locus-tag	class	description
FOC90_00010	COG3620	sequence-specific DNA binding
FOC90_00135	COG3481	metal-dependent phosphohydrolase, HD sub domain
FOC90_00210	COG2815	serine threonine protein kinase
FOC90_00210	COG0515	serine threonine protein kinase
FOC90_00630	COG0484	heat shock protein binding
FOC90_00735	COG0210	DNA helicase
FOC90_01010	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC90_01010	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC90_01030	COG3764	Sortase (surface protein transpeptidase)
FOC90_01160	COG4990	cell redox homeostasis
FOC90_01300	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC90_01570	COG0187	DNA topoisomerase II activity
FOC90_01575	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC90_01640	COG0358	DNA primase activity
FOC90_01850	COG1876	peptidase activity
FOC90_02010	COG5263	repeat protein
FOC90_02010	COG4193	domain, Protein
FOC90_02145	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC90_02145	COG3409	Peptidoglycan-binding domain 1 protein
FOC90_02150	COG3409	Peptidoglycan-binding domain 1 protein
FOC90_02150	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC90_02300	COG3091	SprT-like family
FOC90_02605	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOC90_02610	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOC90_02615	COG1780	Probably involved in ribonucleotide reductase function
FOC90_02620	COG4974	Belongs to the 'phage' integrase family
FOC90_02640	COG1404	Belongs to the peptidase S8 family
FOC90_02645	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC90_02655	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOC90_02665	COG0861	Integral membrane protein TerC family
FOC90_02675	COG2310	stress, protein
FOC90_02680	COG2310	stress, protein
FOC90_02705	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FOC90_02765	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC90_02890	COG1428	Deoxynucleoside kinase
FOC90_02910	COG5002	protein histidine kinase activity
FOC90_02915	COG5002	protein histidine kinase activity
FOC90_02930	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC90_02935	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FOC90_02980	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FOC90_02985	COG0756	dUTP diphosphatase activity
FOC90_03010	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FOC90_03015	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FOC90_03050	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FOC90_03060	COG0629	single-stranded DNA binding
FOC90_03175	COG3409	Peptidoglycan-binding domain 1 protein
FOC90_03175	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC90_03175	COG1388	LysM domain
FOC90_03235	COG0457	Tetratricopeptide repeat
FOC90_03275	COG4474	Belongs to the UPF0398 family
FOC90_03385	COG1393	Belongs to the ArsC family
FOC90_03410	COG2088	sporulation resulting in formation of a cellular spore
FOC90_03440	COG0617	tRNA 3'-terminal CCA addition
FOC90_03690	COG0322	excinuclease ABC activity
FOC90_03695	COG0531	amino acid
FOC90_03700	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC90_03710	COG0531	amino acid
FOC90_03720	COG0784	Response regulator, receiver
FOC90_03725	COG4191	Histidine kinase
FOC90_03735	COG1115	amino acid carrier protein
FOC90_03745	COG2124	cytochrome p450
FOC90_03760	COG0737	Belongs to the 5'-nucleotidase family
FOC90_03770	COG1335	isochorismatase
FOC90_03790	COG0583	DNA-binding transcription factor activity
FOC90_03795	COG1846	Transcriptional regulator
FOC90_03800	COG0598	Magnesium transport protein CorA
FOC90_03820	COG1073	alpha beta
FOC90_03840	COG0415	Belongs to the DNA photolyase family
FOC90_03845	COG0288	reversible hydration of carbon dioxide
FOC90_03855	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC90_03860	COG5609	conserved protein (DUF2294)
FOC90_03875	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC90_03880	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC90_03885	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOC90_03890	COG1121	(ABC) transporter
FOC90_03910	COG0798	PFAM Bile acid sodium symporter
FOC90_03915	COG0346	lactoylglutathione lyase activity
FOC90_03920	COG0640	Transcriptional regulator
FOC90_03930	COG0583	DNA-binding transcription factor activity
FOC90_03970	COG1476	TRANSCRIPTIONal
FOC90_03980	COG0825	malonyl-CoA metabolic process
FOC90_03990	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC90_03990	COG3320	Male sterility
FOC90_03995	COG1309	transcriptional regulator
FOC90_04000	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_04005	COG1522	sequence-specific DNA binding
FOC90_04020	COG0346	lactoylglutathione lyase activity
FOC90_04045	COG0745	RESPONSE REGULATOR receiver
FOC90_04090	COG0277	FAD linked oxidase domain protein
FOC90_04100	COG1136	(ABC) transporter
FOC90_04135	COG2814	Major facilitator Superfamily
FOC90_04145	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FOC90_04165	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FOC90_04185	COG0577	efflux transmembrane transporter activity
FOC90_04205	COG5002	protein histidine kinase activity
FOC90_04205	COG3850	Histidine kinase
FOC90_04215	COG2364	Membrane
FOC90_04220	COG1846	Transcriptional regulator
FOC90_04225	COG0456	acetyltransferase
FOC90_04230	COG2808	Putative FMN-binding domain
FOC90_04235	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_04260	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC90_04280	COG0662	Cupin 2, conserved barrel domain protein
FOC90_04285	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC90_04285	COG2207	Transcriptional regulator
FOC90_04300	COG3409	Peptidoglycan-binding domain 1 protein
FOC90_04300	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC90_04315	COG2814	Major facilitator Superfamily
FOC90_04370	COG4282	regulation of fungal-type cell wall biogenesis
FOC90_04415	COG5444	nuclease activity
FOC90_04440	COG1876	peptidase activity
FOC90_04445	COG2843	Capsule synthesis protein
FOC90_04455	COG0477	Major facilitator Superfamily
FOC90_04470	COG1846	Transcriptional regulator
FOC90_04475	COG2814	Major facilitator Superfamily
FOC90_04485	COG2031	fatty acid transporter
FOC90_04500	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC90_04550	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC90_04555	COG1288	antiporter activity
FOC90_04560	COG2356	endonuclease I
FOC90_04570	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC90_04575	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOC90_04595	COG1733	regulation of RNA biosynthetic process
FOC90_04600	COG0778	Nitroreductase
FOC90_04630	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_04640	COG1131	(ABC) transporter
FOC90_04665	COG1011	Hydrolase
FOC90_04685	COG1051	belongs to the nudix hydrolase family
FOC90_04695	COG0346	lactoylglutathione lyase activity
FOC90_04700	COG1940	carbohydrate kinase activity
FOC90_04705	COG0738	Major facilitator superfamily
FOC90_04710	COG0110	maltose O-acetyltransferase activity
FOC90_04720	COG1136	(ABC) transporter
FOC90_04740	COG0628	permease
FOC90_04770	COG0500	methyltransferase
FOC90_04780	COG0477	Major facilitator Superfamily
FOC90_04810	COG1253	flavin adenine dinucleotide binding
FOC90_04815	COG0789	Transcriptional regulator
FOC90_04820	COG0697	spore germination
FOC90_04835	COG1357	PFAM Pentapeptide repeats (8 copies)
FOC90_04840	COG3813	Protein conserved in bacteria
FOC90_04845	COG2706	6-phosphogluconolactonase activity
FOC90_04850	COG1070	Carbohydrate kinase
FOC90_04855	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOC90_04860	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FOC90_04865	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FOC90_04870	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOC90_04890	COG0814	amino acid
FOC90_04920	COG1733	regulation of RNA biosynthetic process
FOC90_04925	COG2188	Transcriptional regulator
FOC90_04930	COG0673	inositol 2-dehydrogenase activity
FOC90_04950	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_04975	COG0384	phenazine biosynthesis protein PhzF
FOC90_04985	COG0318	PFAM AMP-dependent synthetase and ligase
FOC90_04990	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC90_04995	COG1733	regulation of RNA biosynthetic process
FOC90_05000	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC90_05025	COG1191	sigma factor activity
FOC90_05070	COG1151	hydroxylamine reductase activity
FOC90_05105	COG2072	flavoprotein involved in K transport
FOC90_05135	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_05140	COG0604	alcohol dehydrogenase
FOC90_05145	COG1113	amino acid transport
FOC90_05150	COG2814	Major facilitator Superfamily
FOC90_05180	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC90_05185	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC90_05195	COG1247	-acetyltransferase
FOC90_05200	COG3739	integral membrane protein
FOC90_05230	COG0583	DNA-binding transcription factor activity
FOC90_05250	COG1193	negative regulation of DNA recombination
FOC90_05265	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FOC90_05270	COG1164	Oligoendopeptidase f
FOC90_05305	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC90_05330	COG0584	glycerophosphoryl diester phosphodiesterase
FOC90_05340	COG0640	Transcriptional regulator
FOC90_05345	COG0604	alcohol dehydrogenase
FOC90_05355	COG0457	Tetratricopeptide repeat
FOC90_05365	COG0385	Bile acid
FOC90_05370	COG0277	FAD linked oxidase domain protein
FOC90_05390	COG1252	NADH dehydrogenase
FOC90_05405	COG4641	Protein conserved in bacteria
FOC90_05415	COG2089	acid synthase
FOC90_05430	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FOC90_05435	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC90_05440	COG1088	dTDP-glucose 4,6-dehydratase activity
FOC90_05450	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
FOC90_05455	COG0463	Glycosyl transferase, family 2
FOC90_05460	COG0463	Glycosyl transferase, family 2
FOC90_05470	COG0823	Involved in the tonB-independent uptake of proteins
FOC90_05475	COG3397	chitin binding
FOC90_05485	COG0697	spore germination
FOC90_05505	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FOC90_05525	COG0457	Tetratricopeptide repeat
FOC90_05580	COG1309	transcriptional regulator
FOC90_05595	COG1876	peptidase activity
FOC90_05620	COG3852	Histidine kinase
FOC90_05630	COG1285	pathogenesis
FOC90_05640	COG2514	catechol 2,3-dioxygenase activity
FOC90_05645	COG2720	vancomycin resistance protein
FOC90_05685	COG0716	FMN binding
FOC90_05695	COG1051	belongs to the nudix hydrolase family
FOC90_05715	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_05725	COG0165	Argininosuccinate lyase
FOC90_05740	COG4145	pantothenate transmembrane transporter activity
FOC90_05750	COG1012	belongs to the aldehyde dehydrogenase family
FOC90_05755	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_05765	COG1657	PFAM Prenyltransferase squalene oxidase
FOC90_05770	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
FOC90_05775	COG2962	Rard protein
FOC90_05780	COG3326	Membrane
FOC90_05795	COG0489	protein tyrosine kinase activity
FOC90_05805	COG0314	molybdopterin synthase activity
FOC90_05810	COG0303	'Molybdopterin
FOC90_05815	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC90_05820	COG2116	formate transmembrane transporter activity
FOC90_05830	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC90_05835	COG5609	conserved protein (DUF2294)
FOC90_05840	COG2427	Protein of unknown function (DUF1641)
FOC90_05885	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC90_05885	COG3409	Peptidoglycan-binding domain 1 protein
FOC90_05885	COG1388	LysM domain
FOC90_05985	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOC90_06010	COG3617	BRO family, N-terminal domain
FOC90_06055	COG1484	DNA-dependent DNA replication
FOC90_06065	COG3723	Recombinational DNA repair protein, rece pathway
FOC90_06070	COG5377	YqaJ viral recombinase family
FOC90_06130	COG3383	formate dehydrogenase (NAD+) activity
FOC90_06180	COG2226	methyltransferase
FOC90_06185	COG4166	transmembrane transport
FOC90_06190	COG4166	transmembrane transport
FOC90_06205	COG1301	dicarboxylic acid transport
FOC90_06210	COG1316	TRANSCRIPTIONal
FOC90_06220	COG1595	DNA-templated transcription, initiation
FOC90_06230	COG1131	(ABC) transporter
FOC90_06250	COG0673	inositol 2-dehydrogenase activity
FOC90_06255	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC90_06260	COG0187	DNA topoisomerase II activity
FOC90_06265	COG1832	CoA-binding protein
FOC90_06270	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC90_06275	COG0745	RESPONSE REGULATOR receiver
FOC90_06295	COG4841	protein insertion into membrane
FOC90_06300	COG0824	Thioesterase
FOC90_06325	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC90_06335	COG1122	ATPase activity
FOC90_06340	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC90_06370	COG2211	Major facilitator Superfamily
FOC90_06380	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC90_06395	COG0183	Belongs to the thiolase family
FOC90_06400	COG0318	PFAM AMP-dependent synthetase and ligase
FOC90_06405	COG1268	BioY protein
FOC90_06410	COG0318	PFAM AMP-dependent synthetase and ligase
FOC90_06415	COG1396	sequence-specific DNA binding
FOC90_06450	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_06460	COG5002	protein histidine kinase activity
FOC90_06465	COG0400	carboxylic ester hydrolase activity
FOC90_06470	COG0346	lactoylglutathione lyase activity
FOC90_06475	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC90_06485	COG0069	glutamate synthase activity
FOC90_06490	COG1902	pentaerythritol trinitrate reductase activity
FOC90_06495	COG1329	Transcriptional regulator
FOC90_06500	COG0010	Belongs to the arginase family
FOC90_06550	COG4846	Membrane protein involved in cytochrome C biogenesis
FOC90_06555	COG0785	Cytochrome C biogenesis protein
FOC90_06565	COG1473	amidohydrolase
FOC90_06575	COG1131	(ABC) transporter
FOC90_06595	COG0583	DNA-binding transcription factor activity
FOC90_06605	COG1346	cytolysis
FOC90_06620	COG0730	response to heat
FOC90_06645	COG1132	(ABC) transporter
FOC90_06650	COG1132	(ABC) transporter
FOC90_06685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC90_06690	COG0737	Belongs to the 5'-nucleotidase family
FOC90_06700	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOC90_06720	COG1695	Transcriptional regulator
FOC90_06730	COG0741	lytic transglycosylase activity
FOC90_06730	COG0739	heme binding
FOC90_06730	COG1196	nuclear chromosome segregation
FOC90_06735	COG0741	lytic transglycosylase activity
FOC90_06770	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOC90_06775	COG0174	glutamine synthetase
FOC90_06780	COG0789	Transcriptional regulator
FOC90_06785	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
FOC90_06790	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOC90_06795	COG2860	membrane
FOC90_06805	COG0464	growth
FOC90_06835	COG1388	LysM domain
FOC90_06835	COG3584	3D domain protein
FOC90_06840	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC90_06840	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC90_06840	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOC90_06845	COG1105	Belongs to the carbohydrate kinase PfkB family
FOC90_06850	COG1349	DNA-binding transcription factor activity
