locus-tag class description AS86_1 PF02463 RecF/RecN/SMC N terminal domain AS86_1 PF06470 SMC proteins Flexible Hinge Domain AS86_10 PF10502 Signal peptidase, peptidase S26 AS86_100 PF17770 Ribonuclease J C-terminal domain AS86_100 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AS86_100 PF00753 Metallo-beta-lactamase superfamily AS86_1001 PF12681 Glyoxalase-like domain AS86_1002 PF13302 Acetyltransferase (GNAT) domain AS86_1006 PF13443 Cro/C1-type HTH DNA-binding domain AS86_1007 PF11188 Protein of unknown function (DUF2975) AS86_1008 PF00245 Alkaline phosphatase AS86_1009 PF04294 VanW like protein AS86_101 PF00574 Clp protease AS86_1010 PF05547 Immune inhibitor A peptidase M6 AS86_1011 PF00487 Fatty acid desaturase AS86_1015 PF00324 Amino acid permease AS86_1016 PF09339 IclR helix-turn-helix domain AS86_1016 PF01614 Bacterial transcriptional regulator AS86_1017 PF01546 Peptidase family M20/M25/M40 AS86_1018 PF03807 NADP oxidoreductase coenzyme F420-dependent AS86_1018 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS86_1019 PF01472 PUA domain AS86_1019 PF00696 Amino acid kinase family AS86_102 PF14035 YlzJ-like protein AS86_1020 PF00171 Aldehyde dehydrogenase family AS86_1021 PF01773 Na+ dependent nucleoside transporter N-terminus AS86_1021 PF07662 Na+ dependent nucleoside transporter C-terminus AS86_1024 PF03992 Antibiotic biosynthesis monooxygenase AS86_1027 PF01791 DeoC/LacD family aldolase AS86_1029 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS86_1029 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS86_103 PF01580 FtsK/SpoIIIE family AS86_103 PF09397 Ftsk gamma domain AS86_103 PF17854 FtsK alpha domain AS86_1030 PF00325 Bacterial regulatory proteins, crp family AS86_1030 PF04198 Putative sugar-binding domain AS86_1031 PF00005 ABC transporter AS86_1032 PF02653 Branched-chain amino acid transport system / permease component AS86_1033 PF02653 Branched-chain amino acid transport system / permease component AS86_1034 PF13407 Periplasmic binding protein domain AS86_1035 PF06039 Malate:quinone oxidoreductase (Mqo) AS86_104 PF00392 Bacterial regulatory proteins, gntR family AS86_104 PF07702 UTRA domain AS86_1041 PF01476 LysM domain AS86_1041 PF06725 3D domain AS86_1044 PF01636 Phosphotransferase enzyme family AS86_1048 PF01817 Chorismate mutase type II AS86_1048 PF00793 DAHP synthetase I family AS86_1049 PF01264 Chorismate synthase AS86_1050 PF00155 Aminotransferase class I and II AS86_1051 PF01842 ACT domain AS86_1051 PF02153 Prephenate dehydrogenase AS86_1052 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS86_1054 PF00440 Bacterial regulatory proteins, tetR family AS86_1054 PF16295 Tetracyclin repressor-like, C-terminal domain AS86_1055 PF03176 MMPL family AS86_1056 PF00005 ABC transporter AS86_1056 PF12848 ABC transporter AS86_1057 PF00884 Sulfatase AS86_1058 PF03741 Integral membrane protein TerC family AS86_1062 PF01522 Polysaccharide deacetylase AS86_1065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_1066 PF00291 Pyridoxal-phosphate dependent enzyme AS86_1067 PF08713 DNA alkylation repair enzyme AS86_1071 PF12867 DinB superfamily AS86_1072 PF13536 Putative multidrug resistance efflux transporter AS86_1074 PF02522 Aminoglycoside 3-N-acetyltransferase AS86_1079 PF00005 ABC transporter AS86_1080 PF09084 NMT1/THI5 like AS86_1081 PF00528 Binding-protein-dependent transport system inner membrane component AS86_1082 PF00296 Luciferase-like monooxygenase AS86_1084 PF01594 AI-2E family transporter AS86_109 PF05193 Peptidase M16 inactive domain AS86_1093 PF03630 Fumble AS86_1094 PF07977 FabA-like domain AS86_1095 PF00155 Aminotransferase class I and II AS86_11 PF01926 50S ribosome-binding GTPase AS86_110 PF00675 Insulinase (Peptidase family M16) AS86_110 PF05193 Peptidase M16 inactive domain AS86_1102 PF08241 Methyltransferase domain AS86_1105 PF04226 Transglycosylase associated protein AS86_1109 PF07690 Major Facilitator Superfamily AS86_1110 PF12793 Sugar transport-related sRNA regulator N-term AS86_1110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_1111 PF13171 Protein of unknown function (DUF4004) AS86_1112 PF04519 Polymer-forming cytoskeletal AS86_1114 PF07690 Major Facilitator Superfamily AS86_112 PF11588 Protein of unknown function (DUF3243) AS86_1121 PF07552 Spore Coat Protein X and V domain AS86_1122 PF02645 Uncharacterised protein, DegV family COG1307 AS86_1123 PF08439 Oligopeptidase F AS86_1123 PF01432 Peptidase family M3 AS86_1124 PF03808 Glycosyl transferase WecB/TagA/CpsF family AS86_1125 PF01048 Phosphorylase superfamily AS86_1128 PF00486 Transcriptional regulatory protein, C terminal AS86_1128 PF00072 Response regulator receiver domain AS86_1129 PF00672 HAMP domain AS86_1129 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_1129 PF00512 His Kinase A (phospho-acceptor) domain AS86_113 PF11868 Protein of unknown function (DUF3388) AS86_1131 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AS86_1131 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AS86_1137 PF01965 DJ-1/PfpI family AS86_1138 PF00248 Aldo/keto reductase family AS86_114 PF13464 Domain of unknown function (DUF4115) AS86_1141 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AS86_1141 PF13378 Enolase C-terminal domain-like AS86_1142 PF00877 NlpC/P60 family AS86_1142 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AS86_1143 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_1144 PF04914 DltD protein AS86_1146 PF09335 SNARE associated Golgi protein AS86_1147 PF08876 Domain of unknown function (DUF1836) AS86_115 PF01066 CDP-alcohol phosphatidyltransferase AS86_1152 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_1152 PF04324 BFD-like [2Fe-2S] binding domain AS86_1154 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_1154 PF04324 BFD-like [2Fe-2S] binding domain AS86_1155 PF00158 Sigma-54 interaction domain AS86_1155 PF13188 PAS domain AS86_1155 PF02954 Bacterial regulatory protein, Fis family AS86_1156 PF01266 FAD dependent oxidoreductase AS86_1157 PF05544 Proline racemase AS86_1158 PF05544 Proline racemase AS86_1159 PF00701 Dihydrodipicolinate synthetase family AS86_116 PF18146 Damage-inducible protein CinA KH domain AS86_116 PF02464 Competence-damaged protein AS86_116 PF00994 Probable molybdopterin binding domain AS86_1160 PF00171 Aldehyde dehydrogenase family AS86_1161 PF01235 Sodium:alanine symporter family AS86_1162 PF02627 Carboxymuconolactone decarboxylase family AS86_1165 PF18416 N-acetylglucosamine binding protein domain 2 AS86_1165 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AS86_1166 PF01368 DHH family AS86_1166 PF02833 DHHA2 domain AS86_117 PF00154 recA bacterial DNA recombination protein AS86_1171 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_1171 PF12123 N-acetylmuramoyl-l-alanine amidase AS86_1176 PF09382 RQC domain AS86_1176 PF16124 RecQ zinc-binding AS86_1176 PF00271 Helicase conserved C-terminal domain AS86_1176 PF00270 DEAD/DEAH box helicase AS86_1176 PF00570 HRDC domain AS86_1179 PF13538 UvrD-like helicase C-terminal domain AS86_118 PF01966 HD domain AS86_118 PF00013 KH domain AS86_118 PF12072 Domain of unknown function (DUF3552) AS86_1180 PF00583 Acetyltransferase (GNAT) family AS86_119 PF13277 YmdB-like protein AS86_1190 PF04237 YjbR AS86_1191 PF08241 Methyltransferase domain AS86_1191 PF12697 Alpha/beta hydrolase family AS86_1192 PF10990 Protein of unknown function (DUF2809) AS86_1194 PF01202 Shikimate kinase AS86_1195 PF03781 Sulfatase-modifying factor enzyme 1 AS86_1196 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS86_1197 PF18416 N-acetylglucosamine binding protein domain 2 AS86_1197 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AS86_12 PF01351 Ribonuclease HII AS86_120 PF04232 Stage V sporulation protein S (SpoVS) AS86_1201 PF13673 Acetyltransferase (GNAT) domain AS86_1202 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AS86_1205 PF00574 Clp protease AS86_1206 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AS86_1207 PF00571 CBS domain AS86_1207 PF00005 ABC transporter AS86_1208 PF00528 Binding-protein-dependent transport system inner membrane component AS86_121 PF01244 Membrane dipeptidase (Peptidase family M19) AS86_1215 PF13673 Acetyltransferase (GNAT) domain AS86_1215 PF04229 GrpB protein AS86_1216 PF00106 short chain dehydrogenase AS86_1219 PF00676 Dehydrogenase E1 component AS86_122 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AS86_122 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AS86_122 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AS86_1220 PF02780 Transketolase, C-terminal domain AS86_1220 PF02779 Transketolase, pyrimidine binding domain AS86_1221 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS86_1221 PF00364 Biotin-requiring enzyme AS86_1221 PF02817 e3 binding domain AS86_1222 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_1222 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS86_1225 PF02082 Transcriptional regulator AS86_1228 PF08220 DeoR-like helix-turn-helix domain AS86_1228 PF00455 DeoR C terminal sensor domain AS86_1229 PF13302 Acetyltransferase (GNAT) domain AS86_123 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS86_1232 PF00158 Sigma-54 interaction domain AS86_1232 PF02954 Bacterial regulatory protein, Fis family AS86_1232 PF01590 GAF domain AS86_1235 PF00293 NUDIX domain AS86_1235 PF13344 Haloacid dehalogenase-like hydrolase AS86_1236 PF00440 Bacterial regulatory proteins, tetR family AS86_1236 PF08359 YsiA-like protein, C-terminal region AS86_1237 PF00266 Aminotransferase class-V AS86_1238 PF04199 Putative cyclase AS86_1239 PF03301 Tryptophan 2,3-dioxygenase AS86_124 PF04055 Radical SAM superfamily AS86_124 PF01938 TRAM domain AS86_124 PF00919 Uncharacterized protein family UPF0004 AS86_1243 PF07486 Cell Wall Hydrolase AS86_1243 PF01471 Putative peptidoglycan binding domain AS86_1244 PF03413 Peptidase propeptide and YPEB domain AS86_1244 PF14620 YpeB sporulation AS86_1245 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AS86_1248 PF06081 Aromatic acid exporter family member 1 AS86_125 PF06133 Control of competence regulator ComK, YlbF/YmcA AS86_1253 PF00561 alpha/beta hydrolase fold AS86_1255 PF00155 Aminotransferase class I and II AS86_1255 PF00392 Bacterial regulatory proteins, gntR family AS86_1256 PF00892 EamA-like transporter family AS86_1257 PF00344 SecY translocase AS86_1258 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_126 PF10628 Outer spore coat protein E (CotE) AS86_1261 PF02872 5'-nucleotidase, C-terminal domain AS86_1261 PF00149 Calcineurin-like phosphoesterase AS86_1262 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS86_1262 PF01447 Thermolysin metallopeptidase, catalytic domain AS86_1262 PF03413 Peptidase propeptide and YPEB domain AS86_1262 PF07504 Fungalysin/Thermolysin Propeptide Motif AS86_1263 PF00128 Alpha amylase, catalytic domain AS86_1263 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS86_1263 PF03714 Bacterial pullanase-associated domain AS86_1265 PF00501 AMP-binding enzyme AS86_1265 PF13193 AMP-binding enzyme C-terminal domain AS86_1265 PF00668 Condensation domain AS86_1265 PF00550 Phosphopantetheine attachment site AS86_1266 PF00282 Pyridoxal-dependent decarboxylase conserved domain AS86_1267 PF07859 alpha/beta hydrolase fold AS86_1269 PF12704 MacB-like periplasmic core domain AS86_1269 PF02687 FtsX-like permease family AS86_127 PF00488 MutS domain V AS86_127 PF05190 MutS family domain IV AS86_127 PF05192 MutS domain III AS86_127 PF05188 MutS domain II AS86_127 PF01624 MutS domain I AS86_1270 PF00005 ABC transporter AS86_1273 PF00989 PAS fold AS86_1273 PF00512 His Kinase A (phospho-acceptor) domain AS86_1273 PF16736 Single Cache-like AS86_1273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_1274 PF00486 Transcriptional regulatory protein, C terminal AS86_1274 PF00072 Response regulator receiver domain AS86_128 PF08676 MutL C terminal dimerisation domain AS86_128 PF01119 DNA mismatch repair protein, C-terminal domain AS86_1280 PF01266 FAD dependent oxidoreductase AS86_1283 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS86_1284 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS86_1286 PF00144 Beta-lactamase AS86_1292 PF01541 GIY-YIG catalytic domain AS86_1294 PF02673 Bacitracin resistance protein BacA AS86_1298 PF12867 DinB superfamily AS86_13 PF00549 CoA-ligase AS86_13 PF08442 ATP-grasp domain AS86_130 PF00350 Dynamin family AS86_1300 PF08000 Bacterial PH domain AS86_1301 PF01734 Patatin-like phospholipase AS86_1305 PF09234 Domain of unknown function (DUF1963) AS86_1308 PF12706 Beta-lactamase superfamily domain AS86_131 PF00884 Sulfatase AS86_1310 PF00293 NUDIX domain AS86_1311 PF00712 DNA polymerase III beta subunit, N-terminal domain AS86_1311 PF02768 DNA polymerase III beta subunit, C-terminal domain AS86_1311 PF02767 DNA polymerase III beta subunit, central domain AS86_1312 PF09297 NADH pyrophosphatase zinc ribbon domain AS86_1312 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AS86_1312 PF00293 NUDIX domain AS86_1314 PF07690 Major Facilitator Superfamily AS86_1318 PF00293 NUDIX domain AS86_1319 PF01784 NIF3 (NGG1p interacting factor 3) AS86_1321 PF01156 Inosine-uridine preferring nucleoside hydrolase AS86_1322 PF01270 Glycosyl hydrolases family 8 AS86_1323 PF00892 EamA-like transporter family AS86_1324 PF00155 Aminotransferase class I and II AS86_1324 PF00392 Bacterial regulatory proteins, gntR family AS86_1328 PF03009 Glycerophosphoryl diester phosphodiesterase family AS86_133 PF07486 Cell Wall Hydrolase AS86_1333 PF07690 Major Facilitator Superfamily AS86_134 PF00082 Subtilase family AS86_1343 PF01569 PAP2 superfamily AS86_1344 PF08240 Alcohol dehydrogenase GroES-like domain AS86_1344 PF00107 Zinc-binding dehydrogenase AS86_1348 PF00293 NUDIX domain AS86_1348 PF13344 Haloacid dehalogenase-like hydrolase AS86_135 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AS86_1350 PF12833 Helix-turn-helix domain AS86_1350 PF02805 Metal binding domain of Ada AS86_1352 PF01609 Transposase DDE domain AS86_1354 PF01609 Transposase DDE domain AS86_136 PF00672 HAMP domain AS86_136 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_1363 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_1363 PF00512 His Kinase A (phospho-acceptor) domain AS86_1366 PF00005 ABC transporter AS86_1366 PF12558 ATP-binding cassette cobalt transporter AS86_1367 PF07155 ECF-type riboflavin transporter, S component AS86_1373 PF11588 Protein of unknown function (DUF3243) AS86_1375 PF01370 NAD dependent epimerase/dehydratase family AS86_1375 PF08338 Domain of unknown function (DUF1731) AS86_1377 PF13333 Integrase core domain AS86_1377 PF00665 Integrase core domain AS86_1377 PF13276 HTH-like domain AS86_1379 PF04070 Domain of unknown function (DUF378) AS86_138 PF00392 Bacterial regulatory proteins, gntR family AS86_138 PF00155 Aminotransferase class I and II AS86_1381 PF02627 Carboxymuconolactone decarboxylase family AS86_1382 PF03073 TspO/MBR family AS86_1383 PF00875 DNA photolyase AS86_1383 PF03441 FAD binding domain of DNA photolyase AS86_1385 PF07690 Major Facilitator Superfamily AS86_1388 PF01022 Bacterial regulatory protein, arsR family AS86_139 PF03788 LrgA family AS86_1390 PF18419 ATP-grasp-like domain AS86_1390 PF02655 ATP-grasp domain AS86_1390 PF04262 Glutamate-cysteine ligase AS86_1392 PF00756 Putative esterase AS86_1393 PF08240 Alcohol dehydrogenase GroES-like domain AS86_1393 PF00107 Zinc-binding dehydrogenase AS86_1394 PF01638 HxlR-like helix-turn-helix AS86_1398 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_1398 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS86_1399 PF16925 Tetracyclin repressor-like, C-terminal domain AS86_1399 PF00440 Bacterial regulatory proteins, tetR family AS86_14 PF00549 CoA-ligase AS86_14 PF02629 CoA binding domain AS86_140 PF04172 LrgB-like family AS86_1400 PF14470 Bacterial PH domain AS86_1405 PF02559 CarD-like/TRCF domain AS86_1408 PF07883 Cupin domain AS86_141 PF10787 Uncharacterised protein from bacillus cereus group AS86_1417 PF00589 Phage integrase family AS86_1417 PF02899 Phage integrase, N-terminal SAM-like domain AS86_1418 PF07155 ECF-type riboflavin transporter, S component AS86_1419 PF01177 Asp/Glu/Hydantoin racemase AS86_1420 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS86_1421 PF10502 Signal peptidase, peptidase S26 AS86_1423 PF00512 His Kinase A (phospho-acceptor) domain AS86_1423 PF13188 PAS domain AS86_1423 PF13426 PAS domain AS86_1423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_1423 PF00989 PAS fold AS86_1426 PF00067 Cytochrome P450 AS86_1428 PF07561 Domain of Unknown Function (DUF1540) AS86_1429 PF00132 Bacterial transferase hexapeptide (six repeats) AS86_143 PF08485 Polysaccharide biosynthesis protein C-terminal AS86_143 PF02719 Polysaccharide biosynthesis protein AS86_1431 PF00067 Cytochrome P450 AS86_144 PF16363 GDP-mannose 4,6 dehydratase AS86_1442 PF03070 TENA/THI-4/PQQC family AS86_1443 PF01820 D-ala D-ala ligase N-terminus AS86_1443 PF07478 D-ala D-ala ligase C-terminus AS86_1444 PF00392 Bacterial regulatory proteins, gntR family AS86_1444 PF00155 Aminotransferase class I and II AS86_1445 PF00742 Homoserine dehydrogenase AS86_1445 PF03447 Homoserine dehydrogenase, NAD binding domain AS86_1449 PF02687 FtsX-like permease family AS86_1450 PF00005 ABC transporter AS86_1454 PF00248 Aldo/keto reductase family AS86_1455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_1455 PF03466 LysR substrate binding domain AS86_1456 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_1457 PF00486 Transcriptional regulatory protein, C terminal AS86_1457 PF00072 Response regulator receiver domain AS86_1459 PF07486 Cell Wall Hydrolase AS86_146 PF04101 Glycosyltransferase family 28 C-terminal domain AS86_146 PF03033 Glycosyltransferase family 28 N-terminal domain AS86_1460 PF01921 tRNA synthetases class I (K) AS86_1462 PF08450 SMP-30/Gluconolactonase/LRE-like region AS86_1464 PF01965 DJ-1/PfpI family AS86_1465 PF08241 Methyltransferase domain AS86_1467 PF04239 Protein of unknown function (DUF421) AS86_147 PF00563 EAL domain AS86_147 PF03707 Bacterial signalling protein N terminal repeat AS86_147 PF00990 Diguanylate cyclase, GGDEF domain AS86_1472 PF00155 Aminotransferase class I and II AS86_1472 PF00392 Bacterial regulatory proteins, gntR family AS86_1475 PF12833 Helix-turn-helix domain AS86_1476 PF01636 Phosphotransferase enzyme family AS86_148 PF00561 alpha/beta hydrolase fold AS86_1481 PF01638 HxlR-like helix-turn-helix AS86_1483 PF09278 MerR, DNA binding AS86_1483 PF00376 MerR family regulatory protein AS86_1484 PF17760 UvrA interaction domain AS86_1484 PF17755 UvrA DNA-binding domain AS86_1484 PF00005 ABC transporter AS86_1490 PF12833 Helix-turn-helix domain AS86_1490 PF17853 GGDEF-like domain AS86_1491 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS86_1491 PF01447 Thermolysin metallopeptidase, catalytic domain AS86_1491 PF03413 Peptidase propeptide and YPEB domain AS86_1491 PF07504 Fungalysin/Thermolysin Propeptide Motif AS86_1495 PF01048 Phosphorylase superfamily AS86_1498 PF01966 HD domain AS86_1499 PF00072 Response regulator receiver domain AS86_1499 PF00486 Transcriptional regulatory protein, C terminal AS86_15 PF02481 DNA recombination-mediator protein A AS86_1500 PF00512 His Kinase A (phospho-acceptor) domain AS86_1500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_1501 PF07943 Penicillin-binding protein 5, C-terminal domain AS86_1501 PF00768 D-alanyl-D-alanine carboxypeptidase AS86_1507 PF16177 Acetyl-coenzyme A synthetase N-terminus AS86_1507 PF13193 AMP-binding enzyme C-terminal domain AS86_1507 PF00501 AMP-binding enzyme AS86_1508 PF01039 Carboxyl transferase domain AS86_1509 PF00378 Enoyl-CoA hydratase/isomerase AS86_1510 PF00682 HMGL-like AS86_1511 PF00364 Biotin-requiring enzyme AS86_1512 PF02785 Biotin carboxylase C-terminal domain AS86_1512 PF00289 Biotin carboxylase, N-terminal domain AS86_1512 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS86_1513 PF02770 Acyl-CoA dehydrogenase, middle domain AS86_1513 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS86_1513 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS86_1516 PF08359 YsiA-like protein, C-terminal region AS86_1516 PF00440 Bacterial regulatory proteins, tetR family AS86_152 PF07687 Peptidase dimerisation domain AS86_152 PF01546 Peptidase family M20/M25/M40 AS86_1521 PF00149 Calcineurin-like phosphoesterase AS86_1524 PF13276 HTH-like domain AS86_1524 PF00665 Integrase core domain AS86_1524 PF13333 Integrase core domain AS86_1528 PF04542 Sigma-70 region 2 AS86_1528 PF08281 Sigma-70, region 4 AS86_1529 PF03717 Penicillin-binding Protein dimerisation domain AS86_1529 PF05223 NTF2-like N-terminal transpeptidase domain AS86_1529 PF00905 Penicillin binding protein transpeptidase domain AS86_153 PF00730 HhH-GPD superfamily base excision DNA repair protein AS86_153 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AS86_1537 PF01522 Polysaccharide deacetylase AS86_1539 PF01381 Helix-turn-helix AS86_154 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS86_154 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS86_1540 PF00395 S-layer homology domain AS86_1540 PF01520 N-acetylmuramoyl-L-alanine amidase AS86_1543 PF01022 Bacterial regulatory protein, arsR family AS86_1547 PF07690 Major Facilitator Superfamily AS86_1548 PF02225 PA domain AS86_1548 PF04389 Peptidase family M28 AS86_155 PF12833 Helix-turn-helix domain AS86_155 PF02805 Metal binding domain of Ada AS86_1550 PF02585 GlcNAc-PI de-N-acetylase AS86_1551 PF08889 WbqC-like protein family AS86_1553 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS86_1554 PF01370 NAD dependent epimerase/dehydratase family AS86_1555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS86_1556 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS86_1556 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS86_1556 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS86_1557 PF00583 Acetyltransferase (GNAT) family AS86_1559 PF13302 Acetyltransferase (GNAT) domain AS86_156 PF03372 Endonuclease/Exonuclease/phosphatase family AS86_1569 PF00975 Thioesterase domain AS86_157 PF01497 Periplasmic binding protein AS86_1570 PF01648 4'-phosphopantetheinyl transferase superfamily AS86_1571 PF00550 Phosphopantetheine attachment site AS86_1571 PF00668 Condensation domain AS86_1571 PF13193 AMP-binding enzyme C-terminal domain AS86_1571 PF00501 AMP-binding enzyme AS86_1572 PF00501 AMP-binding enzyme AS86_1572 PF13193 AMP-binding enzyme C-terminal domain AS86_1572 PF00550 Phosphopantetheine attachment site AS86_1572 PF07993 Male sterility protein AS86_1572 PF00668 Condensation domain AS86_1573 PF00668 Condensation domain AS86_1573 PF00501 AMP-binding enzyme AS86_1573 PF00550 Phosphopantetheine attachment site AS86_1573 PF13193 AMP-binding enzyme C-terminal domain AS86_1574 PF07690 Major Facilitator Superfamily AS86_1577 PF07943 Penicillin-binding protein 5, C-terminal domain AS86_1577 PF00768 D-alanyl-D-alanine carboxypeptidase AS86_1578 PF00132 Bacterial transferase hexapeptide (six repeats) AS86_1579 PF01925 Sulfite exporter TauE/SafE AS86_158 PF01032 FecCD transport family AS86_1581 PF18277 AbrB C-terminal domain AS86_1581 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AS86_1584 PF00196 Bacterial regulatory proteins, luxR family AS86_1584 PF00072 Response regulator receiver domain AS86_1587 PF07687 Peptidase dimerisation domain AS86_1587 PF01546 Peptidase family M20/M25/M40 AS86_159 PF01032 FecCD transport family AS86_1591 PF14171 Toxin SpoIISA, type II toxin-antitoxin system AS86_1592 PF00300 Histidine phosphatase superfamily (branch 1) AS86_1594 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS86_1594 PF00205 Thiamine pyrophosphate enzyme, central domain AS86_1594 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS86_1595 PF08241 Methyltransferase domain AS86_1597 PF03848 Tellurite resistance protein TehB AS86_1597 PF09313 Domain of unknown function (DUF1971) AS86_1598 PF00270 DEAD/DEAH box helicase AS86_1598 PF00271 Helicase conserved C-terminal domain AS86_16 PF01751 Toprim domain AS86_16 PF01396 Topoisomerase DNA binding C4 zinc finger AS86_16 PF01131 DNA topoisomerase AS86_160 PF00005 ABC transporter AS86_1600 PF16123 Hydroxyacylglutathione hydrolase C-terminus AS86_1600 PF00753 Metallo-beta-lactamase superfamily AS86_1602 PF07690 Major Facilitator Superfamily AS86_1603 PF01047 MarR family AS86_1604 PF00291 Pyridoxal-phosphate dependent enzyme AS86_1605 PF00266 Aminotransferase class-V AS86_1606 PF02660 Glycerol-3-phosphate acyltransferase AS86_1607 PF01869 BadF/BadG/BcrA/BcrD ATPase family AS86_1608 PF03702 Anhydro-N-acetylmuramic acid kinase AS86_161 PF00756 Putative esterase AS86_1610 PF02378 Phosphotransferase system, EIIC AS86_1612 PF02638 Glycosyl hydrolase-like 10 AS86_1617 PF08281 Sigma-70, region 4 AS86_1617 PF04542 Sigma-70 region 2 AS86_1617 PF12680 SnoaL-like domain AS86_1618 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS86_1618 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_1624 PF07883 Cupin domain AS86_1624 PF01381 Helix-turn-helix AS86_1625 PF01810 LysE type translocator AS86_1630 PF00005 ABC transporter AS86_1630 PF00664 ABC transporter transmembrane region AS86_1631 PF00005 ABC transporter AS86_1631 PF00664 ABC transporter transmembrane region AS86_1634 PF03473 MOSC domain AS86_1634 PF03475 3-alpha domain AS86_1635 PF03466 LysR substrate binding domain AS86_1635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_1637 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS86_1637 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS86_1638 PF03466 LysR substrate binding domain AS86_1638 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_1642 PF00313 'Cold-shock' DNA-binding domain AS86_1644 PF13302 Acetyltransferase (GNAT) domain AS86_165 PF02583 Metal-sensitive transcriptional repressor AS86_1651 PF00583 Acetyltransferase (GNAT) family AS86_1654 PF00302 Chloramphenicol acetyltransferase AS86_1656 PF03176 MMPL family AS86_1658 PF16123 Hydroxyacylglutathione hydrolase C-terminus AS86_1658 PF00753 Metallo-beta-lactamase superfamily AS86_166 PF00403 Heavy-metal-associated domain AS86_1660 PF00561 alpha/beta hydrolase fold AS86_1662 PF00027 Cyclic nucleotide-binding domain AS86_167 PF00403 Heavy-metal-associated domain AS86_1670 PF00005 ABC transporter AS86_1671 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS86_1671 PF03129 Anticodon binding domain AS86_1671 PF02824 TGS domain AS86_1671 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS86_1672 PF01479 S4 domain AS86_1672 PF00849 RNA pseudouridylate synthase AS86_1676 PF01235 Sodium:alanine symporter family AS86_1677 PF00082 Subtilase family AS86_1678 PF05163 DinB family AS86_1680 PF00216 Bacterial DNA-binding protein AS86_1683 PF07690 Major Facilitator Superfamily AS86_1684 PF03621 MbtH-like protein AS86_1685 PF00975 Thioesterase domain AS86_1685 PF00501 AMP-binding enzyme AS86_1685 PF13193 AMP-binding enzyme C-terminal domain AS86_1685 PF00550 Phosphopantetheine attachment site AS86_1685 PF00668 Condensation domain AS86_1686 PF00550 Phosphopantetheine attachment site AS86_1686 PF00857 Isochorismatase family AS86_1687 PF13193 AMP-binding enzyme C-terminal domain AS86_1687 PF00501 AMP-binding enzyme AS86_1688 PF00425 chorismate binding enzyme AS86_1689 PF00106 short chain dehydrogenase AS86_169 PF00216 Bacterial DNA-binding protein AS86_1690 PF07690 Major Facilitator Superfamily AS86_1692 PF01022 Bacterial regulatory protein, arsR family AS86_1694 PF13476 AAA domain AS86_1695 PF00149 Calcineurin-like phosphoesterase AS86_1695 PF12320 Type 5 capsule protein repressor C-terminal domain AS86_1698 PF00378 Enoyl-CoA hydratase/isomerase AS86_1699 PF01810 LysE type translocator AS86_17 PF01134 Glucose inhibited division protein A AS86_170 PF01226 Formate/nitrite transporter AS86_1700 PF00171 Aldehyde dehydrogenase family AS86_1701 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS86_1701 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS86_1702 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS86_1702 PF02770 Acyl-CoA dehydrogenase, middle domain AS86_1702 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS86_1704 PF03972 MmgE/PrpD family AS86_1705 PF00285 Citrate synthase, C-terminal domain AS86_1706 PF01521 Iron-sulphur cluster biosynthesis AS86_1707 PF07690 Major Facilitator Superfamily AS86_1709 PF00912 Transglycosylase AS86_1709 PF00905 Penicillin binding protein transpeptidase domain AS86_171 PF00149 Calcineurin-like phosphoesterase AS86_171 PF10518 TAT (twin-arginine translocation) pathway signal sequence AS86_1713 PF00106 short chain dehydrogenase AS86_1715 PF10676 Spore germination protein gerPA/gerPF AS86_1728 PF00085 Thioredoxin AS86_1729 PF01569 PAP2 superfamily AS86_173 PF00041 Fibronectin type III domain AS86_173 PF00704 Glycosyl hydrolases family 18 AS86_1730 PF01545 Cation efflux family AS86_1730 PF16916 Dimerisation domain of Zinc Transporter AS86_1732 PF08239 Bacterial SH3 domain AS86_1732 PF00069 Protein kinase domain AS86_1734 PF14162 YozD-like protein AS86_1737 PF06855 YozE SAM-like fold AS86_1738 PF14122 YokU-like protein, putative antitoxin AS86_1739 PF12544 Lysine-2,3-aminomutase AS86_174 PF00324 Amino acid permease AS86_1740 PF00158 Sigma-54 interaction domain AS86_1740 PF02954 Bacterial regulatory protein, Fis family AS86_1740 PF13426 PAS domain AS86_1741 PF00583 Acetyltransferase (GNAT) family AS86_1742 PF07687 Peptidase dimerisation domain AS86_1742 PF01546 Peptidase family M20/M25/M40 AS86_1743 PF01144 Coenzyme A transferase AS86_1744 PF01144 Coenzyme A transferase AS86_1745 PF00202 Aminotransferase class-III AS86_1747 PF09385 Histidine kinase N terminal AS86_1748 PF07997 Protein of unknown function (DUF1694) AS86_1749 PF00171 Aldehyde dehydrogenase family AS86_1750 PF03471 Transporter associated domain AS86_1750 PF00571 CBS domain AS86_1750 PF01595 Cyclin M transmembrane N-terminal domain AS86_1756 PF13520 Amino acid permease AS86_1757 PF00528 Binding-protein-dependent transport system inner membrane component AS86_1758 PF00005 ABC transporter AS86_1758 PF00571 CBS domain AS86_1761 PF03358 NADPH-dependent FMN reductase AS86_1764 PF10924 Protein of unknown function (DUF2711) AS86_1765 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AS86_1765 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS86_1766 PF02447 GntP family permease AS86_1767 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS86_1767 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS86_177 PF04238 Protein of unknown function (DUF420) AS86_1771 PF00107 Zinc-binding dehydrogenase AS86_1771 PF08240 Alcohol dehydrogenase GroES-like domain AS86_1772 PF02567 Phenazine biosynthesis-like protein AS86_1773 PF01380 SIS domain AS86_1773 PF01418 Helix-turn-helix domain, rpiR family AS86_1774 PF00072 Response regulator receiver domain AS86_1774 PF00196 Bacterial regulatory proteins, luxR family AS86_1775 PF07730 Histidine kinase AS86_1775 PF13185 GAF domain AS86_1776 PF00924 Mechanosensitive ion channel AS86_1777 PF00293 NUDIX domain AS86_1778 PF00857 Isochorismatase family AS86_178 PF00465 Iron-containing alcohol dehydrogenase AS86_1780 PF00881 Nitroreductase family AS86_1781 PF01063 Amino-transferase class IV AS86_1782 PF01497 Periplasmic binding protein AS86_1783 PF05036 Sporulation related domain AS86_1783 PF01520 N-acetylmuramoyl-L-alanine amidase AS86_1786 PF13537 Glutamine amidotransferase domain AS86_1786 PF00733 Asparagine synthase AS86_1787 PF00011 Hsp20/alpha crystallin family AS86_1788 PF02630 SCO1/SenC AS86_179 PF08220 DeoR-like helix-turn-helix domain AS86_179 PF00455 DeoR C terminal sensor domain AS86_1790 PF02645 Uncharacterised protein, DegV family COG1307 AS86_1792 PF00902 Sec-independent protein translocase protein (TatC) AS86_1793 PF02416 mttA/Hcf106 family AS86_1794 PF03006 Haemolysin-III related AS86_1795 PF01553 Acyltransferase AS86_1796 PF02525 Flavodoxin-like fold AS86_1797 PF05223 NTF2-like N-terminal transpeptidase domain AS86_1797 PF03717 Penicillin-binding Protein dimerisation domain AS86_1797 PF00905 Penicillin binding protein transpeptidase domain AS86_1798 PF00186 Dihydrofolate reductase AS86_1799 PF00303 Thymidylate synthase AS86_18 PF00589 Phage integrase family AS86_18 PF02899 Phage integrase, N-terminal SAM-like domain AS86_180 PF00294 pfkB family carbohydrate kinase AS86_1800 PF00144 Beta-lactamase AS86_1803 PF13419 Haloacid dehalogenase-like hydrolase AS86_1804 PF14005 YpjP-like protein AS86_1806 PF00005 ABC transporter AS86_1808 PF08645 Polynucleotide kinase 3 phosphatase AS86_1809 PF13443 Cro/C1-type HTH DNA-binding domain AS86_181 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS86_181 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS86_1810 PF00583 Acetyltransferase (GNAT) family AS86_1811 PF01980 tRNA-methyltransferase O AS86_1812 PF01177 Asp/Glu/Hydantoin racemase AS86_1813 PF00465 Iron-containing alcohol dehydrogenase AS86_1815 PF13419 Haloacid dehalogenase-like hydrolase AS86_1816 PF10997 Alternate to MurJ AS86_1818 PF00561 alpha/beta hydrolase fold AS86_1819 PF00209 Sodium:neurotransmitter symporter family AS86_182 PF01476 LysM domain AS86_182 PF06725 3D domain AS86_1820 PF00152 tRNA synthetases class II (D, K and N) AS86_1820 PF01336 OB-fold nucleic acid binding domain AS86_1823 PF00133 tRNA synthetases class I (I, L, M and V) AS86_1823 PF08264 Anticodon-binding domain of tRNA AS86_1828 PF00750 tRNA synthetases class I (R) AS86_1828 PF05746 DALR anticodon binding domain AS86_1828 PF03485 Arginyl tRNA synthetase N terminal domain AS86_1829 PF04445 Putative SAM-dependent methyltransferase AS86_1830 PF06491 Disulphide isomerase AS86_1832 PF08712 Scaffold protein Nfu/NifU N terminal AS86_1832 PF13769 Virulence factor AS86_1834 PF00436 Single-strand binding protein family AS86_1837 PF16326 ABC transporter C-terminal domain AS86_1837 PF12848 ABC transporter AS86_1837 PF00005 ABC transporter AS86_1838 PF01966 HD domain AS86_1841 PF18801 response regulator aspartate phosphatase H, N terminal AS86_1841 PF17874 MalT-like TPR region AS86_1845 PF04232 Stage V sporulation protein S (SpoVS) AS86_185 PF17209 Hfq protein AS86_1852 PF01814 Hemerythrin HHE cation binding domain AS86_1852 PF04405 Domain of Unknown function (DUF542) AS86_1853 PF04324 BFD-like [2Fe-2S] binding domain AS86_1853 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS86_1853 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS86_1853 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_1853 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS86_1854 PF00355 Rieske [2Fe-2S] domain AS86_1855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS86_1856 PF01903 CbiX AS86_1860 PF07690 Major Facilitator Superfamily AS86_1862 PF02391 MoaE protein AS86_1863 PF03454 MoeA C-terminal region (domain IV) AS86_1863 PF00994 Probable molybdopterin binding domain AS86_1863 PF03453 MoeA N-terminal region (domain I and II) AS86_1864 PF00899 ThiF family AS86_1865 PF06463 Molybdenum Cofactor Synthesis C AS86_1865 PF04055 Radical SAM superfamily AS86_1866 PF00325 Bacterial regulatory proteins, crp family AS86_1866 PF00027 Cyclic nucleotide-binding domain AS86_1867 PF02665 Nitrate reductase gamma subunit AS86_1868 PF02613 Nitrate reductase delta subunit AS86_1869 PF13247 4Fe-4S dicluster domain AS86_1869 PF14711 Respiratory nitrate reductase beta C-terminal AS86_1870 PF00384 Molybdopterin oxidoreductase AS86_1870 PF01568 Molydopterin dinucleotide binding domain AS86_1870 PF14710 Respiratory nitrate reductase alpha N-terminal AS86_1871 PF07726 ATPase family associated with various cellular activities (AAA) AS86_1871 PF17863 AAA lid domain AS86_1872 PF01882 Protein of unknown function DUF58 AS86_1873 PF01841 Transglutaminase-like superfamily AS86_1873 PF11992 Domain of unknown function (DUF3488) AS86_1873 PF13559 Domain of unknown function (DUF4129) AS86_1874 PF00255 Glutathione peroxidase AS86_1876 PF01613 Flavin reductase like domain AS86_1876 PF00258 Flavodoxin AS86_1878 PF03109 ABC1 family AS86_188 PF00004 ATPase family associated with various cellular activities (AAA) AS86_188 PF17866 AAA lid domain AS86_1880 PF08281 Sigma-70, region 4 AS86_1880 PF04542 Sigma-70 region 2 AS86_1881 PF00107 Zinc-binding dehydrogenase AS86_1881 PF08240 Alcohol dehydrogenase GroES-like domain AS86_1883 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_1884 PF01261 Xylose isomerase-like TIM barrel AS86_1885 PF00270 DEAD/DEAH box helicase AS86_1885 PF00271 Helicase conserved C-terminal domain AS86_1887 PF01268 Formate--tetrahydrofolate ligase AS86_1888 PF01209 ubiE/COQ5 methyltransferase family AS86_1893 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AS86_1895 PF02899 Phage integrase, N-terminal SAM-like domain AS86_1895 PF00589 Phage integrase family AS86_19 PF00227 Proteasome subunit AS86_190 PF03458 UPF0126 domain AS86_191 PF13167 GTP-binding GTPase N-terminal AS86_191 PF16360 GTP-binding GTPase Middle Region AS86_191 PF01926 50S ribosome-binding GTPase AS86_1919 PF12538 DNA transporter AS86_1919 PF01580 FtsK/SpoIIIE family AS86_192 PF06838 Methionine gamma-lyase AS86_1920 PF10140 WXG100 protein secretion system (Wss), protein YukC AS86_1921 PF08817 WXG100 protein secretion system (Wss), protein YukD AS86_1924 PF06013 Proteins of 100 residues with WXG AS86_1928 PF00583 Acetyltransferase (GNAT) family AS86_193 PF13411 MerR HTH family regulatory protein AS86_1934 PF00392 Bacterial regulatory proteins, gntR family AS86_1934 PF00155 Aminotransferase class I and II AS86_1935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_1935 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_1936 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS86_194 PF00120 Glutamine synthetase, catalytic domain AS86_194 PF03951 Glutamine synthetase, beta-Grasp domain AS86_1940 PF00842 Alanine racemase, C-terminal domain AS86_1940 PF01168 Alanine racemase, N-terminal domain AS86_1942 PF07690 Major Facilitator Superfamily AS86_1943 PF01047 MarR family AS86_1946 PF07454 Stage II sporulation protein P (SpoIIP) AS86_1947 PF01145 SPFH domain / Band 7 family AS86_1949 PF07690 Major Facilitator Superfamily AS86_195 PF00717 Peptidase S24-like AS86_195 PF01726 LexA DNA binding domain AS86_1950 PF01425 Amidase AS86_1952 PF02557 D-alanyl-D-alanine carboxypeptidase AS86_1954 PF07454 Stage II sporulation protein P (SpoIIP) AS86_1957 PF01588 Putative tRNA binding domain AS86_1958 PF05525 Branched-chain amino acid transport protein AS86_1963 PF01595 Cyclin M transmembrane N-terminal domain AS86_1963 PF00571 CBS domain AS86_1963 PF03471 Transporter associated domain AS86_1964 PF04306 Protein of unknown function (DUF456) AS86_1965 PF13460 NAD(P)H-binding AS86_1968 PF13091 PLD-like domain AS86_1968 PF13396 Phospholipase_D-nuclease N-terminal AS86_1969 PF03061 Thioesterase superfamily AS86_1970 PF09323 Domain of unknown function (DUF1980) AS86_1971 PF03773 Predicted permease AS86_1973 PF14667 Polysaccharide biosynthesis C-terminal domain AS86_1973 PF01943 Polysaccharide biosynthesis protein AS86_1974 PF09335 SNARE associated Golgi protein AS86_1975 PF00293 NUDIX domain AS86_1976 PF08757 CotH kinase protein AS86_1978 PF00300 Histidine phosphatase superfamily (branch 1) AS86_1980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_1981 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_1983 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS86_1983 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS86_1984 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS86_1985 PF13460 NAD(P)H-binding AS86_1987 PF01297 Zinc-uptake complex component A periplasmic AS86_1988 PF00583 Acetyltransferase (GNAT) family AS86_1989 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS86_1989 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS86_1990 PF00248 Aldo/keto reductase family AS86_1991 PF13302 Acetyltransferase (GNAT) domain AS86_1992 PF01593 Flavin containing amine oxidoreductase AS86_1994 PF00296 Luciferase-like monooxygenase AS86_1997 PF00210 Ferritin-like domain AS86_2 PF00448 SRP54-type protein, GTPase domain AS86_2 PF02881 SRP54-type protein, helical bundle domain AS86_20 PF10431 C-terminal, D2-small domain, of ClpB protein AS86_20 PF00004 ATPase family associated with various cellular activities (AAA) AS86_20 PF07724 AAA domain (Cdc48 subfamily) AS86_2001 PF02743 Cache domain AS86_2001 PF00672 HAMP domain AS86_2001 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_2002 PF03193 RsgA GTPase AS86_2007 PF00248 Aldo/keto reductase family AS86_2008 PF01022 Bacterial regulatory protein, arsR family AS86_2009 PF00082 Subtilase family AS86_2010 PF18277 AbrB C-terminal domain AS86_2010 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AS86_2011 PF02687 FtsX-like permease family AS86_2012 PF02687 FtsX-like permease family AS86_2013 PF02540 NAD synthase AS86_2014 PF13344 Haloacid dehalogenase-like hydrolase AS86_2014 PF00293 NUDIX domain AS86_2018 PF01734 Patatin-like phospholipase AS86_2020 PF00155 Aminotransferase class I and II AS86_2020 PF00392 Bacterial regulatory proteins, gntR family AS86_2021 PF01810 LysE type translocator AS86_2022 PF07690 Major Facilitator Superfamily AS86_2023 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS86_2024 PF01261 Xylose isomerase-like TIM barrel AS86_2027 PF13193 AMP-binding enzyme C-terminal domain AS86_2027 PF00501 AMP-binding enzyme AS86_2028 PF04183 IucA / IucC family AS86_2028 PF06276 Ferric iron reductase FhuF-like transporter AS86_2029 PF06276 Ferric iron reductase FhuF-like transporter AS86_2029 PF04183 IucA / IucC family AS86_203 PF10145 Phage-related minor tail protein AS86_203 PF01551 Peptidase family M23 AS86_203 PF01464 Transglycosylase SLT domain AS86_2030 PF00583 Acetyltransferase (GNAT) family AS86_2031 PF02308 MgtC family AS86_2033 PF01522 Polysaccharide deacetylase AS86_2034 PF03816 Cell envelope-related transcriptional attenuator domain AS86_2037 PF08544 GHMP kinases C terminal AS86_2037 PF00288 GHMP kinases N terminal domain AS86_2038 PF00291 Pyridoxal-phosphate dependent enzyme AS86_2039 PF00742 Homoserine dehydrogenase AS86_2039 PF01842 ACT domain AS86_2039 PF03447 Homoserine dehydrogenase, NAD binding domain AS86_2043 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain AS86_2043 PF01522 Polysaccharide deacetylase AS86_2044 PF04439 Streptomycin adenylyltransferase AS86_2047 PF00106 short chain dehydrogenase AS86_2048 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2048 PF00512 His Kinase A (phospho-acceptor) domain AS86_2048 PF00989 PAS fold AS86_2048 PF16736 Single Cache-like AS86_2049 PF00486 Transcriptional regulatory protein, C terminal AS86_2049 PF00072 Response regulator receiver domain AS86_205 PF03551 Transcriptional regulator PadR-like family AS86_2050 PF00664 ABC transporter transmembrane region AS86_2050 PF00005 ABC transporter AS86_2052 PF00877 NlpC/P60 family AS86_2052 PF01476 LysM domain AS86_2055 PF00768 D-alanyl-D-alanine carboxypeptidase AS86_2055 PF07943 Penicillin-binding protein 5, C-terminal domain AS86_2056 PF17676 LD-carboxypeptidase C-terminal domain AS86_2056 PF02016 LD-carboxypeptidase N-terminal domain AS86_2061 PF00132 Bacterial transferase hexapeptide (six repeats) AS86_2062 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS86_2063 PF00535 Glycosyl transferase family 2 AS86_2065 PF00005 ABC transporter AS86_2065 PF00664 ABC transporter transmembrane region AS86_2066 PF00005 ABC transporter AS86_2066 PF00664 ABC transporter transmembrane region AS86_2067 PF02322 Cytochrome bd terminal oxidase subunit II AS86_2068 PF01654 Cytochrome bd terminal oxidase subunit I AS86_2070 PF01047 MarR family AS86_2075 PF03466 LysR substrate binding domain AS86_2075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_2077 PF02653 Branched-chain amino acid transport system / permease component AS86_2078 PF00005 ABC transporter AS86_2079 PF12399 Branched-chain amino acid ATP-binding cassette transporter AS86_2079 PF00005 ABC transporter AS86_208 PF01726 LexA DNA binding domain AS86_208 PF00717 Peptidase S24-like AS86_2081 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS86_2081 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS86_2082 PF01593 Flavin containing amine oxidoreductase AS86_2083 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS86_2083 PF00056 lactate/malate dehydrogenase, NAD binding domain AS86_2084 PF01594 AI-2E family transporter AS86_2085 PF01425 Amidase AS86_2087 PF00881 Nitroreductase family AS86_2088 PF01323 DSBA-like thioredoxin domain AS86_2089 PF02082 Transcriptional regulator AS86_209 PF00239 Resolvase, N terminal domain AS86_2090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_2090 PF03466 LysR substrate binding domain AS86_2091 PF00892 EamA-like transporter family AS86_2092 PF07987 Domain of unkown function (DUF1775) AS86_2093 PF04234 CopC domain AS86_2093 PF13115 YtkA-like AS86_2093 PF05425 Copper resistance protein D AS86_2094 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_2095 PF05525 Branched-chain amino acid transport protein AS86_2096 PF02525 Flavodoxin-like fold AS86_21 PF08222 CodY helix-turn-helix domain AS86_21 PF06018 CodY GAF-like domain AS86_210 PF05979 Bacterial protein of unknown function (DUF896) AS86_2102 PF07731 Multicopper oxidase AS86_2102 PF00394 Multicopper oxidase AS86_2102 PF07732 Multicopper oxidase AS86_2104 PF05195 Aminopeptidase P, N-terminal domain AS86_2104 PF00557 Metallopeptidase family M24 AS86_2105 PF05979 Bacterial protein of unknown function (DUF896) AS86_2106 PF07301 Protein of unknown function (DUF1453) AS86_211 PF00149 Calcineurin-like phosphoesterase AS86_211 PF02872 5'-nucleotidase, C-terminal domain AS86_2111 PF14436 Bacterial EndoU nuclease AS86_2111 PF04740 LXG domain of WXG superfamily AS86_2114 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS86_2115 PF02885 Glycosyl transferase family, helical bundle domain AS86_2115 PF00591 Glycosyl transferase family, a/b domain AS86_2115 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AS86_2116 PF01773 Na+ dependent nucleoside transporter N-terminus AS86_2116 PF07662 Na+ dependent nucleoside transporter C-terminus AS86_2117 PF01791 DeoC/LacD family aldolase AS86_2118 PF04198 Putative sugar-binding domain AS86_2119 PF00440 Bacterial regulatory proteins, tetR family AS86_212 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS86_2121 PF01906 Putative heavy-metal-binding AS86_2122 PF00583 Acetyltransferase (GNAT) family AS86_2125 PF02073 Thermophilic metalloprotease (M29) AS86_2126 PF05791 Bacillus haemolytic enterotoxin (HBL) AS86_2127 PF05791 Bacillus haemolytic enterotoxin (HBL) AS86_2129 PF13520 Amino acid permease AS86_213 PF00005 ABC transporter AS86_2131 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS86_2131 PF02558 Ketopantoate reductase PanE/ApbA AS86_2135 PF01566 Natural resistance-associated macrophage protein AS86_2137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2137 PF00512 His Kinase A (phospho-acceptor) domain AS86_2138 PF00486 Transcriptional regulatory protein, C terminal AS86_2138 PF00072 Response regulator receiver domain AS86_2139 PF13302 Acetyltransferase (GNAT) domain AS86_214 PF00528 Binding-protein-dependent transport system inner membrane component AS86_2140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_2141 PF01979 Amidohydrolase family AS86_2144 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AS86_2144 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AS86_2145 PF00072 Response regulator receiver domain AS86_2145 PF04397 LytTr DNA-binding domain AS86_2148 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AS86_2149 PF07690 Major Facilitator Superfamily AS86_215 PF00528 Binding-protein-dependent transport system inner membrane component AS86_2152 PF09587 Bacterial capsule synthesis protein PGA_cap AS86_2154 PF00291 Pyridoxal-phosphate dependent enzyme AS86_2154 PF00585 C-terminal regulatory domain of Threonine dehydratase AS86_2155 PF00920 Dehydratase family AS86_2156 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AS86_2156 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AS86_2158 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS86_2158 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS86_2158 PF00205 Thiamine pyrophosphate enzyme, central domain AS86_2159 PF01063 Amino-transferase class IV AS86_216 PF00456 Transketolase, thiamine diphosphate binding domain AS86_216 PF02779 Transketolase, pyrimidine binding domain AS86_216 PF02780 Transketolase, C-terminal domain AS86_2161 PF01625 Peptide methionine sulfoxide reductase AS86_2165 PF04239 Protein of unknown function (DUF421) AS86_2167 PF01522 Polysaccharide deacetylase AS86_2167 PF00457 Glycosyl hydrolases family 11 AS86_2167 PF03422 Carbohydrate binding module (family 6) AS86_2168 PF00209 Sodium:neurotransmitter symporter family AS86_217 PF10747 Sporulation inhibitor of replication protein SirA AS86_2172 PF00291 Pyridoxal-phosphate dependent enzyme AS86_2173 PF07690 Major Facilitator Superfamily AS86_2174 PF16360 GTP-binding GTPase Middle Region AS86_2174 PF01926 50S ribosome-binding GTPase AS86_2174 PF13167 GTP-binding GTPase N-terminal AS86_2175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS86_2175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS86_2176 PF07690 Major Facilitator Superfamily AS86_2177 PF07690 Major Facilitator Superfamily AS86_2178 PF03551 Transcriptional regulator PadR-like family AS86_2178 PF10400 Virulence activator alpha C-term AS86_2179 PF03976 Polyphosphate kinase 2 (PPK2) AS86_218 PF03672 Uncharacterised protein family (UPF0154) AS86_2181 PF07690 Major Facilitator Superfamily AS86_2182 PF09297 NADH pyrophosphatase zinc ribbon domain AS86_2182 PF00293 NUDIX domain AS86_2183 PF14158 YndJ-like protein AS86_2184 PF13761 Domain of unknown function (DUF4166) AS86_2186 PF00696 Amino acid kinase family AS86_2186 PF13840 ACT domain AS86_2188 PF03590 Aspartate-ammonia ligase AS86_219 PF00005 ABC transporter AS86_219 PF00664 ABC transporter transmembrane region AS86_2190 PF04434 SWIM zinc finger AS86_2190 PF00176 SNF2 family N-terminal domain AS86_2190 PF00271 Helicase conserved C-terminal domain AS86_2191 PF00072 Response regulator receiver domain AS86_2191 PF08664 YcbB domain AS86_2192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2193 PF00390 Malic enzyme, N-terminal domain AS86_2193 PF03949 Malic enzyme, NAD binding domain AS86_2194 PF00206 Lyase AS86_2194 PF10415 Fumarase C C-terminus AS86_2195 PF00375 Sodium:dicarboxylate symporter family AS86_2196 PF00696 Amino acid kinase family AS86_2197 PF13091 PLD-like domain AS86_22 PF00318 Ribosomal protein S2 AS86_220 PF00664 ABC transporter transmembrane region AS86_220 PF00005 ABC transporter AS86_2200 PF00005 ABC transporter AS86_2201 PF13492 GAF domain AS86_2201 PF13185 GAF domain AS86_2201 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2201 PF07730 Histidine kinase AS86_2202 PF00196 Bacterial regulatory proteins, luxR family AS86_2202 PF00072 Response regulator receiver domain AS86_2207 PF04286 Protein of unknown function (DUF445) AS86_2208 PF00291 Pyridoxal-phosphate dependent enzyme AS86_221 PF01183 Glycosyl hydrolases family 25 AS86_221 PF08239 Bacterial SH3 domain AS86_2210 PF18801 response regulator aspartate phosphatase H, N terminal AS86_2213 PF00578 AhpC/TSA family AS86_2214 PF02683 Cytochrome C biogenesis protein transmembrane region AS86_2218 PF03575 Peptidase family S51 AS86_2219 PF01554 MatE AS86_2223 PF00206 Lyase AS86_2223 PF10415 Fumarase C C-terminus AS86_2225 PF13411 MerR HTH family regulatory protein AS86_2226 PF03553 Na+/H+ antiporter family AS86_2227 PF00535 Glycosyl transferase family 2 AS86_2229 PF03773 Predicted permease AS86_2230 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS86_2230 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS86_2233 PF01545 Cation efflux family AS86_2233 PF16916 Dimerisation domain of Zinc Transporter AS86_2237 PF13537 Glutamine amidotransferase domain AS86_2237 PF00733 Asparagine synthase AS86_2239 PF01047 MarR family AS86_2241 PF00561 alpha/beta hydrolase fold AS86_2243 PF00300 Histidine phosphatase superfamily (branch 1) AS86_2244 PF13021 Domain of unknown function (DUF3885) AS86_2247 PF10787 Uncharacterised protein from bacillus cereus group AS86_2249 PF12706 Beta-lactamase superfamily domain AS86_2249 PF00753 Metallo-beta-lactamase superfamily AS86_225 PF01925 Sulfite exporter TauE/SafE AS86_2250 PF00528 Binding-protein-dependent transport system inner membrane component AS86_2252 PF08402 TOBE domain AS86_2252 PF00005 ABC transporter AS86_2257 PF08141 Small acid-soluble spore protein H family AS86_2258 PF07238 PilZ domain AS86_2258 PF00535 Glycosyl transferase family 2 AS86_2259 PF03992 Antibiotic biosynthesis monooxygenase AS86_2265 PF02272 DHHA1 domain AS86_2265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS86_2265 PF01411 tRNA synthetases class II (A) AS86_2267 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS86_2267 PF00460 Flagella basal body rod protein AS86_2268 PF00448 SRP54-type protein, GTPase domain AS86_2269 PF00771 FHIPEP family AS86_227 PF00293 NUDIX domain AS86_227 PF13344 Haloacid dehalogenase-like hydrolase AS86_2270 PF01312 FlhB HrpN YscU SpaS Family AS86_2272 PF01313 Bacterial export proteins, family 3 AS86_2273 PF00813 FliP family AS86_2275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AS86_2275 PF04509 CheC-like family AS86_2276 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AS86_2276 PF02154 Flagellar motor switch protein FliM AS86_2278 PF01464 Transglycosylase SLT domain AS86_2279 PF00700 Bacterial flagellin C-terminal helical region AS86_2279 PF00669 Bacterial flagellin N-terminal helical region AS86_228 PF04172 LrgB-like family AS86_2284 PF12181 DNA binding domain of the motility gene repressor (MogR) AS86_2285 PF01584 CheW-like domain AS86_2285 PF00072 Response regulator receiver domain AS86_2288 PF00460 Flagella basal body rod protein AS86_2288 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS86_2288 PF07559 Flagellar basal body protein FlaE AS86_229 PF03788 LrgA family AS86_2292 PF18269 T3SS EscN ATPase C-terminal domain AS86_2292 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS86_2292 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS86_2294 PF01706 FliG C-terminal domain AS86_2294 PF14842 FliG N-terminal domain AS86_2294 PF14841 FliG middle domain AS86_2295 PF01514 Secretory protein of YscJ/FliF family AS86_2295 PF08345 Flagellar M-ring protein C-terminal AS86_2296 PF02049 Flagellar hook-basal body complex protein FliE AS86_2297 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS86_2297 PF00460 Flagella basal body rod protein AS86_2298 PF00460 Flagella basal body rod protein AS86_23 PF00889 Elongation factor TS AS86_230 PF03466 LysR substrate binding domain AS86_230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_2302 PF00669 Bacterial flagellin N-terminal helical region AS86_2302 PF00700 Bacterial flagellin C-terminal helical region AS86_2303 PF00460 Flagella basal body rod protein AS86_2303 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS86_2307 PF03705 CheR methyltransferase, all-alpha domain AS86_2307 PF01739 CheR methyltransferase, SAM binding domain AS86_2310 PF04509 CheC-like family AS86_2310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AS86_2311 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2311 PF07194 P2 response regulator binding domain AS86_2311 PF01584 CheW-like domain AS86_2311 PF01627 Hpt domain AS86_2311 PF02895 Signal transducing histidine kinase, homodimeric domain AS86_2312 PF00072 Response regulator receiver domain AS86_2313 PF00691 OmpA family AS86_2313 PF13677 Membrane MotB of proton-channel complex MotA/MotB AS86_2314 PF01618 MotA/TolQ/ExbB proton channel family AS86_2316 PF17209 Hfq protein AS86_2321 PF00881 Nitroreductase family AS86_2323 PF02698 DUF218 domain AS86_2324 PF04239 Protein of unknown function (DUF421) AS86_2326 PF13411 MerR HTH family regulatory protein AS86_2326 PF06445 GyrI-like small molecule binding domain AS86_2329 PF00999 Sodium/hydrogen exchanger family AS86_2331 PF00202 Aminotransferase class-III AS86_2332 PF00474 Sodium:solute symporter family AS86_2336 PF01810 LysE type translocator AS86_2337 PF08892 YqcI/YcgG family AS86_2338 PF00313 'Cold-shock' DNA-binding domain AS86_234 PF00005 ABC transporter AS86_2343 PF01263 Aldose 1-epimerase AS86_2344 PF13456 Reverse transcriptase-like AS86_2348 PF18014 Acetyltransferase (GNAT) domain AS86_2348 PF13673 Acetyltransferase (GNAT) domain AS86_2351 PF13439 Glycosyltransferase Family 4 AS86_2351 PF00534 Glycosyl transferases group 1 AS86_2352 PF00535 Glycosyl transferase family 2 AS86_2355 PF02397 Bacterial sugar transferase AS86_2357 PF13807 G-rich domain on putative tyrosine kinase AS86_2357 PF02706 Chain length determinant protein AS86_2360 PF01367 5'-3' exonuclease, C-terminal SAM fold AS86_2360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS86_2361 PF00689 Cation transporting ATPase, C-terminus AS86_2361 PF00690 Cation transporter/ATPase, N-terminus AS86_2363 PF03738 Glutathionylspermidine synthase preATP-grasp AS86_2366 PF00581 Rhodanese-like domain AS86_2367 PF10752 Protein of unknown function (DUF2533) AS86_2368 PF00583 Acetyltransferase (GNAT) family AS86_2370 PF00350 Dynamin family AS86_2371 PF04235 Protein of unknown function (DUF418) AS86_2372 PF00860 Permease family AS86_2373 PF00156 Phosphoribosyl transferase domain AS86_2374 PF00557 Metallopeptidase family M24 AS86_2375 PF01636 Phosphotransferase enzyme family AS86_2377 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AS86_2378 PF13307 Helicase C-terminal domain AS86_238 PF02683 Cytochrome C biogenesis protein transmembrane region AS86_2380 PF01170 Putative RNA methylase family UPF0020 AS86_2380 PF02926 THUMP domain AS86_2381 PF05103 DivIVA protein AS86_2382 PF06908 YspA SLOG family AS86_2389 PF10720 Protein of unknown function (DUF2515) AS86_239 PF07301 Protein of unknown function (DUF1453) AS86_2390 PF03838 Recombination protein U AS86_2391 PF00905 Penicillin binding protein transpeptidase domain AS86_2391 PF00912 Transglycosylase AS86_2393 PF00633 Helix-hairpin-helix motif AS86_2393 PF10576 Iron-sulfur binding domain of endonuclease III AS86_2393 PF00730 HhH-GPD superfamily base excision DNA repair protein AS86_2394 PF07261 Replication initiation and membrane attachment AS86_2395 PF00155 Aminotransferase class I and II AS86_2397 PF14084 Protein of unknown function (DUF4264) AS86_2398 PF04851 Type III restriction enzyme, res subunit AS86_2398 PF00929 Exonuclease AS86_2398 PF13307 Helicase C-terminal domain AS86_2399 PF02261 Aspartate decarboxylase AS86_24 PF00696 Amino acid kinase family AS86_240 PF11084 Protein of unknown function (DUF2621) AS86_2400 PF02569 Pantoate-beta-alanine ligase AS86_2401 PF02548 Ketopantoate hydroxymethyltransferase AS86_2403 PF08279 HTH domain AS86_2403 PF02237 Biotin protein ligase C terminal domain AS86_2403 PF03099 Biotin/lipoate A/B protein ligase family AS86_2404 PF01743 Poly A polymerase head domain AS86_2404 PF13735 tRNA nucleotidyltransferase domain 2 putative AS86_2404 PF12627 Probable RNA and SrmB- binding site of polymerase A AS86_2405 PF13439 Glycosyltransferase Family 4 AS86_2405 PF00534 Glycosyl transferases group 1 AS86_2406 PF02585 GlcNAc-PI de-N-acetylase AS86_2407 PF02142 MGS-like domain AS86_2408 PF05173 Dihydrodipicolinate reductase, C-terminus AS86_2408 PF01113 Dihydrodipicolinate reductase, N-terminus AS86_2409 PF03819 MazG nucleotide pyrophosphohydrolase domain AS86_2410 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_2410 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_2412 PF04298 Putative neutral zinc metallopeptidase AS86_2413 PF09577 Sporulation protein YpjB (SpoYpjB) AS86_2415 PF07187 Protein of unknown function (DUF1405) AS86_2416 PF00032 Cytochrome b(C-terminal)/b6/petD AS86_2416 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS86_2417 PF00033 Cytochrome b/b6/petB AS86_2418 PF00355 Rieske [2Fe-2S] domain AS86_2419 PF10673 Protein of unknown function (DUF2487) AS86_2420 PF08858 IDEAL domain AS86_2420 PF08864 UPF0302 domain AS86_2422 PF00155 Aminotransferase class I and II AS86_2423 PF01761 3-dehydroquinate synthase AS86_2424 PF01264 Chorismate synthase AS86_2425 PF00334 Nucleoside diphosphate kinase AS86_2426 PF00348 Polyprenyl synthetase AS86_2427 PF01209 ubiE/COQ5 methyltransferase family AS86_2428 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 AS86_2429 PF01227 GTP cyclohydrolase I AS86_2430 PF00216 Bacterial DNA-binding protein AS86_2431 PF09547 Stage IV sporulation protein A (spore_IV_A) AS86_2433 PF10966 Protein of unknown function (DUF2768) AS86_2435 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AS86_2435 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AS86_2436 PF01926 50S ribosome-binding GTPase AS86_2436 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AS86_2438 PF14045 YIEGIA protein AS86_244 PF13649 Methyltransferase domain AS86_2440 PF14140 YpzI-like protein AS86_2441 PF01070 FMN-dependent dehydrogenase AS86_2442 PF00575 S1 RNA binding domain AS86_2443 PF02224 Cytidylate kinase AS86_2445 PF17763 Glutaminase/Asparaginase C-terminal domain AS86_2445 PF00710 Asparaginase, N-terminal AS86_245 PF09021 HutP AS86_2450 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS86_2450 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS86_2451 PF05389 Negative regulator of genetic competence (MecA) AS86_2452 PF13411 MerR HTH family regulatory protein AS86_2453 PF00149 Calcineurin-like phosphoesterase AS86_2455 PF02517 CPBP intramembrane metalloprotease AS86_2456 PF00270 DEAD/DEAH box helicase AS86_2456 PF00271 Helicase conserved C-terminal domain AS86_2459 PF12822 ECF transporter, substrate-specific component AS86_246 PF00221 Aromatic amino acid lyase AS86_2461 PF01551 Peptidase family M23 AS86_2462 PF01923 Cobalamin adenosyltransferase AS86_2463 PF00989 PAS fold AS86_2463 PF00512 His Kinase A (phospho-acceptor) domain AS86_2463 PF18698 Histidine kinase sensor domain AS86_2463 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2463 PF00672 HAMP domain AS86_2464 PF00072 Response regulator receiver domain AS86_2464 PF00486 Transcriptional regulatory protein, C terminal AS86_2465 PF01578 Cytochrome C assembly protein AS86_2466 PF05140 ResB-like family AS86_2467 PF00578 AhpC/TSA family AS86_2468 PF01479 S4 domain AS86_2468 PF00849 RNA pseudouridylate synthase AS86_2469 PF07670 Nucleoside recognition AS86_247 PF17392 Urocanase C-terminal domain AS86_247 PF01175 Urocanase Rossmann-like domain AS86_247 PF17391 Urocanase N-terminal domain AS86_2470 PF07670 Nucleoside recognition AS86_2471 PF00768 D-alanyl-D-alanine carboxypeptidase AS86_2471 PF07943 Penicillin-binding protein 5, C-terminal domain AS86_2472 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS86_2472 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS86_2475 PF09924 Uncharacterised conserved protein (DUF2156) AS86_2475 PF03706 Lysylphosphatidylglycerol synthase TM region AS86_2477 PF01048 Phosphorylase superfamily AS86_2478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2478 PF00989 PAS fold AS86_2478 PF00512 His Kinase A (phospho-acceptor) domain AS86_2478 PF16736 Single Cache-like AS86_2479 PF00589 Phage integrase family AS86_248 PF01979 Amidohydrolase family AS86_2481 PF01904 Protein of unknown function DUF72 AS86_2482 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2482 PF00512 His Kinase A (phospho-acceptor) domain AS86_2482 PF00989 PAS fold AS86_2485 PF00905 Penicillin binding protein transpeptidase domain AS86_2485 PF00912 Transglycosylase AS86_2486 PF01865 Protein of unknown function DUF47 AS86_2487 PF01384 Phosphate transporter family AS86_2488 PF01925 Sulfite exporter TauE/SafE AS86_249 PF00491 Arginase family AS86_2491 PF00970 Oxidoreductase FAD-binding domain AS86_2491 PF00042 Globin AS86_2491 PF00175 Oxidoreductase NAD-binding domain AS86_2496 PF01209 ubiE/COQ5 methyltransferase family AS86_2498 PF05525 Branched-chain amino acid transport protein AS86_25 PF01765 Ribosome recycling factor AS86_250 PF02559 CarD-like/TRCF domain AS86_2500 PF00072 Response regulator receiver domain AS86_2500 PF00196 Bacterial regulatory proteins, luxR family AS86_2501 PF07730 Histidine kinase AS86_2501 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2501 PF00672 HAMP domain AS86_2502 PF09922 Cell wall-active antibiotics response 4TMS YvqF AS86_2505 PF03553 Na+/H+ antiporter family AS86_2507 PF00375 Sodium:dicarboxylate symporter family AS86_251 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS86_2510 PF00209 Sodium:neurotransmitter symporter family AS86_2512 PF01903 CbiX AS86_2513 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS86_2515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS86_2515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS86_2517 PF14306 PUA-like domain AS86_2517 PF01747 ATP-sulfurylase AS86_2518 PF01507 Phosphoadenosine phosphosulfate reductase family AS86_252 PF01645 Conserved region in glutamate synthase AS86_2520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AS86_2520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AS86_2522 PF00884 Sulfatase AS86_2523 PF01066 CDP-alcohol phosphatidyltransferase AS86_2524 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS86_2524 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS86_2526 PF02811 PHP domain AS86_2527 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AS86_2528 PF01502 Phosphoribosyl-AMP cyclohydrolase AS86_2529 PF00977 Histidine biosynthesis protein AS86_2530 PF00977 Histidine biosynthesis protein AS86_2531 PF00117 Glutamine amidotransferase class-I AS86_2532 PF00475 Imidazoleglycerol-phosphate dehydratase AS86_2533 PF00815 Histidinol dehydrogenase AS86_2534 PF01634 ATP phosphoribosyltransferase AS86_2535 PF13393 Histidyl-tRNA synthetase AS86_2536 PF00694 Aconitase C-terminal domain AS86_2537 PF00330 Aconitase family (aconitate hydratase) AS86_2538 PF00180 Isocitrate/isopropylmalate dehydrogenase AS86_2539 PF00682 HMGL-like AS86_2539 PF08502 LeuA allosteric (dimerisation) domain AS86_254 PF00474 Sodium:solute symporter family AS86_2540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AS86_2540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AS86_2541 PF01842 ACT domain AS86_2541 PF10369 Small subunit of acetolactate synthase AS86_2542 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS86_2542 PF00205 Thiamine pyrophosphate enzyme, central domain AS86_2542 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS86_2543 PF01063 Amino-transferase class IV AS86_2545 PF03698 Uncharacterised protein family (UPF0180) AS86_2547 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AS86_2549 PF02386 Cation transport protein AS86_255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_2550 PF00375 Sodium:dicarboxylate symporter family AS86_2552 PF01047 MarR family AS86_2555 PF02673 Bacitracin resistance protein BacA AS86_2556 PF01554 MatE AS86_256 PF01738 Dienelactone hydrolase family AS86_2560 PF01636 Phosphotransferase enzyme family AS86_2563 PF00258 Flavodoxin AS86_2565 PF07687 Peptidase dimerisation domain AS86_2565 PF01546 Peptidase family M20/M25/M40 AS86_2567 PF00501 AMP-binding enzyme AS86_2567 PF13193 AMP-binding enzyme C-terminal domain AS86_2568 PF03062 MBOAT, membrane-bound O-acyltransferase family AS86_2569 PF00550 Phosphopantetheine attachment site AS86_257 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_257 PF13426 PAS domain AS86_257 PF13188 PAS domain AS86_257 PF00989 PAS fold AS86_257 PF00512 His Kinase A (phospho-acceptor) domain AS86_2570 PF04914 DltD protein AS86_2571 PF03060 Nitronate monooxygenase AS86_2572 PF02016 LD-carboxypeptidase N-terminal domain AS86_2572 PF17676 LD-carboxypeptidase C-terminal domain AS86_2574 PF00857 Isochorismatase family AS86_2576 PF01037 Lrp/AsnC ligand binding domain AS86_2580 PF00005 ABC transporter AS86_2582 PF00005 ABC transporter AS86_2583 PF00392 Bacterial regulatory proteins, gntR family AS86_2584 PF00268 Ribonucleotide reductase, small chain AS86_2585 PF08343 Ribonucleotide reductase N-terminal AS86_2585 PF00317 Ribonucleotide reductase, all-alpha domain AS86_2585 PF02867 Ribonucleotide reductase, barrel domain AS86_2586 PF07972 NrdI Flavodoxin like AS86_259 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_259 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_2592 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) AS86_2593 PF14489 QueF-like protein AS86_2594 PF04055 Radical SAM superfamily AS86_2595 PF01242 6-pyruvoyl tetrahydropterin synthase AS86_2596 PF06508 Queuosine biosynthesis protein QueC AS86_2597 PF13188 PAS domain AS86_2597 PF13426 PAS domain AS86_2597 PF00989 PAS fold AS86_2597 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2597 PF00512 His Kinase A (phospho-acceptor) domain AS86_2599 PF12867 DinB superfamily AS86_26 PF01255 Putative undecaprenyl diphosphate synthase AS86_2601 PF01047 MarR family AS86_2602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2602 PF02743 Cache domain AS86_2602 PF00512 His Kinase A (phospho-acceptor) domain AS86_2603 PF09388 Spo0E like sporulation regulatory protein AS86_2604 PF04748 Divergent polysaccharide deacetylase AS86_2606 PF00596 Class II Aldolase and Adducin N-terminal domain AS86_2609 PF00455 DeoR C terminal sensor domain AS86_2609 PF08220 DeoR-like helix-turn-helix domain AS86_2611 PF00266 Aminotransferase class-V AS86_2612 PF13419 Haloacid dehalogenase-like hydrolase AS86_2613 PF00528 Binding-protein-dependent transport system inner membrane component AS86_2614 PF08402 TOBE domain AS86_2614 PF00005 ABC transporter AS86_2618 PF02386 Cation transport protein AS86_2620 PF00561 alpha/beta hydrolase fold AS86_2625 PF01575 MaoC like domain AS86_2626 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS86_2627 PF02386 Cation transport protein AS86_2628 PF03741 Integral membrane protein TerC family AS86_2629 PF01226 Formate/nitrite transporter AS86_263 PF05532 CsbD-like AS86_2631 PF01478 Type IV leader peptidase family AS86_2631 PF06750 Bacterial Peptidase A24 N-terminal domain AS86_2632 PF02589 LUD domain AS86_2633 PF13183 4Fe-4S dicluster domain AS86_2633 PF11870 Domain of unknown function (DUF3390) AS86_2633 PF02589 LUD domain AS86_2634 PF02754 Cysteine-rich domain AS86_2635 PF00392 Bacterial regulatory proteins, gntR family AS86_2635 PF07729 FCD domain AS86_2636 PF00989 PAS fold AS86_2636 PF18698 Histidine kinase sensor domain AS86_2636 PF00512 His Kinase A (phospho-acceptor) domain AS86_2636 PF00672 HAMP domain AS86_2636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2637 PF00072 Response regulator receiver domain AS86_2637 PF00486 Transcriptional regulatory protein, C terminal AS86_2639 PF17853 GGDEF-like domain AS86_2639 PF13556 PucR C-terminal helix-turn-helix domain AS86_2639 PF05651 Putative sugar diacid recognition AS86_2640 PF01565 FAD binding domain AS86_2640 PF02913 FAD linked oxidases, C-terminal domain AS86_2641 PF13183 4Fe-4S dicluster domain AS86_2641 PF02754 Cysteine-rich domain AS86_2642 PF00188 Cysteine-rich secretory protein family AS86_2644 PF00849 RNA pseudouridylate synthase AS86_2644 PF01479 S4 domain AS86_2646 PF03176 MMPL family AS86_2647 PF01569 PAP2 superfamily AS86_2648 PF13416 Bacterial extracellular solute-binding protein AS86_2649 PF00528 Binding-protein-dependent transport system inner membrane component AS86_2650 PF00528 Binding-protein-dependent transport system inner membrane component AS86_2651 PF08402 TOBE domain AS86_2651 PF00005 ABC transporter AS86_2652 PF00171 Aldehyde dehydrogenase family AS86_2653 PF05547 Immune inhibitor A peptidase M6 AS86_2655 PF08671 Anti-repressor SinI AS86_2655 PF01381 Helix-turn-helix AS86_2656 PF12389 Camelysin metallo-endopeptidase AS86_2658 PF12389 Camelysin metallo-endopeptidase AS86_266 PF01381 Helix-turn-helix AS86_2660 PF07943 Penicillin-binding protein 5, C-terminal domain AS86_2660 PF00768 D-alanyl-D-alanine carboxypeptidase AS86_2662 PF13649 Methyltransferase domain AS86_2666 PF13333 Integrase core domain AS86_2666 PF00665 Integrase core domain AS86_2666 PF13276 HTH-like domain AS86_2669 PF00005 ABC transporter AS86_2669 PF13732 Domain of unknown function (DUF4162) AS86_267 PF13193 AMP-binding enzyme C-terminal domain AS86_267 PF00501 AMP-binding enzyme AS86_2674 PF01381 Helix-turn-helix AS86_2675 PF00676 Dehydrogenase E1 component AS86_2675 PF16870 2-oxoglutarate dehydrogenase C-terminal AS86_2675 PF02779 Transketolase, pyrimidine binding domain AS86_2676 PF00364 Biotin-requiring enzyme AS86_2676 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS86_2676 PF02817 e3 binding domain AS86_2679 PF00881 Nitroreductase family AS86_268 PF02632 BioY family AS86_2682 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS86_2682 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_2687 PF10042 Uncharacterized conserved protein (DUF2278) AS86_2688 PF02652 L-lactate permease AS86_269 PF00501 AMP-binding enzyme AS86_269 PF13193 AMP-binding enzyme C-terminal domain AS86_2690 PF00290 Tryptophan synthase alpha chain AS86_2691 PF00291 Pyridoxal-phosphate dependent enzyme AS86_2692 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AS86_2693 PF00218 Indole-3-glycerol phosphate synthase AS86_2694 PF00591 Glycosyl transferase family, a/b domain AS86_2694 PF02885 Glycosyl transferase family, helical bundle domain AS86_2695 PF00117 Glutamine amidotransferase class-I AS86_2695 PF00591 Glycosyl transferase family, a/b domain AS86_2695 PF02885 Glycosyl transferase family, helical bundle domain AS86_2697 PF00474 Sodium:solute symporter family AS86_2698 PF02368 Bacterial Ig-like domain (group 2) AS86_270 PF00108 Thiolase, N-terminal domain AS86_270 PF02803 Thiolase, C-terminal domain AS86_2701 PF00756 Putative esterase AS86_2703 PF13673 Acetyltransferase (GNAT) domain AS86_2704 PF00580 UvrD/REP helicase N-terminal domain AS86_2704 PF13361 UvrD-like helicase C-terminal domain AS86_2707 PF07098 Protein of unknown function (DUF1360) AS86_2711 PF04321 RmlD substrate binding domain AS86_2712 PF16363 GDP-mannose 4,6 dehydratase AS86_2713 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AS86_2714 PF00483 Nucleotidyl transferase AS86_272 PF00293 NUDIX domain AS86_272 PF13344 Haloacid dehalogenase-like hydrolase AS86_2721 PF05711 Macrocin-O-methyltransferase (TylF) AS86_2722 PF08241 Methyltransferase domain AS86_2723 PF00535 Glycosyl transferase family 2 AS86_2724 PF01098 Cell cycle protein AS86_2725 PF00149 Calcineurin-like phosphoesterase AS86_2727 PF00849 RNA pseudouridylate synthase AS86_2728 PF01513 ATP-NAD kinase AS86_2729 PF04607 Region found in RelA / SpoT proteins AS86_273 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS86_273 PF01411 tRNA synthetases class II (A) AS86_273 PF02272 DHHA1 domain AS86_2731 PF01928 CYTH domain AS86_2732 PF01152 Bacterial-like globin AS86_2734 PF08439 Oligopeptidase F AS86_2734 PF01432 Peptidase family M3 AS86_2736 PF13396 Phospholipase_D-nuclease N-terminal AS86_2736 PF13091 PLD-like domain AS86_2737 PF05389 Negative regulator of genetic competence (MecA) AS86_2738 PF03741 Integral membrane protein TerC family AS86_2739 PF03960 ArsC family AS86_2741 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_2742 PF01554 MatE AS86_2743 PF00005 ABC transporter AS86_2743 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS86_2744 PF00005 ABC transporter AS86_2744 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS86_2745 PF12911 N-terminal TM domain of oligopeptide transport permease C AS86_2745 PF00528 Binding-protein-dependent transport system inner membrane component AS86_2746 PF00528 Binding-protein-dependent transport system inner membrane component AS86_2747 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_2749 PF00579 tRNA synthetases class I (W and Y) AS86_275 PF07690 Major Facilitator Superfamily AS86_2750 PF12227 Protein of unknown function (DUF3603) AS86_2751 PF10026 Predicted Zn-dependent protease (DUF2268) AS86_2752 PF02801 Beta-ketoacyl synthase, C-terminal domain AS86_2752 PF00109 Beta-ketoacyl synthase, N-terminal domain AS86_2753 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS86_2753 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS86_2754 PF10815 ComZ AS86_2758 PF10431 C-terminal, D2-small domain, of ClpB protein AS86_2758 PF02861 Clp amino terminal domain, pathogenicity island component AS86_2758 PF07724 AAA domain (Cdc48 subfamily) AS86_2758 PF17871 AAA lid domain AS86_2758 PF00004 ATPase family associated with various cellular activities (AAA) AS86_2759 PF14168 YjzC-like protein AS86_2762 PF12758 Protein of unknown function (DUF3813) AS86_2763 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_2763 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_277 PF08179 Small acid-soluble spore protein P family AS86_2771 PF05593 RHS Repeat AS86_2775 PF05593 RHS Repeat AS86_2776 PF17783 CvfB-like winged helix domain AS86_2776 PF13509 S1 domain AS86_2777 PF04461 Protein of unknown function (DUF520) AS86_2779 PF00128 Alpha amylase, catalytic domain AS86_2780 PF00909 Ammonium Transporter Family AS86_2781 PF00199 Catalase AS86_2781 PF06628 Catalase-related immune-responsive AS86_2783 PF00733 Asparagine synthase AS86_2783 PF13537 Glutamine amidotransferase domain AS86_2785 PF07457 Protein of unknown function (DUF1516) AS86_2786 PF00202 Aminotransferase class-III AS86_2788 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS86_2789 PF09388 Spo0E like sporulation regulatory protein AS86_279 PF01522 Polysaccharide deacetylase AS86_2790 PF10676 Spore germination protein gerPA/gerPF AS86_2791 PF10803 Spore germination GerPB AS86_2792 PF10737 Spore germination protein GerPC AS86_2794 PF10970 Spore germination protein GerPE AS86_2795 PF10676 Spore germination protein gerPA/gerPF AS86_2797 PF12705 PD-(D/E)XK nuclease superfamily AS86_2797 PF13361 UvrD-like helicase C-terminal domain AS86_2797 PF00580 UvrD/REP helicase N-terminal domain AS86_2798 PF13361 UvrD-like helicase C-terminal domain AS86_2798 PF12705 PD-(D/E)XK nuclease superfamily AS86_2799 PF10502 Signal peptidase, peptidase S26 AS86_28 PF13288 DXP reductoisomerase C-terminal domain AS86_28 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AS86_28 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AS86_2800 PF09335 SNARE associated Golgi protein AS86_2801 PF06338 ComK protein AS86_2804 PF00313 'Cold-shock' DNA-binding domain AS86_2807 PF00463 Isocitrate lyase family AS86_2808 PF01274 Malate synthase AS86_281 PF00330 Aconitase family (aconitate hydratase) AS86_281 PF00694 Aconitase C-terminal domain AS86_2810 PF00395 S-layer homology domain AS86_2810 PF00331 Glycosyl hydrolase family 10 AS86_2810 PF02018 Carbohydrate binding domain AS86_2810 PF06452 Carbohydrate family 9 binding domain-like AS86_2812 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_2812 PF02743 Cache domain AS86_2812 PF00672 HAMP domain AS86_2813 PF01435 Peptidase family M48 AS86_2813 PF16491 CAAX prenyl protease N-terminal, five membrane helices AS86_2817 PF00072 Response regulator receiver domain AS86_2817 PF00486 Transcriptional regulatory protein, C terminal AS86_2818 PF00512 His Kinase A (phospho-acceptor) domain AS86_2818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_282 PF00005 ABC transporter AS86_2820 PF12833 Helix-turn-helix domain AS86_2820 PF06445 GyrI-like small molecule binding domain AS86_2821 PF04542 Sigma-70 region 2 AS86_2821 PF08281 Sigma-70, region 4 AS86_2823 PF01966 HD domain AS86_2824 PF00149 Calcineurin-like phosphoesterase AS86_2825 PF12146 Serine aminopeptidase, S33 AS86_2827 PF07968 Leukocidin/Hemolysin toxin family AS86_2836 PF05593 RHS Repeat AS86_2838 PF00501 AMP-binding enzyme AS86_2838 PF13193 AMP-binding enzyme C-terminal domain AS86_284 PF00578 AhpC/TSA family AS86_2840 PF10437 Bacterial lipoate protein ligase C-terminus AS86_2840 PF03099 Biotin/lipoate A/B protein ligase family AS86_2841 PF12706 Beta-lactamase superfamily domain AS86_2842 PF14149 YhfH-like protein AS86_2843 PF00356 Bacterial regulatory proteins, lacI family AS86_2849 PF17932 Tetracyclin repressor-like, C-terminal domain AS86_2849 PF00440 Bacterial regulatory proteins, tetR family AS86_285 PF01336 OB-fold nucleic acid binding domain AS86_285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS86_285 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS86_285 PF02811 PHP domain AS86_285 PF14579 Helix-hairpin-helix motif AS86_285 PF00929 Exonuclease AS86_285 PF11490 DNA polymerase III polC-type N-terminus II AS86_2856 PF01208 Uroporphyrinogen decarboxylase (URO-D) AS86_2857 PF00912 Transglycosylase AS86_2857 PF00905 Penicillin binding protein transpeptidase domain AS86_2858 PF03992 Antibiotic biosynthesis monooxygenase AS86_2859 PF03703 Bacterial PH domain AS86_286 PF13040 Fur-regulated basic protein B AS86_2860 PF03703 Bacterial PH domain AS86_2861 PF00892 EamA-like transporter family AS86_2863 PF10014 2OG-Fe dioxygenase AS86_2868 PF03703 Bacterial PH domain AS86_2869 PF03703 Bacterial PH domain AS86_287 PF08177 Small acid-soluble spore protein N family AS86_2871 PF00440 Bacterial regulatory proteins, tetR family AS86_2871 PF17934 Tetracyclin repressor-like, C-terminal domain AS86_2872 PF12787 EcsC protein family AS86_2873 PF05975 Bacterial ABC transporter protein EcsB AS86_2874 PF00005 ABC transporter AS86_2875 PF01230 HIT domain AS86_2876 PF12732 YtxH-like protein AS86_2877 PF01047 MarR family AS86_288 PF01476 LysM domain AS86_288 PF00704 Glycosyl hydrolases family 18 AS86_2881 PF13538 UvrD-like helicase C-terminal domain AS86_2885 PF04542 Sigma-70 region 2 AS86_2885 PF08281 Sigma-70, region 4 AS86_2888 PF03551 Transcriptional regulator PadR-like family AS86_2889 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AS86_2889 PF01266 FAD dependent oxidoreductase AS86_289 PF03061 Thioesterase superfamily AS86_2890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS86_2890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS86_2891 PF00230 Major intrinsic protein AS86_2892 PF04309 Glycerol-3-phosphate responsive antiterminator AS86_2893 PF07282 Putative transposase DNA-binding domain AS86_2893 PF12323 Helix-turn-helix domain AS86_2893 PF01385 Probable transposase AS86_2894 PF01381 Helix-turn-helix AS86_2895 PF00190 Cupin AS86_2899 PF14147 Sporulation protein YhaL AS86_29 PF02163 Peptidase family M50 AS86_29 PF17820 PDZ domain AS86_290 PF01521 Iron-sulphur cluster biosynthesis AS86_2900 PF08386 TAP-like protein AS86_2900 PF00561 alpha/beta hydrolase fold AS86_2903 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_2904 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_2905 PF01810 LysE type translocator AS86_2907 PF01966 HD domain AS86_2907 PF01336 OB-fold nucleic acid binding domain AS86_2908 PF13514 AAA domain AS86_2909 PF00149 Calcineurin-like phosphoesterase AS86_291 PF02660 Glycerol-3-phosphate acyltransferase AS86_2912 PF11121 Protein of unknown function (DUF2639) AS86_2913 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AS86_2914 PF08240 Alcohol dehydrogenase GroES-like domain AS86_2914 PF00107 Zinc-binding dehydrogenase AS86_2915 PF07282 Putative transposase DNA-binding domain AS86_2915 PF01385 Probable transposase AS86_2915 PF12323 Helix-turn-helix domain AS86_2917 PF01906 Putative heavy-metal-binding AS86_292 PF03477 ATP cone domain AS86_292 PF13597 Anaerobic ribonucleoside-triphosphate reductase AS86_2922 PF01627 Hpt domain AS86_2922 PF00072 Response regulator receiver domain AS86_2922 PF00512 His Kinase A (phospho-acceptor) domain AS86_2922 PF00672 HAMP domain AS86_2922 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_2922 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS86_2923 PF03705 CheR methyltransferase, all-alpha domain AS86_2923 PF01739 CheR methyltransferase, SAM binding domain AS86_2924 PF13426 PAS domain AS86_2924 PF07228 Stage II sporulation protein E (SpoIIE) AS86_2926 PF04542 Sigma-70 region 2 AS86_2926 PF04539 Sigma-70 region 3 AS86_2926 PF04545 Sigma-70, region 4 AS86_2927 PF13581 Histidine kinase-like ATPase domain AS86_2928 PF01740 STAS domain AS86_293 PF04055 Radical SAM superfamily AS86_2932 PF11181 Heat induced stress protein YflT AS86_2939 PF00395 S-layer homology domain AS86_294 PF00072 Response regulator receiver domain AS86_294 PF00486 Transcriptional regulatory protein, C terminal AS86_2948 PF00005 ABC transporter AS86_295 PF13180 PDZ domain AS86_2952 PF02733 Dak1 domain AS86_2954 PF02733 Dak1 domain AS86_2957 PF07690 Major Facilitator Superfamily AS86_2959 PF01066 CDP-alcohol phosphatidyltransferase AS86_296 PF13380 CoA binding domain AS86_297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_297 PF00986 DNA gyrase B subunit, carboxyl terminus AS86_297 PF00204 DNA gyrase B AS86_297 PF01751 Toprim domain AS86_2970 PF13026 Protein of unknown function (DUF3887) AS86_2970 PF12146 Serine aminopeptidase, S33 AS86_298 PF00521 DNA gyrase/topoisomerase IV, subunit A AS86_298 PF03989 DNA gyrase C-terminal domain, beta-propeller AS86_2985 PF07690 Major Facilitator Superfamily AS86_2987 PF01925 Sulfite exporter TauE/SafE AS86_299 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS86_299 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS86_2990 PF00772 DnaB-like helicase N terminal domain AS86_2990 PF03796 DnaB-like helicase C terminal domain AS86_2994 PF13361 UvrD-like helicase C-terminal domain AS86_2994 PF00580 UvrD/REP helicase N-terminal domain AS86_2998 PF00145 C-5 cytosine-specific DNA methylase AS86_2998 PF12728 Helix-turn-helix domain AS86_3 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AS86_30 PF03129 Anticodon binding domain AS86_30 PF04073 Aminoacyl-tRNA editing domain AS86_30 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS86_3002 PF03401 Tripartite tricarboxylate transporter family receptor AS86_3003 PF12431 Transcriptional regulator AS86_3003 PF08279 HTH domain AS86_3003 PF00072 Response regulator receiver domain AS86_3004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3004 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS86_3005 PF00083 Sugar (and other) transporter AS86_3013 PF05638 Type VI secretion system effector, Hcp AS86_3015 PF04740 LXG domain of WXG superfamily AS86_3015 PF14436 Bacterial EndoU nuclease AS86_3016 PF14436 Bacterial EndoU nuclease AS86_3016 PF04740 LXG domain of WXG superfamily AS86_3019 PF06013 Proteins of 100 residues with WXG AS86_3020 PF13276 HTH-like domain AS86_3020 PF00665 Integrase core domain AS86_3020 PF13333 Integrase core domain AS86_3021 PF01527 Transposase AS86_3027 PF05977 Transmembrane secretion effector AS86_3028 PF00899 ThiF family AS86_303 PF13732 Domain of unknown function (DUF4162) AS86_303 PF00005 ABC transporter AS86_3031 PF00206 Lyase AS86_3031 PF10397 Adenylosuccinate lyase C-terminus AS86_3032 PF00550 Phosphopantetheine attachment site AS86_3032 PF07993 Male sterility protein AS86_3032 PF00668 Condensation domain AS86_3032 PF13193 AMP-binding enzyme C-terminal domain AS86_3032 PF00501 AMP-binding enzyme AS86_3036 PF00753 Metallo-beta-lactamase superfamily AS86_3036 PF16123 Hydroxyacylglutathione hydrolase C-terminus AS86_3038 PF00005 ABC transporter AS86_3038 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS86_3039 PF00005 ABC transporter AS86_3039 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS86_3040 PF12911 N-terminal TM domain of oligopeptide transport permease C AS86_3040 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3041 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3042 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_3043 PF02423 Ornithine cyclodeaminase/mu-crystallin family AS86_3044 PF05544 Proline racemase AS86_3045 PF11121 Protein of unknown function (DUF2639) AS86_3047 PF01520 N-acetylmuramoyl-L-alanine amidase AS86_3047 PF00395 S-layer homology domain AS86_3048 PF05343 M42 glutamyl aminopeptidase AS86_305 PF08281 Sigma-70, region 4 AS86_305 PF04542 Sigma-70 region 2 AS86_3052 PF00378 Enoyl-CoA hydratase/isomerase AS86_3056 PF01943 Polysaccharide biosynthesis protein AS86_3056 PF14667 Polysaccharide biosynthesis C-terminal domain AS86_3057 PF01740 STAS domain AS86_3057 PF00916 Sulfate permease family AS86_3059 PF13193 AMP-binding enzyme C-terminal domain AS86_3059 PF00501 AMP-binding enzyme AS86_3060 PF04055 Radical SAM superfamily AS86_3061 PF01471 Putative peptidoglycan binding domain AS86_3061 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_3062 PF17210 SdrD B-like domain AS86_3062 PF04650 YSIRK type signal peptide AS86_3062 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AS86_3062 PF17961 Bacterial Ig domain AS86_3062 PF00746 LPXTG cell wall anchor motif AS86_3064 PF02245 Methylpurine-DNA glycosylase (MPG) AS86_3066 PF03306 Alpha-acetolactate decarboxylase AS86_3067 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS86_3067 PF00205 Thiamine pyrophosphate enzyme, central domain AS86_3067 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS86_307 PF03816 Cell envelope-related transcriptional attenuator domain AS86_3070 PF06133 Control of competence regulator ComK, YlbF/YmcA AS86_3071 PF04286 Protein of unknown function (DUF445) AS86_3073 PF14398 YheC/D like ATP-grasp AS86_3075 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS86_3076 PF00005 ABC transporter AS86_3077 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3078 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS86_3079 PF00005 ABC transporter AS86_3079 PF00664 ABC transporter transmembrane region AS86_308 PF00375 Sodium:dicarboxylate symporter family AS86_3080 PF00664 ABC transporter transmembrane region AS86_3080 PF00005 ABC transporter AS86_3081 PF00171 Aldehyde dehydrogenase family AS86_3082 PF13520 Amino acid permease AS86_3084 PF06628 Catalase-related immune-responsive AS86_3084 PF18011 C-terminal domain found in long catalases AS86_3084 PF00199 Catalase AS86_3085 PF01965 DJ-1/PfpI family AS86_3087 PF02525 Flavodoxin-like fold AS86_3089 PF01638 HxlR-like helix-turn-helix AS86_309 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_3090 PF07690 Major Facilitator Superfamily AS86_3091 PF17934 Tetracyclin repressor-like, C-terminal domain AS86_3091 PF00440 Bacterial regulatory proteins, tetR family AS86_3093 PF00893 Small Multidrug Resistance protein AS86_3094 PF13411 MerR HTH family regulatory protein AS86_3095 PF00106 short chain dehydrogenase AS86_3097 PF01037 Lrp/AsnC ligand binding domain AS86_3098 PF00892 EamA-like transporter family AS86_31 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS86_31 PF14480 DNA polymerase III polC-type N-terminus I AS86_31 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS86_31 PF14579 Helix-hairpin-helix motif AS86_31 PF11490 DNA polymerase III polC-type N-terminus II AS86_31 PF00929 Exonuclease AS86_31 PF02811 PHP domain AS86_3101 PF07681 DoxX AS86_3103 PF02378 Phosphotransferase system, EIIC AS86_3103 PF00367 phosphotransferase system, EIIB AS86_3104 PF13580 SIS domain AS86_3105 PF01418 Helix-turn-helix domain, rpiR family AS86_3105 PF01380 SIS domain AS86_3107 PF00999 Sodium/hydrogen exchanger family AS86_3108 PF13520 Amino acid permease AS86_311 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_3115 PF09335 SNARE associated Golgi protein AS86_3117 PF02735 Ku70/Ku80 beta-barrel domain AS86_312 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_3120 PF11007 Spore coat associated protein JA (CotJA) AS86_3121 PF12652 CotJB protein AS86_3122 PF05067 Manganese containing catalase AS86_3123 PF05525 Branched-chain amino acid transport protein AS86_3126 PF09529 Integral membrane protein (intg_mem_TP0381) AS86_3128 PF00005 ABC transporter AS86_3129 PF02687 FtsX-like permease family AS86_3129 PF12704 MacB-like periplasmic core domain AS86_313 PF08241 Methyltransferase domain AS86_3130 PF06725 3D domain AS86_3130 PF01476 LysM domain AS86_3134 PF02378 Phosphotransferase system, EIIC AS86_3135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS86_3136 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AS86_3137 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS86_3137 PF08279 HTH domain AS86_3137 PF05043 Mga helix-turn-helix domain AS86_3137 PF00874 PRD domain AS86_3139 PF07690 Major Facilitator Superfamily AS86_3140 PF02690 Na+/Pi-cotransporter AS86_3141 PF00107 Zinc-binding dehydrogenase AS86_3141 PF08240 Alcohol dehydrogenase GroES-like domain AS86_3142 PF03816 Cell envelope-related transcriptional attenuator domain AS86_3144 PF01925 Sulfite exporter TauE/SafE AS86_3145 PF13686 DsrE/DsrF/DrsH-like family AS86_3147 PF01206 Sulfurtransferase TusA AS86_3147 PF00581 Rhodanese-like domain AS86_3148 PF01206 Sulfurtransferase TusA AS86_3149 PF00753 Metallo-beta-lactamase superfamily AS86_3149 PF00581 Rhodanese-like domain AS86_3150 PF01206 Sulfurtransferase TusA AS86_3150 PF00581 Rhodanese-like domain AS86_3151 PF02583 Metal-sensitive transcriptional repressor AS86_3153 PF00089 Trypsin AS86_3156 PF04293 SpoVR like protein AS86_3157 PF00881 Nitroreductase family AS86_3159 PF03323 Bacillus/Clostridium GerA spore germination protein AS86_3161 PF03845 Spore germination protein AS86_3163 PF14148 YhdB-like protein AS86_3164 PF02600 Disulfide bond formation protein DsbB AS86_3165 PF00085 Thioredoxin AS86_3168 PF17969 L,D-transpeptidase C-terminal domain AS86_3168 PF03734 L,D-transpeptidase catalytic domain AS86_3170 PF00860 Permease family AS86_3173 PF01047 MarR family AS86_3174 PF07690 Major Facilitator Superfamily AS86_3175 PF02702 Osmosensitive K+ channel His kinase sensor domain AS86_3176 PF02669 K+-transporting ATPase, c chain AS86_3178 PF03814 Potassium-transporting ATPase A subunit AS86_3182 PF08543 Phosphomethylpyrimidine kinase AS86_3183 PF00899 ThiF family AS86_3184 PF05690 Thiazole biosynthesis protein ThiG AS86_3185 PF02597 ThiS family AS86_3186 PF01266 FAD dependent oxidoreductase AS86_3187 PF02581 Thiamine monophosphate synthase AS86_3188 PF09084 NMT1/THI5 like AS86_3189 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3190 PF00005 ABC transporter AS86_3191 PF03070 TENA/THI-4/PQQC family AS86_3192 PF00246 Zinc carboxypeptidase AS86_3192 PF08239 Bacterial SH3 domain AS86_3195 PF00571 CBS domain AS86_32 PF17384 RimP C-terminal SH3 domain AS86_32 PF02576 RimP N-terminal domain AS86_322 PF03323 Bacillus/Clostridium GerA spore germination protein AS86_3222 PF00873 AcrB/AcrD/AcrF family AS86_3224 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3225 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3226 PF12849 PBP superfamily domain AS86_3227 PF17910 FeoB cytosolic helical domain AS86_3227 PF02421 Ferrous iron transport protein B AS86_3227 PF07664 Ferrous iron transport protein B C terminus AS86_3227 PF07670 Nucleoside recognition AS86_3227 