locus-tag class description BF38_1 PF00437 Type II/IV secretion system protein BF38_10 PF03033 Glycosyltransferase family 28 N-terminal domain BF38_10 PF04101 Glycosyltransferase family 28 C-terminal domain BF38_100 PF04607 Region found in RelA / SpoT proteins BF38_1000 PF02397 Bacterial sugar transferase BF38_1001 PF00483 Nucleotidyl transferase BF38_1003 PF13614 AAA domain BF38_1004 PF02706 Chain length determinant protein BF38_1004 PF13807 G-rich domain on putative tyrosine kinase BF38_1005 PF13614 AAA domain BF38_1006 PF07977 FabA-like domain BF38_1008 PF12116 Stage III sporulation protein D BF38_1009 PF01551 Peptidase family M23 BF38_1011 PF00005 ABC transporter BF38_1012 PF00072 Response regulator receiver domain BF38_1012 PF04397 LytTr DNA-binding domain BF38_1013 PF08486 Stage II sporulation protein BF38_1014 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF38_1016 PF06612 Protein of unknown function (DUF1146) BF38_1017 PF00361 Proton-conducting membrane transporter BF38_1018 PF00361 Proton-conducting membrane transporter BF38_1019 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF38_1019 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BF38_1019 PF00361 Proton-conducting membrane transporter BF38_102 PF00245 Alkaline phosphatase BF38_1020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BF38_1021 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BF38_1023 PF00146 NADH dehydrogenase BF38_1024 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BF38_1027 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BF38_1028 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BF38_1029 PF00563 EAL domain BF38_1029 PF00990 Diguanylate cyclase, GGDEF domain BF38_1029 PF03707 Bacterial signalling protein N terminal repeat BF38_1032 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BF38_1032 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BF38_1033 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF38_1033 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF38_1034 PF00231 ATP synthase BF38_1035 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF38_1035 PF00306 ATP synthase alpha/beta chain, C terminal domain BF38_1035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF38_1036 PF00213 ATP synthase delta (OSCP) subunit BF38_1037 PF00430 ATP synthase B/B' CF(0) BF38_1038 PF00137 ATP synthase subunit C BF38_1039 PF00119 ATP synthase A chain BF38_104 PF08386 TAP-like protein BF38_104 PF00561 alpha/beta hydrolase fold BF38_1040 PF03899 ATP synthase I chain BF38_1043 PF00464 Serine hydroxymethyltransferase BF38_1044 PF04260 Protein of unknown function (DUF436) BF38_1045 PF02502 Ribose/Galactose Isomerase BF38_1046 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF38_1047 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF38_1048 PF07681 DoxX BF38_1049 PF01613 Flavin reductase like domain BF38_1051 PF02659 Putative manganese efflux pump BF38_1052 PF03481 Putative GTP-binding controlling metal-binding BF38_1052 PF01300 Telomere recombination BF38_1054 PF09551 Stage II sporulation protein R (spore_II_R) BF38_1055 PF13847 Methyltransferase domain BF38_1055 PF17827 PrmC N-terminal domain BF38_1056 PF00472 RF-1 domain BF38_1056 PF03462 PCRF domain BF38_1057 PF00265 Thymidine kinase BF38_1058 PF01197 Ribosomal protein L31 BF38_1059 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF38_1059 PF07498 Rho termination factor, N-terminal domain BF38_1059 PF07497 Rho termination factor, RNA-binding domain BF38_1060 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF38_1061 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF38_1062 PF01116 Fructose-bisphosphate aldolase class-II BF38_1063 PF00072 Response regulator receiver domain BF38_1064 PF10740 Domain of unknown function (DUF2529) BF38_1065 PF00117 Glutamine amidotransferase class-I BF38_1065 PF06418 CTP synthase N-terminus BF38_1066 PF05066 HB1, ASXL, restriction endonuclease HTH domain BF38_1068 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF38_1068 PF02770 Acyl-CoA dehydrogenase, middle domain BF38_1068 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF38_1069 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF38_1069 PF02770 Acyl-CoA dehydrogenase, middle domain BF38_1069 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF38_1070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF38_1070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF38_1071 PF02803 Thiolase, C-terminal domain BF38_1071 PF00108 Thiolase, N-terminal domain BF38_1072 PF13183 4Fe-4S dicluster domain BF38_1072 PF02754 Cysteine-rich domain BF38_1073 PF13091 PLD-like domain BF38_1074 PF03851 UV-endonuclease UvdE BF38_1075 PF00990 Diguanylate cyclase, GGDEF domain BF38_1075 PF03707 Bacterial signalling protein N terminal repeat BF38_1075 PF00563 EAL domain BF38_1078 PF00196 Bacterial regulatory proteins, luxR family BF38_1078 PF00072 Response regulator receiver domain BF38_1079 PF00005 ABC transporter BF38_1080 PF00557 Metallopeptidase family M24 BF38_1081 PF01473 Putative cell wall binding repeat BF38_1081 PF02324 Glycosyl hydrolase family 70 BF38_1082 PF04389 Peptidase family M28 BF38_1082 PF02225 PA domain BF38_1086 PF08281 Sigma-70, region 4 BF38_1086 PF04542 Sigma-70 region 2 BF38_1087 PF05746 DALR anticodon binding domain BF38_1087 PF03485 Arginyl tRNA synthetase N terminal domain BF38_1087 PF00750 tRNA synthetases class I (R) BF38_1088 PF09148 Domain of unknown function (DUF1934) BF38_1089 PF17676 LD-carboxypeptidase C-terminal domain BF38_1089 PF02016 LD-carboxypeptidase N-terminal domain BF38_1092 PF00491 Arginase family BF38_1093 PF17284 Spermidine synthase tetramerisation domain BF38_1094 PF07690 Major Facilitator Superfamily BF38_1095 PF13411 MerR HTH family regulatory protein BF38_1096 PF03009 Glycerophosphoryl diester phosphodiesterase family BF38_1097 PF00905 Penicillin binding protein transpeptidase domain BF38_1097 PF00912 Transglycosylase BF38_1098 PF08741 YwhD family BF38_1099 PF02163 Peptidase family M50 BF38_11 PF00809 Pterin binding enzyme BF38_11 PF02310 B12 binding domain BF38_11 PF02607 B12 binding domain BF38_11 PF02965 Vitamin B12 dependent methionine synthase, activation domain BF38_11 PF02574 Homocysteine S-methyltransferase BF38_1100 PF01361 Tautomerase enzyme BF38_1101 PF01966 HD domain BF38_1102 PF01497 Periplasmic binding protein BF38_1103 PF00005 ABC transporter BF38_1104 PF01032 FecCD transport family BF38_1105 PF01032 FecCD transport family BF38_1106 PF07293 Protein of unknown function (DUF1450) BF38_1109 PF03099 Biotin/lipoate A/B protein ligase family BF38_111 PF02225 PA domain BF38_111 PF05922 Peptidase inhibitor I9 BF38_111 PF13860 FlgD Ig-like domain BF38_111 PF00082 Subtilase family BF38_1110 PF01515 Phosphate acetyl/butaryl transferase BF38_1112 PF00768 D-alanyl-D-alanine carboxypeptidase BF38_1112 PF07943 Penicillin-binding protein 5, C-terminal domain BF38_1113 PF07486 Cell Wall Hydrolase BF38_1114 PF09671 Spore coat protein (Spore_GerQ) BF38_1115 PF04241 Protein of unknown function (DUF423) BF38_1117 PF07885 Ion channel BF38_1117 PF02254 TrkA-N domain BF38_1118 PF00860 Permease family BF38_112 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BF38_1120 PF12823 Domain of unknown function (DUF3817) BF38_1121 PF03167 Uracil DNA glycosylase superfamily BF38_1122 PF12679 ABC-2 family transporter protein BF38_1123 PF00005 ABC transporter BF38_1124 PF13472 GDSL-like Lipase/Acylhydrolase family BF38_1125 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF38_1125 PF00356 Bacterial regulatory proteins, lacI family BF38_1127 PF03447 Homoserine dehydrogenase, NAD binding domain BF38_1127 PF01842 ACT domain BF38_1127 PF00742 Homoserine dehydrogenase BF38_1128 PF04204 Homoserine O-succinyltransferase BF38_1129 PF01053 Cys/Met metabolism PLP-dependent enzyme BF38_1131 PF13419 Haloacid dehalogenase-like hydrolase BF38_1132 PF00027 Cyclic nucleotide-binding domain BF38_1133 PF02525 Flavodoxin-like fold BF38_1134 PF00072 Response regulator receiver domain BF38_1134 PF00196 Bacterial regulatory proteins, luxR family BF38_1135 PF07730 Histidine kinase BF38_1135 PF13185 GAF domain BF38_1136 PF08543 Phosphomethylpyrimidine kinase BF38_1137 PF07694 5TMR of 5TMR-LYT BF38_1137 PF00990 Diguanylate cyclase, GGDEF domain BF38_1138 PF04328 Selenoprotein, putative BF38_1139 PF02554 Carbon starvation protein CstA BF38_1139 PF13722 5TM C-terminal transporter carbon starvation CstA BF38_114 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_1140 PF00072 Response regulator receiver domain BF38_1140 PF04397 LytTr DNA-binding domain BF38_1141 PF07690 Major Facilitator Superfamily BF38_1142 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF38_1145 PF03458 UPF0126 domain BF38_1146 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_1148 PF03061 Thioesterase superfamily BF38_115 PF07681 DoxX BF38_1150 PF00535 Glycosyl transferase family 2 BF38_1151 PF00005 ABC transporter BF38_1151 PF12848 ABC transporter BF38_1155 PF00535 Glycosyl transferase family 2 BF38_1156 PF00440 Bacterial regulatory proteins, tetR family BF38_1157 PF00873 AcrB/AcrD/AcrF family BF38_1158 PF01641 SelR domain BF38_1158 PF01625 Peptide methionine sulfoxide reductase BF38_1159 PF01594 AI-2E family transporter BF38_1160 PF04172 LrgB-like family BF38_1161 PF03788 LrgA family BF38_1162 PF00072 Response regulator receiver domain BF38_1162 PF04397 LytTr DNA-binding domain BF38_1163 PF06580 Histidine kinase BF38_1163 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1163 PF13492 GAF domain BF38_1163 PF07694 5TMR of 5TMR-LYT BF38_1164 PF07690 Major Facilitator Superfamily BF38_1165 PF02028 BCCT, betaine/carnitine/choline family transporter BF38_1166 PF02898 Nitric oxide synthase, oxygenase domain BF38_1167 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF38_1167 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF38_1169 PF02293 AmiS/UreI family transporter BF38_1171 PF16363 GDP-mannose 4,6 dehydratase BF38_1172 PF03006 Haemolysin-III related BF38_1174 PF00271 Helicase conserved C-terminal domain BF38_1174 PF00270 DEAD/DEAH box helicase BF38_1174 PF03880 DbpA RNA binding domain BF38_1176 PF00478 IMP dehydrogenase / GMP reductase domain BF38_1177 PF08439 Oligopeptidase F BF38_1177 PF01432 Peptidase family M3 BF38_1179 PF02590 Predicted SPOUT methyltransferase BF38_1181 PF13180 PDZ domain BF38_1182 PF00753 Metallo-beta-lactamase superfamily BF38_1183 PF09648 YycH protein BF38_1184 PF07435 YycH protein BF38_1185 PF00672 HAMP domain BF38_1185 PF13426 PAS domain BF38_1185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1185 PF00512 His Kinase A (phospho-acceptor) domain BF38_1186 PF00486 Transcriptional regulatory protein, C terminal BF38_1186 PF00072 Response regulator receiver domain BF38_1191 PF00709 Adenylosuccinate synthetase BF38_1192 PF00772 DnaB-like helicase N terminal domain BF38_1192 PF03796 DnaB-like helicase C terminal domain BF38_1193 PF01281 Ribosomal protein L9, N-terminal domain BF38_1193 PF03948 Ribosomal protein L9, C-terminal domain BF38_1194 PF02272 DHHA1 domain BF38_1194 PF01368 DHH family BF38_1195 PF09991 Predicted membrane protein (DUF2232) BF38_1196 PF01084 Ribosomal protein S18 BF38_1197 PF00436 Single-strand binding protein family BF38_1198 PF01250 Ribosomal protein S6 BF38_1199 PF01926 50S ribosome-binding GTPase BF38_1199 PF06071 Protein of unknown function (DUF933) BF38_12 PF02219 Methylenetetrahydrofolate reductase BF38_12 PF02574 Homocysteine S-methyltransferase BF38_1200 PF06107 Bacterial protein of unknown function (DUF951) BF38_1201 PF00924 Mechanosensitive ion channel BF38_1202 PF06866 Protein of unknown function (DUF1256) BF38_1203 PF17762 HTH domain found in ParB protein BF38_1203 PF02195 ParB-like nuclease domain BF38_1204 PF13614 AAA domain BF38_1205 PF17762 HTH domain found in ParB protein BF38_1205 PF02195 ParB-like nuclease domain BF38_1206 PF02527 rRNA small subunit methyltransferase G BF38_1207 PF01134 Glucose inhibited division protein A BF38_1207 PF13932 GidA associated domain BF38_1208 PF10396 GTP-binding protein TrmE N-terminus BF38_1208 PF12631 MnmE helical domain BF38_1208 PF01926 50S ribosome-binding GTPase BF38_1209 PF14804 Jag N-terminus BF38_1209 PF01424 R3H domain BF38_121 PF00005 ABC transporter BF38_1210 PF02096 60Kd inner membrane protein BF38_1211 PF00825 Ribonuclease P BF38_1212 PF00468 Ribosomal protein L34 BF38_1213 PF00308 Bacterial dnaA protein BF38_1213 PF11638 DnaA N-terminal domain BF38_1213 PF08299 Bacterial dnaA protein helix-turn-helix BF38_1214 PF02768 DNA polymerase III beta subunit, C-terminal domain BF38_1214 PF02767 DNA polymerase III beta subunit, central domain BF38_1214 PF00712 DNA polymerase III beta subunit, N-terminal domain BF38_1216 PF02463 RecF/RecN/SMC N terminal domain BF38_1219 PF00521 DNA gyrase/topoisomerase IV, subunit A BF38_1219 PF03989 DNA gyrase C-terminal domain, beta-propeller BF38_122 PF01032 FecCD transport family BF38_1224 PF14175 YaaC-like Protein BF38_1225 PF00571 CBS domain BF38_1225 PF00478 IMP dehydrogenase / GMP reductase domain BF38_1226 PF00768 D-alanyl-D-alanine carboxypeptidase BF38_1226 PF07943 Penicillin-binding protein 5, C-terminal domain BF38_1227 PF01680 SOR/SNZ family BF38_1228 PF01174 SNO glutamine amidotransferase family BF38_1229 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF38_1229 PF02403 Seryl-tRNA synthetase N-terminal domain BF38_123 PF01497 Periplasmic binding protein BF38_1232 PF01712 Deoxynucleoside kinase BF38_1233 PF01712 Deoxynucleoside kinase BF38_1234 PF00857 Isochorismatase family BF38_1235 PF14437 MafB19-like deaminase BF38_1236 PF12169 DNA polymerase III subunits gamma and tau domain III BF38_1237 PF02575 YbaB/EbfC DNA-binding family BF38_1238 PF02132 RecR protein BF38_1238 PF13662 Toprim domain BF38_1239 PF10704 Protein of unknown function (DUF2508) BF38_124 PF14143 YrhC-like protein BF38_1240 PF07441 SigmaK-factor processing regulatory protein BofA BF38_1248 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF38_1248 PF01276 Orn/Lys/Arg decarboxylase, major domain BF38_1249 PF02223 Thymidylate kinase BF38_125 PF00171 Aldehyde dehydrogenase family BF38_125 PF00465 Iron-containing alcohol dehydrogenase BF38_1250 PF09115 DNA polymerase III, delta subunit, C terminal BF38_1251 PF04468 PSP1 C-terminal conserved region BF38_1252 PF06156 Initiation control protein YabA BF38_1253 PF05175 Methyltransferase small domain BF38_1254 PF01541 GIY-YIG catalytic domain BF38_1255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF38_1256 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF38_1256 PF18277 AbrB C-terminal domain BF38_1257 PF09334 tRNA synthetases class I (M) BF38_1257 PF01588 Putative tRNA binding domain BF38_1257 PF08264 Anticodon-binding domain of tRNA BF38_1258 PF01026 TatD related DNase BF38_1259 PF13662 Toprim domain BF38_1259 PF13331 Domain of unknown function (DUF4093) BF38_126 PF01053 Cys/Met metabolism PLP-dependent enzyme BF38_1260 PF00398 Ribosomal RNA adenine dimethylase BF38_1261 PF05582 YabG peptidase U57 BF38_1262 PF06257 Biofilm formation stimulator VEG BF38_1263 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF38_1264 PF08544 GHMP kinases C terminal BF38_1264 PF00288 GHMP kinases N terminal domain BF38_1265 PF00156 Phosphoribosyl transferase domain BF38_1265 PF09182 Bacterial purine repressor, N-terminal BF38_1266 PF01042 Endoribonuclease L-PSP BF38_1267 PF04026 SpoVG BF38_1268 PF00483 Nucleotidyl transferase BF38_1268 PF00132 Bacterial transferase hexapeptide (six repeats) BF38_1269 PF14572 Phosphoribosyl synthetase-associated domain BF38_1269 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BF38_127 PF00291 Pyridoxal-phosphate dependent enzyme BF38_1270 PF01195 Peptidyl-tRNA hydrolase BF38_1272 PF00271 Helicase conserved C-terminal domain BF38_1272 PF02559 CarD-like/TRCF domain BF38_1272 PF00270 DEAD/DEAH box helicase BF38_1272 PF03461 TRCF domain BF38_1272 PF17757 UvrB interaction domain BF38_1273 PF00271 Helicase conserved C-terminal domain BF38_1273 PF03461 TRCF domain BF38_1273 PF17757 UvrB interaction domain BF38_1273 PF00270 DEAD/DEAH box helicase BF38_1273 PF02559 CarD-like/TRCF domain BF38_1274 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF38_1274 PF15714 Stage V sporulation protein T C-terminal, transcription factor BF38_1275 PF01943 Polysaccharide biosynthesis protein BF38_1275 PF14667 Polysaccharide biosynthesis C-terminal domain BF38_1276 PF03819 MazG nucleotide pyrophosphohydrolase domain BF38_1276 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF38_1277 PF01479 S4 domain BF38_1278 PF07873 YabP family BF38_1279 PF09578 Spore cortex protein YabQ (Spore_YabQ) BF38_128 PF01048 Phosphorylase superfamily BF38_1281 PF00575 S1 RNA binding domain BF38_1284 PF07228 Stage II sporulation protein E (SpoIIE) BF38_1285 PF11734 TilS substrate C-terminal domain BF38_1285 PF01171 PP-loop family BF38_1285 PF09179 TilS substrate binding domain BF38_1287 PF06480 FtsH Extracellular BF38_1287 PF01434 Peptidase family M41 BF38_1287 PF00004 ATPase family associated with various cellular activities (AAA) BF38_1287 PF17862 AAA+ lid domain BF38_1288 PF03309 Type III pantothenate kinase BF38_1289 PF01430 Hsp33 protein BF38_129 PF08241 Methyltransferase domain BF38_1290 PF00291 Pyridoxal-phosphate dependent enzyme BF38_1291 PF04715 Anthranilate synthase component I, N terminal region BF38_1291 PF00425 chorismate binding enzyme BF38_1292 PF00117 Glutamine amidotransferase class-I BF38_1293 PF01063 Amino-transferase class IV BF38_1294 PF00809 Pterin binding enzyme BF38_1295 PF02152 Dihydroneopterin aldolase BF38_1296 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BF38_1297 PF01381 Helix-turn-helix BF38_1298 PF01207 Dihydrouridine synthase (Dus) BF38_1299 PF00152 tRNA synthetases class II (D, K and N) BF38_1299 PF01336 OB-fold nucleic acid binding domain BF38_13 PF01053 Cys/Met metabolism PLP-dependent enzyme BF38_1317 PF17727 CtsR C-terminal dimerization domain BF38_1317 PF05848 CtsR N-terminal HTH domain BF38_1318 PF02151 UvrB/uvrC motif BF38_1319 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BF38_132 PF03717 Penicillin-binding Protein dimerisation domain BF38_132 PF00905 Penicillin binding protein transpeptidase domain BF38_1320 PF00004 ATPase family associated with various cellular activities (AAA) BF38_1320 PF10431 C-terminal, D2-small domain, of ClpB protein BF38_1320 PF07724 AAA domain (Cdc48 subfamily) BF38_1320 PF17871 AAA lid domain BF38_1320 PF02861 Clp amino terminal domain, pathogenicity island component BF38_1321 PF18073 Rubredoxin metal binding domain BF38_1322 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF38_1322 PF10635 DisA bacterial checkpoint controller linker region BF38_1324 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BF38_1325 PF02542 YgbB family BF38_1326 PF00749 tRNA synthetases class I (E and Q), catalytic domain BF38_1327 PF00132 Bacterial transferase hexapeptide (six repeats) BF38_1327 PF06426 Serine acetyltransferase, N-terminal BF38_1328 PF01406 tRNA synthetases class I (C) catalytic domain BF38_1328 PF09190 DALR domain BF38_1329 PF00636 Ribonuclease III domain BF38_133 PF01272 Transcription elongation factor, GreA/GreB, C-term BF38_133 PF03449 Transcription elongation factor, N-terminal BF38_1330 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF38_1330 PF00588 SpoU rRNA Methylase family BF38_1331 PF05991 YacP-like NYN domain BF38_1332 PF08281 Sigma-70, region 4 BF38_1332 PF04542 Sigma-70 region 2 BF38_1333 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BF38_1334 PF02357 Transcription termination factor nusG BF38_1334 PF00467 KOW motif BF38_1335 PF00298 Ribosomal protein L11, RNA binding domain BF38_1335 PF03946 Ribosomal protein L11, N-terminal domain BF38_1336 PF00687 Ribosomal protein L1p/L10e family BF38_1337 PF00466 Ribosomal protein L10 BF38_1338 PF00542 Ribosomal protein L7/L12 C-terminal domain BF38_1338 PF16320 Ribosomal protein L7/L12 dimerisation domain BF38_1339 PF05175 Methyltransferase small domain BF38_134 PF00485 Phosphoribulokinase / Uridine kinase family BF38_1340 PF10385 RNA polymerase beta subunit external 1 domain BF38_1340 PF00562 RNA polymerase Rpb2, domain 6 BF38_1340 PF04560 RNA polymerase Rpb2, domain 7 BF38_1340 PF04565 RNA polymerase Rpb2, domain 3 BF38_1340 PF04561 RNA polymerase Rpb2, domain 2 BF38_1340 PF04563 RNA polymerase beta subunit BF38_1341 PF00623 RNA polymerase Rpb1, domain 2 BF38_1341 PF04983 RNA polymerase Rpb1, domain 3 BF38_1341 PF05000 RNA polymerase Rpb1, domain 4 BF38_1341 PF04998 RNA polymerase Rpb1, domain 5 BF38_1341 PF04997 RNA polymerase Rpb1, domain 1 BF38_1342 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF38_1343 PF00164 Ribosomal protein S12/S23 BF38_1344 PF00177 Ribosomal protein S7p/S5e BF38_1345 PF03764 Elongation factor G, domain IV BF38_1345 PF00009 Elongation factor Tu GTP binding domain BF38_1345 PF03144 Elongation factor Tu domain 2 BF38_1345 PF00679 Elongation factor G C-terminus BF38_1345 PF14492 Elongation Factor G, domain II BF38_1346 PF03143 Elongation factor Tu C-terminal domain BF38_1346 PF03144 Elongation factor Tu domain 2 BF38_1346 PF00009 Elongation factor Tu GTP binding domain BF38_1347 PF00338 Ribosomal protein S10p/S20e BF38_1348 PF00297 Ribosomal protein L3 BF38_1349 PF00573 Ribosomal protein L4/L1 family BF38_1350 PF00276 Ribosomal protein L23 BF38_1351 PF03947 Ribosomal Proteins L2, C-terminal domain BF38_1351 PF00181 Ribosomal Proteins L2, RNA binding domain BF38_1352 PF00203 Ribosomal protein S19 BF38_1353 PF00237 Ribosomal protein L22p/L17e BF38_1354 PF07650 KH domain BF38_1354 PF00189 Ribosomal protein S3, C-terminal domain BF38_1355 PF00252 Ribosomal protein L16p/L10e BF38_1356 PF00831 Ribosomal L29 protein BF38_1357 PF00366 Ribosomal protein S17 BF38_1358 PF00238 Ribosomal protein L14p/L23e BF38_1359 PF00467 KOW motif BF38_1359 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BF38_1360 PF00673 ribosomal L5P family C-terminus BF38_1360 PF00281 Ribosomal protein L5 BF38_1361 PF00253 Ribosomal protein S14p/S29e BF38_1362 PF00410 Ribosomal protein S8 BF38_1363 PF00347 Ribosomal protein L6 BF38_1364 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BF38_1365 PF00333 Ribosomal protein S5, N-terminal domain BF38_1365 PF03719 Ribosomal protein S5, C-terminal domain BF38_1366 PF00327 Ribosomal protein L30p/L7e BF38_1367 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BF38_1368 PF00344 SecY translocase BF38_1369 PF05191 Adenylate kinase, active site lid BF38_1370 PF00557 Metallopeptidase family M24 BF38_1371 PF01176 Translation initiation factor 1A / IF-1 BF38_1372 PF00444 Ribosomal protein L36 BF38_1373 PF00416 Ribosomal protein S13/S18 BF38_1374 PF00411 Ribosomal protein S11 BF38_1375 PF01000 RNA polymerase Rpb3/RpoA insert domain BF38_1375 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BF38_1375 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BF38_1376 PF01196 Ribosomal protein L17 BF38_1377 PF00005 ABC transporter BF38_1378 PF00005 ABC transporter BF38_1379 PF02361 Cobalt transport protein BF38_138 PF02618 YceG-like family BF38_1380 PF01416 tRNA pseudouridine synthase BF38_1381 PF00572 Ribosomal protein L13 BF38_1382 PF00380 Ribosomal protein S9/S16 BF38_1384 PF01520 N-acetylmuramoyl-L-alanine amidase BF38_1385 PF10609 NUBPL iron-transfer P-loop NTPase BF38_1386 