FOC90_06855	COG1979	alcohol dehydrogenase
FOC90_06860	COG2322	membrane
FOC90_06870	COG1113	amino acid transport
FOC90_06885	COG1408	metallophosphoesterase
FOC90_06890	COG2116	formate transmembrane transporter activity
FOC90_06905	COG2217	Heavy metal translocating P-type atpase
FOC90_06910	COG2608	mercury ion transmembrane transporter activity
FOC90_06915	COG1937	Protein conserved in bacteria
FOC90_06935	COG2819	hydrolase of the alpha beta superfamily
FOC90_06940	COG1120	ATPase activity
FOC90_06945	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC90_06950	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC90_06955	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC90_06960	COG0708	Exodeoxyribonuclease III
FOC90_06965	COG2169	Transcriptional regulator
FOC90_06970	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC90_06975	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC90_06985	COG2364	Membrane
FOC90_07000	COG2267	carboxylic ester hydrolase activity
FOC90_07005	COG3300	MHYT domain
FOC90_07005	COG5001	Diguanylate cyclase
FOC90_07040	COG1346	cytolysis
FOC90_07050	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_07060	COG0840	transmembrane signaling receptor activity
FOC90_07070	COG1404	Belongs to the peptidase S8 family
FOC90_07075	COG3773	Cell wall hydrolase
FOC90_07085	COG1368	sulfuric ester hydrolase activity
FOC90_07090	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC90_07115	COG4550	Control of competence regulator ComK, YlbF/YmcA
FOC90_07125	COG1013	pyruvate-flavodoxin oxidoreductase activity
FOC90_07130	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FOC90_07130	COG0674	pyruvate-flavodoxin oxidoreductase activity
FOC90_07140	COG2359	stage V sporulation protein S
FOC90_07145	COG1692	metallophosphoesterase
FOC90_07165	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOC90_07170	COG1426	Protein conserved in bacteria
FOC90_07185	COG0300	oxidoreductase activity
FOC90_07190	COG0612	Peptidase, M16
FOC90_07195	COG0612	Peptidase, M16
FOC90_07220	COG2188	Transcriptional regulator
FOC90_07235	COG0740	serine-type endopeptidase activity
FOC90_07240	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC90_07250	COG0527	aspartate kinase activity
FOC90_07255	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC90_07260	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC90_07380	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
FOC90_07385	COG1278	Cold shock
FOC90_07390	COG0582	viral genome integration into host DNA
FOC90_07425	COG0305	Participates in initiation and elongation during chromosome replication
FOC90_07470	COG1396	sequence-specific DNA binding
FOC90_07495	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC90_07500	COG1873	PFAM PRC-barrel domain
FOC90_07505	COG0612	Peptidase, M16
FOC90_07510	COG0726	polysaccharide deacetylase
FOC90_07525	COG0196	riboflavin kinase activity
FOC90_07535	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FOC90_07540	COG1550	Protein conserved in bacteria
FOC90_07550	COG1358	cellular component organization or biogenesis
FOC90_07555	COG2740	Nucleic-acid-binding protein implicated in transcription termination
FOC90_07560	COG0195	Participates in both transcription termination and antitermination
FOC90_07580	COG0750	zinc metalloprotease
FOC90_07590	COG4589	Belongs to the CDS family
FOC90_07635	COG4974	Belongs to the 'phage' integrase family
FOC90_07645	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC90_07650	COG0758	DNA mediated transformation
FOC90_07655	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOC90_07695	COG1837	Belongs to the UPF0109 family
FOC90_07705	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOC90_07715	COG0552	protein localization to endoplasmic reticulum
FOC90_07720	COG1196	nuclear chromosome segregation
FOC90_07730	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC90_07735	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_07740	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FOC90_07755	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOC90_07760	COG1461	Dihydroxyacetone kinase
FOC90_07765	COG1302	Protein conserved in bacteria
FOC90_07780	COG1564	THIamine pyrophosphokinase
FOC90_07785	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOC90_07795	COG2815	serine threonine protein kinase
FOC90_07795	COG0515	serine threonine protein kinase
FOC90_07800	COG0631	protein serine/threonine phosphatase activity
FOC90_07810	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC90_07810	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC90_07825	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOC90_07830	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC90_07850	COG1561	YicC-like family, N-terminal region
FOC90_07855	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOC90_07865	COG0006	proline dipeptidase activity
FOC90_07885	COG3069	C4-dicarboxylate transmembrane transporter activity
FOC90_07945	COG0564	pseudouridine synthase activity
FOC90_07965	COG3599	regulation of cell shape
FOC90_07970	COG2302	S4 RNA-binding domain
FOC90_07975	COG0762	integral membrane protein
FOC90_07985	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOC90_07995	COG1873	PFAM PRC-barrel domain
FOC90_08000	COG1191	sigma factor activity
FOC90_08005	COG1191	sigma factor activity
FOC90_08015	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOC90_08020	COG0849	cell division
FOC90_08040	COG0772	Belongs to the SEDS family
FOC90_08060	COG0768	penicillin binding
FOC90_08085	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC90_08100	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOC90_08105	COG1399	metal-binding, possibly nucleic acid-binding protein
FOC90_08115	COG3480	Lon protease (S16) C-terminal proteolytic domain
FOC90_08120	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC90_08125	COG3314	Sporulation integral membrane protein YlbJ
FOC90_08135	COG0742	ribosomal rna small subunit methyltransferase
FOC90_08150	COG3679	Belongs to the UPF0342 family
FOC90_08155	COG0406	alpha-ribazole phosphatase activity
FOC90_08170	COG2340	Cysteine-rich secretory protein family
FOC90_08185	COG3336	cytochrome c oxidase
FOC90_08220	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FOC90_08225	COG0772	Belongs to the SEDS family
FOC90_08235	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC90_08240	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FOC90_08250	COG4896	Protein conserved in bacteria
FOC90_08275	COG0483	inositol monophosphate 1-phosphatase activity
FOC90_08295	COG1982	Orn Lys Arg decarboxylase major
FOC90_08345	COG0022	dehydrogenase e1 component
FOC90_08350	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC90_08365	COG0561	phosphatase activity
FOC90_08375	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FOC90_08380	COG0569	domain protein
FOC90_08400	COG0583	DNA-binding transcription factor activity
FOC90_08405	COG0517	IMP dehydrogenase activity
FOC90_08415	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
FOC90_08425	COG4703	Protein of unknown function (DUF1797)
FOC90_08440	COG2200	EAL domain
FOC90_08445	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_08450	COG1408	metallophosphoesterase
FOC90_08495	COG2814	Major facilitator Superfamily
FOC90_08515	COG3209	COG3209 Rhs family protein
FOC90_08525	COG2205	protein histidine kinase activity
FOC90_08535	COG0436	Aminotransferase
FOC90_08540	COG1609	Transcriptional regulator
FOC90_08545	COG3833	ABC-type maltose transport systems, permease component
FOC90_08550	COG1175	transmembrane transport
FOC90_08555	COG2182	Extracellular solute-binding protein
FOC90_08565	COG0366	Alpha amylase catalytic
FOC90_08570	COG3842	ATPase activity
FOC90_08610	COG0183	Belongs to the thiolase family
FOC90_08645	COG1695	Transcriptional regulator
FOC90_08650	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_08670	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC90_08675	COG0436	Aminotransferase
FOC90_08710	COG2084	Dehydrogenase
FOC90_08720	COG2203	Gaf domain
FOC90_08720	COG2199	diguanylate cyclase activity
FOC90_08725	COG0778	Nitroreductase
FOC90_08750	COG1263	PTS System
FOC90_08750	COG2190	(PTS) system
FOC90_08750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC90_08755	COG3711	transcriptional antiterminator
FOC90_08765	COG2188	Transcriptional regulator
FOC90_08775	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOC90_08800	COG1547	Domain of unknown function (DUF309)
FOC90_08805	COG0456	acetyltransferase
FOC90_08810	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOC90_08815	COG4086	secreted protein
FOC90_08820	COG0561	phosphatase activity
FOC90_08825	COG0697	spore germination
FOC90_08840	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC90_08865	COG0733	neurotransmitter:sodium symporter activity
FOC90_08885	COG1686	Belongs to the peptidase S11 family
FOC90_08890	COG1725	Transcriptional regulator
FOC90_08895	COG1131	(ABC) transporter
FOC90_08915	COG1846	Transcriptional regulator
FOC90_08930	COG0598	Magnesium transport protein CorA
FOC90_08955	COG4974	Belongs to the 'phage' integrase family
FOC90_08965	COG0735	belongs to the Fur family
FOC90_08970	COG1300	Membrane
FOC90_08990	COG0667	Aldo Keto reductase
FOC90_08995	COG0656	L-ascorbic acid biosynthetic process
FOC90_09000	COG0456	acetyltransferase
FOC90_09000	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC90_09010	COG0737	Belongs to the 5'-nucleotidase family
FOC90_09010	COG1525	nuclease
FOC90_09010	COG4085	toxin activity
FOC90_09020	COG0596	Alpha beta hydrolase
FOC90_09025	COG2056	Na+-H+ antiporter family
FOC90_09030	COG1609	Transcriptional regulator
FOC90_09035	COG0456	acetyltransferase
FOC90_09040	COG1073	alpha beta
FOC90_09055	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC90_09055	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC90_09060	COG0307	riboflavin synthase, alpha
FOC90_09090	COG2226	methyltransferase
FOC90_09090	COG1073	alpha beta
FOC90_09105	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC90_09120	COG0737	Belongs to the 5'-nucleotidase family
FOC90_09130	COG1522	sequence-specific DNA binding
FOC90_09175	COG0300	oxidoreductase activity
FOC90_09180	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_09185	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC90_09190	COG1760	l-serine dehydratase
FOC90_09195	COG1760	l-serine dehydratase
FOC90_09225	COG1285	pathogenesis
FOC90_09240	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC90_09245	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_09260	COG1376	ErfK ybiS ycfS ynhG family protein
FOC90_09265	COG4129	membrane
FOC90_09270	COG1126	abc transporter atp-binding protein
FOC90_09275	COG0765	amino acid transport
FOC90_09280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC90_09300	COG2323	membrane
FOC90_09305	COG0772	Belongs to the SEDS family
FOC90_09310	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC90_09315	COG0022	dehydrogenase e1 component
FOC90_09320	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC90_09325	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC90_09340	COG0280	phosphate acetyltransferase
FOC90_09345	COG3829	transcription factor binding
FOC90_09345	COG3290	protein histidine kinase activity
FOC90_09355	COG0584	glycerophosphoryl diester phosphodiesterase
FOC90_09360	COG3093	addiction module antidote protein HigA
FOC90_09405	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOC90_09445	COG0750	zinc metalloprotease
FOC90_09450	COG0497	DNA recombination
FOC90_09460	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FOC90_09470	COG0142	geranyltranstransferase activity
FOC90_09495	COG1302	Protein conserved in bacteria
FOC90_09500	COG0439	Biotin carboxylase
FOC90_09505	COG0511	ligase activity, forming carbon-carbon bonds
FOC90_09550	COG3854	ATPases associated with a variety of cellular activities
FOC90_09575	COG0006	proline dipeptidase activity
FOC90_09590	COG3872	metal-dependent enzyme
FOC90_09600	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC90_09635	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC90_09645	COG1609	Transcriptional regulator
FOC90_09655	COG2076	Multidrug Resistance protein
FOC90_09660	COG2076	Multidrug Resistance protein
FOC90_09700	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC90_09730	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOC90_09765	COG1459	type II secretion system
FOC90_09770	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOC90_09825	COG1410	methionine synthase
FOC90_09825	COG0646	methionine synthase
FOC90_09830	COG0646	methionine synthase
FOC90_09830	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FOC90_09835	COG0626	cystathionine gamma-synthase activity
FOC90_09840	COG0626	cystathionine gamma-synthase activity
FOC90_09860	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_09870	COG1940	carbohydrate kinase activity
FOC90_09875	COG4483	Protein conserved in bacteria
FOC90_09880	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOC90_09885	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOC90_09890	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FOC90_09895	COG0704	Plays a role in the regulation of phosphate uptake
FOC90_09905	COG0573	inorganic phosphate transmembrane transporter activity
FOC90_09910	COG0573	inorganic phosphate transmembrane transporter activity
FOC90_09925	COG0477	Major facilitator Superfamily
FOC90_09930	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC90_09940	COG5521	maltodextrose utilization protein MalA
FOC90_09955	COG0735	belongs to the Fur family
FOC90_09960	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOC90_09965	COG1121	(ABC) transporter
FOC90_09970	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_10000	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC90_10005	COG2384	SAM-dependent methyltransferase
FOC90_10015	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOC90_10020	COG0358	DNA primase activity
FOC90_10025	COG1671	Belongs to the UPF0178 family
FOC90_10035	COG0517	IMP dehydrogenase activity
FOC90_10050	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOC90_10055	COG0295	cytidine deaminase activity
FOC90_10060	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOC90_10070	COG1480	7TM receptor with intracellular HD hydrolase
FOC90_10075	COG1702	phosphate starvation-inducible protein PhoH
FOC90_10095	COG1610	YqeY-like protein
FOC90_10100	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOC90_10105	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC90_10110	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOC90_10140	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC90_10145	COG1733	regulation of RNA biosynthetic process
FOC90_10170	COG1466	dna polymerase III delta subunit
FOC90_10180	COG0658	competence protein
FOC90_10180	COG2333	competence protein COMEC
FOC90_10185	COG2131	deaminase
FOC90_10190	COG1555	photosystem II stabilization
FOC90_10190	COG1596	polysaccharide export
FOC90_10195	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC90_10200	COG2226	methyltransferase
FOC90_10205	COG0799	negative regulation of ribosome biogenesis
FOC90_10210	COG1713	HD superfamily hydrolase involved in NAD metabolism
