locus-tag	class	description
FOC89_00065	COG1396	sequence-specific DNA binding
FOC89_00115	COG1484	DNA-dependent DNA replication
FOC89_00150	COG0756	dUTP diphosphatase activity
FOC89_00200	COG5484	DNA packaging
FOC89_00210	COG5518	Phage portal protein
FOC89_00215	COG2369	cell adhesion
FOC89_00220	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FOC89_00225	COG4653	Phage capsid family
FOC89_00300	COG4824	toxin secretion phage lysis holin
FOC89_00315	COG5444	nuclease activity
FOC89_00325	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC89_00350	COG2329	Antibiotic biosynthesis monooxygenase
FOC89_00370	COG1192	Involved in chromosome partitioning
FOC89_00390	COG3012	SEC-C Motif Domain Protein
FOC89_00390	COG1405	negative regulation of cell septum assembly
FOC89_00405	COG3104	oligopeptide transport
FOC89_00450	COG0842	Transport permease protein
FOC89_00455	COG1131	(ABC) transporter
FOC89_00510	COG4974	Belongs to the 'phage' integrase family
FOC89_00550	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC89_00550	COG0551	DNA topoisomerase type I activity
FOC89_00630	COG0741	lytic transglycosylase activity
FOC89_00630	COG0791	NLP P60 protein
FOC89_00805	COG1192	Involved in chromosome partitioning
FOC89_00830	COG4166	transmembrane transport
FOC89_00870	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC89_00915	COG0210	DNA helicase
FOC89_01190	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC89_01190	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC89_01210	COG3764	Sortase (surface protein transpeptidase)
FOC89_01340	COG4990	cell redox homeostasis
FOC89_01480	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC89_01750	COG0187	DNA topoisomerase II activity
FOC89_01755	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC89_01820	COG0358	DNA primase activity
FOC89_02030	COG1876	peptidase activity
FOC89_02185	COG5263	repeat protein
FOC89_02185	COG4193	domain, Protein
FOC89_02320	COG3409	Peptidoglycan-binding domain 1 protein
FOC89_02320	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC89_02325	COG3409	Peptidoglycan-binding domain 1 protein
FOC89_02325	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC89_02475	COG3091	SprT-like family
FOC89_02560	COG3481	metal-dependent phosphohydrolase, HD sub domain
FOC89_02635	COG2815	serine threonine protein kinase
FOC89_02635	COG0515	serine threonine protein kinase
FOC89_03055	COG0484	heat shock protein binding
FOC89_03145	COG1288	antiporter activity
FOC89_03160	COG2814	Major facilitator Superfamily
FOC89_03165	COG1309	transcriptional regulator
FOC89_03175	COG3620	sequence-specific DNA binding
FOC89_03180	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOC89_03200	COG1733	regulation of RNA biosynthetic process
FOC89_03205	COG0778	Nitroreductase
FOC89_03225	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_03235	COG1131	(ABC) transporter
FOC89_03260	COG1011	Hydrolase
FOC89_03295	COG0346	lactoylglutathione lyase activity
FOC89_03300	COG1940	carbohydrate kinase activity
FOC89_03305	COG0738	Major facilitator superfamily
FOC89_03310	COG0110	maltose O-acetyltransferase activity
FOC89_03320	COG1136	(ABC) transporter
FOC89_03320	COG0577	efflux transmembrane transporter activity
FOC89_03340	COG0628	permease
FOC89_03360	COG2226	methyltransferase
FOC89_03370	COG0477	Major facilitator Superfamily
FOC89_03400	COG1253	flavin adenine dinucleotide binding
FOC89_03405	COG0789	Transcriptional regulator
FOC89_03410	COG0697	spore germination
FOC89_03415	COG1357	PFAM Pentapeptide repeats (8 copies)
FOC89_03420	COG3813	Protein conserved in bacteria
FOC89_03425	COG2706	6-phosphogluconolactonase activity
FOC89_03430	COG1070	Carbohydrate kinase
FOC89_03440	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOC89_03445	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FOC89_03455	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOC89_03470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC89_03490	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_03530	COG0814	amino acid
FOC89_03555	COG1393	Belongs to the ArsC family
FOC89_03560	COG1733	regulation of RNA biosynthetic process
FOC89_03565	COG2188	Transcriptional regulator
FOC89_03570	COG0673	inositol 2-dehydrogenase activity
FOC89_03575	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC89_03580	COG1733	regulation of RNA biosynthetic process
FOC89_03585	COG1733	regulation of RNA biosynthetic process
FOC89_03605	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_03625	COG0384	phenazine biosynthesis protein PhzF
FOC89_03635	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_03645	COG0318	PFAM AMP-dependent synthetase and ligase
FOC89_03650	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC89_03655	COG1733	regulation of RNA biosynthetic process
FOC89_03675	COG1191	sigma factor activity
FOC89_03690	COG1309	transcriptional regulator
FOC89_03710	COG3152	Membrane
FOC89_03735	COG1151	hydroxylamine reductase activity
FOC89_03745	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_03785	COG2072	flavoprotein involved in K transport
FOC89_03820	COG0604	alcohol dehydrogenase
FOC89_03825	COG1113	amino acid transport
FOC89_03830	COG2814	Major facilitator Superfamily
FOC89_03860	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC89_03865	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC89_03880	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC89_03885	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_03890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_03895	COG3739	integral membrane protein
FOC89_03900	COG0384	phenazine biosynthesis protein PhzF
FOC89_03930	COG0583	DNA-binding transcription factor activity
FOC89_03950	COG1193	negative regulation of DNA recombination
FOC89_03965	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FOC89_03970	COG1164	Oligoendopeptidase f
FOC89_03975	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC89_04005	COG0584	glycerophosphoryl diester phosphodiesterase
FOC89_04030	COG0640	Transcriptional regulator
FOC89_04035	COG0604	alcohol dehydrogenase
FOC89_04080	COG2808	Putative FMN-binding domain
FOC89_04085	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC89_04095	COG0385	Bile acid
FOC89_04100	COG0277	FAD linked oxidase domain protein
FOC89_04130	COG1216	Glycosyl transferase, family 2
FOC89_04135	COG1024	Enoyl-CoA hydratase
FOC89_04145	COG1285	pathogenesis
FOC89_04160	COG2514	catechol 2,3-dioxygenase activity
FOC89_04165	COG2720	vancomycin resistance protein
FOC89_04205	COG0716	FMN binding
FOC89_04255	COG0739	heme binding
FOC89_04270	COG3757	hydrolase, family 25
FOC89_04270	COG3409	Peptidoglycan-binding domain 1 protein
FOC89_04275	COG0739	heme binding
FOC89_04330	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_04340	COG0165	Argininosuccinate lyase
FOC89_04355	COG4145	pantothenate transmembrane transporter activity
FOC89_04360	COG3924	membrane
FOC89_04365	COG1012	belongs to the aldehyde dehydrogenase family
FOC89_04370	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_04380	COG1657	PFAM Prenyltransferase squalene oxidase
FOC89_04385	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
FOC89_04390	COG2962	Rard protein
FOC89_04395	COG3326	Membrane
FOC89_04410	COG0489	protein tyrosine kinase activity
FOC89_04420	COG0314	molybdopterin synthase activity
FOC89_04425	COG0303	'Molybdopterin
FOC89_04430	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC89_04435	COG2116	formate transmembrane transporter activity
FOC89_04445	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC89_04450	COG5609	conserved protein (DUF2294)
FOC89_04455	COG2427	Protein of unknown function (DUF1641)
FOC89_04460	COG3383	formate dehydrogenase (NAD+) activity
FOC89_04470	COG0697	spore germination
FOC89_04510	COG2226	methyltransferase
FOC89_04515	COG4166	transmembrane transport
FOC89_04525	COG4166	transmembrane transport
FOC89_04530	COG4166	transmembrane transport
FOC89_04535	COG1301	dicarboxylic acid transport
FOC89_04540	COG1316	TRANSCRIPTIONal
FOC89_04550	COG1595	DNA-templated transcription, initiation
FOC89_04570	COG1131	(ABC) transporter
FOC89_04580	COG0673	inositol 2-dehydrogenase activity
FOC89_04585	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC89_04590	COG0187	DNA topoisomerase II activity
FOC89_04595	COG1832	CoA-binding protein
FOC89_04600	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC89_04605	COG0745	RESPONSE REGULATOR receiver
FOC89_04625	COG4841	protein insertion into membrane
FOC89_04630	COG0824	Thioesterase
FOC89_04660	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC89_04670	COG2274	protein secretion by the type I secretion system
FOC89_04675	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC89_04715	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC89_04730	COG0183	Belongs to the thiolase family
FOC89_04735	COG0318	PFAM AMP-dependent synthetase and ligase
FOC89_04740	COG1268	BioY protein
FOC89_04745	COG0318	PFAM AMP-dependent synthetase and ligase
FOC89_04795	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_04805	COG5002	protein histidine kinase activity
FOC89_04810	COG0400	carboxylic ester hydrolase activity
FOC89_04815	COG0346	lactoylglutathione lyase activity
FOC89_04820	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC89_04825	COG0069	glutamate synthase activity
FOC89_04830	COG1902	pentaerythritol trinitrate reductase activity
FOC89_04835	COG1329	Transcriptional regulator
FOC89_04840	COG0010	Belongs to the arginase family
FOC89_04900	COG4846	Membrane protein involved in cytochrome C biogenesis
FOC89_04905	COG0785	Cytochrome C biogenesis protein
FOC89_04915	COG1473	amidohydrolase
FOC89_04925	COG1131	(ABC) transporter
FOC89_04935	COG0583	DNA-binding transcription factor activity
FOC89_04945	COG1346	cytolysis
FOC89_04960	COG0730	response to heat
FOC89_04970	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC89_04970	COG3409	Peptidoglycan-binding domain 1 protein
FOC89_04985	COG1132	(ABC) transporter
FOC89_04990	COG1132	(ABC) transporter
FOC89_05020	COG3639	organic phosphonate transmembrane transporter activity
FOC89_05025	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC89_05030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC89_05035	COG0737	Belongs to the 5'-nucleotidase family
FOC89_05045	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOC89_05065	COG1695	Transcriptional regulator
FOC89_05080	COG5444	nuclease activity
FOC89_05095	COG0174	glutamine synthetase
FOC89_05100	COG0789	Transcriptional regulator
FOC89_05105	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
FOC89_05110	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOC89_05115	COG2860	membrane
FOC89_05120	COG0464	growth
FOC89_05150	COG1388	LysM domain
FOC89_05150	COG3584	3D domain protein
FOC89_05155	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC89_05155	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC89_05155	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC89_05160	COG1105	Belongs to the carbohydrate kinase PfkB family
FOC89_05165	COG1349	DNA-binding transcription factor activity
FOC89_05170	COG1979	alcohol dehydrogenase
FOC89_05175	COG2322	membrane
FOC89_05185	COG1113	amino acid transport
FOC89_05200	COG1408	metallophosphoesterase
FOC89_05205	COG2116	formate transmembrane transporter activity
FOC89_05220	COG2217	Heavy metal translocating P-type atpase
FOC89_05225	COG2608	mercury ion transmembrane transporter activity
FOC89_05230	COG1937	Protein conserved in bacteria
FOC89_05240	COG2819	hydrolase of the alpha beta superfamily
FOC89_05245	COG1120	ATPase activity
FOC89_05250	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_05255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_05260	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC89_05265	COG0708	Exodeoxyribonuclease III
FOC89_05270	COG2169	Transcriptional regulator
FOC89_05275	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC89_05280	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC89_05290	COG2364	Membrane
FOC89_05305	COG2267	carboxylic ester hydrolase activity
FOC89_05310	COG0346	lactoylglutathione lyase activity
FOC89_05315	COG5001	Diguanylate cyclase
FOC89_05315	COG3300	MHYT domain
FOC89_05330	COG1346	cytolysis
FOC89_05335	COG1380	Effector of murein hydrolase LrgA
FOC89_05340	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC89_05350	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC89_05370	COG1404	Belongs to the peptidase S8 family
FOC89_05375	COG3773	Cell wall hydrolase
FOC89_05380	COG0562	UDP-galactopyranose mutase
FOC89_05385	COG1368	sulfuric ester hydrolase activity
FOC89_05390	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC89_05400	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FOC89_05420	COG4550	Control of competence regulator ComK, YlbF/YmcA
FOC89_05430	COG1013	pyruvate-flavodoxin oxidoreductase activity
FOC89_05435	COG0674	pyruvate-flavodoxin oxidoreductase activity
FOC89_05435	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FOC89_05445	COG2359	stage V sporulation protein S
FOC89_05450	COG1692	metallophosphoesterase
FOC89_05475	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOC89_05480	COG1426	Protein conserved in bacteria
FOC89_05495	COG0300	oxidoreductase activity
FOC89_05500	COG0612	Peptidase, M16
FOC89_05505	COG0612	Peptidase, M16
FOC89_05530	COG2188	Transcriptional regulator
FOC89_05535	COG1674	ftsk spoiiie
FOC89_05545	COG0740	serine-type endopeptidase activity
FOC89_05550	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC89_05560	COG0527	aspartate kinase activity
FOC89_05565	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC89_05570	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC89_05575	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC89_05580	COG1873	PFAM PRC-barrel domain
FOC89_05585	COG0612	Peptidase, M16
FOC89_05590	COG0726	polysaccharide deacetylase
FOC89_05605	COG0196	riboflavin kinase activity
FOC89_05610	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOC89_05620	COG1550	Protein conserved in bacteria
FOC89_05630	COG1358	cellular component organization or biogenesis
FOC89_05635	COG2740	Nucleic-acid-binding protein implicated in transcription termination
FOC89_05640	COG0195	Participates in both transcription termination and antitermination
FOC89_05660	COG0750	zinc metalloprotease
FOC89_05670	COG4589	Belongs to the CDS family
FOC89_05685	COG0528	UMP kinase activity
FOC89_05715	COG4974	Belongs to the 'phage' integrase family
FOC89_05725	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC89_05730	COG0758	DNA mediated transformation
FOC89_05735	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOC89_05775	COG1837	Belongs to the UPF0109 family
FOC89_05785	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOC89_05795	COG0552	protein localization to endoplasmic reticulum
FOC89_05800	COG1196	nuclear chromosome segregation
FOC89_05810	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC89_05815	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_05820	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FOC89_05835	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOC89_05840	COG1461	Dihydroxyacetone kinase
FOC89_05845	COG1302	Protein conserved in bacteria
FOC89_05860	COG1564	THIamine pyrophosphokinase
FOC89_05865	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOC89_05870	COG1162	GTPase activity
FOC89_05875	COG2815	serine threonine protein kinase
FOC89_05875	COG0515	serine threonine protein kinase
FOC89_05880	COG0631	protein serine/threonine phosphatase activity
FOC89_05890	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC89_05890	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC89_05900	COG0242	peptide deformylase activity