PF04023 FeoA domain AS86_3228 PF07670 Nucleoside recognition AS86_3228 PF02421 Ferrous iron transport protein B AS86_3228 PF07664 Ferrous iron transport protein B C terminus AS86_3228 PF17910 FeoB cytosolic helical domain AS86_3229 PF17910 FeoB cytosolic helical domain AS86_3229 PF02421 Ferrous iron transport protein B AS86_3229 PF07664 Ferrous iron transport protein B C terminus AS86_3229 PF07670 Nucleoside recognition AS86_3230 PF05504 Spore germination B3/ GerAC like, C-terminal AS86_3231 PF03845 Spore germination protein AS86_3232 PF03323 Bacillus/Clostridium GerA spore germination protein AS86_3233 PF00474 Sodium:solute symporter family AS86_3234 PF11755 Protein of unknown function (DUF3311) AS86_3235 PF01546 Peptidase family M20/M25/M40 AS86_3235 PF07687 Peptidase dimerisation domain AS86_3236 PF13529 Peptidase_C39 like family AS86_3237 PF00324 Amino acid permease AS86_3238 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AS86_3239 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS86_3240 PF00510 Cytochrome c oxidase subunit III AS86_3242 PF02254 TrkA-N domain AS86_3242 PF00999 Sodium/hydrogen exchanger family AS86_3242 PF02080 TrkA-C domain AS86_3244 PF13673 Acetyltransferase (GNAT) domain AS86_3247 PF00860 Permease family AS86_3248 PF00324 Amino acid permease AS86_325 PF00037 4Fe-4S binding domain AS86_325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS86_325 PF00384 Molybdopterin oxidoreductase AS86_325 PF01568 Molydopterin dinucleotide binding domain AS86_325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS86_3251 PF05525 Branched-chain amino acid transport protein AS86_3253 PF00854 POT family AS86_3255 PF04203 Sortase domain AS86_3257 PF01381 Helix-turn-helix AS86_3258 PF06725 3D domain AS86_3258 PF07501 G5 domain AS86_3258 PF03990 G5-linked-Ubiquitin-like domain AS86_3259 PF02743 Cache domain AS86_3259 PF00672 HAMP domain AS86_3259 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_3260 PF02673 Bacitracin resistance protein BacA AS86_3263 PF01565 FAD binding domain AS86_3263 PF04030 D-arabinono-1,4-lactone oxidase AS86_3265 PF03372 Endonuclease/Exonuclease/phosphatase family AS86_3266 PF00882 Zinc dependent phospholipase C AS86_3268 PF00107 Zinc-binding dehydrogenase AS86_3268 PF08240 Alcohol dehydrogenase GroES-like domain AS86_3272 PF05547 Immune inhibitor A peptidase M6 AS86_3273 PF00923 Transaldolase/Fructose-6-phosphate aldolase AS86_3274 PF13407 Periplasmic binding protein domain AS86_3275 PF02653 Branched-chain amino acid transport system / permease component AS86_3276 PF00005 ABC transporter AS86_3277 PF05025 RbsD / FucU transport protein family AS86_3278 PF00294 pfkB family carbohydrate kinase AS86_3279 PF00356 Bacterial regulatory proteins, lacI family AS86_3280 PF07690 Major Facilitator Superfamily AS86_3281 PF01047 MarR family AS86_3282 PF07690 Major Facilitator Superfamily AS86_3284 PF00582 Universal stress protein family AS86_3285 PF01740 STAS domain AS86_3285 PF00916 Sulfate permease family AS86_3289 PF00072 Response regulator receiver domain AS86_3289 PF00486 Transcriptional regulatory protein, C terminal AS86_3290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3290 PF18698 Histidine kinase sensor domain AS86_3290 PF00989 PAS fold AS86_3290 PF00512 His Kinase A (phospho-acceptor) domain AS86_3290 PF00672 HAMP domain AS86_3291 PF01872 RibD C-terminal domain AS86_3292 PF08279 HTH domain AS86_3292 PF13280 WYL domain AS86_3294 PF04542 Sigma-70 region 2 AS86_3294 PF08281 Sigma-70, region 4 AS86_3297 PF00324 Amino acid permease AS86_3298 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3299 PF00528 Binding-protein-dependent transport system inner membrane component AS86_33 PF08529 NusA N-terminal domain AS86_33 PF13184 NusA-like KH domain AS86_33 PF00575 S1 RNA binding domain AS86_3300 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS86_3301 PF00005 ABC transporter AS86_3302 PF01235 Sodium:alanine symporter family AS86_3303 PF01636 Phosphotransferase enzyme family AS86_3304 PF03323 Bacillus/Clostridium GerA spore germination protein AS86_3308 PF16657 Maltogenic Amylase, C-terminal domain AS86_3308 PF00128 Alpha amylase, catalytic domain AS86_3309 PF02378 Phosphotransferase system, EIIC AS86_3309 PF00367 phosphotransferase system, EIIB AS86_3310 PF07702 UTRA domain AS86_3310 PF00392 Bacterial regulatory proteins, gntR family AS86_3311 PF13520 Amino acid permease AS86_3312 PF00563 EAL domain AS86_3312 PF00990 Diguanylate cyclase, GGDEF domain AS86_3312 PF03707 Bacterial signalling protein N terminal repeat AS86_3314 PF13396 Phospholipase_D-nuclease N-terminal AS86_3314 PF13091 PLD-like domain AS86_3315 PF07728 AAA domain (dynein-related subfamily) AS86_3316 PF00092 von Willebrand factor type A domain AS86_3317 PF13344 Haloacid dehalogenase-like hydrolase AS86_3317 PF00293 NUDIX domain AS86_3318 PF01370 NAD dependent epimerase/dehydratase family AS86_3319 PF00155 Aminotransferase class I and II AS86_3321 PF00005 ABC transporter AS86_3322 PF01032 FecCD transport family AS86_3323 PF01032 FecCD transport family AS86_3324 PF01497 Periplasmic binding protein AS86_3325 PF00854 POT family AS86_3326 PF08141 Small acid-soluble spore protein H family AS86_3327 PF01022 Bacterial regulatory protein, arsR family AS86_3328 PF02652 L-lactate permease AS86_3329 PF00206 Lyase AS86_3329 PF10415 Fumarase C C-terminus AS86_3330 PF03471 Transporter associated domain AS86_3330 PF01595 Cyclin M transmembrane N-terminal domain AS86_3330 PF00571 CBS domain AS86_3331 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_3332 PF01773 Na+ dependent nucleoside transporter N-terminus AS86_3332 PF07662 Na+ dependent nucleoside transporter C-terminus AS86_3333 PF03816 Cell envelope-related transcriptional attenuator domain AS86_3334 PF04294 VanW like protein AS86_3338 PF03413 Peptidase propeptide and YPEB domain AS86_3338 PF01447 Thermolysin metallopeptidase, catalytic domain AS86_3338 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS86_3338 PF07504 Fungalysin/Thermolysin Propeptide Motif AS86_3341 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AS86_3341 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AS86_3341 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AS86_3342 PF00403 Heavy-metal-associated domain AS86_3343 PF01022 Bacterial regulatory protein, arsR family AS86_3344 PF13520 Amino acid permease AS86_3345 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS86_3345 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS86_3347 PF07849 Protein of unknown function (DUF1641) AS86_3348 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS86_3348 PF00384 Molybdopterin oxidoreductase AS86_3348 PF00037 4Fe-4S binding domain AS86_3348 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS86_3348 PF01568 Molydopterin dinucleotide binding domain AS86_3349 PF02634 FdhD/NarQ family AS86_3354 PF00072 Response regulator receiver domain AS86_3354 PF00486 Transcriptional regulatory protein, C terminal AS86_3355 PF18698 Histidine kinase sensor domain AS86_3355 PF00672 HAMP domain AS86_3355 PF00512 His Kinase A (phospho-acceptor) domain AS86_3355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3355 PF00989 PAS fold AS86_3359 PF00892 EamA-like transporter family AS86_336 PF09588 YqaJ-like viral recombinase domain AS86_3361 PF00390 Malic enzyme, N-terminal domain AS86_3361 PF03949 Malic enzyme, NAD binding domain AS86_3362 PF03390 2-hydroxycarboxylate transporter family AS86_3363 PF00072 Response regulator receiver domain AS86_3364 PF00989 PAS fold AS86_3364 PF17203 Single cache domain 3 AS86_3364 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS86_3364 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_3365 PF00672 HAMP domain AS86_3365 PF02743 Cache domain AS86_3366 PF13529 Peptidase_C39 like family AS86_3368 PF00512 His Kinase A (phospho-acceptor) domain AS86_3368 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3369 PF00072 Response regulator receiver domain AS86_3369 PF00486 Transcriptional regulatory protein, C terminal AS86_337 PF03837 RecT family AS86_3370 PF00149 Calcineurin-like phosphoesterase AS86_3371 PF13416 Bacterial extracellular solute-binding protein AS86_3372 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3373 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3374 PF17912 MalK OB fold domain AS86_3374 PF00005 ABC transporter AS86_3375 PF04309 Glycerol-3-phosphate responsive antiterminator AS86_3380 PF03600 Citrate transporter AS86_3381 PF00072 Response regulator receiver domain AS86_3381 PF12431 Transcriptional regulator AS86_3382 PF00989 PAS fold AS86_3382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3382 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS86_3382 PF17203 Single cache domain 3 AS86_3383 PF00672 HAMP domain AS86_3383 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_3383 PF02743 Cache domain AS86_3384 PF01145 SPFH domain / Band 7 family AS86_3384 PF15975 Flotillin AS86_3386 PF18496 Collagenase G catalytic helper subdomain AS86_3386 PF01752 Collagenase AS86_3386 PF08453 Peptidase family M9 N-terminal AS86_3387 PF02028 BCCT, betaine/carnitine/choline family transporter AS86_3389 PF04285 Protein of unknown function (DUF444) AS86_3390 PF06798 PrkA serine protein kinase C-terminal domain AS86_3390 PF08298 PrkA AAA domain AS86_3392 PF00563 EAL domain AS86_3392 PF03707 Bacterial signalling protein N terminal repeat AS86_3392 PF00990 Diguanylate cyclase, GGDEF domain AS86_3393 PF00588 SpoU rRNA Methylase family AS86_3394 PF12671 Putative amidase domain AS86_3395 PF08331 Domain of unknown function (DUF1730) AS86_3397 PF13462 Thioredoxin AS86_3398 PF00912 Transglycosylase AS86_3398 PF00905 Penicillin binding protein transpeptidase domain AS86_3399 PF00293 NUDIX domain AS86_3399 PF09297 NADH pyrophosphatase zinc ribbon domain AS86_34 PF04296 Protein of unknown function (DUF448) AS86_3400 PF01709 Transcriptional regulator AS86_341 PF01695 IstB-like ATP binding protein AS86_3423 PF11023 Zinc-ribbon containing domain AS86_3425 PF01475 Ferric uptake regulator family AS86_3426 PF00578 AhpC/TSA family AS86_3427 PF07885 Ion channel AS86_3430 PF00005 ABC transporter AS86_3431 PF00202 Aminotransferase class-III AS86_3432 PF00310 Glutamine amidotransferases class-II AS86_3432 PF01645 Conserved region in glutamate synthase AS86_3432 PF04898 Glutamate synthase central domain AS86_3432 PF01493 GXGXG motif AS86_3433 PF06081 Aromatic acid exporter family member 1 AS86_3434 PF00005 ABC transporter AS86_3434 PF00664 ABC transporter transmembrane region AS86_3435 PF04167 Protein of unknown function (DUF402) AS86_3436 PF14182 YgaB-like protein AS86_3437 PF04259 Small, acid-soluble spore protein, gamma-type AS86_3439 PF14815 NUDIX domain AS86_3439 PF00730 HhH-GPD superfamily base excision DNA repair protein AS86_3440 PF04307 LexA-binding, inner membrane-associated putative hydrolase AS86_3441 PF14043 WVELL protein AS86_3442 PF08176 Small acid-soluble spore protein K family AS86_3445 PF02631 RecX family AS86_3446 PF01370 NAD dependent epimerase/dehydratase family AS86_3446 PF08338 Domain of unknown function (DUF1731) AS86_3447 PF01979 Amidohydrolase family AS86_3450 PF04101 Glycosyltransferase family 28 C-terminal domain AS86_3450 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AS86_3451 PF04055 Radical SAM superfamily AS86_3452 PF01228 Glycine radical AS86_3452 PF02901 Pyruvate formate lyase-like AS86_3453 PF00535 Glycosyl transferase family 2 AS86_3454 PF00551 Formyl transferase AS86_3454 PF02911 Formyl transferase, C-terminal domain AS86_3454 PF01370 NAD dependent epimerase/dehydratase family AS86_3455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS86_3455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS86_3455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS86_3456 PF00535 Glycosyl transferase family 2 AS86_3459 PF00144 Beta-lactamase AS86_3460 PF00367 phosphotransferase system, EIIB AS86_3460 PF02378 Phosphotransferase system, EIIC AS86_3461 PF04960 Glutaminase AS86_3466 PF01546 Peptidase family M20/M25/M40 AS86_3466 PF07687 Peptidase dimerisation domain AS86_3467 PF00324 Amino acid permease AS86_3469 PF02954 Bacterial regulatory protein, Fis family AS86_3469 PF00158 Sigma-54 interaction domain AS86_3469 PF13426 PAS domain AS86_347 PF00140 Sigma-70 factor, region 1.2 AS86_347 PF04542 Sigma-70 region 2 AS86_347 PF04545 Sigma-70, region 4 AS86_3471 PF01416 tRNA pseudouridine synthase AS86_3473 PF05958 tRNA (Uracil-5-)-methyltransferase AS86_3473 PF01938 TRAM domain AS86_3474 PF00730 HhH-GPD superfamily base excision DNA repair protein AS86_3475 PF01522 Polysaccharide deacetylase AS86_3476 PF05681 Fumarate hydratase (Fumerase) AS86_3476 PF05683 Fumarase C-terminus AS86_3478 PF04055 Radical SAM superfamily AS86_3478 PF08756 YfkB-like domain AS86_3479 PF14167 YfkD-like protein AS86_3480 PF01699 Sodium/calcium exchanger protein AS86_3481 PF16242 Pyridoxamine 5'-phosphate oxidase like AS86_3484 PF09335 SNARE associated Golgi protein AS86_3486 PF10502 Signal peptidase, peptidase S26 AS86_3488 PF00892 EamA-like transporter family AS86_3490 PF03631 Virulence factor BrkB AS86_3492 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS86_3493 PF06569 Protein of unknown function (DUF1128) AS86_3494 PF00690 Cation transporter/ATPase, N-terminus AS86_3494 PF00689 Cation transporting ATPase, C-terminus AS86_3495 PF05816 Toxic anion resistance protein (TelA) AS86_3496 PF14266 Putative component of 'biosynthetic module' AS86_3497 PF03741 Integral membrane protein TerC family AS86_3498 PF02342 TerD domain AS86_3499 PF02342 TerD domain AS86_35 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AS86_350 PF02498 BRO family, N-terminal domain AS86_350 PF10548 P22AR C-terminal domain AS86_3500 PF02342 TerD domain AS86_3501 PF00480 ROK family AS86_3503 PF03129 Anticodon binding domain AS86_3503 PF09180 Prolyl-tRNA synthetase, C-terminal AS86_3503 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS86_3506 PF11700 Vacuole effluxer Atg22 like AS86_3509 PF08360 QacR-like protein, C-terminal region AS86_3509 PF00440 Bacterial regulatory proteins, tetR family AS86_3514 PF00704 Glycosyl hydrolases family 18 AS86_3514 PF00041 Fibronectin type III domain AS86_3515 PF12848 ABC transporter AS86_3515 PF00005 ABC transporter AS86_3516 PF00005 ABC transporter AS86_3518 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3519 PF01910 Thiamine-binding protein AS86_3520 PF00975 Thioesterase domain AS86_3520 PF00550 Phosphopantetheine attachment site AS86_3520 PF00501 AMP-binding enzyme AS86_3520 PF13193 AMP-binding enzyme C-terminal domain AS86_3520 PF00668 Condensation domain AS86_3521 PF00672 HAMP domain AS86_3521 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_3522 PF03605 Anaerobic c4-dicarboxylate membrane transporter AS86_3523 PF02581 Thiamine monophosphate synthase AS86_3524 PF02110 Hydroxyethylthiazole kinase family AS86_3525 PF01131 DNA topoisomerase AS86_3525 PF01751 Toprim domain AS86_3526 PF01061 ABC-2 type transporter AS86_3527 PF03372 Endonuclease/Exonuclease/phosphatase family AS86_3528 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS86_3528 PF00367 phosphotransferase system, EIIB AS86_3528 PF02378 Phosphotransferase system, EIIC AS86_3529 PF00128 Alpha amylase, catalytic domain AS86_3529 PF16657 Maltogenic Amylase, C-terminal domain AS86_3530 PF01565 FAD binding domain AS86_3530 PF08031 Berberine and berberine like AS86_3532 PF13545 Crp-like helix-turn-helix domain AS86_3532 PF00027 Cyclic nucleotide-binding domain AS86_3533 PF00696 Amino acid kinase family AS86_3534 PF13520 Amino acid permease AS86_3535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS86_3535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS86_3537 PF02863 Arginine repressor, C-terminal domain AS86_3537 PF01316 Arginine repressor, DNA binding domain AS86_3538 PF12729 Four helix bundle sensory module for signal transduction AS86_3538 PF00672 HAMP domain AS86_3538 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_3539 PF00005 ABC transporter AS86_3540 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS86_3541 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3543 PF00355 Rieske [2Fe-2S] domain AS86_3543 PF01266 FAD dependent oxidoreductase AS86_3544 PF07690 Major Facilitator Superfamily AS86_3545 PF10127 RNA repair pathway DNA polymerase beta family AS86_3549 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3549 PF00989 PAS fold AS86_3549 PF13188 PAS domain AS86_3549 PF00512 His Kinase A (phospho-acceptor) domain AS86_3549 PF13426 PAS domain AS86_355 PF02796 Helix-turn-helix domain of resolvase AS86_355 PF00239 Resolvase, N terminal domain AS86_3554 PF12728 Helix-turn-helix domain AS86_3556 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_3557 PF01497 Periplasmic binding protein AS86_3558 PF01032 FecCD transport family AS86_3559 PF01032 FecCD transport family AS86_3561 PF13333 Integrase core domain AS86_3561 PF13276 HTH-like domain AS86_3561 PF00665 Integrase core domain AS86_3562 PF00596 Class II Aldolase and Adducin N-terminal domain AS86_3564 PF01636 Phosphotransferase enzyme family AS86_3565 PF00578 AhpC/TSA family AS86_3566 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_3566 PF13192 Thioredoxin domain AS86_3568 PF07687 Peptidase dimerisation domain AS86_3568 PF01546 Peptidase family M20/M25/M40 AS86_3571 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AS86_3571 PF13378 Enolase C-terminal domain-like AS86_3575 PF07308 Protein of unknown function (DUF1456) AS86_3576 PF01207 Dihydrouridine synthase (Dus) AS86_3577 PF01938 TRAM domain AS86_3577 PF05958 tRNA (Uracil-5-)-methyltransferase AS86_3577 PF13847 Methyltransferase domain AS86_3578 PF01773 Na+ dependent nucleoside transporter N-terminus AS86_3578 PF07670 Nucleoside recognition AS86_3578 PF07662 Na+ dependent nucleoside transporter C-terminus AS86_3582 PF02073 Thermophilic metalloprotease (M29) AS86_3584 PF00893 Small Multidrug Resistance protein AS86_3585 PF00171 Aldehyde dehydrogenase family AS86_3586 PF00158 Sigma-54 interaction domain AS86_3587 PF00202 Aminotransferase class-III AS86_3588 PF13419 Haloacid dehalogenase-like hydrolase AS86_3589 PF00781 Diacylglycerol kinase catalytic domain AS86_3590 PF02637 GatB domain AS86_3590 PF02934 GatB/GatE catalytic domain AS86_3591 PF01425 Amidase AS86_3592 PF02686 Glu-tRNAGln amidotransferase C subunit AS86_3593 PF05360 yiaA/B two helix domain AS86_3594 PF01047 MarR family AS86_3595 PF02374 Anion-transporting ATPase AS86_3595 PF17886 HSP20-like domain found in ArsA AS86_3598 PF03180 NLPA lipoprotein AS86_3599 PF00528 Binding-protein-dependent transport system inner membrane component AS86_36 PF04760 Translation initiation factor IF-2, N-terminal region AS86_36 PF11987 Translation-initiation factor 2 AS86_36 PF00009 Elongation factor Tu GTP binding domain AS86_3600 PF09383 NIL domain AS86_3600 PF00005 ABC transporter AS86_3601 PF00857 Isochorismatase family AS86_3602 PF00171 Aldehyde dehydrogenase family AS86_3603 PF01925 Sulfite exporter TauE/SafE AS86_3604 PF07537 CamS sex pheromone cAM373 precursor AS86_3605 PF00533 BRCA1 C Terminus (BRCT) domain AS86_3605 PF01653 NAD-dependent DNA ligase adenylation domain AS86_3605 PF12826 Helix-hairpin-helix motif AS86_3605 PF03120 NAD-dependent DNA ligase OB-fold domain AS86_3605 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AS86_3606 PF13361 UvrD-like helicase C-terminal domain AS86_3606 PF00580 UvrD/REP helicase N-terminal domain AS86_3607 PF01884 PcrB family AS86_3611 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AS86_3611 PF02844 Phosphoribosylglycinamide synthetase, N domain AS86_3611 PF02843 Phosphoribosylglycinamide synthetase, C domain AS86_3612 PF02142 MGS-like domain AS86_3612 PF01808 AICARFT/IMPCHase bienzyme AS86_3613 PF00551 Formyl transferase AS86_3614 PF00586 AIR synthase related protein, N-terminal domain AS86_3614 PF02769 AIR synthase related protein, C-terminal domain AS86_3615 PF00156 Phosphoribosyl transferase domain AS86_3616 PF02769 AIR synthase related protein, C-terminal domain AS86_3616 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AS86_3616 PF00586 AIR synthase related protein, N-terminal domain AS86_3618 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AS86_3619 PF01259 SAICAR synthetase AS86_3620 PF10397 Adenylosuccinate lyase C-terminus AS86_3620 PF00206 Lyase AS86_3621 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AS86_3621 PF02222 ATP-grasp domain AS86_3622 PF00731 AIR carboxylase AS86_3628 PF00892 EamA-like transporter family AS86_3633 PF00486 Transcriptional regulatory protein, C terminal AS86_3633 PF00072 Response regulator receiver domain AS86_3634 PF00512 His Kinase A (phospho-acceptor) domain AS86_3634 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3635 PF00005 ABC transporter AS86_3637 PF02673 Bacitracin resistance protein BacA AS86_3644 PF01323 DSBA-like thioredoxin domain AS86_3650 PF16736 Single Cache-like AS86_3650 PF00989 PAS fold AS86_3650 PF00512 His Kinase A (phospho-acceptor) domain AS86_3650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3651 PF00486 Transcriptional regulatory protein, C terminal AS86_3651 PF00072 Response regulator receiver domain AS86_3652 PF00860 Permease family AS86_3654 PF00149 Calcineurin-like phosphoesterase AS86_3657 PF02486 Replication initiation factor AS86_3657 PF18106 Rolling Circle replication initiation protein N-terminal domain AS86_3667 PF00117 Glutamine amidotransferase class-I AS86_3667 PF02540 NAD synthase AS86_3667 PF00958 GMP synthase C terminal domain AS86_3669 PF04740 LXG domain of WXG superfamily AS86_3669 PF14436 Bacterial EndoU nuclease AS86_3684 PF14659 Phage integrase, N-terminal SAM-like domain AS86_3684 PF00589 Phage integrase family AS86_3685 PF00118 TCP-1/cpn60 chaperonin family AS86_3686 PF00166 Chaperonin 10 Kd subunit AS86_3687 PF02517 CPBP intramembrane metalloprotease AS86_3689 PF02629 CoA binding domain AS86_3689 PF06971 Putative DNA-binding protein N-terminus AS86_3690 PF12848 ABC transporter AS86_3690 PF00005 ABC transporter AS86_3690 PF16326 ABC transporter C-terminal domain AS86_3691 PF00814 Glycoprotease family AS86_3692 PF00583 Acetyltransferase (GNAT) family AS86_3693 PF00814 Glycoprotease family AS86_3694 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AS86_37 PF04456 Protein of unknown function (DUF503) AS86_3713 PF10263 SprT-like family AS86_3713 PF17283 SprT-like zinc ribbon domain AS86_3714 PF16921 Tex protein YqgF-like domain AS86_3714 PF17674 HHH domain AS86_3714 PF00575 S1 RNA binding domain AS86_3714 PF09371 Tex-like protein N-terminal domain AS86_3715 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AS86_3716 PF01402 Ribbon-helix-helix protein, copG family AS86_3717 PF00842 Alanine racemase, C-terminal domain AS86_3717 PF01168 Alanine racemase, N-terminal domain AS86_3719 PF01648 4'-phosphopantetheinyl transferase superfamily AS86_3720 PF03851 UV-endonuclease UvdE AS86_3721 PF01694 Rhomboid family AS86_3722 PF00270 DEAD/DEAH box helicase AS86_3722 PF00271 Helicase conserved C-terminal domain AS86_3723 PF01225 Mur ligase family, catalytic domain AS86_3723 PF08245 Mur ligase middle domain AS86_3723 PF02875 Mur ligase family, glutamate ligase domain AS86_3724 PF01820 D-ala D-ala ligase N-terminus AS86_3724 PF07478 D-ala D-ala ligase C-terminus AS86_3725 PF07690 Major Facilitator Superfamily AS86_3726 PF13520 Amino acid permease AS86_3728 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS86_3729 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_3735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS86_3735 PF00005 ABC transporter AS86_3736 PF00005 ABC transporter AS86_3736 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS86_3738 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3739 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_3741 PF12848 ABC transporter AS86_3741 PF00005 ABC transporter AS86_3741 PF16326 ABC transporter C-terminal domain AS86_3745 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) AS86_3749 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_3749 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_375 PF01476 LysM domain AS86_375 PF01471 Putative peptidoglycan binding domain AS86_375 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_3751 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS86_3751 PF00356 Bacterial regulatory proteins, lacI family AS86_3753 PF01553 Acyltransferase AS86_3755 PF14142 YrzO-like protein AS86_3756 PF00892 EamA-like transporter family AS86_3757 PF03466 LysR substrate binding domain AS86_3757 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_3759 PF12727 PBP superfamily domain AS86_3759 PF12728 Helix-turn-helix domain AS86_3761 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3762 PF06800 Sugar transport protein AS86_3764 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS86_3764 PF03807 NADP oxidoreductase coenzyme F420-dependent AS86_3765 PF00248 Aldo/keto reductase family AS86_3766 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_3767 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_3770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS86_3771 PF00005 ABC transporter AS86_3771 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS86_3772 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS86_3772 PF00005 ABC transporter AS86_3773 PF12911 N-terminal TM domain of oligopeptide transport permease C AS86_3773 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3774 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3778 PF07690 Major Facilitator Superfamily AS86_3780 PF07690 Major Facilitator Superfamily AS86_3781 PF01565 FAD binding domain AS86_3783 PF08240 Alcohol dehydrogenase GroES-like domain AS86_3783 PF00107 Zinc-binding dehydrogenase AS86_3784 PF03180 NLPA lipoprotein AS86_3785 PF00005 ABC transporter AS86_3785 PF09383 NIL domain AS86_3786 PF00528 Binding-protein-dependent transport system inner membrane component AS86_3790 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AS86_3790 PF00326 Prolyl oligopeptidase family AS86_3791 PF01380 SIS domain AS86_3792 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS86_3792 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS86_3792 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS86_3792 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS86_3793 PF07949 YbbR-like protein AS86_3794 PF02457 DisA bacterial checkpoint controller nucleotide-binding AS86_3795 PF00491 Arginase family AS86_3796 PF02595 Glycerate kinase family AS86_38 PF02033 Ribosome-binding factor A AS86_3811 PF01522 Polysaccharide deacetylase AS86_3812 PF14089 KinB-signalling pathway activation in sporulation AS86_3813 PF17898 Spore germination GerD central core domain AS86_3814 PF10609 NUBPL iron-transfer P-loop NTPase AS86_3815 PF01520 N-acetylmuramoyl-L-alanine amidase AS86_3817 PF00380 Ribosomal protein S9/S16 AS86_3818 PF00572 Ribosomal protein L13 AS86_3819 PF01416 tRNA pseudouridine synthase AS86_3820 PF02361 Cobalt transport protein AS86_3821 PF00005 ABC transporter AS86_3822 PF00005 ABC transporter AS86_3823 PF01196 Ribosomal protein L17 AS86_3824 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AS86_3824 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AS86_3824 PF01000 RNA polymerase Rpb3/RpoA insert domain AS86_3825 PF00411 Ribosomal protein S11 AS86_3826 PF00416 Ribosomal protein S13/S18 AS86_3827 PF00444 Ribosomal protein L36 AS86_3828 PF01176 Translation initiation factor 1A / IF-1 AS86_3829 PF00557 Metallopeptidase family M24 AS86_383 PF00037 4Fe-4S binding domain AS86_383 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS86_383 PF00384 Molybdopterin oxidoreductase AS86_383 PF01568 Molydopterin dinucleotide binding domain AS86_383 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS86_3830 PF05191 Adenylate kinase, active site lid AS86_3831 PF00344 SecY translocase AS86_3832 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AS86_3833 PF00327 Ribosomal protein L30p/L7e AS86_3834 PF03719 Ribosomal protein S5, C-terminal domain AS86_3834 PF00333 Ribosomal protein S5, N-terminal domain AS86_3835 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AS86_3836 PF00347 Ribosomal protein L6 AS86_3837 PF00410 Ribosomal protein S8 AS86_3838 PF00253 Ribosomal protein S14p/S29e AS86_3839 PF00281 Ribosomal protein L5 AS86_3839 PF00673 ribosomal L5P family C-terminus AS86_384 PF07849 Protein of unknown function (DUF1641) AS86_3840 PF00467 KOW motif AS86_3840 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AS86_3841 PF00238 Ribosomal protein L14p/L23e AS86_3842 PF00366 Ribosomal protein S17 AS86_3843 PF00831 Ribosomal L29 protein AS86_3844 PF00252 Ribosomal protein L16p/L10e AS86_3845 PF07650 KH domain AS86_3845 PF00189 Ribosomal protein S3, C-terminal domain AS86_3846 PF00237 Ribosomal protein L22p/L17e AS86_3847 PF00203 Ribosomal protein S19 AS86_3848 PF00181 Ribosomal Proteins L2, RNA binding domain AS86_3848 PF03947 Ribosomal Proteins L2, C-terminal domain AS86_3849 PF00276 Ribosomal protein L23 AS86_385 PF10057 Uncharacterized conserved protein (DUF2294) AS86_3850 PF00573 Ribosomal protein L4/L1 family AS86_3851 PF00297 Ribosomal protein L3 AS86_3852 PF00338 Ribosomal protein S10p/S20e AS86_3853 PF03144 Elongation factor Tu domain 2 AS86_3853 PF00009 Elongation factor Tu GTP binding domain AS86_3853 PF03143 Elongation factor Tu C-terminal domain AS86_3854 PF03764 Elongation factor G, domain IV AS86_3854 PF03144 Elongation factor Tu domain 2 AS86_3854 PF00009 Elongation factor Tu GTP binding domain AS86_3854 PF00679 Elongation factor G C-terminus AS86_3854 PF14492 Elongation Factor G, domain II AS86_3855 PF00177 Ribosomal protein S7p/S5e AS86_3856 PF00164 Ribosomal protein S12/S23 AS86_3857 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AS86_3859 PF04560 RNA polymerase Rpb2, domain 7 AS86_3859 PF00562 RNA polymerase Rpb2, domain 6 AS86_3859 PF10385 RNA polymerase beta subunit external 1 domain AS86_3859 PF04565 RNA polymerase Rpb2, domain 3 AS86_3859 PF04561 RNA polymerase Rpb2, domain 2 AS86_3859 PF04563 RNA polymerase beta subunit AS86_386 PF02634 FdhD/NarQ family AS86_3860 PF05175 Methyltransferase small domain AS86_3861 PF00542 Ribosomal protein L7/L12 C-terminal domain AS86_3861 PF16320 Ribosomal protein L7/L12 dimerisation domain AS86_3862 PF00466 Ribosomal protein L10 AS86_3863 PF00687 Ribosomal protein L1p/L10e family AS86_3864 PF00298 Ribosomal protein L11, RNA binding domain AS86_3864 PF03946 Ribosomal protein L11, N-terminal domain AS86_3865 PF00467 KOW motif AS86_3865 PF02357 Transcription termination factor nusG AS86_3866 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AS86_3867 PF04542 Sigma-70 region 2 AS86_3867 PF08281 Sigma-70, region 4 AS86_3868 PF05991 YacP-like NYN domain AS86_3869 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS86_3869 PF00588 SpoU rRNA Methylase family AS86_387 PF06463 Molybdenum Cofactor Synthesis C AS86_387 PF04055 Radical SAM superfamily AS86_3870 PF00636 Ribonuclease III domain AS86_3871 PF09190 DALR domain AS86_3871 PF01406 tRNA synthetases class I (C) catalytic domain AS86_3872 PF06426 Serine acetyltransferase, N-terminal AS86_3872 PF00132 Bacterial transferase hexapeptide (six repeats) AS86_3873 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS86_3874 PF02542 YgbB family AS86_3875 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AS86_3877 PF02457 DisA bacterial checkpoint controller nucleotide-binding AS86_3877 PF10635 DisA bacterial checkpoint controller linker region AS86_3878 PF18073 Rubredoxin metal binding domain AS86_3879 PF10431 C-terminal, D2-small domain, of ClpB protein AS86_3879 PF00004 ATPase family associated with various cellular activities (AAA) AS86_3879 PF02861 Clp amino terminal domain, pathogenicity island component AS86_3879 PF17871 AAA lid domain AS86_3879 PF07724 AAA domain (Cdc48 subfamily) AS86_388 PF01226 Formate/nitrite transporter AS86_3880 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AS86_3881 PF02151 UvrB/uvrC motif AS86_3882 PF17727 CtsR C-terminal dimerization domain AS86_3882 PF05848 CtsR N-terminal HTH domain AS86_389 PF00899 ThiF family AS86_39 PF01509 TruB family pseudouridylate synthase (N terminal domain) AS86_39 PF16198 tRNA pseudouridylate synthase B C-terminal domain AS86_390 PF03453 MoeA N-terminal region (domain I and II) AS86_390 PF03454 MoeA C-terminal region (domain IV) AS86_390 PF00994 Probable molybdopterin binding domain AS86_3902 PF00152 tRNA synthetases class II (D, K and N) AS86_3902 PF01336 OB-fold nucleic acid binding domain AS86_3903 PF01207 Dihydrouridine synthase (Dus) AS86_3904 PF01381 Helix-turn-helix AS86_3905 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AS86_3906 PF02152 Dihydroneopterin aldolase AS86_3907 PF00809 Pterin binding enzyme AS86_3908 PF01063 Amino-transferase class IV AS86_3909 PF00117 Glutamine amidotransferase class-I AS86_391 PF02391 MoaE protein AS86_3910 PF04715 Anthranilate synthase component I, N terminal region AS86_3910 PF00425 chorismate binding enzyme AS86_3911 PF00291 Pyridoxal-phosphate dependent enzyme AS86_3912 PF01430 Hsp33 protein AS86_3913 PF03309 Type III pantothenate kinase AS86_3914 PF00004 ATPase family associated with various cellular activities (AAA) AS86_3914 PF17862 AAA+ lid domain AS86_3914 PF01434 Peptidase family M41 AS86_3914 PF06480 FtsH Extracellular AS86_3916 PF09179 TilS substrate binding domain AS86_3916 PF01171 PP-loop family AS86_3916 PF11734 TilS substrate C-terminal domain AS86_3917 PF07228 Stage II sporulation protein E (SpoIIE) AS86_3920 PF00575 S1 RNA binding domain AS86_3922 PF09578 Spore cortex protein YabQ (Spore_YabQ) AS86_3923 PF07873 YabP family AS86_3924 PF01479 S4 domain AS86_3925 PF03819 MazG nucleotide pyrophosphohydrolase domain AS86_3925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS86_3926 PF14667 Polysaccharide biosynthesis C-terminal domain AS86_3926 PF01943 Polysaccharide biosynthesis protein AS86_3927 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AS86_3927 PF15714 Stage V sporulation protein T C-terminal, transcription factor AS86_3928 PF00270 DEAD/DEAH box helicase AS86_3928 PF00271 Helicase conserved C-terminal domain AS86_3928 PF03461 TRCF domain AS86_3928 PF02559 CarD-like/TRCF domain AS86_3928 PF17757 UvrB interaction domain AS86_393 PF10609 NUBPL iron-transfer P-loop NTPase AS86_3930 PF01195 Peptidyl-tRNA hydrolase AS86_3931 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AS86_3931 PF14572 Phosphoribosyl synthetase-associated domain AS86_3932 PF00132 Bacterial transferase hexapeptide (six repeats) AS86_3932 PF00483 Nucleotidyl transferase AS86_3933 PF04026 SpoVG AS86_3934 PF01042 Endoribonuclease L-PSP AS86_3935 PF00156 Phosphoribosyl transferase domain AS86_3935 PF09182 Bacterial purine repressor, N-terminal AS86_3936 PF08544 GHMP kinases C terminal AS86_3936 PF00288 GHMP kinases N terminal domain AS86_3937 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS86_3938 PF06257 Biofilm formation stimulator VEG AS86_3939 PF05582 YabG peptidase U57 AS86_3940 PF00398 Ribosomal RNA adenine dimethylase AS86_3941 PF13331 Domain of unknown function (DUF4093) AS86_3941 PF13662 Toprim domain AS86_3942 PF01026 TatD related DNase AS86_3943 PF09334 tRNA synthetases class I (M) AS86_3943 PF08264 Anticodon-binding domain of tRNA AS86_3943 PF01588 Putative tRNA binding domain AS86_3944 PF18277 AbrB C-terminal domain AS86_3944 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AS86_3945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS86_3946 PF01541 GIY-YIG catalytic domain AS86_3947 PF05175 Methyltransferase small domain AS86_3948 PF06156 Initiation control protein YabA AS86_3949 PF04468 PSP1 C-terminal conserved region AS86_3950 PF09115 DNA polymerase III, delta subunit, C terminal AS86_3951 PF02223 Thymidylate kinase AS86_3952 PF01276 Orn/Lys/Arg decarboxylase, major domain AS86_3952 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AS86_396 PF06961 Protein of unknown function (DUF1294) AS86_3960 PF07441 SigmaK-factor processing regulatory protein BofA AS86_3961 PF10704 Protein of unknown function (DUF2508) AS86_3962 PF02132 RecR protein AS86_3962 PF13662 Toprim domain AS86_3963 PF02575 YbaB/EbfC DNA-binding family AS86_3964 PF12169 DNA polymerase III subunits gamma and tau domain III AS86_3965 PF14437 MafB19-like deaminase AS86_3966 PF00857 Isochorismatase family AS86_3967 PF01712 Deoxynucleoside kinase AS86_3968 PF01712 Deoxynucleoside kinase AS86_397 PF00892 EamA-like transporter family AS86_3971 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS86_3971 PF02403 Seryl-tRNA synthetase N-terminal domain AS86_3972 PF01174 SNO glutamine amidotransferase family AS86_3973 PF01680 SOR/SNZ family AS86_3974 PF00768 D-alanyl-D-alanine carboxypeptidase AS86_3974 PF07943 Penicillin-binding protein 5, C-terminal domain AS86_3975 PF00478 IMP dehydrogenase / GMP reductase domain AS86_3975 PF00571 CBS domain AS86_3976 PF14175 YaaC-like Protein AS86_398 PF02681 Divergent PAP2 family AS86_3983 PF03989 DNA gyrase C-terminal domain, beta-propeller AS86_3983 PF00521 DNA gyrase/topoisomerase IV, subunit A AS86_3984 PF00204 DNA gyrase B AS86_3984 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_3984 PF00986 DNA gyrase B subunit, carboxyl terminus AS86_3984 PF01751 Toprim domain AS86_3985 PF02463 RecF/RecN/SMC N terminal domain AS86_3987 PF00712 DNA polymerase III beta subunit, N-terminal domain AS86_3987 PF02768 DNA polymerase III beta subunit, C-terminal domain AS86_3987 PF02767 DNA polymerase III beta subunit, central domain AS86_3988 PF08299 Bacterial dnaA protein helix-turn-helix AS86_3988 PF00308 Bacterial dnaA protein AS86_3988 PF11638 DnaA N-terminal domain AS86_3989 PF00468 Ribosomal protein L34 AS86_399 PF13249 Squalene-hopene cyclase N-terminal domain AS86_399 PF13243 Squalene-hopene cyclase C-terminal domain AS86_3990 PF00825 Ribonuclease P AS86_3991 PF02096 60Kd inner membrane protein AS86_3992 PF01424 R3H domain AS86_3992 PF14804 Jag N-terminus AS86_3993 PF01926 50S ribosome-binding GTPase AS86_3993 PF12631 MnmE helical domain AS86_3993 PF10396 GTP-binding protein TrmE N-terminus AS86_3994 PF01134 Glucose inhibited division protein A AS86_3994 PF13932 GidA associated domain AS86_3995 PF02527 rRNA small subunit methyltransferase G AS86_3996 PF17762 HTH domain found in ParB protein AS86_3996 PF02195 ParB-like nuclease domain AS86_3997 PF13614 AAA domain AS86_3998 PF02195 ParB-like nuclease domain AS86_3998 PF17762 HTH domain found in ParB protein AS86_3999 PF06866 Protein of unknown function (DUF1256) AS86_4 PF02978 Signal peptide binding domain AS86_4 PF02881 SRP54-type protein, helical bundle domain AS86_4 PF00448 SRP54-type protein, GTPase domain AS86_40 PF06574 FAD synthetase AS86_40 PF01687 Riboflavin kinase AS86_400 PF14151 YfhD-like protein AS86_4000 PF00924 Mechanosensitive ion channel AS86_4001 PF06107 Bacterial protein of unknown function (DUF951) AS86_4002 PF01926 50S ribosome-binding GTPase AS86_4002 PF06071 Protein of unknown function (DUF933) AS86_4003 PF01250 Ribosomal protein S6 AS86_4004 PF00436 Single-strand binding protein family AS86_4005 PF01084 Ribosomal protein S18 AS86_4006 PF09991 Predicted membrane protein (DUF2232) AS86_4007 PF02272 DHHA1 domain AS86_4007 PF01368 DHH family AS86_4008 PF01281 Ribosomal protein L9, N-terminal domain AS86_4008 PF03948 Ribosomal protein L9, C-terminal domain AS86_4009 PF03796 DnaB-like helicase C terminal domain AS86_4009 PF00772 DnaB-like helicase N terminal domain AS86_4010 PF00709 Adenylosuccinate synthetase AS86_4015 PF00486 Transcriptional regulatory protein, C terminal AS86_4015 PF00072 Response regulator receiver domain AS86_4016 PF13426 PAS domain AS86_4016 PF00512 His Kinase A (phospho-acceptor) domain AS86_4016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4016 PF00672 HAMP domain AS86_4018 PF09648 YycH protein AS86_4019 PF00753 Metallo-beta-lactamase superfamily AS86_402 PF00171 Aldehyde dehydrogenase family AS86_4020 PF13180 PDZ domain AS86_4022 PF02590 Predicted SPOUT methyltransferase AS86_4023 PF02223 Thymidylate kinase AS86_4033 PF02796 Helix-turn-helix domain of resolvase AS86_4033 PF00239 Resolvase, N terminal domain AS86_4034 PF01541 GIY-YIG catalytic domain AS86_4034 PF02151 UvrB/uvrC motif AS86_4034 PF08459 UvrC Helix-hairpin-helix N-terminal AS86_4036 PF07508 Recombinase AS86_4036 PF13408 Recombinase zinc beta ribbon domain AS86_4036 PF00239 Resolvase, N terminal domain AS86_404 PF00474 Sodium:solute symporter family AS86_4046 PF07508 Recombinase AS86_4046 PF00239 Resolvase, N terminal domain AS86_4046 PF13408 Recombinase zinc beta ribbon domain AS86_4048 PF13333 Integrase core domain AS86_4048 PF00665 Integrase core domain AS86_4048 PF13276 HTH-like domain AS86_405 PF01156 Inosine-uridine preferring nucleoside hydrolase AS86_4051 PF08439 Oligopeptidase F AS86_4051 PF01432 Peptidase family M3 AS86_4052 PF00478 IMP dehydrogenase / GMP reductase domain AS86_4053 PF03880 DbpA RNA binding domain AS86_4053 PF00271 Helicase conserved C-terminal domain AS86_4053 PF00270 DEAD/DEAH box helicase AS86_4055 PF03006 Haemolysin-III related AS86_4056 PF16363 GDP-mannose 4,6 dehydratase AS86_4059 PF02293 AmiS/UreI family transporter AS86_4061 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS86_4061 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS86_4062 PF02898 Nitric oxide synthase, oxygenase domain AS86_4063 PF02028 BCCT, betaine/carnitine/choline family transporter AS86_4064 PF07690 Major Facilitator Superfamily AS86_4065 PF13492 GAF domain AS86_4065 PF07694 5TMR of 5TMR-LYT AS86_4065 PF06580 Histidine kinase AS86_4065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4066 PF00072 Response regulator receiver domain AS86_4066 PF04397 LytTr DNA-binding domain AS86_4067 PF03788 LrgA family AS86_4068 PF04172 LrgB-like family AS86_4069 PF01594 AI-2E family transporter AS86_407 PF00206 Lyase AS86_407 PF14698 Argininosuccinate lyase C-terminal AS86_4070 PF01625 Peptide methionine sulfoxide reductase AS86_4070 PF01641 SelR domain AS86_4071 PF00873 AcrB/AcrD/AcrF family AS86_4072 PF00440 Bacterial regulatory proteins, tetR family AS86_4073 PF00005 ABC transporter AS86_4073 PF12848 ABC transporter AS86_4074 PF08361 MAATS-type transcriptional repressor, C-terminal region AS86_4074 PF00440 Bacterial regulatory proteins, tetR family AS86_4076 PF00535 Glycosyl transferase family 2 AS86_4077 PF09586 Bacterial membrane protein YfhO AS86_4079 PF00535 Glycosyl transferase family 2 AS86_4082 PF00535 Glycosyl transferase family 2 AS86_4083 PF03061 Thioesterase superfamily AS86_4085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_4086 PF03458 UPF0126 domain AS86_4088 PF00534 Glycosyl transferases group 1 AS86_4088 PF13439 Glycosyltransferase Family 4 AS86_4089 PF03808 Glycosyl transferase WecB/TagA/CpsF family AS86_409 PF00106 short chain dehydrogenase AS86_4090 PF07690 Major Facilitator Superfamily AS86_4091 PF04397 LytTr DNA-binding domain AS86_4091 PF00072 Response regulator receiver domain AS86_4092 PF13722 5TM C-terminal transporter carbon starvation CstA AS86_4092 PF02554 Carbon starvation protein CstA AS86_4093 PF04328 Selenoprotein, putative AS86_4094 PF00990 Diguanylate cyclase, GGDEF domain AS86_4094 PF07694 5TMR of 5TMR-LYT AS86_4095 PF08543 Phosphomethylpyrimidine kinase AS86_4096 PF07730 Histidine kinase AS86_4096 PF13185 GAF domain AS86_4097 PF00072 Response regulator receiver domain AS86_4097 PF00196 Bacterial regulatory proteins, luxR family AS86_4098 PF02525 Flavodoxin-like fold AS86_4099 PF00027 Cyclic nucleotide-binding domain AS86_41 PF00312 Ribosomal protein S15 AS86_4100 PF13419 Haloacid dehalogenase-like hydrolase AS86_4102 PF01053 Cys/Met metabolism PLP-dependent enzyme AS86_4103 PF04204 Homoserine O-succinyltransferase AS86_4104 PF00742 Homoserine dehydrogenase AS86_4104 PF01842 ACT domain AS86_4104 PF03447 Homoserine dehydrogenase, NAD binding domain AS86_4106 PF00356 Bacterial regulatory proteins, lacI family AS86_4106 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS86_4107 PF13472 GDSL-like Lipase/Acylhydrolase family AS86_4108 PF00005 ABC transporter AS86_4109 PF12679 ABC-2 family transporter protein AS86_411 PF00132 Bacterial transferase hexapeptide (six repeats) AS86_4110 PF03167 Uracil DNA glycosylase superfamily AS86_4111 PF12823 Domain of unknown function (DUF3817) AS86_4113 PF00860 Permease family AS86_4114 PF07885 Ion channel AS86_4114 PF02254 TrkA-N domain AS86_4116 PF04241 Protein of unknown function (DUF423) AS86_4117 PF09671 Spore coat protein (Spore_GerQ) AS86_4118 PF07486 Cell Wall Hydrolase AS86_4119 PF07943 Penicillin-binding protein 5, C-terminal domain AS86_4119 PF00768 D-alanyl-D-alanine carboxypeptidase AS86_4121 PF01515 Phosphate acetyl/butaryl transferase AS86_4122 PF03099 Biotin/lipoate A/B protein ligase family AS86_4124 PF07293 Protein of unknown function (DUF1450) AS86_4125 PF01032 FecCD transport family AS86_4126 PF01032 FecCD transport family AS86_4127 PF00005 ABC transporter AS86_4128 PF01497 Periplasmic binding protein AS86_4129 PF01966 HD domain AS86_413 PF00293 NUDIX domain AS86_4130 PF01361 Tautomerase enzyme AS86_4131 PF02163 Peptidase family M50 AS86_4132 PF08741 YwhD family AS86_4133 PF00905 Penicillin binding protein transpeptidase domain AS86_4133 PF00912 Transglycosylase AS86_4134 PF03009 Glycerophosphoryl diester phosphodiesterase family AS86_4135 PF13411 MerR HTH family regulatory protein AS86_4136 PF07690 Major Facilitator Superfamily AS86_4137 PF17284 Spermidine synthase tetramerisation domain AS86_4138 PF00491 Arginase family AS86_4141 PF02016 LD-carboxypeptidase N-terminal domain AS86_4141 PF17676 LD-carboxypeptidase C-terminal domain AS86_4142 PF09148 Domain of unknown function (DUF1934) AS86_4143 PF00750 tRNA synthetases class I (R) AS86_4143 PF05746 DALR anticodon binding domain AS86_4143 PF03485 Arginyl tRNA synthetase N terminal domain AS86_4144 PF04542 Sigma-70 region 2 AS86_4144 PF08281 Sigma-70, region 4 AS86_4148 PF02225 PA domain AS86_4148 PF04389 Peptidase family M28 AS86_415 PF00258 Flavodoxin AS86_4150 PF00557 Metallopeptidase family M24 AS86_4151 PF00005 ABC transporter AS86_4153 PF07730 Histidine kinase AS86_4153 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4154 PF00196 Bacterial regulatory proteins, luxR family AS86_4154 PF00072 Response regulator receiver domain AS86_4155 PF07504 Fungalysin/Thermolysin Propeptide Motif AS86_4155 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS86_4155 PF01447 Thermolysin metallopeptidase, catalytic domain AS86_4155 PF03413 Peptidase propeptide and YPEB domain AS86_4158 PF00563 EAL domain AS86_4158 PF00990 Diguanylate cyclase, GGDEF domain AS86_4158 PF03707 Bacterial signalling protein N terminal repeat AS86_4159 PF03851 UV-endonuclease UvdE AS86_4160 PF13091 PLD-like domain AS86_4169 PF02600 Disulfide bond formation protein DsbB AS86_417 PF00313 'Cold-shock' DNA-binding domain AS86_4170 PF00082 Subtilase family AS86_4177 PF01381 Helix-turn-helix AS86_4178 PF13183 4Fe-4S dicluster domain AS86_4178 PF02754 Cysteine-rich domain AS86_4179 PF02803 Thiolase, C-terminal domain AS86_4179 PF00108 Thiolase, N-terminal domain AS86_4180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS86_4180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS86_4181 PF02770 Acyl-CoA dehydrogenase, middle domain AS86_4181 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS86_4181 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS86_4182 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS86_4182 PF02770 Acyl-CoA dehydrogenase, middle domain AS86_4182 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS86_4184 PF05066 HB1, ASXL, restriction endonuclease HTH domain AS86_4185 PF06418 CTP synthase N-terminus AS86_4185 PF00117 Glutamine amidotransferase class-I AS86_4186 PF10740 Domain of unknown function (DUF2529) AS86_4187 PF00072 Response regulator receiver domain AS86_4188 PF01116 Fructose-bisphosphate aldolase class-II AS86_4189 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS86_4190 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AS86_4191 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS86_4191 PF07498 Rho termination factor, N-terminal domain AS86_4191 PF07497 Rho termination factor, RNA-binding domain AS86_4192 PF01197 Ribosomal protein L31 AS86_4193 PF00265 Thymidine kinase AS86_4194 PF00472 RF-1 domain AS86_4194 PF03462 PCRF domain AS86_4195 PF13847 Methyltransferase domain AS86_4195 PF17827 PrmC N-terminal domain AS86_4196 PF09551 Stage II sporulation protein R (spore_II_R) AS86_4198 PF01300 Telomere recombination AS86_4198 PF03481 Putative GTP-binding controlling metal-binding AS86_4199 PF02659 Putative manganese efflux pump AS86_42 PF03725 3' exoribonuclease family, domain 2 AS86_42 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AS86_42 PF00013 KH domain AS86_42 PF00575 S1 RNA binding domain AS86_42 PF01138 3' exoribonuclease family, domain 1 AS86_4203 PF13333 Integrase core domain AS86_4203 PF00665 Integrase core domain AS86_4203 PF13276 HTH-like domain AS86_4204 PF01613 Flavin reductase like domain AS86_4205 PF07681 DoxX AS86_4206 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS86_4207 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS86_4208 PF02502 Ribose/Galactose Isomerase AS86_4209 PF04260 Protein of unknown function (DUF436) AS86_421 PF13037 Domain of unknown function (DUF3898) AS86_421 PF13039 Protein of unknown function (DUF3900) AS86_4210 PF00464 Serine hydroxymethyltransferase AS86_4213 PF03899 ATP synthase I chain AS86_4214 PF00119 ATP synthase A chain AS86_4215 PF00137 ATP synthase subunit C AS86_4216 PF00430 ATP synthase B/B' CF(0) AS86_4217 PF00213 ATP synthase delta (OSCP) subunit AS86_4218 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS86_4218 PF00306 ATP synthase alpha/beta chain, C terminal domain AS86_4218 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS86_4219 PF00231 ATP synthase AS86_4220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS86_4220 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS86_4221 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AS86_4221 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AS86_4224 PF00990 Diguanylate cyclase, GGDEF domain AS86_4224 PF03707 Bacterial signalling protein N terminal repeat AS86_4224 PF00563 EAL domain AS86_4225 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AS86_4226 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AS86_4227 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AS86_4228 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AS86_4229 PF00146 NADH dehydrogenase AS86_423 PF04294 VanW like protein AS86_4231 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AS86_4232 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AS86_4233 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AS86_4233 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AS86_4233 PF00361 Proton-conducting membrane transporter AS86_4234 PF00361 Proton-conducting membrane transporter AS86_4235 PF00361 Proton-conducting membrane transporter AS86_4236 PF06612 Protein of unknown function (DUF1146) AS86_4238 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS86_4239 PF08486 Stage II sporulation protein AS86_4240 PF00072 Response regulator receiver domain AS86_4240 PF04397 LytTr DNA-binding domain AS86_4241 PF00005 ABC transporter AS86_4243 PF01551 Peptidase family M23 AS86_4244 PF12116 Stage III sporulation protein D AS86_4246 PF07977 FabA-like domain AS86_4247 PF13614 AAA domain AS86_4248 PF02706 Chain length determinant protein AS86_4248 PF13807 G-rich domain on putative tyrosine kinase AS86_4249 PF13614 AAA domain AS86_425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_4251 PF00483 Nucleotidyl transferase AS86_4252 PF02397 Bacterial sugar transferase AS86_4255 PF00534 Glycosyl transferases group 1 AS86_4255 PF13439 Glycosyltransferase Family 4 AS86_4256 PF00535 Glycosyl transferase family 2 AS86_4257 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS86_4257 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS86_4257 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS86_4258 PF16363 GDP-mannose 4,6 dehydratase AS86_4261 PF00486 Transcriptional regulatory protein, C terminal AS86_4261 PF00072 Response regulator receiver domain AS86_4262 PF16736 Single Cache-like AS86_4262 PF00512 His Kinase A (phospho-acceptor) domain AS86_4262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4262 PF00989 PAS fold AS86_4265 PF07690 Major Facilitator Superfamily AS86_4269 PF00005 ABC transporter AS86_427 PF02308 MgtC family AS86_4270 PF02687 FtsX-like permease family AS86_4270 PF12704 MacB-like periplasmic core domain AS86_4272 PF04545 Sigma-70, region 4 AS86_4272 PF04542 Sigma-70 region 2 AS86_4278 PF12419 SNF2 Helicase protein AS86_4278 PF00176 SNF2 family N-terminal domain AS86_4278 PF00271 Helicase conserved C-terminal domain AS86_4279 PF04434 SWIM zinc finger AS86_428 PF01752 Collagenase AS86_428 PF18496 Collagenase G catalytic helper subdomain AS86_428 PF08453 Peptidase family M9 N-terminal AS86_4284 PF06725 3D domain AS86_4284 PF01476 LysM domain AS86_4285 PF02028 BCCT, betaine/carnitine/choline family transporter AS86_4289 PF07662 Na+ dependent nucleoside transporter C-terminus AS86_4289 PF01773 Na+ dependent nucleoside transporter N-terminus AS86_429 PF00512 His Kinase A (phospho-acceptor) domain AS86_429 PF00989 PAS fold AS86_429 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4291 PF01476 LysM domain AS86_4291 PF00877 NlpC/P60 family AS86_4292 PF01063 Amino-transferase class IV AS86_4293 PF00884 Sulfatase AS86_4295 PF09988 Uncharacterized metal-binding protein (DUF2227) AS86_4297 PF02652 L-lactate permease AS86_4298 PF01964 Radical SAM ThiC family AS86_4298 PF13667 ThiC-associated domain AS86_4299 PF02040 Arsenical pump membrane protein AS86_43 PF01522 Polysaccharide deacetylase AS86_4300 PF02322 Cytochrome bd terminal oxidase subunit II AS86_4301 PF01654 Cytochrome bd terminal oxidase subunit I AS86_4304 PF03466 LysR substrate binding domain AS86_4304 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_4308 PF00375 Sodium:dicarboxylate symporter family AS86_4309 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS86_4310 PF02378 Phosphotransferase system, EIIC AS86_4311 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AS86_4312 PF02675 S-adenosylmethionine decarboxylase AS86_4314 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS86_4315 PF02378 Phosphotransferase system, EIIC AS86_4316 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AS86_4317 PF02056 Family 4 glycosyl hydrolase AS86_4317 PF11975 Family 4 glycosyl hydrolase C-terminal domain AS86_4318 PF04794 YdjC-like protein AS86_4319 PF02417 Chromate transporter AS86_4321 PF00158 Sigma-54 interaction domain AS86_4321 PF03610 PTS system fructose IIA component AS86_4321 PF00874 PRD domain AS86_4323 PF00953 Glycosyl transferase family 4 AS86_4324 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS86_4324 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS86_4324 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS86_4325 PF02350 UDP-N-acetylglucosamine 2-epimerase AS86_4326 PF03816 Cell envelope-related transcriptional attenuator domain AS86_4327 PF01205 Uncharacterized protein family UPF0029 AS86_4327 PF09186 Domain of unknown function (DUF1949) AS86_4328 PF02645 Uncharacterised protein, DegV family COG1307 AS86_4329 PF01638 HxlR-like helix-turn-helix AS86_4330 PF01476 LysM domain AS86_4330 PF00877 NlpC/P60 family AS86_4331 PF00271 Helicase conserved C-terminal domain AS86_4331 PF04851 Type III restriction enzyme, res subunit AS86_4333 PF00313 'Cold-shock' DNA-binding domain AS86_4334 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AS86_4334 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AS86_4335 PF07516 SecA Wing and Scaffold domain AS86_4335 PF02810 SEC-C motif AS86_4335 PF07517 SecA DEAD-like domain AS86_4335 PF00271 Helicase conserved C-terminal domain AS86_4335 PF01043 SecA preprotein cross-linking domain AS86_4336 PF00472 RF-1 domain AS86_4336 PF03462 PCRF domain AS86_4337 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS86_4338 PF00005 ABC transporter AS86_4339 PF02687 FtsX-like permease family AS86_4339 PF18075 FtsX extracellular domain AS86_434 PF02557 D-alanyl-D-alanine carboxypeptidase AS86_4340 PF01471 Putative peptidoglycan binding domain AS86_4340 PF17820 PDZ domain AS86_4340 PF03572 Peptidase family S41 AS86_4341 PF17820 PDZ domain AS86_4342 PF00005 ABC transporter AS86_4342 PF00664 ABC transporter transmembrane region AS86_4343 PF01906 Putative heavy-metal-binding AS86_4344 PF16326 ABC transporter C-terminal domain AS86_4344 PF00005 ABC transporter AS86_4344 PF12848 ABC transporter AS86_4345 PF03358 NADPH-dependent FMN reductase AS86_4346 PF00376 MerR family regulatory protein AS86_4346 PF09278 MerR, DNA binding AS86_4347 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_4347 PF03466 LysR substrate binding domain AS86_4348 PF03601 Conserved hypothetical protein 698 AS86_435 PF01520 N-acetylmuramoyl-L-alanine amidase AS86_435 PF00395 S-layer homology domain AS86_4351 PF07739 TipAS antibiotic-recognition domain AS86_4351 PF13411 MerR HTH family regulatory protein AS86_4354 PF17757 UvrB interaction domain AS86_4354 PF02151 UvrB/uvrC motif AS86_4354 PF00271 Helicase conserved C-terminal domain AS86_4354 PF12344 Ultra-violet resistance protein B AS86_4354 PF04851 Type III restriction enzyme, res subunit AS86_4355 PF00005 ABC transporter AS86_4355 PF17755 UvrA DNA-binding domain AS86_4355 PF17760 UvrA interaction domain AS86_4357 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AS86_4358 PF07475 HPr Serine kinase C-terminal domain AS86_4358 PF02603 HPr Serine kinase N terminus AS86_4359 PF01790 Prolipoprotein diacylglyceryl transferase AS86_436 PF07968 Leukocidin/Hemolysin toxin family AS86_4360 PF13419 Haloacid dehalogenase-like hydrolase AS86_4361 PF14602 Hexapeptide repeat of succinyl-transferase AS86_4363 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_4365 PF00293 NUDIX domain AS86_4366 PF03668 P-loop ATPase protein family AS86_4367 PF01933 Uncharacterised protein family UPF0052 AS86_4368 PF10298 WhiA N-terminal LAGLIDADG-like domain AS86_4368 PF02650 WhiA C-terminal HTH domain AS86_4368 PF14527 WhiA LAGLIDADG-like domain AS86_4369 PF00381 PTS HPr component phosphorylation site AS86_4370 PF00574 Clp protease AS86_4371 PF04239 Protein of unknown function (DUF421) AS86_4373 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AS86_4374 PF07451 Stage V sporulation protein AD (SpoVAD) AS86_4375 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AS86_4379 PF04963 Sigma-54 factor, core binding domain AS86_4379 PF00309 Sigma-54 factor, Activator interacting domain (AID) AS86_4379 PF04552 Sigma-54, DNA binding domain AS86_4381 PF04198 Putative sugar-binding domain AS86_4382 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS86_4382 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS86_4383 PF00162 Phosphoglycerate kinase AS86_4384 PF00121 Triosephosphate isomerase AS86_4385 PF01676 Metalloenzyme superfamily AS86_4385 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AS86_4386 PF00113 Enolase, C-terminal TIM barrel domain AS86_4386 PF03952 Enolase, N-terminal domain AS86_4387 PF01156 Inosine-uridine preferring nucleoside hydrolase AS86_4388 PF03788 LrgA family AS86_4389 PF04172 LrgB-like family AS86_4390 PF03840 Preprotein translocase SecG subunit AS86_4391 PF12146 Serine aminopeptidase, S33 AS86_4392 PF17876 Cold shock domain AS86_4392 PF00575 S1 RNA binding domain AS86_4392 PF00773 RNB domain AS86_4392 PF08206 Ribonuclease B OB domain AS86_4393 PF01668 SmpB protein AS86_4394 PF00072 Response regulator receiver domain AS86_4394 PF00486 Transcriptional regulatory protein, C terminal AS86_4396 PF01032 FecCD transport family AS86_4397 PF01032 FecCD transport family AS86_4398 PF00005 ABC transporter AS86_4399 PF01289 Thiol-activated cytolysin AS86_4399 PF17440 Thiol-activated cytolysin beta sandwich domain AS86_44 PF00675 Insulinase (Peptidase family M16) AS86_44 PF05193 Peptidase M16 inactive domain AS86_4400 PF00860 Permease family AS86_4401 PF02560 Cyanate lyase C-terminal domain AS86_4402 PF00484 Carbonic anhydrase AS86_4403 PF01037 Lrp/AsnC ligand binding domain AS86_4405 PF01037 Lrp/AsnC ligand binding domain AS86_4406 PF00857 Isochorismatase family AS86_4408 PF06146 Phosphate-starvation-inducible E AS86_4410 PF13302 Acetyltransferase (GNAT) domain AS86_4411 PF00005 ABC transporter AS86_4411 PF12848 ABC transporter AS86_4412 PF07690 Major Facilitator Superfamily AS86_4415 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AS86_4416 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AS86_4418 PF00672 HAMP domain AS86_4418 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_4418 PF17202 Single cache domain 3 AS86_4420 PF01565 FAD binding domain AS86_4420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AS86_4421 PF01479 S4 domain AS86_4421 PF00579 tRNA synthetases class I (W and Y) AS86_4422 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_4423 PF07849 Protein of unknown function (DUF1641) AS86_4424 PF01638 HxlR-like helix-turn-helix AS86_4425 PF07690 Major Facilitator Superfamily AS86_4426 PF00248 Aldo/keto reductase family AS86_4429 PF13460 NAD(P)H-binding AS86_443 PF01381 Helix-turn-helix AS86_4430 PF01235 Sodium:alanine symporter family AS86_4431 PF01235 Sodium:alanine symporter family AS86_4432 PF01773 Na+ dependent nucleoside transporter N-terminus AS86_4432 PF07662 Na+ dependent nucleoside transporter C-terminus AS86_4433 PF01773 Na+ dependent nucleoside transporter N-terminus AS86_4433 PF07662 Na+ dependent nucleoside transporter C-terminus AS86_4434 PF07786 Protein of unknown function (DUF1624) AS86_4434 PF04235 Protein of unknown function (DUF418) AS86_4435 PF00210 Ferritin-like domain AS86_4437 PF03641 Possible lysine decarboxylase AS86_4440 PF00210 Ferritin-like domain AS86_4441 PF01235 Sodium:alanine symporter family AS86_4442 PF02080 TrkA-C domain AS86_4443 PF00999 Sodium/hydrogen exchanger family AS86_4444 PF09335 SNARE associated Golgi protein AS86_4446 PF01047 MarR family AS86_4447 PF02678 Pirin AS86_4447 PF17954 Quercetinase C-terminal cupin domain AS86_4448 PF01447 Thermolysin metallopeptidase, catalytic domain AS86_4448 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS86_4448 PF03413 Peptidase propeptide and YPEB domain AS86_4448 PF07504 Fungalysin/Thermolysin Propeptide Motif AS86_4449 PF13276 HTH-like domain AS86_4449 PF00665 Integrase core domain AS86_4449 PF13333 Integrase core domain AS86_4451 PF01883 Iron-sulfur cluster assembly protein AS86_4452 PF02743 Cache domain AS86_4452 PF00672 HAMP domain AS86_4452 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_4453 PF00672 HAMP domain AS86_4453 PF02743 Cache domain AS86_4453 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_4455 PF09334 tRNA synthetases class I (M) AS86_4455 PF08264 Anticodon-binding domain of tRNA AS86_4458 PF00989 PAS fold AS86_4458 PF00512 His Kinase A (phospho-acceptor) domain AS86_4458 PF16736 Single Cache-like AS86_4458 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4459 PF00072 Response regulator receiver domain AS86_4459 PF00486 Transcriptional regulatory protein, C terminal AS86_4460 PF17969 L,D-transpeptidase C-terminal domain AS86_4460 PF03734 L,D-transpeptidase catalytic domain AS86_4462 PF09335 SNARE associated Golgi protein AS86_4469 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_4469 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_4471 PF02096 60Kd inner membrane protein AS86_4474 PF13520 Amino acid permease AS86_4475 PF07690 Major Facilitator Superfamily AS86_4478 PF02743 Cache domain AS86_4478 PF00672 HAMP domain AS86_4478 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_4479 PF01910 Thiamine-binding protein AS86_4480 PF10835 Protein of unknown function (DUF2573) AS86_4481 PF01619 Proline dehydrogenase AS86_4482 PF07943 Penicillin-binding protein 5, C-terminal domain AS86_4482 PF00768 D-alanyl-D-alanine carboxypeptidase AS86_4483 PF14115 YuzL-like protein AS86_4484 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS86_4484 PF00378 Enoyl-CoA hydratase/isomerase AS86_4484 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS86_4485 PF00108 Thiolase, N-terminal domain AS86_4485 PF02803 Thiolase, C-terminal domain AS86_4486 PF02770 Acyl-CoA dehydrogenase, middle domain AS86_4486 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS86_4486 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS86_4487 PF00753 Metallo-beta-lactamase superfamily AS86_4490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS86_4490 PF00056 lactate/malate dehydrogenase, NAD binding domain AS86_4494 PF03960 ArsC family AS86_4495 PF01597 Glycine cleavage H-protein AS86_4496 PF01751 Toprim domain AS86_4497 PF00085 Thioredoxin AS86_4499 PF00005 ABC transporter AS86_4499 PF09383 NIL domain AS86_45 PF05239 PRC-barrel domain AS86_4500 PF00528 Binding-protein-dependent transport system inner membrane component AS86_4501 PF03180 NLPA lipoprotein AS86_4502 PF03180 NLPA lipoprotein AS86_4503 PF00005 ABC transporter AS86_4504 PF01458 Uncharacterized protein family (UPF0051) AS86_4505 PF00266 Aminotransferase class-V AS86_4506 PF01592 NifU-like N terminal domain AS86_4507 PF01458 Uncharacterized protein family (UPF0051) AS86_4508 PF02872 5'-nucleotidase, C-terminal domain AS86_4509 PF08827 Domain of unknown function (DUF1805) AS86_4510 PF09560 Sporulation protein YunB (Spo_YunB) AS86_4511 PF01551 Peptidase family M23 AS86_4512 PF04055 Radical SAM superfamily AS86_4512 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AS86_4516 PF10086 YhfC intramembrane metalloprotease AS86_4517 PF07739 TipAS antibiotic-recognition domain AS86_4517 PF13411 MerR HTH family regulatory protein AS86_4518 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AS86_4519 PF06265 Protein of unknown function (DUF1027) AS86_4522 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AS86_4523 PF01934 Protein of unknown function DUF86 AS86_4525 PF13344 Haloacid dehalogenase-like hydrolase AS86_4526 PF02525 Flavodoxin-like fold AS86_4528 PF15608 PELOTA RNA binding domain AS86_4528 PF11202 Phosphoribosyl transferase (PRTase) AS86_4532 PF04608 Phosphatidylglycerophosphatase A AS86_4535 PF01106 NifU-like domain AS86_4536 PF07315 Protein of unknown function (DUF1462) AS86_4544 PF08274 PhnA Zinc-Ribbon AS86_4544 PF03831 PhnA domain AS86_4545 PF03649 Uncharacterised protein family (UPF0014) AS86_4546 PF00005 ABC transporter AS86_4546 PF03412 Peptidase C39 family AS86_4546 PF00664 ABC transporter transmembrane region AS86_4547 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_4548 PF07293 Protein of unknown function (DUF1450) AS86_4549 PF01678 Diaminopimelate epimerase AS86_4550 PF01521 Iron-sulphur cluster biosynthesis AS86_4556 PF04463 Protein of unknown function (DUF523) AS86_4559 PF06445 GyrI-like small molecule binding domain AS86_4560 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_4561 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_4562 PF13344 Haloacid dehalogenase-like hydrolase AS86_4562 PF00293 NUDIX domain AS86_4564 PF06725 3D domain AS86_4565 PF00883 Cytosol aminopeptidase family, catalytic domain AS86_4565 PF02789 Cytosol aminopeptidase family, N-terminal domain AS86_4566 PF10372 Bacterial membrane-spanning protein N-terminus AS86_4566 PF02457 DisA bacterial checkpoint controller nucleotide-binding AS86_4567 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS86_4567 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS86_4567 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS86_4567 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS86_4568 PF00483 Nucleotidyl transferase AS86_4569 PF02632 BioY family AS86_4571 PF03061 Thioesterase superfamily AS86_4572 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS86_4572 PF03129 Anticodon binding domain AS86_4575 PF03600 Citrate transporter AS86_4576 PF00929 Exonuclease AS86_4577 PF08810 Kinase associated protein B AS86_4580 PF00155 Aminotransferase class I and II AS86_4582 PF00561 alpha/beta hydrolase fold AS86_4582 PF08386 TAP-like protein AS86_4583 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS86_4583 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS86_4584 PF01037 Lrp/AsnC ligand binding domain AS86_4585 PF00155 Aminotransferase class I and II AS86_4586 PF00575 S1 RNA binding domain AS86_4587 PF04070 Domain of unknown function (DUF378) AS86_4588 PF00342 Phosphoglucose isomerase AS86_4589 PF02254 TrkA-N domain AS86_4589 PF07885 Ion channel AS86_4590 PF08868 YugN-like family AS86_4591 PF02308 MgtC family AS86_46 PF16924 Dipicolinate synthase subunit A N-terminal domain AS86_46 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS86_4621 PF00440 Bacterial regulatory proteins, tetR family AS86_4622 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS86_4622 PF00056 lactate/malate dehydrogenase, NAD binding domain AS86_4624 PF02806 Alpha amylase, C-terminal all-beta domain AS86_4624 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS86_4624 PF00128 Alpha amylase, catalytic domain AS86_4626 PF00483 Nucleotidyl transferase AS86_4627 PF08323 Starch synthase catalytic domain AS86_4627 PF00534 Glycosyl transferases group 1 AS86_4628 PF00343 Carbohydrate phosphorylase AS86_4631 PF00376 MerR family regulatory protein AS86_4631 PF09278 MerR, DNA binding AS86_4634 PF00313 'Cold-shock' DNA-binding domain AS86_4635 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS86_4636 PF01040 UbiA prenyltransferase family AS86_4637 PF00425 chorismate binding enzyme AS86_4638 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS86_4638 PF16582 Middle domain of thiamine pyrophosphate AS86_4638 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS86_4639 PF12697 Alpha/beta hydrolase family AS86_4640 PF00378 Enoyl-CoA hydratase/isomerase AS86_4641 PF00501 AMP-binding enzyme AS86_4641 PF13193 AMP-binding enzyme C-terminal domain AS86_4642 PF13378 Enolase C-terminal domain-like AS86_4642 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AS86_4643 PF00486 Transcriptional regulatory protein, C terminal AS86_4643 PF00072 Response regulator receiver domain AS86_4644 PF00512 His Kinase A (phospho-acceptor) domain AS86_4644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4645 PF02557 D-alanyl-D-alanine carboxypeptidase AS86_4646 PF01979 Amidohydrolase family AS86_4647 PF03841 L-seryl-tRNA selenium transferase AS86_4648 PF07071 KDGP aldolase AS86_4651 PF02447 GntP family permease AS86_4653 PF02687 FtsX-like permease family AS86_4654 PF00005 ABC transporter AS86_4655 PF02687 FtsX-like permease family AS86_4656 PF02687 FtsX-like permease family AS86_4657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4658 PF00072 Response regulator receiver domain AS86_4658 PF00486 Transcriptional regulatory protein, C terminal AS86_4660 PF01022 Bacterial regulatory protein, arsR family AS86_4661 PF13630 SdpI/YhfL protein family AS86_4661 PF07853 Protein of unknown function (DUF1648) AS86_4662 PF00005 ABC transporter AS86_4664 PF12833 Helix-turn-helix domain AS86_4664 PF06445 GyrI-like small molecule binding domain AS86_4665 PF00005 ABC transporter AS86_4666 PF02687 FtsX-like permease family AS86_4667 PF00398 Ribosomal RNA adenine dimethylase AS86_4668 PF09335 SNARE associated Golgi protein AS86_4669 PF00486 Transcriptional regulatory protein, C terminal AS86_4669 PF00072 Response regulator receiver domain AS86_467 PF00589 Phage integrase family AS86_4670 PF00989 PAS fold AS86_4670 PF00512 His Kinase A (phospho-acceptor) domain AS86_4670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4670 PF16736 Single Cache-like AS86_4681 PF00781 Diacylglycerol kinase catalytic domain AS86_4687 PF00486 Transcriptional regulatory protein, C terminal AS86_4687 PF00072 Response regulator receiver domain AS86_4688 PF00512 His Kinase A (phospho-acceptor) domain AS86_4688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4688 PF00672 HAMP domain AS86_4689 PF09515 Thiamine transporter protein (Thia_YuaJ) AS86_4691 PF07664 Ferrous iron transport protein B C terminus AS86_4691 PF17910 FeoB cytosolic helical domain AS86_4691 PF02421 Ferrous iron transport protein B AS86_4691 PF07670 Nucleoside recognition AS86_4694 PF04012 PspA/IM30 family AS86_4699 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_4699 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_47 PF02441 Flavoprotein AS86_4702 PF10676 Spore germination protein gerPA/gerPF AS86_4703 PF02322 Cytochrome bd terminal oxidase subunit II AS86_4704 PF01654 Cytochrome bd terminal oxidase subunit I AS86_4705 PF01809 Putative membrane protein insertion efficiency factor AS86_4706 PF00484 Carbonic anhydrase AS86_4707 PF02664 S-Ribosylhomocysteinase (LuxS) AS86_4708 PF00376 MerR family regulatory protein AS86_4708 PF09278 MerR, DNA binding AS86_4709 PF00893 Small Multidrug Resistance protein AS86_4710 PF00893 Small Multidrug Resistance protein AS86_4716 PF00293 NUDIX domain AS86_4721 PF00528 Binding-protein-dependent transport system inner membrane component AS86_4722 PF00005 ABC transporter AS86_4726 PF09962 Uncharacterized conserved protein (DUF2196) AS86_4728 PF00884 Sulfatase AS86_4729 PF08386 TAP-like protein AS86_4729 PF00561 alpha/beta hydrolase fold AS86_4731 PF00512 His Kinase A (phospho-acceptor) domain AS86_4731 PF02743 Cache domain AS86_4731 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4732 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4732 PF13426 PAS domain AS86_4732 PF00989 PAS fold AS86_4732 PF13188 PAS domain AS86_4732 PF00512 His Kinase A (phospho-acceptor) domain AS86_4744 PF01293 Phosphoenolpyruvate carboxykinase AS86_4745 PF00438 S-adenosylmethionine synthetase, N-terminal domain AS86_4745 PF02773 S-adenosylmethionine synthetase, C-terminal domain AS86_4745 PF02772 S-adenosylmethionine synthetase, central domain AS86_4748 PF00994 Probable molybdopterin binding domain AS86_4749 PF12804 MobA-like NTP transferase domain AS86_4750 PF13439 Glycosyltransferase Family 4 AS86_4750 PF00534 Glycosyl transferases group 1 AS86_4751 PF01569 PAP2 superfamily AS86_4752 PF00132 Bacterial transferase hexapeptide (six repeats) AS86_4753 PF12146 Serine aminopeptidase, S33 AS86_4754 PF10776 Protein of unknown function (DUF2600) AS86_4756 PF01177 Asp/Glu/Hydantoin racemase AS86_4757 PF06962 Putative rRNA methylase AS86_4758 PF16199 Radical_SAM C-terminal domain AS86_4758 PF04055 Radical SAM superfamily AS86_476 PF03354 Phage Terminase AS86_4761 PF07786 Protein of unknown function (DUF1624) AS86_4761 PF04235 Protein of unknown function (DUF418) AS86_4762 PF00005 ABC transporter AS86_4764 PF00589 Phage integrase family AS86_4765 PF02080 TrkA-C domain AS86_4766 PF00999 Sodium/hydrogen exchanger family AS86_4767 PF07690 Major Facilitator Superfamily AS86_4768 PF09334 tRNA synthetases class I (M) AS86_4768 PF00133 tRNA synthetases class I (I, L, M and V) AS86_4768 PF13603 Leucyl-tRNA synthetase, Domain 2 AS86_4768 PF08264 Anticodon-binding domain of tRNA AS86_4772 PF05504 Spore germination B3/ GerAC like, C-terminal AS86_4774 PF03323 Bacillus/Clostridium GerA spore germination protein AS86_4775 PF00561 alpha/beta hydrolase fold AS86_4777 PF00581 Rhodanese-like domain AS86_478 PF00574 Clp protease AS86_4781 PF06463 Molybdenum Cofactor Synthesis C AS86_4781 PF04055 Radical SAM superfamily AS86_4782 PF00899 ThiF family AS86_4783 PF01967 MoaC family AS86_4784 PF03453 MoeA N-terminal region (domain I and II) AS86_4784 PF03454 MoeA C-terminal region (domain IV) AS86_4784 PF00994 Probable molybdopterin binding domain AS86_4785 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AS86_4786 PF02391 MoaE protein AS86_4789 PF06800 Sugar transport protein AS86_4791 PF02559 CarD-like/TRCF domain AS86_4793 PF10957 Sporulation protein Cse60 AS86_4795 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AS86_4796 PF01022 Bacterial regulatory protein, arsR family AS86_4797 PF07690 Major Facilitator Superfamily AS86_4799 PF01943 Polysaccharide biosynthesis protein AS86_4799 PF14667 Polysaccharide biosynthesis C-terminal domain AS86_4800 PF00849 RNA pseudouridylate synthase AS86_4800 PF01479 S4 domain AS86_4801 PF08220 DeoR-like helix-turn-helix domain AS86_4802 PF01546 Peptidase family M20/M25/M40 AS86_4803 PF02834 LigT like Phosphoesterase AS86_4804 PF17999 Pullulanase N1-terminal domain AS86_4804 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AS86_4804 PF00128 Alpha amylase, catalytic domain AS86_4805 PF01636 Phosphotransferase enzyme family AS86_4806 PF14165 YtzH-like protein AS86_4807 PF02390 Putative methyltransferase AS86_4808 PF00753 Metallo-beta-lactamase superfamily AS86_4810 PF05343 M42 glutamyl aminopeptidase AS86_4811 PF01931 Protein of unknown function DUF84 AS86_4812 PF00085 Thioredoxin AS86_4813 PF07285 Protein of unknown function (DUF1444) AS86_4814 PF01588 Putative tRNA binding domain AS86_4814 PF14794 Domain of unknown function (DUF4479) AS86_4816 PF01520 N-acetylmuramoyl-L-alanine amidase AS86_4816 PF08239 Bacterial SH3 domain AS86_4817 PF09397 Ftsk gamma domain AS86_4817 PF17854 FtsK alpha domain AS86_4817 PF01580 FtsK/SpoIIIE family AS86_4819 PF02875 Mur ligase family, glutamate ligase domain AS86_4819 PF01225 Mur ligase family, catalytic domain AS86_4819 PF08245 Mur ligase middle domain AS86_4820 PF13411 MerR HTH family regulatory protein AS86_4821 PF00892 EamA-like transporter family AS86_4822 PF13302 Acetyltransferase (GNAT) domain AS86_4825 PF02073 Thermophilic metalloprotease (M29) AS86_4827 PF11009 Protein of unknown function (DUF2847) AS86_4828 PF07537 CamS sex pheromone cAM373 precursor AS86_4829 PF00356 Bacterial regulatory proteins, lacI family AS86_4833 PF01741 Large-conductance mechanosensitive channel, MscL AS86_4834 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS86_4835 PF12796 Ankyrin repeats (3 copies) AS86_4836 PF16736 Single Cache-like AS86_4836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4836 PF00512 His Kinase A (phospho-acceptor) domain AS86_4836 PF00989 PAS fold AS86_4837 PF00072 Response regulator receiver domain AS86_4837 PF00486 Transcriptional regulatory protein, C terminal AS86_4840 PF00850 Histone deacetylase domain AS86_4841 PF00571 CBS domain AS86_4842 PF00583 Acetyltransferase (GNAT) family AS86_4843 PF00501 AMP-binding enzyme AS86_4843 PF13193 AMP-binding enzyme C-terminal domain AS86_4844 PF14602 Hexapeptide repeat of succinyl-transferase AS86_4844 PF12464 Maltose acetyltransferase AS86_4845 PF01479 S4 domain AS86_4845 PF00579 tRNA synthetases class I (W and Y) AS86_4848 PF00163 Ribosomal protein S4/S9 N-terminal domain AS86_4848 PF01479 S4 domain AS86_4849 PF01053 Cys/Met metabolism PLP-dependent enzyme AS86_4850 PF13185 GAF domain AS86_4851 PF00440 Bacterial regulatory proteins, tetR family AS86_4852 PF00892 EamA-like transporter family AS86_4853 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_4853 PF03466 LysR substrate binding domain AS86_4854 PF06160 Septation ring formation regulator, EzrA AS86_4855 PF00266 Aminotransferase class-V AS86_4856 PF02926 THUMP domain AS86_4856 PF02568 Thiamine biosynthesis protein (ThiI) AS86_4857 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS86_4858 PF00501 AMP-binding enzyme AS86_4858 PF13193 AMP-binding enzyme C-terminal domain AS86_4860 PF07969 Amidohydrolase family AS86_4861 PF01513 ATP-NAD kinase AS86_4863 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AS86_4864 PF08534 Redoxin AS86_4865 PF02384 N-6 DNA Methylase AS86_4866 PF00871 Acetokinase family AS86_4869 PF12787 EcsC protein family AS86_4870 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_4870 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_4874 PF00764 Arginosuccinate synthase AS86_4875 PF14698 Argininosuccinate lyase C-terminal AS86_4875 PF00206 Lyase AS86_4879 PF00582 Universal stress protein family AS86_4881 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS86_4881 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS86_4883 PF07883 Cupin domain AS86_4884 PF12746 GNAT acetyltransferase AS86_489 PF10779 Haemolysin XhlA AS86_4890 PF00557 Metallopeptidase family M24 AS86_4890 PF01321 Creatinase/Prolidase N-terminal domain AS86_4893 PF07085 DRTGG domain AS86_4893 PF00571 CBS domain AS86_4893 PF03061 Thioesterase superfamily AS86_4893 PF00392 Bacterial regulatory proteins, gntR family AS86_4895 PF14007 YtpI-like protein AS86_4896 PF02272 DHHA1 domain AS86_4896 PF01368 DHH family AS86_4898 PF14034 Sporulation protein YtrH AS86_4899 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS86_4899 PF14579 Helix-hairpin-helix motif AS86_4899 PF01336 OB-fold nucleic acid binding domain AS86_4899 PF02811 PHP domain AS86_4899 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS86_490 PF05105 Bacteriophage holin family AS86_4900 PF03949 Malic enzyme, NAD binding domain AS86_4900 PF00390 Malic enzyme, N-terminal domain AS86_4901 PF00392 Bacterial regulatory proteins, gntR family AS86_4902 PF17848 Acetyl-coA carboxylase zinc finger domain AS86_4902 PF01039 Carboxyl transferase domain AS86_4903 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AS86_4904 PF00365 Phosphofructokinase AS86_4905 PF00391 PEP-utilising enzyme, mobile domain AS86_4905 PF00224 Pyruvate kinase, barrel domain AS86_4905 PF02887 Pyruvate kinase, alpha/beta domain AS86_4906 PF04186 FxsA cytoplasmic membrane protein AS86_4907 PF01594 AI-2E family transporter AS86_4908 PF04284 Protein of unknown function (DUF441) AS86_4909 PF00285 Citrate synthase, C-terminal domain AS86_491 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_491 PF12123 N-acetylmuramoyl-l-alanine amidase AS86_4910 PF00180 Isocitrate/isopropylmalate dehydrogenase AS86_4911 PF00056 lactate/malate dehydrogenase, NAD binding domain AS86_4911 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS86_4915 PF00072 Response regulator receiver domain AS86_4915 PF00486 Transcriptional regulatory protein, C terminal AS86_4916 PF00512 His Kinase A (phospho-acceptor) domain AS86_4916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4916 PF16736 Single Cache-like AS86_4916 PF00989 PAS fold AS86_4917 PF00476 DNA polymerase family A AS86_4917 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS86_4917 PF01367 5'-3' exonuclease, C-terminal SAM fold AS86_4918 PF06827 Zinc finger found in FPG and IleRS AS86_4918 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AS86_4918 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AS86_4919 PF02659 Putative manganese efflux pump AS86_4920 PF01121 Dephospho-CoA kinase AS86_4921 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS86_4921 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS86_4922 PF02675 S-adenosylmethionine decarboxylase AS86_4923 PF03477 ATP cone domain AS86_4924 PF07261 Replication initiation and membrane attachment AS86_4925 PF07319 Primosomal protein DnaI N-terminus AS86_4925 PF01695 IstB-like ATP binding protein AS86_4927 PF08812 YtxC-like family AS86_4928 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS86_4928 PF02824 TGS domain AS86_4928 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS86_4928 PF03129 Anticodon binding domain AS86_4929 PF00707 Translation initiation factor IF-3, C-terminal domain AS86_4929 PF05198 Translation initiation factor IF-3, N-terminal domain AS86_4930 PF01632 Ribosomal protein L35 AS86_4931 PF00453 Ribosomal protein L20 AS86_4933 PF05343 M42 glutamyl aminopeptidase AS86_4934 PF16859 Tetracyclin repressor-like, C-terminal domain AS86_4934 PF00440 Bacterial regulatory proteins, tetR family AS86_4936 PF07690 Major Facilitator Superfamily AS86_4939 PF01966 HD domain AS86_4940 PF14098 Small, acid-soluble spore protein I AS86_4941 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS86_4941 PF00588 SpoU rRNA Methylase family AS86_4942 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AS86_4942 PF01409 tRNA synthetases class II core domain (F) AS86_4943 PF03483 B3/4 domain AS86_4943 PF03484 tRNA synthetase B5 domain AS86_4943 PF03147 Ferredoxin-fold anticodon binding domain AS86_4943 PF01588 Putative tRNA binding domain AS86_4943 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AS86_4944 PF00152 tRNA synthetases class II (D, K and N) AS86_4944 PF01336 OB-fold nucleic acid binding domain AS86_4946 PF01351 Ribonuclease HII AS86_4946 PF11858 Domain of unknown function (DUF3378) AS86_4947 PF05164 Cell division protein ZapA AS86_4948 PF02674 Colicin V production protein AS86_4949 PF14791 DNA polymerase beta thumb AS86_4949 PF02811 PHP domain AS86_4949 PF14716 Helix-hairpin-helix domain AS86_4950 PF00488 MutS domain V AS86_4950 PF01713 Smr domain AS86_4952 PF00849 RNA pseudouridylate synthase AS86_4952 PF01479 S4 domain AS86_4953 PF05525 Branched-chain amino acid transport protein AS86_4954 PF05031 Iron Transport-associated domain AS86_4956 PF05031 Iron Transport-associated domain AS86_4957 PF01497 Periplasmic binding protein AS86_4958 PF01032 FecCD transport family AS86_4959 PF00005 ABC transporter AS86_4960 PF04203 Sortase domain AS86_4961 PF03992 Antibiotic biosynthesis monooxygenase AS86_4962 PF10672 S-adenosylmethionine-dependent methyltransferase AS86_4962 PF17785 PUA-like domain AS86_4963 PF09962 Uncharacterized conserved protein (DUF2196) AS86_4965 PF00486 Transcriptional regulatory protein, C terminal AS86_4965 PF00072 Response regulator receiver domain AS86_4966 PF00512 His Kinase A (phospho-acceptor) domain AS86_4966 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_4967 PF00005 ABC transporter AS86_4971 PF05163 DinB family AS86_4973 PF01032 FecCD transport family AS86_4974 PF01497 Periplasmic binding protein AS86_4976 PF13193 AMP-binding enzyme C-terminal domain AS86_4976 PF00501 AMP-binding enzyme AS86_4977 PF00440 Bacterial regulatory proteins, tetR family AS86_4977 PF08359 YsiA-like protein, C-terminal region AS86_4978 PF00378 Enoyl-CoA hydratase/isomerase AS86_4979 PF01012 Electron transfer flavoprotein domain AS86_4980 PF01012 Electron transfer flavoprotein domain AS86_4980 PF00766 Electron transfer flavoprotein FAD-binding domain AS86_4981 PF00085 Thioredoxin AS86_4982 PF02151 UvrB/uvrC motif AS86_4982 PF01541 GIY-YIG catalytic domain AS86_4982 PF08459 UvrC Helix-hairpin-helix N-terminal AS86_4983 PF10702 Protein of unknown function (DUF2507) AS86_4984 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AS86_4985 PF00890 FAD binding domain AS86_4985 PF02910 Fumarate reductase flavoprotein C-term AS86_4986 PF13085 2Fe-2S iron-sulfur cluster binding domain AS86_4986 PF13183 4Fe-4S dicluster domain AS86_4987 PF03061 Thioesterase superfamily AS86_4988 PF02557 D-alanyl-D-alanine carboxypeptidase AS86_4989 PF01618 MotA/TolQ/ExbB proton channel family AS86_4990 PF00691 OmpA family AS86_4990 PF13677 Membrane MotB of proton-channel complex MotA/MotB AS86_4991 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AS86_4992 PF13732 Domain of unknown function (DUF4162) AS86_4992 PF00005 ABC transporter AS86_4994 PF02082 Transcriptional regulator AS86_4995 PF00230 Major intrinsic protein AS86_4996 PF13536 Putative multidrug resistance efflux transporter AS86_4997 PF07883 Cupin domain AS86_4997 PF01381 Helix-turn-helix AS86_4998 PF04024 PspC domain AS86_4999 PF07969 Amidohydrolase family AS86_5 PF00886 Ribosomal protein S16 AS86_5000 PF00860 Permease family AS86_5001 PF00196 Bacterial regulatory proteins, luxR family AS86_5003 PF00440 Bacterial regulatory proteins, tetR family AS86_5005 PF07690 Major Facilitator Superfamily AS86_5006 PF01177 Asp/Glu/Hydantoin racemase AS86_5007 PF10646 Sporulation and spore germination AS86_5008 PF03725 3' exoribonuclease family, domain 2 AS86_5008 PF01138 3' exoribonuclease family, domain 1 AS86_5009 PF01725 Ham1 family AS86_5010 PF12850 Calcineurin-like phosphoesterase superfamily domain AS86_5014 PF13276 HTH-like domain AS86_5014 PF00665 Integrase core domain AS86_5014 PF13333 Integrase core domain AS86_5016 PF08000 Bacterial PH domain AS86_5016 PF11724 YvbH-like oligomerisation region AS86_5020 PF05698 Bacterial trigger factor protein (TF) C-terminus AS86_5020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS86_5020 PF05697 Bacterial trigger factor protein (TF) AS86_5021 PF07724 AAA domain (Cdc48 subfamily) AS86_5021 PF10431 C-terminal, D2-small domain, of ClpB protein AS86_5021 PF06689 ClpX C4-type zinc finger AS86_5022 PF00004 ATPase family associated with various cellular activities (AAA) AS86_5022 PF05362 Lon protease (S16) C-terminal proteolytic domain AS86_5023 PF00004 ATPase family associated with various cellular activities (AAA) AS86_5023 PF05362 Lon protease (S16) C-terminal proteolytic domain AS86_5023 PF02190 ATP-dependent protease La (LON) substrate-binding domain AS86_5024 PF01926 50S ribosome-binding GTPase AS86_5025 PF02566 OsmC-like protein AS86_5026 PF01047 MarR family AS86_5027 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AS86_5027 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AS86_5027 PF01488 Shikimate / quinate 5-dehydrogenase AS86_5028 PF01578 Cytochrome C assembly protein AS86_5029 PF03900 Porphobilinogen deaminase, C-terminal domain AS86_5029 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AS86_503 PF00440 Bacterial regulatory proteins, tetR family AS86_5030 PF02602 Uroporphyrinogen-III synthase HemD AS86_5031 PF00490 Delta-aminolevulinic acid dehydratase AS86_5032 PF00202 Aminotransferase class-III AS86_5033 PF01476 LysM domain AS86_5035 PF10458 Valyl tRNA synthetase tRNA binding arm AS86_5035 PF08264 Anticodon-binding domain of tRNA AS86_5035 PF00133 tRNA synthetases class I (I, L, M and V) AS86_5036 PF02875 Mur ligase family, glutamate ligase domain AS86_5036 PF08245 Mur ligase middle domain AS86_5038 PF02545 Maf-like protein AS86_5039 PF04002 RadC-like JAB domain AS86_5041 PF04085 rod shape-determining protein MreC AS86_5043 PF03775 Septum formation inhibitor MinC, C-terminal domain AS86_5044 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AS86_5045 PF01551 Peptidase family M23 AS86_5046 PF02163 Peptidase family M50 AS86_5047 PF00575 S1 RNA binding domain AS86_5047 PF10150 Ribonuclease E/G family AS86_5048 PF00829 Ribosomal prokaryotic L21 protein AS86_5049 PF04327 Cysteine protease Prp AS86_505 PF00563 EAL domain AS86_505 PF00990 Diguanylate cyclase, GGDEF domain AS86_505 PF03707 Bacterial signalling protein N terminal repeat AS86_5050 PF01016 Ribosomal L27 protein AS86_5051 PF14682 Sporulation initiation phospho-transferase B, C-terminal AS86_5051 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS86_5052 PF01018 GTP1/OBG AS86_5052 PF09269 Domain of unknown function (DUF1967) AS86_5052 PF01926 50S ribosome-binding GTPase AS86_5053 PF00486 Transcriptional regulatory protein, C terminal AS86_5053 PF00072 Response regulator receiver domain AS86_5054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_5055 PF00005 ABC transporter AS86_5056 PF02687 FtsX-like permease family AS86_5057 PF02687 FtsX-like permease family AS86_5058 PF01842 ACT domain AS86_5058 PF00800 Prephenate dehydratase AS86_5060 PF03475 3-alpha domain AS86_5060 PF03473 MOSC domain AS86_5061 PF02829 3H domain AS86_5061 PF08279 HTH domain AS86_5062 PF00266 Aminotransferase class-V AS86_5063 PF02910 Fumarate reductase flavoprotein C-term AS86_5063 PF00890 FAD binding domain AS86_5064 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AS86_5064 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AS86_5065 PF02445 Quinolinate synthetase A protein AS86_5066 PF01476 LysM domain AS86_5070 PF01497 Periplasmic binding protein AS86_5071 PF07499 RuvA, C-terminal domain AS86_5071 PF01330 RuvA N terminal domain AS86_5072 PF05496 Holliday junction DNA helicase RuvB P-loop domain AS86_5072 PF17864 RuvB AAA lid domain AS86_5072 PF05491 RuvB C-terminal winged helix domain AS86_5073 PF11146 Protein of unknown function (DUF2905) AS86_5074 PF02547 Queuosine biosynthesis protein AS86_5075 PF01702 Queuine tRNA-ribosyltransferase AS86_5076 PF02699 Preprotein translocase subunit AS86_5078 PF04239 Protein of unknown function (DUF421) AS86_5079 PF01943 Polysaccharide biosynthesis protein AS86_5079 PF14667 Polysaccharide biosynthesis C-terminal domain AS86_5081 PF02355 Protein export membrane protein AS86_5081 PF07549 SecD/SecF GG Motif AS86_5082 PF16916 Dimerisation domain of Zinc Transporter AS86_5082 PF01545 Cation efflux family AS86_5083 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AS86_5083 PF02272 DHHA1 domain AS86_5083 PF01368 DHH family AS86_5083 PF17768 RecJ OB domain AS86_5084 PF00156 Phosphoribosyl transferase domain AS86_5085 PF02824 TGS domain AS86_5085 PF04607 Region found in RelA / SpoT proteins AS86_5085 PF13291 ACT domain AS86_5086 PF02580 D-Tyr-tRNA(Tyr) deacylase AS86_5089 PF13393 Histidyl-tRNA synthetase AS86_5089 PF03129 Anticodon binding domain AS86_5090 PF00152 tRNA synthetases class II (D, K and N) AS86_5090 PF01336 OB-fold nucleic acid binding domain AS86_5090 PF02938 GAD domain AS86_5091 PF00899 ThiF family AS86_5093 PF12002 MgsA AAA+ ATPase C terminal AS86_5093 PF16193 AAA C-terminal domain AS86_5093 PF05496 Holliday junction DNA helicase RuvB P-loop domain AS86_5094 PF02082 Transcriptional regulator AS86_5095 PF00266 Aminotransferase class-V AS86_5098 PF13538 UvrD-like helicase C-terminal domain AS86_5098 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AS86_5098 PF14490 Helix-hairpin-helix containing domain AS86_51 PF01381 Helix-turn-helix AS86_5102 PF01594 AI-2E family transporter AS86_5104 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS86_5104 PF01411 tRNA synthetases class II (A) AS86_5104 PF02272 DHHA1 domain AS86_5106 PF03652 Holliday junction resolvase AS86_5107 PF06949 Protein of unknown function (DUF1292) AS86_5108 PF02618 YceG-like family AS86_5112 PF00485 Phosphoribulokinase / Uridine kinase family AS86_5113 PF01272 Transcription elongation factor, GreA/GreB, C-term AS86_5113 PF03449 Transcription elongation factor, N-terminal AS86_5115 PF00905 Penicillin binding protein transpeptidase domain AS86_5115 PF03717 Penicillin-binding Protein dimerisation domain AS86_5118 PF08241 Methyltransferase domain AS86_5119 PF01048 Phosphorylase superfamily AS86_512 PF02743 Cache domain AS86_512 PF00672 HAMP domain AS86_512 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS86_5120 PF00291 Pyridoxal-phosphate dependent enzyme AS86_5121 PF01053 Cys/Met metabolism PLP-dependent enzyme AS86_5122 PF00171 Aldehyde dehydrogenase family AS86_5122 PF00465 Iron-containing alcohol dehydrogenase AS86_5123 PF14143 YrhC-like protein AS86_5124 PF01497 Periplasmic binding protein AS86_5125 PF01032 FecCD transport family AS86_5126 PF00005 ABC transporter AS86_5132 PF07681 DoxX AS86_5133 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_5135 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AS86_5136 PF02225 PA domain AS86_5136 PF00082 Subtilase family AS86_5136 PF05922 Peptidase inhibitor I9 AS86_5136 PF13860 FlgD Ig-like domain AS86_514 PF18801 response regulator aspartate phosphatase H, N terminal AS86_5143 PF08386 TAP-like protein AS86_5143 PF00561 alpha/beta hydrolase fold AS86_5144 PF00583 Acetyltransferase (GNAT) family AS86_5145 PF00245 Alkaline phosphatase AS86_5147 PF04607 Region found in RelA / SpoT proteins AS86_5148 PF00881 Nitroreductase family AS86_5149 PF00471 Ribosomal protein L33 AS86_515 PF16363 GDP-mannose 4,6 dehydratase AS86_5150 PF16244 Domain of unknown function (DUF4901) AS86_5152 PF04542 Sigma-70 region 2 AS86_5152 PF04545 Sigma-70, region 4 AS86_5153 PF02666 Phosphatidylserine decarboxylase AS86_5156 PF01926 50S ribosome-binding GTPase AS86_5157 PF08501 Shikimate dehydrogenase substrate binding domain AS86_5157 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AS86_5157 PF01488 Shikimate / quinate 5-dehydrogenase AS86_5158 PF01985 CRS1 / YhbY (CRM) domain AS86_5159 PF01467 Cytidylyltransferase-like AS86_516 PF01370 NAD dependent epimerase/dehydratase family AS86_5160 PF01966 HD domain AS86_5162 PF13649 Methyltransferase domain AS86_5163 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS86_5163 PF03807 NADP oxidoreductase coenzyme F420-dependent AS86_5164 PF10531 SLBB domain AS86_5165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS86_5166 PF00753 Metallo-beta-lactamase superfamily AS86_5166 PF13567 Domain of unknown function (DUF4131) AS86_5166 PF03772 Competence protein AS86_5167 PF14141 YqzM-like protein AS86_5168 PF06144 DNA polymerase III, delta subunit AS86_5169 PF01649 Ribosomal protein S20 AS86_5170 PF03418 Germination protease AS86_5172 PF00009 Elongation factor Tu GTP binding domain AS86_5172 PF03144 Elongation factor Tu domain 2 AS86_5172 PF06421 GTP-binding protein LepA C-terminus AS86_5172 PF00679 Elongation factor G C-terminus AS86_5173 PF01638 HxlR-like helix-turn-helix AS86_5174 PF06969 HemN C-terminal domain AS86_5174 PF04055 Radical SAM superfamily AS86_5175 PF01628 HrcA protein C terminal domain AS86_5176 PF01025 GrpE AS86_5177 PF00012 Hsp70 protein AS86_5178 PF01556 DnaJ C terminal domain AS86_5178 PF00684 DnaJ central domain AS86_5178 PF00226 DnaJ domain AS86_518 PF00483 Nucleotidyl transferase AS86_5180 PF04452 RNA methyltransferase AS86_5181 PF04055 Radical SAM superfamily AS86_5181 PF01938 TRAM domain AS86_5181 PF00919 Uncharacterized protein family UPF0004 AS86_5182 PF01165 Ribosomal protein S21 AS86_5183 PF09424 Yqey-like protein AS86_5184 PF07873 YabP family AS86_5185 PF06898 Putative stage IV sporulation protein YqfD AS86_5186 PF02562 PhoH-like protein AS86_5187 PF01966 HD domain AS86_5187 PF07697 7TM-HD extracellular AS86_5187 PF07698 7TM receptor with intracellular HD hydrolase AS86_5188 PF02130 Uncharacterized protein family UPF0054 AS86_5189 PF01219 Prokaryotic diacylglycerol kinase AS86_5190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS86_5191 PF07650 KH domain AS86_5191 PF01926 50S ribosome-binding GTPase AS86_5193 PF02565 Recombination protein O C terminal AS86_5193 PF11967 Recombination protein O N terminal AS86_5194 PF00571 CBS domain AS86_5194 PF08279 HTH domain AS86_5195 PF03618 Kinase/pyrophosphorylase AS86_5196 PF10410 DnaB-helicase binding domain of primase AS86_5196 PF08275 DNA primase catalytic core, N-terminal domain AS86_5196 PF01807 CHC2 zinc finger AS86_5197 PF04545 Sigma-70, region 4 AS86_5197 PF04539 Sigma-70 region 3 AS86_5197 PF04542 Sigma-70 region 2 AS86_5197 PF00140 Sigma-70 factor, region 1.2 AS86_5197 PF03979 Sigma-70 factor, region 1.1 AS86_5198 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS86_5199 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AS86_5200 PF01784 NIF3 (NGG1p interacting factor 3) AS86_5201 PF02401 LytB protein AS86_5203 PF00270 DEAD/DEAH box helicase AS86_5203 PF00271 Helicase conserved C-terminal domain AS86_5204 PF01261 Xylose isomerase-like TIM barrel AS86_5205 PF11116 Protein of unknown function (DUF2624) AS86_5206 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_5206 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_5207 PF00005 ABC transporter AS86_5208 PF00950 ABC 3 transport family AS86_5209 PF01475 Ferric uptake regulator family AS86_5210 PF04551 GcpE protein AS86_5212 PF06691 Protein of unknown function (DUF1189) AS86_5214 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS86_5214 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS86_5215 PF07690 Major Facilitator Superfamily AS86_5216 PF00589 Phage integrase family AS86_522 PF03323 Bacillus/Clostridium GerA spore germination protein AS86_5221 PF01381 Helix-turn-helix AS86_5238 PF02796 Helix-turn-helix domain of resolvase AS86_5238 PF00239 Resolvase, N terminal domain AS86_524 PF18416 N-acetylglucosamine binding protein domain 2 AS86_524 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AS86_525 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AS86_5257 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_5257 PF01476 LysM domain AS86_5257 PF01471 Putative peptidoglycan binding domain AS86_5266 PF12849 PBP superfamily domain AS86_5267 PF00528 Binding-protein-dependent transport system inner membrane component AS86_5268 PF00528 Binding-protein-dependent transport system inner membrane component AS86_5269 PF00005 ABC transporter AS86_527 PF00535 Glycosyl transferase family 2 AS86_5270 PF01895 PhoU domain AS86_5271 PF00483 Nucleotidyl transferase AS86_5272 PF00471 Ribosomal protein L33 AS86_5273 PF01812 5-formyltetrahydrofolate cyclo-ligase family AS86_5274 PF06014 Bacterial protein of unknown function (DUF910) AS86_5275 PF00480 ROK family AS86_5276 PF10958 Protein of unknown function (DUF2759) AS86_5277 PF00753 Metallo-beta-lactamase superfamily AS86_5279 PF01022 Bacterial regulatory protein, arsR family AS86_528 PF00535 Glycosyl transferase family 2 AS86_5281 PF01053 Cys/Met metabolism PLP-dependent enzyme AS86_5282 PF01053 Cys/Met metabolism PLP-dependent enzyme AS86_5283 PF02219 Methylenetetrahydrofolate reductase AS86_5283 PF02574 Homocysteine S-methyltransferase AS86_5284 PF02607 B12 binding domain AS86_5284 PF02574 Homocysteine S-methyltransferase AS86_5284 PF00809 Pterin binding enzyme AS86_5284 PF02310 B12 binding domain AS86_5284 PF02965 Vitamin B12 dependent methionine synthase, activation domain AS86_5285 PF04101 Glycosyltransferase family 28 C-terminal domain AS86_5285 PF03033 Glycosyltransferase family 28 N-terminal domain AS86_529 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AS86_5292 PF00375 Sodium:dicarboxylate symporter family AS86_5293 PF11117 Protein of unknown function (DUF2626) AS86_5295 PF00437 Type II/IV secretion system protein AS86_5296 PF00482 Type II secretion system (T2SS), protein F AS86_530 PF08485 Polysaccharide biosynthesis protein C-terminal AS86_530 PF02719 Polysaccharide biosynthesis protein AS86_5304 PF14038 YqzE-like protein AS86_5308 PF11079 Bacterial protein YqhG of unknown function AS86_5309 PF00176 SNF2 family N-terminal domain AS86_5309 PF00271 Helicase conserved C-terminal domain AS86_531 PF16363 GDP-mannose 4,6 dehydratase AS86_5310 PF01571 Aminomethyltransferase folate-binding domain AS86_5310 PF08669 Glycine cleavage T-protein C-terminal barrel domain AS86_5311 PF02347 Glycine cleavage system P-protein AS86_5312 PF02347 Glycine cleavage system P-protein AS86_5317 PF00893 Small Multidrug Resistance protein AS86_5318 PF00893 Small Multidrug Resistance protein AS86_532 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS86_5320 PF00356 Bacterial regulatory proteins, lacI family AS86_5320 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS86_5322 PF00581 Rhodanese-like domain AS86_5323 PF03099 Biotin/lipoate A/B protein ligase family AS86_5328 PF01325 Iron dependent repressor, N-terminal DNA binding domain AS86_5328 PF02742 Iron dependent repressor, metal binding and dimerisation domain AS86_533 PF02348 Cytidylyltransferase AS86_5330 PF13419 Haloacid dehalogenase-like hydrolase AS86_5331 PF07136 Protein of unknown function (DUF1385) AS86_5332 PF11085 Conserved membrane protein YqhR AS86_5333 PF01220 Dehydroquinase class II AS86_5334 PF00557 Metallopeptidase family M24 AS86_5334 PF01321 Creatinase/Prolidase N-terminal domain AS86_5335 PF09285 Elongation factor P, C-terminal AS86_5335 PF01132 Elongation factor P (EF-P) OB domain AS86_5335 PF08207 Elongation factor P (EF-P) KOW-like domain AS86_5340 PF09548 Stage III sporulation protein AB (spore_III_AB) AS86_5341 PF06686 Stage III sporulation protein AC/AD protein family AS86_5342 PF06686 Stage III sporulation protein AC/AD protein family AS86_5343 PF09546 Stage III sporulation protein AE (spore_III_AE) AS86_5344 PF09581 Stage III sporulation protein AF (Spore_III_AF) AS86_5346 PF12685 SpoIIIAH-like protein AS86_5347 PF00364 Biotin-requiring enzyme AS86_5348 PF00289 Biotin carboxylase, N-terminal domain AS86_5348 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS86_5348 PF02785 Biotin carboxylase C-terminal domain AS86_5349 PF03780 Asp23 family, cell envelope-related function AS86_5350 PF01029 NusB family AS86_5351 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AS86_5351 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AS86_5352 PF02601 Exonuclease VII, large subunit AS86_5352 PF13742 OB-fold nucleic acid binding domain AS86_5353 PF02609 Exonuclease VII small subunit AS86_5354 PF00348 Polyprenyl synthetase AS86_5355 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AS86_5355 PF02780 Transketolase, C-terminal domain AS86_5355 PF02779 Transketolase, pyrimidine binding domain AS86_5356 PF01479 S4 domain AS86_5356 PF01728 FtsJ-like methyltransferase AS86_5357 PF02863 Arginine repressor, C-terminal domain AS86_5357 PF01316 Arginine repressor, DNA binding domain AS86_5358 PF13476 AAA domain AS86_5359 PF17820 PDZ domain AS86_5359 PF05580 SpoIVB peptidase S55 AS86_536 PF08666 SAF domain AS86_536 PF03102 NeuB family AS86_5360 PF00072 Response regulator receiver domain AS86_5360 PF08769 Sporulation initiation factor Spo0A C terminal AS86_5368 PF02796 Helix-turn-helix domain of resolvase AS86_5368 PF00239 Resolvase, N terminal domain AS86_537 PF01098 Cell cycle protein AS86_5371 PF13276 HTH-like domain AS86_5371 PF00665 Integrase core domain AS86_5371 PF13333 Integrase core domain AS86_5377 PF14174 YycC-like protein AS86_5378 PF03009 Glycerophosphoryl diester phosphodiesterase family AS86_538 PF12996 DUF based on E. rectale Gene description (DUF3880) AS86_5380 PF02954 Bacterial regulatory protein, Fis family AS86_5380 PF00989 PAS fold AS86_5380 PF00158 Sigma-54 interaction domain AS86_5381 PF01515 Phosphate acetyl/butaryl transferase AS86_5382 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS86_5382 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS86_5383 PF00871 Acetokinase family AS86_5384 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS86_5384 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_5385 PF00676 Dehydrogenase E1 component AS86_5386 PF02779 Transketolase, pyrimidine binding domain AS86_5386 PF02780 Transketolase, C-terminal domain AS86_5387 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS86_5387 PF02817 e3 binding domain AS86_5387 PF00364 Biotin-requiring enzyme AS86_5388 PF01098 Cell cycle protein AS86_5389 PF04239 Protein of unknown function (DUF421) AS86_5390 PF00293 NUDIX domain AS86_5390 PF09297 NADH pyrophosphatase zinc ribbon domain AS86_5391 PF11208 Protein of unknown function (DUF2992) AS86_5392 PF06491 Disulphide isomerase AS86_5393 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS86_5394 PF00528 Binding-protein-dependent transport system inner membrane component AS86_5395 PF00005 ABC transporter AS86_5396 PF11728 Putative aromatic acid exporter C-terminal domain AS86_5396 PF06081 Aromatic acid exporter family member 1 AS86_5397 PF03734 L,D-transpeptidase catalytic domain AS86_5399 PF13302 Acetyltransferase (GNAT) domain AS86_5400 PF01546 Peptidase family M20/M25/M40 AS86_5400 PF07687 Peptidase dimerisation domain AS86_5402 PF00817 impB/mucB/samB family AS86_5402 PF11799 impB/mucB/samB family C-terminal domain AS86_5402 PF11798 IMS family HHH motif AS86_5403 PF02308 MgtC family AS86_5404 PF00690 Cation transporter/ATPase, N-terminus AS86_5404 PF00689 Cation transporting ATPase, C-terminus AS86_5407 PF12706 Beta-lactamase superfamily domain AS86_5407 PF00753 Metallo-beta-lactamase superfamily AS86_5409 PF01842 ACT domain AS86_5409 PF03315 Serine dehydratase beta chain AS86_541 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_5410 PF03313 Serine dehydratase alpha chain AS86_5411 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS86_5411 PF03807 NADP oxidoreductase coenzyme F420-dependent AS86_5412 PF00753 Metallo-beta-lactamase superfamily AS86_5413 PF00106 short chain dehydrogenase AS86_5415 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS86_5415 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS86_5416 PF01960 ArgJ family AS86_5417 PF00696 Amino acid kinase family AS86_5418 PF00202 Aminotransferase class-III AS86_5419 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS86_5419 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS86_542 PF00753 Metallo-beta-lactamase superfamily AS86_5422 PF01037 Lrp/AsnC ligand binding domain AS86_5422 PF13404 AsnC-type helix-turn-helix domain AS86_5424 PF02872 5'-nucleotidase, C-terminal domain AS86_5424 PF00149 Calcineurin-like phosphoesterase AS86_5427 PF00202 Aminotransferase class-III AS86_5429 PF00155 Aminotransferase class I and II AS86_5430 PF12697 Alpha/beta hydrolase family AS86_5430 PF08241 Methyltransferase domain AS86_5431 PF13847 Methyltransferase domain AS86_5432 PF06968 Biotin and Thiamin Synthesis associated domain AS86_5432 PF04055 Radical SAM superfamily AS86_5434 PF00885 6,7-dimethyl-8-ribityllumazine synthase AS86_5435 PF00925 GTP cyclohydrolase II AS86_5435 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AS86_5436 PF00677 Lumazine binding domain AS86_5437 PF01872 RibD C-terminal domain AS86_5437 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS86_5439 PF10827 Protein of unknown function (DUF2552) AS86_5440 PF12146 Serine aminopeptidase, S33 AS86_5441 PF00583 Acetyltransferase (GNAT) family AS86_5442 PF00356 Bacterial regulatory proteins, lacI family AS86_5443 PF13726 Na+-H+ antiporter family AS86_5443 PF03553 Na+/H+ antiporter family AS86_5444 PF12146 Serine aminopeptidase, S33 AS86_5446 PF00746 LPXTG cell wall anchor motif AS86_5446 PF00149 Calcineurin-like phosphoesterase AS86_5446 PF00565 Staphylococcal nuclease homologue AS86_5446 PF02872 5'-nucleotidase, C-terminal domain AS86_5448 PF04229 GrpB protein AS86_5448 PF13673 Acetyltransferase (GNAT) domain AS86_5449 PF00248 Aldo/keto reductase family AS86_545 PF02913 FAD linked oxidases, C-terminal domain AS86_545 PF01565 FAD binding domain AS86_5450 PF00248 Aldo/keto reductase family AS86_5451 PF13072 Mother cell inhibitor of FtsZ AS86_5452 PF00293 NUDIX domain AS86_5454 PF01944 Stage II sporulation protein M AS86_5455 PF01475 Ferric uptake regulator family AS86_5456 PF14004 Protein of unknown function (DUF4227) AS86_5457 PF02899 Phage integrase, N-terminal SAM-like domain AS86_5457 PF00589 Phage integrase family AS86_5458 PF13115 YtkA-like AS86_5459 PF01676 Metalloenzyme superfamily AS86_546 PF01758 Sodium Bile acid symporter family AS86_5460 PF01048 Phosphorylase superfamily AS86_5461 PF00591 Glycosyl transferase family, a/b domain AS86_5461 PF02885 Glycosyl transferase family, helical bundle domain AS86_5461 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AS86_5462 PF01544 CorA-like Mg2+ transporter protein AS86_5463 PF00860 Permease family AS86_5465 PF01047 MarR family AS86_5469 PF00005 ABC transporter AS86_5470 PF00392 Bacterial regulatory proteins, gntR family AS86_5471 PF07943 Penicillin-binding protein 5, C-terminal domain AS86_5471 PF00768 D-alanyl-D-alanine carboxypeptidase AS86_5472 PF01740 STAS domain AS86_5473 PF13581 Histidine kinase-like ATPase domain AS86_5474 PF04542 Sigma-70 region 2 AS86_5474 PF04539 Sigma-70 region 3 AS86_5474 PF04545 Sigma-70, region 4 AS86_5475 PF00209 Sodium:neurotransmitter symporter family AS86_5477 PF12164 Stage V sporulation protein AA AS86_5478 PF13782 Stage V sporulation protein AB AS86_5479 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AS86_548 PF18801 response regulator aspartate phosphatase H, N terminal AS86_5480 PF07451 Stage V sporulation protein AD (SpoVAD) AS86_5481 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AS86_5482 PF14097 Stage V sporulation protein AE1 AS86_5483 PF03323 Bacillus/Clostridium GerA spore germination protein AS86_5485 PF06207 Protein of unknown function (DUF1002) AS86_5486 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AS86_5487 PF00583 Acetyltransferase (GNAT) family AS86_5488 PF03745 Domain of unknown function (DUF309) AS86_5490 PF02616 Segregation and condensation protein ScpA AS86_5491 PF04079 Segregation and condensation complex subunit ScpB AS86_5493 PF01979 Amidohydrolase family AS86_5494 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AS86_5497 PF03123 CAT RNA binding domain AS86_5497 PF00874 PRD domain AS86_5498 PF00367 phosphotransferase system, EIIB AS86_5498 PF02378 Phosphotransferase system, EIIC AS86_5498 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS86_5499 PF00381 PTS HPr component phosphorylation site AS86_550 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AS86_5500 PF05524 PEP-utilising enzyme, N-terminal AS86_5500 PF00391 PEP-utilising enzyme, mobile domain AS86_5500 PF02896 PEP-utilising enzyme, TIM barrel domain AS86_5503 PF00881 Nitroreductase family AS86_5504 PF00990 Diguanylate cyclase, GGDEF domain AS86_5505 PF00144 Beta-lactamase AS86_5506 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS86_5506 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS86_5509 PF03079 ARD/ARD' family AS86_551 PF08240 Alcohol dehydrogenase GroES-like domain AS86_551 PF00107 Zinc-binding dehydrogenase AS86_5510 PF00596 Class II Aldolase and Adducin N-terminal domain AS86_5512 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AS86_5512 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AS86_5513 PF00155 Aminotransferase class I and II AS86_5514 PF00795 Carbon-nitrogen hydrolase AS86_5515 PF01636 Phosphotransferase enzyme family AS86_5519 PF03551 Transcriptional regulator PadR-like family AS86_552 PF01022 Bacterial regulatory protein, arsR family AS86_5525 PF00293 NUDIX domain AS86_5526 PF00108 Thiolase, N-terminal domain AS86_5526 PF02803 Thiolase, C-terminal domain AS86_553 PF01494 FAD binding domain AS86_5534 PF17912 MalK OB fold domain AS86_5534 PF03459 TOBE domain AS86_5534 PF00005 ABC transporter AS86_5535 PF16657 Maltogenic Amylase, C-terminal domain AS86_5535 PF00128 Alpha amylase, catalytic domain AS86_5536 PF16657 Maltogenic Amylase, C-terminal domain AS86_5536 PF02903 Alpha amylase, N-terminal ig-like domain AS86_5536 PF00128 Alpha amylase, catalytic domain AS86_5537 PF13416 Bacterial extracellular solute-binding protein AS86_5538 PF00528 Binding-protein-dependent transport system inner membrane component AS86_5539 PF00528 Binding-protein-dependent transport system inner membrane component AS86_554 PF03009 Glycerophosphoryl diester phosphodiesterase family AS86_5540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS86_5540 PF00356 Bacterial regulatory proteins, lacI family AS86_5541 PF00155 Aminotransferase class I and II AS86_5543 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_5543 PF00512 His Kinase A (phospho-acceptor) domain AS86_5545 PF14040 Deoxyribonuclease NucA/NucB AS86_5547 PF08267 Cobalamin-independent synthase, N-terminal domain AS86_5547 PF01717 Cobalamin-independent synthase, Catalytic domain AS86_5549 PF07690 Major Facilitator Superfamily AS86_5554 PF14177 YkyB-like protein AS86_5555 PF02541 Ppx/GppA phosphatase family AS86_5556 PF02503 Polyphosphate kinase middle domain AS86_5556 PF13089 Polyphosphate kinase N-terminal domain AS86_5556 PF13090 Polyphosphate kinase C-terminal domain 2 AS86_5556 PF17941 Polyphosphate kinase C-terminal domain 1 AS86_5558 PF00149 Calcineurin-like phosphoesterase AS86_5558 PF10518 TAT (twin-arginine translocation) pathway signal sequence AS86_556 PF03466 LysR substrate binding domain AS86_556 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_5560 PF00563 EAL domain AS86_5560 PF10388 EAL-domain associated signalling protein domain AS86_5563 PF08796 Protein of unknown function (DUF1797) AS86_5565 PF04308 Ribonuclease H-like AS86_5568 PF03466 LysR substrate binding domain AS86_5568 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_5569 PF14602 Hexapeptide repeat of succinyl-transferase AS86_5569 PF00132 Bacterial transferase hexapeptide (six repeats) AS86_5569 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AS86_5570 PF07687 Peptidase dimerisation domain AS86_5570 PF01546 Peptidase family M20/M25/M40 AS86_5572 PF02254 TrkA-N domain AS86_5572 PF02080 TrkA-C domain AS86_5573 PF17770 Ribonuclease J C-terminal domain AS86_5573 PF00753 Metallo-beta-lactamase superfamily AS86_5573 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AS86_5576 PF01327 Polypeptide deformylase AS86_5578 PF00676 Dehydrogenase E1 component AS86_5579 PF02780 Transketolase, C-terminal domain AS86_5579 PF02779 Transketolase, pyrimidine binding domain AS86_5580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS86_5580 PF00364 Biotin-requiring enzyme AS86_5580 PF02817 e3 binding domain AS86_5581 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_5581 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS86_5589 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AS86_5589 PF01276 Orn/Lys/Arg decarboxylase, major domain AS86_5590 PF05256 Uncharacterised protein family (UPF0223) AS86_5591 PF06335 Protein of unknown function (DUF1054) AS86_5593 PF00459 Inositol monophosphatase family AS86_5596 PF14036 YlaH-like protein AS86_5598 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) AS86_560 PF00144 Beta-lactamase AS86_5600 PF02562 PhoH-like protein AS86_5600 PF13638 PIN domain AS86_5602 PF07408 Protein of unknown function (DUF1507) AS86_5603 PF01098 Cell cycle protein AS86_5604 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS86_5604 PF02785 Biotin carboxylase C-terminal domain AS86_5604 PF00364 Biotin-requiring enzyme AS86_5604 PF02436 Conserved carboxylase domain AS86_5604 PF00682 HMGL-like AS86_5604 PF00289 Biotin carboxylase, N-terminal domain AS86_5605 PF02628 Cytochrome oxidase assembly protein AS86_5606 PF01040 UbiA prenyltransferase family AS86_5607 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AS86_5607 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AS86_5607 PF00034 Cytochrome c AS86_5608 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS86_5609 PF00510 Cytochrome c oxidase subunit III AS86_561 PF04371 Porphyromonas-type peptidyl-arginine deiminase AS86_5610 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AS86_5611 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AS86_5612 PF00795 Carbon-nitrogen hydrolase AS86_5613 PF08868 YugN-like family AS86_5614 PF14504 CAP-associated N-terminal AS86_5614 PF00188 Cysteine-rich secretory protein family AS86_5615 PF14071 Putative coat protein AS86_5616 PF14003 YlbE-like protein AS86_5617 PF00300 Histidine phosphatase superfamily (branch 1) AS86_5618 PF06133 Control of competence regulator ComK, YlbF/YmcA AS86_5619 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AS86_562 PF06146 Phosphate-starvation-inducible E AS86_5622 PF07670 Nucleoside recognition AS86_5623 PF01467 Cytidylyltransferase-like AS86_5624 PF01734 Patatin-like phospholipase AS86_5625 PF13180 PDZ domain AS86_5625 PF05362 Lon protease (S16) C-terminal proteolytic domain AS86_5626 PF05636 HIGH Nucleotidyl Transferase AS86_5627 PF02620 Large ribosomal RNA subunit accumulation protein YceD AS86_5628 PF01783 Ribosomal L32p protein family AS86_5630 PF00583 Acetyltransferase (GNAT) family AS86_5631 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS86_5631 PF02558 Ketopantoate reductase PanE/ApbA AS86_5632 PF10079 Bacillithiol biosynthesis BshC AS86_5633 PF01795 MraW methylase family AS86_5634 PF04977 Septum formation initiator AS86_5636 PF00905 Penicillin binding protein transpeptidase domain AS86_5636 PF03717 Penicillin-binding Protein dimerisation domain AS86_5636 PF03793 PASTA domain AS86_5637 PF02875 Mur ligase family, glutamate ligase domain AS86_5637 PF08245 Mur ligase middle domain AS86_5637 PF01225 Mur ligase family, catalytic domain AS86_5638 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AS86_5638 PF00953 Glycosyl transferase family 4 AS86_5639 PF08245 Mur ligase middle domain AS86_5639 PF02875 Mur ligase family, glutamate ligase domain AS86_5640 PF01098 Cell cycle protein AS86_5641 PF04101 Glycosyltransferase family 28 C-terminal domain AS86_5641 PF03033 Glycosyltransferase family 28 N-terminal domain AS86_5642 PF01565 FAD binding domain AS86_5642 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AS86_5643 PF08478 POTRA domain, FtsQ-type AS86_5643 PF03799 Cell division protein FtsQ AS86_5644 PF02491 SHS2 domain inserted in FTSA AS86_5645 PF00091 Tubulin/FtsZ family, GTPase domain AS86_5645 PF12327 FtsZ family, C-terminal domain AS86_5646 PF03419 Sporulation factor SpoIIGA AS86_5647 PF04545 Sigma-70, region 4 AS86_5647 PF04542 Sigma-70 region 2 AS86_5648 PF04542 Sigma-70 region 2 AS86_5648 PF04545 Sigma-70, region 4 AS86_5648 PF04539 Sigma-70 region 3 AS86_5649 PF05239 PRC-barrel domain AS86_565 PF04371 Porphyromonas-type peptidyl-arginine deiminase AS86_5651 PF01168 Alanine racemase, N-terminal domain AS86_5652 PF04472 Cell division protein SepF AS86_5653 PF02325 YGGT family AS86_5654 PF17774 Putative RNA-binding domain in YlmH AS86_5654 PF01479 S4 domain AS86_5655 PF05103 DivIVA protein AS86_5656 PF08264 Anticodon-binding domain of tRNA AS86_5656 PF00133 tRNA synthetases class I (I, L, M and V) AS86_5656 PF06827 Zinc finger found in FPG and IleRS AS86_5658 PF01252 Signal peptidase (SPase) II AS86_5659 PF01479 S4 domain AS86_5659 PF00849 RNA pseudouridylate synthase AS86_566 PF01432 Peptidase family M3 AS86_566 PF08439 Oligopeptidase F AS86_5660 PF00156 Phosphoribosyl transferase domain AS86_5661 PF00860 Permease family AS86_5662 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS86_5662 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS86_5663 PF01979 Amidohydrolase family AS86_5664 PF00117 Glutamine amidotransferase class-I AS86_5664 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AS86_5665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS86_5665 PF02142 MGS-like domain AS86_5665 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS86_5666 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AS86_5666 PF00970 Oxidoreductase FAD-binding domain AS86_5667 PF01180 Dihydroorotate dehydrogenase AS86_5668 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AS86_5669 PF00156 Phosphoribosyl transferase domain AS86_567 PF00797 N-acetyltransferase AS86_5675 PF01321 Creatinase/Prolidase N-terminal domain AS86_5675 PF00557 Metallopeptidase family M24 AS86_5677 PF00690 Cation transporter/ATPase, N-terminus AS86_5677 PF00689 Cation transporting ATPase, C-terminus AS86_5678 PF08340 Domain of unknown function (DUF1732) AS86_5678 PF03755 YicC-like family, N-terminal region AS86_5679 PF04025 Domain of unknown function (DUF370) AS86_568 PF09154 Domain of unknown function (DUF1939) AS86_568 PF00128 Alpha amylase, catalytic domain AS86_5680 PF00625 Guanylate kinase AS86_5681 PF01192 RNA polymerase Rpb6 AS86_5682 PF04127 DNA / pantothenate metabolism flavoprotein AS86_5682 PF02441 Flavoprotein AS86_5683 PF00271 Helicase conserved C-terminal domain AS86_5683 PF04851 Type III restriction enzyme, res subunit AS86_5683 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AS86_5683 PF18074 Primosomal protein N C-terminal domain AS86_5683 PF17764 3′ DNA-binding domain (3′BD) AS86_5684 PF01327 Polypeptide deformylase AS86_5685 PF00551 Formyl transferase AS86_5685 PF02911 Formyl transferase, C-terminal domain AS86_5686 PF01189 16S rRNA methyltransferase RsmB/F AS86_5686 PF01029 NusB family AS86_5687 PF04055 Radical SAM superfamily AS86_5689 PF00069 Protein kinase domain AS86_5689 PF03793 PASTA domain AS86_5690 PF03193 RsgA GTPase AS86_5690 PF16745 RsgA N-terminal domain AS86_5691 PF00834 Ribulose-phosphate 3 epimerase family AS86_5692 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AS86_5692 PF04263 Thiamin pyrophosphokinase, catalytic domain AS86_5693 PF00830 Ribosomal L28 family AS86_5694 PF03780 Asp23 family, cell envelope-related function AS86_5695 PF13684 Dihydroxyacetone kinase family AS86_5695 PF02734 DAK2 domain AS86_5696 PF17191 RecG wedge domain AS86_5696 PF00271 Helicase conserved C-terminal domain AS86_5696 PF00270 DEAD/DEAH box helicase AS86_5697 PF03061 Thioesterase superfamily AS86_5698 PF02504 Fatty acid synthesis protein AS86_5699 PF00698 Acyl transferase domain AS86_570 PF01713 Smr domain AS86_570 PF00488 MutS domain V AS86_5701 PF00550 Phosphopantetheine attachment site AS86_5702 PF14622 Ribonuclease-III-like AS86_5702 PF00035 Double-stranded RNA binding motif AS86_5703 PF13610 DDE domain AS86_5705 PF01098 Cell cycle protein AS86_5708 PF02687 FtsX-like permease family AS86_5709 PF00005 ABC transporter AS86_5710 PF00313 'Cold-shock' DNA-binding domain AS86_5714 PF02559 CarD-like/TRCF domain AS86_5718 PF10842 Protein of unknown function (DUF2642) AS86_5720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_5720 PF03466 LysR substrate binding domain AS86_5721 PF01596 O-methyltransferase AS86_5722 PF07690 Major Facilitator Superfamily AS86_5723 PF00440 Bacterial regulatory proteins, tetR family AS86_5727 PF07690 Major Facilitator Superfamily AS86_5728 PF00561 alpha/beta hydrolase fold AS86_573 PF00107 Zinc-binding dehydrogenase AS86_573 PF08240 Alcohol dehydrogenase GroES-like domain AS86_5731 PF00005 ABC transporter AS86_5732 PF00392 Bacterial regulatory proteins, gntR family AS86_5734 PF05116 Sucrose-6F-phosphate phosphohydrolase AS86_5735 PF01925 Sulfite exporter TauE/SafE AS86_5738 PF17209 Hfq protein AS86_5739 PF01022 Bacterial regulatory protein, arsR family AS86_574 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_574 PF03466 LysR substrate binding domain AS86_5741 PF13419 Haloacid dehalogenase-like hydrolase AS86_5742 PF00455 DeoR C terminal sensor domain AS86_5742 PF08220 DeoR-like helix-turn-helix domain AS86_5744 PF03551 Transcriptional regulator PadR-like family AS86_5745 PF01609 Transposase DDE domain AS86_5749 PF18801 response regulator aspartate phosphatase H, N terminal AS86_5757 PF13154 Protein of unknown function (DUF3991) AS86_5758 PF01131 DNA topoisomerase AS86_5758 PF13342 C-terminal repeat of topoisomerase AS86_5758 PF01751 Toprim domain AS86_576 PF10901 Protein of unknown function (DUF2690) AS86_5769 PF00877 NlpC/P60 family AS86_5770 PF01348 Type II intron maturase AS86_5770 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AS86_579 PF13170 Protein of unknown function (DUF4003) AS86_580 PF05675 Protein of unknown function (DUF817) AS86_5801 PF00171 Aldehyde dehydrogenase family AS86_5801 PF00465 Iron-containing alcohol dehydrogenase AS86_5804 PF04055 Radical SAM superfamily AS86_5805 PF13597 Anaerobic ribonucleoside-triphosphate reductase AS86_5805 PF03477 ATP cone domain AS86_5806 PF14256 YwiC-like protein AS86_5808 PF00753 Metallo-beta-lactamase superfamily AS86_5808 PF00258 Flavodoxin AS86_5809 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS86_5809 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_5809 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS86_5809 PF04324 BFD-like [2Fe-2S] binding domain AS86_5809 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS86_5810 PF00301 Rubredoxin AS86_5811 PF00325 Bacterial regulatory proteins, crp family AS86_5811 PF00027 Cyclic nucleotide-binding domain AS86_5813 PF07282 Putative transposase DNA-binding domain AS86_5813 PF01385 Probable transposase AS86_5813 PF12323 Helix-turn-helix domain AS86_5814 PF13529 Peptidase_C39 like family AS86_5815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS86_5815 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS86_5815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS86_5815 PF04324 BFD-like [2Fe-2S] binding domain AS86_5816 PF01226 Formate/nitrite transporter AS86_5817 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS86_5817 PF00056 lactate/malate dehydrogenase, NAD binding domain AS86_5819 PF13520 Amino acid permease AS86_582 PF00583 Acetyltransferase (GNAT) family AS86_5820 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS86_5820 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS86_5821 PF00291 Pyridoxal-phosphate dependent enzyme AS86_5822 PF13520 Amino acid permease AS86_5823 PF07859 alpha/beta hydrolase fold AS86_5824 PF00704 Glycosyl hydrolases family 18 AS86_5824 PF00553 Cellulose binding domain AS86_5824 PF00041 Fibronectin type III domain AS86_5826 PF00082 Subtilase family AS86_5831 PF00665 Integrase core domain AS86_5831 PF13333 Integrase core domain AS86_5831 PF13276 HTH-like domain AS86_5833 PF03060 Nitronate monooxygenase AS86_5836 PF16736 Single Cache-like AS86_5836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_5836 PF00512 His Kinase A (phospho-acceptor) domain AS86_5836 PF00989 PAS fold AS86_5837 PF00486 Transcriptional regulatory protein, C terminal AS86_5837 PF00072 Response regulator receiver domain AS86_5839 PF13180 PDZ domain AS86_584 PF03600 Citrate transporter AS86_5841 PF12704 MacB-like periplasmic core domain AS86_5841 PF02687 FtsX-like permease family AS86_5842 PF00005 ABC transporter AS86_5843 PF00216 Bacterial DNA-binding protein AS86_5845 PF03965 Penicillinase repressor AS86_5847 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AS86_585 PF08830 Protein of unknown function (DUF1806) AS86_5851 PF02839 Carbohydrate binding domain AS86_5852 PF12323 Helix-turn-helix domain AS86_5852 PF07282 Putative transposase DNA-binding domain AS86_5852 PF01385 Probable transposase AS86_5853 PF00465 Iron-containing alcohol dehydrogenase AS86_5854 PF00158 Sigma-54 interaction domain AS86_5854 PF01590 GAF domain AS86_5855 PF02733 Dak1 domain AS86_5856 PF02734 DAK2 domain AS86_5857 PF00381 PTS HPr component phosphorylation site AS86_5858 PF00230 Major intrinsic protein AS86_5859 PF03830 PTS system sorbose subfamily IIB component AS86_5859 PF03610 PTS system fructose IIA component AS86_586 PF02585 GlcNAc-PI de-N-acetylase AS86_5860 PF03609 PTS system sorbose-specific iic component AS86_5861 PF03613 PTS system mannose/fructose/sorbose family IID component AS86_5863 PF01476 LysM domain AS86_5863 PF01471 Putative peptidoglycan binding domain AS86_5863 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_5864 PF03992 Antibiotic biosynthesis monooxygenase AS86_5865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_5866 PF01609 Transposase DDE domain AS86_5867 PF01609 Transposase DDE domain AS86_5868 PF03965 Penicillinase repressor AS86_5870 PF09587 Bacterial capsule synthesis protein PGA_cap AS86_5871 PF02557 D-alanyl-D-alanine carboxypeptidase AS86_5873 PF01381 Helix-turn-helix AS86_5876 PF12389 Camelysin metallo-endopeptidase AS86_5877 PF11799 impB/mucB/samB family C-terminal domain AS86_5877 PF11798 IMS family HHH motif AS86_5877 PF00817 impB/mucB/samB family AS86_5879 PF13333 Integrase core domain AS86_5879 PF00665 Integrase core domain AS86_5879 PF13276 HTH-like domain AS86_5880 PF00692 dUTPase AS86_5882 PF01385 Probable transposase AS86_5882 PF12323 Helix-turn-helix domain AS86_5882 PF07282 Putative transposase DNA-binding domain AS86_5883 PF04134 Protein of unknown function, DUF393 AS86_5886 PF13520 Amino acid permease AS86_5890 PF01381 Helix-turn-helix AS86_5893 PF01740 STAS domain AS86_5893 PF00916 Sulfate permease family AS86_5895 PF01022 Bacterial regulatory protein, arsR family AS86_5897 PF00797 N-acetyltransferase AS86_5898 PF00704 Glycosyl hydrolases family 18 AS86_5898 PF00041 Fibronectin type III domain AS86_5902 PF09397 Ftsk gamma domain AS86_5902 PF01580 FtsK/SpoIIIE family AS86_5902 PF17854 FtsK alpha domain AS86_5904 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS86_5904 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS86_5905 PF00291 Pyridoxal-phosphate dependent enzyme AS86_5906 PF00912 Transglycosylase AS86_5906 PF00905 Penicillin binding protein transpeptidase domain AS86_5909 PF03009 Glycerophosphoryl diester phosphodiesterase family AS86_591 PF07690 Major Facilitator Superfamily AS86_5910 PF01316 Arginine repressor, DNA binding domain AS86_5910 PF02863 Arginine repressor, C-terminal domain AS86_5911 PF05043 Mga helix-turn-helix domain AS86_5911 PF08279 HTH domain AS86_5911 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS86_5911 PF00874 PRD domain AS86_5912 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS86_5912 PF02378 Phosphotransferase system, EIIC AS86_5912 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS86_5913 PF01238 Phosphomannose isomerase type I AS86_5914 PF00672 HAMP domain AS86_5914 PF00512 His Kinase A (phospho-acceptor) domain AS86_5914 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_5915 PF00486 Transcriptional regulatory protein, C terminal AS86_5915 PF00072 Response regulator receiver domain AS86_5918 PF00005 ABC transporter AS86_592 PF00324 Amino acid permease AS86_5921 PF00324 Amino acid permease AS86_5922 PF02574 Homocysteine S-methyltransferase AS86_5923 PF01022 Bacterial regulatory protein, arsR family AS86_5924 PF01381 Helix-turn-helix AS86_5927 PF13276 HTH-like domain AS86_5927 PF00665 Integrase core domain AS86_5927 PF13333 Integrase core domain AS86_5928 PF01527 Transposase AS86_593 PF08240 Alcohol dehydrogenase GroES-like domain AS86_593 PF00107 Zinc-binding dehydrogenase AS86_5931 PF00248 Aldo/keto reductase family AS86_5932 PF13193 AMP-binding enzyme C-terminal domain AS86_5932 PF00975 Thioesterase domain AS86_5932 PF00501 AMP-binding enzyme AS86_5932 PF00668 Condensation domain AS86_5932 PF00550 Phosphopantetheine attachment site AS86_594 PF00753 Metallo-beta-lactamase superfamily AS86_5942 PF13495 Phage integrase, N-terminal SAM-like domain AS86_5942 PF00589 Phage integrase family AS86_5944 PF01769 Divalent cation transporter AS86_5944 PF00571 CBS domain AS86_5944 PF03448 MgtE intracellular N domain AS86_5945 PF01098 Cell cycle protein AS86_5946 PF11954 Domain of unknown function (DUF3471) AS86_5946 PF00144 Beta-lactamase AS86_5947 PF01494 FAD binding domain AS86_5948 PF07690 Major Facilitator Superfamily AS86_5949 PF01047 MarR family AS86_5950 PF01047 MarR family AS86_5951 PF00067 Cytochrome P450 AS86_5952 PF16715 Cyclodipeptide synthase AS86_5956 PF01609 Transposase DDE domain AS86_5958 PF01609 Transposase DDE domain AS86_5960 PF04321 RmlD substrate binding domain AS86_5961 PF16363 GDP-mannose 4,6 dehydratase AS86_5962 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AS86_5963 PF00483 Nucleotidyl transferase AS86_5964 PF00109 Beta-ketoacyl synthase, N-terminal domain AS86_5964 PF02801 Beta-ketoacyl synthase, C-terminal domain AS86_5965 PF01571 Aminomethyltransferase folate-binding domain AS86_5965 PF08669 Glycine cleavage T-protein C-terminal barrel domain AS86_5968 PF07977 FabA-like domain AS86_5969 PF00550 Phosphopantetheine attachment site AS86_5971 PF00698 Acyl transferase domain AS86_5974 PF00005 ABC transporter AS86_5975 PF05045 Rhamnan synthesis protein F AS86_5975 PF14307 Glycosyltransferase WbsX AS86_5983 PF01381 Helix-turn-helix AS86_5985 PF01022 Bacterial regulatory protein, arsR family AS86_5989 PF02801 Beta-ketoacyl synthase, C-terminal domain AS86_5989 PF00109 Beta-ketoacyl synthase, N-terminal domain AS86_5990 PF17827 PrmC N-terminal domain AS86_5990 PF05175 Methyltransferase small domain AS86_5992 PF03412 Peptidase C39 family AS86_5992 PF00005 ABC transporter AS86_5992 PF00664 ABC transporter transmembrane region AS86_5993 PF00005 ABC transporter AS86_5993 PF00664 ABC transporter transmembrane region AS86_5995 PF01648 4'-phosphopantetheinyl transferase superfamily AS86_5996 PF00733 Asparagine synthase AS86_5996 PF13537 Glutamine amidotransferase domain AS86_5999 PF07977 FabA-like domain AS86_6000 PF03061 Thioesterase superfamily AS86_6001 PF00109 Beta-ketoacyl synthase, N-terminal domain AS86_6001 PF02801 Beta-ketoacyl synthase, C-terminal domain AS86_6002 PF00550 Phosphopantetheine attachment site AS86_6004 PF00501 AMP-binding enzyme AS86_6004 PF13193 AMP-binding enzyme C-terminal domain AS86_6005 PF13193 AMP-binding enzyme C-terminal domain AS86_6005 PF00501 AMP-binding enzyme AS86_6013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_6013 PF00672 HAMP domain AS86_6013 PF00512 His Kinase A (phospho-acceptor) domain AS86_6014 PF00072 Response regulator receiver domain AS86_6014 PF00486 Transcriptional regulatory protein, C terminal AS86_6017 PF01464 Transglycosylase SLT domain AS86_6017 PF01551 Peptidase family M23 AS86_6017 PF10145 Phage-related minor tail protein AS86_6019 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS86_602 PF00144 Beta-lactamase AS86_6021 PF13610 DDE domain AS86_6022 PF01609 Transposase DDE domain AS86_6027 PF00005 ABC transporter AS86_6028 PF02687 FtsX-like permease family AS86_6028 PF12704 MacB-like periplasmic core domain AS86_6029 PF08220 DeoR-like helix-turn-helix domain AS86_6029 PF00455 DeoR C terminal sensor domain AS86_6030 PF13419 Haloacid dehalogenase-like hydrolase AS86_6031 PF13610 DDE domain AS86_6032 PF00905 Penicillin binding protein transpeptidase domain AS86_6032 PF03717 Penicillin-binding Protein dimerisation domain AS86_6034 PF04542 Sigma-70 region 2 AS86_6034 PF08281 Sigma-70, region 4 AS86_6036 PF00553 Cellulose binding domain AS86_6036 PF00704 Glycosyl hydrolases family 18 AS86_6036 PF00041 Fibronectin type III domain AS86_6037 PF00553 Cellulose binding domain AS86_6037 PF00704 Glycosyl hydrolases family 18 AS86_6037 PF00041 Fibronectin type III domain AS86_606 PF00753 Metallo-beta-lactamase superfamily AS86_6075 PF00204 DNA gyrase B AS86_6075 PF01751 Toprim domain AS86_6075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_6075 PF00986 DNA gyrase B subunit, carboxyl terminus AS86_6076 PF00521 DNA gyrase/topoisomerase IV, subunit A AS86_6076 PF03989 DNA gyrase C-terminal domain, beta-propeller AS86_608 PF03063 Prismane/CO dehydrogenase family AS86_6090 PF01807 CHC2 zinc finger AS86_6090 PF08275 DNA primase catalytic core, N-terminal domain AS86_61 PF00772 DnaB-like helicase N terminal domain AS86_61 PF03796 DnaB-like helicase C terminal domain AS86_612 PF13732 Domain of unknown function (DUF4162) AS86_612 PF00005 ABC transporter AS86_613 PF01061 ABC-2 type transporter AS86_6134 PF02557 D-alanyl-D-alanine carboxypeptidase AS86_6155 PF01555 DNA methylase AS86_6166 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AS86_6166 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain AS86_6166 PF17890 Peptidoglycan hydrolase LytB WW-like domain AS86_6166 PF01473 Putative cell wall binding repeat AS86_617 PF04542 Sigma-70 region 2 AS86_618 PF12791 Anti-sigma factor N-terminus AS86_6182 PF02661 Fic/DOC family AS86_619 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain AS86_619 PF01522 Polysaccharide deacetylase AS86_6192 PF01471 Putative peptidoglycan binding domain AS86_6192 PF01476 LysM domain AS86_6192 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_6193 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_6193 PF01476 LysM domain AS86_6193 PF01471 Putative peptidoglycan binding domain AS86_620 PF01022 Bacterial regulatory protein, arsR family AS86_6218 PF01612 3'-5' exonuclease AS86_6218 PF00476 DNA polymerase family A AS86_6218 PF01367 5'-3' exonuclease, C-terminal SAM fold AS86_6218 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS86_622 PF01494 FAD binding domain AS86_6223 PF17283 SprT-like zinc ribbon domain AS86_6223 PF10263 SprT-like family AS86_623 PF01638 HxlR-like helix-turn-helix AS86_6236 PF00498 FHA domain AS86_624 PF02525 Flavodoxin-like fold AS86_6240 PF01966 HD domain AS86_625 PF00501 AMP-binding enzyme AS86_625 PF13193 AMP-binding enzyme C-terminal domain AS86_6255 PF00069 Protein kinase domain AS86_6255 PF03793 PASTA domain AS86_627 PF02567 Phenazine biosynthesis-like protein AS86_636 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS86_636 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS86_6361 PF00580 UvrD/REP helicase N-terminal domain AS86_6361 PF13361 UvrD-like helicase C-terminal domain AS86_637 PF00392 Bacterial regulatory proteins, gntR family AS86_637 PF07702 UTRA domain AS86_638 PF01638 HxlR-like helix-turn-helix AS86_639 PF03960 ArsC family AS86_6418 PF01367 5'-3' exonuclease, C-terminal SAM fold AS86_6418 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS86_6418 PF00476 DNA polymerase family A AS86_6423 PF04203 Sortase domain AS86_6449 PF13529 Peptidase_C39 like family AS86_647 PF03928 Haem-degrading AS86_648 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AS86_648 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AS86_649 PF00456 Transketolase, thiamine diphosphate binding domain AS86_649 PF02779 Transketolase, pyrimidine binding domain AS86_649 PF02780 Transketolase, C-terminal domain AS86_650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS86_650 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AS86_651 PF00923 Transaldolase/Fructose-6-phosphate aldolase AS86_652 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS86_652 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS86_653 PF10282 Lactonase, 7-bladed beta-propeller AS86_6531 PF01966 HD domain AS86_6531 PF01743 Poly A polymerase head domain AS86_6531 PF12627 Probable RNA and SrmB- binding site of polymerase A AS86_654 PF06906 Protein of unknown function (DUF1272) AS86_6540 PF04026 SpoVG AS86_6545 PF03960 ArsC family AS86_655 PF00805 Pentapeptide repeats (8 copies) AS86_6559 PF14579 Helix-hairpin-helix motif AS86_6559 PF01336 OB-fold nucleic acid binding domain AS86_6559 PF02811 PHP domain AS86_6559 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS86_6559 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS86_6561 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS86_6561 PF14579 Helix-hairpin-helix motif AS86_6561 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS86_6561 PF02811 PHP domain AS86_6564 PF03120 NAD-dependent DNA ligase OB-fold domain AS86_6564 PF01653 NAD-dependent DNA ligase adenylation domain AS86_6564 PF12826 Helix-hairpin-helix motif AS86_6564 PF00533 BRCA1 C Terminus (BRCT) domain AS86_6566 PF01348 Type II intron maturase AS86_6566 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AS86_6568 PF06908 YspA SLOG family AS86_6578 PF18801 response regulator aspartate phosphatase H, N terminal AS86_658 PF00892 EamA-like transporter family AS86_659 PF13411 MerR HTH family regulatory protein AS86_6590 PF01476 LysM domain AS86_6590 PF01471 Putative peptidoglycan binding domain AS86_6590 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_660 PF01595 Cyclin M transmembrane N-terminal domain AS86_660 PF00571 CBS domain AS86_660 PF03471 Transporter associated domain AS86_6610 PF00265 Thymidine kinase AS86_6612 PF00436 Single-strand binding protein family AS86_6614 PF00154 recA bacterial DNA recombination protein AS86_662 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_6621 PF00303 Thymidylate synthase AS86_6622 PF00186 Dihydrofolate reductase AS86_6625 PF13361 UvrD-like helicase C-terminal domain AS86_6625 PF00580 UvrD/REP helicase N-terminal domain AS86_6626 PF00692 dUTPase AS86_6627 PF02223 Thymidylate kinase AS86_6635 PF03330 Lytic transglycolase AS86_6636 PF00176 SNF2 family N-terminal domain AS86_6636 PF00271 Helicase conserved C-terminal domain AS86_6638 PF00072 Response regulator receiver domain AS86_6638 PF00486 Transcriptional regulatory protein, C terminal AS86_6639 PF00672 HAMP domain AS86_6639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_6639 PF18698 Histidine kinase sensor domain AS86_6639 PF00512 His Kinase A (phospho-acceptor) domain AS86_6639 PF00989 PAS fold AS86_6640 PF18719 ArlS sensor domain AS86_6640 PF00512 His Kinase A (phospho-acceptor) domain AS86_6640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_6645 PF01712 Deoxynucleoside kinase AS86_6647 PF12706 Beta-lactamase superfamily domain AS86_666 PF07690 Major Facilitator Superfamily AS86_6670 PF00149 Calcineurin-like phosphoesterase AS86_668 PF08003 Protein of unknown function (DUF1698) AS86_6683 PF14572 Phosphoribosyl synthetase-associated domain AS86_6683 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AS86_6684 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AS86_6685 PF08459 UvrC Helix-hairpin-helix N-terminal AS86_6685 PF02151 UvrB/uvrC motif AS86_6685 PF01541 GIY-YIG catalytic domain AS86_6688 PF02342 TerD domain AS86_6689 PF02342 TerD domain AS86_6692 PF03741 Integral membrane protein TerC family AS86_6694 PF02146 Sir2 family AS86_6696 PF01773 Na+ dependent nucleoside transporter N-terminus AS86_6696 PF07662 Na+ dependent nucleoside transporter C-terminus AS86_6697 PF00082 Subtilase family AS86_6699 PF02334 Replication terminator protein AS86_6701 PF13495 Phage integrase, N-terminal SAM-like domain AS86_6701 PF00589 Phage integrase family AS86_6702 PF07972 NrdI Flavodoxin like AS86_6703 PF00317 Ribonucleotide reductase, all-alpha domain AS86_6703 PF02867 Ribonucleotide reductase, barrel domain AS86_6703 PF08343 Ribonucleotide reductase N-terminal AS86_6704 PF00268 Ribonucleotide reductase, small chain AS86_6712 PF14436 Bacterial EndoU nuclease AS86_6712 PF04740 LXG domain of WXG superfamily AS86_674 PF01594 AI-2E family transporter AS86_675 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AS86_675 PF13288 DXP reductoisomerase C-terminal domain AS86_675 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AS86_676 PF00579 tRNA synthetases class I (W and Y) AS86_678 PF00005 ABC transporter AS86_6794 PF01051 Initiator Replication protein AS86_6797 PF00069 Protein kinase domain AS86_6800 PF00664 ABC transporter transmembrane region AS86_6800 PF00005 ABC transporter AS86_6801 PF03551 Transcriptional regulator PadR-like family AS86_6804 PF13700 Domain of unknown function (DUF4158) AS86_6804 PF01526 Tn3 transposase DDE domain AS86_6805 PF02796 Helix-turn-helix domain of resolvase AS86_6805 PF00239 Resolvase, N terminal domain AS86_681 PF14602 Hexapeptide repeat of succinyl-transferase AS86_681 PF12464 Maltose acetyltransferase AS86_6810 PF01609 Transposase DDE domain AS86_6812 PF03062 MBOAT, membrane-bound O-acyltransferase family AS86_6813 PF05593 RHS Repeat AS86_6816 PF02796 Helix-turn-helix domain of resolvase AS86_6816 PF00239 Resolvase, N terminal domain AS86_6817 PF01609 Transposase DDE domain AS86_6819 PF03060 Nitronate monooxygenase AS86_682 PF07690 Major Facilitator Superfamily AS86_6820 PF03466 LysR substrate binding domain AS86_6820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_683 PF00480 ROK family AS86_6830 PF13610 DDE domain AS86_6833 PF13700 Domain of unknown function (DUF4158) AS86_6833 PF01526 Tn3 transposase DDE domain AS86_6836 PF02796 Helix-turn-helix domain of resolvase AS86_6836 PF00239 Resolvase, N terminal domain AS86_6837 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AS86_684 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_6851 PF01580 FtsK/SpoIIIE family AS86_6851 PF09397 Ftsk gamma domain AS86_6851 PF17854 FtsK alpha domain AS86_686 PF00293 NUDIX domain AS86_6875 PF01183 Glycosyl hydrolases family 25 AS86_6879 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AS86_6879 PF10135 Rod binding protein AS86_6895 PF01726 LexA DNA binding domain AS86_6895 PF00717 Peptidase S24-like AS86_69 PF00589 Phage integrase family AS86_690 PF13419 Haloacid dehalogenase-like hydrolase AS86_6905 PF01381 Helix-turn-helix AS86_6907 PF01076 Plasmid recombination enzyme AS86_6911 PF01076 Plasmid recombination enzyme AS86_6912 PF12802 MarR family AS86_695 PF00005 ABC transporter AS86_7 PF01782 RimM N-terminal domain AS86_7 PF05239 PRC-barrel domain AS86_70 PF00313 'Cold-shock' DNA-binding domain AS86_701 PF02887 Pyruvate kinase, alpha/beta domain AS86_701 PF00391 PEP-utilising enzyme, mobile domain AS86_701 PF00224 Pyruvate kinase, barrel domain AS86_703 PF00881 Nitroreductase family AS86_704 PF01638 HxlR-like helix-turn-helix AS86_707 PF13393 Histidyl-tRNA synthetase AS86_707 PF03129 Anticodon binding domain AS86_708 PF04073 Aminoacyl-tRNA editing domain AS86_709 PF01048 Phosphorylase superfamily AS86_71 PF02915 Rubrerythrin AS86_711 PF04231 Endonuclease I AS86_712 PF03606 C4-dicarboxylate anaerobic carrier AS86_713 PF03737 Aldolase/RraA AS86_717 PF00005 ABC transporter AS86_719 PF14256 YwiC-like protein AS86_723 PF02525 Flavodoxin-like fold AS86_725 PF02667 Short chain fatty acid transporter AS86_728 PF07690 Major Facilitator Superfamily AS86_729 PF01047 MarR family AS86_730 PF12697 Alpha/beta hydrolase family AS86_732 PF07690 Major Facilitator Superfamily AS86_733 PF14044 NETI protein AS86_734 PF09587 Bacterial capsule synthesis protein PGA_cap AS86_735 PF02557 D-alanyl-D-alanine carboxypeptidase AS86_740 PF14449 Pre-toxin TG AS86_740 PF04740 LXG domain of WXG superfamily AS86_751 PF09346 SMI1 / KNR4 family (SUKH-1) AS86_762 PF07690 Major Facilitator Superfamily AS86_763 PF00440 Bacterial regulatory proteins, tetR family AS86_763 PF08361 MAATS-type transcriptional repressor, C-terminal region AS86_765 PF01471 Putative peptidoglycan binding domain AS86_765 PF01476 LysM domain AS86_765 PF01510 N-acetylmuramoyl-L-alanine amidase AS86_767 PF01804 Penicillin amidase AS86_768 PF12833 Helix-turn-helix domain AS86_768 PF01497 Periplasmic binding protein AS86_769 PF07883 Cupin domain AS86_772 PF00266 Aminotransferase class-V AS86_773 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS86_773 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS86_773 PF01842 ACT domain AS86_779 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS86_779 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AS86_780 PF04299 Putative FMN-binding domain AS86_781 PF00583 Acetyltransferase (GNAT) family AS86_782 PF01047 MarR family AS86_784 PF00072 Response regulator receiver domain AS86_784 PF00486 Transcriptional regulatory protein, C terminal AS86_785 PF00672 HAMP domain AS86_785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_785 PF00512 His Kinase A (phospho-acceptor) domain AS86_789 PF02687 FtsX-like permease family AS86_790 PF00005 ABC transporter AS86_793 PF04072 Leucine carboxyl methyltransferase AS86_797 PF00291 Pyridoxal-phosphate dependent enzyme AS86_799 PF07690 Major Facilitator Superfamily AS86_8 PF01746 tRNA (Guanine-1)-methyltransferase AS86_800 PF00067 Cytochrome P450 AS86_800 PF00175 Oxidoreductase NAD-binding domain AS86_800 PF00667 FAD binding domain AS86_800 PF00258 Flavodoxin AS86_804 PF00486 Transcriptional regulatory protein, C terminal AS86_804 PF00072 Response regulator receiver domain AS86_805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_805 PF00512 His Kinase A (phospho-acceptor) domain AS86_806 PF00005 ABC transporter AS86_808 PF08031 Berberine and berberine like AS86_808 PF01565 FAD binding domain AS86_809 PF00196 Bacterial regulatory proteins, luxR family AS86_809 PF00072 Response regulator receiver domain AS86_815 PF00672 HAMP domain AS86_815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_815 PF18698 Histidine kinase sensor domain AS86_815 PF00512 His Kinase A (phospho-acceptor) domain AS86_816 PF00072 Response regulator receiver domain AS86_816 PF00486 Transcriptional regulatory protein, C terminal AS86_819 PF00144 Beta-lactamase AS86_821 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_824 PF01037 Lrp/AsnC ligand binding domain AS86_826 PF18665 Tetracyclin repressor-like, C-terminal domain AS86_826 PF00440 Bacterial regulatory proteins, tetR family AS86_827 PF00550 Phosphopantetheine attachment site AS86_827 PF07993 Male sterility protein AS86_829 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AS86_830 PF01609 Transposase DDE domain AS86_831 PF01381 Helix-turn-helix AS86_835 PF01609 Transposase DDE domain AS86_838 PF07690 Major Facilitator Superfamily AS86_839 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_839 PF03466 LysR substrate binding domain AS86_841 PF01022 Bacterial regulatory protein, arsR family AS86_842 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS86_843 PF01758 Sodium Bile acid symporter family AS86_844 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS86_847 PF00005 ABC transporter AS86_848 PF00950 ABC 3 transport family AS86_849 PF01297 Zinc-uptake complex component A periplasmic AS86_850 PF01040 UbiA prenyltransferase family AS86_852 PF01522 Polysaccharide deacetylase AS86_853 PF10057 Uncharacterized conserved protein (DUF2294) AS86_854 PF00361 Proton-conducting membrane transporter AS86_854 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AS86_855 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AS86_857 PF03441 FAD binding domain of DNA photolyase AS86_857 PF00875 DNA photolyase AS86_858 PF03073 TspO/MBR family AS86_861 PF13026 Protein of unknown function (DUF3887) AS86_861 PF12146 Serine aminopeptidase, S33 AS86_865 PF01544 CorA-like Mg2+ transporter protein AS86_866 PF01047 MarR family AS86_867 PF03466 LysR substrate binding domain AS86_867 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS86_868 PF01979 Amidohydrolase family AS86_871 PF00857 Isochorismatase family AS86_874 PF00149 Calcineurin-like phosphoesterase AS86_874 PF02872 5'-nucleotidase, C-terminal domain AS86_874 PF17936 Bacterial Ig domain AS86_876 PF00144 Beta-lactamase AS86_877 PF00067 Cytochrome P450 AS86_879 PF01235 Sodium:alanine symporter family AS86_881 PF04960 Glutaminase AS86_882 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_883 PF00072 Response regulator receiver domain AS86_883 PF08664 YcbB domain AS86_884 PF03323 Bacillus/Clostridium GerA spore germination protein AS86_885 PF03845 Spore germination protein AS86_886 PF05504 Spore germination B3/ GerAC like, C-terminal AS86_887 PF03807 NADP oxidoreductase coenzyme F420-dependent AS86_887 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS86_888 PF13520 Amino acid permease AS86_889 PF02151 UvrB/uvrC motif AS86_889 PF08459 UvrC Helix-hairpin-helix N-terminal AS86_889 PF01541 GIY-YIG catalytic domain AS86_889 PF12826 Helix-hairpin-helix motif AS86_890 PF17853 GGDEF-like domain AS86_890 PF12833 Helix-turn-helix domain AS86_893 PF05791 Bacillus haemolytic enterotoxin (HBL) AS86_894 PF05791 Bacillus haemolytic enterotoxin (HBL) AS86_895 PF00512 His Kinase A (phospho-acceptor) domain AS86_895 PF00989 PAS fold AS86_895 PF13188 PAS domain AS86_895 PF13426 PAS domain AS86_895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_896 PF03323 Bacillus/Clostridium GerA spore germination protein AS86_897 PF03845 Spore germination protein AS86_898 PF05504 Spore germination B3/ GerAC like, C-terminal AS86_899 PF01381 Helix-turn-helix AS86_9 PF01245 Ribosomal protein L19 AS86_900 PF17763 Glutaminase/Asparaginase C-terminal domain AS86_900 PF00710 Asparaginase, N-terminal AS86_901 PF17763 Glutaminase/Asparaginase C-terminal domain AS86_901 PF00710 Asparaginase, N-terminal AS86_902 PF10415 Fumarase C C-terminus AS86_902 PF00206 Lyase AS86_904 PF13823 Alcohol dehydrogenase GroES-associated AS86_904 PF08240 Alcohol dehydrogenase GroES-like domain AS86_904 PF00107 Zinc-binding dehydrogenase AS86_905 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS86_906 PF11553 Protein of unknown function (DUF3231) AS86_907 PF10710 Protein of unknown function (DUF2512) AS86_908 PF00753 Metallo-beta-lactamase superfamily AS86_909 PF00391 PEP-utilising enzyme, mobile domain AS86_909 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AS86_910 PF00440 Bacterial regulatory proteins, tetR family AS86_913 PF02915 Rubrerythrin AS86_914 PF10903 Protein of unknown function (DUF2691) AS86_920 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AS86_920 PF02770 Acyl-CoA dehydrogenase, middle domain AS86_920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS86_923 PF03932 CutC family AS86_924 PF10502 Signal peptidase, peptidase S26 AS86_925 PF09339 IclR helix-turn-helix domain AS86_925 PF01614 Bacterial transcriptional regulator AS86_926 PF02682 Carboxyltransferase domain, subdomain C and D AS86_927 PF02626 Carboxyltransferase domain, subdomain A and B AS86_928 PF03746 LamB/YcsF family AS86_931 PF01470 Pyroglutamyl peptidase AS86_932 PF02146 Sir2 family AS86_934 PF10502 Signal peptidase, peptidase S26 AS86_935 PF04989 Cephalosporin hydroxylase AS86_936 PF00293 NUDIX domain AS86_938 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS86_938 PF18698 Histidine kinase sensor domain AS86_938 PF00989 PAS fold AS86_938 PF00672 HAMP domain AS86_938 PF00512 His Kinase A (phospho-acceptor) domain AS86_941 PF02559 CarD-like/TRCF domain AS86_944 PF10842 Protein of unknown function (DUF2642) AS86_948 PF00067 Cytochrome P450 AS86_951 PF00324 Amino acid permease AS86_953 PF01925 Sulfite exporter TauE/SafE AS86_96 PF04740 LXG domain of WXG superfamily AS86_96 PF14436 Bacterial EndoU nuclease AS86_960 PF13031 Protein of unknown function (DUF3892) AS86_961 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AS86_962 PF00392 Bacterial regulatory proteins, gntR family AS86_962 PF00155 Aminotransferase class I and II AS86_963 PF00892 EamA-like transporter family AS86_964 PF00293 NUDIX domain AS86_964 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AS86_964 PF09297 NADH pyrophosphatase zinc ribbon domain AS86_966 PF00583 Acetyltransferase (GNAT) family AS86_967 PF12833 Helix-turn-helix domain AS86_97 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS86_97 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS86_972 PF00005 ABC transporter AS86_973 PF16363 GDP-mannose 4,6 dehydratase AS86_974 PF05406 WGR domain AS86_975 PF00293 NUDIX domain AS86_977 PF03764 Elongation factor G, domain IV AS86_977 PF00679 Elongation factor G C-terminus AS86_977 PF14492 Elongation Factor G, domain II AS86_977 PF00009 Elongation factor Tu GTP binding domain AS86_978 PF01047 MarR family AS86_979 PF00881 Nitroreductase family AS86_98 PF13840 ACT domain AS86_98 PF00696 Amino acid kinase family AS86_983 PF04740 LXG domain of WXG superfamily AS86_983 PF14436 Bacterial EndoU nuclease AS86_984 PF15652 HNH/Endo VII superfamily toxin with a SHH signature AS86_984 PF04740 LXG domain of WXG superfamily AS86_985 PF09346 SMI1 / KNR4 family (SUKH-1) AS86_987 PF00144 Beta-lactamase AS86_988 PF01979 Amidohydrolase family AS86_988 PF13382 Adenine deaminase C-terminal domain AS86_99 PF00701 Dihydrodipicolinate synthetase family AS86_990 PF06628 Catalase-related immune-responsive AS86_990 PF00199 Catalase AS86_991 PF00202 Aminotransferase class-III AS86_992 PF07690 Major Facilitator Superfamily AS86_996 PF17863 AAA lid domain AS86_996 PF07726 ATPase family associated with various cellular activities (AAA)