FOC90_10220	COG1534	Rna-binding protein
FOC90_10230	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FOC90_10235	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
FOC90_10260	COG1595	DNA-templated transcription, initiation
FOC90_10270	COG0778	Nitroreductase
FOC90_10275	COG2357	RelA SpoT domain protein
FOC90_10285	COG1785	Belongs to the alkaline phosphatase family
FOC90_10295	COG2267	carboxylic ester hydrolase activity
FOC90_10330	COG1404	Belongs to the peptidase S8 family
FOC90_10335	COG3186	Phenylalanine-4-hydroxylase
FOC90_10345	COG2514	catechol 2,3-dioxygenase activity
FOC90_10350	COG2259	Doxx family
FOC90_10390	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC90_10400	COG1454	alcohol dehydrogenase
FOC90_10400	COG1012	belongs to the aldehyde dehydrogenase family
FOC90_10405	COG0626	cystathionine gamma-synthase activity
FOC90_10410	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC90_10435	COG0768	penicillin binding
FOC90_10465	COG4122	O-methyltransferase activity
FOC90_10470	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOC90_10485	COG4472	Bacterial protein of unknown function (DUF965)
FOC90_10500	COG0628	permease
FOC90_10520	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOC90_10535	COG1104	cysteine desulfurase activity
FOC90_10540	COG1959	2 iron, 2 sulfur cluster binding
FOC90_10545	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOC90_10555	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOC90_10585	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC90_10595	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
FOC90_10595	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOC90_10600	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC90_10605	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC90_10605	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC90_10615	COG2244	polysaccharide biosynthetic process
FOC90_10620	COG2323	membrane
FOC90_10630	COG1862	Preprotein translocase
FOC90_10660	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FOC90_10690	COG0157	Belongs to the NadC ModD family
FOC90_10695	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOC90_10700	COG1104	cysteine desulfurase activity
FOC90_10705	COG1827	regulation of RNA biosynthetic process
FOC90_10710	COG2258	MOSC domain
FOC90_10720	COG0077	Prephenate dehydratase
FOC90_10725	COG0577	efflux transmembrane transporter activity
FOC90_10730	COG0577	efflux transmembrane transporter activity
FOC90_10735	COG1136	(ABC) transporter
FOC90_10740	COG5002	protein histidine kinase activity
FOC90_10745	COG0745	RESPONSE REGULATOR receiver
FOC90_10755	COG3290	protein histidine kinase activity
FOC90_10765	COG2868	ribosomal protein
FOC90_10775	COG1530	ribonuclease E activity
FOC90_10780	COG1994	Peptidase M50
FOC90_10785	COG0739	heme binding
FOC90_10790	COG2894	cell division
FOC90_10810	COG1077	Cell shape determining protein MreB Mrl
FOC90_10830	COG0285	dihydrofolate synthase activity
FOC90_10845	COG1388	LysM domain
FOC90_10855	COG0113	porphobilinogen synthase activity
FOC90_10860	COG1587	Uroporphyrinogen-III synthase
FOC90_10870	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC90_10880	COG1846	Transcriptional regulator
FOC90_10885	COG1764	response to oxidative stress
FOC90_10900	COG1067	ATP-dependent peptidase activity
FOC90_10900	COG0470	DNA polymerase III
FOC90_10950	COG0622	Phosphoesterase
FOC90_10965	COG5401	PFAM Sporulation and spore germination
FOC90_10985	COG1309	transcriptional regulator
FOC90_10995	COG2197	response regulator
FOC90_11000	COG2233	PERMEase
FOC90_11005	COG0402	S-adenosylhomocysteine deaminase activity
FOC90_11010	COG1983	PspC domain protein
FOC90_11015	COG1396	sequence-specific DNA binding
FOC90_11020	COG0697	spore germination
FOC90_11030	COG1959	2 iron, 2 sulfur cluster binding
FOC90_11035	COG1668	transmembrane transport
FOC90_11040	COG4152	abc transporter atp-binding protein
FOC90_11045	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
FOC90_11050	COG1360	Flagellar Motor Protein
FOC90_11055	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC90_11060	COG1876	peptidase activity
FOC90_11065	COG0824	Thioesterase
FOC90_11070	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOC90_11075	COG1053	succinate dehydrogenase
FOC90_11080	COG2009	succinate dehydrogenase
FOC90_11085	COG1719	4-vinyl reductase, 4VR
FOC90_11095	COG3118	belongs to the thioredoxin family
FOC90_11100	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FOC90_11105	COG2086	electron transfer activity
FOC90_11110	COG1024	Enoyl-CoA hydratase
FOC90_11115	COG1309	transcriptional regulator
FOC90_11120	COG0318	PFAM AMP-dependent synthetase and ligase
FOC90_11145	COG2318	DinB family
FOC90_11165	COG1131	(ABC) transporter
FOC90_11170	COG2205	protein histidine kinase activity
FOC90_11175	COG0745	RESPONSE REGULATOR receiver
FOC90_11185	COG4895	conserved protein (DUF2196)
FOC90_11190	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOC90_11200	COG4509	Sortase family
FOC90_11205	COG1120	ATPase activity
FOC90_11220	COG5386	Cell surface protein
FOC90_11230	COG5386	Cell surface protein
FOC90_11235	COG1114	Component of the transport system for branched-chain amino acids
FOC90_11240	COG1187	pseudouridine synthase activity
FOC90_11250	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC90_11250	COG1796	DNA polymerase
FOC90_11255	COG1286	toxin biosynthetic process
FOC90_11295	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC90_11305	COG1418	mRNA catabolic process
FOC90_11320	COG2814	Major facilitator Superfamily
FOC90_11325	COG1566	PFAM secretion protein HlyD family protein
FOC90_11330	COG1309	transcriptional regulator
FOC90_11335	COG1363	Peptidase, m42
FOC90_11360	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC90_11375	COG1484	DNA-dependent DNA replication
FOC90_11380	COG3611	Membrane attachment protein
FOC90_11390	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC90_11395	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC90_11400	COG0237	dephospho-CoA kinase activity
FOC90_11405	COG1971	Probably functions as a manganese efflux pump
FOC90_11415	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC90_11415	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC90_11420	COG5002	protein histidine kinase activity
FOC90_11425	COG0745	RESPONSE REGULATOR receiver
FOC90_11445	COG0538	isocitrate dehydrogenase activity
FOC90_11450	COG0372	Belongs to the citrate synthase family
FOC90_11460	COG0628	permease
FOC90_11465	COG3030	protein affecting phage T7 exclusion by the F plasmid
FOC90_11490	COG1725	Transcriptional regulator
FOC90_11495	COG0281	malic enzyme
FOC90_11500	COG0587	DNA-directed DNA polymerase activity
FOC90_11515	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FOC90_11530	COG4109	DRTGG domain
FOC90_11545	COG0006	proline dipeptidase activity
FOC90_11580	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_11585	COG0662	Cupin 2, conserved barrel domain protein
FOC90_11600	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_11605	COG0589	response to stress
FOC90_11645	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_11670	COG0827	DNA restriction-modification system
FOC90_11675	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FOC90_11680	COG3874	Sporulation protein YtfJ
FOC90_11695	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FOC90_11705	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC90_11720	COG1104	cysteine desulfurase activity
FOC90_11730	COG0583	DNA-binding transcription factor activity
FOC90_11735	COG0697	spore germination
FOC90_11740	COG1309	transcriptional regulator
FOC90_11745	COG1956	GAF domain-containing protein
FOC90_11750	COG0626	cystathionine gamma-synthase activity
FOC90_11775	COG0110	maltose O-acetyltransferase activity
FOC90_11780	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC90_11785	COG0454	-acetyltransferase
FOC90_11790	COG0517	IMP dehydrogenase activity
FOC90_11795	COG0123	including yeast histone deacetylase and acetoin utilization protein
FOC90_11810	COG0745	RESPONSE REGULATOR receiver
FOC90_11815	COG5002	protein histidine kinase activity
FOC90_11820	COG0666	response to abiotic stimulus
FOC90_11855	COG1609	Transcriptional regulator
FOC90_11865	COG1605	Chorismate mutase
FOC90_11865	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FOC90_11870	COG1605	Chorismate mutase
FOC90_11870	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FOC90_11875	COG4851	CamS sex pheromone cAM373 precursor
FOC90_11880	COG3118	belongs to the thioredoxin family
FOC90_11890	COG2309	aminopeptidase activity
FOC90_11905	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_11910	COG0697	spore germination
FOC90_11915	COG0789	Transcriptional regulator
FOC90_11930	COG1674	ftsk spoiiie
FOC90_11945	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC90_11955	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC90_11960	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FOC90_11965	COG1363	Peptidase, m42
FOC90_11975	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_11990	COG0510	thiamine kinase activity
FOC90_11995	COG1523	belongs to the glycosyl hydrolase 13 family
FOC90_12005	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC90_12010	COG1349	DNA-binding transcription factor activity
FOC90_12015	COG1187	pseudouridine synthase activity
FOC90_12020	COG2244	polysaccharide biosynthetic process
FOC90_12025	COG2081	HI0933 family
FOC90_12030	COG2814	Major facilitator Superfamily
FOC90_12040	COG3832	glyoxalase III activity
FOC90_12060	COG1329	Transcriptional regulator
FOC90_12085	COG0314	molybdopterin synthase activity
FOC90_12090	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOC90_12095	COG0303	'Molybdopterin
FOC90_12105	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC90_12110	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC90_12130	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC90_12140	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC90_12180	COG2814	Major facilitator Superfamily
FOC90_12185	COG0475	glutathione-regulated potassium exporter activity
FOC90_12190	COG0490	domain, Protein
FOC90_12195	COG0582	viral genome integration into host DNA
FOC90_12205	COG1136	(ABC) transporter
FOC90_12225	COG1242	4 iron, 4 sulfur cluster binding
FOC90_12230	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FOC90_12235	COG1794	racemase activity, acting on amino acids and derivatives
FOC90_12250	COG2267	carboxylic ester hydrolase activity
FOC90_12255	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOC90_12260	COG0671	phosphoesterase, PA-phosphatase related
FOC90_12265	COG0438	transferase activity, transferring glycosyl groups
FOC90_12360	COG5002	protein histidine kinase activity
FOC90_12365	COG3852	Histidine kinase
FOC90_12375	COG2267	carboxylic ester hydrolase activity
FOC90_12380	COG1368	sulfuric ester hydrolase activity
FOC90_12405	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC90_12410	COG1116	anion transmembrane transporter activity
FOC90_12415	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC90_12440	COG0494	nUDIX hydrolase
FOC90_12470	COG2076	Multidrug Resistance protein
FOC90_12475	COG2076	Multidrug Resistance protein
FOC90_12480	COG0789	Transcriptional regulator
FOC90_12485	COG1854	S-ribosylhomocysteine lyase activity
FOC90_12495	COG0288	reversible hydration of carbon dioxide
FOC90_12500	COG1271	oxidase subunit
FOC90_12505	COG1294	oxidase, subunit
FOC90_12525	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_12550	COG1842	Phage shock protein A
FOC90_12575	COG3859	Proton-coupled thiamine transporter YuaJ
FOC90_12580	COG5002	protein histidine kinase activity
FOC90_12585	COG0745	RESPONSE REGULATOR receiver
FOC90_12615	COG1597	lipid kinase activity
FOC90_12665	COG5002	protein histidine kinase activity
FOC90_12675	COG0586	Pfam SNARE associated Golgi protein
FOC90_12685	COG0577	efflux transmembrane transporter activity
FOC90_12690	COG1136	(ABC) transporter
FOC90_12695	COG2207	Transcriptional regulator
FOC90_12695	COG3708	Transcriptional regulator
FOC90_12705	COG1131	(ABC) transporter
FOC90_12710	COG5658	integral membrane protein
FOC90_12715	COG0640	Transcriptional regulator
FOC90_12725	COG0745	RESPONSE REGULATOR receiver
FOC90_12730	COG2205	protein histidine kinase activity
FOC90_12735	COG0577	efflux transmembrane transporter activity
FOC90_12740	COG0577	efflux transmembrane transporter activity
FOC90_12745	COG1136	(ABC) transporter
FOC90_12750	COG0577	efflux transmembrane transporter activity
FOC90_12765	COG2188	Transcriptional regulator
FOC90_12785	COG3964	amidohydrolase
FOC90_12805	COG4948	Mandelate Racemase Muconate Lactonizing
FOC90_12815	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC90_12820	COG0596	Alpha beta hydrolase
FOC90_12830	COG1169	isochorismate synthase
FOC90_12835	COG1575	Belongs to the MenA family. Type 1 subfamily
FOC90_12840	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOC90_12845	COG1278	Cold shock
FOC90_12870	COG0058	SHG alpha-glucan phosphorylase activity
FOC90_12880	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOC90_12885	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOC90_12910	COG1309	transcriptional regulator
FOC90_13045	COG1285	pathogenesis
FOC90_13050	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC90_13065	COG2155	Conserved Protein
FOC90_13070	COG1098	S1 RNA binding domain
FOC90_13075	COG0436	Aminotransferase
FOC90_13080	COG1522	sequence-specific DNA binding
FOC90_13085	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC90_13090	COG2267	carboxylic ester hydrolase activity
FOC90_13100	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOC90_13120	COG5018	Exonuclease
FOC90_13125	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC90_13145	COG2050	protein possibly involved in aromatic compounds catabolism
FOC90_13155	COG1268	BioY protein
FOC90_13160	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC90_13165	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOC90_13180	COG3584	3D domain protein
FOC90_13195	COG1252	NADH dehydrogenase
FOC90_13205	COG3708	Transcriptional regulator
FOC90_13220	COG1683	Conserved Protein
FOC90_13250	COG0316	Belongs to the HesB IscA family
FOC90_13265	COG1252	NADH dehydrogenase
FOC90_13275	COG2274	protein secretion by the type I secretion system
FOC90_13280	COG0390	transport system, permease component
FOC90_13285	COG2824	Alkylphosphonate utilization operon protein PhnA
FOC90_13330	COG4837	Protein of unknown function (DUF1462)
FOC90_13335	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FOC90_13345	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC90_13350	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FOC90_13370	COG1358	cellular component organization or biogenesis
FOC90_13380	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC90_13385	COG0647	UMP catabolic process
FOC90_13395	COG2445	Protein of unknown function DUF86
FOC90_13400	COG1494	fructose-1,6-bisphosphatase
FOC90_13415	COG4470	Protein conserved in bacteria
FOC90_13425	COG0789	Transcriptional regulator
FOC90_13430	COG4377	Putative membrane peptidase family (DUF2324)
FOC90_13455	COG0739	heme binding
FOC90_13465	COG3377	Domain of unknown function (DUF1805)
FOC90_13470	COG0737	Belongs to the 5'-nucleotidase family
FOC90_13475	COG0719	Fe-S assembly protein
FOC90_13480	COG0822	iron-sulfur transferase activity
FOC90_13485	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOC90_13490	COG0719	Fe-S assembly protein
FOC90_13495	COG0396	ATPase activity
FOC90_13500	COG1464	Belongs to the NlpA lipoprotein family
FOC90_13505	COG1464	Belongs to the NlpA lipoprotein family
FOC90_13510	COG2011	ABC-type metal ion transport system permease component
FOC90_13525	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC90_13530	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOC90_13540	COG1393	Belongs to the ArsC family
FOC90_13560	COG0039	L-malate dehydrogenase activity
FOC90_13575	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_13580	COG1960	acyl-CoA dehydrogenase activity
FOC90_13585	COG0183	Belongs to the thiolase family
FOC90_13590	COG1024	Enoyl-CoA hydratase
FOC90_13590	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC90_13600	COG1686	Belongs to the peptidase S11 family
FOC90_13615	COG0011	TIGRFAM Protein of
FOC90_13620	COG0840	transmembrane signaling receptor activity
FOC90_13635	COG2814	Major facilitator Superfamily
FOC90_13640	COG0531	amino acid
FOC90_13665	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_13700	COG0586	Pfam SNARE associated Golgi protein
FOC90_13710	COG1376	ErfK ybiS ycfS ynhG family protein
FOC90_13715	COG0745	RESPONSE REGULATOR receiver
FOC90_13720	COG5002	protein histidine kinase activity
FOC90_13750	COG0840	transmembrane signaling receptor activity
FOC90_13755	COG2151	metal-sulfur cluster biosynthetic enzyme
FOC90_13765	COG3227	Zinc metalloprotease (Elastase)
FOC90_13785	COG0586	Pfam SNARE associated Golgi protein
FOC90_13790	COG0475	glutathione-regulated potassium exporter activity
FOC90_13795	COG0490	domain, Protein
FOC90_13800	COG1115	amino acid carrier protein
FOC90_13805	COG0783	Belongs to the Dps family
FOC90_13820	COG1611	Belongs to the LOG family
FOC90_13830	COG1528	Iron-storage protein
FOC90_13840	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC90_13845	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC90_13850	COG1115	amino acid carrier protein
FOC90_13855	COG1115	amino acid carrier protein
FOC90_13860	COG2910	NAD(P)H-binding
FOC90_13875	COG0656	L-ascorbic acid biosynthetic process
FOC90_13880	COG2814	Major facilitator Superfamily
FOC90_13885	COG1733	regulation of RNA biosynthetic process
FOC90_13895	COG1252	NADH dehydrogenase
FOC90_13915	COG3290	protein histidine kinase activity
FOC90_13915	COG0840	transmembrane signaling receptor activity
FOC90_13950	COG0488	(ABC) transporter
FOC90_13955	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_13975	COG1335	isochorismatase
FOC90_13980	COG1522	sequence-specific DNA binding
FOC90_13990	COG1522	sequence-specific DNA binding
FOC90_13995	COG0288	reversible hydration of carbon dioxide
FOC90_14000	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
FOC90_14005	COG2233	PERMEase
FOC90_14050	COG0557	exoribonuclease II activity
FOC90_14055	COG1647	Serine aminopeptidase, S33
FOC90_14060	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC90_14065	COG1346	cytolysis
FOC90_14100	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC90_14115	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC90_14140	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC90_14155	COG2323	membrane
FOC90_14165	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC90_14175	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FOC90_14185	COG1051	belongs to the nudix hydrolase family
FOC90_14195	COG0492	ferredoxin-NADP+ reductase activity
FOC90_14200	COG0457	Tetratricopeptide repeat
FOC90_14205	COG0110	maltose O-acetyltransferase activity
FOC90_14225	COG1950	PFAM Membrane protein of
FOC90_14235	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC90_14255	COG0789	Transcriptional regulator
FOC90_14275	COG0583	DNA-binding transcription factor activity
FOC90_14285	COG0655	NAD(P)H dehydrogenase (quinone) activity
FOC90_14290	COG0488	(ABC) transporter
FOC90_14300	COG1132	(ABC) transporter
FOC90_14305	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC90_14310	COG3409	Peptidoglycan-binding domain 1 protein
FOC90_14310	COG0793	Belongs to the peptidase S41A family
FOC90_14315	COG2177	Part of the ABC transporter FtsEX involved in
FOC90_14320	COG2884	Cell division ATP-binding protein ftsE
FOC90_14340	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOC90_14345	COG1278	Cold shock
FOC90_14350	COG1040	competence protein
FOC90_14355	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
FOC90_14360	COG1388	LysM domain
FOC90_14360	COG0791	NLP P60 protein
FOC90_14365	COG1733	regulation of RNA biosynthetic process
FOC90_14370	COG1307	EDD domain protein, DegV family
FOC90_14375	COG1739	Uncharacterized protein family UPF0029
FOC90_14380	COG1316	TRANSCRIPTIONal
FOC90_14385	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC90_14390	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FOC90_14395	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC90_14405	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOC90_14405	COG3933	PFAM sigma-54 factor interaction domain-containing protein
FOC90_14425	COG1486	melibiose metabolic process
FOC90_14430	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC90_14435	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC90_14445	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC90_14455	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC90_14465	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC90_14470	COG1301	dicarboxylic acid transport
FOC90_14485	COG1511	domain protein
FOC90_14490	COG0583	DNA-binding transcription factor activity
FOC90_14505	COG1271	oxidase subunit
FOC90_14510	COG1294	oxidase, subunit
FOC90_14515	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC90_14525	COG1620	l-lactate permease
FOC90_14535	COG2389	metal-binding protein
FOC90_14545	COG1368	sulfuric ester hydrolase activity
FOC90_14555	COG0791	NLP P60 protein
FOC90_14555	COG1388	LysM domain
FOC90_14560	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC90_14570	COG1215	transferase activity, transferring glycosyl groups
FOC90_14575	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC90_14580	COG1388	LysM domain
FOC90_14580	COG3584	3D domain protein
FOC90_14605	COG4715	Zinc finger, swim domain protein
FOC90_14610	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC90_14650	COG0577	efflux transmembrane transporter activity
FOC90_14655	COG1136	(ABC) transporter
FOC90_14690	COG5002	protein histidine kinase activity
FOC90_14695	COG0745	RESPONSE REGULATOR receiver
FOC90_14705	COG1316	TRANSCRIPTIONal
FOC90_14710	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC90_14715	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FOC90_14720	COG1215	transferase activity, transferring glycosyl groups
FOC90_14725	COG0438	transferase activity, transferring glycosyl groups
FOC90_14745	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC90_14750	COG4464	protein tyrosine phosphatase activity
FOC90_14755	COG0489	protein tyrosine kinase activity
FOC90_14760	COG3944	biosynthesis protein
FOC90_14765	COG0489	protein tyrosine kinase activity
FOC90_14780	COG1609	Transcriptional regulator
FOC90_14790	COG0739	heme binding
FOC90_14805	COG3279	Response regulator of the LytR AlgR family
FOC90_14810	COG2385	sporulation resulting in formation of a cellular spore
FOC90_14825	COG4836	Membrane
FOC90_14830	COG1007	ATP synthesis coupled electron transport
FOC90_14835	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC90_14840	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC90_14850	COG0839	Belongs to the complex I subunit 6 family
FOC90_14870	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC90_14885	COG3300	MHYT domain
FOC90_14885	COG5001	Diguanylate cyclase
FOC90_14935	COG0356	it plays a direct role in the translocation of protons across the membrane
FOC90_14970	COG0698	ribose 5-phosphate isomerase
FOC90_14980	COG2190	(PTS) system
FOC90_14985	COG2259	Doxx family
FOC90_14990	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC90_15010	COG0009	L-threonylcarbamoyladenylate synthase
FOC90_15045	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOC90_15050	COG1494	fructose-1,6-bisphosphatase
FOC90_15070	COG4821	SIS domain
FOC90_15090	COG1960	acyl-CoA dehydrogenase activity
FOC90_15095	COG1960	acyl-CoA dehydrogenase activity
FOC90_15100	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC90_15105	COG0183	Belongs to the thiolase family
FOC90_15110	COG2181	nitrate reductase activity
FOC90_15110	COG0247	lactate metabolic process
FOC90_15115	COG3620	sequence-specific DNA binding
FOC90_15155	COG1404	Belongs to the peptidase S8 family
FOC90_15160	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOC90_15205	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC90_15215	COG5001	Diguanylate cyclase
FOC90_15215	COG3300	MHYT domain
FOC90_15230	COG3227	Zinc metalloprotease (Elastase)
FOC90_15235	COG2197	response regulator
FOC90_15240	COG4585	Histidine kinase
FOC90_15245	COG0842	Transport permease protein
FOC90_15250	COG1131	(ABC) transporter
FOC90_15255	COG0024	Methionine aminopeptidase
FOC90_15265	COG2234	aminopeptidase activity
FOC90_15285	COG1595	DNA-templated transcription, initiation
FOC90_15300	COG4506	Protein conserved in bacteria
FOC90_15305	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC90_15330	COG2814	Major facilitator Superfamily
FOC90_15335	COG0789	Transcriptional regulator
FOC90_15340	COG0584	glycerophosphoryl diester phosphodiesterase
FOC90_15345	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC90_15355	COG1994	Peptidase M50
FOC90_15365	COG1078	dGTPase activity
FOC90_15370	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC90_15375	COG1120	ATPase activity
FOC90_15380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC90_15385	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC90_15405	COG0280	phosphate acetyltransferase
FOC90_15420	COG3773	Cell wall hydrolase
FOC90_15430	COG2363	Small membrane protein
FOC90_15440	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC90_15445	COG2233	PERMEase
FOC90_15450	COG0561	phosphatase activity
FOC90_15455	COG2814	Major facilitator Superfamily
FOC90_15465	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC90_15470	COG1131	(ABC) transporter
FOC90_15475	COG2755	lipolytic protein G-D-S-L family
FOC90_15480	COG1609	Transcriptional regulator
FOC90_15490	COG0460	homoserine dehydrogenase
FOC90_15500	COG2873	o-acetylhomoserine
FOC90_15505	COG1011	Hydrolase
FOC90_15510	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC90_15520	COG2197	response regulator
FOC90_15525	COG4585	Histidine kinase
FOC90_15525	COG2203	Gaf domain
FOC90_15530	COG0351	phosphomethylpyrimidine kinase
FOC90_15535	COG3706	GGDEF domain
FOC90_15540	COG2879	small protein
FOC90_15545	COG1966	Carbon starvation protein
FOC90_15550	COG3279	Response regulator of the LytR AlgR family
FOC90_15555	COG0477	Major facilitator Superfamily
FOC90_15565	COG0438	transferase activity, transferring glycosyl groups
FOC90_15580	COG0840	transmembrane signaling receptor activity
FOC90_15590	COG1607	acyl-coa hydrolase
FOC90_15595	COG1216	Glycosyl transferase, family 2
FOC90_15610	COG1216	Glycosyl transferase, family 2
FOC90_15620	COG4485	Bacterial membrane protein, YfhO
FOC90_15625	COG0463	Glycosyl transferase, family 2
FOC90_15635	COG1309	transcriptional regulator
FOC90_15640	COG0488	(ABC) transporter
FOC90_15645	COG1309	transcriptional regulator
FOC90_15650	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC90_15655	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC90_15655	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC90_15660	COG0628	permease
FOC90_15680	COG3275	phosphorelay sensor kinase activity
FOC90_15685	COG2814	Major facilitator Superfamily
FOC90_15690	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC90_15695	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
FOC90_15720	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC90_15725	COG1272	protein, Hemolysin III
FOC90_15745	COG1164	Oligoendopeptidase f
FOC90_15765	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOC90_15815	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOC90_15820	COG0322	excinuclease ABC activity
FOC90_15865	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FOC90_15880	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC90_15885	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FOC90_15890	COG4853	Protein conserved in bacteria
FOC90_15900	COG5002	protein histidine kinase activity
FOC90_15905	COG0745	RESPONSE REGULATOR receiver
FOC90_15935	COG0305	Participates in initiation and elongation during chromosome replication
FOC90_15945	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
FOC90_15950	COG4241	membrane
FOC90_15960	COG0629	single-stranded DNA binding
FOC90_15970	COG0012	GTP binding
FOC90_15975	COG4481	Protein conserved in bacteria
FOC90_15980	COG0668	transmembrane transport
FOC90_15990	COG1475	DNA binding
FOC90_15995	COG1192	Involved in chromosome partitioning
FOC90_16020	COG1847	R3H domain protein
FOC90_16035	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FOC90_16045	COG0592	DNA-directed DNA polymerase activity
FOC90_16050	COG2501	S4 domain
FOC90_16060	COG0187	DNA topoisomerase II activity
FOC90_16065	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOC90_16100	COG0516	GMP reductase activity
FOC90_16100	COG0517	IMP dehydrogenase activity
FOC90_16105	COG1686	Belongs to the peptidase S11 family
FOC90_16135	COG1428	Deoxynucleoside kinase
FOC90_16140	COG1428	Deoxynucleoside kinase
FOC90_16145	COG1335	isochorismatase
FOC90_16150	COG0590	tRNA wobble adenosine to inosine editing
FOC90_16160	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC90_16215	COG1982	Orn Lys Arg decarboxylase major
FOC90_16225	COG0470	DNA polymerase III
FOC90_16230	COG1774	PSP1 C-terminal conserved region
FOC90_16240	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FOC90_16250	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FOC90_16255	COG2002	toxin-antitoxin pair type II binding
FOC90_16265	COG0084	hydrolase, TatD family'
FOC90_16285	COG4466	Protein conserved in bacteria
FOC90_16300	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOC90_16305	COG0251	oxidation-reduction process
FOC90_16335	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOC90_16340	COG2002	toxin-antitoxin pair type II binding
FOC90_16345	COG2244	polysaccharide biosynthetic process
FOC90_16350	COG3956	TIGRFAM MazG family protein
FOC90_16355	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FOC90_16375	COG1098	S1 RNA binding domain
FOC90_16390	COG2208	phosphoserine phosphatase activity
FOC90_16405	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC90_16420	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC90_16425	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FOC90_16430	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC90_16435	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC90_16440	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FOC90_16445	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOC90_16450	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FOC90_16455	COG1396	sequence-specific DNA binding