FOC89_05905	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOC89_05910	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC89_05930	COG1561	YicC-like family, N-terminal region
FOC89_05935	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOC89_05945	COG0006	proline dipeptidase activity
FOC89_05965	COG3069	C4-dicarboxylate transmembrane transporter activity
FOC89_06030	COG0564	pseudouridine synthase activity
FOC89_06050	COG3599	regulation of cell shape
FOC89_06055	COG2302	S4 RNA-binding domain
FOC89_06060	COG0762	integral membrane protein
FOC89_06070	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOC89_06080	COG1873	PFAM PRC-barrel domain
FOC89_06085	COG1191	sigma factor activity
FOC89_06090	COG1191	sigma factor activity
FOC89_06100	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOC89_06105	COG0849	cell division
FOC89_06110	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FOC89_06115	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOC89_06125	COG0772	Belongs to the SEDS family
FOC89_06140	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC89_06145	COG0768	penicillin binding
FOC89_06155	COG4839	cell division protein FtsL
FOC89_06170	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC89_06185	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOC89_06190	COG1399	metal-binding, possibly nucleic acid-binding protein
FOC89_06200	COG3480	Lon protease (S16) C-terminal proteolytic domain
FOC89_06205	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC89_06210	COG3314	Sporulation integral membrane protein YlbJ
FOC89_06220	COG0742	ribosomal rna small subunit methyltransferase
FOC89_06235	COG3679	Belongs to the UPF0342 family
FOC89_06240	COG0406	alpha-ribazole phosphatase activity
FOC89_06255	COG2340	Cysteine-rich secretory protein family
FOC89_06270	COG3336	cytochrome c oxidase
FOC89_06305	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FOC89_06310	COG0772	Belongs to the SEDS family
FOC89_06320	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC89_06325	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FOC89_06335	COG4896	Protein conserved in bacteria
FOC89_06360	COG0483	inositol monophosphate 1-phosphatase activity
FOC89_06380	COG1982	Orn Lys Arg decarboxylase major
FOC89_06430	COG0022	dehydrogenase e1 component
FOC89_06435	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC89_06445	COG0242	peptide deformylase activity
FOC89_06450	COG0561	phosphatase activity
FOC89_06460	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC89_06465	COG0569	domain protein
FOC89_06485	COG0583	DNA-binding transcription factor activity
FOC89_06490	COG0517	IMP dehydrogenase activity
FOC89_06500	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
FOC89_06510	COG4703	Protein of unknown function (DUF1797)
FOC89_06525	COG2200	EAL domain
FOC89_06530	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_06535	COG1408	metallophosphoesterase
FOC89_06545	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FOC89_06580	COG2814	Major facilitator Superfamily
FOC89_06600	COG3209	COG3209 Rhs family protein
FOC89_06610	COG2205	protein histidine kinase activity
FOC89_06620	COG0436	Aminotransferase
FOC89_06625	COG1609	Transcriptional regulator
FOC89_06630	COG3833	ABC-type maltose transport systems, permease component
FOC89_06635	COG1175	transmembrane transport
FOC89_06640	COG2182	Extracellular solute-binding protein
FOC89_06650	COG0366	Alpha amylase catalytic
FOC89_06655	COG3842	ATPase activity
FOC89_06695	COG0183	Belongs to the thiolase family
FOC89_06730	COG1695	Transcriptional regulator
FOC89_06735	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_06755	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC89_06760	COG0436	Aminotransferase
FOC89_06795	COG2084	Dehydrogenase
FOC89_06800	COG3706	GGDEF domain
FOC89_06805	COG0778	Nitroreductase
FOC89_06830	COG2190	(PTS) system
FOC89_06830	COG1263	PTS System
FOC89_06830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC89_06835	COG3711	transcriptional antiterminator
FOC89_06845	COG2188	Transcriptional regulator
FOC89_06855	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOC89_06880	COG1547	Domain of unknown function (DUF309)
FOC89_06885	COG0456	acetyltransferase
FOC89_06890	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOC89_06895	COG4086	secreted protein
FOC89_06900	COG0561	phosphatase activity
FOC89_06905	COG0697	spore germination
FOC89_06920	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC89_06945	COG0733	neurotransmitter:sodium symporter activity
FOC89_06965	COG1686	Belongs to the peptidase S11 family
FOC89_06970	COG1725	Transcriptional regulator
FOC89_06975	COG1131	(ABC) transporter
FOC89_06995	COG1846	Transcriptional regulator
FOC89_07010	COG0598	Magnesium transport protein CorA
FOC89_07035	COG4974	Belongs to the 'phage' integrase family
FOC89_07045	COG0735	belongs to the Fur family
FOC89_07050	COG1300	Membrane
FOC89_07070	COG0667	Aldo Keto reductase
FOC89_07075	COG0656	L-ascorbic acid biosynthetic process
FOC89_07080	COG0456	acetyltransferase
FOC89_07080	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC89_07090	COG0737	Belongs to the 5'-nucleotidase family
FOC89_07090	COG1525	nuclease
FOC89_07090	COG4085	toxin activity
FOC89_07100	COG0596	Alpha beta hydrolase
FOC89_07105	COG2056	Na+-H+ antiporter family
FOC89_07110	COG1609	Transcriptional regulator
FOC89_07115	COG0456	acetyltransferase
FOC89_07120	COG1073	alpha beta
FOC89_07135	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC89_07135	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC89_07140	COG0307	riboflavin synthase, alpha
FOC89_07165	COG4106	trans-aconitate 2-methyltransferase activity
FOC89_07170	COG2226	methyltransferase
FOC89_07170	COG1073	alpha beta
FOC89_07185	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC89_07200	COG0737	Belongs to the 5'-nucleotidase family
FOC89_07210	COG1522	sequence-specific DNA binding
FOC89_07230	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC89_07240	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FOC89_07255	COG0300	oxidoreductase activity
FOC89_07260	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_07265	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC89_07270	COG1760	l-serine dehydratase
FOC89_07275	COG1760	l-serine dehydratase
FOC89_07295	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC89_07305	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC89_07310	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC89_07325	COG1376	ErfK ybiS ycfS ynhG family protein
FOC89_07330	COG4129	membrane
FOC89_07335	COG1126	abc transporter atp-binding protein
FOC89_07340	COG0765	amino acid transport
FOC89_07345	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC89_07360	COG2816	NAD+ diphosphatase activity
FOC89_07365	COG0772	Belongs to the SEDS family
FOC89_07370	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC89_07375	COG0022	dehydrogenase e1 component
FOC89_07380	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC89_07385	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC89_07400	COG0280	phosphate acetyltransferase
FOC89_07405	COG3290	protein histidine kinase activity
FOC89_07405	COG3829	transcription factor binding
FOC89_07415	COG0584	glycerophosphoryl diester phosphodiesterase
FOC89_07420	COG3093	addiction module antidote protein HigA
FOC89_07430	COG0745	RESPONSE REGULATOR receiver
FOC89_07435	COG0750	zinc metalloprotease
FOC89_07440	COG0497	DNA recombination
FOC89_07450	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FOC89_07460	COG0142	geranyltranstransferase activity
FOC89_07485	COG1302	Protein conserved in bacteria
FOC89_07490	COG0439	Biotin carboxylase
FOC89_07495	COG0511	ligase activity, forming carbon-carbon bonds
FOC89_07540	COG3854	ATPases associated with a variety of cellular activities
FOC89_07565	COG0006	proline dipeptidase activity
FOC89_07580	COG3872	metal-dependent enzyme
FOC89_07590	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC89_07610	COG0095	Lipoate-protein ligase
FOC89_07615	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC89_07620	COG1609	Transcriptional regulator
FOC89_07630	COG2076	Multidrug Resistance protein
FOC89_07635	COG2076	Multidrug Resistance protein
FOC89_07670	COG1131	(ABC) transporter
FOC89_07675	COG1725	Transcriptional regulator
FOC89_07705	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC89_07760	COG4970	Tfp pilus assembly protein FimT
FOC89_07770	COG1459	type II secretion system
FOC89_07775	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOC89_07825	COG0646	methionine synthase
FOC89_07825	COG1410	methionine synthase
FOC89_07830	COG0646	methionine synthase
FOC89_07830	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FOC89_07835	COG0626	cystathionine gamma-synthase activity
FOC89_07840	COG0626	cystathionine gamma-synthase activity
FOC89_07860	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_07870	COG1940	carbohydrate kinase activity
FOC89_07875	COG4483	Protein conserved in bacteria
FOC89_07880	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOC89_07885	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOC89_07890	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FOC89_07895	COG0704	Plays a role in the regulation of phosphate uptake
FOC89_07905	COG0581	inorganic phosphate transmembrane transporter activity
FOC89_07910	COG0573	inorganic phosphate transmembrane transporter activity
FOC89_07915	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC89_07925	COG0477	Major facilitator Superfamily
FOC89_07930	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC89_07955	COG0735	belongs to the Fur family
FOC89_07960	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOC89_07965	COG1121	(ABC) transporter
FOC89_07970	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_08000	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC89_08005	COG2384	SAM-dependent methyltransferase
FOC89_08010	COG2010	Cytochrome c
FOC89_08015	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOC89_08020	COG0358	DNA primase activity
FOC89_08035	COG0517	IMP dehydrogenase activity
FOC89_08050	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOC89_08055	COG0295	cytidine deaminase activity
FOC89_08060	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOC89_08070	COG1480	7TM receptor with intracellular HD hydrolase
FOC89_08075	COG1702	phosphate starvation-inducible protein PhoH
FOC89_08090	COG1610	YqeY-like protein
FOC89_08095	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOC89_08100	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC89_08105	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOC89_08135	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC89_08140	COG1733	regulation of RNA biosynthetic process
FOC89_08165	COG1466	dna polymerase III delta subunit
FOC89_08175	COG2333	competence protein COMEC
FOC89_08175	COG0658	competence protein
FOC89_08180	COG2131	deaminase
FOC89_08185	COG1596	polysaccharide export
FOC89_08185	COG1555	photosystem II stabilization
FOC89_08190	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC89_08195	COG2226	methyltransferase
FOC89_08200	COG0799	negative regulation of ribosome biogenesis
FOC89_08205	COG1713	HD superfamily hydrolase involved in NAD metabolism
FOC89_08215	COG1534	Rna-binding protein
FOC89_08225	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FOC89_08230	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
FOC89_08255	COG1595	DNA-templated transcription, initiation
FOC89_08265	COG0778	Nitroreductase
FOC89_08270	COG2357	RelA SpoT domain protein
FOC89_08280	COG1785	Belongs to the alkaline phosphatase family
FOC89_08290	COG2267	carboxylic ester hydrolase activity
FOC89_08325	COG1404	Belongs to the peptidase S8 family
FOC89_08330	COG3186	Phenylalanine-4-hydroxylase
FOC89_08340	COG2514	catechol 2,3-dioxygenase activity
FOC89_08345	COG2259	Doxx family
FOC89_08385	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC89_08395	COG1454	alcohol dehydrogenase
FOC89_08395	COG1012	belongs to the aldehyde dehydrogenase family
FOC89_08400	COG0626	cystathionine gamma-synthase activity
FOC89_08405	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC89_08430	COG0768	penicillin binding
FOC89_08455	COG4122	O-methyltransferase activity
FOC89_08460	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOC89_08490	COG0628	permease
FOC89_08510	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOC89_08525	COG1104	cysteine desulfurase activity
FOC89_08530	COG1959	2 iron, 2 sulfur cluster binding
FOC89_08535	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOC89_08545	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOC89_08575	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC89_08585	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOC89_08585	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
FOC89_08590	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC89_08595	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC89_08595	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC89_08605	COG2244	polysaccharide biosynthetic process
FOC89_08610	COG2323	membrane
FOC89_08620	COG1862	Preprotein translocase
FOC89_08650	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FOC89_08680	COG0157	Belongs to the NadC ModD family
FOC89_08685	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOC89_08690	COG1104	cysteine desulfurase activity
FOC89_08695	COG1827	regulation of RNA biosynthetic process
FOC89_08700	COG2258	MOSC domain
FOC89_08705	COG0077	Prephenate dehydratase
FOC89_08710	COG0577	efflux transmembrane transporter activity
FOC89_08715	COG0577	efflux transmembrane transporter activity
FOC89_08720	COG1136	(ABC) transporter
FOC89_08725	COG5002	protein histidine kinase activity
FOC89_08730	COG0745	RESPONSE REGULATOR receiver
FOC89_08740	COG3290	protein histidine kinase activity
FOC89_08750	COG2868	ribosomal protein
FOC89_08760	COG1530	ribonuclease E activity
FOC89_08765	COG1994	Peptidase M50
FOC89_08770	COG0739	heme binding
FOC89_08775	COG2894	cell division
FOC89_08795	COG1077	Cell shape determining protein MreB Mrl
FOC89_08815	COG0285	dihydrofolate synthase activity
FOC89_08820	COG0525	valine-tRNA ligase activity
FOC89_08830	COG1388	LysM domain
FOC89_08840	COG0113	porphobilinogen synthase activity
FOC89_08845	COG1587	Uroporphyrinogen-III synthase
FOC89_08855	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC89_08865	COG1846	Transcriptional regulator
FOC89_08870	COG1764	response to oxidative stress
FOC89_08885	COG0470	DNA polymerase III
FOC89_08885	COG1067	ATP-dependent peptidase activity
FOC89_08935	COG0622	Phosphoesterase
FOC89_08950	COG5401	PFAM Sporulation and spore germination
FOC89_08970	COG1309	transcriptional regulator
FOC89_08985	COG2197	response regulator
FOC89_08990	COG2233	PERMEase
FOC89_09000	COG0402	S-adenosylhomocysteine deaminase activity
FOC89_09005	COG0402	S-adenosylhomocysteine deaminase activity
FOC89_09025	COG0444	Belongs to the ABC transporter superfamily
FOC89_09030	COG4608	Belongs to the ABC transporter superfamily
FOC89_09035	COG3275	phosphorelay sensor kinase activity
FOC89_09040	COG3279	Response regulator of the LytR AlgR family
FOC89_09050	COG1983	PspC domain protein
FOC89_09055	COG1396	sequence-specific DNA binding
FOC89_09060	COG0697	spore germination
FOC89_09070	COG1959	2 iron, 2 sulfur cluster binding
FOC89_09075	COG1668	transmembrane transport
FOC89_09080	COG4152	abc transporter atp-binding protein
FOC89_09085	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
FOC89_09090	COG1360	Flagellar Motor Protein
FOC89_09095	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC89_09100	COG1876	peptidase activity
FOC89_09105	COG0824	Thioesterase
FOC89_09110	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOC89_09115	COG1053	succinate dehydrogenase
FOC89_09120	COG2009	succinate dehydrogenase
FOC89_09125	COG1719	4-vinyl reductase, 4VR
FOC89_09135	COG3118	belongs to the thioredoxin family
FOC89_09140	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FOC89_09145	COG2086	electron transfer activity
FOC89_09150	COG1024	Enoyl-CoA hydratase
FOC89_09155	COG1309	transcriptional regulator
FOC89_09160	COG0318	PFAM AMP-dependent synthetase and ligase
FOC89_09180	COG2318	DinB family
FOC89_09205	COG1131	(ABC) transporter
FOC89_09210	COG2205	protein histidine kinase activity
FOC89_09215	COG0745	RESPONSE REGULATOR receiver
FOC89_09225	COG4895	conserved protein (DUF2196)
FOC89_09230	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOC89_09245	COG4509	Sortase family
FOC89_09250	COG1120	ATPase activity
FOC89_09265	COG5386	Cell surface protein
FOC89_09275	COG5386	Cell surface protein
FOC89_09280	COG1114	Component of the transport system for branched-chain amino acids
FOC89_09285	COG1187	pseudouridine synthase activity
FOC89_09295	COG1796	DNA polymerase
FOC89_09295	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC89_09300	COG1286	toxin biosynthetic process
FOC89_09345	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC89_09355	COG1418	mRNA catabolic process
FOC89_09380	COG2814	Major facilitator Superfamily
FOC89_09385	COG1566	PFAM secretion protein HlyD family protein
FOC89_09390	COG1309	transcriptional regulator
FOC89_09395	COG1363	Peptidase, m42
FOC89_09420	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC89_09430	COG1484	DNA-dependent DNA replication
FOC89_09435	COG3611	Membrane attachment protein
FOC89_09445	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC89_09450	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC89_09455	COG0237	dephospho-CoA kinase activity
FOC89_09460	COG1971	Probably functions as a manganese efflux pump
FOC89_09470	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC89_09470	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC89_09475	COG5002	protein histidine kinase activity
FOC89_09480	COG0745	RESPONSE REGULATOR receiver
FOC89_09500	COG0538	isocitrate dehydrogenase activity
FOC89_09505	COG0372	Belongs to the citrate synthase family
FOC89_09515	COG0628	permease
FOC89_09520	COG3030	protein affecting phage T7 exclusion by the F plasmid
FOC89_09545	COG1725	Transcriptional regulator
FOC89_09550	COG0281	malic enzyme
FOC89_09555	COG0587	DNA-directed DNA polymerase activity
FOC89_09570	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FOC89_09590	COG4109	DRTGG domain
FOC89_09605	COG0006	proline dipeptidase activity
FOC89_09655	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC89_09660	COG0662	Cupin 2, conserved barrel domain protein
FOC89_09670	COG1476	TRANSCRIPTIONal
FOC89_09685	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_09690	COG0589	response to stress
FOC89_09730	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_09755	COG0827	DNA restriction-modification system
FOC89_09760	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FOC89_09765	COG3874	Sporulation protein YtfJ
FOC89_09780	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FOC89_09790	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC89_09805	COG1104	cysteine desulfurase activity
FOC89_09815	COG0583	DNA-binding transcription factor activity
FOC89_09820	COG0697	spore germination
FOC89_09825	COG1309	transcriptional regulator
FOC89_09830	COG1956	GAF domain-containing protein
FOC89_09835	COG0626	cystathionine gamma-synthase activity
FOC89_09865	COG1595	DNA-templated transcription, initiation
FOC89_09875	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC89_09880	COG0454	-acetyltransferase
FOC89_09885	COG0517	IMP dehydrogenase activity
FOC89_09890	COG0123	including yeast histone deacetylase and acetoin utilization protein
FOC89_09895	COG2267	carboxylic ester hydrolase activity
FOC89_09905	COG0745	RESPONSE REGULATOR receiver
FOC89_09915	COG0666	response to abiotic stimulus
FOC89_09950	COG1609	Transcriptional regulator
FOC89_09955	COG4851	CamS sex pheromone cAM373 precursor
FOC89_09960	COG3118	belongs to the thioredoxin family
FOC89_09970	COG2309	aminopeptidase activity
FOC89_09995	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC89_10000	COG0697	spore germination
FOC89_10005	COG0789	Transcriptional regulator
FOC89_10020	COG1674	ftsk spoiiie
FOC89_10030	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC89_10040	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC89_10045	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FOC89_10050	COG1363	Peptidase, m42
FOC89_10060	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_10075	COG0510	thiamine kinase activity
FOC89_10080	COG1523	belongs to the glycosyl hydrolase 13 family
FOC89_10090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC89_10095	COG1349	DNA-binding transcription factor activity
FOC89_10100	COG1187	pseudouridine synthase activity
FOC89_10105	COG2244	polysaccharide biosynthetic process
FOC89_10110	COG2081	HI0933 family
FOC89_10115	COG2814	Major facilitator Superfamily
FOC89_10125	COG3832	glyoxalase III activity
FOC89_10145	COG1329	Transcriptional regulator
FOC89_10170	COG0314	molybdopterin synthase activity
FOC89_10175	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOC89_10180	COG0303	'Molybdopterin
FOC89_10190	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC89_10195	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC89_10215	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC89_10225	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC89_10265	COG2814	Major facilitator Superfamily
FOC89_10270	COG0475	glutathione-regulated potassium exporter activity
FOC89_10275	COG0490	domain, Protein
FOC89_10280	COG0582	viral genome integration into host DNA
FOC89_10290	COG1136	(ABC) transporter
FOC89_10310	COG1242	4 iron, 4 sulfur cluster binding
FOC89_10315	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FOC89_10320	COG1131	(ABC) transporter
FOC89_10330	COG1794	racemase activity, acting on amino acids and derivatives
FOC89_10350	COG2267	carboxylic ester hydrolase activity
FOC89_10355	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOC89_10360	COG0671	phosphoesterase, PA-phosphatase related
FOC89_10365	COG0438	transferase activity, transferring glycosyl groups
FOC89_10375	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC89_10430	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC89_10435	COG5002	protein histidine kinase activity
FOC89_10440	COG4191	Histidine kinase
FOC89_10445	COG2267	carboxylic ester hydrolase activity
FOC89_10450	COG1368	sulfuric ester hydrolase activity
FOC89_10465	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC89_10470	COG1116	anion transmembrane transporter activity
FOC89_10475	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC89_10490	COG0546	phosphoglycolate phosphatase activity
FOC89_10500	COG0494	nUDIX hydrolase
FOC89_10535	COG0288	reversible hydration of carbon dioxide
FOC89_10540	COG1271	oxidase subunit
FOC89_10545	COG1294	oxidase, subunit
FOC89_10565	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_10590	COG1842	Phage shock protein A
FOC89_10620	COG5002	protein histidine kinase activity
FOC89_10625	COG0745	RESPONSE REGULATOR receiver
FOC89_10655	COG1597	lipid kinase activity
FOC89_10680	COG0586	Pfam SNARE associated Golgi protein
FOC89_10690	COG0577	efflux transmembrane transporter activity
FOC89_10695	COG1136	(ABC) transporter
FOC89_10700	COG3708	Transcriptional regulator
FOC89_10700	COG2207	Transcriptional regulator
FOC89_10705	COG0745	RESPONSE REGULATOR receiver
FOC89_10710	COG2205	protein histidine kinase activity
FOC89_10715	COG0577	efflux transmembrane transporter activity
FOC89_10720	COG0577	efflux transmembrane transporter activity
FOC89_10725	COG1136	(ABC) transporter
FOC89_10730	COG0577	efflux transmembrane transporter activity
FOC89_10745	COG2188	Transcriptional regulator
FOC89_10765	COG3964	amidohydrolase
FOC89_10795	COG4948	Mandelate Racemase Muconate Lactonizing
FOC89_10805	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC89_10810	COG0596	Alpha beta hydrolase
FOC89_10815	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FOC89_10820	COG1169	isochorismate synthase
FOC89_10825	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC89_10830	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOC89_10850	COG0058	SHG alpha-glucan phosphorylase activity
FOC89_10860	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOC89_10895	COG1595	DNA-templated transcription, initiation
FOC89_10990	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOC89_11025	COG1285	pathogenesis
FOC89_11030	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC89_11045	COG2155	Conserved Protein
FOC89_11050	COG1098	S1 RNA binding domain
FOC89_11055	COG0436	Aminotransferase
FOC89_11060	COG1522	sequence-specific DNA binding
FOC89_11065	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC89_11070	COG2267	carboxylic ester hydrolase activity
FOC89_11080	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOC89_11100	COG5018	Exonuclease
FOC89_11105	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC89_11125	COG2050	protein possibly involved in aromatic compounds catabolism
FOC89_11135	COG1268	BioY protein
FOC89_11145	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC89_11150	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOC89_11165	COG3584	3D domain protein
FOC89_11180	COG1252	NADH dehydrogenase
FOC89_11195	COG3708	Transcriptional regulator
FOC89_11210	COG1683	Conserved Protein
FOC89_11225	COG0316	Belongs to the HesB IscA family
FOC89_11240	COG1252	NADH dehydrogenase
FOC89_11250	COG2274	protein secretion by the type I secretion system
FOC89_11255	COG0390	transport system, permease component
FOC89_11260	COG2824	Alkylphosphonate utilization operon protein PhnA
FOC89_11280	COG4837	Protein of unknown function (DUF1462)
FOC89_11285	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FOC89_11295	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC89_11300	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FOC89_11310	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC89_11320	COG0647	UMP catabolic process
FOC89_11330	COG2445	Protein of unknown function DUF86
FOC89_11335	COG1494	fructose-1,6-bisphosphatase
FOC89_11350	COG4470	Protein conserved in bacteria
FOC89_11360	COG0789	Transcriptional regulator
FOC89_11365	COG4377	Putative membrane peptidase family (DUF2324)
FOC89_11390	COG0739	heme binding
FOC89_11400	COG3377	Domain of unknown function (DUF1805)
FOC89_11405	COG0737	Belongs to the 5'-nucleotidase family
FOC89_11410	COG0719	Fe-S assembly protein
FOC89_11415	COG0822	iron-sulfur transferase activity
FOC89_11420	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC89_11425	COG0719	Fe-S assembly protein
FOC89_11430	COG0396	ATPase activity
FOC89_11435	COG1464	Belongs to the NlpA lipoprotein family
FOC89_11440	COG1464	Belongs to the NlpA lipoprotein family
FOC89_11445	COG2011	ABC-type metal ion transport system permease component
FOC89_11460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC89_11465	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOC89_11475	COG1393	Belongs to the ArsC family
FOC89_11555	COG1396	sequence-specific DNA binding
FOC89_11560	COG1309	transcriptional regulator
FOC89_11565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_11570	COG1960	acyl-CoA dehydrogenase activity
FOC89_11575	COG0183	Belongs to the thiolase family
FOC89_11580	COG1024	Enoyl-CoA hydratase
FOC89_11580	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC89_11590	COG1686	Belongs to the peptidase S11 family
FOC89_11605	COG0011	TIGRFAM Protein of
FOC89_11610	COG0840	transmembrane signaling receptor activity
FOC89_11630	COG2814	Major facilitator Superfamily
FOC89_11635	COG0531	amino acid
FOC89_11645	COG0706	membrane insertase activity
FOC89_11655	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_11690	COG0586	Pfam SNARE associated Golgi protein
FOC89_11700	COG1376	ErfK ybiS ycfS ynhG family protein
FOC89_11705	COG0745	RESPONSE REGULATOR receiver
FOC89_11710	COG5002	protein histidine kinase activity
FOC89_11735	COG0840	transmembrane signaling receptor activity
FOC89_11740	COG2151	metal-sulfur cluster biosynthetic enzyme
FOC89_11745	COG3227	Zinc metalloprotease (Elastase)
FOC89_11750	COG1741	Belongs to the pirin family
FOC89_11765	COG0475	glutathione-regulated potassium exporter activity
FOC89_11770	COG0490	domain, Protein
FOC89_11775	COG1115	amino acid carrier protein
FOC89_11780	COG0783	Belongs to the Dps family
FOC89_11795	COG1611	Belongs to the LOG family
FOC89_11815	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC89_11820	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC89_11825	COG1115	amino acid carrier protein
FOC89_11830	COG2910	NAD(P)H-binding
FOC89_11850	COG0656	L-ascorbic acid biosynthetic process
FOC89_11855	COG2814	Major facilitator Superfamily
FOC89_11860	COG1733	regulation of RNA biosynthetic process
FOC89_11870	COG1252	NADH dehydrogenase
FOC89_11875	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOC89_11880	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOC89_11905	COG3290	protein histidine kinase activity
FOC89_11905	COG0840	transmembrane signaling receptor activity
FOC89_11935	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC89_12035	COG0557	exoribonuclease II activity
FOC89_12040	COG1647	Serine aminopeptidase, S33
FOC89_12045	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC89_12050	COG1346	cytolysis
FOC89_12085	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC89_12100	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC89_12125	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC89_12140	COG2323	membrane
FOC89_12150	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC89_12160	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FOC89_12170	COG1051	belongs to the nudix hydrolase family
FOC89_12180	COG0492	ferredoxin-NADP+ reductase activity
FOC89_12185	COG0457	Tetratricopeptide repeat
FOC89_12190	COG0110	maltose O-acetyltransferase activity
FOC89_12210	COG1950	PFAM Membrane protein of
FOC89_12220	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC89_12225	COG0556	nucleotide-excision repair
FOC89_12240	COG0789	Transcriptional regulator
FOC89_12265	COG2855	membrane
FOC89_12270	COG0583	DNA-binding transcription factor activity
FOC89_12280	COG0655	NAD(P)H dehydrogenase (quinone) activity
FOC89_12295	COG1132	(ABC) transporter
FOC89_12300	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC89_12305	COG3409	Peptidoglycan-binding domain 1 protein
FOC89_12305	COG0793	Belongs to the peptidase S41A family
FOC89_12310	COG2177	Part of the ABC transporter FtsEX involved in
FOC89_12315	COG2884	Cell division ATP-binding protein ftsE
FOC89_12335	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOC89_12340	COG1278	Cold shock
FOC89_12345	COG1040	competence protein
FOC89_12350	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
FOC89_12355	COG1388	LysM domain
FOC89_12355	COG0791	NLP P60 protein
FOC89_12360	COG1733	regulation of RNA biosynthetic process
FOC89_12365	COG1307	EDD domain protein, DegV family
FOC89_12370	COG1739	Uncharacterized protein family UPF0029
FOC89_12375	COG1316	TRANSCRIPTIONal
FOC89_12380	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC89_12385	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FOC89_12390	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC89_12400	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOC89_12400	COG3933	PFAM sigma-54 factor interaction domain-containing protein
FOC89_12420	COG1486	melibiose metabolic process
FOC89_12425	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC89_12430	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC89_12440	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC89_12450	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC89_12460	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC89_12465	COG1301	dicarboxylic acid transport
FOC89_12475	COG0346	lactoylglutathione lyase activity
FOC89_12480	COG1511	domain protein
FOC89_12485	COG0583	DNA-binding transcription factor activity
FOC89_12490	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FOC89_12500	COG1271	oxidase subunit
FOC89_12505	COG1294	oxidase, subunit
FOC89_12510	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC89_12520	COG1620	l-lactate permease
FOC89_12530	COG2389	metal-binding protein
FOC89_12540	COG1368	sulfuric ester hydrolase activity
FOC89_12550	COG0791	NLP P60 protein
FOC89_12550	COG1388	LysM domain
FOC89_12555	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC89_12565	COG1215	transferase activity, transferring glycosyl groups
FOC89_12570	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC89_12575	COG3584	3D domain protein
FOC89_12575	COG1388	LysM domain
FOC89_12600	COG4715	Zinc finger, swim domain protein
FOC89_12605	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC89_12650	COG0577	efflux transmembrane transporter activity
FOC89_12655	COG1136	(ABC) transporter
FOC89_12690	COG5002	protein histidine kinase activity
FOC89_12695	COG0745	RESPONSE REGULATOR receiver
FOC89_12700	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC89_12710	COG1316	TRANSCRIPTIONal
FOC89_12715	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC89_12720	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FOC89_12725	COG1215	transferase activity, transferring glycosyl groups
FOC89_12750	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC89_12755	COG4464	protein tyrosine phosphatase activity
FOC89_12760	COG0489	protein tyrosine kinase activity
FOC89_12765	COG3944	biosynthesis protein
FOC89_12770	COG0489	protein tyrosine kinase activity
FOC89_12785	COG1609	Transcriptional regulator
FOC89_12795	COG0739	heme binding
FOC89_12810	COG3279	Response regulator of the LytR AlgR family
FOC89_12815	COG2385	sporulation resulting in formation of a cellular spore
FOC89_12830	COG4836	Membrane
FOC89_12835	COG1007	ATP synthesis coupled electron transport
FOC89_12840	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC89_12845	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC89_12855	COG0839	Belongs to the complex I subunit 6 family
FOC89_12870	COG0649	NAD binding
FOC89_12875	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC89_12890	COG5001	Diguanylate cyclase
FOC89_12890	COG3300	MHYT domain
FOC89_12940	COG0356	it plays a direct role in the translocation of protons across the membrane
FOC89_12975	COG0698	ribose 5-phosphate isomerase
FOC89_12985	COG2190	(PTS) system
FOC89_12990	COG2259	Doxx family
FOC89_12995	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC89_13010	COG0009	L-threonylcarbamoyladenylate synthase
FOC89_13025	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC89_13045	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOC89_13050	COG1494	fructose-1,6-bisphosphatase
FOC89_13070	COG4821	SIS domain
FOC89_13090	COG1960	acyl-CoA dehydrogenase activity
FOC89_13095	COG1960	acyl-CoA dehydrogenase activity
FOC89_13100	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC89_13105	COG0183	Belongs to the thiolase family
FOC89_13110	COG0247	lactate metabolic process
FOC89_13110	COG2181	nitrate reductase activity
FOC89_13115	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC89_13125	COG5001	Diguanylate cyclase
FOC89_13125	COG3300	MHYT domain
FOC89_13155	COG0024	Methionine aminopeptidase
FOC89_13165	COG2234	aminopeptidase activity
FOC89_13185	COG1595	DNA-templated transcription, initiation
FOC89_13195	COG4506	Protein conserved in bacteria
FOC89_13200	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC89_13215	COG0010	Belongs to the arginase family
FOC89_13225	COG2814	Major facilitator Superfamily
FOC89_13230	COG0789	Transcriptional regulator
FOC89_13235	COG0584	glycerophosphoryl diester phosphodiesterase
FOC89_13240	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC89_13250	COG1994	Peptidase M50
FOC89_13260	COG1078	dGTPase activity
FOC89_13265	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC89_13270	COG1120	ATPase activity
FOC89_13275	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_13280	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_13300	COG0095	Lipoate-protein ligase
FOC89_13305	COG0280	phosphate acetyltransferase
FOC89_13320	COG3773	Cell wall hydrolase
FOC89_13330	COG2363	Small membrane protein
FOC89_13340	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC89_13345	COG2233	PERMEase
FOC89_13350	COG0561	phosphatase activity
FOC89_13355	COG2814	Major facilitator Superfamily
FOC89_13365	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC89_13370	COG1131	(ABC) transporter
FOC89_13375	COG2755	lipolytic protein G-D-S-L family
FOC89_13380	COG1609	Transcriptional regulator
FOC89_13390	COG0460	homoserine dehydrogenase
FOC89_13400	COG2873	o-acetylhomoserine
FOC89_13410	COG1011	Hydrolase
FOC89_13415	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC89_13425	COG2197	response regulator
FOC89_13430	COG4585	Histidine kinase
FOC89_13430	COG2203	Gaf domain
FOC89_13435	COG0351	phosphomethylpyrimidine kinase
FOC89_13440	COG3706	GGDEF domain
FOC89_13445	COG2879	small protein
FOC89_13450	COG1966	Carbon starvation protein
FOC89_13455	COG3279	Response regulator of the LytR AlgR family
FOC89_13460	COG0477	Major facilitator Superfamily
FOC89_13485	COG0840	transmembrane signaling receptor activity
FOC89_13495	COG1607	acyl-coa hydrolase
FOC89_13510	COG0488	(ABC) transporter
FOC89_13530	COG0463	Glycosyl transferase, family 2
FOC89_13535	COG1309	transcriptional regulator
FOC89_13540	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC89_13545	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC89_13545	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC89_13550	COG0628	permease
FOC89_13565	COG3279	Response regulator of the LytR AlgR family
FOC89_13570	COG3275	phosphorelay sensor kinase activity
FOC89_13575	COG2814	Major facilitator Superfamily
FOC89_13580	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC89_13585	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
FOC89_13590	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC89_13610	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC89_13615	COG1272	protein, Hemolysin III
FOC89_13640	COG1164	Oligoendopeptidase f
FOC89_13660	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC89_13665	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FOC89_13670	COG4853	Protein conserved in bacteria
FOC89_13675	COG4863	YycH protein
FOC89_13680	COG5002	protein histidine kinase activity
FOC89_13685	COG0745	RESPONSE REGULATOR receiver
FOC89_13715	COG0305	Participates in initiation and elongation during chromosome replication
FOC89_13725	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
FOC89_13730	COG4241	membrane
FOC89_13740	COG0629	single-stranded DNA binding
FOC89_13750	COG0012	GTP binding
FOC89_13755	COG4481	Protein conserved in bacteria
FOC89_13760	COG0668	transmembrane transport
FOC89_13770	COG1475	DNA binding
FOC89_13775	COG1192	Involved in chromosome partitioning
FOC89_13800	COG1847	R3H domain protein
FOC89_13805	COG0706	membrane insertase activity
FOC89_13815	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FOC89_13825	COG0592	DNA-directed DNA polymerase activity
FOC89_13830	COG2501	S4 domain
FOC89_13840	COG0187	DNA topoisomerase II activity
FOC89_13845	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC89_13880	COG0517	IMP dehydrogenase activity
FOC89_13880	COG0516	GMP reductase activity
FOC89_13885	COG1686	Belongs to the peptidase S11 family
FOC89_13915	COG1428	Deoxynucleoside kinase
FOC89_13920	COG1428	Deoxynucleoside kinase
FOC89_13925	COG1335	isochorismatase
FOC89_13930	COG0590	tRNA wobble adenosine to inosine editing
FOC89_13940	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC89_13995	COG1982	Orn Lys Arg decarboxylase major
FOC89_14005	COG0470	DNA polymerase III
FOC89_14010	COG1774	PSP1 C-terminal conserved region
FOC89_14020	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FOC89_14030	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FOC89_14035	COG2002	toxin-antitoxin pair type II binding
FOC89_14040	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC89_14040	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC89_14045	COG0084	hydrolase, TatD family'
FOC89_14050	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOC89_14065	COG4466	Protein conserved in bacteria
FOC89_14080	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOC89_14085	COG0251	oxidation-reduction process
FOC89_14115	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOC89_14120	COG2002	toxin-antitoxin pair type II binding
FOC89_14125	COG2244	polysaccharide biosynthetic process
FOC89_14130	COG3956	TIGRFAM MazG family protein
FOC89_14135	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FOC89_14155	COG1098	S1 RNA binding domain
FOC89_14170	COG2208	phosphoserine phosphatase activity
FOC89_14185	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC89_14200	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC89_14205	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FOC89_14210	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC89_14215	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC89_14220	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FOC89_14225	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOC89_14230	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FOC89_14235	COG1396	sequence-specific DNA binding
FOC89_14240	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC89_14330	COG3880	PFAM UvrB UvrC protein
FOC89_14340	COG0542	response to heat
FOC89_14345	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FOC89_14355	COG4956	integral membrane protein (PIN domain superfamily)
FOC89_14375	COG1045	serine acetyltransferase
FOC89_14390	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC89_14395	COG3688	RNA-binding protein containing a PIN domain
FOC89_14410	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC89_14415	COG0250	Participates in transcription elongation, termination and antitermination
FOC89_14420	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FOC89_14440	COG2813	Specifically methylates the guanine in position
FOC89_14455	COG1358	cellular component organization or biogenesis
FOC89_14525	COG0255	Belongs to the universal ribosomal protein uL29 family
FOC89_14585	COG0201	protein transport
FOC89_14595	COG0024	Methionine aminopeptidase
FOC89_14605	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOC89_14640	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC89_14665	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC89_14670	COG0489	protein tyrosine kinase activity
FOC89_14680	COG2194	sulfuric ester hydrolase activity
FOC89_14685	COG0726	polysaccharide deacetylase
FOC89_14765	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
FOC89_14770	COG4856	YbbR-like protein
FOC89_14785	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FOC89_14790	COG0596	Alpha beta hydrolase
FOC89_14810	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FOC89_14815	COG1506	peptidase
FOC89_14815	COG0823	Involved in the tonB-independent uptake of proteins
FOC89_14815	COG4946	Tricorn protease homolog
FOC89_14855	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_14860	COG2011	ABC-type metal ion transport system permease component
FOC89_14865	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC89_14870	COG1464	Belongs to the NlpA lipoprotein family
FOC89_14875	COG0604	alcohol dehydrogenase
FOC89_14885	COG0277	FAD linked oxidase domain protein
FOC89_14890	COG2271	Major facilitator Superfamily
FOC89_14900	COG2814	Major facilitator Superfamily
FOC89_14915	COG0601	transmembrane transport
FOC89_14920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC89_14925	COG0444	Belongs to the ABC transporter superfamily
FOC89_14930	COG4608	Belongs to the ABC transporter superfamily
FOC89_14935	COG4166	transmembrane transport
FOC89_14945	COG2207	Transcriptional regulator
FOC89_14955	COG1309	transcriptional regulator
FOC89_14965	COG4166	transmembrane transport
FOC89_14970	COG4166	transmembrane transport
FOC89_14975	COG0656	L-ascorbic acid biosynthetic process
FOC89_14980	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC89_14995	COG4149	molybdate abc transporter
FOC89_15000	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOC89_15005	COG1910	domain protein
FOC89_15020	COG0697	spore germination
FOC89_15035	COG0204	Acyl-transferase
FOC89_15045	COG1609	Transcriptional regulator
FOC89_15055	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_15065	COG0084	hydrolase, TatD family'
FOC89_15070	COG5298	Protein conserved in bacteria
FOC89_15095	COG0488	(ABC) transporter
FOC89_15100	COG4585	Histidine kinase
FOC89_15105	COG2197	response regulator
FOC89_15110	COG1131	(ABC) transporter
FOC89_15115	COG0842	Transport permease protein
FOC89_15115	COG1511	domain protein
FOC89_15120	COG0842	Transport permease protein
FOC89_15130	COG0747	negative chemotaxis
FOC89_15135	COG0601	transmembrane transport
FOC89_15140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC89_15145	COG0444	Belongs to the ABC transporter superfamily
FOC89_15150	COG4608	Belongs to the ABC transporter superfamily
FOC89_15155	COG0561	phosphatase activity
FOC89_15180	COG3185	4-Hydroxyphenylpyruvate dioxygenase
FOC89_15185	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC89_15205	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOC89_15215	COG4294	response to UV
FOC89_15220	COG0705	Rhomboid family
FOC89_15220	COG0457	Tetratricopeptide repeat
FOC89_15230	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOC89_15235	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC89_15240	COG0864	Transcriptional regulator
FOC89_15245	COG2337	Toxic component of a toxin-antitoxin (TA) module
FOC89_15250	COG2183	response to ionizing radiation
FOC89_15345	COG0802	atpase or kinase
FOC89_15350	COG1214	PFAM Peptidase M22, glycoprotease
FOC89_15355	COG0456	acetyltransferase
FOC89_15365	COG0488	(ABC) transporter
FOC89_15380	COG1266	CAAX protease self-immunity
FOC89_15400	COG2252	PERMEase
FOC89_15410	COG5002	protein histidine kinase activity
FOC89_15435	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FOC89_15465	COG2226	methyltransferase
FOC89_15485	COG1215	transferase activity, transferring glycosyl groups
FOC89_15525	COG2205	protein histidine kinase activity
FOC89_15530	COG0745	RESPONSE REGULATOR receiver
FOC89_15550	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOC89_15555	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOC89_15560	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOC89_15570	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOC89_15585	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FOC89_15595	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOC89_15605	COG0151	Belongs to the GarS family
FOC89_15630	COG0210	DNA helicase
FOC89_15640	COG4851	CamS sex pheromone cAM373 precursor
FOC89_15660	COG1335	isochorismatase
FOC89_15665	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC89_15670	COG2011	ABC-type metal ion transport system permease component
FOC89_15675	COG1464	Belongs to the NlpA lipoprotein family
FOC89_15690	COG0003	Pfam Anion-transporting ATPase
FOC89_15695	COG1846	Transcriptional regulator
FOC89_15700	COG4682	membrane
FOC89_15720	COG1597	lipid kinase activity
FOC89_15725	COG0546	phosphoglycolate phosphatase activity
FOC89_15730	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC89_15740	COG1012	belongs to the aldehyde dehydrogenase family
FOC89_15745	COG2076	Multidrug Resistance protein
FOC89_15750	COG2309	aminopeptidase activity
FOC89_15765	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC89_15770	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC89_15775	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC89_15785	COG4807	Protein conserved in bacteria
FOC89_15815	COG1473	amidohydrolase
FOC89_15830	COG0450	alkyl hydroperoxide reductase
FOC89_15850	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_15855	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_15860	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC89_15875	COG0166	Belongs to the GPI family
FOC89_15900	COG5002	protein histidine kinase activity
FOC89_15920	COG3541	Predicted nucleotidyltransferase
FOC89_15930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC89_15930	COG0723	plastoquinol--plastocyanin reductase activity
FOC89_15940	COG0765	amino acid transport
FOC89_15945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC89_15955	COG0840	transmembrane signaling receptor activity
FOC89_15995	COG0366	Alpha amylase catalytic
FOC89_16000	COG2190	(PTS) system
FOC89_16000	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC89_16000	COG1263	PTS System
FOC89_16030	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOC89_16045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC89_16055	COG1116	anion transmembrane transporter activity
FOC89_16060	COG0488	(ABC) transporter
FOC89_16110	COG2270	Major facilitator Superfamily
FOC89_16140	COG2310	stress, protein
FOC89_16145	COG2310	stress, protein
FOC89_16150	COG2310	stress, protein
FOC89_16155	COG0861	Integral membrane protein TerC family
FOC89_16165	COG3853	Toxic anion resistance protein (TelA)
FOC89_16180	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOC89_16190	COG1295	ribonuclease BN
FOC89_16195	COG2217	Heavy metal translocating P-type atpase
FOC89_16200	COG0697	spore germination
FOC89_16215	COG0681	Belongs to the peptidase S26 family
FOC89_16225	COG0586	Pfam SNARE associated Golgi protein
FOC89_16240	COG3871	stress protein (general stress protein 26)
FOC89_16245	COG0387	Pfam Sodium calcium exchanger
FOC89_16255	COG0535	radical SAM domain protein
FOC89_16275	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC89_16280	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC89_16295	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC89_16325	COG1263	PTS System
FOC89_16325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC89_16330	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC89_16345	COG0463	Glycosyl transferase, family 2
FOC89_16355	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC89_16355	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOC89_16375	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOC89_16395	COG1228	amidohydrolase
FOC89_16400	COG1090	epimerase
FOC89_16430	COG1988	membrane-bound metal-dependent
FOC89_16435	COG1194	a g-specific adenine glycosylase
FOC89_16460	COG1132	(ABC) transporter
FOC89_16465	COG4129	membrane
FOC89_16470	COG0070	glutamate synthase
FOC89_16470	COG0069	glutamate synthase activity
FOC89_16470	COG0067	glutamate synthase
FOC89_16480	COG4555	ABC transporter
FOC89_16500	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC89_16505	COG0735	belongs to the Fur family
FOC89_16620	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FOC89_16625	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOC89_16635	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOC89_16645	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOC89_16655	COG2766	serine protein kinase
FOC89_16675	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC89_16685	COG1585	Membrane protein implicated in regulation of membrane protease activity
FOC89_16690	COG2268	Band 7 protein
FOC89_16700	COG3290	protein histidine kinase activity
FOC89_16705	COG4565	transcriptional regulatory protein
FOC89_16710	COG2851	Citrate transporter
FOC89_16730	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC89_16735	COG3842	ATPase activity
FOC89_16740	COG1175	transmembrane transport
FOC89_16745	COG0395	ABC-type sugar transport system, permease component
FOC89_16755	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC89_16760	COG0745	RESPONSE REGULATOR receiver
FOC89_16765	COG5002	protein histidine kinase activity
FOC89_16775	COG4990	cell redox homeostasis
FOC89_16785	COG3290	protein histidine kinase activity
FOC89_16790	COG4565	transcriptional regulatory protein
FOC89_16795	COG3493	citrate carrier protein
FOC89_16800	COG0281	malic enzyme
FOC89_16815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC89_16825	COG5002	protein histidine kinase activity
FOC89_16830	COG0745	RESPONSE REGULATOR receiver
FOC89_16835	COG0456	acetyltransferase
FOC89_16835	COG0454	-acetyltransferase
FOC89_16840	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC89_16845	COG3383	formate dehydrogenase (NAD+) activity
FOC89_16850	COG2427	Protein of unknown function (DUF1641)
FOC89_16865	COG0531	amino acid
FOC89_16870	COG0640	Transcriptional regulator
FOC89_16875	COG2217	Heavy metal translocating P-type atpase
FOC89_16880	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOC89_16895	COG3227	Zinc metalloprotease (Elastase)
FOC89_16915	COG2720	vancomycin resistance protein
FOC89_16920	COG1316	TRANSCRIPTIONal
FOC89_16925	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC89_16930	COG0346	lactoylglutathione lyase activity
FOC89_16935	COG1253	flavin adenine dinucleotide binding
FOC89_16940	COG1027	Aspartate ammonia-lyase
FOC89_16945	COG1620	l-lactate permease
FOC89_16960	COG3104	oligopeptide transport
FOC89_16965	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC89_16970	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_16975	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC89_16990	COG0156	8-amino-7-oxononanoate synthase activity
FOC89_16995	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC89_17000	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FOC89_17010	COG4548	von Willebrand factor, type A
FOC89_17015	COG0714	Associated with various cellular activities
FOC89_17020	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC89_17040	COG0531	amino acid
FOC89_17045	COG2188	Transcriptional regulator
FOC89_17050	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC89_17050	COG1263	PTS System
FOC89_17055	COG0366	Alpha amylase catalytic
FOC89_17070	COG0697	spore germination
FOC89_17080	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC89_17085	COG1115	amino acid carrier protein
FOC89_17090	COG1126	abc transporter atp-binding protein
FOC89_17095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC89_17100	COG0765	amino acid transport
FOC89_17105	COG0765	amino acid transport
FOC89_17110	COG0833	amino acid
FOC89_17135	COG2378	regulation of single-species biofilm formation
FOC89_17140	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FOC89_17145	COG5002	protein histidine kinase activity
FOC89_17160	COG0659	secondary active sulfate transmembrane transporter activity
FOC89_17175	COG0747	negative chemotaxis
FOC89_17185	COG0601	transmembrane transport
FOC89_17190	COG4608	Belongs to the ABC transporter superfamily
FOC89_17200	COG2271	Major facilitator Superfamily
FOC89_17205	COG1846	Transcriptional regulator
FOC89_17210	COG0477	Major facilitator Superfamily
FOC89_17215	COG1609	Transcriptional regulator
FOC89_17220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC89_17235	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC89_17240	COG1879	ABC-type sugar transport system periplasmic component
FOC89_17260	COG1063	alcohol dehydrogenase
FOC89_17275	COG3568	Endonuclease Exonuclease Phosphatase
FOC89_17305	COG0840	transmembrane signaling receptor activity
FOC89_17310	COG1388	LysM domain
FOC89_17310	COG3584	3D domain protein
FOC89_17315	COG1476	TRANSCRIPTIONal
FOC89_17330	COG3104	oligopeptide transport
FOC89_17335	COG1114	Component of the transport system for branched-chain amino acids
FOC89_17350	COG1113	amino acid transport
FOC89_17355	COG2252	PERMEase
FOC89_17370	COG2153	protein acetylation
FOC89_17380	COG0569	domain protein
FOC89_17380	COG0475	glutathione-regulated potassium exporter activity
FOC89_17395	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC89_17400	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOC89_17405	COG0833	amino acid
FOC89_17410	COG4990	cell redox homeostasis
FOC89_17425	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC89_17430	COG0697	spore germination
FOC89_17435	COG0531	amino acid
FOC89_17445	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC89_17450	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC89_17455	COG1918	ferrous iron import across plasma membrane
FOC89_17455	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC89_17460	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC89_17465	COG0573	inorganic phosphate transmembrane transporter activity
FOC89_17470	COG0581	inorganic phosphate transmembrane transporter activity
FOC89_17480	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC89_17600	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
FOC89_17620	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC89_17625	COG1116	anion transmembrane transporter activity
FOC89_17630	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC89_17635	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC89_17640	COG0352	thiamine-phosphate diphosphorylase activity
FOC89_17645	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC89_17650	COG2104	thiamine diphosphate biosynthetic process
FOC89_17660	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC89_17665	COG0351	phosphomethylpyrimidine kinase
FOC89_17705	COG2205	protein histidine kinase activity
FOC89_17710	COG2814	Major facilitator Superfamily
FOC89_17715	COG1846	Transcriptional regulator
FOC89_17730	COG2252	PERMEase
FOC89_17735	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_17740	COG1376	ErfK ybiS ycfS ynhG family protein
FOC89_17755	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC89_17795	COG0778	Nitroreductase
FOC89_17800	COG2719	SpoVR family
FOC89_17810	COG3591	Belongs to the peptidase S1B family
FOC89_17820	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC89_17825	COG1937	Protein conserved in bacteria
FOC89_17830	COG0425	Belongs to the sulfur carrier protein TusA family
FOC89_17830	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC89_17835	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC89_17835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_17840	COG0425	Belongs to the sulfur carrier protein TusA family
FOC89_17845	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC89_17855	COG2210	Belongs to the sulfur carrier protein TusA family
FOC89_17860	COG0730	response to heat
FOC89_17870	COG1316	TRANSCRIPTIONal
FOC89_17875	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC89_17880	COG1283	sodium-dependent phosphate transmembrane transporter activity
FOC89_17895	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC89_17895	COG3711	transcriptional antiterminator
FOC89_17900	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC89_17905	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC89_17925	COG3584	3D domain protein
FOC89_17925	COG1388	LysM domain
FOC89_17930	COG0577	efflux transmembrane transporter activity
FOC89_17935	COG1136	(ABC) transporter
FOC89_17945	COG5522	Integral membrane protein (intg_mem_TP0381)
FOC89_17960	COG1114	Component of the transport system for branched-chain amino acids
FOC89_17965	COG3546	catalase activity
FOC89_18000	COG0586	Pfam SNARE associated Golgi protein
FOC89_18035	COG0531	amino acid
FOC89_18040	COG0475	glutathione-regulated potassium exporter activity
FOC89_18050	COG1737	Transcriptional regulator
FOC89_18060	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC89_18060	COG1263	PTS System
FOC89_18070	COG2259	Doxx family
FOC89_18090	COG1522	sequence-specific DNA binding
FOC89_18105	COG2076	Multidrug Resistance protein
FOC89_18110	COG1309	transcriptional regulator
FOC89_18115	COG2814	Major facilitator Superfamily
FOC89_18120	COG1733	regulation of RNA biosynthetic process
FOC89_18130	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC89_18140	COG4533	DNA binding
FOC89_18145	COG2211	Major facilitator Superfamily
FOC89_18155	COG0693	protein deglycase activity
FOC89_18160	COG0693	protein deglycase activity
FOC89_18160	COG0753	catalase activity
FOC89_18170	COG0531	amino acid
FOC89_18175	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FOC89_18185	COG1012	belongs to the aldehyde dehydrogenase family
FOC89_18190	COG1132	(ABC) transporter
FOC89_18195	COG1132	(ABC) transporter
FOC89_18200	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC89_18205	COG0765	amino acid transport
FOC89_18210	COG1126	abc transporter atp-binding protein
FOC89_18225	COG0189	ligase activity
FOC89_18255	COG0028	Belongs to the TPP enzyme family
FOC89_18260	COG3527	Alpha-acetolactate decarboxylase
FOC89_18270	COG0561	phosphatase activity
FOC89_18280	COG3409	Peptidoglycan-binding domain 1 protein
FOC89_18280	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC89_18285	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC89_18300	COG0659	secondary active sulfate transmembrane transporter activity
FOC89_18325	COG0653	protein targeting
FOC89_18330	COG2244	polysaccharide biosynthetic process
FOC89_18340	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC89_18345	COG4196	transglutaminase domain protein
FOC89_18360	COG1696	Membrane protein involved in D-alanine export
FOC89_18375	COG1024	Enoyl-CoA hydratase
FOC89_18395	COG1363	Peptidase, m42
FOC89_18455	COG0601	transmembrane transport
FOC89_18460	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC89_18465	COG0444	Belongs to the ABC transporter superfamily
FOC89_18470	COG4608	Belongs to the ABC transporter superfamily
FOC89_18485	COG0477	Major facilitator Superfamily
FOC89_18490	COG3290	protein histidine kinase activity
FOC89_18495	COG4565	transcriptional regulatory protein
FOC89_18500	COG3181	Tripartite tricarboxylate transporter family receptor
FOC89_18530	COG0419	ATPase involved in DNA repair
FOC89_18540	COG1104	cysteine desulfurase activity
FOC89_18575	COG0789	Transcriptional regulator
FOC89_18575	COG4978	Transcriptional regulator
FOC89_18590	COG0305	Participates in initiation and elongation during chromosome replication
FOC89_18615	COG0477	Major facilitator Superfamily
FOC89_18690	COG1183	phosphatidylcholine synthase activity
FOC89_18720	COG2376	Dihydroxyacetone kinase
FOC89_18730	COG2376	Dihydroxyacetone kinase
FOC89_18745	COG2770	Histidine kinase
FOC89_18745	COG3437	response regulator, receiver
FOC89_18795	COG3237	CsbD-like
FOC89_18820	COG1191	sigma factor activity
FOC89_18830	COG2208	phosphoserine phosphatase activity
FOC89_18835	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC89_18840	COG2198	Histidine kinase
FOC89_18840	COG0784	Response regulator, receiver
FOC89_18840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC89_18840	COG2205	protein histidine kinase activity
FOC89_18900	COG0420	3'-5' exonuclease activity
FOC89_18905	COG4717	serine-type aminopeptidase activity
FOC89_18925	COG5444	nuclease activity
FOC89_18940	COG0346	lactoylglutathione lyase activity
FOC89_18945	COG0346	lactoylglutathione lyase activity
FOC89_18950	COG0457	Tetratricopeptide repeat
FOC89_18960	COG2267	carboxylic ester hydrolase activity
FOC89_18980	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC89_18985	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOC89_18995	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOC89_19020	COG0772	Belongs to the SEDS family
FOC89_19035	COG0477	Major facilitator Superfamily
FOC89_19040	COG0477	Major facilitator Superfamily
FOC89_19050	COG3973	AAA domain
FOC89_19055	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC89_19075	COG4980	gas vesicle protein
FOC89_19080	COG0537	adenosine 5'-monophosphoramidase activity
FOC89_19085	COG1131	(ABC) transporter
FOC89_19090	COG4473	ABC transporter
FOC89_19145	COG1309	transcriptional regulator
FOC89_19155	COG3402	PFAM membrane-flanked domain
FOC89_19160	COG3428	Bacterial PH domain
FOC89_19200	COG3402	PFAM membrane-flanked domain
FOC89_19205	COG3428	Bacterial PH domain
FOC89_19210	COG2329	Antibiotic biosynthesis monooxygenase
FOC89_19215	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC89_19255	COG1309	transcriptional regulator
FOC89_19260	COG1511	domain protein
FOC89_19280	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
FOC89_19290	COG2378	regulation of single-species biofilm formation
FOC89_19295	COG1609	Transcriptional regulator
FOC89_19305	COG1234	tRNA 3'-trailer cleavage
FOC89_19310	COG0095	Lipoate-protein ligase
FOC89_19320	COG0318	PFAM AMP-dependent synthetase and ligase
FOC89_19370	COG1408	metallophosphoesterase
FOC89_19380	COG1078	dGTPase activity
FOC89_19390	COG1595	DNA-templated transcription, initiation
FOC89_19395	COG2207	Transcriptional regulator
FOC89_19395	COG3708	Transcriptional regulator
FOC89_19410	COG2205	protein histidine kinase activity
FOC89_19415	COG0745	RESPONSE REGULATOR receiver
FOC89_19440	COG0501	Belongs to the peptidase M48B family
FOC89_19445	COG0840	transmembrane signaling receptor activity
FOC89_19450	COG0697	spore germination
FOC89_19470	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FOC89_19475	COG2224	Isocitrate lyase
FOC89_19500	COG4903	ComK protein
FOC89_19505	COG0398	Pfam SNARE associated Golgi protein
FOC89_19565	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC89_19590	COG0367	asparagine synthase
FOC89_19600	COG0753	catalase activity
FOC89_19605	COG0004	ammonium transporteR
FOC89_19625	COG2996	Protein conserved in bacteria
FOC89_19635	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC89_19645	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_19660	COG0561	phosphatase activity
FOC89_19670	COG0542	response to heat
FOC89_19680	COG2267	carboxylic ester hydrolase activity
FOC89_19695	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC89_19700	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC89_19705	COG5504	Zn-dependent protease
FOC89_19715	COG0180	Tryptophanyl-tRNA synthetase
FOC89_19725	COG4166	transmembrane transport
FOC89_19730	COG0601	transmembrane transport
FOC89_19735	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC89_19740	COG0444	Belongs to the ABC transporter superfamily
FOC89_19745	COG4608	Belongs to the ABC transporter superfamily
FOC89_19750	COG0534	Mate efflux family protein
FOC89_19755	COG4166	transmembrane transport
FOC89_19770	COG0861	Integral membrane protein TerC family
FOC89_19775	COG4862	establishment of competence for transformation
FOC89_19780	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC89_19790	COG1164	Oligoendopeptidase f
FOC89_19805	COG2346	COG2346, Truncated hemoglobins
FOC89_19810	COG4116	CYTH
FOC89_19820	COG2357	RelA SpoT domain protein
FOC89_19830	COG0564	pseudouridine synthase activity
FOC89_19845	COG0772	Belongs to the SEDS family
FOC89_19850	COG0463	Glycosyl transferase, family 2
FOC89_19850	COG1216	Glycosyl transferase, family 2
FOC89_19870	COG0463	Glycosyl transferase, family 2
FOC89_19870	COG0457	Tetratricopeptide repeat
FOC89_19890	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FOC89_19905	COG1091	dTDP-4-dehydrorhamnose reductase activity
FOC89_19950	COG2153	protein acetylation
FOC89_19960	COG2382	esterase
FOC89_19975	COG5492	domain, Protein
FOC89_19980	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC89_19990	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOC89_19990	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC89_20025	COG1620	l-lactate permease
FOC89_20030	COG5634	Uncharacterized conserved protein (DUF2278)
FOC89_20085	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC89_20095	COG1476	TRANSCRIPTIONal
FOC89_20150	COG2226	methyltransferase
FOC89_20160	COG1686	Belongs to the peptidase S11 family
FOC89_20165	COG0681	Belongs to the peptidase S26 family
FOC89_20200	COG1012	belongs to the aldehyde dehydrogenase family
FOC89_20210	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC89_20215	COG1177	transmembrane transport
FOC89_20220	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOC89_20230	COG2409	Drug exporters of the RND superfamily
FOC89_20240	COG0564	pseudouridine synthase activity
FOC89_20250	COG2340	Cysteine-rich secretory protein family
FOC89_20255	COG0247	lactate metabolic process
FOC89_20260	COG0277	FAD linked oxidase domain protein
FOC89_20265	COG3835	regulator
FOC89_20275	COG0745	RESPONSE REGULATOR receiver
FOC89_20280	COG5002	protein histidine kinase activity
FOC89_20285	COG2186	Transcriptional regulator
FOC89_20305	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FOC89_20315	COG2116	formate transmembrane transporter activity
FOC89_20320	COG0861	Integral membrane protein TerC family
FOC89_20325	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC89_20335	COG2030	dehydratase
FOC89_20355	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_20360	COG3243	poly(R)-hydroxyalkanoic acid synthase
FOC89_20370	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC89_20385	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC89_20390	COG3842	ATPase activity
FOC89_20415	COG1349	DNA-binding transcription factor activity
FOC89_20425	COG0235	Class ii aldolase
FOC89_20435	COG2861	carbohydrate metabolic process
FOC89_20445	COG3852	Histidine kinase
FOC89_20450	COG1846	Transcriptional regulator
FOC89_20460	COG2318	DinB family
FOC89_20465	COG5002	protein histidine kinase activity
FOC89_20475	COG0720	synthase
FOC89_20490	COG4873	Protein conserved in bacteria
FOC89_20520	COG1780	Probably involved in ribonucleotide reductase function
FOC89_20540	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOC89_20545	COG1725	Transcriptional regulator
FOC89_20550	COG1131	(ABC) transporter
FOC89_20560	COG1131	(ABC) transporter
FOC89_20565	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC89_20570	COG1266	CAAX protease self-immunity
FOC89_20580	COG1522	sequence-specific DNA binding
FOC89_20590	COG1335	isochorismatase
FOC89_20600	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC89_20605	COG2070	2-Nitropropane dioxygenase
FOC89_20610	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC89_20620	COG1696	Membrane protein involved in D-alanine export
FOC89_20645	COG0716	FMN binding
FOC89_20660	COG3173	Aminoglycoside phosphotransferase
FOC89_20680	COG0534	Mate efflux family protein
FOC89_20685	COG1968	undecaprenyl-diphosphatase activity
FOC89_20700	COG1846	Transcriptional regulator
FOC89_20710	COG1301	dicarboxylic acid transport
FOC89_20715	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC89_20720	COG4709	membrane
FOC89_20725	COG3874	Sporulation protein YtfJ
FOC89_20745	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC89_20750	COG0028	Belongs to the TPP enzyme family
FOC89_20755	COG0440	acetolactate synthase activity
FOC89_20760	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC89_20770	COG0473	3-isopropylmalate dehydrogenase activity
FOC89_20830	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC89_20845	COG1183	phosphatidylcholine synthase activity
FOC89_20850	COG1368	sulfuric ester hydrolase activity
FOC89_20860	COG0019	diaminopimelate decarboxylase activity
FOC89_20880	COG0529	Catalyzes the synthesis of activated sulfate
FOC89_20885	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC89_20905	COG1648	precorrin-2 dehydrogenase activity
FOC89_20910	COG0733	neurotransmitter:sodium symporter activity
FOC89_20930	COG1757	Na H antiporter
FOC89_20945	COG4758	membrane
FOC89_20950	COG4585	Histidine kinase
FOC89_20955	COG2197	response regulator
FOC89_20965	COG1114	Component of the transport system for branched-chain amino acids
FOC89_20975	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOC89_21015	COG0730	response to heat
FOC89_21020	COG0306	phosphate transporter
FOC89_21025	COG1392	Phosphate transport regulator
FOC89_21030	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC89_21045	COG3852	Histidine kinase
FOC89_21050	COG1801	Protein of unknown function DUF72
FOC89_21060	COG0582	viral genome integration into host DNA
FOC89_21065	COG5002	protein histidine kinase activity
FOC89_21085	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FOC89_21085	COG0392	lysyltransferase activity
FOC89_21100	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC89_21105	COG1686	Belongs to the peptidase S11 family
FOC89_21110	COG2715	membrane protein required for spore maturation
FOC89_21115	COG0700	Nucleoside recognition
FOC89_21120	COG1187	pseudouridine synthase activity
FOC89_21130	COG1333	cytochrome c biogenesis protein
FOC89_21135	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC89_21140	COG0745	RESPONSE REGULATOR receiver
FOC89_21145	COG5002	protein histidine kinase activity
FOC89_21150	COG2096	Adenosyltransferase
FOC89_21155	COG4942	peptidase
FOC89_21165	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FOC89_21170	COG1141	Ferredoxin
FOC89_21180	COG0514	ATP-dependent DNA helicase (RecQ)
FOC89_21185	COG1266	CAAX protease self-immunity
FOC89_21195	COG1408	metallophosphoesterase
FOC89_21205	COG4862	establishment of competence for transformation
FOC89_21210	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC89_21230	COG0492	ferredoxin-NADP+ reductase activity
FOC89_21305	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC89_21320	COG0142	geranyltranstransferase activity
FOC89_21330	COG0142	geranyltranstransferase activity
FOC89_21350	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC89_21355	COG0457	Tetratricopeptide repeat
FOC89_21375	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOC89_21385	COG4347	Protein of unknown function (DUF1405)
FOC89_21400	COG2738	Putative neutral zinc metallopeptidase
FOC89_21410	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_21415	COG1694	Mazg nucleotide pyrophosphohydrolase
FOC89_21430	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC89_21435	COG0438	transferase activity, transferring glycosyl groups
FOC89_21470	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOC89_21470	COG1199	ATP-dependent helicase activity
FOC89_21490	COG3935	DnaD domain protein
FOC89_21495	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOC89_21505	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC89_21505	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC89_21565	COG0116	Belongs to the methyltransferase superfamily
FOC89_21575	COG1199	ATP-dependent helicase activity
FOC89_21580	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FOC89_21590	COG3173	Aminoglycoside phosphotransferase
FOC89_21595	COG0024	Methionine aminopeptidase
FOC89_21605	COG2233	PERMEase
FOC89_21610	COG2311	Membrane
FOC89_21615	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC89_21625	COG0456	acetyltransferase
FOC89_21660	COG0754	glutathionylspermidine amidase activity
FOC89_21675	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC89_21700	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOC89_21715	COG1215	transferase activity, transferring glycosyl groups
FOC89_21720	COG0438	transferase activity, transferring glycosyl groups
FOC89_21735	COG0454	-acetyltransferase
FOC89_21755	COG0328	RNA-DNA hybrid ribonuclease activity
FOC89_21790	COG3403	YqcI/YcgG family
FOC89_21795	COG1280	lysine exporter protein (LysE YggA)
FOC89_21810	COG3162	membrane
FOC89_21815	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC89_21820	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC89_21830	COG0475	glutathione-regulated potassium exporter activity
FOC89_21835	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC89_21840	COG0789	Transcriptional regulator
FOC89_21840	COG4978	Transcriptional regulator
FOC89_21850	COG2323	membrane
FOC89_21855	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOC89_21910	COG1923	regulation of RNA biosynthetic process
FOC89_21920	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC89_21925	COG1360	Flagellar Motor Protein
FOC89_21930	COG2201	protein-glutamate methylesterase activity
FOC89_21935	COG2198	Histidine kinase
FOC89_21935	COG0643	Histidine kinase
FOC89_21940	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC89_21940	COG1776	CheC inhibitor of MCP methylation
FOC89_21955	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC89_21975	COG1256	bacterial-type flagellum assembly
FOC89_21980	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC89_21985	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FOC89_22000	COG1815	bacterial-type flagellum-dependent cell motility
FOC89_22005	COG1558	bacterial-type flagellum-dependent cell motility
FOC89_22015	COG1766	The M ring may be actively involved in energy transduction
FOC89_22020	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC89_22030	COG1157	protein secretion by the type III secretion system
FOC89_22065	COG0784	Response regulator, receiver
FOC89_22065	COG0835	chemotaxis
FOC89_22075	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC89_22080	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC89_22085	COG0741	lytic transglycosylase activity
FOC89_22095	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC89_22100	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC89_22100	COG1776	CheC inhibitor of MCP methylation
FOC89_22110	COG1338	Plays a role in the flagellum-specific transport system
FOC89_22115	COG1987	bacterial-type flagellum assembly
FOC89_22125	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC89_22130	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC89_22135	COG1419	protein localization to endoplasmic reticulum
FOC89_22140	COG4786	Flagellar basal body rod
FOC89_22145	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC89_22180	COG2329	Antibiotic biosynthesis monooxygenase
FOC89_22205	COG0583	DNA-binding transcription factor activity
FOC89_22210	COG3842	ATPase activity
FOC89_22215	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOC89_22225	COG1234	tRNA 3'-trailer cleavage
FOC89_22255	COG1686	Belongs to the peptidase S11 family
FOC89_22285	COG1846	Transcriptional regulator
FOC89_22295	COG0367	asparagine synthase
FOC89_22325	COG1802	Transcriptional regulator
FOC89_22330	COG0697	spore germination
FOC89_22335	COG0523	cobalamin synthesis protein
FOC89_22340	COG0701	Predicted permease
FOC89_22350	COG1216	Glycosyl transferase, family 2
FOC89_22350	COG0438	transferase activity, transferring glycosyl groups
FOC89_22355	COG1757	Na H antiporter
FOC89_22360	COG0789	Transcriptional regulator
FOC89_22370	COG0114	fumarate hydratase activity
FOC89_22390	COG0534	Mate efflux family protein
FOC89_22395	COG3340	Belongs to the peptidase S51 family
FOC89_22415	COG0785	Cytochrome C biogenesis protein
FOC89_22445	COG2733	membrane
FOC89_22480	COG1131	(ABC) transporter
FOC89_22495	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC89_22500	COG0528	UMP kinase activity
FOC89_22510	COG1027	Aspartate ammonia-lyase
FOC89_22515	COG0281	malic enzyme
FOC89_22520	COG4191	Histidine kinase
FOC89_22525	COG0784	Response regulator, receiver
FOC89_22530	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC89_22585	COG1051	belongs to the nudix hydrolase family
FOC89_22590	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC89_22600	COG2814	Major facilitator Superfamily
FOC89_22615	COG1966	Carbon starvation protein
FOC89_22625	COG0477	Major facilitator Superfamily
FOC89_22630	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC89_22640	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOC89_22645	COG4166	transmembrane transport
FOC89_22650	COG2223	nitrite transmembrane transporter activity
FOC89_22655	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC89_22670	COG2244	polysaccharide biosynthetic process
FOC89_22675	COG0733	neurotransmitter:sodium symporter activity
FOC89_22685	COG5566	PFAM Mor transcription activator
FOC89_22690	COG2323	membrane
FOC89_22705	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC89_22715	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC89_22720	COG0028	Belongs to the TPP enzyme family
FOC89_22725	COG0440	acetolactate synthase activity
FOC89_22730	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC89_22740	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC89_22765	COG2814	Major facilitator Superfamily
FOC89_22770	COG3384	dioxygenase
FOC89_22780	COG3279	Response regulator of the LytR AlgR family
FOC89_22785	COG0427	acetyl-CoA hydrolase
FOC89_22805	COG1073	alpha beta
FOC89_22810	COG0582	viral genome integration into host DNA
FOC89_22820	COG1396	sequence-specific DNA binding
FOC89_22840	COG1396	sequence-specific DNA binding
FOC89_22870	COG1484	DNA-dependent DNA replication
FOC89_22925	COG0662	Cupin 2, conserved barrel domain protein
FOC89_22960	COG0582	viral genome integration into host DNA
FOC89_22965	COG2323	membrane
FOC89_22975	COG4980	gas vesicle protein
FOC89_22975	COG1674	ftsk spoiiie
FOC89_23020	COG1802	Transcriptional regulator
FOC89_23020	COG4626	Terminase
FOC89_23030	COG0740	serine-type endopeptidase activity
FOC89_23095	COG4824	toxin secretion phage lysis holin
FOC89_23135	COG4166	transmembrane transport
FOC89_23165	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC89_23185	COG1914	H( )-stimulated, divalent metal cation uptake system
FOC89_23200	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC89_23205	COG0531	amino acid
FOC89_23230	COG2390	Transcriptional regulator
FOC89_23240	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC89_23245	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOC89_23255	COG4846	Membrane protein involved in cytochrome C biogenesis
FOC89_23280	COG0006	proline dipeptidase activity
FOC89_23285	COG2132	Multicopper oxidase
FOC89_23320	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOC89_23325	COG1114	Component of the transport system for branched-chain amino acids
FOC89_23335	COG2372	response to copper ion
FOC89_23335	COG1276	copper resistance
FOC89_23340	COG4549	nuclear export factor GLE1
FOC89_23345	COG0697	spore germination
FOC89_23350	COG0583	DNA-binding transcription factor activity
FOC89_23355	COG1959	2 iron, 2 sulfur cluster binding
FOC89_23360	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FOC89_23365	COG0778	Nitroreductase
FOC89_23375	COG0628	permease
FOC89_23385	COG1231	oxidoreductase activity
FOC89_23390	COG0523	cobalamin synthesis protein
FOC89_23405	COG0318	PFAM AMP-dependent synthetase and ligase
FOC89_23410	COG2030	dehydratase
FOC89_23415	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC89_23425	COG0411	ABC transporter
FOC89_23445	COG0583	DNA-binding transcription factor activity
FOC89_23475	COG1271	oxidase subunit
FOC89_23480	COG1294	oxidase, subunit
FOC89_23485	COG4988	ABC transporter
FOC89_23490	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOC89_23505	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC89_23510	COG1686	Belongs to the peptidase S11 family
FOC89_23525	COG0791	NLP P60 protein
FOC89_23525	COG1388	LysM domain
FOC89_23535	COG1132	(ABC) transporter
FOC89_23540	COG0745	RESPONSE REGULATOR receiver
FOC89_23545	COG5002	protein histidine kinase activity
FOC89_23555	COG0300	oxidoreductase activity
FOC89_23575	COG5658	integral membrane protein
FOC89_23590	COG0460	homoserine dehydrogenase
FOC89_23615	COG1316	TRANSCRIPTIONal
FOC89_23625	COG0745	RESPONSE REGULATOR receiver
FOC89_23630	COG5002	protein histidine kinase activity
FOC89_23645	COG1285	pathogenesis
FOC89_23650	COG1247	-acetyltransferase
FOC89_23660	COG4264	IucA IucC family
FOC89_23665	COG0318	PFAM AMP-dependent synthetase and ligase
FOC89_23680	COG1082	Xylose isomerase domain protein TIM barrel
FOC89_23690	COG2814	Major facilitator Superfamily
FOC89_23695	COG1279	arginine transmembrane transporter activity
FOC89_23705	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC89_23740	COG0577	efflux transmembrane transporter activity
FOC89_23745	COG2002	toxin-antitoxin pair type II binding
FOC89_23760	COG1404	Belongs to the peptidase S8 family
FOC89_23765	COG0640	Transcriptional regulator
FOC89_23770	COG0667	Aldo Keto reductase
FOC89_23775	COG2814	Major facilitator Superfamily
FOC89_23800	COG0840	transmembrane signaling receptor activity
FOC89_23815	COG3949	Membrane
FOC89_23820	COG0783	Belongs to the Dps family
FOC89_23835	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC89_23845	COG1231	oxidoreductase activity
FOC89_23855	COG4989	oxidoreductase activity
FOC89_23860	COG0523	cobalamin synthesis protein
FOC89_23865	COG0456	acetyltransferase
FOC89_23925	COG3443	Belongs to the bacterial solute-binding protein 9 family
FOC89_23925	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC89_23935	COG0702	epimerase
FOC89_23945	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC89_23955	COG4166	transmembrane transport
FOC89_23970	COG0406	alpha-ribazole phosphatase activity
FOC89_23980	COG5337	Spore coat protein CotH
FOC89_23985	COG1051	belongs to the nudix hydrolase family
FOC89_23990	COG0586	Pfam SNARE associated Golgi protein
FOC89_23995	COG2244	polysaccharide biosynthetic process
FOC89_24005	COG0701	Predicted permease
FOC89_24010	COG3689	TIGRFAM TIGR03943 family protein
FOC89_24015	COG1607	acyl-coa hydrolase
FOC89_24025	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC89_24040	COG0702	epimerase
FOC89_24045	COG2839	Protein conserved in bacteria
FOC89_24050	COG1253	flavin adenine dinucleotide binding
FOC89_24065	COG1114	Component of the transport system for branched-chain amino acids
FOC89_24070	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC89_24090	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC89_24100	COG1876	peptidase activity
FOC89_24110	COG0154	amidase activity
FOC89_24115	COG2211	Major facilitator Superfamily
FOC89_24135	COG0561	phosphatase activity
FOC89_24145	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC89_24150	COG4106	trans-aconitate 2-methyltransferase activity
FOC89_24165	COG1819	glycosyl
FOC89_24170	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_24175	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC89_24205	COG0456	acetyltransferase
FOC89_24275	COG3874	Sporulation protein YtfJ
FOC89_24300	COG2226	methyltransferase
FOC89_24325	COG0346	lactoylglutathione lyase activity
FOC89_24335	COG0604	alcohol dehydrogenase
FOC89_24340	COG1595	DNA-templated transcription, initiation
FOC89_24355	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FOC89_24375	COG0386	Belongs to the glutathione peroxidase family
FOC89_24380	COG1305	Transglutaminase-like
FOC89_24385	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
FOC89_24390	COG0714	Associated with various cellular activities
FOC89_24395	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOC89_24400	COG1140	nitrate reductase beta subunit
FOC89_24405	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOC89_24410	COG2181	nitrate reductase activity
FOC89_24420	COG1959	2 iron, 2 sulfur cluster binding
FOC89_24425	COG3118	belongs to the thioredoxin family
FOC89_24430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC89_24435	COG4918	Iron-sulphur cluster biosynthesis
FOC89_24440	COG1764	response to oxidative stress
FOC89_24445	COG1335	isochorismatase
FOC89_24455	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC89_24460	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC89_24465	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC89_24470	COG0303	'Molybdopterin
FOC89_24475	COG0314	molybdopterin synthase activity
FOC89_24485	COG2223	nitrite transmembrane transporter activity
FOC89_24495	COG1648	precorrin-2 dehydrogenase activity
FOC89_24505	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC89_24505	COG1587	Uroporphyrinogen-III synthase
FOC89_24510	COG2146	nitrite reductase [NAD(P)H] activity
FOC89_24515	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC89_24520	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
FOC89_24555	COG2359	stage V sporulation protein S
FOC89_24580	COG1418	mRNA catabolic process
FOC89_24585	COG0488	(ABC) transporter
FOC89_24600	COG0629	single-stranded DNA binding
FOC89_24605	COG1413	lyase activity
FOC89_24620	COG2136	Putative SAM-dependent methyltransferase
FOC89_24620	COG2521	methyltransferase
FOC89_24625	COG0018	arginyl-trna synthetase
FOC89_24665	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOC89_24670	COG0017	Asparaginyl-tRNA synthetase
FOC89_24690	COG1674	ftsk spoiiie
FOC89_24775	COG1929	Belongs to the glycerate kinase type-1 family
FOC89_24780	COG0471	metal ion transport
FOC89_24785	COG0745	RESPONSE REGULATOR receiver
FOC89_24790	COG3850	Histidine kinase
FOC89_24790	COG5002	protein histidine kinase activity
FOC89_24805	COG0733	neurotransmitter:sodium symporter activity
FOC89_24830	COG2610	gluconate transmembrane transporter activity
FOC89_24835	COG1454	alcohol dehydrogenase
FOC89_24840	COG1794	racemase activity, acting on amino acids and derivatives
FOC89_24850	COG0456	acetyltransferase
FOC89_24855	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOC89_24865	COG1131	(ABC) transporter
FOC89_24870	COG4473	ABC transporter
FOC89_24880	COG0546	phosphoglycolate phosphatase activity
FOC89_24900	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC89_24915	COG0768	penicillin binding
FOC89_24925	COG0204	Acyl-transferase
FOC89_24930	COG1272	protein, Hemolysin III
FOC89_24940	COG0805	protein transport
FOC89_24950	COG1307	EDD domain protein, DegV family
FOC89_24955	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FOC89_24960	COG1999	signal sequence binding
FOC89_24965	COG0071	Belongs to the small heat shock protein (HSP20) family
FOC89_24970	COG0367	asparagine synthase
FOC89_24985	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC89_24990	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC89_25010	COG1335	isochorismatase
FOC89_25015	COG1051	belongs to the nudix hydrolase family
FOC89_25020	COG0071	Belongs to the small heat shock protein (HSP20) family
FOC89_25025	COG0668	transmembrane transport
FOC89_25030	COG2203	Gaf domain
FOC89_25030	COG4585	Histidine kinase
FOC89_25035	COG2197	response regulator
FOC89_25045	COG1064	alcohol dehydrogenase
FOC89_25070	COG1070	Carbohydrate kinase
FOC89_25075	COG1070	Carbohydrate kinase
FOC89_25105	COG1125	glycine betaine transport
FOC89_25105	COG0517	IMP dehydrogenase activity
FOC89_25110	COG1174	glycine betaine transport
FOC89_25145	COG1253	flavin adenine dinucleotide binding
FOC89_25150	COG1012	belongs to the aldehyde dehydrogenase family
FOC89_25155	COG5506	Protein of unknown function (DUF1694)
FOC89_25170	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC89_25175	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOC89_25180	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC89_25185	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC89_25190	COG0456	acetyltransferase
FOC89_25195	COG3829	transcription factor binding
FOC89_25200	COG1509	lysine 2,3-aminomutase activity
FOC89_25240	COG4326	sporulation control protein
FOC89_25245	COG0671	phosphoesterase, PA-phosphatase related
FOC89_25250	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC89_25255	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC89_25270	COG5444	nuclease activity
FOC89_25350	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC89_25390	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC89_25390	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC89_25395	COG2814	Major facilitator Superfamily
FOC89_25400	COG4841	protein insertion into membrane
FOC89_25405	COG0372	Belongs to the citrate synthase family
FOC89_25410	COG2079	MmgE PrpD family protein
FOC89_25415	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FOC89_25420	COG1960	acyl-CoA dehydrogenase activity
FOC89_25425	COG2084	Dehydrogenase
FOC89_25435	COG1280	lysine exporter protein (LysE YggA)
FOC89_25440	COG1024	Enoyl-CoA hydratase
FOC89_25455	COG0420	3'-5' exonuclease activity
FOC89_25460	COG0419	ATPase involved in DNA repair
FOC89_25475	COG2223	nitrite transmembrane transporter activity
FOC89_25480	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_25485	COG1169	isochorismate synthase
FOC89_25490	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOC89_25495	COG3433	isochorismatase activity
FOC89_25495	COG1535	isochorismatase
FOC89_25500	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC89_25505	COG3251	PFAM MbtH domain protein
FOC89_25510	COG2814	Major facilitator Superfamily
FOC89_25525	COG0776	regulation of translation
FOC89_25535	COG2318	DinB family
FOC89_25545	COG1115	amino acid carrier protein
FOC89_25560	COG2329	Antibiotic biosynthesis monooxygenase
FOC89_25565	COG1187	pseudouridine synthase activity
FOC89_25570	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC89_25575	COG1136	(ABC) transporter
FOC89_25585	COG0596	Alpha beta hydrolase
FOC89_25605	COG2226	methyltransferase
FOC89_25640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_25675	COG1247	-acetyltransferase
FOC89_25715	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC89_25725	COG1278	Cold shock
FOC89_25740	COG0010	Belongs to the arginase family
FOC89_25745	COG0561	phosphatase activity
FOC89_25790	COG0583	DNA-binding transcription factor activity
FOC89_25795	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC89_25810	COG0583	DNA-binding transcription factor activity
FOC89_25815	COG2258	MOSC domain
FOC89_25830	COG1132	(ABC) transporter
FOC89_25835	COG1132	(ABC) transporter
FOC89_25855	COG1396	sequence-specific DNA binding
FOC89_25885	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC89_25895	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
FOC89_25900	COG1595	DNA-templated transcription, initiation
FOC89_25930	COG1649	PFAM Uncharacterised BCR, COG1649
FOC89_25955	COG2971	BadF BadG BcrA BcrD
FOC89_25965	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOC89_26000	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_26095	COG0582	viral genome integration into host DNA
FOC89_26115	COG0577	efflux transmembrane transporter activity
FOC89_26115	COG1136	(ABC) transporter
FOC89_26120	COG3615	Tellurite resistance protein tehB
FOC89_26120	COG0500	methyltransferase
FOC89_26135	COG3961	Belongs to the TPP enzyme family
FOC89_26140	COG1846	Transcriptional regulator
FOC89_26170	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC89_26185	COG1595	DNA-templated transcription, initiation
FOC89_26195	COG0768	penicillin binding
FOC89_26205	COG2367	Beta-lactamase
FOC89_26210	COG0671	phosphoesterase, PA-phosphatase related
FOC89_26215	COG1609	Transcriptional regulator
FOC89_26220	COG2814	Major facilitator Superfamily
FOC89_26225	COG0673	inositol 2-dehydrogenase activity
FOC89_26255	COG3718	enzyme involved in inositol metabolism
FOC89_26270	COG0737	Belongs to the 5'-nucleotidase family
FOC89_26280	COG0457	Tetratricopeptide repeat
FOC89_26285	COG1476	TRANSCRIPTIONal
FOC89_26300	COG1876	peptidase activity
FOC89_26320	COG1309	transcriptional regulator
FOC89_26355	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC89_26370	COG1131	(ABC) transporter
FOC89_26380	COG1309	transcriptional regulator
FOC89_26395	COG1960	acyl-CoA dehydrogenase activity
FOC89_26400	COG0439	Biotin carboxylase
FOC89_26405	COG0511	ligase activity, forming carbon-carbon bonds
FOC89_26410	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC89_26415	COG1024	Enoyl-CoA hydratase
FOC89_26420	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC89_26425	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC89_26435	COG1247	-acetyltransferase
FOC89_26440	COG0572	uridine kinase
FOC89_26450	COG2318	DinB family
FOC89_26455	COG1686	Belongs to the peptidase S11 family
FOC89_26480	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC89_26500	COG3227	Zinc metalloprotease (Elastase)
FOC89_26540	COG2814	Major facilitator Superfamily
FOC89_26560	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC89_26580	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC89_26595	COG1063	alcohol dehydrogenase
FOC89_26615	COG3386	PFAM SMP-30 Gluconolaconase
FOC89_26625	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
FOC89_26630	COG3773	Cell wall hydrolase
FOC89_26640	COG0745	RESPONSE REGULATOR receiver
FOC89_26645	COG2205	protein histidine kinase activity
FOC89_26670	COG1136	(ABC) transporter
FOC89_26675	COG0577	efflux transmembrane transporter activity
FOC89_26695	COG0460	homoserine dehydrogenase
FOC89_26700	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC89_26710	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC89_26775	COG2124	cytochrome p450
FOC89_26810	COG0561	phosphatase activity
FOC89_26815	COG5002	protein histidine kinase activity
FOC89_26825	COG1819	glycosyl
FOC89_26830	COG1794	racemase activity, acting on amino acids and derivatives
FOC89_26855	COG2205	protein histidine kinase activity
FOC89_26870	COG0604	alcohol dehydrogenase
FOC89_26885	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC89_26920	COG0693	protein deglycase activity
FOC89_26950	COG2814	Major facilitator Superfamily
FOC89_26965	COG0584	glycerophosphoryl diester phosphodiesterase
FOC89_26980	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC89_26985	COG0697	spore germination
FOC89_27025	COG2223	nitrite transmembrane transporter activity
FOC89_27045	COG0592	DNA-directed DNA polymerase activity
FOC89_27050	COG1051	belongs to the nudix hydrolase family
FOC89_27085	COG3878	Protein conserved in bacteria
FOC89_27105	COG4667	esterase of the alpha-beta hydrolase superfamily
FOC89_27130	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC89_27145	COG0322	excinuclease ABC activity
FOC89_27185	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC89_27210	COG1011	Hydrolase
FOC89_27225	COG1073	alpha beta
FOC89_27235	COG0076	glutamate decarboxylase activity
FOC89_27250	COG1523	belongs to the glycosyl hydrolase 13 family
FOC89_27255	COG3227	Zinc metalloprotease (Elastase)
FOC89_27275	COG0201	protein transport
FOC89_27285	COG0697	spore germination
FOC89_27290	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC89_27330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC89_27345	COG2959	enzyme of heme biosynthesis
FOC89_27380	COG1309	transcriptional regulator
FOC89_27410	COG3284	Transcriptional regulator
FOC89_27430	COG1349	DNA-binding transcription factor activity
FOC89_27450	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC89_27455	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC89_27460	COG0022	dehydrogenase e1 component
FOC89_27465	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC89_27475	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_27480	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC89_27480	COG0456	acetyltransferase
FOC89_27485	COG0572	uridine kinase
FOC89_27515	COG4176	ABC-type proline glycine betaine transport system permease component
FOC89_27520	COG0517	IMP dehydrogenase activity
FOC89_27520	COG4175	Glycine betaine
FOC89_27550	COG2153	protein acetylation
FOC89_27555	COG3397	chitin binding
FOC89_27570	COG2205	protein histidine kinase activity
FOC89_27575	COG2226	methyltransferase
FOC89_27600	COG0658	competence protein
FOC89_27600	COG2333	competence protein COMEC
FOC89_27650	COG3973	AAA domain
FOC89_27665	COG2105	PFAM AIG2 family protein
FOC89_27670	COG0514	ATP-dependent DNA helicase (RecQ)
FOC89_27690	COG4637	Psort location Cytoplasmic, score
FOC89_27715	COG3397	chitin binding
FOC89_27730	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC89_27735	COG1115	amino acid carrier protein
FOC89_27740	COG1012	belongs to the aldehyde dehydrogenase family
FOC89_27745	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC89_27755	COG3938	Belongs to the proline racemase family
FOC89_27760	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC89_27800	COG0586	Pfam SNARE associated Golgi protein
FOC89_27815	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC89_27820	COG0519	Catalyzes the synthesis of GMP from XMP
FOC89_27825	COG4166	transmembrane transport
FOC89_27835	COG4948	Mandelate Racemase Muconate Lactonizing
FOC89_27880	COG2936	dipeptidyl-peptidase activity
FOC89_27885	COG5002	protein histidine kinase activity
FOC89_27890	COG0745	RESPONSE REGULATOR receiver
FOC89_27925	COG1164	Oligoendopeptidase f
FOC89_27935	COG1307	EDD domain protein, DegV family
FOC89_27955	COG2814	Major facilitator Superfamily
FOC89_27965	COG1664	Polymer-forming cytoskeletal
FOC89_27970	COG0789	Transcriptional regulator
FOC89_27975	COG4533	DNA binding
FOC89_27980	COG2814	Major facilitator Superfamily
FOC89_27980	COG0477	Major facilitator Superfamily
FOC89_28000	COG2261	transglycosylase associated protein
FOC89_28015	COG2226	methyltransferase
FOC89_28050	COG0436	Aminotransferase
FOC89_28055	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOC89_28060	COG5146	pantothenate kinase activity
FOC89_28065	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FOC89_28080	COG1131	(ABC) transporter
FOC89_28130	COG0628	permease
FOC89_28140	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC89_28145	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC89_28150	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC89_28155	COG1116	anion transmembrane transporter activity
FOC89_28195	COG2746	aminoglycoside 3-N-acetyltransferase activity
FOC89_28220	COG0697	spore germination
FOC89_28225	COG2318	DinB family
FOC89_28245	COG4912	Dna alkylation repair
FOC89_28265	COG0861	Integral membrane protein TerC family
FOC89_28270	COG1368	sulfuric ester hydrolase activity
FOC89_28275	COG0488	(ABC) transporter
FOC89_28285	COG1033	growth of symbiont in host cell
FOC89_28285	COG2409	Drug exporters of the RND superfamily
FOC89_28290	COG1309	transcriptional regulator
FOC89_28305	COG0287	Prephenate dehydrogenase
FOC89_28310	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC89_28320	COG1605	Chorismate mutase
FOC89_28320	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FOC89_28355	COG1388	LysM domain
FOC89_28355	COG3584	3D domain protein
FOC89_28365	COG2610	gluconate transmembrane transporter activity
FOC89_28370	COG1024	Enoyl-CoA hydratase
FOC89_28380	COG3829	transcription factor binding
FOC89_28380	COG3290	protein histidine kinase activity
FOC89_28395	COG1879	ABC-type sugar transport system periplasmic component
FOC89_28405	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC89_28415	COG2390	Transcriptional regulator
FOC89_28420	COG1070	Carbohydrate kinase
FOC89_28450	COG2329	Antibiotic biosynthesis monooxygenase
FOC89_28470	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC89_28480	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FOC89_28485	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC89_28500	COG4187	Peptidase family M20/M25/M40
FOC89_28505	COG1414	Transcriptional regulator
FOC89_28510	COG0833	amino acid
FOC89_28515	COG1690	Belongs to the RtcB family
FOC89_28520	COG3239	Fatty acid desaturase
FOC89_28525	COG1785	Belongs to the alkaline phosphatase family
FOC89_28535	COG3655	Transcriptional regulator
FOC89_28550	COG4377	Putative membrane peptidase family (DUF2324)
FOC89_28560	COG3279	Response regulator of the LytR AlgR family
FOC89_28570	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC89_28575	COG0346	lactoylglutathione lyase activity
FOC89_28595	COG0714	Associated with various cellular activities
FOC89_28620	COG0463	Glycosyl transferase, family 2
FOC89_28635	COG0463	Glycosyl transferase, family 2
FOC89_28645	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC89_28650	COG0753	catalase activity
FOC89_28660	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FOC89_28685	COG0714	Associated with various cellular activities
FOC89_28695	COG0778	Nitroreductase
FOC89_28700	COG1846	Transcriptional regulator
FOC89_28720	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC89_28730	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC89_28735	COG0824	Thioesterase
FOC89_28740	COG0318	PFAM AMP-dependent synthetase and ligase
FOC89_28745	COG0183	Belongs to the thiolase family
FOC89_28750	COG1024	Enoyl-CoA hydratase
FOC89_28755	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC89_28760	COG2723	6-phospho-beta-galactosidase activity
FOC89_28765	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC89_28770	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC89_28775	COG0588	phosphoglycerate mutase activity
FOC89_28785	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC89_28795	COG2508	Transcriptional regulator
FOC89_28800	COG2814	Major facilitator Superfamily
FOC89_28805	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FOC89_28835	COG1725	Transcriptional regulator
FOC89_28845	COG1136	(ABC) transporter
FOC89_28870	COG2207	Transcriptional regulator
FOC89_28875	COG0456	acetyltransferase
FOC89_28895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC89_28940	COG0730	response to heat
FOC89_28950	COG0833	amino acid
FOC89_28960	COG4335	DNA alkylation repair
FOC89_29025	COG1984	allophanate hydrolase subunit 2
FOC89_29030	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOC89_29035	COG1414	Transcriptional regulator
FOC89_29050	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC89_29055	COG0640	Transcriptional regulator
FOC89_29065	COG1960	acyl-CoA dehydrogenase activity
FOC89_29095	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
FOC89_29110	COG3848	Pyruvate phosphate dikinase
FOC89_29110	COG0574	Belongs to the PEP-utilizing enzyme family
FOC89_29115	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_29130	COG5577	PFAM Coat F domain
FOC89_29135	COG3403	YqcI/YcgG family
FOC89_29140	COG1280	lysine exporter protein (LysE YggA)
FOC89_29145	COG1113	amino acid transport
FOC89_29175	COG1063	alcohol dehydrogenase
FOC89_29185	COG1027	Aspartate ammonia-lyase
FOC89_29190	COG0252	asparaginase activity
FOC89_29195	COG1396	sequence-specific DNA binding
FOC89_29225	COG5002	protein histidine kinase activity
FOC89_29250	COG2207	Transcriptional regulator
FOC89_29265	COG0322	excinuclease ABC activity
FOC89_29270	COG0531	amino acid
FOC89_29275	COG1114	Component of the transport system for branched-chain amino acids
FOC89_29280	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC89_29300	COG0531	amino acid
FOC89_29305	COG0697	spore germination
FOC89_29310	COG0784	Response regulator, receiver
FOC89_29315	COG4191	Histidine kinase
FOC89_29320	COG2066	Belongs to the glutaminase family
FOC89_29325	COG1115	amino acid carrier protein
FOC89_29335	COG0737	Belongs to the 5'-nucleotidase family
FOC89_29340	COG0753	catalase activity
FOC89_29345	COG2267	carboxylic ester hydrolase activity
FOC89_29350	COG1335	isochorismatase
FOC89_29355	COG1335	isochorismatase
FOC89_29370	COG0583	DNA-binding transcription factor activity
FOC89_29375	COG1846	Transcriptional regulator
FOC89_29380	COG0598	Magnesium transport protein CorA
FOC89_29415	COG0415	Belongs to the DNA photolyase family
FOC89_29420	COG0288	reversible hydration of carbon dioxide
FOC89_29430	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC89_29435	COG5609	conserved protein (DUF2294)
FOC89_29450	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC89_29455	COG2267	carboxylic ester hydrolase activity
FOC89_29460	COG4641	Protein conserved in bacteria
FOC89_29465	COG1136	(ABC) transporter
FOC89_29490	COG0798	PFAM Bile acid sodium symporter
FOC89_29495	COG0346	lactoylglutathione lyase activity
FOC89_29500	COG0640	Transcriptional regulator
FOC89_29520	COG5002	protein histidine kinase activity
FOC89_29525	COG0745	RESPONSE REGULATOR receiver
FOC89_29530	COG0456	acetyltransferase
FOC89_29540	COG3320	Male sterility
FOC89_29540	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC89_29545	COG1309	transcriptional regulator
FOC89_29550	COG1028	Short-chain dehydrogenase reductase Sdr
FOC89_29555	COG1522	sequence-specific DNA binding
FOC89_29570	COG0346	lactoylglutathione lyase activity
FOC89_29590	COG2169	Transcriptional regulator
FOC89_29635	COG2814	Major facilitator Superfamily
FOC89_29660	COG0745	RESPONSE REGULATOR receiver
FOC89_29665	COG3850	Histidine kinase
FOC89_29665	COG5002	protein histidine kinase activity
FOC89_29690	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FOC89_29715	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC89_29720	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC89_29730	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC89_29745	COG2309	aminopeptidase activity
FOC89_29755	COG0789	Transcriptional regulator
FOC89_29775	COG1136	(ABC) transporter
FOC89_29780	COG0577	efflux transmembrane transporter activity
FOC89_29795	COG3850	Histidine kinase
FOC89_29795	COG5002	protein histidine kinase activity
FOC89_29805	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC89_29810	COG2271	Major facilitator Superfamily
FOC89_29815	COG1556	Lactate utilization protein
FOC89_29820	COG1139	Iron-sulfur cluster binding protein
FOC89_29830	COG0583	DNA-binding transcription factor activity
FOC89_29840	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC89_29860	COG0738	Major facilitator superfamily
FOC89_29865	COG0673	inositol 2-dehydrogenase activity
FOC89_29870	COG0561	phosphatase activity
FOC89_29875	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC89_29880	COG1609	Transcriptional regulator
FOC89_29885	COG0457	Tetratricopeptide repeat
FOC89_29905	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOC89_29930	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC89_29940	COG0814	amino acid
FOC89_29945	COG1760	l-serine dehydratase
FOC89_29950	COG1760	l-serine dehydratase
FOC89_29960	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC89_29965	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FOC89_29975	COG1335	isochorismatase
FOC89_29980	COG1522	sequence-specific DNA binding
FOC89_29985	COG0531	amino acid
FOC89_30000	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC89_30020	COG0662	Cupin 2, conserved barrel domain protein
FOC89_30025	COG2207	Transcriptional regulator
FOC89_30025	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC89_30045	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC89_30045	COG3409	Peptidoglycan-binding domain 1 protein
FOC89_30085	COG0477	Major facilitator Superfamily
FOC89_30095	COG1846	Transcriptional regulator
FOC89_30100	COG2814	Major facilitator Superfamily
FOC89_30115	COG2076	Multidrug Resistance protein
FOC89_30120	COG1309	transcriptional regulator
FOC89_30130	COG2031	fatty acid transporter
FOC89_30140	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC89_30175	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates