	COG3584	3D domain protein
FOC87_22685	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC87_22685	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC87_22685	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC87_22690	COG1105	Belongs to the carbohydrate kinase PfkB family
FOC87_22695	COG1349	DNA-binding transcription factor activity
FOC87_22700	COG1979	alcohol dehydrogenase
FOC87_22705	COG2322	membrane
FOC87_22715	COG1113	amino acid transport
FOC87_22730	COG1408	metallophosphoesterase
FOC87_22735	COG2116	formate transmembrane transporter activity
FOC87_22745	COG2217	Heavy metal translocating P-type atpase
FOC87_22750	COG2608	mercury ion transmembrane transporter activity
FOC87_22755	COG1937	Protein conserved in bacteria
FOC87_22775	COG2819	hydrolase of the alpha beta superfamily
FOC87_22780	COG1120	ATPase activity
FOC87_22785	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_22790	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC87_22795	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC87_22800	COG0708	Exodeoxyribonuclease III
FOC87_22805	COG2169	Transcriptional regulator
FOC87_22810	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC87_22815	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC87_22825	COG2364	Membrane
FOC87_22840	COG2267	carboxylic ester hydrolase activity
FOC87_22845	COG0346	lactoylglutathione lyase activity
FOC87_22850	COG3300	MHYT domain
FOC87_22850	COG5001	Diguanylate cyclase
FOC87_22910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC87_22935	COG1404	Belongs to the peptidase S8 family
FOC87_22940	COG3773	Cell wall hydrolase
FOC87_22950	COG1368	sulfuric ester hydrolase activity
FOC87_22955	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC87_22965	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FOC87_22985	COG4550	Control of competence regulator ComK, YlbF/YmcA
FOC87_22995	COG1013	pyruvate-flavodoxin oxidoreductase activity
FOC87_23000	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FOC87_23000	COG0674	pyruvate-flavodoxin oxidoreductase activity
FOC87_23010	COG2359	stage V sporulation protein S
FOC87_23015	COG1692	metallophosphoesterase
FOC87_23035	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOC87_23040	COG1426	Protein conserved in bacteria
FOC87_23055	COG0300	oxidoreductase activity
FOC87_23060	COG0612	Peptidase, M16
FOC87_23065	COG0612	Peptidase, M16
FOC87_23090	COG2188	Transcriptional regulator
FOC87_23095	COG1674	ftsk spoiiie
FOC87_23105	COG0740	serine-type endopeptidase activity
FOC87_23110	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC87_23120	COG0527	aspartate kinase activity
FOC87_23125	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC87_23130	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC87_23135	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC87_23140	COG1873	PFAM PRC-barrel domain
FOC87_23145	COG0612	Peptidase, M16
FOC87_23150	COG0726	polysaccharide deacetylase
FOC87_23165	COG0196	riboflavin kinase activity
FOC87_23180	COG1550	Protein conserved in bacteria
FOC87_23190	COG1358	cellular component organization or biogenesis
FOC87_23195	COG2740	Nucleic-acid-binding protein implicated in transcription termination
FOC87_23200	COG0195	Participates in both transcription termination and antitermination
FOC87_23230	COG0750	zinc metalloprotease
FOC87_23240	COG4589	Belongs to the CDS family
FOC87_23255	COG0528	UMP kinase activity
FOC87_23285	COG4974	Belongs to the 'phage' integrase family
FOC87_23295	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC87_23300	COG0758	DNA mediated transformation
FOC87_23305	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOC87_23345	COG1837	Belongs to the UPF0109 family
FOC87_23355	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOC87_23365	COG0552	protein localization to endoplasmic reticulum
FOC87_23370	COG1196	nuclear chromosome segregation
FOC87_23380	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC87_23385	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_23390	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FOC87_23405	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOC87_23410	COG1461	Dihydroxyacetone kinase
FOC87_23415	COG1302	Protein conserved in bacteria
FOC87_23430	COG1564	THIamine pyrophosphokinase
FOC87_23435	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOC87_23440	COG1162	GTPase activity
FOC87_23445	COG2815	serine threonine protein kinase
FOC87_23445	COG0515	serine threonine protein kinase
FOC87_23450	COG0631	protein serine/threonine phosphatase activity
FOC87_23460	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC87_23460	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC87_23470	COG0242	peptide deformylase activity
FOC87_23475	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOC87_23480	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC87_23500	COG1561	YicC-like family, N-terminal region
FOC87_23505	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOC87_23515	COG0006	proline dipeptidase activity
FOC87_23535	COG3069	C4-dicarboxylate transmembrane transporter activity
FOC87_23605	COG0564	pseudouridine synthase activity
FOC87_23625	COG3599	regulation of cell shape
FOC87_23630	COG2302	S4 RNA-binding domain
FOC87_23635	COG0762	integral membrane protein
FOC87_23645	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOC87_23655	COG1873	PFAM PRC-barrel domain
FOC87_23660	COG1191	sigma factor activity
FOC87_23665	COG1191	sigma factor activity
FOC87_23675	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOC87_23680	COG0849	cell division
FOC87_23685	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FOC87_23690	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOC87_23700	COG0772	Belongs to the SEDS family
FOC87_23715	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC87_23720	COG0768	penicillin binding
FOC87_23730	COG4839	cell division protein FtsL
FOC87_23745	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC87_23760	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOC87_23765	COG1399	metal-binding, possibly nucleic acid-binding protein
FOC87_23775	COG3480	Lon protease (S16) C-terminal proteolytic domain
FOC87_23780	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC87_23785	COG3314	Sporulation integral membrane protein YlbJ
FOC87_23795	COG0742	ribosomal rna small subunit methyltransferase
FOC87_23810	COG3679	Belongs to the UPF0342 family
FOC87_23815	COG0406	alpha-ribazole phosphatase activity
FOC87_23830	COG2340	Cysteine-rich secretory protein family
FOC87_23845	COG3336	cytochrome c oxidase
FOC87_23880	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FOC87_23885	COG0772	Belongs to the SEDS family
FOC87_23895	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC87_23900	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FOC87_23910	COG4896	Protein conserved in bacteria
FOC87_23935	COG0483	inositol monophosphate 1-phosphatase activity
FOC87_23955	COG1982	Orn Lys Arg decarboxylase major
FOC87_24005	COG0022	dehydrogenase e1 component
FOC87_24010	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC87_24020	COG0242	peptide deformylase activity
FOC87_24025	COG0561	phosphatase activity
FOC87_24035	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC87_24040	COG0569	domain protein
FOC87_24060	COG0583	DNA-binding transcription factor activity
FOC87_24065	COG0517	IMP dehydrogenase activity
FOC87_24075	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
FOC87_24085	COG4703	Protein of unknown function (DUF1797)
FOC87_24100	COG2200	EAL domain
FOC87_24105	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_24110	COG1408	metallophosphoesterase
FOC87_24120	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FOC87_24155	COG2814	Major facilitator Superfamily
FOC87_24175	COG3209	COG3209 Rhs family protein
FOC87_24185	COG2205	protein histidine kinase activity
FOC87_24195	COG0436	Aminotransferase
FOC87_24200	COG1609	Transcriptional regulator
FOC87_24205	COG3833	ABC-type maltose transport systems, permease component
FOC87_24210	COG1175	transmembrane transport
FOC87_24215	COG2182	Extracellular solute-binding protein
FOC87_24225	COG0366	Alpha amylase catalytic
FOC87_24230	COG3842	ATPase activity
FOC87_24270	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FOC87_24275	COG0183	Belongs to the thiolase family
FOC87_24305	COG1695	Transcriptional regulator
FOC87_24310	COG1028	Short-chain dehydrogenase reductase Sdr
FOC87_24330	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC87_24335	COG0436	Aminotransferase
FOC87_24370	COG2084	Dehydrogenase
FOC87_24375	COG2199	diguanylate cyclase activity
FOC87_24375	COG2203	Gaf domain
FOC87_24380	COG0778	Nitroreductase
FOC87_24405	COG2190	(PTS) system
FOC87_24405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC87_24405	COG1263	PTS System
FOC87_24410	COG3711	transcriptional antiterminator
FOC87_24420	COG2188	Transcriptional regulator
FOC87_24430	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOC87_24455	COG1547	Domain of unknown function (DUF309)
FOC87_24460	COG0456	acetyltransferase
FOC87_24465	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOC87_24470	COG4086	secreted protein
FOC87_24475	COG0561	phosphatase activity
FOC87_24480	COG0697	spore germination
FOC87_24495	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC87_24520	COG0733	neurotransmitter:sodium symporter activity
FOC87_24540	COG1686	Belongs to the peptidase S11 family
FOC87_24545	COG1725	Transcriptional regulator
FOC87_24550	COG1131	(ABC) transporter
FOC87_24565	COG1846	Transcriptional regulator
FOC87_24580	COG0598	Magnesium transport protein CorA
FOC87_24605	COG4974	Belongs to the 'phage' integrase family
FOC87_24615	COG0735	belongs to the Fur family
FOC87_24620	COG1300	Membrane
FOC87_24640	COG0667	Aldo Keto reductase
FOC87_24645	COG0656	L-ascorbic acid biosynthetic process
FOC87_24650	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC87_24650	COG0456	acetyltransferase
FOC87_24660	COG0737	Belongs to the 5'-nucleotidase family
FOC87_24660	COG1525	nuclease
FOC87_24660	COG4085	toxin activity
FOC87_24670	COG0596	Alpha beta hydrolase
FOC87_24675	COG2056	Na+-H+ antiporter family
FOC87_24680	COG1609	Transcriptional regulator
FOC87_24685	COG0456	acetyltransferase
FOC87_24690	COG1073	alpha beta
FOC87_24705	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC87_24705	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC87_24710	COG0307	riboflavin synthase, alpha
FOC87_24735	COG4106	trans-aconitate 2-methyltransferase activity
FOC87_24740	COG1073	alpha beta
FOC87_24740	COG2226	methyltransferase
FOC87_24755	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC87_24770	COG0737	Belongs to the 5'-nucleotidase family
FOC87_24780	COG1522	sequence-specific DNA binding
FOC87_24800	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC87_24810	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FOC87_24825	COG0300	oxidoreductase activity
FOC87_24830	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_24835	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC87_24840	COG1760	l-serine dehydratase
FOC87_24845	COG1760	l-serine dehydratase
FOC87_24865	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC87_24875	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC87_24880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC87_24895	COG1376	ErfK ybiS ycfS ynhG family protein
FOC87_24900	COG4129	membrane
FOC87_24905	COG1126	abc transporter atp-binding protein
FOC87_24910	COG0765	amino acid transport
FOC87_24915	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC87_24930	COG2816	NAD+ diphosphatase activity
FOC87_24935	COG0772	Belongs to the SEDS family
FOC87_24940	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC87_24945	COG0022	dehydrogenase e1 component
FOC87_24950	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC87_24955	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC87_24970	COG0280	phosphate acetyltransferase
FOC87_24975	COG3290	protein histidine kinase activity
FOC87_24975	COG3829	transcription factor binding
FOC87_24985	COG0584	glycerophosphoryl diester phosphodiesterase
FOC87_24990	COG3093	addiction module antidote protein HigA
FOC87_25000	COG0745	RESPONSE REGULATOR receiver
FOC87_25005	COG0750	zinc metalloprotease
FOC87_25010	COG0497	DNA recombination
FOC87_25020	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FOC87_25030	COG0142	geranyltranstransferase activity
FOC87_25055	COG1302	Protein conserved in bacteria
FOC87_25060	COG0439	Biotin carboxylase
FOC87_25065	COG0511	ligase activity, forming carbon-carbon bonds
FOC87_25110	COG3854	ATPases associated with a variety of cellular activities
FOC87_25135	COG0006	proline dipeptidase activity
FOC87_25150	COG3872	metal-dependent enzyme
FOC87_25160	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC87_25175	COG1695	Transcriptional regulator
FOC87_25190	COG0095	Lipoate-protein ligase
FOC87_25195	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC87_25200	COG1609	Transcriptional regulator
FOC87_25210	COG2076	Multidrug Resistance protein
FOC87_25215	COG2076	Multidrug Resistance protein
FOC87_25250	COG1131	(ABC) transporter
FOC87_25255	COG1725	Transcriptional regulator
FOC87_25285	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC87_25340	COG4970	Tfp pilus assembly protein FimT
FOC87_25350	COG1459	type II secretion system
FOC87_25355	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOC87_25405	COG1410	methionine synthase
FOC87_25405	COG0646	methionine synthase
FOC87_25410	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FOC87_25410	COG0646	methionine synthase
FOC87_25415	COG0626	cystathionine gamma-synthase activity
FOC87_25420	COG0626	cystathionine gamma-synthase activity
FOC87_25440	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC87_25450	COG1940	carbohydrate kinase activity
FOC87_25455	COG4483	Protein conserved in bacteria
FOC87_25460	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOC87_25465	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOC87_25470	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FOC87_25475	COG0704	Plays a role in the regulation of phosphate uptake
FOC87_25485	COG0581	inorganic phosphate transmembrane transporter activity
FOC87_25490	COG0573	inorganic phosphate transmembrane transporter activity
FOC87_25495	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC87_25505	COG0477	Major facilitator Superfamily
FOC87_25510	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC87_25535	COG0735	belongs to the Fur family
FOC87_25540	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOC87_25545	COG1121	(ABC) transporter
FOC87_25550	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC87_25580	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC87_25585	COG2384	SAM-dependent methyltransferase
FOC87_25590	COG2010	Cytochrome c
FOC87_25595	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOC87_25600	COG0358	DNA primase activity
FOC87_25615	COG0517	IMP dehydrogenase activity
FOC87_25630	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOC87_25635	COG0295	cytidine deaminase activity
FOC87_25640	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOC87_25650	COG1480	7TM receptor with intracellular HD hydrolase
FOC87_25655	COG1702	phosphate starvation-inducible protein PhoH
FOC87_25670	COG1610	YqeY-like protein
FOC87_25675	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOC87_25680	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC87_25685	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOC87_25715	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC87_25720	COG1733	regulation of RNA biosynthetic process
FOC87_25745	COG1466	dna polymerase III delta subunit
FOC87_25755	COG0658	competence protein
FOC87_25755	COG2333	competence protein COMEC
FOC87_25760	COG2131	deaminase
FOC87_25765	COG1596	polysaccharide export
FOC87_25765	COG1555	photosystem II stabilization
FOC87_25770	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC87_25775	COG2226	methyltransferase
FOC87_25780	COG0799	negative regulation of ribosome biogenesis
FOC87_25785	COG1713	HD superfamily hydrolase involved in NAD metabolism
FOC87_25795	COG1534	Rna-binding protein
FOC87_25805	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FOC87_25810	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
FOC87_25855	COG0778	Nitroreductase
FOC87_25860	COG2357	RelA SpoT domain protein
FOC87_25870	COG1785	Belongs to the alkaline phosphatase family
FOC87_25880	COG2267	carboxylic ester hydrolase activity
FOC87_25915	COG1404	Belongs to the peptidase S8 family
FOC87_25920	COG3186	Phenylalanine-4-hydroxylase
FOC87_25930	COG2514	catechol 2,3-dioxygenase activity
FOC87_25935	COG2259	Doxx family
FOC87_25975	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC87_25985	COG1012	belongs to the aldehyde dehydrogenase family
FOC87_25985	COG1454	alcohol dehydrogenase
FOC87_25990	COG0626	cystathionine gamma-synthase activity
FOC87_25995	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC87_26020	COG0768	penicillin binding
FOC87_26045	COG4122	O-methyltransferase activity
FOC87_26050	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOC87_26080	COG0628	permease
FOC87_26100	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOC87_26115	COG1104	cysteine desulfurase activity
FOC87_26120	COG1959	2 iron, 2 sulfur cluster binding
FOC87_26125	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOC87_26135	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOC87_26160	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC87_26170	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOC87_26170	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
FOC87_26175	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC87_26180	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC87_26180	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC87_26190	COG2244	polysaccharide biosynthetic process
FOC87_26195	COG2323	membrane
FOC87_26205	COG1862	Preprotein translocase
FOC87_26235	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FOC87_26245	COG0697	spore germination
FOC87_26250	COG0640	Transcriptional regulator
FOC87_26275	COG0157	Belongs to the NadC ModD family
FOC87_26280	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOC87_26285	COG1104	cysteine desulfurase activity
FOC87_26290	COG1827	regulation of RNA biosynthetic process
FOC87_26295	COG2258	MOSC domain
FOC87_26300	COG0077	Prephenate dehydratase
FOC87_26305	COG0577	efflux transmembrane transporter activity
FOC87_26310	COG0577	efflux transmembrane transporter activity
FOC87_26315	COG1136	(ABC) transporter
FOC87_26320	COG5002	protein histidine kinase activity
FOC87_26325	COG0745	RESPONSE REGULATOR receiver
FOC87_26335	COG3290	protein histidine kinase activity
FOC87_26345	COG2868	ribosomal protein
FOC87_26355	COG1530	ribonuclease E activity
FOC87_26360	COG1994	Peptidase M50
FOC87_26365	COG0739	heme binding
FOC87_26370	COG2894	cell division
FOC87_26390	COG1077	Cell shape determining protein MreB Mrl
FOC87_26470	COG0285	dihydrofolate synthase activity
FOC87_26485	COG1388	LysM domain
FOC87_26495	COG0113	porphobilinogen synthase activity
FOC87_26500	COG1587	Uroporphyrinogen-III synthase
FOC87_26510	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC87_26520	COG1846	Transcriptional regulator
FOC87_26525	COG1764	response to oxidative stress
FOC87_26540	COG0470	DNA polymerase III
FOC87_26540	COG1067	ATP-dependent peptidase activity
FOC87_26585	COG0622	Phosphoesterase
FOC87_26600	COG5401	PFAM Sporulation and spore germination
FOC87_26620	COG1309	transcriptional regulator
FOC87_26635	COG2197	response regulator
FOC87_26640	COG2233	PERMEase
FOC87_26645	COG0402	S-adenosylhomocysteine deaminase activity
FOC87_26650	COG1983	PspC domain protein
FOC87_26655	COG1396	sequence-specific DNA binding
FOC87_26660	COG0697	spore germination
FOC87_26670	COG1959	2 iron, 2 sulfur cluster binding
FOC87_26675	COG1668	transmembrane transport
FOC87_26680	COG4152	abc transporter atp-binding protein
FOC87_26685	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
FOC87_26690	COG1360	Flagellar Motor Protein
FOC87_26695	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC87_26700	COG1876	peptidase activity
FOC87_26705	COG0824	Thioesterase
FOC87_26710	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOC87_26715	COG1053	succinate dehydrogenase
FOC87_26720	COG2009	succinate dehydrogenase
FOC87_26725	COG1719	4-vinyl reductase, 4VR
FOC87_26735	COG3118	belongs to the thioredoxin family
FOC87_26740	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FOC87_26745	COG2086	electron transfer activity
FOC87_26750	COG1024	Enoyl-CoA hydratase
FOC87_26755	COG1309	transcriptional regulator
FOC87_26760	COG0318	PFAM AMP-dependent synthetase and ligase
FOC87_26780	COG2318	DinB family
FOC87_26805	COG1131	(ABC) transporter
FOC87_26810	COG2205	protein histidine kinase activity
FOC87_26815	COG0745	RESPONSE REGULATOR receiver
FOC87_26825	COG4895	conserved protein (DUF2196)
FOC87_26830	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOC87_26845	COG4509	Sortase family
FOC87_26850	COG1120	ATPase activity
FOC87_26865	COG5386	Cell surface protein
FOC87_26870	COG5386	Cell surface protein
FOC87_26875	COG1114	Component of the transport system for branched-chain amino acids
FOC87_26880	COG1187	pseudouridine synthase activity
FOC87_26890	COG1796	DNA polymerase
FOC87_26890	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC87_26895	COG1286	toxin biosynthetic process
FOC87_26940	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC87_26950	COG1418	mRNA catabolic process
FOC87_26985	COG2814	Major facilitator Superfamily
FOC87_26990	COG1566	PFAM secretion protein HlyD family protein
FOC87_26995	COG1309	transcriptional regulator
FOC87_27000	COG1363	Peptidase, m42
FOC87_27025	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC87_27035	COG1484	DNA-dependent DNA replication
FOC87_27055	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC87_27165	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FOC87_27170	COG2369	cell adhesion
FOC87_27175	COG5518	Phage portal protein
FOC87_27185	COG5484	DNA packaging
FOC87_27185	COG3728	DNA packaging
FOC87_27190	COG0322	excinuclease ABC activity
FOC87_27290	COG1484	DNA-dependent DNA replication
FOC87_27320	COG3617	BRO family, N-terminal domain
FOC87_27330	COG1396	sequence-specific DNA binding
FOC87_27385	COG1192	Involved in chromosome partitioning