FOC90_16460	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC90_16550	COG3880	PFAM UvrB UvrC protein
FOC90_16560	COG0542	response to heat
FOC90_16565	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FOC90_16575	COG4956	integral membrane protein (PIN domain superfamily)
FOC90_16595	COG1045	serine acetyltransferase
FOC90_16610	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC90_16615	COG3688	RNA-binding protein containing a PIN domain
FOC90_16630	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC90_16635	COG0250	Participates in transcription elongation, termination and antitermination
FOC90_16640	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FOC90_16660	COG2813	Specifically methylates the guanine in position
FOC90_16670	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FOC90_16675	COG1358	cellular component organization or biogenesis
FOC90_16680	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FOC90_16700	COG0051	transcription antitermination factor activity, RNA binding
FOC90_16705	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FOC90_16745	COG0255	Belongs to the universal ribosomal protein uL29 family
FOC90_16805	COG0201	protein transport
FOC90_16815	COG0024	Methionine aminopeptidase
FOC90_16825	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOC90_16860	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC90_16885	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC90_16890	COG0489	protein tyrosine kinase activity
FOC90_16900	COG2194	sulfuric ester hydrolase activity
FOC90_16905	COG0726	polysaccharide deacetylase
FOC90_16985	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
FOC90_16990	COG4856	YbbR-like protein
FOC90_17025	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_17030	COG2011	ABC-type metal ion transport system permease component
FOC90_17035	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC90_17040	COG1464	Belongs to the NlpA lipoprotein family
FOC90_17045	COG0604	alcohol dehydrogenase
FOC90_17055	COG0277	FAD linked oxidase domain protein
FOC90_17060	COG2271	Major facilitator Superfamily
FOC90_17070	COG2814	Major facilitator Superfamily
FOC90_17090	COG0601	transmembrane transport
FOC90_17095	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC90_17100	COG0444	Belongs to the ABC transporter superfamily
FOC90_17105	COG4608	Belongs to the ABC transporter superfamily
FOC90_17110	COG4166	transmembrane transport
FOC90_17125	COG4166	transmembrane transport
FOC90_17130	COG4166	transmembrane transport
FOC90_17135	COG0656	L-ascorbic acid biosynthetic process
FOC90_17150	COG4149	molybdate abc transporter
FOC90_17155	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOC90_17160	COG1910	domain protein
FOC90_17175	COG0697	spore germination
FOC90_17190	COG0204	Acyl-transferase
FOC90_17200	COG1609	Transcriptional regulator
FOC90_17210	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_17225	COG5298	Protein conserved in bacteria
FOC90_17245	COG0488	(ABC) transporter
FOC90_17255	COG0747	negative chemotaxis
FOC90_17260	COG0601	transmembrane transport
FOC90_17270	COG0444	Belongs to the ABC transporter superfamily
FOC90_17275	COG4608	Belongs to the ABC transporter superfamily
FOC90_17280	COG0561	phosphatase activity
FOC90_17305	COG3185	4-Hydroxyphenylpyruvate dioxygenase
FOC90_17310	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC90_17320	COG0531	amino acid
FOC90_17325	COG2814	Major facilitator Superfamily
FOC90_17335	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOC90_17345	COG4294	response to UV
FOC90_17350	COG0705	Rhomboid family
FOC90_17360	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOC90_17365	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC90_17370	COG0864	Transcriptional regulator
FOC90_17375	COG2337	Toxic component of a toxin-antitoxin (TA) module
FOC90_17380	COG2183	response to ionizing radiation
FOC90_17480	COG0802	atpase or kinase
FOC90_17485	COG1214	PFAM Peptidase M22, glycoprotease
FOC90_17490	COG0456	acetyltransferase
FOC90_17500	COG0488	(ABC) transporter
FOC90_17515	COG1266	CAAX protease self-immunity
FOC90_17650	COG1674	ftsk spoiiie
FOC90_17660	COG2946	Replication initiation factor
FOC90_17675	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC90_17685	COG2252	PERMEase
FOC90_17695	COG5002	protein histidine kinase activity
FOC90_17720	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FOC90_17740	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_17785	COG2205	protein histidine kinase activity
FOC90_17790	COG0745	RESPONSE REGULATOR receiver
FOC90_17810	COG0697	spore germination
FOC90_17835	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOC90_17840	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOC90_17845	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOC90_17855	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOC90_17870	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FOC90_17880	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOC90_17890	COG0151	Belongs to the GarS family
FOC90_17915	COG0210	DNA helicase
FOC90_17925	COG4851	CamS sex pheromone cAM373 precursor
FOC90_17940	COG1335	isochorismatase
FOC90_17950	COG2011	ABC-type metal ion transport system permease component
FOC90_17955	COG1464	Belongs to the NlpA lipoprotein family
FOC90_17970	COG0003	Pfam Anion-transporting ATPase
FOC90_17975	COG1846	Transcriptional regulator
FOC90_17980	COG4682	membrane
FOC90_18000	COG1597	lipid kinase activity
FOC90_18005	COG0546	phosphoglycolate phosphatase activity
FOC90_18010	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC90_18020	COG1012	belongs to the aldehyde dehydrogenase family
FOC90_18025	COG2076	Multidrug Resistance protein
FOC90_18035	COG2309	aminopeptidase activity
FOC90_18050	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC90_18060	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC90_18065	COG4807	Protein conserved in bacteria
FOC90_18095	COG1473	amidohydrolase
FOC90_18110	COG0450	alkyl hydroperoxide reductase
FOC90_18120	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
FOC90_18135	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC90_18140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC90_18145	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC90_18160	COG0166	Belongs to the GPI family
FOC90_18185	COG5002	protein histidine kinase activity
FOC90_18205	COG3541	Predicted nucleotidyltransferase
FOC90_18210	COG2814	Major facilitator Superfamily
FOC90_18215	COG0723	plastoquinol--plastocyanin reductase activity
FOC90_18215	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC90_18225	COG0765	amino acid transport
FOC90_18230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC90_18235	COG1126	abc transporter atp-binding protein
FOC90_18240	COG0840	transmembrane signaling receptor activity
FOC90_18265	COG0549	Belongs to the carbamate kinase family
FOC90_18270	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC90_18280	COG0277	FAD linked oxidase domain protein
FOC90_18285	COG0366	Alpha amylase catalytic
FOC90_18290	COG1263	PTS System
FOC90_18290	COG2190	(PTS) system
FOC90_18290	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC90_18320	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOC90_18340	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC90_18345	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC90_18350	COG1116	anion transmembrane transporter activity
FOC90_18355	COG0488	(ABC) transporter
FOC90_18400	COG2270	Major facilitator Superfamily
FOC90_18430	COG2310	stress, protein
FOC90_18435	COG2310	stress, protein
FOC90_18440	COG2310	stress, protein
FOC90_18445	COG0861	Integral membrane protein TerC family
FOC90_18455	COG3853	Toxic anion resistance protein (TelA)
FOC90_18470	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOC90_18480	COG1295	ribonuclease BN
FOC90_18485	COG2217	Heavy metal translocating P-type atpase
FOC90_18490	COG0697	spore germination
FOC90_18500	COG0681	Belongs to the peptidase S26 family
FOC90_18510	COG0586	Pfam SNARE associated Golgi protein
FOC90_18525	COG3871	stress protein (general stress protein 26)
FOC90_18530	COG0387	Pfam Sodium calcium exchanger
FOC90_18540	COG0535	radical SAM domain protein
FOC90_18560	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOC90_18565	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC90_18585	COG3829	transcription factor binding
FOC90_18595	COG0833	amino acid
FOC90_18600	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC90_18630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC90_18630	COG1263	PTS System
FOC90_18635	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOC90_18650	COG0463	Glycosyl transferase, family 2
FOC90_18660	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOC90_18660	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC90_18665	COG0463	Glycosyl transferase, family 2
FOC90_18680	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOC90_18700	COG1228	amidohydrolase
FOC90_18705	COG1090	epimerase
FOC90_18735	COG1988	membrane-bound metal-dependent
FOC90_18740	COG1194	a g-specific adenine glycosylase
FOC90_18765	COG1132	(ABC) transporter
FOC90_18770	COG4129	membrane
FOC90_18775	COG0070	glutamate synthase
FOC90_18775	COG0069	glutamate synthase activity
FOC90_18775	COG0067	glutamate synthase
FOC90_18785	COG4555	ABC transporter
FOC90_18805	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC90_18810	COG0735	belongs to the Fur family
FOC90_18930	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FOC90_18955	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOC90_18965	COG2766	serine protein kinase
FOC90_18980	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC90_18990	COG1585	Membrane protein implicated in regulation of membrane protease activity
FOC90_18995	COG2268	Band 7 protein
FOC90_19005	COG3290	protein histidine kinase activity
FOC90_19010	COG4565	transcriptional regulatory protein
FOC90_19015	COG2851	Citrate transporter
FOC90_19040	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC90_19045	COG3842	ATPase activity
FOC90_19050	COG1175	transmembrane transport
FOC90_19055	COG0395	ABC-type sugar transport system, permease component
FOC90_19065	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC90_19070	COG0745	RESPONSE REGULATOR receiver
FOC90_19075	COG5002	protein histidine kinase activity
FOC90_19085	COG4990	cell redox homeostasis
FOC90_19095	COG3290	protein histidine kinase activity
FOC90_19100	COG4565	transcriptional regulatory protein
FOC90_19105	COG3493	citrate carrier protein
FOC90_19110	COG0281	malic enzyme
FOC90_19125	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_19130	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_19140	COG5002	protein histidine kinase activity
FOC90_19160	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC90_19165	COG3383	formate dehydrogenase (NAD+) activity
FOC90_19170	COG2427	Protein of unknown function (DUF1641)
FOC90_19185	COG0531	amino acid
FOC90_19190	COG0640	Transcriptional regulator
FOC90_19195	COG2217	Heavy metal translocating P-type atpase
FOC90_19200	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOC90_19215	COG3227	Zinc metalloprotease (Elastase)
FOC90_19235	COG2720	vancomycin resistance protein
FOC90_19240	COG1316	TRANSCRIPTIONal
FOC90_19245	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC90_19250	COG0346	lactoylglutathione lyase activity
FOC90_19255	COG1253	flavin adenine dinucleotide binding
FOC90_19260	COG1027	Aspartate ammonia-lyase
FOC90_19265	COG1620	l-lactate permease
FOC90_19280	COG3104	oligopeptide transport
FOC90_19285	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC90_19290	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC90_19295	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC90_19310	COG0156	8-amino-7-oxononanoate synthase activity
FOC90_19315	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC90_19325	COG4548	von Willebrand factor, type A
FOC90_19330	COG0714	Associated with various cellular activities
FOC90_19350	COG0531	amino acid
FOC90_19355	COG2188	Transcriptional regulator
FOC90_19360	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC90_19360	COG1263	PTS System
FOC90_19365	COG0366	Alpha amylase catalytic
FOC90_19380	COG0697	spore germination
FOC90_19385	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOC90_19395	COG1115	amino acid carrier protein
FOC90_19400	COG1126	abc transporter atp-binding protein
FOC90_19405	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC90_19410	COG0765	amino acid transport
FOC90_19415	COG0765	amino acid transport
FOC90_19420	COG0833	amino acid
FOC90_19435	COG1595	DNA-templated transcription, initiation
FOC90_19445	COG2378	regulation of single-species biofilm formation
FOC90_19450	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FOC90_19455	COG5002	protein histidine kinase activity
FOC90_19480	COG0659	secondary active sulfate transmembrane transporter activity
FOC90_19495	COG2271	Major facilitator Superfamily
FOC90_19500	COG1846	Transcriptional regulator
FOC90_19505	COG0477	Major facilitator Superfamily
FOC90_19510	COG1609	Transcriptional regulator
FOC90_19515	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC90_19530	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC90_19535	COG1879	ABC-type sugar transport system periplasmic component
FOC90_19565	COG1063	alcohol dehydrogenase
FOC90_19615	COG0840	transmembrane signaling receptor activity
FOC90_19620	COG3584	3D domain protein
FOC90_19620	COG3583	domain protein
FOC90_19625	COG1476	TRANSCRIPTIONal
FOC90_19645	COG3104	oligopeptide transport
FOC90_19650	COG1114	Component of the transport system for branched-chain amino acids
FOC90_19665	COG1113	amino acid transport
FOC90_19670	COG2252	PERMEase
FOC90_19685	COG2153	protein acetylation
FOC90_19695	COG0475	glutathione-regulated potassium exporter activity
FOC90_19695	COG0569	domain protein
FOC90_19710	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC90_19720	COG0833	amino acid
FOC90_19725	COG4990	cell redox homeostasis
FOC90_19740	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC90_19745	COG0697	spore germination
FOC90_19750	COG0531	amino acid
FOC90_19765	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC90_19770	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC90_19775	COG1918	ferrous iron import across plasma membrane
FOC90_19775	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FOC90_19780	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC90_19785	COG0573	inorganic phosphate transmembrane transporter activity
FOC90_19790	COG0581	inorganic phosphate transmembrane transporter activity
FOC90_19800	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC90_19920	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
FOC90_19940	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC90_19945	COG1116	anion transmembrane transporter activity
FOC90_19950	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC90_19955	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC90_19960	COG0352	thiamine-phosphate diphosphorylase activity
FOC90_19965	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC90_19970	COG2104	thiamine diphosphate biosynthetic process
FOC90_19980	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC90_19985	COG0351	phosphomethylpyrimidine kinase
FOC90_20025	COG2205	protein histidine kinase activity
FOC90_20030	COG2814	Major facilitator Superfamily
FOC90_20035	COG1846	Transcriptional regulator
FOC90_20050	COG2252	PERMEase
FOC90_20055	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_20115	COG0778	Nitroreductase
FOC90_20120	COG2719	SpoVR family
FOC90_20140	COG1937	Protein conserved in bacteria
FOC90_20145	COG0425	Belongs to the sulfur carrier protein TusA family
FOC90_20145	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC90_20150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_20150	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC90_20155	COG0425	Belongs to the sulfur carrier protein TusA family
FOC90_20160	COG0425	Belongs to the sulfur carrier protein TusA family
FOC90_20160	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC90_20170	COG2210	Belongs to the sulfur carrier protein TusA family
FOC90_20175	COG0730	response to heat
FOC90_20185	COG1316	TRANSCRIPTIONal
FOC90_20190	COG0604	alcohol dehydrogenase
FOC90_20195	COG1283	sodium-dependent phosphate transmembrane transporter activity
FOC90_20210	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC90_20210	COG3711	transcriptional antiterminator
FOC90_20215	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOC90_20220	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOC90_20245	COG1388	LysM domain
FOC90_20245	COG3584	3D domain protein
FOC90_20250	COG0577	efflux transmembrane transporter activity
FOC90_20255	COG1136	(ABC) transporter
FOC90_20265	COG5522	Integral membrane protein (intg_mem_TP0381)
FOC90_20280	COG1114	Component of the transport system for branched-chain amino acids
FOC90_20285	COG3546	catalase activity
FOC90_20320	COG0586	Pfam SNARE associated Golgi protein
FOC90_20355	COG0531	amino acid
FOC90_20360	COG0475	glutathione-regulated potassium exporter activity
FOC90_20370	COG1737	Transcriptional regulator
FOC90_20380	COG1263	PTS System
FOC90_20380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOC90_20390	COG2259	Doxx family
FOC90_20410	COG1522	sequence-specific DNA binding
FOC90_20420	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_20425	COG0789	Transcriptional regulator
FOC90_20440	COG1309	transcriptional regulator
FOC90_20445	COG2814	Major facilitator Superfamily
FOC90_20450	COG1733	regulation of RNA biosynthetic process
FOC90_20470	COG0693	protein deglycase activity
FOC90_20475	COG0693	protein deglycase activity
FOC90_20475	COG0753	catalase activity
FOC90_20485	COG0531	amino acid
FOC90_20490	COG1012	belongs to the aldehyde dehydrogenase family
FOC90_20495	COG1132	(ABC) transporter
FOC90_20500	COG1132	(ABC) transporter
FOC90_20505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC90_20510	COG0765	amino acid transport
FOC90_20515	COG1126	abc transporter atp-binding protein
FOC90_20530	COG0189	ligase activity
FOC90_20560	COG0028	Belongs to the TPP enzyme family
FOC90_20565	COG3527	Alpha-acetolactate decarboxylase
FOC90_20580	COG0561	phosphatase activity
FOC90_20590	COG3409	Peptidoglycan-binding domain 1 protein
FOC90_20590	COG5632	N-Acetylmuramoyl-L-alanine amidase
FOC90_20595	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC90_20600	COG0318	PFAM AMP-dependent synthetase and ligase
FOC90_20610	COG0659	secondary active sulfate transmembrane transporter activity
FOC90_20615	COG2244	polysaccharide biosynthetic process
FOC90_20635	COG1024	Enoyl-CoA hydratase
FOC90_20655	COG1363	Peptidase, m42
FOC90_20690	COG0601	transmembrane transport
FOC90_20695	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC90_20700	COG0444	Belongs to the ABC transporter superfamily
FOC90_20705	COG4608	Belongs to the ABC transporter superfamily
FOC90_20715	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_20735	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOC90_20750	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC90_20755	COG2814	Major facilitator Superfamily
FOC90_20815	COG3157	Type VI secretion system effector, Hcp
FOC90_20870	COG0477	Major facilitator Superfamily
FOC90_20875	COG3290	protein histidine kinase activity
FOC90_20880	COG4565	transcriptional regulatory protein
FOC90_20885	COG3181	Tripartite tricarboxylate transporter family receptor
FOC90_20925	COG0210	DNA helicase
FOC90_20945	COG0305	Participates in initiation and elongation during chromosome replication
FOC90_20975	COG0477	Major facilitator Superfamily
FOC90_21060	COG1073	alpha beta
FOC90_21120	COG1183	phosphatidylcholine synthase activity
FOC90_21130	COG2814	Major facilitator Superfamily
FOC90_21135	COG0640	Transcriptional regulator
FOC90_21145	COG2376	Dihydroxyacetone kinase
FOC90_21155	COG2376	Dihydroxyacetone kinase
FOC90_21215	COG2373	Large extracellular alpha-helical protein
FOC90_21290	COG1191	sigma factor activity
FOC90_21300	COG2208	phosphoserine phosphatase activity
FOC90_21305	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC90_21360	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FOC90_21380	COG0420	3'-5' exonuclease activity
FOC90_21385	COG4717	serine-type aminopeptidase activity
FOC90_21400	COG1280	lysine exporter protein (LysE YggA)
FOC90_21405	COG0346	lactoylglutathione lyase activity
FOC90_21410	COG0346	lactoylglutathione lyase activity
FOC90_21425	COG2267	carboxylic ester hydrolase activity
FOC90_21450	COG2140	Oxalate decarboxylase
FOC90_21455	COG3620	sequence-specific DNA binding
FOC90_21465	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FOC90_21470	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOC90_21480	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOC90_21485	COG1695	Transcriptional regulator
FOC90_21515	COG3973	AAA domain
FOC90_21540	COG4980	gas vesicle protein
FOC90_21545	COG0537	adenosine 5'-monophosphoramidase activity
FOC90_21550	COG1131	(ABC) transporter
FOC90_21555	COG4473	ABC transporter
FOC90_21570	COG1309	transcriptional regulator
FOC90_21580	COG3402	PFAM membrane-flanked domain
FOC90_21585	COG3428	Bacterial PH domain
FOC90_21620	COG0697	spore germination
FOC90_21625	COG3402	PFAM membrane-flanked domain
FOC90_21635	COG2329	Antibiotic biosynthesis monooxygenase
FOC90_21640	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC90_21680	COG1309	transcriptional regulator
FOC90_21685	COG1511	domain protein
FOC90_21710	COG1609	Transcriptional regulator
FOC90_21720	COG1234	tRNA 3'-trailer cleavage
FOC90_21725	COG0095	Lipoate-protein ligase
FOC90_21735	COG0318	PFAM AMP-dependent synthetase and ligase
FOC90_21795	COG1073	alpha beta
FOC90_21800	COG1408	metallophosphoesterase
FOC90_21805	COG1078	dGTPase activity
FOC90_21815	COG1595	DNA-templated transcription, initiation
FOC90_21820	COG3708	Transcriptional regulator
FOC90_21820	COG2207	Transcriptional regulator
FOC90_21830	COG2205	protein histidine kinase activity
FOC90_21835	COG0745	RESPONSE REGULATOR receiver
FOC90_21855	COG0501	Belongs to the peptidase M48B family
FOC90_21860	COG0840	transmembrane signaling receptor activity
FOC90_21870	COG3693	PFAM glycoside hydrolase, family 10
FOC90_21880	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FOC90_21885	COG2224	Isocitrate lyase
FOC90_21900	COG1278	Cold shock
FOC90_21915	COG4903	ComK protein
FOC90_21920	COG0398	Pfam SNARE associated Golgi protein
FOC90_21980	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC90_22005	COG0367	asparagine synthase
FOC90_22015	COG0753	catalase activity
FOC90_22020	COG0004	ammonium transporteR
FOC90_22040	COG2996	Protein conserved in bacteria
FOC90_22045	COG3209	COG3209 Rhs family protein
FOC90_22100	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_22115	COG0561	phosphatase activity
FOC90_22135	COG2267	carboxylic ester hydrolase activity
FOC90_22150	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC90_22155	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC90_22160	COG5504	Zn-dependent protease
FOC90_22170	COG0180	Tryptophanyl-tRNA synthetase
FOC90_22180	COG4166	transmembrane transport
FOC90_22185	COG0601	transmembrane transport
FOC90_22190	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC90_22195	COG0444	Belongs to the ABC transporter superfamily
FOC90_22200	COG4608	Belongs to the ABC transporter superfamily
FOC90_22205	COG0534	Mate efflux family protein
FOC90_22210	COG4166	transmembrane transport
FOC90_22225	COG0861	Integral membrane protein TerC family
FOC90_22235	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC90_22245	COG1164	Oligoendopeptidase f
FOC90_22260	COG2346	COG2346, Truncated hemoglobins
FOC90_22265	COG4116	CYTH
FOC90_22275	COG2357	RelA SpoT domain protein
FOC90_22285	COG0564	pseudouridine synthase activity
FOC90_22300	COG0772	Belongs to the SEDS family
FOC90_22305	COG1216	Glycosyl transferase, family 2
FOC90_22345	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FOC90_22360	COG1091	dTDP-4-dehydrorhamnose reductase activity
FOC90_22405	COG2153	protein acetylation
FOC90_22415	COG2382	esterase
FOC90_22430	COG5492	domain, Protein
FOC90_22435	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC90_22445	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOC90_22445	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC90_22480	COG1620	l-lactate permease
FOC90_22485	COG5634	Uncharacterized conserved protein (DUF2278)
FOC90_22540	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC90_22550	COG1476	TRANSCRIPTIONal
FOC90_22580	COG4152	abc transporter atp-binding protein
FOC90_22585	COG1668	transmembrane transport
FOC90_22610	COG2226	methyltransferase
FOC90_22620	COG1686	Belongs to the peptidase S11 family
FOC90_22625	COG0681	Belongs to the peptidase S26 family
FOC90_22660	COG1012	belongs to the aldehyde dehydrogenase family
FOC90_22670	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC90_22675	COG1177	transmembrane transport
FOC90_22685	COG0671	phosphoesterase, PA-phosphatase related
FOC90_22690	COG2409	Drug exporters of the RND superfamily
FOC90_22700	COG0564	pseudouridine synthase activity
FOC90_22710	COG2340	Cysteine-rich secretory protein family
FOC90_22715	COG0247	lactate metabolic process
FOC90_22720	COG0277	FAD linked oxidase domain protein
FOC90_22725	COG3835	regulator
FOC90_22735	COG0745	RESPONSE REGULATOR receiver
FOC90_22740	COG5002	protein histidine kinase activity
FOC90_22745	COG2186	Transcriptional regulator
FOC90_22765	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FOC90_22775	COG2116	formate transmembrane transporter activity
FOC90_22780	COG0861	Integral membrane protein TerC family
FOC90_22785	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC90_22795	COG2030	dehydratase
FOC90_22815	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_22820	COG3243	poly(R)-hydroxyalkanoic acid synthase
FOC90_22830	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC90_22845	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC90_22850	COG3842	ATPase activity
FOC90_22875	COG1349	DNA-binding transcription factor activity
FOC90_22885	COG0235	Class ii aldolase
FOC90_22895	COG2861	carbohydrate metabolic process
FOC90_22905	COG3852	Histidine kinase
FOC90_22910	COG1846	Transcriptional regulator
FOC90_22920	COG2318	DinB family
FOC90_22925	COG5002	protein histidine kinase activity
FOC90_22935	COG0720	synthase
FOC90_22950	COG4873	Protein conserved in bacteria
FOC90_22980	COG1780	Probably involved in ribonucleotide reductase function
FOC90_22985	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOC90_22990	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOC90_22995	COG1725	Transcriptional regulator
FOC90_23000	COG1131	(ABC) transporter
FOC90_23010	COG1131	(ABC) transporter
FOC90_23030	COG1522	sequence-specific DNA binding
FOC90_23040	COG1335	isochorismatase
FOC90_23050	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC90_23055	COG2070	2-Nitropropane dioxygenase
FOC90_23060	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC90_23070	COG1696	Membrane protein involved in D-alanine export
FOC90_23095	COG0716	FMN binding
FOC90_23150	COG1846	Transcriptional regulator
FOC90_23160	COG1301	dicarboxylic acid transport
FOC90_23165	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC90_23170	COG4709	membrane
FOC90_23175	COG3874	Sporulation protein YtfJ
FOC90_23195	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC90_23200	COG0028	Belongs to the TPP enzyme family
FOC90_23205	COG0440	acetolactate synthase activity
FOC90_23280	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOC90_23295	COG1183	phosphatidylcholine synthase activity
FOC90_23300	COG1368	sulfuric ester hydrolase activity
FOC90_23310	COG0019	diaminopimelate decarboxylase activity
FOC90_23330	COG0529	Catalyzes the synthesis of activated sulfate
FOC90_23335	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC90_23355	COG1648	precorrin-2 dehydrogenase activity
FOC90_23360	COG0733	neurotransmitter:sodium symporter activity
FOC90_23385	COG1757	Na H antiporter
FOC90_23400	COG4758	membrane
FOC90_23405	COG4585	Histidine kinase
FOC90_23410	COG2197	response regulator
FOC90_23420	COG1114	Component of the transport system for branched-chain amino acids
FOC90_23470	COG0730	response to heat
FOC90_23475	COG0306	phosphate transporter
FOC90_23480	COG1392	Phosphate transport regulator
FOC90_23485	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC90_23500	COG3852	Histidine kinase
FOC90_23505	COG1801	Protein of unknown function DUF72
FOC90_23515	COG0582	viral genome integration into host DNA
FOC90_23520	COG5002	protein histidine kinase activity
FOC90_23535	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FOC90_23535	COG0392	lysyltransferase activity
FOC90_23550	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC90_23555	COG1686	Belongs to the peptidase S11 family
FOC90_23560	COG2715	membrane protein required for spore maturation
FOC90_23565	COG0700	Nucleoside recognition
FOC90_23570	COG1187	pseudouridine synthase activity
FOC90_23580	COG1333	cytochrome c biogenesis protein
FOC90_23585	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC90_23590	COG0745	RESPONSE REGULATOR receiver
FOC90_23595	COG5002	protein histidine kinase activity
FOC90_23600	COG2096	Adenosyltransferase
FOC90_23605	COG4942	peptidase
FOC90_23615	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FOC90_23620	COG1141	Ferredoxin
FOC90_23630	COG0514	ATP-dependent DNA helicase (RecQ)
FOC90_23635	COG1266	CAAX protease self-immunity
FOC90_23645	COG1408	metallophosphoesterase
FOC90_23650	COG0789	Transcriptional regulator
FOC90_23660	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC90_23680	COG0492	ferredoxin-NADP+ reductase activity
FOC90_23685	COG0252	asparaginase activity
FOC90_23755	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC90_23770	COG0142	geranyltranstransferase activity
FOC90_23780	COG0142	geranyltranstransferase activity
FOC90_23805	COG0457	Tetratricopeptide repeat
FOC90_23825	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOC90_23830	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOC90_23830	COG2010	Cytochrome c
FOC90_23835	COG4347	Protein of unknown function (DUF1405)
FOC90_23850	COG2738	Putative neutral zinc metallopeptidase
FOC90_23860	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_23865	COG1694	Mazg nucleotide pyrophosphohydrolase
FOC90_23885	COG0438	transferase activity, transferring glycosyl groups
FOC90_23920	COG1199	ATP-dependent helicase activity
FOC90_23920	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOC90_23940	COG3935	DnaD domain protein
FOC90_23945	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOC90_23955	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC90_23955	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC90_24010	COG0116	Belongs to the methyltransferase superfamily
FOC90_24020	COG1199	ATP-dependent helicase activity
FOC90_24025	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FOC90_24035	COG3173	Aminoglycoside phosphotransferase
FOC90_24040	COG0024	Methionine aminopeptidase
FOC90_24050	COG2233	PERMEase
FOC90_24055	COG2311	Membrane
FOC90_24065	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOC90_24075	COG0456	acetyltransferase
FOC90_24110	COG0754	glutathionylspermidine amidase activity
FOC90_24125	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOC90_24140	COG3944	biosynthesis protein
FOC90_24150	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOC90_24165	COG1215	transferase activity, transferring glycosyl groups
FOC90_24170	COG0438	transferase activity, transferring glycosyl groups
FOC90_24185	COG0454	-acetyltransferase
FOC90_24205	COG0328	RNA-DNA hybrid ribonuclease activity
FOC90_24240	COG3403	YqcI/YcgG family
FOC90_24245	COG1280	lysine exporter protein (LysE YggA)
FOC90_24265	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC90_24270	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC90_24280	COG0475	glutathione-regulated potassium exporter activity
FOC90_24290	COG0789	Transcriptional regulator
FOC90_24290	COG4978	Transcriptional regulator
FOC90_24300	COG2323	membrane
FOC90_24305	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOC90_24345	COG1923	regulation of RNA biosynthetic process
FOC90_24355	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FOC90_24360	COG1360	Flagellar Motor Protein
FOC90_24365	COG2201	protein-glutamate methylesterase activity
FOC90_24370	COG2198	Histidine kinase
FOC90_24370	COG0643	Histidine kinase
FOC90_24375	COG1776	CheC inhibitor of MCP methylation
FOC90_24375	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC90_24390	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC90_24410	COG1256	bacterial-type flagellum assembly
FOC90_24415	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC90_24435	COG1815	bacterial-type flagellum-dependent cell motility
FOC90_24440	COG1558	bacterial-type flagellum-dependent cell motility
FOC90_24450	COG1766	The M ring may be actively involved in energy transduction
FOC90_24455	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC90_24465	COG1157	protein secretion by the type III secretion system
FOC90_24485	COG1749	Flagellar hook protein flgE
FOC90_24500	COG0835	chemotaxis
FOC90_24500	COG0784	Response regulator, receiver
FOC90_24520	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOC90_24525	COG0741	lytic transglycosylase activity
FOC90_24535	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC90_24540	COG1776	CheC inhibitor of MCP methylation
FOC90_24540	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC90_24550	COG1338	Plays a role in the flagellum-specific transport system
FOC90_24555	COG1987	bacterial-type flagellum assembly
FOC90_24565	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC90_24570	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC90_24575	COG1419	protein localization to endoplasmic reticulum
FOC90_24580	COG4786	Flagellar basal body rod
FOC90_24585	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC90_24590	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC90_24620	COG2329	Antibiotic biosynthesis monooxygenase
FOC90_24625	COG1215	transferase activity, transferring glycosyl groups
FOC90_24650	COG0583	DNA-binding transcription factor activity
FOC90_24670	COG1234	tRNA 3'-trailer cleavage
FOC90_24705	COG0406	alpha-ribazole phosphatase activity
FOC90_24725	COG1846	Transcriptional regulator
FOC90_24735	COG0367	asparagine synthase
FOC90_24775	COG0523	cobalamin synthesis protein
FOC90_24780	COG0701	Predicted permease
FOC90_24790	COG0438	transferase activity, transferring glycosyl groups
FOC90_24790	COG1216	Glycosyl transferase, family 2
FOC90_24795	COG1757	Na H antiporter
FOC90_24800	COG0789	Transcriptional regulator
FOC90_24830	COG0534	Mate efflux family protein
FOC90_24835	COG3340	Belongs to the peptidase S51 family
FOC90_24855	COG0785	Cytochrome C biogenesis protein
FOC90_24860	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC90_24875	COG0457	Tetratricopeptide repeat
FOC90_24895	COG2733	membrane
FOC90_24930	COG1131	(ABC) transporter
FOC90_24945	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC90_24950	COG0528	UMP kinase activity
FOC90_24960	COG1027	Aspartate ammonia-lyase
FOC90_24965	COG0281	malic enzyme
FOC90_24970	COG4191	Histidine kinase
FOC90_24975	COG0784	Response regulator, receiver
FOC90_24980	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOC90_25025	COG2814	Major facilitator Superfamily
FOC90_25040	COG1695	Transcriptional regulator
FOC90_25050	COG0477	Major facilitator Superfamily
FOC90_25060	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOC90_25065	COG2223	nitrite transmembrane transporter activity
FOC90_25070	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC90_25090	COG0733	neurotransmitter:sodium symporter activity
FOC90_25100	COG5566	PFAM Mor transcription activator
FOC90_25105	COG2323	membrane
FOC90_25125	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC90_25135	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC90_25140	COG0028	Belongs to the TPP enzyme family
FOC90_25160	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC90_25185	COG2814	Major facilitator Superfamily
FOC90_25190	COG3384	dioxygenase
FOC90_25205	COG3279	Response regulator of the LytR AlgR family
FOC90_25210	COG0427	acetyl-CoA hydrolase
FOC90_25230	COG4166	transmembrane transport
FOC90_25235	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_25255	COG1914	H( )-stimulated, divalent metal cation uptake system
FOC90_25270	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC90_25275	COG0531	amino acid
FOC90_25295	COG2309	aminopeptidase activity
FOC90_25310	COG0456	acetyltransferase
FOC90_25325	COG1309	transcriptional regulator
FOC90_25330	COG2390	Transcriptional regulator
FOC90_25340	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC90_25345	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOC90_25350	COG0295	cytidine deaminase activity
FOC90_25385	COG4846	Membrane protein involved in cytochrome C biogenesis
FOC90_25395	COG0006	proline dipeptidase activity
FOC90_25405	COG2132	Multicopper oxidase
FOC90_25435	COG1114	Component of the transport system for branched-chain amino acids
FOC90_25445	COG1276	copper resistance
FOC90_25445	COG2372	response to copper ion
FOC90_25450	COG4549	nuclear export factor GLE1
FOC90_25455	COG0697	spore germination
FOC90_25460	COG0583	DNA-binding transcription factor activity
FOC90_25465	COG1959	2 iron, 2 sulfur cluster binding
FOC90_25470	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FOC90_25475	COG0778	Nitroreductase
FOC90_25485	COG0628	permease
FOC90_25495	COG1231	oxidoreductase activity
FOC90_25500	COG0523	cobalamin synthesis protein
FOC90_25510	COG0411	ABC transporter
FOC90_25530	COG0583	DNA-binding transcription factor activity
FOC90_25560	COG1271	oxidase subunit
FOC90_25565	COG1294	oxidase, subunit
FOC90_25570	COG4988	ABC transporter
FOC90_25575	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOC90_25585	COG1216	Glycosyl transferase, family 2
FOC90_25625	COG1686	Belongs to the peptidase S11 family
FOC90_25640	COG1388	LysM domain
FOC90_25640	COG0791	NLP P60 protein
FOC90_25650	COG1132	(ABC) transporter
FOC90_25655	COG0745	RESPONSE REGULATOR receiver
FOC90_25660	COG5002	protein histidine kinase activity
FOC90_25665	COG0300	oxidoreductase activity
FOC90_25675	COG4122	O-methyltransferase activity
FOC90_25705	COG0460	homoserine dehydrogenase
FOC90_25730	COG1316	TRANSCRIPTIONal
FOC90_25745	COG1285	pathogenesis
FOC90_25750	COG1247	-acetyltransferase
FOC90_25760	COG4264	IucA IucC family
FOC90_25765	COG0318	PFAM AMP-dependent synthetase and ligase
FOC90_25780	COG1082	Xylose isomerase domain protein TIM barrel
FOC90_25790	COG2814	Major facilitator Superfamily
FOC90_25795	COG1279	arginine transmembrane transporter activity
FOC90_25800	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_25810	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOC90_25850	COG2002	toxin-antitoxin pair type II binding
FOC90_25855	COG1404	Belongs to the peptidase S8 family
FOC90_25860	COG0640	Transcriptional regulator
FOC90_25865	COG0667	Aldo Keto reductase
FOC90_25895	COG0840	transmembrane signaling receptor activity
FOC90_25910	COG3949	Membrane
FOC90_25915	COG0783	Belongs to the Dps family
FOC90_25930	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC90_25940	COG1231	oxidoreductase activity
FOC90_25945	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_25950	COG4989	oxidoreductase activity
FOC90_25955	COG0523	cobalamin synthesis protein
FOC90_25960	COG0456	acetyltransferase
FOC90_25965	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC90_25975	COG0702	epimerase
FOC90_25985	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC90_25995	COG4166	transmembrane transport
FOC90_26010	COG0406	alpha-ribazole phosphatase activity
FOC90_26020	COG5337	Spore coat protein CotH
FOC90_26025	COG1051	belongs to the nudix hydrolase family
FOC90_26030	COG0586	Pfam SNARE associated Golgi protein
FOC90_26035	COG2244	polysaccharide biosynthetic process
FOC90_26045	COG0701	Predicted permease
FOC90_26050	COG3689	TIGRFAM TIGR03943 family protein
FOC90_26055	COG1607	acyl-coa hydrolase
FOC90_26065	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC90_26080	COG0702	epimerase
FOC90_26085	COG2839	Protein conserved in bacteria
FOC90_26090	COG1253	flavin adenine dinucleotide binding
FOC90_26115	COG1114	Component of the transport system for branched-chain amino acids
FOC90_26120	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC90_26140	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC90_26150	COG1876	peptidase activity
FOC90_26165	COG2211	Major facilitator Superfamily
FOC90_26180	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC90_26190	COG0561	phosphatase activity
FOC90_26195	COG1846	Transcriptional regulator
FOC90_26200	COG2814	Major facilitator Superfamily
FOC90_26210	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC90_26215	COG4106	trans-aconitate 2-methyltransferase activity
FOC90_26230	COG1819	glycosyl
FOC90_26235	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOC90_26240	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_26270	COG0456	acetyltransferase
FOC90_26425	COG4974	Belongs to the 'phage' integrase family
FOC90_26435	COG3874	Sporulation protein YtfJ
FOC90_26460	COG2226	methyltransferase
FOC90_26480	COG1082	Xylose isomerase domain protein TIM barrel
FOC90_26485	COG0346	lactoylglutathione lyase activity
FOC90_26495	COG0604	alcohol dehydrogenase
FOC90_26500	COG1595	DNA-templated transcription, initiation
FOC90_26510	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FOC90_26520	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC90_26520	COG0426	domain, Protein
FOC90_26530	COG0386	Belongs to the glutathione peroxidase family
FOC90_26535	COG1305	Transglutaminase-like
FOC90_26540	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
FOC90_26545	COG0714	Associated with various cellular activities
FOC90_26550	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOC90_26555	COG1140	nitrate reductase beta subunit
FOC90_26560	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOC90_26565	COG2181	nitrate reductase activity
FOC90_26570	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC90_26575	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC90_26580	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC90_26585	COG0303	'Molybdopterin
FOC90_26590	COG0314	molybdopterin synthase activity
FOC90_26600	COG2223	nitrite transmembrane transporter activity
FOC90_26615	COG1648	precorrin-2 dehydrogenase activity
FOC90_26620	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
FOC90_26625	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC90_26625	COG1587	Uroporphyrinogen-III synthase
FOC90_26630	COG2146	nitrite reductase [NAD(P)H] activity
FOC90_26635	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC90_26640	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
FOC90_26675	COG2359	stage V sporulation protein S
FOC90_26695	COG0457	Tetratricopeptide repeat
FOC90_26710	COG1418	mRNA catabolic process
FOC90_26715	COG0488	(ABC) transporter
FOC90_26730	COG0629	single-stranded DNA binding
FOC90_26740	COG1413	lyase activity
FOC90_26755	COG2136	Putative SAM-dependent methyltransferase
FOC90_26755	COG2521	methyltransferase
FOC90_26760	COG0018	arginyl-trna synthetase
FOC90_26800	COG0017	Asparaginyl-tRNA synthetase
FOC90_26805	COG0733	neurotransmitter:sodium symporter activity
FOC90_26830	COG2610	gluconate transmembrane transporter activity
FOC90_26840	COG1794	racemase activity, acting on amino acids and derivatives
FOC90_26850	COG0456	acetyltransferase
FOC90_26860	COG3655	Transcriptional regulator
FOC90_26865	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOC90_26875	COG1131	(ABC) transporter
FOC90_26890	COG0546	phosphoglycolate phosphatase activity
FOC90_26920	COG0768	penicillin binding
FOC90_26930	COG0204	Acyl-transferase
FOC90_26935	COG1272	protein, Hemolysin III
FOC90_26945	COG0805	protein transport
FOC90_26955	COG1307	EDD domain protein, DegV family
FOC90_26965	COG1999	signal sequence binding
FOC90_26970	COG0071	Belongs to the small heat shock protein (HSP20) family
FOC90_26975	COG0367	asparagine synthase
FOC90_26990	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC90_26995	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC90_27000	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC90_27015	COG1335	isochorismatase
FOC90_27020	COG1051	belongs to the nudix hydrolase family
FOC90_27025	COG0668	transmembrane transport
FOC90_27030	COG4585	Histidine kinase
FOC90_27030	COG2203	Gaf domain
FOC90_27035	COG2197	response regulator
FOC90_27040	COG1737	Transcriptional regulator
FOC90_27045	COG0384	phenazine biosynthesis protein PhzF
FOC90_27050	COG1064	alcohol dehydrogenase
FOC90_27065	COG1070	Carbohydrate kinase
FOC90_27075	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FOC90_27110	COG0517	IMP dehydrogenase activity
FOC90_27110	COG1125	glycine betaine transport
FOC90_27115	COG1174	glycine betaine transport
FOC90_27150	COG1253	flavin adenine dinucleotide binding
FOC90_27155	COG1012	belongs to the aldehyde dehydrogenase family
FOC90_27160	COG5506	Protein of unknown function (DUF1694)
FOC90_27175	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC90_27180	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOC90_27185	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC90_27190	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC90_27195	COG0456	acetyltransferase
FOC90_27200	COG3829	transcription factor binding
FOC90_27205	COG1509	lysine 2,3-aminomutase activity
FOC90_27240	COG0515	serine threonine protein kinase
FOC90_27240	COG3064	Membrane
FOC90_27240	COG4991	sh3 domain protein
FOC90_27250	COG0671	phosphoesterase, PA-phosphatase related
FOC90_27255	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOC90_27260	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC90_27335	COG0300	oxidoreductase activity
FOC90_27355	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC90_27355	COG4499	WXG100 protein secretion system (Wss), protein YukC
FOC90_27365	COG2814	Major facilitator Superfamily
FOC90_27370	COG4841	protein insertion into membrane
FOC90_27375	COG0372	Belongs to the citrate synthase family
FOC90_27380	COG2079	MmgE PrpD family protein
FOC90_27385	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FOC90_27390	COG1960	acyl-CoA dehydrogenase activity
FOC90_27395	COG2084	Dehydrogenase
FOC90_27405	COG1280	lysine exporter protein (LysE YggA)
FOC90_27410	COG1024	Enoyl-CoA hydratase
FOC90_27425	COG0420	3'-5' exonuclease activity
FOC90_27430	COG0419	ATPase involved in DNA repair
FOC90_27450	COG2223	nitrite transmembrane transporter activity
FOC90_27455	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_27460	COG1169	isochorismate synthase
FOC90_27465	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOC90_27470	COG1535	isochorismatase
FOC90_27470	COG3433	isochorismatase activity
FOC90_27475	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC90_27480	COG3251	PFAM MbtH domain protein
FOC90_27485	COG2814	Major facilitator Superfamily
FOC90_27500	COG0776	regulation of translation
FOC90_27510	COG2318	DinB family
FOC90_27520	COG1115	amino acid carrier protein
FOC90_27540	COG1187	pseudouridine synthase activity
FOC90_27545	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC90_27550	COG1136	(ABC) transporter
FOC90_27595	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC90_27615	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_27650	COG1247	-acetyltransferase
FOC90_27685	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_27715	COG0583	DNA-binding transcription factor activity
FOC90_27720	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC90_27735	COG0583	DNA-binding transcription factor activity
FOC90_27740	COG2258	MOSC domain
FOC90_27755	COG1132	(ABC) transporter
FOC90_27760	COG1132	(ABC) transporter
FOC90_27785	COG1396	sequence-specific DNA binding
FOC90_27815	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC90_27820	COG1595	DNA-templated transcription, initiation
FOC90_27845	COG1649	PFAM Uncharacterised BCR, COG1649
FOC90_27870	COG2971	BadF BadG BcrA BcrD
FOC90_27880	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOC90_27890	COG1846	Transcriptional regulator
FOC90_27905	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_27920	COG0500	methyltransferase
FOC90_27920	COG3615	Tellurite resistance protein tehB
FOC90_27930	COG2226	methyltransferase
FOC90_27975	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC90_28000	COG2002	toxin-antitoxin pair type II binding
FOC90_28010	COG0730	response to heat
FOC90_28020	COG1686	Belongs to the peptidase S11 family
FOC90_28035	COG2814	Major facilitator Superfamily
FOC90_28065	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_28110	COG0741	lytic transglycosylase activity
FOC90_28115	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_28125	COG0456	acetyltransferase
FOC90_28135	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC90_28140	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC90_28145	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC90_28160	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FOC90_28170	COG2234	aminopeptidase activity
FOC90_28175	COG2814	Major facilitator Superfamily
FOC90_28215	COG1396	sequence-specific DNA binding
FOC90_28265	COG0768	penicillin binding
FOC90_28270	COG1595	DNA-templated transcription, initiation
FOC90_28300	COG1408	metallophosphoesterase
FOC90_28320	COG1309	transcriptional regulator
FOC90_28335	COG1960	acyl-CoA dehydrogenase activity
FOC90_28340	COG0439	Biotin carboxylase
FOC90_28345	COG0511	ligase activity, forming carbon-carbon bonds
FOC90_28350	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC90_28355	COG1024	Enoyl-CoA hydratase
FOC90_28360	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC90_28365	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC90_28400	COG1686	Belongs to the peptidase S11 family
FOC90_28430	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC90_28445	COG3227	Zinc metalloprotease (Elastase)
FOC90_28450	COG2207	Transcriptional regulator
FOC90_28480	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC90_28490	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_28495	COG1733	regulation of RNA biosynthetic process
FOC90_28540	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_28565	COG2323	membrane
FOC90_28575	COG0693	protein deglycase activity
FOC90_28585	COG3386	PFAM SMP-30 Gluconolaconase
FOC90_28595	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
FOC90_28600	COG3773	Cell wall hydrolase
FOC90_28610	COG0745	RESPONSE REGULATOR receiver
FOC90_28615	COG2205	protein histidine kinase activity
FOC90_28620	COG0583	DNA-binding transcription factor activity
FOC90_28625	COG0667	Aldo Keto reductase
FOC90_28645	COG1136	(ABC) transporter
FOC90_28650	COG0577	efflux transmembrane transporter activity
FOC90_28675	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_28685	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC90_28745	COG2124	cytochrome p450
FOC90_28780	COG0561	phosphatase activity
FOC90_28785	COG5002	protein histidine kinase activity
FOC90_28800	COG1819	glycosyl
FOC90_28805	COG1794	racemase activity, acting on amino acids and derivatives
FOC90_28855	COG0662	Cupin 2, conserved barrel domain protein
FOC90_28865	COG1329	Transcriptional regulator
FOC90_28925	COG1733	regulation of RNA biosynthetic process
FOC90_28935	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FOC90_28945	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOC90_28945	COG2918	glutathione biosynthetic process
FOC90_28955	COG0640	Transcriptional regulator
FOC90_28960	COG0288	reversible hydration of carbon dioxide
FOC90_28970	COG2814	Major facilitator Superfamily
FOC90_28980	COG0415	Belongs to the DNA photolyase family
FOC90_28990	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC90_29000	COG2155	Conserved Protein
FOC90_29015	COG1090	epimerase
FOC90_29035	COG1533	DNA photolyase activity
FOC90_29075	COG2205	protein histidine kinase activity
FOC90_29135	COG2169	Transcriptional regulator
FOC90_29165	COG0604	alcohol dehydrogenase
FOC90_29170	COG0671	phosphoesterase, PA-phosphatase related
FOC90_29220	COG2814	Major facilitator Superfamily
FOC90_29240	COG0584	glycerophosphoryl diester phosphodiesterase
FOC90_29265	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_29270	COG0697	spore germination
FOC90_29295	COG0494	nUDIX hydrolase
FOC90_29315	COG2223	nitrite transmembrane transporter activity
FOC90_29330	COG0592	DNA-directed DNA polymerase activity
FOC90_29335	COG1051	belongs to the nudix hydrolase family
FOC90_29360	COG3878	Protein conserved in bacteria
FOC90_29380	COG4667	esterase of the alpha-beta hydrolase superfamily
FOC90_29420	COG0322	excinuclease ABC activity
FOC90_29455	COG1819	glycosyl
FOC90_29460	COG1819	glycosyl
FOC90_29475	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC90_29500	COG1011	Hydrolase
FOC90_29505	COG0745	RESPONSE REGULATOR receiver
FOC90_29510	COG5002	protein histidine kinase activity
FOC90_29525	COG1136	(ABC) transporter
FOC90_29530	COG0577	efflux transmembrane transporter activity
FOC90_29535	COG1073	alpha beta
FOC90_29545	COG0076	glutamate decarboxylase activity
FOC90_29560	COG1523	belongs to the glycosyl hydrolase 13 family
FOC90_29565	COG3227	Zinc metalloprotease (Elastase)
FOC90_29570	COG0737	Belongs to the 5'-nucleotidase family
FOC90_29585	COG0346	lactoylglutathione lyase activity
FOC90_29590	COG0201	protein transport
FOC90_29595	COG0697	spore germination
FOC90_29600	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_29635	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_29650	COG2959	enzyme of heme biosynthesis
FOC90_29690	COG1309	transcriptional regulator
FOC90_29710	COG3284	Transcriptional regulator
FOC90_29730	COG1349	DNA-binding transcription factor activity
FOC90_29745	COG1959	2 iron, 2 sulfur cluster binding
FOC90_29760	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC90_29765	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC90_29770	COG0022	dehydrogenase e1 component
FOC90_29775	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC90_29790	COG1028	Short-chain dehydrogenase reductase Sdr
FOC90_29795	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC90_29795	COG0456	acetyltransferase
FOC90_29835	COG4176	ABC-type proline glycine betaine transport system permease component
FOC90_29840	COG4175	Glycine betaine
FOC90_29840	COG0517	IMP dehydrogenase activity
FOC90_29870	COG2153	protein acetylation
FOC90_29890	COG3397	chitin binding
FOC90_29895	COG1819	glycosyl
FOC90_29905	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOC90_29915	COG2205	protein histidine kinase activity
FOC90_29920	COG2267	carboxylic ester hydrolase activity
FOC90_29920	COG2226	methyltransferase
FOC90_29925	COG2315	Protein conserved in bacteria
FOC90_29975	COG0456	acetyltransferase
FOC90_29980	COG3973	AAA domain
FOC90_29995	COG0514	ATP-dependent DNA helicase (RecQ)
FOC90_30025	COG4637	Psort location Cytoplasmic, score
FOC90_30045	COG3397	chitin binding
FOC90_30060	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC90_30065	COG1115	amino acid carrier protein
FOC90_30070	COG1012	belongs to the aldehyde dehydrogenase family
FOC90_30075	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC90_30085	COG3938	Belongs to the proline racemase family
FOC90_30090	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC90_30135	COG0586	Pfam SNARE associated Golgi protein
FOC90_30145	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOC90_30150	COG4166	transmembrane transport
FOC90_30160	COG4948	Mandelate Racemase Muconate Lactonizing
FOC90_30175	COG0667	Aldo Keto reductase
FOC90_30220	COG3850	Histidine kinase
FOC90_30220	COG5002	protein histidine kinase activity
FOC90_30225	COG0745	RESPONSE REGULATOR receiver
FOC90_30250	COG1164	Oligoendopeptidase f
FOC90_30255	COG1307	EDD domain protein, DegV family
FOC90_30295	COG2814	Major facilitator Superfamily
FOC90_30305	COG1664	Polymer-forming cytoskeletal
FOC90_30310	COG0789	Transcriptional regulator
FOC90_30315	COG4533	DNA binding
FOC90_30320	COG2814	Major facilitator Superfamily
FOC90_30320	COG0477	Major facilitator Superfamily
FOC90_30345	COG2261	transglycosylase associated protein
FOC90_30360	COG2226	methyltransferase
FOC90_30395	COG0436	Aminotransferase
FOC90_30400	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOC90_30445	COG0628	permease
FOC90_30460	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC90_30465	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC90_30495	COG2746	aminoglycoside 3-N-acetyltransferase activity
FOC90_30505	COG0697	spore germination
FOC90_30510	COG2318	DinB family
FOC90_30530	COG4912	Dna alkylation repair
FOC90_30535	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC90_30540	COG0346	lactoylglutathione lyase activity
FOC90_30545	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_30575	COG0861	Integral membrane protein TerC family
FOC90_30580	COG1368	sulfuric ester hydrolase activity
FOC90_30585	COG0488	(ABC) transporter
FOC90_30590	COG1033	growth of symbiont in host cell
FOC90_30590	COG2409	Drug exporters of the RND superfamily
FOC90_30595	COG1309	transcriptional regulator
FOC90_30610	COG0287	Prephenate dehydrogenase
FOC90_30625	COG1605	Chorismate mutase
FOC90_30625	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FOC90_30660	COG3584	3D domain protein
FOC90_30660	COG1388	LysM domain
FOC90_30690	COG1879	ABC-type sugar transport system periplasmic component
FOC90_30700	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOC90_30710	COG2390	Transcriptional regulator
FOC90_30715	COG1070	Carbohydrate kinase
FOC90_30740	COG2329	Antibiotic biosynthesis monooxygenase
FOC90_30755	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOC90_30770	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC90_30775	COG4187	Peptidase family M20/M25/M40
FOC90_30780	COG1414	Transcriptional regulator
FOC90_30785	COG0833	amino acid
FOC90_30795	COG1690	Belongs to the RtcB family
FOC90_30805	COG3239	Fatty acid desaturase
FOC90_30815	COG2720	vancomycin resistance protein
FOC90_30820	COG1785	Belongs to the alkaline phosphatase family
FOC90_30830	COG3655	Transcriptional regulator
FOC90_30850	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC90_30855	COG0346	lactoylglutathione lyase activity
FOC90_30875	COG0714	Associated with various cellular activities
FOC90_30900	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC90_30905	COG0753	catalase activity
FOC90_30965	COG0778	Nitroreductase
FOC90_30970	COG1846	Transcriptional regulator
FOC90_30990	COG4884	unkown
FOC90_30990	COG3831	ATPase activity
FOC90_31000	COG1136	(ABC) transporter
FOC90_31020	COG2207	Transcriptional regulator
FOC90_31025	COG0456	acetyltransferase
FOC90_31035	COG2816	NAD+ diphosphatase activity
FOC90_31040	COG0697	spore germination
FOC90_31045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_31090	COG0730	response to heat
FOC90_31100	COG0833	amino acid
FOC90_31145	COG1329	Transcriptional regulator
FOC90_31155	COG5002	protein histidine kinase activity
FOC90_31210	COG1984	allophanate hydrolase subunit 2
FOC90_31215	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOC90_31220	COG1414	Transcriptional regulator
FOC90_31235	COG0640	Transcriptional regulator
FOC90_31245	COG1960	acyl-CoA dehydrogenase activity
FOC90_31300	COG0574	Belongs to the PEP-utilizing enzyme family
FOC90_31300	COG3848	Pyruvate phosphate dikinase
FOC90_31305	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC90_31325	COG1063	alcohol dehydrogenase
FOC90_31335	COG1027	Aspartate ammonia-lyase
FOC90_31345	COG1396	sequence-specific DNA binding
FOC90_31375	COG5002	protein histidine kinase activity
FOC90_31580	COG2002	toxin-antitoxin pair type II binding
FOC90_31605	COG3842	ATPase activity
FOC90_31630	COG1136	(ABC) transporter
FOC90_31635	COG0577	efflux transmembrane transporter activity
FOC90_31825	COG4644	lycopene metabolic process
FOC90_31855	COG0697	spore germination
FOC90_31885	COG1923	regulation of RNA biosynthetic process
FOC90_31890	COG2002	toxin-antitoxin pair type II binding
FOC90_31905	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOC90_31910	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC90_31915	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC90_31925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC90_31980	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC90_32085	COG2801	Transposase and inactivated derivatives
FOC90_32255	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair