AS86_1 SM00968 SMC proteins Flexible Hinge Domain AS86_100 SM00849 Metallo-beta-lactamase superfamily AS86_1006 SM00530 Helix-turn-helix XRE-family like proteins AS86_1008 SM00098 Alkaline phosphatase homologues AS86_1016 SM00346 helix_turn_helix isocitrate lyase regulation AS86_1019 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AS86_1022 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_1027 SM01133 AS86_1027 AS86_103 SM00382 ATPases associated with a variety of cellular activities AS86_103 SM00843 AS86_103 AS86_1031 SM00382 ATPases associated with a variety of cellular activities AS86_104 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_104 SM00866 AS86_104 AS86_1041 SM00287 Bacterial SH3 domain homologues AS86_1048 SM00830 Chorismate mutase type II AS86_1056 SM00382 ATPases associated with a variety of cellular activities AS86_106 SM00382 ATPases associated with a variety of cellular activities AS86_1064 SM00849 Metallo-beta-lactamase superfamily AS86_1076 SM00028 Tetratricopeptide repeats AS86_1079 SM00382 ATPases associated with a variety of cellular activities AS86_1080 SM00062 Bacterial periplasmic substrate-binding proteins AS86_1128 SM00448 cheY-homologous receiver domain AS86_1128 SM00862 Transcriptional regulatory protein, C terminal AS86_1129 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_1129 SM00387 Histidine kinase-like ATPases AS86_1129 SM00388 His Kinase A (phosphoacceptor) domain AS86_1131 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AS86_1136 SM00248 ankyrin repeats AS86_1141 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS86_1155 SM00091 PAS domain AS86_1155 SM00382 ATPases associated with a variety of cellular activities AS86_1159 SM01130 AS86_1159 AS86_116 SM00852 Probable molybdopterin binding domain AS86_1163 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_1166 SM01131 AS86_1166 AS86_117 SM00382 ATPases associated with a variety of cellular activities AS86_1170 SM00646 AS86_1170 AS86_1176 SM00341 Helicase and RNase D C-terminal AS86_1176 SM00487 DEAD-like helicases superfamily AS86_1176 SM00490 helicase superfamily c-terminal domain AS86_1176 SM00956 AS86_1176 AS86_118 SM00322 K homology RNA-binding domain AS86_118 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_1197 SM00060 Fibronectin type 3 domain AS86_1197 SM00495 Chitin-binding domain type 3 AS86_1207 SM00116 Domain in cystathionine beta-synthase and other proteins. AS86_1207 SM00382 ATPases associated with a variety of cellular activities AS86_1220 SM00861 Transketolase, pyrimidine binding domain AS86_1228 SM00420 helix_turn_helix, Deoxyribose operon repressor AS86_1228 SM01134 AS86_1228 AS86_1232 SM00382 ATPases associated with a variety of cellular activities AS86_124 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_1255 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_1259 SM00871 Bacterial transcription activator, effector binding domain AS86_1263 SM00642 Alpha-amylase domain AS86_127 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS86_127 SM00534 ATPase domain of DNA mismatch repair MUTS family AS86_1270 SM00382 ATPases associated with a variety of cellular activities AS86_1273 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_1273 SM00387 Histidine kinase-like ATPases AS86_1273 SM00388 His Kinase A (phosphoacceptor) domain AS86_1274 SM00448 cheY-homologous receiver domain AS86_1274 SM00862 Transcriptional regulatory protein, C terminal AS86_128 SM00853 MutL C terminal dimerisation domain AS86_128 SM01340 AS86_128 AS86_1292 SM00465 GIY-YIG type nucleases (URI domain) AS86_1311 SM00480 DNA polymerase III beta subunit AS86_1324 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_1327 SM00287 Bacterial SH3 domain homologues AS86_133 SM00257 Lysin motif AS86_1334 SM00422 helix_turn_helix, mercury resistance AS86_1342 SM00740 AS86_1342 AS86_1343 SM00014 Acid phosphatase homologues AS86_1344 SM00829 Enoylreductase AS86_135 SM00148 Phospholipase C, catalytic domain (part); domain X AS86_1350 SM00342 helix_turn_helix, arabinose operon control protein AS86_136 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_136 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_1363 SM00387 Histidine kinase-like ATPases AS86_1363 SM00388 His Kinase A (phosphoacceptor) domain AS86_1366 SM00382 ATPases associated with a variety of cellular activities AS86_1369 SM00507 HNH nucleases AS86_1370 SM00530 Helix-turn-helix XRE-family like proteins AS86_1376 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_138 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_1388 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_1393 SM00829 Enoylreductase AS86_14 SM00881 CoA binding domain AS86_1405 SM01058 CarD-like/TRCF domain AS86_1423 SM00091 PAS domain AS86_1423 SM00387 Histidine kinase-like ATPases AS86_1423 SM00388 His Kinase A (phosphoacceptor) domain AS86_1443 SM01209 AS86_1443 AS86_1444 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_1450 SM00382 ATPases associated with a variety of cellular activities AS86_1453 SM00382 ATPases associated with a variety of cellular activities AS86_1456 SM00387 Histidine kinase-like ATPases AS86_1457 SM00448 cheY-homologous receiver domain AS86_1457 SM00862 Transcriptional regulatory protein, C terminal AS86_147 SM00052 Putative diguanylate phosphodiesterase AS86_147 SM00091 PAS domain AS86_147 SM00267 diguanylate cyclase AS86_1472 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_1475 SM00342 helix_turn_helix, arabinose operon control protein AS86_1483 SM00422 helix_turn_helix, mercury resistance AS86_1483 SM00871 Bacterial transcription activator, effector binding domain AS86_1484 SM00382 ATPases associated with a variety of cellular activities AS86_1490 SM00342 helix_turn_helix, arabinose operon control protein AS86_1499 SM00448 cheY-homologous receiver domain AS86_1499 SM00862 Transcriptional regulatory protein, C terminal AS86_1500 SM00387 Histidine kinase-like ATPases AS86_1500 SM00388 His Kinase A (phosphoacceptor) domain AS86_1512 SM00878 Biotin carboxylase C-terminal domain AS86_153 SM00478 endonuclease III AS86_1539 SM00530 Helix-turn-helix XRE-family like proteins AS86_1540 SM00047 Lysozyme subfamily 2 AS86_1543 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_155 SM00342 helix_turn_helix, arabinose operon control protein AS86_1556 SM00984 UDP binding domain AS86_1571 SM00823 Phosphopantetheine attachment site AS86_1572 SM00823 Phosphopantetheine attachment site AS86_1577 SM00936 Penicillin-binding protein 5, C-terminal domain AS86_1581 SM00966 SpoVT / AbrB like domain AS86_1584 SM00421 helix_turn_helix, Lux Regulon AS86_1592 SM00855 Phosphoglycerate mutase family AS86_1593 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_1598 SM00487 DEAD-like helicases superfamily AS86_1598 SM00490 helicase superfamily c-terminal domain AS86_16 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS86_16 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS86_16 SM00493 AS86_16 AS86_160 SM00382 ATPases associated with a variety of cellular activities AS86_1600 SM00849 Metallo-beta-lactamase superfamily AS86_1603 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_1606 SM01207 AS86_1606 AS86_1620 SM00835 Cupin AS86_1624 SM00530 Helix-turn-helix XRE-family like proteins AS86_163 SM00421 helix_turn_helix, Lux Regulon AS86_1630 SM00382 ATPases associated with a variety of cellular activities AS86_1631 SM00382 ATPases associated with a variety of cellular activities AS86_1637 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS86_1642 SM00357 Cold shock protein domain AS86_1649 SM00530 Helix-turn-helix XRE-family like proteins AS86_1654 SM01059 Chloramphenicol acetyltransferase AS86_1658 SM00849 Metallo-beta-lactamase superfamily AS86_1662 SM00100 Cyclic nucleotide-monophosphate binding domain AS86_1667 SM00849 Metallo-beta-lactamase superfamily AS86_1670 SM00382 ATPases associated with a variety of cellular activities AS86_1671 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS86_1672 SM00363 S4 RNA-binding domain AS86_1680 SM00411 bacterial (prokaryotic) histone like domain AS86_1684 SM00923 MbtH-like protein AS86_1685 SM00823 Phosphopantetheine attachment site AS86_1685 SM00824 Thioesterase AS86_169 SM00411 bacterial (prokaryotic) histone like domain AS86_1692 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_1729 SM00014 Acid phosphatase homologues AS86_173 SM00636 AS86_173 AS86_1732 SM00219 Tyrosine kinase, catalytic domain AS86_1740 SM00382 ATPases associated with a variety of cellular activities AS86_1743 SM00882 Coenzyme A transferase AS86_1744 SM00882 Coenzyme A transferase AS86_1747 SM00387 Histidine kinase-like ATPases AS86_1747 SM00388 His Kinase A (phosphoacceptor) domain AS86_1750 SM01091 Transporter associated domain AS86_1758 SM00382 ATPases associated with a variety of cellular activities AS86_1765 SM01350 AS86_1765 AS86_1771 SM00829 Enoylreductase AS86_1774 SM00421 helix_turn_helix, Lux Regulon AS86_1774 SM00448 cheY-homologous receiver domain AS86_1775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS86_1783 SM00646 AS86_1783 AS86_179 SM00420 helix_turn_helix, Deoxyribose operon repressor AS86_179 SM01134 AS86_179 AS86_1795 SM00563 Phosphate acyltransferases AS86_1806 SM00382 ATPases associated with a variety of cellular activities AS86_1809 SM00530 Helix-turn-helix XRE-family like proteins AS86_182 SM00287 Bacterial SH3 domain homologues AS86_1824 SM00028 Tetratricopeptide repeats AS86_1828 SM00836 DALR anticodon binding domain AS86_1828 SM01016 Arginyl tRNA synthetase N terminal dom AS86_1832 SM00567 E-Z type HEAT repeats AS86_1832 SM00932 Scaffold protein Nfu/NifU N terminal AS86_1837 SM00382 ATPases associated with a variety of cellular activities AS86_1838 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_1841 SM00028 Tetratricopeptide repeats AS86_1851 SM00894 Excalibur calcium-binding domain AS86_1863 SM00852 Probable molybdopterin binding domain AS86_1865 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_1866 SM00100 Cyclic nucleotide-monophosphate binding domain AS86_1866 SM00419 helix_turn_helix, cAMP Regulatory protein AS86_1870 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS86_1873 SM00460 Transglutaminase/protease-like homologues AS86_1876 SM00849 Metallo-beta-lactamase superfamily AS86_188 SM00382 ATPases associated with a variety of cellular activities AS86_1881 SM00829 Enoylreductase AS86_1885 SM00487 DEAD-like helicases superfamily AS86_1885 SM00490 helicase superfamily c-terminal domain AS86_193 SM00422 helix_turn_helix, mercury resistance AS86_1934 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_194 SM01230 AS86_194 AS86_1940 SM01005 Alanine racemase, C-terminal domain AS86_1943 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_1945 SM00855 Phosphoglycerate mutase family AS86_1947 SM00244 prohibitin homologues AS86_195 SM00530 Helix-turn-helix XRE-family like proteins AS86_1963 SM01091 Transporter associated domain AS86_1968 SM00155 Phospholipase D. Active site motifs. AS86_1978 SM00855 Phosphoglycerate mutase family AS86_1989 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS86_2 SM00382 ATPases associated with a variety of cellular activities AS86_2 SM00962 SRP54-type protein, GTPase domain AS86_2 SM00963 SRP54-type protein, helical bundle domain AS86_20 SM00382 ATPases associated with a variety of cellular activities AS86_20 SM01086 C-terminal, D2-small domain, of ClpB protein AS86_2001 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_2001 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_2008 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_2010 SM00966 SpoVT / AbrB like domain AS86_2015 SM00460 Transglutaminase/protease-like homologues AS86_2020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_2048 SM00387 Histidine kinase-like ATPases AS86_2048 SM00388 His Kinase A (phosphoacceptor) domain AS86_2049 SM00448 cheY-homologous receiver domain AS86_2049 SM00862 Transcriptional regulatory protein, C terminal AS86_2050 SM00382 ATPases associated with a variety of cellular activities AS86_2052 SM00287 Bacterial SH3 domain homologues AS86_2065 SM00382 ATPases associated with a variety of cellular activities AS86_2066 SM00382 ATPases associated with a variety of cellular activities AS86_2070 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_2078 SM00382 ATPases associated with a variety of cellular activities AS86_2079 SM00382 ATPases associated with a variety of cellular activities AS86_2081 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS86_209 SM00857 Resolvase, N terminal domain AS86_2099 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS86_2099 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS86_2099 SM00493 AS86_2099 AS86_2104 SM01011 Aminopeptidase P, N-terminal domain AS86_2115 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AS86_2117 SM01133 AS86_2117 AS86_212 SM00062 Bacterial periplasmic substrate-binding proteins AS86_213 SM00382 ATPases associated with a variety of cellular activities AS86_2134 SM00450 Rhodanese Homology Domain AS86_2137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_2137 SM00387 Histidine kinase-like ATPases AS86_2137 SM00388 His Kinase A (phosphoacceptor) domain AS86_2138 SM00448 cheY-homologous receiver domain AS86_2138 SM00862 Transcriptional regulatory protein, C terminal AS86_2145 SM00850 LytTr DNA-binding domain AS86_2152 SM00854 Bacterial capsule synthesis protein PGA_cap AS86_216 SM00861 Transketolase, pyrimidine binding domain AS86_219 SM00382 ATPases associated with a variety of cellular activities AS86_2190 SM00487 DEAD-like helicases superfamily AS86_2190 SM00490 helicase superfamily c-terminal domain AS86_2191 SM00448 cheY-homologous receiver domain AS86_2192 SM00387 Histidine kinase-like ATPases AS86_2193 SM00919 Malic enzyme, NAD binding domain AS86_2193 SM01274 AS86_2193 AS86_2197 SM00155 Phospholipase D. Active site motifs. AS86_220 SM00382 ATPases associated with a variety of cellular activities AS86_2200 SM00382 ATPases associated with a variety of cellular activities AS86_2202 SM00421 helix_turn_helix, Lux Regulon AS86_2202 SM00448 cheY-homologous receiver domain AS86_2209 SM00530 Helix-turn-helix XRE-family like proteins AS86_221 SM00287 Bacterial SH3 domain homologues AS86_221 SM00641 Glycosyl hydrolases family 25 AS86_2210 SM00028 Tetratricopeptide repeats AS86_2225 SM00422 helix_turn_helix, mercury resistance AS86_2230 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS86_2239 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_2243 SM00855 Phosphoglycerate mutase family AS86_2249 SM00849 Metallo-beta-lactamase superfamily AS86_2249 SM01027 Beta-Casp domain AS86_2252 SM00382 ATPases associated with a variety of cellular activities AS86_2256 SM00530 Helix-turn-helix XRE-family like proteins AS86_2265 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS86_2268 SM00382 ATPases associated with a variety of cellular activities AS86_2268 SM00962 SRP54-type protein, GTPase domain AS86_2285 SM00260 Two component signalling adaptor domain AS86_2285 SM00448 cheY-homologous receiver domain AS86_2292 SM00382 ATPases associated with a variety of cellular activities AS86_2307 SM00138 Methyltransferase, chemotaxis proteins AS86_2311 SM00073 Histidine Phosphotransfer domain AS86_2311 SM00260 Two component signalling adaptor domain AS86_2311 SM00387 Histidine kinase-like ATPases AS86_2311 SM01231 AS86_2311 AS86_2312 SM00448 cheY-homologous receiver domain AS86_2326 SM00422 helix_turn_helix, mercury resistance AS86_2326 SM00871 Bacterial transcription activator, effector binding domain AS86_2338 SM00357 Cold shock protein domain AS86_234 SM00382 ATPases associated with a variety of cellular activities AS86_2360 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS86_2360 SM00475 5'-3' exonuclease AS86_2366 SM00450 Rhodanese Homology Domain AS86_2378 SM00491 AS86_2378 AS86_2380 SM00981 AS86_2380 AS86_2391 SM00060 Fibronectin type 3 domain AS86_2393 SM00478 endonuclease III AS86_2398 SM00479 AS86_2398 AS86_2398 SM00487 DEAD-like helicases superfamily AS86_2398 SM00491 AS86_2398 AS86_2407 SM00851 MGS-like domain AS86_2411 SM00986 Uracil DNA glycosylase superfamily AS86_2411 SM00987 UreE urease accessory protein, C-terminal domain AS86_2420 SM00914 AS86_2420 AS86_2421 SM00028 Tetratricopeptide repeats AS86_2425 SM00562 AS86_2425 AS86_2430 SM00411 bacterial (prokaryotic) histone like domain AS86_2441 SM01240 AS86_2441 AS86_2442 SM00316 Ribosomal protein S1-like RNA-binding domain AS86_2445 SM00870 AS86_2445 AS86_2447 SM00644 AS86_2447 AS86_2450 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS86_2452 SM00422 helix_turn_helix, mercury resistance AS86_2454 SM00257 Lysin motif AS86_2456 SM00487 DEAD-like helicases superfamily AS86_2456 SM00490 helicase superfamily c-terminal domain AS86_2461 SM00257 Lysin motif AS86_2463 SM00091 PAS domain AS86_2463 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_2463 SM00387 Histidine kinase-like ATPases AS86_2463 SM00388 His Kinase A (phosphoacceptor) domain AS86_2464 SM00448 cheY-homologous receiver domain AS86_2464 SM00862 Transcriptional regulatory protein, C terminal AS86_2468 SM00363 S4 RNA-binding domain AS86_2478 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_2478 SM00387 Histidine kinase-like ATPases AS86_2478 SM00388 His Kinase A (phosphoacceptor) domain AS86_2482 SM00091 PAS domain AS86_2482 SM00387 Histidine kinase-like ATPases AS86_2482 SM00388 His Kinase A (phosphoacceptor) domain AS86_250 SM01058 CarD-like/TRCF domain AS86_2500 SM00421 helix_turn_helix, Lux Regulon AS86_2500 SM00448 cheY-homologous receiver domain AS86_2501 SM00387 Histidine kinase-like ATPases AS86_2538 SM01329 AS86_2538 AS86_2539 SM00917 LeuA allosteric (dimerisation) domain AS86_2552 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_257 SM00091 PAS domain AS86_257 SM00387 Histidine kinase-like ATPases AS86_257 SM00388 His Kinase A (phosphoacceptor) domain AS86_2576 SM00344 helix_turn_helix ASNC type AS86_2580 SM00382 ATPases associated with a variety of cellular activities AS86_2582 SM00382 ATPases associated with a variety of cellular activities AS86_2583 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_2597 SM00387 Histidine kinase-like ATPases AS86_2597 SM00388 His Kinase A (phosphoacceptor) domain AS86_260 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS86_2601 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_2602 SM00387 Histidine kinase-like ATPases AS86_2602 SM00388 His Kinase A (phosphoacceptor) domain AS86_2606 SM01007 Class II Aldolase and Adducin N-terminal domain AS86_2607 SM00365 Leucine-rich repeat, SDS22-like subfamily AS86_2607 SM00369 Leucine-rich repeats, typical (most populated) subfamily AS86_2607 SM00725 NEAr Transporter domain AS86_2609 SM00420 helix_turn_helix, Deoxyribose operon repressor AS86_2609 SM01134 AS86_2609 AS86_261 SM00644 AS86_261 AS86_261 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AS86_2614 SM00382 ATPases associated with a variety of cellular activities AS86_2621 SM00822 AS86_2621 AS86_2635 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_2635 SM00895 AS86_2635 AS86_2636 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_2636 SM00387 Histidine kinase-like ATPases AS86_2636 SM00388 His Kinase A (phosphoacceptor) domain AS86_2637 SM00448 cheY-homologous receiver domain AS86_2637 SM00862 Transcriptional regulatory protein, C terminal AS86_2647 SM00014 Acid phosphatase homologues AS86_2651 SM00382 ATPases associated with a variety of cellular activities AS86_2655 SM00530 Helix-turn-helix XRE-family like proteins AS86_266 SM00530 Helix-turn-helix XRE-family like proteins AS86_2669 SM00382 ATPases associated with a variety of cellular activities AS86_2674 SM00530 Helix-turn-helix XRE-family like proteins AS86_2675 SM00861 Transketolase, pyrimidine binding domain AS86_2684 SM01324 AS86_2684 AS86_2698 SM00635 Bacterial Ig-like domain 2 AS86_2729 SM00954 Region found in RelA / SpoT proteins AS86_273 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS86_2731 SM01118 AS86_2731 AS86_2736 SM00155 Phospholipase D. Active site motifs. AS86_2743 SM00382 ATPases associated with a variety of cellular activities AS86_2744 SM00382 ATPases associated with a variety of cellular activities AS86_2752 SM00825 Beta-ketoacyl synthase AS86_2758 SM00382 ATPases associated with a variety of cellular activities AS86_2758 SM01086 C-terminal, D2-small domain, of ClpB protein AS86_2776 SM00316 Ribosomal protein S1-like RNA-binding domain AS86_2778 SM00530 Helix-turn-helix XRE-family like proteins AS86_2779 SM00642 Alpha-amylase domain AS86_2781 SM01060 AS86_2781 AS86_2804 SM00357 Cold shock protein domain AS86_2812 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_2812 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_2817 SM00448 cheY-homologous receiver domain AS86_2817 SM00862 Transcriptional regulatory protein, C terminal AS86_2818 SM00387 Histidine kinase-like ATPases AS86_2818 SM00388 His Kinase A (phosphoacceptor) domain AS86_282 SM00382 ATPases associated with a variety of cellular activities AS86_2820 SM00342 helix_turn_helix, arabinose operon control protein AS86_2820 SM00871 Bacterial transcription activator, effector binding domain AS86_2823 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_2841 SM00849 Metallo-beta-lactamase superfamily AS86_2843 SM00354 helix_turn _helix lactose operon repressor AS86_285 SM00479 AS86_285 AS86_2874 SM00382 ATPases associated with a variety of cellular activities AS86_2877 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_288 SM00257 Lysin motif AS86_288 SM00636 AS86_288 AS86_2894 SM00530 Helix-turn-helix XRE-family like proteins AS86_2895 SM00835 Cupin AS86_29 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS86_2902 SM00028 Tetratricopeptide repeats AS86_2907 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_291 SM01207 AS86_291 AS86_2914 SM00829 Enoylreductase AS86_2922 SM00387 Histidine kinase-like ATPases AS86_2922 SM00388 His Kinase A (phosphoacceptor) domain AS86_2922 SM00448 cheY-homologous receiver domain AS86_2923 SM00138 Methyltransferase, chemotaxis proteins AS86_2924 SM00331 Sigma factor PP2C-like phosphatases AS86_2924 SM00448 cheY-homologous receiver domain AS86_2939 SM00460 Transglutaminase/protease-like homologues AS86_294 SM00448 cheY-homologous receiver domain AS86_294 SM00862 Transcriptional regulatory protein, C terminal AS86_2942 SM00530 Helix-turn-helix XRE-family like proteins AS86_2948 SM00382 ATPases associated with a variety of cellular activities AS86_295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS86_2952 SM01120 AS86_2952 AS86_2956 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_296 SM00881 CoA binding domain AS86_2960 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_297 SM00387 Histidine kinase-like ATPases AS86_297 SM00433 TopoisomeraseII AS86_2979 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_298 SM00434 DNA Topoisomerase IV AS86_2981 SM00894 Excalibur calcium-binding domain AS86_3003 SM00448 cheY-homologous receiver domain AS86_3004 SM00091 PAS domain AS86_3004 SM00387 Histidine kinase-like ATPases AS86_301 SM00420 helix_turn_helix, Deoxyribose operon repressor AS86_3011 SM00860 SMI1 / KNR4 family AS86_3012 SM00860 SMI1 / KNR4 family AS86_3014 SM00860 SMI1 / KNR4 family AS86_303 SM00382 ATPases associated with a variety of cellular activities AS86_3031 SM00998 Adenylosuccinate lyase C-terminus AS86_3032 SM00823 Phosphopantetheine attachment site AS86_3036 SM00849 Metallo-beta-lactamase superfamily AS86_3038 SM00382 ATPases associated with a variety of cellular activities AS86_3039 SM00382 ATPases associated with a variety of cellular activities AS86_3047 SM00646 AS86_3047 AS86_3054 SM00047 Lysozyme subfamily 2 AS86_3060 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_3061 SM00644 AS86_3061 AS86_3076 SM00382 ATPases associated with a variety of cellular activities AS86_3078 SM00062 Bacterial periplasmic substrate-binding proteins AS86_3078 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS86_3079 SM00382 ATPases associated with a variety of cellular activities AS86_3080 SM00382 ATPases associated with a variety of cellular activities AS86_3084 SM01060 AS86_3084 AS86_3094 SM00422 helix_turn_helix, mercury resistance AS86_3097 SM00344 helix_turn_helix ASNC type AS86_31 SM00479 AS86_31 AS86_31 SM00481 DNA polymerase alpha chain like domain AS86_3117 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AS86_3128 SM00382 ATPases associated with a variety of cellular activities AS86_3130 SM00287 Bacterial SH3 domain homologues AS86_3141 SM00829 Enoylreductase AS86_3146 SM00450 Rhodanese Homology Domain AS86_3147 SM00450 Rhodanese Homology Domain AS86_3149 SM00450 Rhodanese Homology Domain AS86_3149 SM00849 Metallo-beta-lactamase superfamily AS86_3150 SM00450 Rhodanese Homology Domain AS86_3173 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_3190 SM00382 ATPases associated with a variety of cellular activities AS86_3192 SM00287 Bacterial SH3 domain homologues AS86_3195 SM00116 Domain in cystathionine beta-synthase and other proteins. AS86_3227 SM00899 AS86_3227 AS86_3246 SM00530 Helix-turn-helix XRE-family like proteins AS86_325 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS86_3257 SM00530 Helix-turn-helix XRE-family like proteins AS86_3259 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_3266 SM00770 Zinc dependent phospholipase C (alpha toxin) AS86_3268 SM00829 Enoylreductase AS86_327 SM00530 Helix-turn-helix XRE-family like proteins AS86_3276 SM00382 ATPases associated with a variety of cellular activities AS86_3279 SM00354 helix_turn _helix lactose operon repressor AS86_3281 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_3289 SM00448 cheY-homologous receiver domain AS86_3289 SM00862 Transcriptional regulatory protein, C terminal AS86_329 SM00530 Helix-turn-helix XRE-family like proteins AS86_3290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_3290 SM00387 Histidine kinase-like ATPases AS86_3290 SM00388 His Kinase A (phosphoacceptor) domain AS86_33 SM00316 Ribosomal protein S1-like RNA-binding domain AS86_33 SM00322 K homology RNA-binding domain AS86_330 SM00530 Helix-turn-helix XRE-family like proteins AS86_3300 SM00062 Bacterial periplasmic substrate-binding proteins AS86_3300 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS86_3301 SM00382 ATPases associated with a variety of cellular activities AS86_3308 SM00642 Alpha-amylase domain AS86_3310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_3310 SM00866 AS86_3310 AS86_3312 SM00052 Putative diguanylate phosphodiesterase AS86_3312 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS86_3312 SM00267 diguanylate cyclase AS86_3314 SM00155 Phospholipase D. Active site motifs. AS86_3315 SM00382 ATPases associated with a variety of cellular activities AS86_3316 SM00327 von Willebrand factor (vWF) type A domain AS86_3321 SM00382 ATPases associated with a variety of cellular activities AS86_3327 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_3330 SM01091 Transporter associated domain AS86_3340 SM00028 Tetratricopeptide repeats AS86_3340 SM00530 Helix-turn-helix XRE-family like proteins AS86_3343 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_3345 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS86_3345 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS86_3348 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS86_3348 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS86_3354 SM00448 cheY-homologous receiver domain AS86_3354 SM00862 Transcriptional regulatory protein, C terminal AS86_3355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_3355 SM00387 Histidine kinase-like ATPases AS86_3355 SM00388 His Kinase A (phosphoacceptor) domain AS86_3361 SM00919 Malic enzyme, NAD binding domain AS86_3361 SM01274 AS86_3361 AS86_3363 SM00448 cheY-homologous receiver domain AS86_3364 SM00387 Histidine kinase-like ATPases AS86_3365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_3365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_3368 SM00387 Histidine kinase-like ATPases AS86_3368 SM00388 His Kinase A (phosphoacceptor) domain AS86_3369 SM00448 cheY-homologous receiver domain AS86_3369 SM00862 Transcriptional regulatory protein, C terminal AS86_3374 SM00382 ATPases associated with a variety of cellular activities AS86_3377 SM00248 ankyrin repeats AS86_3381 SM00448 cheY-homologous receiver domain AS86_3382 SM00387 Histidine kinase-like ATPases AS86_3383 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_3383 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_3384 SM00244 prohibitin homologues AS86_3386 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AS86_3388 SM00365 Leucine-rich repeat, SDS22-like subfamily AS86_3388 SM00369 Leucine-rich repeats, typical (most populated) subfamily AS86_3388 SM00725 NEAr Transporter domain AS86_3390 SM00763 PrkA AAA domain AS86_3392 SM00052 Putative diguanylate phosphodiesterase AS86_3392 SM00091 PAS domain AS86_3392 SM00267 diguanylate cyclase AS86_3395 SM00567 E-Z type HEAT repeats AS86_3430 SM00382 ATPases associated with a variety of cellular activities AS86_3434 SM00382 ATPases associated with a variety of cellular activities AS86_3439 SM00478 endonuclease III AS86_3439 SM00525 AS86_3439 AS86_3455 SM00984 UDP binding domain AS86_3465 SM00530 Helix-turn-helix XRE-family like proteins AS86_3469 SM00382 ATPases associated with a variety of cellular activities AS86_3474 SM00478 endonuclease III AS86_3492 SM00226 Low molecular weight phosphatase family AS86_3494 SM00831 Cation transporter/ATPase, N-terminus AS86_350 SM01040 BRO family, N-terminal domain AS86_3503 SM00946 Prolyl-tRNA synthetase, C-terminal AS86_3507 SM00530 Helix-turn-helix XRE-family like proteins AS86_3514 SM00060 Fibronectin type 3 domain AS86_3514 SM00636 AS86_3514 AS86_3514 SM00637 AS86_3514 AS86_3515 SM00382 ATPases associated with a variety of cellular activities AS86_3516 SM00382 ATPases associated with a variety of cellular activities AS86_3521 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_3521 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_3525 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS86_3525 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS86_3525 SM00493 AS86_3525 AS86_3529 SM00642 Alpha-amylase domain AS86_3532 SM00100 Cyclic nucleotide-monophosphate binding domain AS86_3532 SM00419 helix_turn_helix, cAMP Regulatory protein AS86_3538 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_3538 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_3539 SM00382 ATPases associated with a variety of cellular activities AS86_3540 SM00062 Bacterial periplasmic substrate-binding proteins AS86_3540 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS86_3549 SM00387 Histidine kinase-like ATPases AS86_3549 SM00388 His Kinase A (phosphoacceptor) domain AS86_355 SM00857 Resolvase, N terminal domain AS86_3562 SM01007 Class II Aldolase and Adducin N-terminal domain AS86_3571 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS86_3586 SM00382 ATPases associated with a variety of cellular activities AS86_3589 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS86_3590 SM00845 GatB domain AS86_3594 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_3600 SM00382 ATPases associated with a variety of cellular activities AS86_3600 SM00930 AS86_3600 AS86_3605 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS86_3605 SM00292 breast cancer carboxy-terminal domain AS86_3605 SM00532 Ligase N family AS86_3609 SM00244 prohibitin homologues AS86_3611 SM01209 AS86_3611 AS86_3611 SM01210 AS86_3611 AS86_3612 SM00798 AICARFT/IMPCHase bienzyme AS86_3612 SM00851 MGS-like domain AS86_3617 SM01211 AS86_3617 AS86_3620 SM00998 Adenylosuccinate lyase C-terminus AS86_3622 SM01001 AIR carboxylase AS86_3633 SM00448 cheY-homologous receiver domain AS86_3633 SM00862 Transcriptional regulatory protein, C terminal AS86_3634 SM00387 Histidine kinase-like ATPases AS86_3634 SM00388 His Kinase A (phosphoacceptor) domain AS86_3635 SM00382 ATPases associated with a variety of cellular activities AS86_3639 SM01022 AS86_3639 AS86_3650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_3650 SM00387 Histidine kinase-like ATPases AS86_3650 SM00388 His Kinase A (phosphoacceptor) domain AS86_3651 SM00448 cheY-homologous receiver domain AS86_3651 SM00862 Transcriptional regulatory protein, C terminal AS86_3670 SM00860 SMI1 / KNR4 family AS86_3671 SM00530 Helix-turn-helix XRE-family like proteins AS86_3683 SM00530 Helix-turn-helix XRE-family like proteins AS86_3686 SM00883 Chaperonin 10 Kd subunit AS86_3689 SM00881 CoA binding domain AS86_3690 SM00382 ATPases associated with a variety of cellular activities AS86_3713 SM00731 SprT homologues. AS86_3714 SM00316 Ribosomal protein S1-like RNA-binding domain AS86_3714 SM00732 Likely ribonuclease with RNase H fold. AS86_3717 SM01005 Alanine racemase, C-terminal domain AS86_3722 SM00487 DEAD-like helicases superfamily AS86_3722 SM00490 helicase superfamily c-terminal domain AS86_3735 SM00382 ATPases associated with a variety of cellular activities AS86_3736 SM00382 ATPases associated with a variety of cellular activities AS86_3741 SM00382 ATPases associated with a variety of cellular activities AS86_375 SM00287 Bacterial SH3 domain homologues AS86_375 SM00644 AS86_375 AS86_3751 SM00354 helix_turn _helix lactose operon repressor AS86_3753 SM00563 Phosphate acyltransferases AS86_377 SM00530 Helix-turn-helix XRE-family like proteins AS86_3771 SM00382 ATPases associated with a variety of cellular activities AS86_3772 SM00382 ATPases associated with a variety of cellular activities AS86_3783 SM00829 Enoylreductase AS86_3785 SM00382 ATPases associated with a variety of cellular activities AS86_3785 SM00930 AS86_3785 AS86_3812 SM01251 AS86_3812 AS86_3815 SM00646 AS86_3815 AS86_3821 SM00382 ATPases associated with a variety of cellular activities AS86_3822 SM00382 ATPases associated with a variety of cellular activities AS86_3824 SM00662 RNA polymerases D AS86_3828 SM00316 Ribosomal protein S1-like RNA-binding domain AS86_383 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS86_3840 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AS86_3841 SM01374 AS86_3841 AS86_3845 SM00322 K homology RNA-binding domain AS86_3848 SM01382 AS86_3848 AS86_3848 SM01383 AS86_3848 AS86_3852 SM01403 AS86_3852 AS86_3854 SM00838 Elongation factor G C-terminus AS86_3854 SM00889 Elongation factor G, domain IV AS86_3858 SM00663 RNA polymerase I subunit A N-terminus AS86_3864 SM00649 Ribosomal protein L11/L12 AS86_3865 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AS86_3867 SM00421 helix_turn_helix, Lux Regulon AS86_3869 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS86_387 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_3870 SM00535 Ribonuclease III family AS86_3871 SM00840 AS86_3871 AS86_3876 SM00670 Large family of predicted nucleotide-binding domains AS86_3878 SM00382 ATPases associated with a variety of cellular activities AS86_3879 SM00382 ATPases associated with a variety of cellular activities AS86_3879 SM01086 C-terminal, D2-small domain, of ClpB protein AS86_390 SM00852 Probable molybdopterin binding domain AS86_3904 SM00530 Helix-turn-helix XRE-family like proteins AS86_3906 SM00905 Dihydroneopterin aldolase AS86_3914 SM00382 ATPases associated with a variety of cellular activities AS86_3916 SM00977 TilS substrate C-terminal domain AS86_3917 SM00331 Sigma factor PP2C-like phosphatases AS86_3917 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS86_3920 SM00316 Ribosomal protein S1-like RNA-binding domain AS86_3924 SM00363 S4 RNA-binding domain AS86_3927 SM00966 SpoVT / AbrB like domain AS86_3928 SM00487 DEAD-like helicases superfamily AS86_3928 SM00490 helicase superfamily c-terminal domain AS86_3928 SM00982 AS86_3928 AS86_3928 SM01058 CarD-like/TRCF domain AS86_3931 SM01400 AS86_3931 AS86_3940 SM00650 Ribosomal RNA adenine dimethylases AS86_3941 SM00493 AS86_3941 AS86_3944 SM00966 SpoVT / AbrB like domain AS86_3946 SM00465 GIY-YIG type nucleases (URI domain) AS86_3962 SM00493 AS86_3962 AS86_3964 SM00382 ATPases associated with a variety of cellular activities AS86_3974 SM00936 Penicillin-binding protein 5, C-terminal domain AS86_3975 SM00116 Domain in cystathionine beta-synthase and other proteins. AS86_3975 SM01240 AS86_3975 AS86_3983 SM00434 DNA Topoisomerase IV AS86_3984 SM00387 Histidine kinase-like ATPases AS86_3984 SM00433 TopoisomeraseII AS86_3987 SM00480 DNA polymerase III beta subunit AS86_3988 SM00382 ATPases associated with a variety of cellular activities AS86_3988 SM00760 Bacterial dnaA protein helix-turn-helix domain AS86_3992 SM00393 Putative single-stranded nucleic acids-binding domain AS86_3992 SM01245 AS86_3992 AS86_3994 SM01228 AS86_3994 AS86_3996 SM00470 ParB-like nuclease domain AS86_3998 SM00470 ParB-like nuclease domain AS86_4 SM00382 ATPases associated with a variety of cellular activities AS86_4 SM00962 SRP54-type protein, GTPase domain AS86_4 SM00963 SRP54-type protein, helical bundle domain AS86_40 SM00904 Riboflavin kinase AS86_4007 SM00267 diguanylate cyclase AS86_401 SM00822 AS86_401 AS86_4010 SM00788 Adenylosuccinate synthetase AS86_4015 SM00448 cheY-homologous receiver domain AS86_4015 SM00862 Transcriptional regulatory protein, C terminal AS86_4016 SM00091 PAS domain AS86_4016 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4016 SM00387 Histidine kinase-like ATPases AS86_4016 SM00388 His Kinase A (phosphoacceptor) domain AS86_4019 SM00849 Metallo-beta-lactamase superfamily AS86_4020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS86_4033 SM00857 Resolvase, N terminal domain AS86_4034 SM00465 GIY-YIG type nucleases (URI domain) AS86_4036 SM00857 Resolvase, N terminal domain AS86_4041 SM00530 Helix-turn-helix XRE-family like proteins AS86_4044 SM00857 Resolvase, N terminal domain AS86_4046 SM00857 Resolvase, N terminal domain AS86_4052 SM01240 AS86_4052 AS86_4053 SM00487 DEAD-like helicases superfamily AS86_4053 SM00490 helicase superfamily c-terminal domain AS86_4065 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS86_4065 SM00387 Histidine kinase-like ATPases AS86_4066 SM00448 cheY-homologous receiver domain AS86_4066 SM00850 LytTr DNA-binding domain AS86_4073 SM00382 ATPases associated with a variety of cellular activities AS86_4085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_4091 SM00448 cheY-homologous receiver domain AS86_4091 SM00850 LytTr DNA-binding domain AS86_4094 SM00267 diguanylate cyclase AS86_4096 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS86_4097 SM00421 helix_turn_helix, Lux Regulon AS86_4097 SM00448 cheY-homologous receiver domain AS86_4099 SM00100 Cyclic nucleotide-monophosphate binding domain AS86_41 SM01387 AS86_41 AS86_4106 SM00354 helix_turn _helix lactose operon repressor AS86_4108 SM00382 ATPases associated with a variety of cellular activities AS86_4110 SM00986 Uracil DNA glycosylase superfamily AS86_4110 SM00987 UreE urease accessory protein, C-terminal domain AS86_4119 SM00936 Penicillin-binding protein 5, C-terminal domain AS86_412 SM01022 AS86_412 AS86_4127 SM00382 ATPases associated with a variety of cellular activities AS86_4129 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_4135 SM00422 helix_turn_helix, mercury resistance AS86_4143 SM00836 DALR anticodon binding domain AS86_4143 SM01016 Arginyl tRNA synthetase N terminal dom AS86_4151 SM00382 ATPases associated with a variety of cellular activities AS86_4154 SM00421 helix_turn_helix, Lux Regulon AS86_4154 SM00448 cheY-homologous receiver domain AS86_4156 SM00530 Helix-turn-helix XRE-family like proteins AS86_4158 SM00052 Putative diguanylate phosphodiesterase AS86_4158 SM00267 diguanylate cyclase AS86_4160 SM00155 Phospholipase D. Active site motifs. AS86_417 SM00357 Cold shock protein domain AS86_4171 SM00530 Helix-turn-helix XRE-family like proteins AS86_4177 SM00530 Helix-turn-helix XRE-family like proteins AS86_418 SM00479 AS86_418 AS86_4187 SM00448 cheY-homologous receiver domain AS86_4191 SM00357 Cold shock protein domain AS86_4191 SM00382 ATPases associated with a variety of cellular activities AS86_4191 SM00959 Rho termination factor, N-terminal domain AS86_4194 SM00937 AS86_4194 AS86_42 SM00316 Ribosomal protein S1-like RNA-binding domain AS86_42 SM00322 K homology RNA-binding domain AS86_4204 SM00903 Flavin reductase like domain AS86_4207 SM00226 Low molecular weight phosphatase family AS86_4220 SM00382 ATPases associated with a variety of cellular activities AS86_4224 SM00052 Putative diguanylate phosphodiesterase AS86_4224 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS86_4224 SM00091 PAS domain AS86_4224 SM00267 diguanylate cyclase AS86_4240 SM00850 LytTr DNA-binding domain AS86_4241 SM00382 ATPases associated with a variety of cellular activities AS86_4257 SM00984 UDP binding domain AS86_4261 SM00448 cheY-homologous receiver domain AS86_4261 SM00862 Transcriptional regulatory protein, C terminal AS86_4262 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4262 SM00387 Histidine kinase-like ATPases AS86_4262 SM00388 His Kinase A (phosphoacceptor) domain AS86_4267 SM00530 Helix-turn-helix XRE-family like proteins AS86_4269 SM00382 ATPases associated with a variety of cellular activities AS86_4278 SM00487 DEAD-like helicases superfamily AS86_4278 SM00490 helicase superfamily c-terminal domain AS86_428 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AS86_4284 SM00287 Bacterial SH3 domain homologues AS86_429 SM00387 Histidine kinase-like ATPases AS86_429 SM00388 His Kinase A (phosphoacceptor) domain AS86_4291 SM00287 Bacterial SH3 domain homologues AS86_4320 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AS86_4321 SM00382 ATPases associated with a variety of cellular activities AS86_4324 SM00984 UDP binding domain AS86_4331 SM00487 DEAD-like helicases superfamily AS86_4331 SM00490 helicase superfamily c-terminal domain AS86_4333 SM00357 Cold shock protein domain AS86_4335 SM00957 SecA DEAD-like domain AS86_4335 SM00958 SecA preprotein cross-linking domain AS86_4336 SM00937 AS86_4336 AS86_4338 SM00382 ATPases associated with a variety of cellular activities AS86_4340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS86_4340 SM00245 tail specific protease AS86_4342 SM00382 ATPases associated with a variety of cellular activities AS86_4346 SM00422 helix_turn_helix, mercury resistance AS86_4349 SM00530 Helix-turn-helix XRE-family like proteins AS86_435 SM00646 AS86_435 AS86_4351 SM00422 helix_turn_helix, mercury resistance AS86_4354 SM00487 DEAD-like helicases superfamily AS86_4354 SM00490 helicase superfamily c-terminal domain AS86_4362 SM00028 Tetratricopeptide repeats AS86_4382 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS86_4386 SM01192 AS86_4386 AS86_4386 SM01193 AS86_4386 AS86_4392 SM00316 Ribosomal protein S1-like RNA-binding domain AS86_4392 SM00357 Cold shock protein domain AS86_4392 SM00955 AS86_4392 AS86_4394 SM00448 cheY-homologous receiver domain AS86_4394 SM00862 Transcriptional regulatory protein, C terminal AS86_4398 SM00382 ATPases associated with a variety of cellular activities AS86_4401 SM01116 AS86_4401 AS86_4402 SM00947 Carbonic anhydrase AS86_4403 SM00344 helix_turn_helix ASNC type AS86_4405 SM00344 helix_turn_helix ASNC type AS86_4411 SM00382 ATPases associated with a variety of cellular activities AS86_4418 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_4419 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AS86_4421 SM00363 S4 RNA-binding domain AS86_4428 SM01276 AS86_4428 AS86_443 SM00530 Helix-turn-helix XRE-family like proteins AS86_4446 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_4452 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_4452 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4453 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_4453 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4458 SM00387 Histidine kinase-like ATPases AS86_4458 SM00388 His Kinase A (phosphoacceptor) domain AS86_4459 SM00448 cheY-homologous receiver domain AS86_4459 SM00862 Transcriptional regulatory protein, C terminal AS86_446 SM00530 Helix-turn-helix XRE-family like proteins AS86_4463 SM00530 Helix-turn-helix XRE-family like proteins AS86_4478 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_4478 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4487 SM00849 Metallo-beta-lactamase superfamily AS86_4496 SM00493 AS86_4496 AS86_4499 SM00382 ATPases associated with a variety of cellular activities AS86_4499 SM00930 AS86_4499 AS86_4503 SM00382 ATPases associated with a variety of cellular activities AS86_4512 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_4514 SM00855 Phosphoglycerate mutase family AS86_4517 SM00422 helix_turn_helix, mercury resistance AS86_4540 SM00860 SMI1 / KNR4 family AS86_4546 SM00382 ATPases associated with a variety of cellular activities AS86_4559 SM00871 Bacterial transcription activator, effector binding domain AS86_4576 SM00479 AS86_4576 AS86_4577 SM01298 AS86_4577 AS86_4584 SM00344 helix_turn_helix ASNC type AS86_4586 SM00316 Ribosomal protein S1-like RNA-binding domain AS86_4624 SM00642 Alpha-amylase domain AS86_4631 SM00422 helix_turn_helix, mercury resistance AS86_4634 SM00357 Cold shock protein domain AS86_4642 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS86_4643 SM00448 cheY-homologous receiver domain AS86_4643 SM00862 Transcriptional regulatory protein, C terminal AS86_4644 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4644 SM00387 Histidine kinase-like ATPases AS86_4644 SM00388 His Kinase A (phosphoacceptor) domain AS86_4650 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_4650 SM00866 AS86_4650 AS86_4654 SM00382 ATPases associated with a variety of cellular activities AS86_4657 SM00387 Histidine kinase-like ATPases AS86_4658 SM00448 cheY-homologous receiver domain AS86_4658 SM00862 Transcriptional regulatory protein, C terminal AS86_4660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_4662 SM00382 ATPases associated with a variety of cellular activities AS86_4664 SM00342 helix_turn_helix, arabinose operon control protein AS86_4664 SM00871 Bacterial transcription activator, effector binding domain AS86_4665 SM00382 ATPases associated with a variety of cellular activities AS86_4669 SM00448 cheY-homologous receiver domain AS86_4669 SM00862 Transcriptional regulatory protein, C terminal AS86_4670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4670 SM00387 Histidine kinase-like ATPases AS86_4670 SM00388 His Kinase A (phosphoacceptor) domain AS86_4681 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS86_4687 SM00448 cheY-homologous receiver domain AS86_4687 SM00862 Transcriptional regulatory protein, C terminal AS86_4688 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4688 SM00387 Histidine kinase-like ATPases AS86_4688 SM00388 His Kinase A (phosphoacceptor) domain AS86_4690 SM00899 AS86_4690 AS86_4705 SM01234 AS86_4705 AS86_4706 SM00947 Carbonic anhydrase AS86_4708 SM00422 helix_turn_helix, mercury resistance AS86_4722 SM00382 ATPases associated with a variety of cellular activities AS86_4730 SM01060 AS86_4730 AS86_4731 SM00387 Histidine kinase-like ATPases AS86_4731 SM00388 His Kinase A (phosphoacceptor) domain AS86_4732 SM00387 Histidine kinase-like ATPases AS86_474 SM00507 HNH nucleases AS86_4748 SM00852 Probable molybdopterin binding domain AS86_4751 SM00014 Acid phosphatase homologues AS86_4758 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_4762 SM00382 ATPases associated with a variety of cellular activities AS86_4777 SM00450 Rhodanese Homology Domain AS86_4781 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_4784 SM00852 Probable molybdopterin binding domain AS86_4791 SM01058 CarD-like/TRCF domain AS86_4796 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_48 SM00857 Resolvase, N terminal domain AS86_4800 SM00363 S4 RNA-binding domain AS86_4801 SM00420 helix_turn_helix, Deoxyribose operon repressor AS86_4804 SM00642 Alpha-amylase domain AS86_4808 SM00849 Metallo-beta-lactamase superfamily AS86_4816 SM00646 AS86_4816 AS86_4817 SM00382 ATPases associated with a variety of cellular activities AS86_4817 SM00843 AS86_4817 AS86_4820 SM00422 helix_turn_helix, mercury resistance AS86_4829 SM00354 helix_turn _helix lactose operon repressor AS86_4835 SM00248 ankyrin repeats AS86_4836 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4836 SM00387 Histidine kinase-like ATPases AS86_4836 SM00388 His Kinase A (phosphoacceptor) domain AS86_4837 SM00448 cheY-homologous receiver domain AS86_4837 SM00862 Transcriptional regulatory protein, C terminal AS86_4841 SM00116 Domain in cystathionine beta-synthase and other proteins. AS86_4844 SM01266 AS86_4844 AS86_4845 SM00363 S4 RNA-binding domain AS86_4848 SM00363 S4 RNA-binding domain AS86_4848 SM01390 AS86_4848 AS86_4856 SM00981 AS86_4856 AS86_4881 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS86_4881 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS86_4891 SM00849 Metallo-beta-lactamase superfamily AS86_4893 SM00116 Domain in cystathionine beta-synthase and other proteins. AS86_4899 SM00481 DNA polymerase alpha chain like domain AS86_4900 SM00919 Malic enzyme, NAD binding domain AS86_4900 SM01274 AS86_4900 AS86_4901 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_491 SM00644 AS86_491 AS86_4910 SM01329 AS86_4910 AS86_4915 SM00448 cheY-homologous receiver domain AS86_4915 SM00862 Transcriptional regulatory protein, C terminal AS86_4916 SM00091 PAS domain AS86_4916 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_4916 SM00387 Histidine kinase-like ATPases AS86_4916 SM00388 His Kinase A (phosphoacceptor) domain AS86_4917 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS86_4917 SM00474 3'-5' exonuclease AS86_4917 SM00475 5'-3' exonuclease AS86_4917 SM00482 DNA polymerase A domain AS86_4918 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AS86_4918 SM01232 AS86_4918 AS86_4921 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS86_4925 SM00382 ATPases associated with a variety of cellular activities AS86_4928 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS86_4939 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_4941 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS86_4943 SM00873 B3/4 domain AS86_4943 SM00874 tRNA synthetase B5 domain AS86_4943 SM00896 Ferredoxin-fold anticodon binding domain AS86_4949 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS86_4949 SM00481 DNA polymerase alpha chain like domain AS86_4949 SM00483 DNA polymerase X family AS86_4950 SM00463 Small MutS-related domain AS86_4950 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS86_4950 SM00534 ATPase domain of DNA mismatch repair MUTS family AS86_4952 SM00363 S4 RNA-binding domain AS86_4954 SM00725 NEAr Transporter domain AS86_4955 SM00725 NEAr Transporter domain AS86_4956 SM00725 NEAr Transporter domain AS86_4959 SM00382 ATPases associated with a variety of cellular activities AS86_496 SM00530 Helix-turn-helix XRE-family like proteins AS86_4962 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AS86_4965 SM00448 cheY-homologous receiver domain AS86_4965 SM00862 Transcriptional regulatory protein, C terminal AS86_4966 SM00387 Histidine kinase-like ATPases AS86_4966 SM00388 His Kinase A (phosphoacceptor) domain AS86_4967 SM00382 ATPases associated with a variety of cellular activities AS86_4979 SM00893 Electron transfer flavoprotein domain AS86_4980 SM00893 Electron transfer flavoprotein domain AS86_4982 SM00465 GIY-YIG type nucleases (URI domain) AS86_4992 SM00382 ATPases associated with a variety of cellular activities AS86_4997 SM00530 Helix-turn-helix XRE-family like proteins AS86_5001 SM00421 helix_turn_helix, Lux Regulon AS86_5007 SM00909 Sporulation and spore germination AS86_5021 SM00382 ATPases associated with a variety of cellular activities AS86_5021 SM00994 ClpX C4-type zinc finger AS86_5021 SM01086 C-terminal, D2-small domain, of ClpB protein AS86_5022 SM00382 ATPases associated with a variety of cellular activities AS86_5023 SM00382 ATPases associated with a variety of cellular activities AS86_5023 SM00464 Found in ATP-dependent protease La (LON) AS86_5026 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_5031 SM01004 Delta-aminolevulinic acid dehydratase AS86_5033 SM00257 Lysin motif AS86_504 SM00382 ATPases associated with a variety of cellular activities AS86_505 SM00052 Putative diguanylate phosphodiesterase AS86_505 SM00091 PAS domain AS86_505 SM00267 diguanylate cyclase AS86_5051 SM01317 AS86_5051 AS86_5053 SM00448 cheY-homologous receiver domain AS86_5053 SM00862 Transcriptional regulatory protein, C terminal AS86_5054 SM00387 Histidine kinase-like ATPases AS86_5055 SM00382 ATPases associated with a variety of cellular activities AS86_5066 SM00257 Lysin motif AS86_5071 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS86_5072 SM00382 ATPases associated with a variety of cellular activities AS86_5076 SM01323 AS86_5076 AS86_508 SM01276 AS86_508 AS86_5085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_5085 SM00954 Region found in RelA / SpoT proteins AS86_5093 SM00382 ATPases associated with a variety of cellular activities AS86_5097 SM00028 Tetratricopeptide repeats AS86_51 SM00530 Helix-turn-helix XRE-family like proteins AS86_5104 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS86_5106 SM00732 Likely ribonuclease with RNase H fold. AS86_512 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS86_512 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_512 SM00319 Homologues of the ligand binding domain of Tar AS86_5126 SM00382 ATPases associated with a variety of cellular activities AS86_5131 SM00530 Helix-turn-helix XRE-family like proteins AS86_514 SM00028 Tetratricopeptide repeats AS86_5140 SM00855 Phosphoglycerate mutase family AS86_5145 SM00098 Alkaline phosphatase homologues AS86_5147 SM00954 Region found in RelA / SpoT proteins AS86_5158 SM01103 AS86_5158 AS86_5160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_5164 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS86_5166 SM00849 Metallo-beta-lactamase superfamily AS86_5172 SM00838 Elongation factor G C-terminus AS86_5174 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_5178 SM00271 DnaJ molecular chaperone homology domain AS86_5181 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_5187 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_5194 SM00116 Domain in cystathionine beta-synthase and other proteins. AS86_5196 SM00400 zinc finger AS86_5196 SM00493 AS86_5196 AS86_5196 SM00766 DNA primase DnaG DnaB-binding AS86_52 SM00530 Helix-turn-helix XRE-family like proteins AS86_5203 SM00487 DEAD-like helicases superfamily AS86_5203 SM00490 helicase superfamily c-terminal domain AS86_5204 SM00518 AP endonuclease family 2 AS86_5207 SM00382 ATPases associated with a variety of cellular activities AS86_5221 SM00530 Helix-turn-helix XRE-family like proteins AS86_5222 SM00530 Helix-turn-helix XRE-family like proteins AS86_5225 SM00530 Helix-turn-helix XRE-family like proteins AS86_5227 SM00487 DEAD-like helicases superfamily AS86_5229 SM00990 AS86_5229 AS86_5235 SM00885 D5 N terminal like AS86_5238 SM00857 Resolvase, N terminal domain AS86_524 SM00060 Fibronectin type 3 domain AS86_524 SM00495 Chitin-binding domain type 3 AS86_525 SM00148 Phospholipase C, catalytic domain (part); domain X AS86_5257 SM00287 Bacterial SH3 domain homologues AS86_5257 SM00644 AS86_5257 AS86_5269 SM00382 ATPases associated with a variety of cellular activities AS86_5277 SM00849 Metallo-beta-lactamase superfamily AS86_5279 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_5284 SM01018 B12 binding domain AS86_5295 SM00382 ATPases associated with a variety of cellular activities AS86_5302 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AS86_5309 SM00487 DEAD-like helicases superfamily AS86_5309 SM00490 helicase superfamily c-terminal domain AS86_5320 SM00354 helix_turn _helix lactose operon repressor AS86_5322 SM00450 Rhodanese Homology Domain AS86_5328 SM00529 Helix-turn-helix diphteria tox regulatory element AS86_5335 SM00841 Elongation factor P, C-terminal AS86_5335 SM01185 AS86_5335 AS86_5339 SM00382 ATPases associated with a variety of cellular activities AS86_5348 SM00878 Biotin carboxylase C-terminal domain AS86_5355 SM00861 Transketolase, pyrimidine binding domain AS86_5356 SM00363 S4 RNA-binding domain AS86_5359 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS86_536 SM00858 AS86_536 AS86_5360 SM00448 cheY-homologous receiver domain AS86_5364 SM00530 Helix-turn-helix XRE-family like proteins AS86_5368 SM00857 Resolvase, N terminal domain AS86_5380 SM00091 PAS domain AS86_5380 SM00382 ATPases associated with a variety of cellular activities AS86_5382 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS86_5386 SM00861 Transketolase, pyrimidine binding domain AS86_5393 SM00062 Bacterial periplasmic substrate-binding proteins AS86_5393 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS86_5395 SM00382 ATPases associated with a variety of cellular activities AS86_5404 SM00831 Cation transporter/ATPase, N-terminus AS86_5407 SM00849 Metallo-beta-lactamase superfamily AS86_5412 SM00849 Metallo-beta-lactamase superfamily AS86_5415 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS86_542 SM00450 Rhodanese Homology Domain AS86_542 SM00849 Metallo-beta-lactamase superfamily AS86_5422 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_5432 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_5432 SM00876 Biotin and Thiamin Synthesis associated domain AS86_5438 SM00704 CDGSH-type zinc finger. Function unknown. AS86_5442 SM00354 helix_turn _helix lactose operon repressor AS86_5461 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AS86_5465 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_5469 SM00382 ATPases associated with a variety of cellular activities AS86_5470 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_5471 SM00936 Penicillin-binding protein 5, C-terminal domain AS86_5473 SM00387 Histidine kinase-like ATPases AS86_548 SM00028 Tetratricopeptide repeats AS86_5492 SM00849 Metallo-beta-lactamase superfamily AS86_5495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_5495 SM00866 AS86_5495 AS86_5497 SM01061 CAT RNA binding domain AS86_5504 SM00267 diguanylate cyclase AS86_551 SM00829 Enoylreductase AS86_5510 SM01007 Class II Aldolase and Adducin N-terminal domain AS86_552 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_5527 SM00382 ATPases associated with a variety of cellular activities AS86_5534 SM00382 ATPases associated with a variety of cellular activities AS86_5535 SM00642 Alpha-amylase domain AS86_5536 SM00642 Alpha-amylase domain AS86_5540 SM00354 helix_turn _helix lactose operon repressor AS86_5543 SM00387 Histidine kinase-like ATPases AS86_5543 SM00388 His Kinase A (phosphoacceptor) domain AS86_5552 SM00267 diguanylate cyclase AS86_5560 SM00052 Putative diguanylate phosphodiesterase AS86_5573 SM00849 Metallo-beta-lactamase superfamily AS86_5579 SM00861 Transketolase, pyrimidine binding domain AS86_5595 SM00838 Elongation factor G C-terminus AS86_5600 SM00670 Large family of predicted nucleotide-binding domains AS86_5604 SM00878 Biotin carboxylase C-terminal domain AS86_5617 SM00855 Phosphoglycerate mutase family AS86_5625 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS86_5629 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AS86_5635 SM00740 AS86_5635 AS86_5636 SM00740 AS86_5636 AS86_564 SM00422 helix_turn_helix, mercury resistance AS86_564 SM00871 Bacterial transcription activator, effector binding domain AS86_5644 SM00842 Cell division protein FtsA AS86_5645 SM00864 Tubulin/FtsZ family, GTPase domain AS86_5645 SM00865 Tubulin/FtsZ family, C-terminal domain AS86_5654 SM00363 S4 RNA-binding domain AS86_5659 SM00363 S4 RNA-binding domain AS86_5664 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AS86_5665 SM00851 MGS-like domain AS86_5665 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS86_5665 SM01209 AS86_5665 AS86_5668 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS86_5677 SM00831 Cation transporter/ATPase, N-terminus AS86_568 SM00642 Alpha-amylase domain AS86_5680 SM00072 Guanylate kinase homologues. AS86_5681 SM01409 AS86_5681 AS86_5683 SM00487 DEAD-like helicases superfamily AS86_5683 SM00490 helicase superfamily c-terminal domain AS86_5688 SM00331 Sigma factor PP2C-like phosphatases AS86_5688 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS86_5689 SM00220 Serine/Threonine protein kinases, catalytic domain AS86_5689 SM00740 AS86_5689 AS86_5692 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AS86_5695 SM01120 AS86_5695 AS86_5695 SM01121 AS86_5695 AS86_5696 SM00487 DEAD-like helicases superfamily AS86_5696 SM00490 helicase superfamily c-terminal domain AS86_5699 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS86_570 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS86_570 SM00534 ATPase domain of DNA mismatch repair MUTS family AS86_5700 SM00822 AS86_5700 AS86_5702 SM00358 Double-stranded RNA binding motif AS86_5702 SM00535 Ribonuclease III family AS86_5709 SM00382 ATPases associated with a variety of cellular activities AS86_5710 SM00357 Cold shock protein domain AS86_5714 SM01058 CarD-like/TRCF domain AS86_572 SM00855 Phosphoglycerate mutase family AS86_573 SM00829 Enoylreductase AS86_5731 SM00382 ATPases associated with a variety of cellular activities AS86_5732 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_5739 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_5742 SM00420 helix_turn_helix, Deoxyribose operon repressor AS86_5742 SM01134 AS86_5742 AS86_5749 SM00530 Helix-turn-helix XRE-family like proteins AS86_5750 SM00458 Ricin-type beta-trefoil AS86_5758 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS86_5758 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS86_5758 SM00493 AS86_5758 AS86_5770 SM00507 HNH nucleases AS86_5789 SM00530 Helix-turn-helix XRE-family like proteins AS86_5790 SM00530 Helix-turn-helix XRE-family like proteins AS86_5803 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_5808 SM00849 Metallo-beta-lactamase superfamily AS86_5811 SM00100 Cyclic nucleotide-monophosphate binding domain AS86_5811 SM00419 helix_turn_helix, cAMP Regulatory protein AS86_5812 SM01321 AS86_5812 AS86_5820 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS86_5820 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS86_5824 SM00060 Fibronectin type 3 domain AS86_5824 SM00495 Chitin-binding domain type 3 AS86_5824 SM01276 AS86_5824 AS86_5836 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_5836 SM00387 Histidine kinase-like ATPases AS86_5836 SM00388 His Kinase A (phosphoacceptor) domain AS86_5837 SM00448 cheY-homologous receiver domain AS86_5837 SM00862 Transcriptional regulatory protein, C terminal AS86_5839 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS86_5842 SM00382 ATPases associated with a variety of cellular activities AS86_5843 SM00411 bacterial (prokaryotic) histone like domain AS86_5847 SM00148 Phospholipase C, catalytic domain (part); domain X AS86_5851 SM00060 Fibronectin type 3 domain AS86_5851 SM00495 Chitin-binding domain type 3 AS86_5856 SM01120 AS86_5856 AS86_5863 SM00287 Bacterial SH3 domain homologues AS86_5863 SM00644 AS86_5863 AS86_5870 SM00854 Bacterial capsule synthesis protein PGA_cap AS86_5873 SM00530 Helix-turn-helix XRE-family like proteins AS86_5890 SM00530 Helix-turn-helix XRE-family like proteins AS86_5895 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_5898 SM00060 Fibronectin type 3 domain AS86_5904 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS86_5904 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS86_5914 SM00387 Histidine kinase-like ATPases AS86_5914 SM00388 His Kinase A (phosphoacceptor) domain AS86_5915 SM00448 cheY-homologous receiver domain AS86_5915 SM00862 Transcriptional regulatory protein, C terminal AS86_5918 SM00382 ATPases associated with a variety of cellular activities AS86_5923 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_5924 SM00530 Helix-turn-helix XRE-family like proteins AS86_593 SM00829 Enoylreductase AS86_5932 SM00823 Phosphopantetheine attachment site AS86_5932 SM01294 AS86_5932 AS86_594 SM00849 Metallo-beta-lactamase superfamily AS86_5944 SM00116 Domain in cystathionine beta-synthase and other proteins. AS86_5944 SM00924 MgtE intracellular N domain AS86_5949 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_5950 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_5964 SM00825 Beta-ketoacyl synthase AS86_5971 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS86_5974 SM00382 ATPases associated with a variety of cellular activities AS86_5983 SM00530 Helix-turn-helix XRE-family like proteins AS86_5984 SM00530 Helix-turn-helix XRE-family like proteins AS86_5985 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_5989 SM00825 Beta-ketoacyl synthase AS86_5992 SM00382 ATPases associated with a variety of cellular activities AS86_5993 SM00382 ATPases associated with a variety of cellular activities AS86_5994 SM00729 Elongator protein 3, MiaB family, Radical SAM AS86_6001 SM00825 Beta-ketoacyl synthase AS86_6013 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_6013 SM00387 Histidine kinase-like ATPases AS86_6013 SM00388 His Kinase A (phosphoacceptor) domain AS86_6014 SM00448 cheY-homologous receiver domain AS86_6014 SM00862 Transcriptional regulatory protein, C terminal AS86_6027 SM00382 ATPases associated with a variety of cellular activities AS86_6029 SM00420 helix_turn_helix, Deoxyribose operon repressor AS86_6029 SM01134 AS86_6029 AS86_6036 SM00060 Fibronectin type 3 domain AS86_6036 SM00495 Chitin-binding domain type 3 AS86_6037 SM00060 Fibronectin type 3 domain AS86_6037 SM00495 Chitin-binding domain type 3 AS86_6037 SM01276 AS86_6037 AS86_6043 SM00487 DEAD-like helicases superfamily AS86_6043 SM00490 helicase superfamily c-terminal domain AS86_606 SM00849 Metallo-beta-lactamase superfamily AS86_6075 SM00433 TopoisomeraseII AS86_6076 SM00434 DNA Topoisomerase IV AS86_6090 SM00400 zinc finger AS86_612 SM00382 ATPases associated with a variety of cellular activities AS86_614 SM00420 helix_turn_helix, Deoxyribose operon repressor AS86_6148 SM00507 HNH nucleases AS86_615 SM00871 Bacterial transcription activator, effector binding domain AS86_6155 SM00530 Helix-turn-helix XRE-family like proteins AS86_6166 SM00047 Lysozyme subfamily 2 AS86_6186 SM00954 Region found in RelA / SpoT proteins AS86_619 SM00636 AS86_619 AS86_6192 SM00287 Bacterial SH3 domain homologues AS86_6192 SM00644 AS86_6192 AS86_6193 SM00644 AS86_6193 AS86_620 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_6218 SM00474 3'-5' exonuclease AS86_6218 SM00482 DNA polymerase A domain AS86_6236 SM00240 Forkhead associated domain AS86_6239 SM00331 Sigma factor PP2C-like phosphatases AS86_6239 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS86_6255 SM00220 Serine/Threonine protein kinases, catalytic domain AS86_6293 SM00530 Helix-turn-helix XRE-family like proteins AS86_632 SM00849 Metallo-beta-lactamase superfamily AS86_6339 SM00271 DnaJ molecular chaperone homology domain AS86_637 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_637 SM00866 AS86_637 AS86_6418 SM00475 5'-3' exonuclease AS86_642 SM00914 AS86_642 AS86_6469 SM00530 Helix-turn-helix XRE-family like proteins AS86_6478 SM00382 ATPases associated with a variety of cellular activities AS86_649 SM00861 Transketolase, pyrimidine binding domain AS86_650 SM01350 AS86_650 AS86_6531 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_6559 SM00481 DNA polymerase alpha chain like domain AS86_6564 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS86_6564 SM00292 breast cancer carboxy-terminal domain AS86_6564 SM00532 Ligase N family AS86_6568 SM00506 Appr-1"-p processing enzyme AS86_6569 SM00465 GIY-YIG type nucleases (URI domain) AS86_6569 SM00497 Intron encoded nuclease repeat motif AS86_6578 SM00028 Tetratricopeptide repeats AS86_659 SM00422 helix_turn_helix, mercury resistance AS86_6590 SM00287 Bacterial SH3 domain homologues AS86_6590 SM00644 AS86_6590 AS86_660 SM01091 Transporter associated domain AS86_6619 SM00382 ATPases associated with a variety of cellular activities AS86_6636 SM00487 DEAD-like helicases superfamily AS86_6636 SM00490 helicase superfamily c-terminal domain AS86_6638 SM00448 cheY-homologous receiver domain AS86_6638 SM00862 Transcriptional regulatory protein, C terminal AS86_6639 SM00387 Histidine kinase-like ATPases AS86_6639 SM00388 His Kinase A (phosphoacceptor) domain AS86_6640 SM00387 Histidine kinase-like ATPases AS86_6647 SM00849 Metallo-beta-lactamase superfamily AS86_6648 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS86_665 SM00028 Tetratricopeptide repeats AS86_6656 SM01040 BRO family, N-terminal domain AS86_6685 SM00465 GIY-YIG type nucleases (URI domain) AS86_6713 SM00860 SMI1 / KNR4 family AS86_6739 SM00257 Lysin motif AS86_6769 SM00305 Hint (Hedgehog/Intein) domain C-terminal region AS86_678 SM00382 ATPases associated with a variety of cellular activities AS86_6797 SM00220 Serine/Threonine protein kinases, catalytic domain AS86_6797 SM01260 AS86_6797 AS86_6800 SM00382 ATPases associated with a variety of cellular activities AS86_6805 SM00857 Resolvase, N terminal domain AS86_681 SM01266 AS86_681 AS86_6816 SM00857 Resolvase, N terminal domain AS86_6836 SM00857 Resolvase, N terminal domain AS86_6837 SM00148 Phospholipase C, catalytic domain (part); domain X AS86_6853 SM00530 Helix-turn-helix XRE-family like proteins AS86_6861 SM00530 Helix-turn-helix XRE-family like proteins AS86_6868 SM00530 Helix-turn-helix XRE-family like proteins AS86_6869 SM00530 Helix-turn-helix XRE-family like proteins AS86_6879 SM00047 Lysozyme subfamily 2 AS86_6905 SM00530 Helix-turn-helix XRE-family like proteins AS86_692 SM00530 Helix-turn-helix XRE-family like proteins AS86_695 SM00382 ATPases associated with a variety of cellular activities AS86_70 SM00357 Cold shock protein domain AS86_717 SM00382 ATPases associated with a variety of cellular activities AS86_729 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_734 SM00854 Bacterial capsule synthesis protein PGA_cap AS86_74 SM00507 HNH nucleases AS86_741 SM00860 SMI1 / KNR4 family AS86_751 SM00860 SMI1 / KNR4 family AS86_765 SM00644 AS86_765 AS86_768 SM00342 helix_turn_helix, arabinose operon control protein AS86_782 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_784 SM00448 cheY-homologous receiver domain AS86_784 SM00862 Transcriptional regulatory protein, C terminal AS86_785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_785 SM00387 Histidine kinase-like ATPases AS86_785 SM00388 His Kinase A (phosphoacceptor) domain AS86_788 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_790 SM00382 ATPases associated with a variety of cellular activities AS86_804 SM00448 cheY-homologous receiver domain AS86_804 SM00862 Transcriptional regulatory protein, C terminal AS86_805 SM00387 Histidine kinase-like ATPases AS86_805 SM00388 His Kinase A (phosphoacceptor) domain AS86_806 SM00382 ATPases associated with a variety of cellular activities AS86_809 SM00421 helix_turn_helix, Lux Regulon AS86_809 SM00448 cheY-homologous receiver domain AS86_815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS86_815 SM00387 Histidine kinase-like ATPases AS86_815 SM00388 His Kinase A (phosphoacceptor) domain AS86_816 SM00448 cheY-homologous receiver domain AS86_816 SM00862 Transcriptional regulatory protein, C terminal AS86_824 SM00344 helix_turn_helix ASNC type AS86_828 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_831 SM00530 Helix-turn-helix XRE-family like proteins AS86_841 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_844 SM00226 Low molecular weight phosphatase family AS86_847 SM00382 ATPases associated with a variety of cellular activities AS86_866 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_882 SM00387 Histidine kinase-like ATPases AS86_883 SM00448 cheY-homologous receiver domain AS86_889 SM00465 GIY-YIG type nucleases (URI domain) AS86_890 SM00342 helix_turn_helix, arabinose operon control protein AS86_895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS86_895 SM00091 PAS domain AS86_895 SM00387 Histidine kinase-like ATPases AS86_895 SM00388 His Kinase A (phosphoacceptor) domain AS86_899 SM00530 Helix-turn-helix XRE-family like proteins AS86_900 SM00870 AS86_900 AS86_908 SM00849 Metallo-beta-lactamase superfamily AS86_922 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS86_925 SM00346 helix_turn_helix isocitrate lyase regulation AS86_926 SM00796 Allophanate hydrolase subunit 1 AS86_927 SM00797 Allophanate hydrolase subunit 2 AS86_941 SM01058 CarD-like/TRCF domain AS86_962 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS86_967 SM00342 helix_turn_helix, arabinose operon control protein AS86_967 SM00871 Bacterial transcription activator, effector binding domain AS86_97 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS86_972 SM00382 ATPases associated with a variety of cellular activities AS86_974 SM00773 Proposed nucleic acid binding domain AS86_977 SM00889 Elongation factor G, domain IV AS86_978 SM00347 helix_turn_helix multiple antibiotic resistance protein AS86_99 SM01130 AS86_99 AS86_990 SM01060 AS86_990