PF17898 Spore germination GerD central core domain BF38_1387 PF14089 KinB-signalling pathway activation in sporulation BF38_1388 PF01522 Polysaccharide deacetylase BF38_139 PF06949 Protein of unknown function (DUF1292) BF38_14 PF01053 Cys/Met metabolism PLP-dependent enzyme BF38_140 PF03652 Holliday junction resolvase BF38_1403 PF02595 Glycerate kinase family BF38_1404 PF00491 Arginase family BF38_1405 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF38_1406 PF07949 YbbR-like protein BF38_1407 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF38_1407 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF38_1407 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF38_1407 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF38_1408 PF01380 SIS domain BF38_1409 PF00561 alpha/beta hydrolase fold BF38_141 PF06135 IreB regulatory phosphoprotein BF38_1410 PF07729 FCD domain BF38_1410 PF00392 Bacterial regulatory proteins, gntR family BF38_1411 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF38_1411 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF38_1412 PF02447 GntP family permease BF38_1413 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF38_1413 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF38_1414 PF00326 Prolyl oligopeptidase family BF38_1414 PF07676 WD40-like Beta Propeller Repeat BF38_1417 PF13333 Integrase core domain BF38_1417 PF00665 Integrase core domain BF38_1417 PF13276 HTH-like domain BF38_142 PF01411 tRNA synthetases class II (A) BF38_142 PF02272 DHHA1 domain BF38_142 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF38_1423 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1424 PF09383 NIL domain BF38_1424 PF00005 ABC transporter BF38_1425 PF03180 NLPA lipoprotein BF38_1428 PF01565 FAD binding domain BF38_1429 PF07690 Major Facilitator Superfamily BF38_1431 PF07690 Major Facilitator Superfamily BF38_1434 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1435 PF12911 N-terminal TM domain of oligopeptide transport permease C BF38_1435 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1436 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_1436 PF00005 ABC transporter BF38_1437 PF00005 ABC transporter BF38_1437 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_1438 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_144 PF01594 AI-2E family transporter BF38_1440 PF12833 Helix-turn-helix domain BF38_1442 PF00440 Bacterial regulatory proteins, tetR family BF38_1444 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_1445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_1446 PF00248 Aldo/keto reductase family BF38_1447 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF38_1447 PF03807 NADP oxidoreductase coenzyme F420-dependent BF38_1448 PF04973 Nicotinamide mononucleotide transporter BF38_1449 PF06800 Sugar transport protein BF38_1450 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1452 PF12727 PBP superfamily domain BF38_1452 PF12728 Helix-turn-helix domain BF38_1455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_1455 PF03466 LysR substrate binding domain BF38_1456 PF00892 EamA-like transporter family BF38_1457 PF14142 YrzO-like protein BF38_1459 PF01553 Acyltransferase BF38_1461 PF00356 Bacterial regulatory proteins, lacI family BF38_1461 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF38_1463 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_1463 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_1466 PF01026 TatD related DNase BF38_1467 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BF38_1471 PF16326 ABC transporter C-terminal domain BF38_1471 PF00005 ABC transporter BF38_1471 PF12848 ABC transporter BF38_1472 PF07730 Histidine kinase BF38_1473 PF00196 Bacterial regulatory proteins, luxR family BF38_1473 PF00072 Response regulator receiver domain BF38_1474 PF00005 ABC transporter BF38_1479 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_148 PF14490 Helix-hairpin-helix containing domain BF38_148 PF13538 UvrD-like helicase C-terminal domain BF38_148 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BF38_1480 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1481 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1481 PF12911 N-terminal TM domain of oligopeptide transport permease C BF38_1482 PF00005 ABC transporter BF38_1482 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_1483 PF00005 ABC transporter BF38_1483 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_1489 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_1490 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF38_1493 PF01820 D-ala D-ala ligase N-terminus BF38_1493 PF07478 D-ala D-ala ligase C-terminus BF38_1494 PF08245 Mur ligase middle domain BF38_1494 PF02875 Mur ligase family, glutamate ligase domain BF38_1494 PF01225 Mur ligase family, catalytic domain BF38_1495 PF00271 Helicase conserved C-terminal domain BF38_1495 PF00270 DEAD/DEAH box helicase BF38_1496 PF01694 Rhomboid family BF38_1497 PF03851 UV-endonuclease UvdE BF38_1498 PF01648 4'-phosphopantetheinyl transferase superfamily BF38_1500 PF01168 Alanine racemase, N-terminal domain BF38_1500 PF00842 Alanine racemase, C-terminal domain BF38_1501 PF01402 Ribbon-helix-helix protein, copG family BF38_1502 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BF38_1503 PF16921 Tex protein YqgF-like domain BF38_1503 PF09371 Tex-like protein N-terminal domain BF38_1503 PF00575 S1 RNA binding domain BF38_1503 PF17674 HHH domain BF38_1504 PF10263 SprT-like family BF38_1504 PF17283 SprT-like zinc ribbon domain BF38_151 PF00266 Aminotransferase class-V BF38_152 PF02082 Transcriptional regulator BF38_1522 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BF38_1523 PF00814 Glycoprotease family BF38_1524 PF00583 Acetyltransferase (GNAT) family BF38_1525 PF00814 Glycoprotease family BF38_1526 PF12848 ABC transporter BF38_1526 PF00005 ABC transporter BF38_1526 PF16326 ABC transporter C-terminal domain BF38_1527 PF02629 CoA binding domain BF38_1527 PF06971 Putative DNA-binding protein N-terminus BF38_1529 PF02517 CPBP intramembrane metalloprotease BF38_153 PF16193 AAA C-terminal domain BF38_153 PF12002 MgsA AAA+ ATPase C terminal BF38_153 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF38_1530 PF00166 Chaperonin 10 Kd subunit BF38_1531 PF00118 TCP-1/cpn60 chaperonin family BF38_1532 PF00958 GMP synthase C terminal domain BF38_1532 PF02540 NAD synthase BF38_1532 PF00117 Glutamine amidotransferase class-I BF38_1533 PF00860 Permease family BF38_1534 PF00072 Response regulator receiver domain BF38_1534 PF00486 Transcriptional regulatory protein, C terminal BF38_1535 PF00989 PAS fold BF38_1535 PF00512 His Kinase A (phospho-acceptor) domain BF38_1535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1535 PF16736 Single Cache-like BF38_1541 PF01323 DSBA-like thioredoxin domain BF38_1546 PF14307 Glycosyltransferase WbsX BF38_1546 PF05045 Rhamnan synthesis protein F BF38_1549 PF08241 Methyltransferase domain BF38_155 PF00899 ThiF family BF38_1553 PF00535 Glycosyl transferase family 2 BF38_1558 PF02673 Bacitracin resistance protein BacA BF38_156 PF00152 tRNA synthetases class II (D, K and N) BF38_156 PF01336 OB-fold nucleic acid binding domain BF38_156 PF02938 GAD domain BF38_1560 PF00005 ABC transporter BF38_1561 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1561 PF00512 His Kinase A (phospho-acceptor) domain BF38_1562 PF00072 Response regulator receiver domain BF38_1562 PF00486 Transcriptional regulatory protein, C terminal BF38_1567 PF00892 EamA-like transporter family BF38_157 PF03129 Anticodon binding domain BF38_157 PF13393 Histidyl-tRNA synthetase BF38_1573 PF00731 AIR carboxylase BF38_1574 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BF38_1574 PF02222 ATP-grasp domain BF38_1575 PF10397 Adenylosuccinate lyase C-terminus BF38_1575 PF00206 Lyase BF38_1576 PF01259 SAICAR synthetase BF38_1577 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BF38_1579 PF02769 AIR synthase related protein, C-terminal domain BF38_1579 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BF38_1579 PF00586 AIR synthase related protein, N-terminal domain BF38_1580 PF00156 Phosphoribosyl transferase domain BF38_1581 PF02769 AIR synthase related protein, C-terminal domain BF38_1581 PF00586 AIR synthase related protein, N-terminal domain BF38_1582 PF00551 Formyl transferase BF38_1583 PF01808 AICARFT/IMPCHase bienzyme BF38_1583 PF02142 MGS-like domain BF38_1584 PF02844 Phosphoribosylglycinamide synthetase, N domain BF38_1584 PF02843 Phosphoribosylglycinamide synthetase, C domain BF38_1584 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BF38_1588 PF01884 PcrB family BF38_1589 PF00580 UvrD/REP helicase N-terminal domain BF38_1589 PF13361 UvrD-like helicase C-terminal domain BF38_1590 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BF38_1590 PF03120 NAD-dependent DNA ligase OB-fold domain BF38_1590 PF01653 NAD-dependent DNA ligase adenylation domain BF38_1590 PF12826 Helix-hairpin-helix motif BF38_1590 PF00533 BRCA1 C Terminus (BRCT) domain BF38_1591 PF07537 CamS sex pheromone cAM373 precursor BF38_1592 PF01925 Sulfite exporter TauE/SafE BF38_1593 PF00171 Aldehyde dehydrogenase family BF38_1595 PF00857 Isochorismatase family BF38_1596 PF00005 ABC transporter BF38_1596 PF09383 NIL domain BF38_1597 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1598 PF03180 NLPA lipoprotein BF38_16 PF01022 Bacterial regulatory protein, arsR family BF38_160 PF02580 D-Tyr-tRNA(Tyr) deacylase BF38_1601 PF17886 HSP20-like domain found in ArsA BF38_1601 PF02374 Anion-transporting ATPase BF38_1602 PF01047 MarR family BF38_1603 PF05360 yiaA/B two helix domain BF38_1604 PF02686 Glu-tRNAGln amidotransferase C subunit BF38_1605 PF01425 Amidase BF38_1606 PF02934 GatB/GatE catalytic domain BF38_1606 PF02637 GatB domain BF38_1607 PF00781 Diacylglycerol kinase catalytic domain BF38_1608 PF13419 Haloacid dehalogenase-like hydrolase BF38_1609 PF00202 Aminotransferase class-III BF38_161 PF13291 ACT domain BF38_161 PF02824 TGS domain BF38_161 PF04607 Region found in RelA / SpoT proteins BF38_1610 PF00158 Sigma-54 interaction domain BF38_1611 PF00171 Aldehyde dehydrogenase family BF38_1612 PF00893 Small Multidrug Resistance protein BF38_1613 PF02073 Thermophilic metalloprotease (M29) BF38_1616 PF07662 Na+ dependent nucleoside transporter C-terminus BF38_1616 PF07670 Nucleoside recognition BF38_1616 PF01773 Na+ dependent nucleoside transporter N-terminus BF38_1617 PF01938 TRAM domain BF38_1617 PF05958 tRNA (Uracil-5-)-methyltransferase BF38_1617 PF02475 Met-10+ like-protein BF38_1618 PF01207 Dihydrouridine synthase (Dus) BF38_162 PF00156 Phosphoribosyl transferase domain BF38_1620 PF07308 Protein of unknown function (DUF1456) BF38_1623 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF38_1623 PF13378 Enolase C-terminal domain-like BF38_1626 PF07687 Peptidase dimerisation domain BF38_1626 PF01546 Peptidase family M20/M25/M40 BF38_1628 PF13192 Thioredoxin domain BF38_1628 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_1629 PF00578 AhpC/TSA family BF38_163 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BF38_163 PF01368 DHH family BF38_163 PF17768 RecJ OB domain BF38_163 PF02272 DHHA1 domain BF38_1630 PF01636 Phosphotransferase enzyme family BF38_1632 PF00596 Class II Aldolase and Adducin N-terminal domain BF38_1633 PF01032 FecCD transport family BF38_1634 PF01032 FecCD transport family BF38_1635 PF01497 Periplasmic binding protein BF38_1636 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_1638 PF12728 Helix-turn-helix domain BF38_164 PF16916 Dimerisation domain of Zinc Transporter BF38_164 PF01545 Cation efflux family BF38_1644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1644 PF00512 His Kinase A (phospho-acceptor) domain BF38_1644 PF00989 PAS fold BF38_1644 PF13188 PAS domain BF38_1644 PF13426 PAS domain BF38_1648 PF10127 RNA repair pathway DNA polymerase beta family BF38_165 PF02355 Protein export membrane protein BF38_165 PF07549 SecD/SecF GG Motif BF38_1651 PF00355 Rieske [2Fe-2S] domain BF38_1651 PF01266 FAD dependent oxidoreductase BF38_1653 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1654 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF38_1655 PF00005 ABC transporter BF38_1656 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_1656 PF00672 HAMP domain BF38_1656 PF02743 Cache domain BF38_1657 PF02863 Arginine repressor, C-terminal domain BF38_1657 PF01316 Arginine repressor, DNA binding domain BF38_1659 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF38_1659 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF38_166 PF13797 Post-transcriptional regulator BF38_1660 PF13520 Amino acid permease BF38_1661 PF00696 Amino acid kinase family BF38_1664 PF00128 Alpha amylase, catalytic domain BF38_1664 PF16657 Maltogenic Amylase, C-terminal domain BF38_1665 PF02378 Phosphotransferase system, EIIC BF38_1665 PF00367 phosphotransferase system, EIIB BF38_1665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF38_1666 PF03372 Endonuclease/Exonuclease/phosphatase family BF38_1667 PF01061 ABC-2 type transporter BF38_1668 PF01131 DNA topoisomerase BF38_1668 PF01751 Toprim domain BF38_1669 PF02110 Hydroxyethylthiazole kinase family BF38_167 PF14667 Polysaccharide biosynthesis C-terminal domain BF38_167 PF01943 Polysaccharide biosynthesis protein BF38_1670 PF02581 Thiamine monophosphate synthase BF38_1671 PF03605 Anaerobic c4-dicarboxylate membrane transporter BF38_1672 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_1672 PF00672 HAMP domain BF38_1673 PF01910 Thiamine-binding protein BF38_1674 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1676 PF00005 ABC transporter BF38_1677 PF12848 ABC transporter BF38_1677 PF00005 ABC transporter BF38_1678 PF00041 Fibronectin type III domain BF38_1678 PF00704 Glycosyl hydrolases family 18 BF38_168 PF04239 Protein of unknown function (DUF421) BF38_1684 PF08360 QacR-like protein, C-terminal region BF38_1684 PF00440 Bacterial regulatory proteins, tetR family BF38_1688 PF11700 Vacuole effluxer Atg22 like BF38_1691 PF03129 Anticodon binding domain BF38_1691 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF38_1691 PF09180 Prolyl-tRNA synthetase, C-terminal BF38_1693 PF00480 ROK family BF38_1694 PF02342 TerD domain BF38_1695 PF02342 TerD domain BF38_1696 PF02342 TerD domain BF38_1697 PF03741 Integral membrane protein TerC family BF38_1698 PF14266 Putative component of 'biosynthetic module' BF38_1699 PF05816 Toxic anion resistance protein (TelA) BF38_170 PF02699 Preprotein translocase subunit BF38_1700 PF00690 Cation transporter/ATPase, N-terminus BF38_1700 PF00689 Cation transporting ATPase, C-terminus BF38_1701 PF06569 Protein of unknown function (DUF1128) BF38_1702 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF38_1704 PF03631 Virulence factor BrkB BF38_1706 PF00892 EamA-like transporter family BF38_1709 PF10502 Signal peptidase, peptidase S26 BF38_171 PF01702 Queuine tRNA-ribosyltransferase BF38_1711 PF09335 SNARE associated Golgi protein BF38_1714 PF16242 Pyridoxamine 5'-phosphate oxidase like BF38_1715 PF01699 Sodium/calcium exchanger protein BF38_1716 PF14167 YfkD-like protein BF38_1717 PF04055 Radical SAM superfamily BF38_1717 PF08756 YfkB-like domain BF38_1719 PF05683 Fumarase C-terminus BF38_1719 PF05681 Fumarate hydratase (Fumerase) BF38_172 PF02547 Queuosine biosynthesis protein BF38_1720 PF01522 Polysaccharide deacetylase BF38_1721 PF00730 HhH-GPD superfamily base excision DNA repair protein BF38_1722 PF05958 tRNA (Uracil-5-)-methyltransferase BF38_1722 PF01938 TRAM domain BF38_1723 PF01416 tRNA pseudouridine synthase BF38_1725 PF01546 Peptidase family M20/M25/M40 BF38_1725 PF07687 Peptidase dimerisation domain BF38_173 PF11146 Protein of unknown function (DUF2905) BF38_1730 PF04960 Glutaminase BF38_1731 PF02378 Phosphotransferase system, EIIC BF38_1731 PF00367 phosphotransferase system, EIIB BF38_1732 PF00144 Beta-lactamase BF38_1735 PF00535 Glycosyl transferase family 2 BF38_1736 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF38_1736 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF38_1736 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF38_1737 PF00551 Formyl transferase BF38_1737 PF02911 Formyl transferase, C-terminal domain BF38_1737 PF01370 NAD dependent epimerase/dehydratase family BF38_1738 PF00535 Glycosyl transferase family 2 BF38_1739 PF02901 Pyruvate formate lyase-like BF38_1739 PF01228 Glycine radical BF38_174 PF17864 RuvB AAA lid domain BF38_174 PF05491 RuvB C-terminal winged helix domain BF38_174 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF38_1740 PF04055 Radical SAM superfamily BF38_1741 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BF38_1741 PF04101 Glycosyltransferase family 28 C-terminal domain BF38_1744 PF01979 Amidohydrolase family BF38_1745 PF08338 Domain of unknown function (DUF1731) BF38_1745 PF01370 NAD dependent epimerase/dehydratase family BF38_1746 PF02631 RecX family BF38_1749 PF08176 Small acid-soluble spore protein K family BF38_175 PF07499 RuvA, C-terminal domain BF38_175 PF01330 RuvA N terminal domain BF38_1750 PF14043 WVELL protein BF38_1751 PF04307 LexA-binding, inner membrane-associated putative hydrolase BF38_1752 PF00730 HhH-GPD superfamily base excision DNA repair protein BF38_1752 PF14815 NUDIX domain BF38_1754 PF04259 Small, acid-soluble spore protein, gamma-type BF38_1755 PF14182 YgaB-like protein BF38_1756 PF04167 Protein of unknown function (DUF402) BF38_1757 PF00005 ABC transporter BF38_1757 PF00664 ABC transporter transmembrane region BF38_1758 PF06081 Aromatic acid exporter family member 1 BF38_1759 PF00310 Glutamine amidotransferases class-II BF38_1759 PF01493 GXGXG motif BF38_1759 PF01645 Conserved region in glutamate synthase BF38_1759 PF04898 Glutamate synthase central domain BF38_176 PF01497 Periplasmic binding protein BF38_1760 PF00202 Aminotransferase class-III BF38_1761 PF00005 ABC transporter BF38_1764 PF07885 Ion channel BF38_1765 PF00578 AhpC/TSA family BF38_1766 PF01475 Ferric uptake regulator family BF38_1767 PF11023 Zinc-ribbon containing domain BF38_1788 PF01709 Transcriptional regulator BF38_1789 PF00293 NUDIX domain BF38_1789 PF13344 Haloacid dehalogenase-like hydrolase BF38_1790 PF00912 Transglycosylase BF38_1790 PF00905 Penicillin binding protein transpeptidase domain BF38_1791 PF13462 Thioredoxin BF38_1793 PF08331 Domain of unknown function (DUF1730) BF38_1794 PF12671 Putative amidase domain BF38_1795 PF00588 SpoU rRNA Methylase family BF38_1796 PF00563 EAL domain BF38_1796 PF00990 Diguanylate cyclase, GGDEF domain BF38_1796 PF03707 Bacterial signalling protein N terminal repeat BF38_1798 PF08298 PrkA AAA domain BF38_1798 PF06798 PrkA serine protein kinase C-terminal domain BF38_1799 PF04285 Protein of unknown function (DUF444) BF38_18 PF00753 Metallo-beta-lactamase superfamily BF38_180 PF01476 LysM domain BF38_1803 PF02028 BCCT, betaine/carnitine/choline family transporter BF38_1804 PF18496 Collagenase G catalytic helper subdomain BF38_1804 PF08453 Peptidase family M9 N-terminal BF38_1804 PF01752 Collagenase BF38_1806 PF01145 SPFH domain / Band 7 family BF38_1806 PF15975 Flotillin BF38_1807 PF02743 Cache domain BF38_1807 PF00672 HAMP domain BF38_1807 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_1808 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF38_1808 PF17203 Single cache domain 3 BF38_1808 PF00989 PAS fold BF38_1808 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1809 PF12431 Transcriptional regulator BF38_1809 PF00072 Response regulator receiver domain BF38_181 PF02445 Quinolinate synthetase A protein BF38_1810 PF03600 Citrate transporter BF38_1814 PF04309 Glycerol-3-phosphate responsive antiterminator BF38_1815 PF00005 ABC transporter BF38_1815 PF17912 MalK OB fold domain BF38_1816 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1817 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1818 PF13416 Bacterial extracellular solute-binding protein BF38_1819 PF00149 Calcineurin-like phosphoesterase BF38_182 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BF38_182 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BF38_1820 PF00072 Response regulator receiver domain BF38_1820 PF00486 Transcriptional regulatory protein, C terminal BF38_1821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1821 PF00512 His Kinase A (phospho-acceptor) domain BF38_1823 PF13529 Peptidase_C39 like family BF38_1824 PF00672 HAMP domain BF38_1824 PF02743 Cache domain BF38_1824 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_1825 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF38_1825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1825 PF17203 Single cache domain 3 BF38_1825 PF00989 PAS fold BF38_1826 PF00072 Response regulator receiver domain BF38_1827 PF03390 2-hydroxycarboxylate transporter family BF38_1828 PF03949 Malic enzyme, NAD binding domain BF38_1828 PF00390 Malic enzyme, N-terminal domain BF38_183 PF02910 Fumarate reductase flavoprotein C-term BF38_183 PF00890 FAD binding domain BF38_1830 PF00892 EamA-like transporter family BF38_1831 PF00392 Bacterial regulatory proteins, gntR family BF38_1831 PF00155 Aminotransferase class I and II BF38_1833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1833 PF18698 Histidine kinase sensor domain BF38_1833 PF00672 HAMP domain BF38_1833 PF00989 PAS fold BF38_1833 PF00512 His Kinase A (phospho-acceptor) domain BF38_1834 PF00486 Transcriptional regulatory protein, C terminal BF38_1834 PF00072 Response regulator receiver domain BF38_1836 PF00583 Acetyltransferase (GNAT) family BF38_1836 PF13508 Acetyltransferase (GNAT) domain BF38_1837 PF02634 FdhD/NarQ family BF38_1838 PF00037 4Fe-4S binding domain BF38_1838 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF38_1838 PF01568 Molydopterin dinucleotide binding domain BF38_1838 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF38_1838 PF00384 Molybdopterin oxidoreductase BF38_1839 PF07849 Protein of unknown function (DUF1641) BF38_184 PF00266 Aminotransferase class-V BF38_1841 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF38_1841 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF38_1842 PF13520 Amino acid permease BF38_1843 PF01022 Bacterial regulatory protein, arsR family BF38_1844 PF00403 Heavy-metal-associated domain BF38_1845 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BF38_1845 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BF38_1845 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BF38_1848 PF07504 Fungalysin/Thermolysin Propeptide Motif BF38_1848 PF03413 Peptidase propeptide and YPEB domain BF38_1848 PF01447 Thermolysin metallopeptidase, catalytic domain BF38_1848 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF38_185 PF02829 3H domain BF38_185 PF08279 HTH domain BF38_1852 PF04294 VanW like protein BF38_1853 PF03816 Cell envelope-related transcriptional attenuator domain BF38_1854 PF01773 Na+ dependent nucleoside transporter N-terminus BF38_1854 PF07662 Na+ dependent nucleoside transporter C-terminus BF38_1855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_1856 PF00571 CBS domain BF38_1856 PF03471 Transporter associated domain BF38_1856 PF01595 Cyclin M transmembrane N-terminal domain BF38_1857 PF10415 Fumarase C C-terminus BF38_1857 PF00206 Lyase BF38_1858 PF02652 L-lactate permease BF38_1859 PF01022 Bacterial regulatory protein, arsR family BF38_186 PF03473 MOSC domain BF38_186 PF03475 3-alpha domain BF38_1860 PF08141 Small acid-soluble spore protein H family BF38_1861 PF00854 POT family BF38_1862 PF01497 Periplasmic binding protein BF38_1863 PF01032 FecCD transport family BF38_1864 PF01032 FecCD transport family BF38_1865 PF00005 ABC transporter BF38_1866 PF00155 Aminotransferase class I and II BF38_1867 PF01370 NAD dependent epimerase/dehydratase family BF38_1868 PF00156 Phosphoribosyl transferase domain BF38_1869 PF00293 NUDIX domain BF38_1869 PF13344 Haloacid dehalogenase-like hydrolase BF38_187 PF01842 ACT domain BF38_187 PF00800 Prephenate dehydratase BF38_1870 PF00092 von Willebrand factor type A domain BF38_1871 PF07728 AAA domain (dynein-related subfamily) BF38_1872 PF13091 PLD-like domain BF38_1872 PF13396 Phospholipase_D-nuclease N-terminal BF38_1875 PF00563 EAL domain BF38_1875 PF03707 Bacterial signalling protein N terminal repeat BF38_1875 PF00990 Diguanylate cyclase, GGDEF domain BF38_1876 PF13520 Amino acid permease BF38_1877 PF07702 UTRA domain BF38_1877 PF00392 Bacterial regulatory proteins, gntR family BF38_1878 PF00367 phosphotransferase system, EIIB BF38_1878 PF02378 Phosphotransferase system, EIIC BF38_1879 PF16657 Maltogenic Amylase, C-terminal domain BF38_1879 PF00128 Alpha amylase, catalytic domain BF38_188 PF02687 FtsX-like permease family BF38_1882 PF03323 Bacillus/Clostridium GerA spore germination protein BF38_1884 PF01636 Phosphotransferase enzyme family BF38_1885 PF01235 Sodium:alanine symporter family BF38_1886 PF00005 ABC transporter BF38_1887 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF38_1888 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1889 PF00528 Binding-protein-dependent transport system inner membrane component BF38_189 PF02687 FtsX-like permease family BF38_1890 PF00324 Amino acid permease BF38_1895 PF13280 WYL domain BF38_1895 PF08279 HTH domain BF38_1896 PF01872 RibD C-terminal domain BF38_1897 PF00989 PAS fold BF38_1897 PF00672 HAMP domain BF38_1897 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1897 PF18698 Histidine kinase sensor domain BF38_1897 PF00512 His Kinase A (phospho-acceptor) domain BF38_1898 PF00486 Transcriptional regulatory protein, C terminal BF38_1898 PF00072 Response regulator receiver domain BF38_19 PF10958 Protein of unknown function (DUF2759) BF38_190 PF00005 ABC transporter BF38_1900 PF00916 Sulfate permease family BF38_1900 PF01740 STAS domain BF38_1901 PF00582 Universal stress protein family BF38_1903 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_1904 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1905 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1906 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_1906 PF00005 ABC transporter BF38_1907 PF00005 ABC transporter BF38_1907 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_1908 PF07690 Major Facilitator Superfamily BF38_1909 PF01047 MarR family BF38_191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_1910 PF07690 Major Facilitator Superfamily BF38_1911 PF00356 Bacterial regulatory proteins, lacI family BF38_1912 PF00294 pfkB family carbohydrate kinase BF38_1913 PF05025 RbsD / FucU transport protein family BF38_1914 PF00005 ABC transporter BF38_1915 PF02653 Branched-chain amino acid transport system / permease component BF38_1916 PF13407 Periplasmic binding protein domain BF38_1917 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF38_1918 PF05547 Immune inhibitor A peptidase M6 BF38_192 PF00072 Response regulator receiver domain BF38_192 PF00486 Transcriptional regulatory protein, C terminal BF38_1920 PF00107 Zinc-binding dehydrogenase BF38_1920 PF08240 Alcohol dehydrogenase GroES-like domain BF38_1922 PF00882 Zinc dependent phospholipase C BF38_1923 PF03372 Endonuclease/Exonuclease/phosphatase family BF38_1928 PF02673 Bacitracin resistance protein BacA BF38_1929 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_1929 PF02743 Cache domain BF38_1929 PF00672 HAMP domain BF38_193 PF01926 50S ribosome-binding GTPase BF38_193 PF01018 GTP1/OBG BF38_193 PF09269 Domain of unknown function (DUF1967) BF38_1930 PF01476 LysM domain BF38_1930 PF06725 3D domain BF38_1931 PF01381 Helix-turn-helix BF38_1933 PF04203 Sortase domain BF38_1934 PF00854 POT family BF38_1935 PF05525 Branched-chain amino acid transport protein BF38_1938 PF00324 Amino acid permease BF38_1939 PF00860 Permease family BF38_194 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF38_194 PF14682 Sporulation initiation phospho-transferase B, C-terminal BF38_1942 PF13673 Acetyltransferase (GNAT) domain BF38_1944 PF00999 Sodium/hydrogen exchanger family BF38_1944 PF02080 TrkA-C domain BF38_1944 PF02254 TrkA-N domain BF38_1946 PF00510 Cytochrome c oxidase subunit III BF38_1947 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF38_1948 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF38_1949 PF13529 Peptidase_C39 like family BF38_195 PF01016 Ribosomal L27 protein BF38_1950 PF01546 Peptidase family M20/M25/M40 BF38_1950 PF07687 Peptidase dimerisation domain BF38_1951 PF11755 Protein of unknown function (DUF3311) BF38_1952 PF00474 Sodium:solute symporter family BF38_1953 PF03323 Bacillus/Clostridium GerA spore germination protein BF38_1954 PF03845 Spore germination protein BF38_1955 PF05504 Spore germination B3/ GerAC like, C-terminal BF38_1956 PF17910 FeoB cytosolic helical domain BF38_1956 PF07670 Nucleoside recognition BF38_1956 PF02421 Ferrous iron transport protein B BF38_1956 PF07664 Ferrous iron transport protein B C terminus BF38_1957 PF07664 Ferrous iron transport protein B C terminus BF38_1957 PF17910 FeoB cytosolic helical domain BF38_1957 PF02421 Ferrous iron transport protein B BF38_1957 PF07670 Nucleoside recognition BF38_1958 PF04023 FeoA domain BF38_1958 PF07664 Ferrous iron transport protein B C terminus BF38_1958 PF17910 FeoB cytosolic helical domain BF38_1958 PF02421 Ferrous iron transport protein B BF38_1958 PF07670 Nucleoside recognition BF38_1959 PF12849 PBP superfamily domain BF38_196 PF04327 Cysteine protease Prp BF38_1960 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1961 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1963 PF00873 AcrB/AcrD/AcrF family BF38_197 PF00829 Ribosomal prokaryotic L21 protein BF38_198 PF00575 S1 RNA binding domain BF38_198 PF10150 Ribonuclease E/G family BF38_1988 PF00571 CBS domain BF38_199 PF02163 Peptidase family M50 BF38_1991 PF00246 Zinc carboxypeptidase BF38_1991 PF08239 Bacterial SH3 domain BF38_1992 PF03070 TENA/THI-4/PQQC family BF38_1993 PF00005 ABC transporter BF38_1994 PF00528 Binding-protein-dependent transport system inner membrane component BF38_1995 PF09084 NMT1/THI5 like BF38_1996 PF02581 Thiamine monophosphate synthase BF38_1997 PF01266 FAD dependent oxidoreductase BF38_1998 PF02597 ThiS family BF38_1999 PF05690 Thiazole biosynthesis protein ThiG BF38_20 PF00480 ROK family BF38_200 PF01551 Peptidase family M23 BF38_2000 PF00899 ThiF family BF38_2001 PF08543 Phosphomethylpyrimidine kinase BF38_2005 PF03814 Potassium-transporting ATPase A subunit BF38_2007 PF02669 K+-transporting ATPase, c chain BF38_2008 PF02702 Osmosensitive K+ channel His kinase sensor domain BF38_2009 PF07690 Major Facilitator Superfamily BF38_201 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BF38_2010 PF01047 MarR family BF38_2013 PF00860 Permease family BF38_2015 PF03734 L,D-transpeptidase catalytic domain BF38_2015 PF17969 L,D-transpeptidase C-terminal domain BF38_2018 PF00085 Thioredoxin BF38_2019 PF02600 Disulfide bond formation protein DsbB BF38_202 PF03775 Septum formation inhibitor MinC, C-terminal domain BF38_2020 PF14148 YhdB-like protein BF38_2022 PF03845 Spore germination protein BF38_2024 PF03323 Bacillus/Clostridium GerA spore germination protein BF38_2026 PF00881 Nitroreductase family BF38_2027 PF04293 SpoVR like protein BF38_2029 PF00089 Trypsin BF38_2031 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_2031 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF38_2032 PF02583 Metal-sensitive transcriptional repressor BF38_2033 PF01206 Sulfurtransferase TusA BF38_2033 PF00581 Rhodanese-like domain BF38_2034 PF00753 Metallo-beta-lactamase superfamily BF38_2034 PF00581 Rhodanese-like domain BF38_2035 PF01206 Sulfurtransferase TusA BF38_2036 PF00581 Rhodanese-like domain BF38_2038 PF13686 DsrE/DsrF/DrsH-like family BF38_2039 PF01925 Sulfite exporter TauE/SafE BF38_204 PF04085 rod shape-determining protein MreC BF38_2041 PF03816 Cell envelope-related transcriptional attenuator domain BF38_2042 PF02386 Cation transport protein BF38_2043 PF02690 Na+/Pi-cotransporter BF38_2044 PF07690 Major Facilitator Superfamily BF38_2046 PF08279 HTH domain BF38_2046 PF05043 Mga helix-turn-helix domain BF38_2046 PF00874 PRD domain BF38_2046 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF38_2047 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF38_2048 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF38_2049 PF02378 Phosphotransferase system, EIIC BF38_2052 PF06725 3D domain BF38_2052 PF01476 LysM domain BF38_2053 PF12704 MacB-like periplasmic core domain BF38_2053 PF02687 FtsX-like permease family BF38_2054 PF00005 ABC transporter BF38_2056 PF09529 Integral membrane protein (intg_mem_TP0381) BF38_2059 PF05525 Branched-chain amino acid transport protein BF38_206 PF04002 RadC-like JAB domain BF38_2060 PF05067 Manganese containing catalase BF38_2061 PF12652 CotJB protein BF38_2062 PF11007 Spore coat associated protein JA (CotJA) BF38_2065 PF02735 Ku70/Ku80 beta-barrel domain BF38_2067 PF09335 SNARE associated Golgi protein BF38_207 PF02545 Maf-like protein BF38_2074 PF13520 Amino acid permease BF38_2075 PF00999 Sodium/hydrogen exchanger family BF38_2077 PF01380 SIS domain BF38_2077 PF01418 Helix-turn-helix domain, rpiR family BF38_2078 PF01380 SIS domain BF38_2079 PF02378 Phosphotransferase system, EIIC BF38_2079 PF00367 phosphotransferase system, EIIB BF38_2081 PF07681 DoxX BF38_2084 PF00892 EamA-like transporter family BF38_2085 PF01037 Lrp/AsnC ligand binding domain BF38_2087 PF00893 Small Multidrug Resistance protein BF38_2088 PF00893 Small Multidrug Resistance protein BF38_2089 PF17934 Tetracyclin repressor-like, C-terminal domain BF38_2089 PF00440 Bacterial regulatory proteins, tetR family BF38_209 PF08245 Mur ligase middle domain BF38_209 PF02875 Mur ligase family, glutamate ligase domain BF38_2090 PF07690 Major Facilitator Superfamily BF38_2091 PF01638 HxlR-like helix-turn-helix BF38_2093 PF02525 Flavodoxin-like fold BF38_2095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_2095 PF12793 Sugar transport-related sRNA regulator N-term BF38_2096 PF07690 Major Facilitator Superfamily BF38_2098 PF01965 DJ-1/PfpI family BF38_2099 PF00199 Catalase BF38_2099 PF06628 Catalase-related immune-responsive BF38_2099 PF18011 C-terminal domain found in long catalases BF38_21 PF06014 Bacterial protein of unknown function (DUF910) BF38_210 PF00133 tRNA synthetases class I (I, L, M and V) BF38_210 PF10458 Valyl tRNA synthetase tRNA binding arm BF38_210 PF08264 Anticodon-binding domain of tRNA BF38_2101 PF13520 Amino acid permease BF38_2102 PF01177 Asp/Glu/Hydantoin racemase BF38_2104 PF00171 Aldehyde dehydrogenase family BF38_2105 PF00005 ABC transporter BF38_2105 PF00664 ABC transporter transmembrane region BF38_2106 PF00664 ABC transporter transmembrane region BF38_2106 PF00005 ABC transporter BF38_2107 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF38_2108 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2109 PF00005 ABC transporter BF38_2110 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF38_2112 PF14398 YheC/D like ATP-grasp BF38_2114 PF04286 Protein of unknown function (DUF445) BF38_2115 PF06133 Control of competence regulator ComK, YlbF/YmcA BF38_2118 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF38_2118 PF00205 Thiamine pyrophosphate enzyme, central domain BF38_2118 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF38_2119 PF03306 Alpha-acetolactate decarboxylase BF38_212 PF01476 LysM domain BF38_2120 PF02245 Methylpurine-DNA glycosylase (MPG) BF38_2123 PF01510 N-acetylmuramoyl-L-alanine amidase BF38_2123 PF01471 Putative peptidoglycan binding domain BF38_2124 PF04055 Radical SAM superfamily BF38_2125 PF00501 AMP-binding enzyme BF38_2125 PF13193 AMP-binding enzyme C-terminal domain BF38_2127 PF00916 Sulfate permease family BF38_2127 PF01740 STAS domain BF38_213 PF00202 Aminotransferase class-III BF38_2131 PF07517 SecA DEAD-like domain BF38_2131 PF07516 SecA Wing and Scaffold domain BF38_2131 PF01043 SecA preprotein cross-linking domain BF38_2132 PF01943 Polysaccharide biosynthesis protein BF38_2132 PF14667 Polysaccharide biosynthesis C-terminal domain BF38_2134 PF00395 S-layer homology domain BF38_2134 PF02368 Bacterial Ig-like domain (group 2) BF38_2134 PF13205 Bacterial Ig-like domain BF38_2135 PF00395 S-layer homology domain BF38_2137 PF03062 MBOAT, membrane-bound O-acyltransferase family BF38_2138 PF03062 MBOAT, membrane-bound O-acyltransferase family BF38_214 PF00490 Delta-aminolevulinic acid dehydratase BF38_2141 PF00378 Enoyl-CoA hydratase/isomerase BF38_2145 PF05343 M42 glutamyl aminopeptidase BF38_2146 PF01520 N-acetylmuramoyl-L-alanine amidase BF38_2146 PF00395 S-layer homology domain BF38_2148 PF11121 Protein of unknown function (DUF2639) BF38_2149 PF05544 Proline racemase BF38_215 PF02602 Uroporphyrinogen-III synthase HemD BF38_2150 PF02423 Ornithine cyclodeaminase/mu-crystallin family BF38_2151 PF18593 CdiI immunity protein BF38_2155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_2156 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2157 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2157 PF12911 N-terminal TM domain of oligopeptide transport permease C BF38_2158 PF00005 ABC transporter BF38_2158 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_2159 PF00005 ABC transporter BF38_2159 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_216 PF03900 Porphobilinogen deaminase, C-terminal domain BF38_216 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BF38_2162 PF00083 Sugar (and other) transporter BF38_2163 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2163 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF38_2164 PF00072 Response regulator receiver domain BF38_2164 PF12431 Transcriptional regulator BF38_2164 PF08279 HTH domain BF38_2165 PF03401 Tripartite tricarboxylate transporter family receptor BF38_217 PF01578 Cytochrome C assembly protein BF38_2171 PF13476 AAA domain BF38_2173 PF00266 Aminotransferase class-V BF38_218 PF01488 Shikimate / quinate 5-dehydrogenase BF38_218 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BF38_218 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BF38_2180 PF13411 MerR HTH family regulatory protein BF38_2180 PF06445 GyrI-like small molecule binding domain BF38_2183 PF00772 DnaB-like helicase N terminal domain BF38_2183 PF03796 DnaB-like helicase C terminal domain BF38_2186 PF01925 Sulfite exporter TauE/SafE BF38_2188 PF07690 Major Facilitator Superfamily BF38_219 PF01047 MarR family BF38_22 PF01812 5-formyltetrahydrofolate cyclo-ligase family BF38_220 PF02566 OsmC-like protein BF38_2204 PF01066 CDP-alcohol phosphatidyltransferase BF38_221 PF01926 50S ribosome-binding GTPase BF38_2210 PF02733 Dak1 domain BF38_2212 PF02733 Dak1 domain BF38_2214 PF00672 HAMP domain BF38_2214 PF01966 HD domain BF38_2218 PF00395 S-layer homology domain BF38_222 PF02190 ATP-dependent protease La (LON) substrate-binding domain BF38_222 PF00004 ATPase family associated with various cellular activities (AAA) BF38_222 PF05362 Lon protease (S16) C-terminal proteolytic domain BF38_2223 PF11181 Heat induced stress protein YflT BF38_2224 PF05532 CsbD-like BF38_2227 PF01740 STAS domain BF38_2228 PF13581 Histidine kinase-like ATPase domain BF38_2229 PF04545 Sigma-70, region 4 BF38_2229 PF04539 Sigma-70 region 3 BF38_2229 PF04542 Sigma-70 region 2 BF38_223 PF05362 Lon protease (S16) C-terminal proteolytic domain BF38_223 PF00004 ATPase family associated with various cellular activities (AAA) BF38_2231 PF13426 PAS domain BF38_2231 PF07228 Stage II sporulation protein E (SpoIIE) BF38_2232 PF01739 CheR methyltransferase, SAM binding domain BF38_2232 PF03705 CheR methyltransferase, all-alpha domain BF38_2233 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF38_2233 PF00072 Response regulator receiver domain BF38_2233 PF01627 Hpt domain BF38_2233 PF00512 His Kinase A (phospho-acceptor) domain BF38_2233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2238 PF01906 Putative heavy-metal-binding BF38_224 PF07724 AAA domain (Cdc48 subfamily) BF38_224 PF10431 C-terminal, D2-small domain, of ClpB protein BF38_224 PF06689 ClpX C4-type zinc finger BF38_2241 PF08240 Alcohol dehydrogenase GroES-like domain BF38_2241 PF00107 Zinc-binding dehydrogenase BF38_2243 PF11121 Protein of unknown function (DUF2639) BF38_2246 PF00149 Calcineurin-like phosphoesterase BF38_2247 PF13514 AAA domain BF38_2248 PF01336 OB-fold nucleic acid binding domain BF38_2248 PF01966 HD domain BF38_225 PF05697 Bacterial trigger factor protein (TF) BF38_225 PF05698 Bacterial trigger factor protein (TF) C-terminus BF38_225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF38_2251 PF14431 YwqJ-like deaminase BF38_2251 PF14449 Pre-toxin TG BF38_2251 PF04740 LXG domain of WXG superfamily BF38_2254 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_2255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_2256 PF17874 MalT-like TPR region BF38_2256 PF18801 response regulator aspartate phosphatase H, N terminal BF38_2258 PF08386 TAP-like protein BF38_2258 PF00561 alpha/beta hydrolase fold BF38_2262 PF04309 Glycerol-3-phosphate responsive antiterminator BF38_2263 PF00230 Major intrinsic protein BF38_2264 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF38_2264 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF38_2265 PF01266 FAD dependent oxidoreductase BF38_2265 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BF38_2268 PF08281 Sigma-70, region 4 BF38_2268 PF04542 Sigma-70 region 2 BF38_2270 PF01098 Cell cycle protein BF38_2273 PF07690 Major Facilitator Superfamily BF38_2274 PF07690 Major Facilitator Superfamily BF38_2276 PF13538 UvrD-like helicase C-terminal domain BF38_2280 PF01047 MarR family BF38_2281 PF12732 YtxH-like protein BF38_2282 PF01230 HIT domain BF38_2283 PF00005 ABC transporter BF38_2284 PF05975 Bacterial ABC transporter protein EcsB BF38_2285 PF12787 EcsC protein family BF38_2295 PF00440 Bacterial regulatory proteins, tetR family BF38_2295 PF17934 Tetracyclin repressor-like, C-terminal domain BF38_2297 PF03703 Bacterial PH domain BF38_2298 PF03703 Bacterial PH domain BF38_23 PF00471 Ribosomal protein L33 BF38_230 PF08000 Bacterial PH domain BF38_230 PF11724 YvbH-like oligomerisation region BF38_2307 PF03703 Bacterial PH domain BF38_2308 PF03703 Bacterial PH domain BF38_2309 PF03992 Antibiotic biosynthesis monooxygenase BF38_2310 PF00905 Penicillin binding protein transpeptidase domain BF38_2310 PF00912 Transglycosylase BF38_2311 PF01208 Uroporphyrinogen decarboxylase (URO-D) BF38_2318 PF17932 Tetracyclin repressor-like, C-terminal domain BF38_2318 PF00440 Bacterial regulatory proteins, tetR family BF38_2325 PF08279 HTH domain BF38_2325 PF13280 WYL domain BF38_2326 PF00356 Bacterial regulatory proteins, lacI family BF38_2327 PF14149 YhfH-like protein BF38_2328 PF12706 Beta-lactamase superfamily domain BF38_2329 PF03099 Biotin/lipoate A/B protein ligase family BF38_2329 PF10437 Bacterial lipoate protein ligase C-terminus BF38_2331 PF00501 AMP-binding enzyme BF38_2331 PF13193 AMP-binding enzyme C-terminal domain BF38_2333 PF01520 N-acetylmuramoyl-L-alanine amidase BF38_2333 PF00395 S-layer homology domain BF38_2334 PF05593 RHS Repeat BF38_2337 PF05593 RHS Repeat BF38_234 PF12850 Calcineurin-like phosphoesterase superfamily domain BF38_2340 PF07968 Leukocidin/Hemolysin toxin family BF38_2341 PF00149 Calcineurin-like phosphoesterase BF38_2343 PF01966 HD domain BF38_2345 PF08281 Sigma-70, region 4 BF38_2345 PF04542 Sigma-70 region 2 BF38_2346 PF06445 GyrI-like small molecule binding domain BF38_2346 PF12833 Helix-turn-helix domain BF38_2349 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2349 PF00512 His Kinase A (phospho-acceptor) domain BF38_235 PF01725 Ham1 family BF38_2350 PF00486 Transcriptional regulatory protein, C terminal BF38_2350 PF00072 Response regulator receiver domain BF38_2354 PF16491 CAAX prenyl protease N-terminal, five membrane helices BF38_2354 PF01435 Peptidase family M48 BF38_2355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_2355 PF00672 HAMP domain BF38_2355 PF02743 Cache domain BF38_2356 PF00892 EamA-like transporter family BF38_2357 PF03424 Carbohydrate binding domain (family 17/28) BF38_2357 PF00150 Cellulase (glycosyl hydrolase family 5) BF38_2357 PF00395 S-layer homology domain BF38_2359 PF00395 S-layer homology domain BF38_236 PF01138 3' exoribonuclease family, domain 1 BF38_236 PF03725 3' exoribonuclease family, domain 2 BF38_2360 PF01274 Malate synthase BF38_2361 PF00463 Isocitrate lyase family BF38_2363 PF00313 'Cold-shock' DNA-binding domain BF38_2366 PF06338 ComK protein BF38_2368 PF09335 SNARE associated Golgi protein BF38_2369 PF10502 Signal peptidase, peptidase S26 BF38_237 PF10646 Sporulation and spore germination BF38_2370 PF13361 UvrD-like helicase C-terminal domain BF38_2370 PF12705 PD-(D/E)XK nuclease superfamily BF38_2371 PF12705 PD-(D/E)XK nuclease superfamily BF38_2371 PF00580 UvrD/REP helicase N-terminal domain BF38_2371 PF13361 UvrD-like helicase C-terminal domain BF38_2373 PF10676 Spore germination protein gerPA/gerPF BF38_2374 PF10970 Spore germination protein GerPE BF38_2376 PF10737 Spore germination protein GerPC BF38_2377 PF10803 Spore germination GerPB BF38_2378 PF10676 Spore germination protein gerPA/gerPF BF38_2379 PF09388 Spo0E like sporulation regulatory protein BF38_238 PF01177 Asp/Glu/Hydantoin racemase BF38_2380 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF38_2382 PF00202 Aminotransferase class-III BF38_2383 PF07457 Protein of unknown function (DUF1516) BF38_2385 PF00733 Asparagine synthase BF38_2385 PF13537 Glutamine amidotransferase domain BF38_2387 PF06628 Catalase-related immune-responsive BF38_2387 PF00199 Catalase BF38_2388 PF00909 Ammonium Transporter Family BF38_2389 PF00128 Alpha amylase, catalytic domain BF38_239 PF07690 Major Facilitator Superfamily BF38_2391 PF04461 Protein of unknown function (DUF520) BF38_2392 PF13509 S1 domain BF38_2392 PF17783 CvfB-like winged helix domain BF38_2397 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_2397 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_2398 PF12758 Protein of unknown function (DUF3813) BF38_24 PF00483 Nucleotidyl transferase BF38_2401 PF14168 YjzC-like protein BF38_2402 PF10431 C-terminal, D2-small domain, of ClpB protein BF38_2402 PF17871 AAA lid domain BF38_2402 PF02861 Clp amino terminal domain, pathogenicity island component BF38_2402 PF00004 ATPase family associated with various cellular activities (AAA) BF38_2402 PF07724 AAA domain (Cdc48 subfamily) BF38_2406 PF10815 ComZ BF38_2407 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF38_2407 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF38_2408 PF00109 Beta-ketoacyl synthase, N-terminal domain BF38_2408 PF02801 Beta-ketoacyl synthase, C-terminal domain BF38_2409 PF10026 Predicted Zn-dependent protease (DUF2268) BF38_241 PF00440 Bacterial regulatory proteins, tetR family BF38_2410 PF12227 Protein of unknown function (DUF3603) BF38_2411 PF00579 tRNA synthetases class I (W and Y) BF38_2413 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_2414 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2415 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2415 PF12911 N-terminal TM domain of oligopeptide transport permease C BF38_2416 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_2416 PF00005 ABC transporter BF38_2417 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_2417 PF00005 ABC transporter BF38_2418 PF01554 MatE BF38_2419 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_242 PF01965 DJ-1/PfpI family BF38_2421 PF03960 ArsC family BF38_2422 PF03741 Integral membrane protein TerC family BF38_2423 PF05389 Negative regulator of genetic competence (MecA) BF38_2424 PF13396 Phospholipase_D-nuclease N-terminal BF38_2424 PF13091 PLD-like domain BF38_2426 PF01432 Peptidase family M3 BF38_2426 PF08439 Oligopeptidase F BF38_2429 PF01152 Bacterial-like globin BF38_2430 PF01928 CYTH domain BF38_2432 PF04607 Region found in RelA / SpoT proteins BF38_2433 PF01513 ATP-NAD kinase BF38_2434 PF00849 RNA pseudouridylate synthase BF38_2436 PF00149 Calcineurin-like phosphoesterase BF38_2437 PF01098 Cell cycle protein BF38_2438 PF00535 Glycosyl transferase family 2 BF38_2439 PF08241 Methyltransferase domain BF38_244 PF00196 Bacterial regulatory proteins, luxR family BF38_2440 PF05711 Macrocin-O-methyltransferase (TylF) BF38_2442 PF13181 Tetratricopeptide repeat BF38_2442 PF00535 Glycosyl transferase family 2 BF38_2446 PF00483 Nucleotidyl transferase BF38_2447 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BF38_2448 PF16363 GDP-mannose 4,6 dehydratase BF38_2449 PF04321 RmlD substrate binding domain BF38_245 PF00860 Permease family BF38_2453 PF07098 Protein of unknown function (DUF1360) BF38_2456 PF13361 UvrD-like helicase C-terminal domain BF38_2456 PF00580 UvrD/REP helicase N-terminal domain BF38_2457 PF13673 Acetyltransferase (GNAT) domain BF38_2459 PF00756 Putative esterase BF38_2462 PF02368 Bacterial Ig-like domain (group 2) BF38_2463 PF00474 Sodium:solute symporter family BF38_2465 PF00117 Glutamine amidotransferase class-I BF38_2465 PF02885 Glycosyl transferase family, helical bundle domain BF38_2465 PF00591 Glycosyl transferase family, a/b domain BF38_2466 PF00591 Glycosyl transferase family, a/b domain BF38_2466 PF02885 Glycosyl transferase family, helical bundle domain BF38_2467 PF00218 Indole-3-glycerol phosphate synthase BF38_2468 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BF38_2469 PF00291 Pyridoxal-phosphate dependent enzyme BF38_247 PF07969 Amidohydrolase family BF38_2470 PF00290 Tryptophan synthase alpha chain BF38_2472 PF02652 L-lactate permease BF38_2473 PF10042 Uncharacterized conserved protein (DUF2278) BF38_2477 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF38_2477 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_248 PF07969 Amidohydrolase family BF38_2483 PF02817 e3 binding domain BF38_2483 PF00364 Biotin-requiring enzyme BF38_2483 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF38_2484 PF00676 Dehydrogenase E1 component BF38_2484 PF02779 Transketolase, pyrimidine binding domain BF38_2484 PF16870 2-oxoglutarate dehydrogenase C-terminal BF38_2485 PF01381 Helix-turn-helix BF38_249 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_2496 PF13649 Methyltransferase domain BF38_2498 PF07943 Penicillin-binding protein 5, C-terminal domain BF38_2498 PF00768 D-alanyl-D-alanine carboxypeptidase BF38_25 PF01895 PhoU domain BF38_2500 PF12389 Camelysin metallo-endopeptidase BF38_2502 PF12389 Camelysin metallo-endopeptidase BF38_2503 PF01381 Helix-turn-helix BF38_2503 PF08671 Anti-repressor SinI BF38_2504 PF05547 Immune inhibitor A peptidase M6 BF38_2505 PF00171 Aldehyde dehydrogenase family BF38_2506 PF00005 ABC transporter BF38_2506 PF08402 TOBE domain BF38_2507 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2508 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2509 PF13416 Bacterial extracellular solute-binding protein BF38_251 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2511 PF03176 MMPL family BF38_2513 PF00849 RNA pseudouridylate synthase BF38_2513 PF01479 S4 domain BF38_2515 PF00188 Cysteine-rich secretory protein family BF38_2516 PF13183 4Fe-4S dicluster domain BF38_2516 PF02754 Cysteine-rich domain BF38_2517 PF01565 FAD binding domain BF38_2517 PF02913 FAD linked oxidases, C-terminal domain BF38_2518 PF13556 PucR C-terminal helix-turn-helix domain BF38_2518 PF17853 GGDEF-like domain BF38_2518 PF05651 Putative sugar diacid recognition BF38_252 PF00005 ABC transporter BF38_252 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_2520 PF00486 Transcriptional regulatory protein, C terminal BF38_2520 PF00072 Response regulator receiver domain BF38_2521 PF00512 His Kinase A (phospho-acceptor) domain BF38_2521 PF00989 PAS fold BF38_2521 PF18698 Histidine kinase sensor domain BF38_2521 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2521 PF00672 HAMP domain BF38_2522 PF00392 Bacterial regulatory proteins, gntR family BF38_2522 PF07729 FCD domain BF38_2523 PF02754 Cysteine-rich domain BF38_2524 PF11870 Domain of unknown function (DUF3390) BF38_2524 PF02589 LUD domain BF38_2524 PF13183 4Fe-4S dicluster domain BF38_2525 PF02589 LUD domain BF38_2526 PF01478 Type IV leader peptidase family BF38_2526 PF06750 Bacterial Peptidase A24 N-terminal domain BF38_2528 PF01226 Formate/nitrite transporter BF38_2529 PF03741 Integral membrane protein TerC family BF38_253 PF00005 ABC transporter BF38_253 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF38_2530 PF02386 Cation transport protein BF38_2531 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF38_2532 PF01575 MaoC like domain BF38_2537 PF00561 alpha/beta hydrolase fold BF38_2539 PF02386 Cation transport protein BF38_254 PF06580 Histidine kinase BF38_254 PF07694 5TMR of 5TMR-LYT BF38_254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2543 PF00005 ABC transporter BF38_2543 PF08402 TOBE domain BF38_2544 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2545 PF13419 Haloacid dehalogenase-like hydrolase BF38_2546 PF00266 Aminotransferase class-V BF38_2548 PF00455 DeoR C terminal sensor domain BF38_2548 PF08220 DeoR-like helix-turn-helix domain BF38_255 PF04397 LytTr DNA-binding domain BF38_255 PF00072 Response regulator receiver domain BF38_2550 PF01520 N-acetylmuramoyl-L-alanine amidase BF38_2550 PF00395 S-layer homology domain BF38_2551 PF00596 Class II Aldolase and Adducin N-terminal domain BF38_2553 PF04748 Divergent polysaccharide deacetylase BF38_2554 PF09388 Spo0E like sporulation regulatory protein BF38_2555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2555 PF02743 Cache domain BF38_2555 PF00512 His Kinase A (phospho-acceptor) domain BF38_2556 PF01047 MarR family BF38_2558 PF12867 DinB superfamily BF38_2560 PF00989 PAS fold BF38_2560 PF00512 His Kinase A (phospho-acceptor) domain BF38_2560 PF13188 PAS domain BF38_2560 PF13426 PAS domain BF38_2560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2561 PF06508 Queuosine biosynthesis protein QueC BF38_2562 PF01242 6-pyruvoyl tetrahydropterin synthase BF38_2563 PF04055 Radical SAM superfamily BF38_2564 PF14489 QueF-like protein BF38_2565 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BF38_257 PF04024 PspC domain BF38_2571 PF07972 NrdI Flavodoxin like BF38_2572 PF02867 Ribonucleotide reductase, barrel domain BF38_2572 PF00317 Ribonucleotide reductase, all-alpha domain BF38_2572 PF08343 Ribonucleotide reductase N-terminal BF38_2574 PF00317 Ribonucleotide reductase, all-alpha domain BF38_2574 PF02867 Ribonucleotide reductase, barrel domain BF38_2574 PF08343 Ribonucleotide reductase N-terminal BF38_2575 PF00268 Ribonucleotide reductase, small chain BF38_2576 PF00392 Bacterial regulatory proteins, gntR family BF38_2577 PF00005 ABC transporter BF38_2579 PF00005 ABC transporter BF38_258 PF07883 Cupin domain BF38_258 PF01381 Helix-turn-helix BF38_2581 PF02517 CPBP intramembrane metalloprotease BF38_2583 PF01037 Lrp/AsnC ligand binding domain BF38_2585 PF00857 Isochorismatase family BF38_2587 PF02016 LD-carboxypeptidase N-terminal domain BF38_2587 PF17676 LD-carboxypeptidase C-terminal domain BF38_2588 PF03060 Nitronate monooxygenase BF38_2589 PF04914 DltD protein BF38_259 PF13536 Putative multidrug resistance efflux transporter BF38_2590 PF00550 Phosphopantetheine attachment site BF38_2591 PF03062 MBOAT, membrane-bound O-acyltransferase family BF38_2592 PF13193 AMP-binding enzyme C-terminal domain BF38_2592 PF00501 AMP-binding enzyme BF38_2594 PF01546 Peptidase family M20/M25/M40 BF38_2594 PF07687 Peptidase dimerisation domain BF38_2596 PF00258 Flavodoxin BF38_2599 PF01636 Phosphotransferase enzyme family BF38_26 PF00005 ABC transporter BF38_260 PF00230 Major intrinsic protein BF38_2603 PF01554 MatE BF38_2604 PF02673 Bacitracin resistance protein BacA BF38_2607 PF01047 MarR family BF38_2609 PF00375 Sodium:dicarboxylate symporter family BF38_261 PF02082 Transcriptional regulator BF38_2610 PF02386 Cation transport protein BF38_2612 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF38_2614 PF03698 Uncharacterised protein family (UPF0180) BF38_2616 PF01063 Amino-transferase class IV BF38_2617 PF00205 Thiamine pyrophosphate enzyme, central domain BF38_2617 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF38_2617 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF38_2618 PF01842 ACT domain BF38_2618 PF10369 Small subunit of acetolactate synthase BF38_2619 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF38_2619 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF38_2620 PF08502 LeuA allosteric (dimerisation) domain BF38_2620 PF00682 HMGL-like BF38_2621 PF00180 Isocitrate/isopropylmalate dehydrogenase BF38_2622 PF00330 Aconitase family (aconitate hydratase) BF38_2623 PF00694 Aconitase C-terminal domain BF38_2624 PF13393 Histidyl-tRNA synthetase BF38_2625 PF01634 ATP phosphoribosyltransferase BF38_2626 PF00815 Histidinol dehydrogenase BF38_2627 PF00475 Imidazoleglycerol-phosphate dehydratase BF38_2628 PF00117 Glutamine amidotransferase class-I BF38_2629 PF00977 Histidine biosynthesis protein BF38_263 PF00005 ABC transporter BF38_263 PF13732 Domain of unknown function (DUF4162) BF38_2630 PF00977 Histidine biosynthesis protein BF38_2631 PF01502 Phosphoribosyl-AMP cyclohydrolase BF38_2632 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BF38_2633 PF02811 PHP domain BF38_2635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF38_2635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF38_2636 PF01066 CDP-alcohol phosphatidyltransferase BF38_2637 PF00884 Sulfatase BF38_2639 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BF38_2639 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BF38_264 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BF38_2641 PF01507 Phosphoadenosine phosphosulfate reductase family BF38_2642 PF14306 PUA-like domain BF38_2642 PF01747 ATP-sulfurylase BF38_2644 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF38_2644 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF38_2646 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF38_2647 PF01903 CbiX BF38_2649 PF00209 Sodium:neurotransmitter symporter family BF38_265 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF38_265 PF00691 OmpA family BF38_2651 PF00375 Sodium:dicarboxylate symporter family BF38_2653 PF03553 Na+/H+ antiporter family BF38_2656 PF09922 Cell wall-active antibiotics response 4TMS YvqF BF38_2657 PF00672 HAMP domain BF38_2657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2657 PF07730 Histidine kinase BF38_2658 PF00196 Bacterial regulatory proteins, luxR family BF38_2658 PF00072 Response regulator receiver domain BF38_266 PF01618 MotA/TolQ/ExbB proton channel family BF38_2660 PF05525 Branched-chain amino acid transport protein BF38_2662 PF08241 Methyltransferase domain BF38_2667 PF00042 Globin BF38_2667 PF00175 Oxidoreductase NAD-binding domain BF38_2667 PF00970 Oxidoreductase FAD-binding domain BF38_267 PF02557 D-alanyl-D-alanine carboxypeptidase BF38_2670 PF01925 Sulfite exporter TauE/SafE BF38_2671 PF01384 Phosphate transporter family BF38_2672 PF01865 Protein of unknown function DUF47 BF38_2673 PF00912 Transglycosylase BF38_2673 PF00905 Penicillin binding protein transpeptidase domain BF38_2676 PF00989 PAS fold BF38_2676 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2676 PF00512 His Kinase A (phospho-acceptor) domain BF38_2677 PF01904 Protein of unknown function DUF72 BF38_2679 PF00589 Phage integrase family BF38_268 PF03061 Thioesterase superfamily BF38_2680 PF16736 Single Cache-like BF38_2680 PF00989 PAS fold BF38_2680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2680 PF00512 His Kinase A (phospho-acceptor) domain BF38_2681 PF01048 Phosphorylase superfamily BF38_2684 PF03706 Lysylphosphatidylglycerol synthase TM region BF38_2684 PF09924 Uncharacterised conserved protein (DUF2156) BF38_2687 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF38_2687 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF38_2688 PF07943 Penicillin-binding protein 5, C-terminal domain BF38_2688 PF00768 D-alanyl-D-alanine carboxypeptidase BF38_2689 PF07670 Nucleoside recognition BF38_269 PF13085 2Fe-2S iron-sulfur cluster binding domain BF38_269 PF13183 4Fe-4S dicluster domain BF38_2690 PF07670 Nucleoside recognition BF38_2691 PF00849 RNA pseudouridylate synthase BF38_2691 PF01479 S4 domain BF38_2692 PF00578 AhpC/TSA family BF38_2693 PF05140 ResB-like family BF38_2694 PF01578 Cytochrome C assembly protein BF38_2695 PF00486 Transcriptional regulatory protein, C terminal BF38_2695 PF00072 Response regulator receiver domain BF38_2696 PF00512 His Kinase A (phospho-acceptor) domain BF38_2696 PF00672 HAMP domain BF38_2696 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2696 PF18698 Histidine kinase sensor domain BF38_2696 PF00989 PAS fold BF38_2697 PF01923 Cobalamin adenosyltransferase BF38_2698 PF01551 Peptidase family M23 BF38_27 PF00528 Binding-protein-dependent transport system inner membrane component BF38_270 PF02910 Fumarate reductase flavoprotein C-term BF38_270 PF00890 FAD binding domain BF38_2700 PF12822 ECF transporter, substrate-specific component BF38_2703 PF00270 DEAD/DEAH box helicase BF38_2703 PF00271 Helicase conserved C-terminal domain BF38_2704 PF02517 CPBP intramembrane metalloprotease BF38_2706 PF00149 Calcineurin-like phosphoesterase BF38_2707 PF02310 B12 binding domain BF38_2707 PF02607 B12 binding domain BF38_2707 PF13411 MerR HTH family regulatory protein BF38_2708 PF05389 Negative regulator of genetic competence (MecA) BF38_2709 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF38_2709 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF38_271 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BF38_2714 PF00710 Asparaginase, N-terminal BF38_2714 PF17763 Glutaminase/Asparaginase C-terminal domain BF38_2716 PF02224 Cytidylate kinase BF38_2717 PF00575 S1 RNA binding domain BF38_2718 PF01070 FMN-dependent dehydrogenase BF38_2719 PF14140 YpzI-like protein BF38_272 PF10702 Protein of unknown function (DUF2507) BF38_2721 PF14045 YIEGIA protein BF38_2723 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BF38_2723 PF01926 50S ribosome-binding GTPase BF38_2724 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BF38_2724 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BF38_2726 PF10966 Protein of unknown function (DUF2768) BF38_2728 PF09547 Stage IV sporulation protein A (spore_IV_A) BF38_2729 PF00216 Bacterial DNA-binding protein BF38_273 PF08459 UvrC Helix-hairpin-helix N-terminal BF38_273 PF02151 UvrB/uvrC motif BF38_273 PF01541 GIY-YIG catalytic domain BF38_2730 PF01227 GTP cyclohydrolase I BF38_2731 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BF38_2732 PF01209 ubiE/COQ5 methyltransferase family BF38_2733 PF00348 Polyprenyl synthetase BF38_2734 PF00334 Nucleoside diphosphate kinase BF38_2735 PF01264 Chorismate synthase BF38_2736 PF01761 3-dehydroquinate synthase BF38_2737 PF00155 Aminotransferase class I and II BF38_2739 PF08864 UPF0302 domain BF38_2739 PF08858 IDEAL domain BF38_274 PF00085 Thioredoxin BF38_2740 PF10673 Protein of unknown function (DUF2487) BF38_2741 PF00355 Rieske [2Fe-2S] domain BF38_2742 PF00033 Cytochrome b/b6/petB BF38_2743 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF38_2743 PF00032 Cytochrome b(C-terminal)/b6/petD BF38_2744 PF07187 Protein of unknown function (DUF1405) BF38_2746 PF09577 Sporulation protein YpjB (SpoYpjB) BF38_2747 PF04298 Putative neutral zinc metallopeptidase BF38_2749 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_2749 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_275 PF00766 Electron transfer flavoprotein FAD-binding domain BF38_275 PF01012 Electron transfer flavoprotein domain BF38_2750 PF03819 MazG nucleotide pyrophosphohydrolase domain BF38_2751 PF05173 Dihydrodipicolinate reductase, C-terminus BF38_2751 PF01113 Dihydrodipicolinate reductase, N-terminus BF38_2752 PF02142 MGS-like domain BF38_2753 PF02585 GlcNAc-PI de-N-acetylase BF38_2754 PF00534 Glycosyl transferases group 1 BF38_2754 PF13439 Glycosyltransferase Family 4 BF38_2755 PF12627 Probable RNA and SrmB- binding site of polymerase A BF38_2755 PF13735 tRNA nucleotidyltransferase domain 2 putative BF38_2755 PF01743 Poly A polymerase head domain BF38_2756 PF03099 Biotin/lipoate A/B protein ligase family BF38_2756 PF02237 Biotin protein ligase C terminal domain BF38_2756 PF08279 HTH domain BF38_2758 PF02548 Ketopantoate hydroxymethyltransferase BF38_2759 PF02569 Pantoate-beta-alanine ligase BF38_276 PF01012 Electron transfer flavoprotein domain BF38_2760 PF02261 Aspartate decarboxylase BF38_2761 PF13307 Helicase C-terminal domain BF38_2761 PF04851 Type III restriction enzyme, res subunit BF38_2761 PF00929 Exonuclease BF38_2762 PF14084 Protein of unknown function (DUF4264) BF38_2764 PF00155 Aminotransferase class I and II BF38_2765 PF07261 Replication initiation and membrane attachment BF38_2766 PF00633 Helix-hairpin-helix motif BF38_2766 PF00730 HhH-GPD superfamily base excision DNA repair protein BF38_2766 PF10576 Iron-sulfur binding domain of endonuclease III BF38_2768 PF00905 Penicillin binding protein transpeptidase domain BF38_2768 PF00912 Transglycosylase BF38_2769 PF03838 Recombination protein U BF38_277 PF00378 Enoyl-CoA hydratase/isomerase BF38_2770 PF10720 Protein of unknown function (DUF2515) BF38_2777 PF06908 YspA SLOG family BF38_2778 PF05103 DivIVA protein BF38_2779 PF01170 Putative RNA methylase family UPF0020 BF38_2779 PF02926 THUMP domain BF38_278 PF00440 Bacterial regulatory proteins, tetR family BF38_278 PF08359 YsiA-like protein, C-terminal region BF38_2781 PF13307 Helicase C-terminal domain BF38_2782 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BF38_2784 PF01636 Phosphotransferase enzyme family BF38_2785 PF00557 Metallopeptidase family M24 BF38_2786 PF00156 Phosphoribosyl transferase domain BF38_2787 PF00860 Permease family BF38_2788 PF04235 Protein of unknown function (DUF418) BF38_279 PF00501 AMP-binding enzyme BF38_279 PF13193 AMP-binding enzyme C-terminal domain BF38_2790 PF00350 Dynamin family BF38_2792 PF00583 Acetyltransferase (GNAT) family BF38_2793 PF10752 Protein of unknown function (DUF2533) BF38_2794 PF00581 Rhodanese-like domain BF38_2797 PF03738 Glutathionylspermidine synthase preATP-grasp BF38_2799 PF00690 Cation transporter/ATPase, N-terminus BF38_2799 PF00689 Cation transporting ATPase, C-terminus BF38_28 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2800 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF38_2800 PF01367 5'-3' exonuclease, C-terminal SAM fold BF38_2805 PF02397 Bacterial sugar transferase BF38_2808 PF00535 Glycosyl transferase family 2 BF38_2809 PF00534 Glycosyl transferases group 1 BF38_2809 PF13439 Glycosyltransferase Family 4 BF38_281 PF01497 Periplasmic binding protein BF38_2813 PF18014 Acetyltransferase (GNAT) domain BF38_2813 PF13673 Acetyltransferase (GNAT) domain BF38_2817 PF13456 Reverse transcriptase-like BF38_2818 PF01263 Aldose 1-epimerase BF38_282 PF01032 FecCD transport family BF38_2823 PF00313 'Cold-shock' DNA-binding domain BF38_2824 PF08892 YqcI/YcgG family BF38_2825 PF01810 LysE type translocator BF38_2828 PF04341 Protein of unknown function, DUF485 BF38_2829 PF00474 Sodium:solute symporter family BF38_283 PF05163 DinB family BF38_2830 PF00202 Aminotransferase class-III BF38_2832 PF00999 Sodium/hydrogen exchanger family BF38_2833 PF17770 Ribonuclease J C-terminal domain BF38_2833 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF38_2833 PF00753 Metallo-beta-lactamase superfamily BF38_2834 PF13411 MerR HTH family regulatory protein BF38_2834 PF06445 GyrI-like small molecule binding domain BF38_2836 PF04239 Protein of unknown function (DUF421) BF38_2837 PF02698 DUF218 domain BF38_2839 PF00881 Nitroreductase family BF38_2848 PF17209 Hfq protein BF38_2850 PF01618 MotA/TolQ/ExbB proton channel family BF38_2851 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF38_2851 PF00691 OmpA family BF38_2852 PF00072 Response regulator receiver domain BF38_2853 PF01584 CheW-like domain BF38_2853 PF02895 Signal transducing histidine kinase, homodimeric domain BF38_2853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2853 PF01627 Hpt domain BF38_2853 PF07194 P2 response regulator binding domain BF38_2854 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF38_2854 PF04509 CheC-like family BF38_2857 PF01739 CheR methyltransferase, SAM binding domain BF38_2857 PF03705 CheR methyltransferase, all-alpha domain BF38_2861 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF38_2861 PF00460 Flagella basal body rod protein BF38_2862 PF00669 Bacterial flagellin N-terminal helical region BF38_2862 PF00700 Bacterial flagellin C-terminal helical region BF38_2863 PF07195 Flagellar hook-associated protein 2 C-terminus BF38_2863 PF07196 Flagellin hook IN motif BF38_2863 PF02465 Flagellar hook-associated protein 2 N-terminus BF38_2866 PF00460 Flagella basal body rod protein BF38_2867 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF38_2867 PF00460 Flagella basal body rod protein BF38_2868 PF02049 Flagellar hook-basal body complex protein FliE BF38_2869 PF01514 Secretory protein of YscJ/FliF family BF38_2869 PF08345 Flagellar M-ring protein C-terminal BF38_2870 PF01706 FliG C-terminal domain BF38_2870 PF14841 FliG middle domain BF38_2870 PF14842 FliG N-terminal domain BF38_2872 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF38_2872 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF38_2872 PF18269 T3SS EscN ATPase C-terminal domain BF38_2876 PF07559 Flagellar basal body protein FlaE BF38_2876 PF00460 Flagella basal body rod protein BF38_2876 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF38_2879 PF01584 CheW-like domain BF38_2879 PF00072 Response regulator receiver domain BF38_288 PF00005 ABC transporter BF38_2880 PF12181 DNA binding domain of the motility gene repressor (MogR) BF38_2881 PF00700 Bacterial flagellin C-terminal helical region BF38_2881 PF00669 Bacterial flagellin N-terminal helical region BF38_2882 PF00700 Bacterial flagellin C-terminal helical region BF38_2882 PF00669 Bacterial flagellin N-terminal helical region BF38_2883 PF01464 Transglycosylase SLT domain BF38_2885 PF02154 Flagellar motor switch protein FliM BF38_2885 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF38_2886 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF38_2886 PF04509 CheC-like family BF38_2888 PF00813 FliP family BF38_2889 PF01313 Bacterial export proteins, family 3 BF38_289 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_289 PF00512 His Kinase A (phospho-acceptor) domain BF38_2891 PF01312 FlhB HrpN YscU SpaS Family BF38_2892 PF00771 FHIPEP family BF38_2893 PF00448 SRP54-type protein, GTPase domain BF38_2894 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF38_2894 PF00460 Flagella basal body rod protein BF38_2895 PF01411 tRNA synthetases class II (A) BF38_2895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF38_2895 PF02272 DHHA1 domain BF38_29 PF12849 PBP superfamily domain BF38_290 PF00486 Transcriptional regulatory protein, C terminal BF38_290 PF00072 Response regulator receiver domain BF38_2902 PF03992 Antibiotic biosynthesis monooxygenase BF38_2903 PF08141 Small acid-soluble spore protein H family BF38_2908 PF08402 TOBE domain BF38_2908 PF00005 ABC transporter BF38_2910 PF00528 Binding-protein-dependent transport system inner membrane component BF38_2911 PF00753 Metallo-beta-lactamase superfamily BF38_2911 PF12706 Beta-lactamase superfamily domain BF38_2913 PF10787 Uncharacterised protein from bacillus cereus group BF38_2916 PF07943 Penicillin-binding protein 5, C-terminal domain BF38_2916 PF00768 D-alanyl-D-alanine carboxypeptidase BF38_292 PF09962 Uncharacterized conserved protein (DUF2196) BF38_2922 PF01047 MarR family BF38_2924 PF00733 Asparagine synthase BF38_2924 PF13537 Glutamine amidotransferase domain BF38_2928 PF01545 Cation efflux family BF38_2928 PF16916 Dimerisation domain of Zinc Transporter BF38_293 PF17785 PUA-like domain BF38_293 PF10672 S-adenosylmethionine-dependent methyltransferase BF38_2930 PF07729 FCD domain BF38_2930 PF00392 Bacterial regulatory proteins, gntR family BF38_2931 PF00892 EamA-like transporter family BF38_2932 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF38_2932 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF38_2933 PF03773 Predicted permease BF38_2935 PF00535 Glycosyl transferase family 2 BF38_2936 PF03553 Na+/H+ antiporter family BF38_2937 PF13411 MerR HTH family regulatory protein BF38_2939 PF00206 Lyase BF38_2939 PF10415 Fumarase C C-terminus BF38_2943 PF01554 MatE BF38_2944 PF03575 Peptidase family S51 BF38_2948 PF02683 Cytochrome C biogenesis protein transmembrane region BF38_2949 PF00578 AhpC/TSA family BF38_295 PF03992 Antibiotic biosynthesis monooxygenase BF38_2953 PF00291 Pyridoxal-phosphate dependent enzyme BF38_2954 PF04286 Protein of unknown function (DUF445) BF38_2959 PF00196 Bacterial regulatory proteins, luxR family BF38_2959 PF00072 Response regulator receiver domain BF38_296 PF04203 Sortase domain BF38_2960 PF13185 GAF domain BF38_2960 PF13492 GAF domain BF38_2960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_2960 PF07730 Histidine kinase BF38_2961 PF00005 ABC transporter BF38_2964 PF13091 PLD-like domain BF38_2965 PF00696 Amino acid kinase family BF38_2966 PF00375 Sodium:dicarboxylate symporter family BF38_2967 PF10415 Fumarase C C-terminus BF38_2967 PF00206 Lyase BF38_2968 PF03949 Malic enzyme, NAD binding domain BF38_2968 PF00390 Malic enzyme, N-terminal domain BF38_2969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_297 PF00005 ABC transporter BF38_2970 PF00072 Response regulator receiver domain BF38_2970 PF08664 YcbB domain BF38_2971 PF00271 Helicase conserved C-terminal domain BF38_2971 PF00176 SNF2 family N-terminal domain BF38_2971 PF04434 SWIM zinc finger BF38_2973 PF03590 Aspartate-ammonia ligase BF38_2977 PF00696 Amino acid kinase family BF38_2977 PF13840 ACT domain BF38_2979 PF13761 Domain of unknown function (DUF4166) BF38_298 PF01032 FecCD transport family BF38_2980 PF14158 YndJ-like protein BF38_2981 PF00293 NUDIX domain BF38_2982 PF13205 Bacterial Ig-like domain BF38_2982 PF00395 S-layer homology domain BF38_2982 PF02368 Bacterial Ig-like domain (group 2) BF38_2984 PF07690 Major Facilitator Superfamily BF38_2987 PF02554 Carbon starvation protein CstA BF38_2988 PF03976 Polyphosphate kinase 2 (PPK2) BF38_2989 PF07690 Major Facilitator Superfamily BF38_299 PF01497 Periplasmic binding protein BF38_2990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF38_2990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF38_2992 PF16360 GTP-binding GTPase Middle Region BF38_2992 PF01926 50S ribosome-binding GTPase BF38_2992 PF13167 GTP-binding GTPase N-terminal BF38_2993 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_2994 PF07690 Major Facilitator Superfamily BF38_2995 PF00291 Pyridoxal-phosphate dependent enzyme BF38_2998 PF14667 Polysaccharide biosynthesis C-terminal domain BF38_2998 PF01943 Polysaccharide biosynthesis protein BF38_2999 PF00209 Sodium:neurotransmitter symporter family BF38_3 PF11117 Protein of unknown function (DUF2626) BF38_300 PF05031 Iron Transport-associated domain BF38_3000 PF01522 Polysaccharide deacetylase BF38_3000 PF00457 Glycosyl hydrolases family 11 BF38_3000 PF03422 Carbohydrate binding module (family 6) BF38_3002 PF04239 Protein of unknown function (DUF421) BF38_3006 PF01625 Peptide methionine sulfoxide reductase BF38_3008 PF01063 Amino-transferase class IV BF38_3009 PF00205 Thiamine pyrophosphate enzyme, central domain BF38_3009 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF38_3009 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF38_3010 PF10369 Small subunit of acetolactate synthase BF38_3011 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF38_3011 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF38_3012 PF00920 Dehydratase family BF38_3013 PF00585 C-terminal regulatory domain of Threonine dehydratase BF38_3013 PF00291 Pyridoxal-phosphate dependent enzyme BF38_3015 PF09587 Bacterial capsule synthesis protein PGA_cap BF38_3018 PF07690 Major Facilitator Superfamily BF38_3019 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BF38_302 PF05031 Iron Transport-associated domain BF38_3021 PF04397 LytTr DNA-binding domain BF38_3021 PF00072 Response regulator receiver domain BF38_3022 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BF38_3022 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BF38_3025 PF01979 Amidohydrolase family BF38_3026 PF12146 Serine aminopeptidase, S33 BF38_3026 PF13026 Protein of unknown function (DUF3887) BF38_3027 PF00589 Phage integrase family BF38_3027 PF14659 Phage integrase, N-terminal SAM-like domain BF38_303 PF05525 Branched-chain amino acid transport protein BF38_3030 PF01381 Helix-turn-helix BF38_3033 PF01381 Helix-turn-helix BF38_304 PF01479 S4 domain BF38_304 PF00849 RNA pseudouridylate synthase BF38_3040 PF01695 IstB-like ATP binding protein BF38_3040 PF07319 Primosomal protein DnaI N-terminus BF38_3051 PF07883 Cupin domain BF38_3058 PF00589 Phage integrase family BF38_3059 PF04239 Protein of unknown function (DUF421) BF38_306 PF00488 MutS domain V BF38_306 PF01713 Smr domain BF38_3061 PF01580 FtsK/SpoIIIE family BF38_3061 PF17854 FtsK alpha domain BF38_3061 PF09397 Ftsk gamma domain BF38_307 PF02811 PHP domain BF38_307 PF14791 DNA polymerase beta thumb BF38_307 PF14716 Helix-hairpin-helix domain BF38_3070 PF03354 Phage Terminase BF38_3073 PF00574 Clp protease BF38_308 PF02674 Colicin V production protein BF38_3085 PF05105 Bacteriophage holin family BF38_309 PF05164 Cell division protein ZapA BF38_3093 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_3097 PF13186 Iron-sulfur cluster-binding domain BF38_3097 PF04055 Radical SAM superfamily BF38_3098 PF13302 Acetyltransferase (GNAT) domain BF38_3099 PF00072 Response regulator receiver domain BF38_3099 PF00486 Transcriptional regulatory protein, C terminal BF38_31 PF07690 Major Facilitator Superfamily BF38_310 PF11858 Domain of unknown function (DUF3378) BF38_310 PF01351 Ribonuclease HII BF38_3100 PF00512 His Kinase A (phospho-acceptor) domain BF38_3100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_3102 PF01566 Natural resistance-associated macrophage protein BF38_3105 PF02558 Ketopantoate reductase PanE/ApbA BF38_3105 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF38_3107 PF13520 Amino acid permease BF38_3109 PF05791 Bacillus haemolytic enterotoxin (HBL) BF38_3110 PF05791 Bacillus haemolytic enterotoxin (HBL) BF38_3112 PF04198 Putative sugar-binding domain BF38_3113 PF01791 DeoC/LacD family aldolase BF38_3114 PF07662 Na+ dependent nucleoside transporter C-terminus BF38_3114 PF01773 Na+ dependent nucleoside transporter N-terminus BF38_3115 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF38_3115 PF02885 Glycosyl transferase family, helical bundle domain BF38_3115 PF00591 Glycosyl transferase family, a/b domain BF38_3116 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF38_3117 PF05979 Bacterial protein of unknown function (DUF896) BF38_3121 PF05195 Aminopeptidase P, N-terminal domain BF38_3121 PF00557 Metallopeptidase family M24 BF38_3122 PF07732 Multicopper oxidase BF38_3122 PF07731 Multicopper oxidase BF38_3122 PF00394 Multicopper oxidase BF38_3123 PF01551 Peptidase family M23 BF38_3127 PF07690 Major Facilitator Superfamily BF38_3129 PF02525 Flavodoxin-like fold BF38_3130 PF05525 Branched-chain amino acid transport protein BF38_3132 PF04234 CopC domain BF38_3132 PF05425 Copper resistance protein D BF38_3132 PF13115 YtkA-like BF38_3133 PF07987 Domain of unkown function (DUF1775) BF38_3134 PF00892 EamA-like transporter family BF38_3135 PF03466 LysR substrate binding domain BF38_3135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_3136 PF02082 Transcriptional regulator BF38_3137 PF01323 DSBA-like thioredoxin domain BF38_3138 PF00881 Nitroreductase family BF38_314 PF00152 tRNA synthetases class II (D, K and N) BF38_314 PF01336 OB-fold nucleic acid binding domain BF38_3140 PF01425 Amidase BF38_3141 PF01594 AI-2E family transporter BF38_3142 PF00056 lactate/malate dehydrogenase, NAD binding domain BF38_3142 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF38_3143 PF01593 Flavin containing amine oxidoreductase BF38_3144 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF38_3144 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF38_3147 PF00501 AMP-binding enzyme BF38_3147 PF13193 AMP-binding enzyme C-terminal domain BF38_3148 PF01575 MaoC like domain BF38_3149 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF38_3149 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF38_315 PF03147 Ferredoxin-fold anticodon binding domain BF38_315 PF01588 Putative tRNA binding domain BF38_315 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BF38_315 PF03483 B3/4 domain BF38_315 PF03484 tRNA synthetase B5 domain BF38_3151 PF12399 Branched-chain amino acid ATP-binding cassette transporter BF38_3151 PF00005 ABC transporter BF38_3152 PF00005 ABC transporter BF38_3153 PF02653 Branched-chain amino acid transport system / permease component BF38_3155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_3155 PF03466 LysR substrate binding domain BF38_3157 PF14552 Tautomerase enzyme BF38_3159 PF01047 MarR family BF38_316 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BF38_316 PF01409 tRNA synthetases class II core domain (F) BF38_3161 PF01654 Cytochrome bd terminal oxidase subunit I BF38_3162 PF02322 Cytochrome bd terminal oxidase subunit II BF38_3163 PF00664 ABC transporter transmembrane region BF38_3163 PF00005 ABC transporter BF38_3164 PF00005 ABC transporter BF38_3164 PF00664 ABC transporter transmembrane region BF38_3167 PF17676 LD-carboxypeptidase C-terminal domain BF38_3167 PF02016 LD-carboxypeptidase N-terminal domain BF38_3168 PF07943 Penicillin-binding protein 5, C-terminal domain BF38_3168 PF00768 D-alanyl-D-alanine carboxypeptidase BF38_317 PF00588 SpoU rRNA Methylase family BF38_317 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF38_3170 PF01476 LysM domain BF38_3170 PF00877 NlpC/P60 family BF38_3172 PF00005 ABC transporter BF38_3172 PF00664 ABC transporter transmembrane region BF38_3173 PF00486 Transcriptional regulatory protein, C terminal BF38_3173 PF00072 Response regulator receiver domain BF38_3174 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_3174 PF16736 Single Cache-like BF38_3174 PF00989 PAS fold BF38_3174 PF00512 His Kinase A (phospho-acceptor) domain BF38_3176 PF00106 short chain dehydrogenase BF38_3177 PF04439 Streptomycin adenylyltransferase BF38_3178 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BF38_3178 PF01522 Polysaccharide deacetylase BF38_3179 PF13630 SdpI/YhfL protein family BF38_318 PF14098 Small, acid-soluble spore protein I BF38_3182 PF03447 Homoserine dehydrogenase, NAD binding domain BF38_3182 PF00742 Homoserine dehydrogenase BF38_3182 PF01842 ACT domain BF38_3183 PF00291 Pyridoxal-phosphate dependent enzyme BF38_3184 PF08544 GHMP kinases C terminal BF38_3184 PF00288 GHMP kinases N terminal domain BF38_3187 PF03816 Cell envelope-related transcriptional attenuator domain BF38_3189 PF00072 Response regulator receiver domain BF38_3189 PF00486 Transcriptional regulatory protein, C terminal BF38_319 PF01966 HD domain BF38_3190 PF00989 PAS fold BF38_3190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_3190 PF00512 His Kinase A (phospho-acceptor) domain BF38_3190 PF16736 Single Cache-like BF38_3191 PF01522 Polysaccharide deacetylase BF38_3193 PF02308 MgtC family BF38_3194 PF00583 Acetyltransferase (GNAT) family BF38_3195 PF06276 Ferric iron reductase FhuF-like transporter BF38_3195 PF04183 IucA / IucC family BF38_3196 PF04183 IucA / IucC family BF38_3196 PF06276 Ferric iron reductase FhuF-like transporter BF38_3197 PF00501 AMP-binding enzyme BF38_3197 PF13193 AMP-binding enzyme C-terminal domain BF38_32 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF38_32 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF38_3200 PF01261 Xylose isomerase-like TIM barrel BF38_3201 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF38_3202 PF07690 Major Facilitator Superfamily BF38_3203 PF01810 LysE type translocator BF38_3205 PF01734 Patatin-like phospholipase BF38_3210 PF00293 NUDIX domain BF38_3210 PF13344 Haloacid dehalogenase-like hydrolase BF38_3211 PF02540 NAD synthase BF38_3212 PF02687 FtsX-like permease family BF38_3213 PF18277 AbrB C-terminal domain BF38_3213 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF38_3215 PF13276 HTH-like domain BF38_3215 PF00665 Integrase core domain BF38_3215 PF13333 Integrase core domain BF38_3216 PF00082 Subtilase family BF38_3217 PF01022 Bacterial regulatory protein, arsR family BF38_3218 PF00248 Aldo/keto reductase family BF38_3219 PF07690 Major Facilitator Superfamily BF38_3223 PF03193 RsgA GTPase BF38_3224 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_3224 PF02743 Cache domain BF38_3224 PF00672 HAMP domain BF38_3228 PF00210 Ferritin-like domain BF38_3231 PF00296 Luciferase-like monooxygenase BF38_3233 PF01593 Flavin containing amine oxidoreductase BF38_3235 PF00248 Aldo/keto reductase family BF38_3236 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF38_3236 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF38_3237 PF00583 Acetyltransferase (GNAT) family BF38_324 PF07690 Major Facilitator Superfamily BF38_3247 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BF38_3247 PF01297 Zinc-uptake complex component A periplasmic BF38_3249 PF13460 NAD(P)H-binding BF38_3250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF38_3251 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF38_3251 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF38_3253 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_3254 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_3256 PF00300 Histidine phosphatase superfamily (branch 1) BF38_3258 PF08757 CotH kinase protein BF38_3259 PF00293 NUDIX domain BF38_326 PF16859 Tetracyclin repressor-like, C-terminal domain BF38_326 PF00440 Bacterial regulatory proteins, tetR family BF38_3260 PF09335 SNARE associated Golgi protein BF38_3261 PF14667 Polysaccharide biosynthesis C-terminal domain BF38_3261 PF01943 Polysaccharide biosynthesis protein BF38_3263 PF03773 Predicted permease BF38_3264 PF09323 Domain of unknown function (DUF1980) BF38_3265 PF03061 Thioesterase superfamily BF38_3266 PF13396 Phospholipase_D-nuclease N-terminal BF38_3266 PF13091 PLD-like domain BF38_3269 PF13460 NAD(P)H-binding BF38_327 PF05343 M42 glutamyl aminopeptidase BF38_3270 PF04306 Protein of unknown function (DUF456) BF38_3271 PF03471 Transporter associated domain BF38_3271 PF01595 Cyclin M transmembrane N-terminal domain BF38_3271 PF00571 CBS domain BF38_3274 PF05525 Branched-chain amino acid transport protein BF38_3275 PF01588 Putative tRNA binding domain BF38_3279 PF07454 Stage II sporulation protein P (SpoIIP) BF38_3281 PF02557 D-alanyl-D-alanine carboxypeptidase BF38_3283 PF01425 Amidase BF38_3284 PF07690 Major Facilitator Superfamily BF38_3286 PF01145 SPFH domain / Band 7 family BF38_3287 PF00300 Histidine phosphatase superfamily (branch 1) BF38_329 PF00453 Ribosomal protein L20 BF38_3290 PF01168 Alanine racemase, N-terminal domain BF38_3290 PF00842 Alanine racemase, C-terminal domain BF38_3294 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF38_3295 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_3295 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_3296 PF00392 Bacterial regulatory proteins, gntR family BF38_3296 PF00155 Aminotransferase class I and II BF38_330 PF01632 Ribosomal protein L35 BF38_3302 PF00583 Acetyltransferase (GNAT) family BF38_331 PF05198 Translation initiation factor IF-3, N-terminal domain BF38_331 PF00707 Translation initiation factor IF-3, C-terminal domain BF38_3315 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF38_332 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF38_332 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF38_332 PF02824 TGS domain BF38_332 PF03129 Anticodon binding domain BF38_3320 PF01209 ubiE/COQ5 methyltransferase family BF38_3321 PF01268 Formate--tetrahydrofolate ligase BF38_3323 PF00271 Helicase conserved C-terminal domain BF38_3323 PF00270 DEAD/DEAH box helicase BF38_3324 PF01261 Xylose isomerase-like TIM barrel BF38_3325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_3327 PF08240 Alcohol dehydrogenase GroES-like domain BF38_3327 PF00107 Zinc-binding dehydrogenase BF38_3328 PF08281 Sigma-70, region 4 BF38_3328 PF04542 Sigma-70 region 2 BF38_333 PF08812 YtxC-like family BF38_3330 PF03109 ABC1 family BF38_3334 PF00255 Glutathione peroxidase BF38_3335 PF11992 Domain of unknown function (DUF3488) BF38_3335 PF01841 Transglutaminase-like superfamily BF38_3335 PF13559 Domain of unknown function (DUF4129) BF38_3336 PF01882 Protein of unknown function DUF58 BF38_3337 PF07726 ATPase family associated with various cellular activities (AAA) BF38_3337 PF17863 AAA lid domain BF38_3338 PF01568 Molydopterin dinucleotide binding domain BF38_3338 PF14710 Respiratory nitrate reductase alpha N-terminal BF38_3338 PF00384 Molybdopterin oxidoreductase BF38_3339 PF14711 Respiratory nitrate reductase beta C-terminal BF38_3339 PF13247 4Fe-4S dicluster domain BF38_334 PF07319 Primosomal protein DnaI N-terminus BF38_334 PF01695 IstB-like ATP binding protein BF38_3340 PF02613 Nitrate reductase delta subunit BF38_3341 PF02665 Nitrate reductase gamma subunit BF38_3343 PF02082 Transcriptional regulator BF38_3344 PF00085 Thioredoxin BF38_3345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF38_3345 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_3346 PF01521 Iron-sulphur cluster biosynthesis BF38_3347 PF02566 OsmC-like protein BF38_3348 PF00857 Isochorismatase family BF38_335 PF07261 Replication initiation and membrane attachment BF38_3351 PF00325 Bacterial regulatory proteins, crp family BF38_3351 PF00027 Cyclic nucleotide-binding domain BF38_3352 PF06463 Molybdenum Cofactor Synthesis C BF38_3352 PF04055 Radical SAM superfamily BF38_3353 PF00899 ThiF family BF38_3354 PF03453 MoeA N-terminal region (domain I and II) BF38_3354 PF03454 MoeA C-terminal region (domain IV) BF38_3354 PF00994 Probable molybdopterin binding domain BF38_3355 PF02391 MoaE protein BF38_3357 PF07690 Major Facilitator Superfamily BF38_336 PF03477 ATP cone domain BF38_3360 PF01903 CbiX BF38_3361 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF38_3362 PF00355 Rieske [2Fe-2S] domain BF38_3363 PF18267 Rubredoxin NAD+ reductase C-terminal domain BF38_3363 PF04324 BFD-like [2Fe-2S] binding domain BF38_3363 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_3363 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF38_3363 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF38_3364 PF04405 Domain of Unknown function (DUF542) BF38_3364 PF01814 Hemerythrin HHE cation binding domain BF38_337 PF02675 S-adenosylmethionine decarboxylase BF38_3371 PF04232 Stage V sporulation protein S (SpoVS) BF38_3375 PF01966 HD domain BF38_3376 PF12848 ABC transporter BF38_3376 PF16326 ABC transporter C-terminal domain BF38_3376 PF00005 ABC transporter BF38_3379 PF00436 Single-strand binding protein family BF38_338 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF38_338 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF38_3380 PF08712 Scaffold protein Nfu/NifU N terminal BF38_3380 PF13769 Virulence factor BF38_3382 PF06491 Disulphide isomerase BF38_3383 PF04445 Putative SAM-dependent methyltransferase BF38_3384 PF03485 Arginyl tRNA synthetase N terminal domain BF38_3384 PF05746 DALR anticodon binding domain BF38_3384 PF00750 tRNA synthetases class I (R) BF38_3389 PF00133 tRNA synthetases class I (I, L, M and V) BF38_3389 PF08264 Anticodon-binding domain of tRNA BF38_339 PF01121 Dephospho-CoA kinase BF38_3392 PF08245 Mur ligase middle domain BF38_3392 PF01225 Mur ligase family, catalytic domain BF38_3392 PF02875 Mur ligase family, glutamate ligase domain BF38_3393 PF00152 tRNA synthetases class II (D, K and N) BF38_3393 PF01336 OB-fold nucleic acid binding domain BF38_3397 PF01580 FtsK/SpoIIIE family BF38_3397 PF12538 DNA transporter BF38_340 PF02659 Putative manganese efflux pump BF38_341 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BF38_341 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BF38_341 PF06827 Zinc finger found in FPG and IleRS BF38_3415 PF02595 Glycerate kinase family BF38_3416 PF00939 Sodium:sulfate symporter transmembrane region BF38_3417 PF00072 Response regulator receiver domain BF38_3417 PF00486 Transcriptional regulatory protein, C terminal BF38_3418 PF00512 His Kinase A (phospho-acceptor) domain BF38_3418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_3418 PF00672 HAMP domain BF38_342 PF01367 5'-3' exonuclease, C-terminal SAM fold BF38_342 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF38_342 PF00476 DNA polymerase family A BF38_3421 PF00209 Sodium:neurotransmitter symporter family BF38_3424 PF10997 Alternate to MurJ BF38_3425 PF13419 Haloacid dehalogenase-like hydrolase BF38_3427 PF00465 Iron-containing alcohol dehydrogenase BF38_3428 PF01177 Asp/Glu/Hydantoin racemase BF38_3429 PF01980 tRNA-methyltransferase O BF38_343 PF16736 Single Cache-like BF38_343 PF00989 PAS fold BF38_343 PF00512 His Kinase A (phospho-acceptor) domain BF38_343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_3430 PF00583 Acetyltransferase (GNAT) family BF38_3433 PF00005 ABC transporter BF38_3434 PF05975 Bacterial ABC transporter protein EcsB BF38_3435 PF14005 YpjP-like protein BF38_3436 PF13419 Haloacid dehalogenase-like hydrolase BF38_3439 PF00144 Beta-lactamase BF38_3439 PF07930 D-aminopeptidase, domain B BF38_344 PF00486 Transcriptional regulatory protein, C terminal BF38_344 PF00072 Response regulator receiver domain BF38_3440 PF00303 Thymidylate synthase BF38_3441 PF00186 Dihydrofolate reductase BF38_3442 PF03717 Penicillin-binding Protein dimerisation domain BF38_3442 PF05223 NTF2-like N-terminal transpeptidase domain BF38_3442 PF00905 Penicillin binding protein transpeptidase domain BF38_3443 PF02525 Flavodoxin-like fold BF38_3444 PF01553 Acyltransferase BF38_3445 PF03006 Haemolysin-III related BF38_3446 PF02416 mttA/Hcf106 family BF38_3447 PF00902 Sec-independent protein translocase protein (TatC) BF38_3449 PF02645 Uncharacterised protein, DegV family COG1307 BF38_3451 PF02630 SCO1/SenC BF38_3452 PF00011 Hsp20/alpha crystallin family BF38_3453 PF13537 Glutamine amidotransferase domain BF38_3453 PF00733 Asparagine synthase BF38_3457 PF01497 Periplasmic binding protein BF38_3458 PF01063 Amino-transferase class IV BF38_3459 PF00881 Nitroreductase family BF38_3462 PF00857 Isochorismatase family BF38_3463 PF00293 NUDIX domain BF38_3464 PF00011 Hsp20/alpha crystallin family BF38_3465 PF00924 Mechanosensitive ion channel BF38_3466 PF07730 Histidine kinase BF38_3466 PF13185 GAF domain BF38_3467 PF00196 Bacterial regulatory proteins, luxR family BF38_3467 PF00072 Response regulator receiver domain BF38_3469 PF01418 Helix-turn-helix domain, rpiR family BF38_3469 PF01380 SIS domain BF38_3470 PF00107 Zinc-binding dehydrogenase BF38_3470 PF08240 Alcohol dehydrogenase GroES-like domain BF38_3473 PF00144 Beta-lactamase BF38_3475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF38_3475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF38_3476 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF38_3476 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF38_3479 PF03358 NADPH-dependent FMN reductase BF38_348 PF00056 lactate/malate dehydrogenase, NAD binding domain BF38_348 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF38_3482 PF00005 ABC transporter BF38_3482 PF00571 CBS domain BF38_3483 PF00528 Binding-protein-dependent transport system inner membrane component BF38_3484 PF13520 Amino acid permease BF38_349 PF00180 Isocitrate/isopropylmalate dehydrogenase BF38_3490 PF03471 Transporter associated domain BF38_3490 PF01595 Cyclin M transmembrane N-terminal domain BF38_3490 PF00571 CBS domain BF38_3491 PF00171 Aldehyde dehydrogenase family BF38_3492 PF07997 Protein of unknown function (DUF1694) BF38_3493 PF09385 Histidine kinase N terminal BF38_3495 PF00202 Aminotransferase class-III BF38_3496 PF01144 Coenzyme A transferase BF38_3497 PF01144 Coenzyme A transferase BF38_3498 PF01546 Peptidase family M20/M25/M40 BF38_3498 PF07687 Peptidase dimerisation domain BF38_3499 PF00583 Acetyltransferase (GNAT) family BF38_350 PF00285 Citrate synthase, C-terminal domain BF38_3500 PF13426 PAS domain BF38_3500 PF00158 Sigma-54 interaction domain BF38_3500 PF02954 Bacterial regulatory protein, Fis family BF38_3501 PF12544 Lysine-2,3-aminomutase BF38_3502 PF14122 YokU-like protein, putative antitoxin BF38_3503 PF06855 YozE SAM-like fold BF38_3506 PF14162 YozD-like protein BF38_3509 PF07070 SpoOM protein BF38_351 PF04284 Protein of unknown function (DUF441) BF38_3510 PF01545 Cation efflux family BF38_3510 PF16916 Dimerisation domain of Zinc Transporter BF38_3511 PF01569 PAP2 superfamily BF38_3512 PF00085 Thioredoxin BF38_3514 PF14436 Bacterial EndoU nuclease BF38_3514 PF04740 LXG domain of WXG superfamily BF38_352 PF01594 AI-2E family transporter BF38_353 PF04186 FxsA cytoplasmic membrane protein BF38_3531 PF10676 Spore germination protein gerPA/gerPF BF38_3535 PF00912 Transglycosylase BF38_3535 PF00905 Penicillin binding protein transpeptidase domain BF38_3536 PF07690 Major Facilitator Superfamily BF38_3537 PF01521 Iron-sulphur cluster biosynthesis BF38_3538 PF00285 Citrate synthase, C-terminal domain BF38_3539 PF03972 MmgE/PrpD family BF38_354 PF00224 Pyruvate kinase, barrel domain BF38_354 PF02887 Pyruvate kinase, alpha/beta domain BF38_354 PF00391 PEP-utilising enzyme, mobile domain BF38_3541 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF38_3541 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF38_3541 PF02770 Acyl-CoA dehydrogenase, middle domain BF38_3542 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF38_3542 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF38_3543 PF00171 Aldehyde dehydrogenase family BF38_3544 PF01810 LysE type translocator BF38_3545 PF00378 Enoyl-CoA hydratase/isomerase BF38_3547 PF10763 Protein of unknown function (DUF2584) BF38_3548 PF12320 Type 5 capsule protein repressor C-terminal domain BF38_3548 PF00149 Calcineurin-like phosphoesterase BF38_3549 PF13476 AAA domain BF38_355 PF00365 Phosphofructokinase BF38_3550 PF01022 Bacterial regulatory protein, arsR family BF38_3552 PF07690 Major Facilitator Superfamily BF38_3553 PF00106 short chain dehydrogenase BF38_3554 PF00425 chorismate binding enzyme BF38_3555 PF13193 AMP-binding enzyme C-terminal domain BF38_3555 PF00501 AMP-binding enzyme BF38_3556 PF00857 Isochorismatase family BF38_3556 PF00550 Phosphopantetheine attachment site BF38_3557 PF00501 AMP-binding enzyme BF38_3557 PF13193 AMP-binding enzyme C-terminal domain BF38_3557 PF00668 Condensation domain BF38_3557 PF00550 Phosphopantetheine attachment site BF38_3557 PF00975 Thioesterase domain BF38_3558 PF03621 MbtH-like protein BF38_3559 PF07690 Major Facilitator Superfamily BF38_356 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BF38_3562 PF00216 Bacterial DNA-binding protein BF38_3564 PF05163 DinB family BF38_3565 PF00082 Subtilase family BF38_3566 PF01235 Sodium:alanine symporter family BF38_3569 PF16291 Domain of unknown function (DUF4937 BF38_357 PF17848 Acetyl-coA carboxylase zinc finger domain BF38_357 PF01039 Carboxyl transferase domain BF38_3570 PF01479 S4 domain BF38_3570 PF00849 RNA pseudouridylate synthase BF38_3571 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF38_3571 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF38_3571 PF03129 Anticodon binding domain BF38_3571 PF02824 TGS domain BF38_3572 PF00005 ABC transporter BF38_3574 PF12146 Serine aminopeptidase, S33 BF38_3578 PF13649 Methyltransferase domain BF38_358 PF00392 Bacterial regulatory proteins, gntR family BF38_3585 PF00753 Metallo-beta-lactamase superfamily BF38_3585 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF38_3587 PF03176 MMPL family BF38_3589 PF00302 Chloramphenicol acetyltransferase BF38_359 PF03949 Malic enzyme, NAD binding domain BF38_359 PF00390 Malic enzyme, N-terminal domain BF38_3591 PF00583 Acetyltransferase (GNAT) family BF38_3599 PF13302 Acetyltransferase (GNAT) domain BF38_36 PF04551 GcpE protein BF38_360 PF14579 Helix-hairpin-helix motif BF38_360 PF01336 OB-fold nucleic acid binding domain BF38_360 PF02811 PHP domain BF38_360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF38_360 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF38_3601 PF00313 'Cold-shock' DNA-binding domain BF38_361 PF14034 Sporulation protein YtrH BF38_3612 PF03466 LysR substrate binding domain BF38_3612 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_3613 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF38_3613 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF38_3616 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_3616 PF03466 LysR substrate binding domain BF38_3617 PF03475 3-alpha domain BF38_3617 PF03473 MOSC domain BF38_3620 PF00664 ABC transporter transmembrane region BF38_3620 PF00005 ABC transporter BF38_3621 PF00664 ABC transporter transmembrane region BF38_3621 PF00005 ABC transporter BF38_3624 PF01810 LysE type translocator BF38_3625 PF01381 Helix-turn-helix BF38_3625 PF07883 Cupin domain BF38_363 PF01368 DHH family BF38_363 PF02272 DHHA1 domain BF38_3632 PF13291 ACT domain BF38_3632 PF02824 TGS domain BF38_3632 PF04607 Region found in RelA / SpoT proteins BF38_3634 PF00890 FAD binding domain BF38_3635 PF08281 Sigma-70, region 4 BF38_3635 PF12680 SnoaL-like domain BF38_3635 PF04542 Sigma-70 region 2 BF38_364 PF14007 YtpI-like protein BF38_3641 PF02638 Glycosyl hydrolase-like 10 BF38_3643 PF02378 Phosphotransferase system, EIIC BF38_3645 PF03702 Anhydro-N-acetylmuramic acid kinase BF38_3646 PF01869 BadF/BadG/BcrA/BcrD ATPase family BF38_3647 PF02660 Glycerol-3-phosphate acyltransferase BF38_3648 PF00266 Aminotransferase class-V BF38_3649 PF00291 Pyridoxal-phosphate dependent enzyme BF38_3653 PF00753 Metallo-beta-lactamase superfamily BF38_3653 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF38_3656 PF00270 DEAD/DEAH box helicase BF38_3656 PF00271 Helicase conserved C-terminal domain BF38_3658 PF17932 Tetracyclin repressor-like, C-terminal domain BF38_3658 PF00440 Bacterial regulatory proteins, tetR family BF38_367 PF00571 CBS domain BF38_367 PF03061 Thioesterase superfamily BF38_367 PF07085 DRTGG domain BF38_367 PF00392 Bacterial regulatory proteins, gntR family BF38_3670 PF14659 Phage integrase, N-terminal SAM-like domain BF38_3670 PF00589 Phage integrase family BF38_3674 PF02687 FtsX-like permease family BF38_3674 PF12704 MacB-like periplasmic core domain BF38_3674 PF00005 ABC transporter BF38_3675 PF03848 Tellurite resistance protein TehB BF38_3675 PF09313 Domain of unknown function (DUF1971) BF38_3677 PF08241 Methyltransferase domain BF38_3678 PF00205 Thiamine pyrophosphate enzyme, central domain BF38_3678 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF38_3678 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF38_3679 PF12802 MarR family BF38_3680 PF00300 Histidine phosphatase superfamily (branch 1) BF38_3681 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BF38_3685 PF07687 Peptidase dimerisation domain BF38_3685 PF01546 Peptidase family M20/M25/M40 BF38_3689 PF08281 Sigma-70, region 4 BF38_3689 PF04542 Sigma-70 region 2 BF38_3691 PF00905 Penicillin binding protein transpeptidase domain BF38_3691 PF03717 Penicillin-binding Protein dimerisation domain BF38_3694 PF01569 PAP2 superfamily BF38_3695 PF00356 Bacterial regulatory proteins, lacI family BF38_3696 PF07690 Major Facilitator Superfamily BF38_3697 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF38_3697 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF38_3698 PF00294 pfkB family carbohydrate kinase BF38_3699 PF00171 Aldehyde dehydrogenase family BF38_37 PF01475 Ferric uptake regulator family BF38_370 PF01321 Creatinase/Prolidase N-terminal domain BF38_370 PF00557 Metallopeptidase family M24 BF38_3700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF38_3700 PF00205 Thiamine pyrophosphate enzyme, central domain BF38_3700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF38_3701 PF01261 Xylose isomerase-like TIM barrel BF38_3702 PF01116 Fructose-bisphosphate aldolase class-II BF38_3703 PF04962 KduI/IolB family BF38_3706 PF02872 5'-nucleotidase, C-terminal domain BF38_3706 PF00149 Calcineurin-like phosphoesterase BF38_3708 PF18801 response regulator aspartate phosphatase H, N terminal BF38_3709 PF01381 Helix-turn-helix BF38_371 PF11518 Protein of unknown function (DUF3221) BF38_3712 PF02557 D-alanyl-D-alanine carboxypeptidase BF38_3714 PF01520 N-acetylmuramoyl-L-alanine amidase BF38_3714 PF00395 S-layer homology domain BF38_3715 PF07968 Leukocidin/Hemolysin toxin family BF38_3716 PF00440 Bacterial regulatory proteins, tetR family BF38_3718 PF03707 Bacterial signalling protein N terminal repeat BF38_3718 PF00990 Diguanylate cyclase, GGDEF domain BF38_3718 PF00563 EAL domain BF38_3720 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_3721 PF00581 Rhodanese-like domain BF38_3724 PF00005 ABC transporter BF38_3726 PF08359 YsiA-like protein, C-terminal region BF38_3726 PF00440 Bacterial regulatory proteins, tetR family BF38_3729 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF38_3729 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF38_3729 PF02770 Acyl-CoA dehydrogenase, middle domain BF38_3730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF38_3730 PF00289 Biotin carboxylase, N-terminal domain BF38_3730 PF02785 Biotin carboxylase C-terminal domain BF38_3731 PF00364 Biotin-requiring enzyme BF38_3732 PF00682 HMGL-like BF38_3733 PF00378 Enoyl-CoA hydratase/isomerase BF38_3734 PF01039 Carboxyl transferase domain BF38_3735 PF00501 AMP-binding enzyme BF38_3735 PF13193 AMP-binding enzyme C-terminal domain BF38_3735 PF16177 Acetyl-coenzyme A synthetase N-terminus BF38_3737 PF00583 Acetyltransferase (GNAT) family BF38_3738 PF00485 Phosphoribulokinase / Uridine kinase family BF38_3740 PF05163 DinB family BF38_3741 PF07943 Penicillin-binding protein 5, C-terminal domain BF38_3741 PF00768 D-alanyl-D-alanine carboxypeptidase BF38_3742 PF00512 His Kinase A (phospho-acceptor) domain BF38_3742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_3743 PF00486 Transcriptional regulatory protein, C terminal BF38_3743 PF00072 Response regulator receiver domain BF38_3744 PF01966 HD domain BF38_3745 PF13021 Domain of unknown function (DUF3885) BF38_3746 PF01048 Phosphorylase superfamily BF38_375 PF07282 Putative transposase DNA-binding domain BF38_375 PF01385 Probable transposase BF38_375 PF12323 Helix-turn-helix domain BF38_3750 PF07504 Fungalysin/Thermolysin Propeptide Motif BF38_3750 PF01447 Thermolysin metallopeptidase, catalytic domain BF38_3750 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF38_3750 PF03413 Peptidase propeptide and YPEB domain BF38_3757 PF00144 Beta-lactamase BF38_3758 PF09278 MerR, DNA binding BF38_3758 PF00376 MerR family regulatory protein BF38_3759 PF07690 Major Facilitator Superfamily BF38_3763 PF01636 Phosphotransferase enzyme family BF38_3764 PF12833 Helix-turn-helix domain BF38_3767 PF00392 Bacterial regulatory proteins, gntR family BF38_3767 PF00155 Aminotransferase class I and II BF38_377 PF04542 Sigma-70 region 2 BF38_377 PF08281 Sigma-70, region 4 BF38_3770 PF08240 Alcohol dehydrogenase GroES-like domain BF38_3770 PF00107 Zinc-binding dehydrogenase BF38_3774 PF08450 SMP-30/Gluconolactonase/LRE-like region BF38_3776 PF01921 tRNA synthetases class I (K) BF38_3777 PF07486 Cell Wall Hydrolase BF38_3779 PF00072 Response regulator receiver domain BF38_3779 PF00486 Transcriptional regulatory protein, C terminal BF38_3780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_3785 PF00005 ABC transporter BF38_3786 PF02687 FtsX-like permease family BF38_379 PF12746 GNAT acetyltransferase BF38_3790 PF00742 Homoserine dehydrogenase BF38_3790 PF01842 ACT domain BF38_3790 PF03447 Homoserine dehydrogenase, NAD binding domain BF38_3791 PF00155 Aminotransferase class I and II BF38_3791 PF00392 Bacterial regulatory proteins, gntR family BF38_3792 PF07478 D-ala D-ala ligase C-terminus BF38_3792 PF01820 D-ala D-ala ligase N-terminus BF38_3793 PF03070 TENA/THI-4/PQQC family BF38_38 PF00950 ABC 3 transport family BF38_380 PF07883 Cupin domain BF38_3807 PF00067 Cytochrome P450 BF38_3809 PF00132 Bacterial transferase hexapeptide (six repeats) BF38_3810 PF07561 Domain of Unknown Function (DUF1540) BF38_3812 PF00067 Cytochrome P450 BF38_3815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_3815 PF13188 PAS domain BF38_3815 PF00512 His Kinase A (phospho-acceptor) domain BF38_3815 PF13426 PAS domain BF38_3815 PF00989 PAS fold BF38_3817 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF38_3818 PF01177 Asp/Glu/Hydantoin racemase BF38_3819 PF07155 ECF-type riboflavin transporter, S component BF38_382 PF01381 Helix-turn-helix BF38_3820 PF12558 ATP-binding cassette cobalt transporter BF38_3820 PF00005 ABC transporter BF38_3823 PF00512 His Kinase A (phospho-acceptor) domain BF38_3823 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_3826 PF08240 Alcohol dehydrogenase GroES-like domain BF38_3826 PF00107 Zinc-binding dehydrogenase BF38_3829 PF00144 Beta-lactamase BF38_3829 PF11954 Domain of unknown function (DUF3471) BF38_3832 PF02645 Uncharacterised protein, DegV family COG1307 BF38_3835 PF01965 DJ-1/PfpI family BF38_3839 PF00144 Beta-lactamase BF38_384 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF38_384 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF38_3841 PF07690 Major Facilitator Superfamily BF38_3845 PF03009 Glycerophosphoryl diester phosphodiesterase family BF38_3848 PF00155 Aminotransferase class I and II BF38_3848 PF00392 Bacterial regulatory proteins, gntR family BF38_3849 PF00892 EamA-like transporter family BF38_3850 PF01270 Glycosyl hydrolases family 8 BF38_3853 PF00293 NUDIX domain BF38_3857 PF07690 Major Facilitator Superfamily BF38_386 PF00582 Universal stress protein family BF38_3860 PF00293 NUDIX domain BF38_3860 PF09297 NADH pyrophosphatase zinc ribbon domain BF38_3861 PF00712 DNA polymerase III beta subunit, N-terminal domain BF38_3861 PF02768 DNA polymerase III beta subunit, C-terminal domain BF38_3861 PF02767 DNA polymerase III beta subunit, central domain BF38_3862 PF00293 NUDIX domain BF38_3866 PF12706 Beta-lactamase superfamily domain BF38_3870 PF09234 Domain of unknown function (DUF1963) BF38_3874 PF01734 Patatin-like phospholipase BF38_3875 PF08000 Bacterial PH domain BF38_3877 PF12867 DinB superfamily BF38_3880 PF02673 Bacitracin resistance protein BacA BF38_3882 PF01541 GIY-YIG catalytic domain BF38_3890 PF01266 FAD dependent oxidoreductase BF38_3899 PF07859 alpha/beta hydrolase fold BF38_39 PF00005 ABC transporter BF38_390 PF14698 Argininosuccinate lyase C-terminal BF38_390 PF00206 Lyase BF38_3900 PF00282 Pyridoxal-dependent decarboxylase conserved domain BF38_3901 PF00550 Phosphopantetheine attachment site BF38_3901 PF00668 Condensation domain BF38_3901 PF00501 AMP-binding enzyme BF38_3901 PF13193 AMP-binding enzyme C-terminal domain BF38_3903 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF38_3903 PF00128 Alpha amylase, catalytic domain BF38_3903 PF03714 Bacterial pullanase-associated domain BF38_3904 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF38_3904 PF01447 Thermolysin metallopeptidase, catalytic domain BF38_3904 PF03413 Peptidase propeptide and YPEB domain BF38_3904 PF07504 Fungalysin/Thermolysin Propeptide Motif BF38_3908 PF00344 SecY translocase BF38_3909 PF00308 Bacterial dnaA protein BF38_3909 PF08299 Bacterial dnaA protein helix-turn-helix BF38_3909 PF11638 DnaA N-terminal domain BF38_391 PF00764 Arginosuccinate synthase BF38_3910 PF00892 EamA-like transporter family BF38_3911 PF00155 Aminotransferase class I and II BF38_3911 PF00392 Bacterial regulatory proteins, gntR family BF38_3912 PF00561 alpha/beta hydrolase fold BF38_3918 PF06081 Aromatic acid exporter family member 1 BF38_3921 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF38_3922 PF03413 Peptidase propeptide and YPEB domain BF38_3922 PF14620 YpeB sporulation BF38_3923 PF01471 Putative peptidoglycan binding domain BF38_3923 PF07486 Cell Wall Hydrolase BF38_3926 PF03301 Tryptophan 2,3-dioxygenase BF38_3927 PF04199 Putative cyclase BF38_3928 PF00266 Aminotransferase class-V BF38_3929 PF00440 Bacterial regulatory proteins, tetR family BF38_3929 PF08359 YsiA-like protein, C-terminal region BF38_3930 PF00293 NUDIX domain BF38_3930 PF13344 Haloacid dehalogenase-like hydrolase BF38_3935 PF00158 Sigma-54 interaction domain BF38_3935 PF02954 Bacterial regulatory protein, Fis family BF38_3935 PF01590 GAF domain BF38_3938 PF13302 Acetyltransferase (GNAT) domain BF38_3939 PF00455 DeoR C terminal sensor domain BF38_3939 PF08220 DeoR-like helix-turn-helix domain BF38_3943 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF38_3943 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_3944 PF00364 Biotin-requiring enzyme BF38_3944 PF02817 e3 binding domain BF38_3944 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF38_3945 PF02779 Transketolase, pyrimidine binding domain BF38_3945 PF02780 Transketolase, C-terminal domain BF38_3946 PF00676 Dehydrogenase E1 component BF38_3948 PF00106 short chain dehydrogenase BF38_3949 PF13673 Acetyltransferase (GNAT) domain BF38_3949 PF04229 GrpB protein BF38_395 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_395 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_3950 PF00485 Phosphoribulokinase / Uridine kinase family BF38_3956 PF00528 Binding-protein-dependent transport system inner membrane component BF38_3957 PF00005 ABC transporter BF38_3957 PF00571 CBS domain BF38_3958 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BF38_3959 PF00574 Clp protease BF38_396 PF12787 EcsC protein family BF38_3962 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BF38_3963 PF13673 Acetyltransferase (GNAT) domain BF38_3964 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF38_3964 PF18416 N-acetylglucosamine binding protein domain 2 BF38_3965 PF01202 Shikimate kinase BF38_3967 PF10990 Protein of unknown function (DUF2809) BF38_3968 PF08241 Methyltransferase domain BF38_3972 PF00753 Metallo-beta-lactamase superfamily BF38_3972 PF13567 Domain of unknown function (DUF4131) BF38_3972 PF03772 Competence protein BF38_3982 PF13538 UvrD-like helicase C-terminal domain BF38_3985 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BF38_3986 PF09382 RQC domain BF38_3986 PF00570 HRDC domain BF38_3986 PF00270 DEAD/DEAH box helicase BF38_3986 PF00271 Helicase conserved C-terminal domain BF38_3986 PF16124 RecQ zinc-binding BF38_399 PF00871 Acetokinase family BF38_3994 PF02833 DHHA2 domain BF38_3994 PF01368 DHH family BF38_3995 PF18416 N-acetylglucosamine binding protein domain 2 BF38_3995 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF38_3997 PF02627 Carboxymuconolactone decarboxylase family BF38_3998 PF01235 Sodium:alanine symporter family BF38_3999 PF00171 Aldehyde dehydrogenase family BF38_4 PF00375 Sodium:dicarboxylate symporter family BF38_40 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_40 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_400 PF02384 N-6 DNA Methylase BF38_4000 PF00701 Dihydrodipicolinate synthetase family BF38_4001 PF05544 Proline racemase BF38_4002 PF05544 Proline racemase BF38_4003 PF01266 FAD dependent oxidoreductase BF38_4004 PF13188 PAS domain BF38_4004 PF00158 Sigma-54 interaction domain BF38_4004 PF02954 Bacterial regulatory protein, Fis family BF38_4005 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_4005 PF04324 BFD-like [2Fe-2S] binding domain BF38_4007 PF04324 BFD-like [2Fe-2S] binding domain BF38_4007 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_401 PF08534 Redoxin BF38_4010 PF08876 Domain of unknown function (DUF1836) BF38_4011 PF09335 SNARE associated Golgi protein BF38_4014 PF04914 DltD protein BF38_4015 PF13302 Acetyltransferase (GNAT) domain BF38_4015 PF13673 Acetyltransferase (GNAT) domain BF38_4015 PF00958 GMP synthase C terminal domain BF38_4015 PF03352 Methyladenine glycosylase BF38_4015 PF00117 Glutamine amidotransferase class-I BF38_4016 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_4017 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BF38_4017 PF00877 NlpC/P60 family BF38_4018 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF38_4018 PF13378 Enolase C-terminal domain-like BF38_402 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF38_4025 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BF38_4025 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BF38_4026 PF16736 Single Cache-like BF38_4026 PF00989 PAS fold BF38_4026 PF00512 His Kinase A (phospho-acceptor) domain BF38_4026 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_4027 PF00486 Transcriptional regulatory protein, C terminal BF38_4027 PF00072 Response regulator receiver domain BF38_4031 PF01048 Phosphorylase superfamily BF38_4033 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF38_4034 PF01432 Peptidase family M3 BF38_4034 PF08439 Oligopeptidase F BF38_4036 PF02645 Uncharacterised protein, DegV family COG1307 BF38_404 PF01513 ATP-NAD kinase BF38_4040 PF07690 Major Facilitator Superfamily BF38_4042 PF04519 Polymer-forming cytoskeletal BF38_4043 PF13171 Protein of unknown function (DUF4004) BF38_4044 PF12793 Sugar transport-related sRNA regulator N-term BF38_4044 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_4045 PF07690 Major Facilitator Superfamily BF38_4049 PF04226 Transglycosylase associated protein BF38_405 PF07969 Amidohydrolase family BF38_4050 PF01156 Inosine-uridine preferring nucleoside hydrolase BF38_4052 PF08241 Methyltransferase domain BF38_4059 PF00155 Aminotransferase class I and II BF38_4060 PF07977 FabA-like domain BF38_4061 PF03630 Fumble BF38_4065 PF00005 ABC transporter BF38_407 PF13193 AMP-binding enzyme C-terminal domain BF38_407 PF00501 AMP-binding enzyme BF38_4074 PF01594 AI-2E family transporter BF38_4076 PF00296 Luciferase-like monooxygenase BF38_4077 PF00528 Binding-protein-dependent transport system inner membrane component BF38_4078 PF09084 NMT1/THI5 like BF38_4079 PF00005 ABC transporter BF38_408 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF38_4087 PF02522 Aminoglycoside 3-N-acetyltransferase BF38_409 PF02568 Thiamine biosynthesis protein (ThiI) BF38_409 PF02926 THUMP domain BF38_4092 PF13536 Putative multidrug resistance efflux transporter BF38_4093 PF12867 DinB superfamily BF38_4097 PF08713 DNA alkylation repair enzyme BF38_4099 PF01522 Polysaccharide deacetylase BF38_41 PF11116 Protein of unknown function (DUF2624) BF38_410 PF00266 Aminotransferase class-V BF38_4101 PF03741 Integral membrane protein TerC family BF38_4102 PF00884 Sulfatase BF38_4103 PF12848 ABC transporter BF38_4103 PF00005 ABC transporter BF38_4105 PF03176 MMPL family BF38_4106 PF16295 Tetracyclin repressor-like, C-terminal domain BF38_4106 PF00440 Bacterial regulatory proteins, tetR family BF38_4108 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF38_4109 PF01842 ACT domain BF38_4109 PF02153 Prephenate dehydrogenase BF38_411 PF06160 Septation ring formation regulator, EzrA BF38_4110 PF00155 Aminotransferase class I and II BF38_4111 PF01264 Chorismate synthase BF38_4112 PF00793 DAHP synthetase I family BF38_4112 PF01817 Chorismate mutase type II BF38_4116 PF01636 Phosphotransferase enzyme family BF38_4119 PF01476 LysM domain BF38_4119 PF06725 3D domain BF38_412 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_412 PF03466 LysR substrate binding domain BF38_4122 PF00378 Enoyl-CoA hydratase/isomerase BF38_4123 PF13193 AMP-binding enzyme C-terminal domain BF38_4123 PF00501 AMP-binding enzyme BF38_4124 PF02954 Bacterial regulatory protein, Fis family BF38_4124 PF00158 Sigma-54 interaction domain BF38_4124 PF00989 PAS fold BF38_4127 PF06039 Malate:quinone oxidoreductase (Mqo) BF38_4128 PF13407 Periplasmic binding protein domain BF38_4129 PF02653 Branched-chain amino acid transport system / permease component BF38_413 PF00892 EamA-like transporter family BF38_4130 PF02653 Branched-chain amino acid transport system / permease component BF38_4131 PF00005 ABC transporter BF38_4132 PF04198 Putative sugar-binding domain BF38_4132 PF00325 Bacterial regulatory proteins, crp family BF38_4133 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF38_4133 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF38_4135 PF01791 DeoC/LacD family aldolase BF38_4139 PF03992 Antibiotic biosynthesis monooxygenase BF38_414 PF00440 Bacterial regulatory proteins, tetR family BF38_4143 PF01773 Na+ dependent nucleoside transporter N-terminus BF38_4143 PF07662 Na+ dependent nucleoside transporter C-terminus BF38_4144 PF00171 Aldehyde dehydrogenase family BF38_4145 PF00696 Amino acid kinase family BF38_4145 PF01472 PUA domain BF38_4146 PF03807 NADP oxidoreductase coenzyme F420-dependent BF38_4146 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF38_4149 PF01546 Peptidase family M20/M25/M40 BF38_415 PF13185 GAF domain BF38_4150 PF09339 IclR helix-turn-helix domain BF38_4150 PF01614 Bacterial transcriptional regulator BF38_4151 PF00324 Amino acid permease BF38_4152 PF01139 tRNA-splicing ligase RtcB BF38_4153 PF00487 Fatty acid desaturase BF38_4154 PF00245 Alkaline phosphatase BF38_4155 PF11188 Protein of unknown function (DUF2975) BF38_4156 PF13443 Cro/C1-type HTH DNA-binding domain BF38_4159 PF10086 YhfC intramembrane metalloprotease BF38_416 PF01053 Cys/Met metabolism PLP-dependent enzyme BF38_4161 PF00072 Response regulator receiver domain BF38_4161 PF04397 LytTr DNA-binding domain BF38_4163 PF13302 Acetyltransferase (GNAT) domain BF38_4164 PF12681 Glyoxalase-like domain BF38_4169 PF07726 ATPase family associated with various cellular activities (AAA) BF38_4169 PF17863 AAA lid domain BF38_417 PF01479 S4 domain BF38_417 PF00163 Ribosomal protein S4/S9 N-terminal domain BF38_4172 PF07690 Major Facilitator Superfamily BF38_4174 PF00535 Glycosyl transferase family 2 BF38_4177 PF00535 Glycosyl transferase family 2 BF38_4178 PF00535 Glycosyl transferase family 2 BF38_4180 PF00202 Aminotransferase class-III BF38_4181 PF06628 Catalase-related immune-responsive BF38_4181 PF00199 Catalase BF38_4183 PF13382 Adenine deaminase C-terminal domain BF38_4183 PF01979 Amidohydrolase family BF38_4184 PF00144 Beta-lactamase BF38_4188 PF17863 AAA lid domain BF38_4188 PF07726 ATPase family associated with various cellular activities (AAA) BF38_4190 PF00881 Nitroreductase family BF38_4191 PF01047 MarR family BF38_4192 PF00009 Elongation factor Tu GTP binding domain BF38_4192 PF00679 Elongation factor G C-terminus BF38_4192 PF14492 Elongation Factor G, domain II BF38_4192 PF03764 Elongation factor G, domain IV BF38_4193 PF07883 Cupin domain BF38_4195 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF38_4197 PF01494 FAD binding domain BF38_4199 PF13193 AMP-binding enzyme C-terminal domain BF38_4199 PF00501 AMP-binding enzyme BF38_42 PF01261 Xylose isomerase-like TIM barrel BF38_420 PF00579 tRNA synthetases class I (W and Y) BF38_420 PF01479 S4 domain BF38_4200 PF02803 Thiolase, C-terminal domain BF38_4200 PF00108 Thiolase, N-terminal domain BF38_4201 PF00378 Enoyl-CoA hydratase/isomerase BF38_4202 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF38_4202 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF38_4203 PF00232 Glycosyl hydrolase family 1 BF38_4204 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF38_4205 PF02378 Phosphotransferase system, EIIC BF38_4206 PF00300 Histidine phosphatase superfamily (branch 1) BF38_4208 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF38_4210 PF07905 Purine catabolism regulatory protein-like family BF38_4210 PF17853 GGDEF-like domain BF38_4210 PF13556 PucR C-terminal helix-turn-helix domain BF38_4211 PF07690 Major Facilitator Superfamily BF38_4212 PF07969 Amidohydrolase family BF38_4214 PF00293 NUDIX domain BF38_4217 PF00005 ABC transporter BF38_4218 PF00392 Bacterial regulatory proteins, gntR family BF38_4219 PF16363 GDP-mannose 4,6 dehydratase BF38_422 PF04542 Sigma-70 region 2 BF38_422 PF08281 Sigma-70, region 4 BF38_4220 PF00005 ABC transporter BF38_4225 PF12833 Helix-turn-helix domain BF38_4226 PF00583 Acetyltransferase (GNAT) family BF38_4229 PF00892 EamA-like transporter family BF38_4230 PF00155 Aminotransferase class I and II BF38_4230 PF00392 Bacterial regulatory proteins, gntR family BF38_4231 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BF38_4232 PF13031 Protein of unknown function (DUF3892) BF38_4239 PF01925 Sulfite exporter TauE/SafE BF38_424 PF13193 AMP-binding enzyme C-terminal domain BF38_424 PF00501 AMP-binding enzyme BF38_4240 PF13302 Acetyltransferase (GNAT) domain BF38_4241 PF00324 Amino acid permease BF38_4243 PF08713 DNA alkylation repair enzyme BF38_4244 PF10898 Protein of unknown function (DUF2716) BF38_4248 PF10502 Signal peptidase, peptidase S26 BF38_425 PF00583 Acetyltransferase (GNAT) family BF38_4251 PF02146 Sir2 family BF38_4252 PF01470 Pyroglutamyl peptidase BF38_4255 PF03746 LamB/YcsF family BF38_4256 PF02626 Carboxyltransferase domain, subdomain A and B BF38_4257 PF02682 Carboxyltransferase domain, subdomain C and D BF38_4258 PF01614 Bacterial transcriptional regulator BF38_4258 PF09339 IclR helix-turn-helix domain BF38_4259 PF10502 Signal peptidase, peptidase S26 BF38_426 PF00571 CBS domain BF38_4260 PF03932 CutC family BF38_4261 PF07454 Stage II sporulation protein P (SpoIIP) BF38_4264 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BF38_4264 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF38_4264 PF02770 Acyl-CoA dehydrogenase, middle domain BF38_427 PF00850 Histone deacetylase domain BF38_4271 PF02915 Rubrerythrin BF38_4273 PF00440 Bacterial regulatory proteins, tetR family BF38_4274 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BF38_4274 PF00391 PEP-utilising enzyme, mobile domain BF38_4276 PF00753 Metallo-beta-lactamase superfamily BF38_4279 PF07875 Coat F domain BF38_428 PF00561 alpha/beta hydrolase fold BF38_4281 PF08892 YqcI/YcgG family BF38_4282 PF01810 LysE type translocator BF38_4283 PF00324 Amino acid permease BF38_4285 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF38_4286 PF10710 Protein of unknown function (DUF2512) BF38_4287 PF11553 Protein of unknown function (DUF3231) BF38_4288 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF38_4289 PF13823 Alcohol dehydrogenase GroES-associated BF38_4289 PF00107 Zinc-binding dehydrogenase BF38_4289 PF08240 Alcohol dehydrogenase GroES-like domain BF38_4291 PF00206 Lyase BF38_4291 PF10415 Fumarase C C-terminus BF38_4292 PF17763 Glutaminase/Asparaginase C-terminal domain BF38_4292 PF00710 Asparaginase, N-terminal BF38_4293 PF01381 Helix-turn-helix BF38_4295 PF05504 Spore germination B3/ GerAC like, C-terminal BF38_4296 PF03845 Spore germination protein BF38_4297 PF03323 Bacillus/Clostridium GerA spore germination protein BF38_4298 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_4298 PF13426 PAS domain BF38_4298 PF00512 His Kinase A (phospho-acceptor) domain BF38_4298 PF00989 PAS fold BF38_4298 PF13188 PAS domain BF38_4299 PF05791 Bacillus haemolytic enterotoxin (HBL) BF38_43 PF00270 DEAD/DEAH box helicase BF38_43 PF00271 Helicase conserved C-terminal domain BF38_430 PF00072 Response regulator receiver domain BF38_430 PF00486 Transcriptional regulatory protein, C terminal BF38_4300 PF05791 Bacillus haemolytic enterotoxin (HBL) BF38_4303 PF17853 GGDEF-like domain BF38_4303 PF12833 Helix-turn-helix domain BF38_4304 PF01541 GIY-YIG catalytic domain BF38_4304 PF02151 UvrB/uvrC motif BF38_4304 PF12826 Helix-hairpin-helix motif BF38_4304 PF08459 UvrC Helix-hairpin-helix N-terminal BF38_4305 PF13520 Amino acid permease BF38_4306 PF05525 Branched-chain amino acid transport protein BF38_4307 PF03807 NADP oxidoreductase coenzyme F420-dependent BF38_4307 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF38_4308 PF13564 DoxX-like family BF38_431 PF00512 His Kinase A (phospho-acceptor) domain BF38_431 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_431 PF00672 HAMP domain BF38_431 PF13426 PAS domain BF38_4310 PF05504 Spore germination B3/ GerAC like, C-terminal BF38_4311 PF03845 Spore germination protein BF38_4312 PF03323 Bacillus/Clostridium GerA spore germination protein BF38_4313 PF00072 Response regulator receiver domain BF38_4313 PF08664 YcbB domain BF38_4314 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_4315 PF04960 Glutaminase BF38_4316 PF01235 Sodium:alanine symporter family BF38_4318 PF02872 5'-nucleotidase, C-terminal domain BF38_4318 PF00149 Calcineurin-like phosphoesterase BF38_4318 PF17936 Bacterial Ig domain BF38_4319 PF00199 Catalase BF38_4319 PF06628 Catalase-related immune-responsive BF38_432 PF12796 Ankyrin repeats (3 copies) BF38_4320 PF00561 alpha/beta hydrolase fold BF38_4321 PF00857 Isochorismatase family BF38_4322 PF00857 Isochorismatase family BF38_4324 PF01979 Amidohydrolase family BF38_4325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_4325 PF03466 LysR substrate binding domain BF38_4326 PF01047 MarR family BF38_4327 PF01544 CorA-like Mg2+ transporter protein BF38_433 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF38_4330 PF11181 Heat induced stress protein YflT BF38_4333 PF03073 TspO/MBR family BF38_4334 PF03441 FAD binding domain of DNA photolyase BF38_4334 PF00875 DNA photolyase BF38_4336 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BF38_4337 PF00361 Proton-conducting membrane transporter BF38_4337 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF38_4338 PF10057 Uncharacterized conserved protein (DUF2294) BF38_434 PF01741 Large-conductance mechanosensitive channel, MscL BF38_4340 PF01040 UbiA prenyltransferase family BF38_4341 PF00561 alpha/beta hydrolase fold BF38_4342 PF12996 DUF based on E. rectale Gene description (DUF3880) BF38_4343 PF00005 ABC transporter BF38_4347 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF38_4348 PF01758 Sodium Bile acid symporter family BF38_4349 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_4350 PF01022 Bacterial regulatory protein, arsR family BF38_4353 PF04892 VanZ like family BF38_4354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_4354 PF00512 His Kinase A (phospho-acceptor) domain BF38_4354 PF00672 HAMP domain BF38_4355 PF00486 Transcriptional regulatory protein, C terminal BF38_4355 PF00072 Response regulator receiver domain BF38_4356 PF00583 Acetyltransferase (GNAT) family BF38_4357 PF07993 Male sterility protein BF38_4357 PF00550 Phosphopantetheine attachment site BF38_4358 PF18665 Tetracyclin repressor-like, C-terminal domain BF38_4358 PF00440 Bacterial regulatory proteins, tetR family BF38_4360 PF01037 Lrp/AsnC ligand binding domain BF38_4363 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_4366 PF12833 Helix-turn-helix domain BF38_4366 PF02805 Metal binding domain of Ada BF38_4368 PF00144 Beta-lactamase BF38_4371 PF12802 MarR family BF38_4372 PF00667 FAD binding domain BF38_4372 PF00258 Flavodoxin BF38_4372 PF00175 Oxidoreductase NAD-binding domain BF38_4372 PF00067 Cytochrome P450 BF38_4373 PF07690 Major Facilitator Superfamily BF38_4378 PF00072 Response regulator receiver domain BF38_4378 PF00486 Transcriptional regulatory protein, C terminal BF38_4379 PF00672 HAMP domain BF38_4379 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_4379 PF00512 His Kinase A (phospho-acceptor) domain BF38_4384 PF00291 Pyridoxal-phosphate dependent enzyme BF38_4386 PF00144 Beta-lactamase BF38_4389 PF00753 Metallo-beta-lactamase superfamily BF38_439 PF00356 Bacterial regulatory proteins, lacI family BF38_4390 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BF38_4392 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF38_4392 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF38_4395 PF02073 Thermophilic metalloprotease (M29) BF38_4397 PF13411 MerR HTH family regulatory protein BF38_440 PF07537 CamS sex pheromone cAM373 precursor BF38_4402 PF00005 ABC transporter BF38_4403 PF02687 FtsX-like permease family BF38_4406 PF00512 His Kinase A (phospho-acceptor) domain BF38_4406 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_4406 PF00672 HAMP domain BF38_4407 PF00486 Transcriptional regulatory protein, C terminal BF38_4407 PF00072 Response regulator receiver domain BF38_4408 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_4408 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_4409 PF07690 Major Facilitator Superfamily BF38_441 PF11009 Protein of unknown function (DUF2847) BF38_4410 PF02589 LUD domain BF38_4411 PF02589 LUD domain BF38_4411 PF13183 4Fe-4S dicluster domain BF38_4411 PF11870 Domain of unknown function (DUF3390) BF38_4412 PF02754 Cysteine-rich domain BF38_4413 PF03466 LysR substrate binding domain BF38_4413 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_4415 PF02016 LD-carboxypeptidase N-terminal domain BF38_4415 PF17676 LD-carboxypeptidase C-terminal domain BF38_4419 PF07690 Major Facilitator Superfamily BF38_4420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF38_4420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF38_4421 PF05116 Sucrose-6F-phosphate phosphohydrolase BF38_4422 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF38_4423 PF00356 Bacterial regulatory proteins, lacI family BF38_4424 PF18801 response regulator aspartate phosphatase H, N terminal BF38_4428 PF11798 IMS family HHH motif BF38_4428 PF00817 impB/mucB/samB family BF38_4428 PF11799 impB/mucB/samB family C-terminal domain BF38_443 PF02073 Thermophilic metalloprotease (M29) BF38_4431 PF00672 HAMP domain BF38_4431 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_4431 PF02743 Cache domain BF38_4432 PF13302 Acetyltransferase (GNAT) domain BF38_4435 PF03313 Serine dehydratase alpha chain BF38_4436 PF03315 Serine dehydratase beta chain BF38_4436 PF01842 ACT domain BF38_4437 PF00202 Aminotransferase class-III BF38_4438 PF00708 Acylphosphatase BF38_4438 PF07503 HypF finger BF38_4438 PF01300 Telomere recombination BF38_4438 PF17788 HypF Kae1-like domain BF38_4439 PF00586 AIR synthase related protein, N-terminal domain BF38_4439 PF02769 AIR synthase related protein, C-terminal domain BF38_4440 PF00857 Isochorismatase family BF38_4441 PF01037 Lrp/AsnC ligand binding domain BF38_4442 PF13520 Amino acid permease BF38_4445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF38_4445 PF01842 ACT domain BF38_4445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF38_4446 PF00266 Aminotransferase class-V BF38_4449 PF07883 Cupin domain BF38_4450 PF01497 Periplasmic binding protein BF38_4450 PF12833 Helix-turn-helix domain BF38_4451 PF01804 Penicillin amidase BF38_4454 PF01476 LysM domain BF38_4454 PF01471 Putative peptidoglycan binding domain BF38_4454 PF01510 N-acetylmuramoyl-L-alanine amidase BF38_4461 PF14044 NETI protein BF38_4462 PF07690 Major Facilitator Superfamily BF38_4463 PF12697 Alpha/beta hydrolase family BF38_4464 PF01047 MarR family BF38_4465 PF07690 Major Facilitator Superfamily BF38_4467 PF17314 Family of unknown function (DUF5360) BF38_4468 PF00893 Small Multidrug Resistance protein BF38_4469 PF00440 Bacterial regulatory proteins, tetR family BF38_447 PF13302 Acetyltransferase (GNAT) domain BF38_4470 PF17440 Thiol-activated cytolysin beta sandwich domain BF38_4470 PF01289 Thiol-activated cytolysin BF38_4471 PF02667 Short chain fatty acid transporter BF38_4473 PF02525 Flavodoxin-like fold BF38_4477 PF14256 YwiC-like protein BF38_4479 PF00005 ABC transporter BF38_448 PF00892 EamA-like transporter family BF38_4480 PF02361 Cobalt transport protein BF38_4483 PF03737 Aldolase/RraA BF38_4484 PF03606 C4-dicarboxylate anaerobic carrier BF38_4487 PF07690 Major Facilitator Superfamily BF38_4488 PF00440 Bacterial regulatory proteins, tetR family BF38_449 PF13411 MerR HTH family regulatory protein BF38_4490 PF01381 Helix-turn-helix BF38_4491 PF04073 Aminoacyl-tRNA editing domain BF38_4492 PF03129 Anticodon binding domain BF38_4492 PF13393 Histidyl-tRNA synthetase BF38_4495 PF01638 HxlR-like helix-turn-helix BF38_4496 PF00881 Nitroreductase family BF38_4498 PF02887 Pyruvate kinase, alpha/beta domain BF38_4498 PF00224 Pyruvate kinase, barrel domain BF38_4498 PF00391 PEP-utilising enzyme, mobile domain BF38_45 PF02401 LytB protein BF38_450 PF08245 Mur ligase middle domain BF38_450 PF02875 Mur ligase family, glutamate ligase domain BF38_450 PF01225 Mur ligase family, catalytic domain BF38_4502 PF00005 ABC transporter BF38_4507 PF13419 Haloacid dehalogenase-like hydrolase BF38_4512 PF00293 NUDIX domain BF38_4512 PF13344 Haloacid dehalogenase-like hydrolase BF38_4514 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_4515 PF00480 ROK family BF38_4516 PF07690 Major Facilitator Superfamily BF38_4517 PF14602 Hexapeptide repeat of succinyl-transferase BF38_4517 PF12464 Maltose acetyltransferase BF38_4519 PF00005 ABC transporter BF38_4519 PF02687 FtsX-like permease family BF38_4519 PF12704 MacB-like periplasmic core domain BF38_452 PF01580 FtsK/SpoIIIE family BF38_452 PF09397 Ftsk gamma domain BF38_452 PF17854 FtsK alpha domain BF38_4521 PF00579 tRNA synthetases class I (W and Y) BF38_4522 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF38_4522 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF38_4522 PF13288 DXP reductoisomerase C-terminal domain BF38_4523 PF01594 AI-2E family transporter BF38_4527 PF08241 Methyltransferase domain BF38_4529 PF07690 Major Facilitator Superfamily BF38_4533 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_4535 PF01595 Cyclin M transmembrane N-terminal domain BF38_4535 PF00571 CBS domain BF38_4535 PF03471 Transporter associated domain BF38_4536 PF13411 MerR HTH family regulatory protein BF38_4537 PF00892 EamA-like transporter family BF38_4538 PF00805 Pentapeptide repeats (8 copies) BF38_4539 PF06906 Protein of unknown function (DUF1272) BF38_454 PF14794 Domain of unknown function (DUF4479) BF38_454 PF01588 Putative tRNA binding domain BF38_4540 PF10282 Lactonase, 7-bladed beta-propeller BF38_4541 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF38_4541 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF38_4542 PF02447 GntP family permease BF38_4543 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF38_4544 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF38_4544 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF38_4545 PF02780 Transketolase, C-terminal domain BF38_4545 PF02779 Transketolase, pyrimidine binding domain BF38_4545 PF00456 Transketolase, thiamine diphosphate binding domain BF38_4546 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BF38_4546 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BF38_4548 PF00296 Luciferase-like monooxygenase BF38_4549 PF08240 Alcohol dehydrogenase GroES-like domain BF38_4549 PF00107 Zinc-binding dehydrogenase BF38_455 PF07285 Protein of unknown function (DUF1444) BF38_4551 PF00106 short chain dehydrogenase BF38_4552 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF38_4552 PF01447 Thermolysin metallopeptidase, catalytic domain BF38_4552 PF03413 Peptidase propeptide and YPEB domain BF38_4552 PF07504 Fungalysin/Thermolysin Propeptide Motif BF38_4556 PF00248 Aldo/keto reductase family BF38_4557 PF03928 Haem-degrading BF38_456 PF00085 Thioredoxin BF38_4564 PF03960 ArsC family BF38_4565 PF01638 HxlR-like helix-turn-helix BF38_4566 PF00392 Bacterial regulatory proteins, gntR family BF38_4566 PF07702 UTRA domain BF38_4567 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF38_4567 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF38_4569 PF01638 HxlR-like helix-turn-helix BF38_457 PF01931 Protein of unknown function DUF84 BF38_4570 PF01638 HxlR-like helix-turn-helix BF38_4571 PF00248 Aldo/keto reductase family BF38_4578 PF02567 Phenazine biosynthesis-like protein BF38_458 PF05343 M42 glutamyl aminopeptidase BF38_4584 PF00501 AMP-binding enzyme BF38_4584 PF13193 AMP-binding enzyme C-terminal domain BF38_4585 PF02525 Flavodoxin-like fold BF38_4586 PF01638 HxlR-like helix-turn-helix BF38_4587 PF01022 Bacterial regulatory protein, arsR family BF38_4588 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BF38_4588 PF01522 Polysaccharide deacetylase BF38_4589 PF12791 Anti-sigma factor N-terminus BF38_4590 PF04542 Sigma-70 region 2 BF38_4591 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BF38_4591 PF00535 Glycosyl transferase family 2 BF38_4593 PF00440 Bacterial regulatory proteins, tetR family BF38_4597 PF05656 Protein of unknown function (DUF805) BF38_4598 PF01061 ABC-2 type transporter BF38_4599 PF13732 Domain of unknown function (DUF4162) BF38_4599 PF00005 ABC transporter BF38_46 PF01784 NIF3 (NGG1p interacting factor 3) BF38_460 PF00753 Metallo-beta-lactamase superfamily BF38_4602 PF03063 Prismane/CO dehydrogenase family BF38_4605 PF00753 Metallo-beta-lactamase superfamily BF38_461 PF02390 Putative methyltransferase BF38_4611 PF00144 Beta-lactamase BF38_4619 PF00753 Metallo-beta-lactamase superfamily BF38_462 PF14165 YtzH-like protein BF38_4620 PF08240 Alcohol dehydrogenase GroES-like domain BF38_4620 PF00107 Zinc-binding dehydrogenase BF38_4621 PF00324 Amino acid permease BF38_4622 PF07690 Major Facilitator Superfamily BF38_4627 PF02585 GlcNAc-PI de-N-acetylase BF38_4628 PF08830 Protein of unknown function (DUF1806) BF38_4629 PF03600 Citrate transporter BF38_463 PF01636 Phosphotransferase enzyme family BF38_4632 PF01497 Periplasmic binding protein BF38_4633 PF01032 FecCD transport family BF38_4634 PF01032 FecCD transport family BF38_4635 PF05675 Protein of unknown function (DUF817) BF38_4636 PF02567 Phenazine biosynthesis-like protein BF38_464 PF00128 Alpha amylase, catalytic domain BF38_464 PF17999 Pullulanase N1-terminal domain BF38_464 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF38_4640 PF10901 Protein of unknown function (DUF2690) BF38_4642 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_4642 PF03466 LysR substrate binding domain BF38_4643 PF00107 Zinc-binding dehydrogenase BF38_4643 PF08240 Alcohol dehydrogenase GroES-like domain BF38_4646 PF01713 Smr domain BF38_4646 PF00488 MutS domain V BF38_4648 PF09154 Domain of unknown function (DUF1939) BF38_4648 PF00128 Alpha amylase, catalytic domain BF38_4649 PF00797 N-acetyltransferase BF38_465 PF02834 LigT like Phosphoesterase BF38_4650 PF08439 Oligopeptidase F BF38_4650 PF01432 Peptidase family M3 BF38_4651 PF00144 Beta-lactamase BF38_4653 PF07690 Major Facilitator Superfamily BF38_4654 PF03466 LysR substrate binding domain BF38_4654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_4657 PF03009 Glycerophosphoryl diester phosphodiesterase family BF38_466 PF01546 Peptidase family M20/M25/M40 BF38_4660 PF01494 FAD binding domain BF38_4661 PF01022 Bacterial regulatory protein, arsR family BF38_4662 PF08240 Alcohol dehydrogenase GroES-like domain BF38_4662 PF00107 Zinc-binding dehydrogenase BF38_4664 PF00665 Integrase core domain BF38_4664 PF13276 HTH-like domain BF38_4664 PF13333 Integrase core domain BF38_4665 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BF38_467 PF08220 DeoR-like helix-turn-helix domain BF38_4670 PF13276 HTH-like domain BF38_4670 PF00665 Integrase core domain BF38_4670 PF13333 Integrase core domain BF38_4671 PF04299 Putative FMN-binding domain BF38_4672 PF04229 GrpB protein BF38_4674 PF01758 Sodium Bile acid symporter family BF38_4675 PF02913 FAD linked oxidases, C-terminal domain BF38_4675 PF01565 FAD binding domain BF38_4679 PF00132 Bacterial transferase hexapeptide (six repeats) BF38_468 PF01479 S4 domain BF38_468 PF00849 RNA pseudouridylate synthase BF38_4680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF38_4681 PF00535 Glycosyl transferase family 2 BF38_4682 PF00378 Enoyl-CoA hydratase/isomerase BF38_4683 PF08453 Peptidase family M9 N-terminal BF38_4683 PF01752 Collagenase BF38_4683 PF18496 Collagenase G catalytic helper subdomain BF38_4684 PF02308 MgtC family BF38_4686 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_4687 PF04294 VanW like protein BF38_4689 PF13037 Domain of unknown function (DUF3898) BF38_4689 PF13039 Protein of unknown function (DUF3900) BF38_469 PF01943 Polysaccharide biosynthesis protein BF38_469 PF14667 Polysaccharide biosynthesis C-terminal domain BF38_4693 PF00313 'Cold-shock' DNA-binding domain BF38_4695 PF00258 Flavodoxin BF38_4697 PF00293 NUDIX domain BF38_4699 PF00132 Bacterial transferase hexapeptide (six repeats) BF38_47 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BF38_4702 PF00665 Integrase core domain BF38_4702 PF13276 HTH-like domain BF38_4702 PF13333 Integrase core domain BF38_4706 PF01551 Peptidase family M23 BF38_4706 PF04225 Opacity-associated protein A LysM-like domain BF38_4708 PF01183 Glycosyl hydrolases family 25 BF38_4708 PF01471 Putative peptidoglycan binding domain BF38_4709 PF04225 Opacity-associated protein A LysM-like domain BF38_4709 PF01551 Peptidase family M23 BF38_471 PF07690 Major Facilitator Superfamily BF38_4719 PF00665 Integrase core domain BF38_4719 PF13276 HTH-like domain BF38_4719 PF13333 Integrase core domain BF38_472 PF01022 Bacterial regulatory protein, arsR family BF38_4721 PF00106 short chain dehydrogenase BF38_4723 PF00206 Lyase BF38_4723 PF14698 Argininosuccinate lyase C-terminal BF38_4725 PF01156 Inosine-uridine preferring nucleoside hydrolase BF38_4726 PF00474 Sodium:solute symporter family BF38_4728 PF00171 Aldehyde dehydrogenase family BF38_473 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BF38_4730 PF14151 YfhD-like protein BF38_4731 PF13243 Squalene-hopene cyclase C-terminal domain BF38_4731 PF13249 Squalene-hopene cyclase N-terminal domain BF38_4732 PF02681 Divergent PAP2 family BF38_4733 PF00892 EamA-like transporter family BF38_4734 PF06961 Protein of unknown function (DUF1294) BF38_4737 PF10609 NUBPL iron-transfer P-loop NTPase BF38_4739 PF02391 MoaE protein BF38_4740 PF00994 Probable molybdopterin binding domain BF38_4740 PF03453 MoeA N-terminal region (domain I and II) BF38_4740 PF03454 MoeA C-terminal region (domain IV) BF38_4741 PF00899 ThiF family BF38_4742 PF01226 Formate/nitrite transporter BF38_4743 PF06463 Molybdenum Cofactor Synthesis C BF38_4743 PF04055 Radical SAM superfamily BF38_4744 PF02634 FdhD/NarQ family BF38_4745 PF10057 Uncharacterized conserved protein (DUF2294) BF38_4746 PF07849 Protein of unknown function (DUF1641) BF38_4747 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF38_4747 PF00384 Molybdopterin oxidoreductase BF38_4747 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF38_4747 PF01568 Molydopterin dinucleotide binding domain BF38_4747 PF00037 4Fe-4S binding domain BF38_4749 PF03323 Bacillus/Clostridium GerA spore germination protein BF38_475 PF10957 Sporulation protein Cse60 BF38_4757 PF08241 Methyltransferase domain BF38_4758 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_4761 PF00665 Integrase core domain BF38_4761 PF13333 Integrase core domain BF38_4761 PF13276 HTH-like domain BF38_4762 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_4763 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_4764 PF00375 Sodium:dicarboxylate symporter family BF38_4765 PF03816 Cell envelope-related transcriptional attenuator domain BF38_4767 PF04542 Sigma-70 region 2 BF38_4767 PF08281 Sigma-70, region 4 BF38_4769 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_477 PF02559 CarD-like/TRCF domain BF38_4771 PF00005 ABC transporter BF38_4771 PF13732 Domain of unknown function (DUF4162) BF38_4773 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF38_4773 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF38_4774 PF00521 DNA gyrase/topoisomerase IV, subunit A BF38_4774 PF03989 DNA gyrase C-terminal domain, beta-propeller BF38_4775 PF00986 DNA gyrase B subunit, carboxyl terminus BF38_4775 PF01751 Toprim domain BF38_4775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_4775 PF00204 DNA gyrase B BF38_4776 PF13380 CoA binding domain BF38_4777 PF13180 PDZ domain BF38_4778 PF00486 Transcriptional regulatory protein, C terminal BF38_4778 PF00072 Response regulator receiver domain BF38_4779 PF04055 Radical SAM superfamily BF38_4780 PF13597 Anaerobic ribonucleoside-triphosphate reductase BF38_4780 PF03477 ATP cone domain BF38_4781 PF02660 Glycerol-3-phosphate acyltransferase BF38_4782 PF01521 Iron-sulphur cluster biosynthesis BF38_4783 PF03061 Thioesterase superfamily BF38_4784 PF01476 LysM domain BF38_4784 PF00704 Glycosyl hydrolases family 18 BF38_4786 PF08177 Small acid-soluble spore protein N family BF38_4787 PF13040 Fur-regulated basic protein B BF38_4788 PF00929 Exonuclease BF38_4788 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF38_4788 PF02811 PHP domain BF38_4788 PF11490 DNA polymerase III polC-type N-terminus II BF38_4788 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF38_4788 PF14579 Helix-hairpin-helix motif BF38_4789 PF00578 AhpC/TSA family BF38_479 PF06800 Sugar transport protein BF38_4791 PF00664 ABC transporter transmembrane region BF38_4791 PF00005 ABC transporter BF38_4791 PF03412 Peptidase C39 family BF38_4792 PF00694 Aconitase C-terminal domain BF38_4792 PF00330 Aconitase family (aconitate hydratase) BF38_4794 PF01522 Polysaccharide deacetylase BF38_4796 PF08179 Small acid-soluble spore protein P family BF38_4798 PF07690 Major Facilitator Superfamily BF38_48 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF38_4800 PF02272 DHHA1 domain BF38_4800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF38_4800 PF01411 tRNA synthetases class II (A) BF38_4801 PF13344 Haloacid dehalogenase-like hydrolase BF38_4801 PF00293 NUDIX domain BF38_4803 PF00108 Thiolase, N-terminal domain BF38_4803 PF02803 Thiolase, C-terminal domain BF38_4804 PF13193 AMP-binding enzyme C-terminal domain BF38_4804 PF00501 AMP-binding enzyme BF38_4805 PF02632 BioY family BF38_4806 PF00501 AMP-binding enzyme BF38_4806 PF13193 AMP-binding enzyme C-terminal domain BF38_4809 PF05532 CsbD-like BF38_4815 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_4815 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_4817 PF13426 PAS domain BF38_4817 PF00989 PAS fold BF38_4817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_4817 PF00512 His Kinase A (phospho-acceptor) domain BF38_4817 PF13188 PAS domain BF38_4818 PF01738 Dienelactone hydrolase family BF38_4819 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_482 PF02391 MoaE protein BF38_4820 PF00474 Sodium:solute symporter family BF38_4821 PF01645 Conserved region in glutamate synthase BF38_4822 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF38_4823 PF02559 CarD-like/TRCF domain BF38_4824 PF00491 Arginase family BF38_4825 PF01979 Amidohydrolase family BF38_4826 PF01175 Urocanase Rossmann-like domain BF38_4826 PF17392 Urocanase C-terminal domain BF38_4826 PF17391 Urocanase N-terminal domain BF38_4827 PF00221 Aromatic amino acid lyase BF38_4828 PF09021 HutP BF38_483 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BF38_4830 PF01209 ubiE/COQ5 methyltransferase family BF38_4833 PF11084 Protein of unknown function (DUF2621) BF38_4836 PF07301 Protein of unknown function (DUF1453) BF38_4837 PF02683 Cytochrome C biogenesis protein transmembrane region BF38_484 PF03453 MoeA N-terminal region (domain I and II) BF38_484 PF03454 MoeA C-terminal region (domain IV) BF38_484 PF00994 Probable molybdopterin binding domain BF38_4841 PF00005 ABC transporter BF38_4843 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_4843 PF03466 LysR substrate binding domain BF38_4844 PF03788 LrgA family BF38_4845 PF04172 LrgB-like family BF38_4846 PF00293 NUDIX domain BF38_4846 PF13344 Haloacid dehalogenase-like hydrolase BF38_4848 PF01925 Sulfite exporter TauE/SafE BF38_485 PF01967 MoaC family BF38_4850 PF01471 Putative peptidoglycan binding domain BF38_4850 PF01510 N-acetylmuramoyl-L-alanine amidase BF38_4853 PF00664 ABC transporter transmembrane region BF38_4853 PF00005 ABC transporter BF38_4854 PF00664 ABC transporter transmembrane region BF38_4854 PF00005 ABC transporter BF38_4855 PF03672 Uncharacterised protein family (UPF0154) BF38_4856 PF10747 Sporulation inhibitor of replication protein SirA BF38_4857 PF02779 Transketolase, pyrimidine binding domain BF38_4857 PF02780 Transketolase, C-terminal domain BF38_4857 PF00456 Transketolase, thiamine diphosphate binding domain BF38_4858 PF01385 Probable transposase BF38_4858 PF12323 Helix-turn-helix domain BF38_4858 PF07282 Putative transposase DNA-binding domain BF38_4859 PF00528 Binding-protein-dependent transport system inner membrane component BF38_486 PF00899 ThiF family BF38_4860 PF00528 Binding-protein-dependent transport system inner membrane component BF38_4861 PF00005 ABC transporter BF38_4862 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF38_4863 PF00149 Calcineurin-like phosphoesterase BF38_4863 PF02872 5'-nucleotidase, C-terminal domain BF38_4864 PF05979 Bacterial protein of unknown function (DUF896) BF38_4865 PF00239 Resolvase, N terminal domain BF38_4866 PF00717 Peptidase S24-like BF38_4866 PF01726 LexA DNA binding domain BF38_4869 PF03551 Transcriptional regulator PadR-like family BF38_487 PF04055 Radical SAM superfamily BF38_487 PF06463 Molybdenum Cofactor Synthesis C BF38_4872 PF14431 YwqJ-like deaminase BF38_4872 PF14449 Pre-toxin TG BF38_4872 PF04740 LXG domain of WXG superfamily BF38_4875 PF03951 Glutamine synthetase, beta-Grasp domain BF38_4875 PF00120 Glutamine synthetase, catalytic domain BF38_4876 PF13411 MerR HTH family regulatory protein BF38_4877 PF06838 Methionine gamma-lyase BF38_4878 PF01926 50S ribosome-binding GTPase BF38_4878 PF13167 GTP-binding GTPase N-terminal BF38_4878 PF16360 GTP-binding GTPase Middle Region BF38_4879 PF03458 UPF0126 domain BF38_4881 PF00004 ATPase family associated with various cellular activities (AAA) BF38_4881 PF17866 AAA lid domain BF38_4884 PF17209 Hfq protein BF38_4887 PF06725 3D domain BF38_4887 PF01476 LysM domain BF38_4888 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF38_4888 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF38_4889 PF00294 pfkB family carbohydrate kinase BF38_4890 PF08220 DeoR-like helix-turn-helix domain BF38_4890 PF00455 DeoR C terminal sensor domain BF38_4891 PF00465 Iron-containing alcohol dehydrogenase BF38_4892 PF04238 Protein of unknown function (DUF420) BF38_4895 PF00324 Amino acid permease BF38_4896 PF00041 Fibronectin type III domain BF38_4896 PF00704 Glycosyl hydrolases family 18 BF38_4898 PF00149 Calcineurin-like phosphoesterase BF38_4898 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF38_4899 PF01226 Formate/nitrite transporter BF38_49 PF03979 Sigma-70 factor, region 1.1 BF38_49 PF00140 Sigma-70 factor, region 1.2 BF38_49 PF04539 Sigma-70 region 3 BF38_49 PF04545 Sigma-70, region 4 BF38_49 PF04542 Sigma-70 region 2 BF38_4900 PF00216 Bacterial DNA-binding protein BF38_4901 PF00403 Heavy-metal-associated domain BF38_4902 PF00403 Heavy-metal-associated domain BF38_4903 PF02583 Metal-sensitive transcriptional repressor BF38_4905 PF00756 Putative esterase BF38_4906 PF00005 ABC transporter BF38_4907 PF01032 FecCD transport family BF38_4908 PF01032 FecCD transport family BF38_4909 PF01497 Periplasmic binding protein BF38_491 PF00581 Rhodanese-like domain BF38_4910 PF03372 Endonuclease/Exonuclease/phosphatase family BF38_4911 PF02805 Metal binding domain of Ada BF38_4911 PF12833 Helix-turn-helix domain BF38_4912 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF38_4912 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF38_4913 PF00730 HhH-GPD superfamily base excision DNA repair protein BF38_4913 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BF38_4914 PF07687 Peptidase dimerisation domain BF38_4914 PF01546 Peptidase family M20/M25/M40 BF38_4918 PF00561 alpha/beta hydrolase fold BF38_4919 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_4920 PF03707 Bacterial signalling protein N terminal repeat BF38_4920 PF00563 EAL domain BF38_4920 PF00990 Diguanylate cyclase, GGDEF domain BF38_4922 PF10787 Uncharacterised protein from bacillus cereus group BF38_4923 PF04172 LrgB-like family BF38_4924 PF03788 LrgA family BF38_4925 PF00392 Bacterial regulatory proteins, gntR family BF38_4925 PF00155 Aminotransferase class I and II BF38_4928 PF02585 GlcNAc-PI de-N-acetylase BF38_493 PF00561 alpha/beta hydrolase fold BF38_4930 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BF38_4931 PF00082 Subtilase family BF38_4932 PF07486 Cell Wall Hydrolase BF38_4933 PF03275 UDP-galactopyranose mutase BF38_4934 PF00884 Sulfatase BF38_4935 PF00350 Dynamin family BF38_4937 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BF38_4938 PF01119 DNA mismatch repair protein, C-terminal domain BF38_4938 PF08676 MutL C terminal dimerisation domain BF38_4939 PF01624 MutS domain I BF38_4939 PF00488 MutS domain V BF38_4939 PF05188 MutS domain II BF38_4939 PF05190 MutS family domain IV BF38_4939 PF05192 MutS domain III BF38_494 PF03323 Bacillus/Clostridium GerA spore germination protein BF38_4940 PF10628 Outer spore coat protein E (CotE) BF38_4941 PF06133 Control of competence regulator ComK, YlbF/YmcA BF38_4942 PF00919 Uncharacterized protein family UPF0004 BF38_4942 PF01938 TRAM domain BF38_4942 PF04055 Radical SAM superfamily BF38_4943 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF38_4944 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BF38_4944 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BF38_4944 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BF38_4945 PF01244 Membrane dipeptidase (Peptidase family M19) BF38_4946 PF04232 Stage V sporulation protein S (SpoVS) BF38_4947 PF13277 YmdB-like protein BF38_4948 PF01966 HD domain BF38_4948 PF00013 KH domain BF38_4948 PF12072 Domain of unknown function (DUF3552) BF38_4949 PF00154 recA bacterial DNA recombination protein BF38_495 PF03845 Spore germination protein BF38_4950 PF00154 recA bacterial DNA recombination protein BF38_4951 PF00994 Probable molybdopterin binding domain BF38_4951 PF02464 Competence-damaged protein BF38_4951 PF18146 Damage-inducible protein CinA KH domain BF38_4952 PF01066 CDP-alcohol phosphatidyltransferase BF38_4953 PF13464 Domain of unknown function (DUF4115) BF38_4954 PF11868 Protein of unknown function (DUF3388) BF38_4955 PF11588 Protein of unknown function (DUF3243) BF38_4957 PF05193 Peptidase M16 inactive domain BF38_4957 PF00675 Insulinase (Peptidase family M16) BF38_4958 PF05193 Peptidase M16 inactive domain BF38_4963 PF07702 UTRA domain BF38_4963 PF00392 Bacterial regulatory proteins, gntR family BF38_4964 PF17854 FtsK alpha domain BF38_4964 PF09397 Ftsk gamma domain BF38_4964 PF01580 FtsK/SpoIIIE family BF38_4965 PF14035 YlzJ-like protein BF38_4966 PF00574 Clp protease BF38_4967 PF00753 Metallo-beta-lactamase superfamily BF38_4967 PF17770 Ribonuclease J C-terminal domain BF38_4967 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF38_4968 PF00701 Dihydrodipicolinate synthetase family BF38_4969 PF00696 Amino acid kinase family BF38_4969 PF13840 ACT domain BF38_4970 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF38_4970 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF38_4971 PF02441 Flavoprotein BF38_4972 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF38_4972 PF16924 Dipicolinate synthase subunit A N-terminal domain BF38_4973 PF05239 PRC-barrel domain BF38_4974 PF05193 Peptidase M16 inactive domain BF38_4974 PF00675 Insulinase (Peptidase family M16) BF38_4975 PF01522 Polysaccharide deacetylase BF38_4976 PF00575 S1 RNA binding domain BF38_4976 PF01138 3' exoribonuclease family, domain 1 BF38_4976 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BF38_4976 PF03725 3' exoribonuclease family, domain 2 BF38_4976 PF00013 KH domain BF38_4977 PF00312 Ribosomal protein S15 BF38_4978 PF06574 FAD synthetase BF38_4978 PF01687 Riboflavin kinase BF38_4979 PF16198 tRNA pseudouridylate synthase B C-terminal domain BF38_4979 PF01509 TruB family pseudouridylate synthase (N terminal domain) BF38_4980 PF02033 Ribosome-binding factor A BF38_4981 PF04456 Protein of unknown function (DUF503) BF38_4982 PF04760 Translation initiation factor IF-2, N-terminal region BF38_4982 PF00009 Elongation factor Tu GTP binding domain BF38_4982 PF11987 Translation-initiation factor 2 BF38_4983 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF38_4984 PF04296 Protein of unknown function (DUF448) BF38_4985 PF13184 NusA-like KH domain BF38_4985 PF08529 NusA N-terminal domain BF38_4985 PF00575 S1 RNA binding domain BF38_4986 PF02576 RimP N-terminal domain BF38_4986 PF17384 RimP C-terminal SH3 domain BF38_4987 PF14579 Helix-hairpin-helix motif BF38_4987 PF14480 DNA polymerase III polC-type N-terminus I BF38_4987 PF11490 DNA polymerase III polC-type N-terminus II BF38_4987 PF00929 Exonuclease BF38_4987 PF02811 PHP domain BF38_4987 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF38_4987 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF38_4988 PF04073 Aminoacyl-tRNA editing domain BF38_4988 PF03129 Anticodon binding domain BF38_4988 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF38_4989 PF02163 Peptidase family M50 BF38_4989 PF17820 PDZ domain BF38_4990 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF38_4990 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF38_4990 PF13288 DXP reductoisomerase C-terminal domain BF38_4992 PF01255 Putative undecaprenyl diphosphate synthase BF38_4993 PF01765 Ribosome recycling factor BF38_4994 PF00696 Amino acid kinase family BF38_4995 PF00889 Elongation factor TS BF38_4996 PF00318 Ribosomal protein S2 BF38_4997 PF08222 CodY helix-turn-helix domain BF38_4997 PF06018 CodY GAF-like domain BF38_4998 PF10431 C-terminal, D2-small domain, of ClpB protein BF38_4998 PF00004 ATPase family associated with various cellular activities (AAA) BF38_4998 PF07724 AAA domain (Cdc48 subfamily) BF38_4999 PF00227 Proteasome subunit BF38_50 PF10410 DnaB-helicase binding domain of primase BF38_50 PF08275 DNA primase catalytic core, N-terminal domain BF38_50 PF01807 CHC2 zinc finger BF38_500 PF09334 tRNA synthetases class I (M) BF38_500 PF13603 Leucyl-tRNA synthetase, Domain 2 BF38_500 PF08264 Anticodon-binding domain of tRNA BF38_500 PF00133 tRNA synthetases class I (I, L, M and V) BF38_5000 PF02899 Phage integrase, N-terminal SAM-like domain BF38_5000 PF00589 Phage integrase family BF38_5001 PF01134 Glucose inhibited division protein A BF38_5002 PF01131 DNA topoisomerase BF38_5002 PF01396 Topoisomerase DNA binding C4 zinc finger BF38_5002 PF01751 Toprim domain BF38_5003 PF02481 DNA recombination-mediator protein A BF38_5004 PF00549 CoA-ligase BF38_5004 PF02629 CoA binding domain BF38_5005 PF08442 ATP-grasp domain BF38_5005 PF00549 CoA-ligase BF38_5006 PF01351 Ribonuclease HII BF38_5007 PF01926 50S ribosome-binding GTPase BF38_5008 PF10502 Signal peptidase, peptidase S26 BF38_5009 PF01245 Ribosomal protein L19 BF38_501 PF07690 Major Facilitator Superfamily BF38_5010 PF01746 tRNA (Guanine-1)-methyltransferase BF38_5011 PF01782 RimM N-terminal domain BF38_5011 PF05239 PRC-barrel domain BF38_5013 PF00886 Ribosomal protein S16 BF38_5014 PF02978 Signal peptide binding domain BF38_5014 PF02881 SRP54-type protein, helical bundle domain BF38_5014 PF00448 SRP54-type protein, GTPase domain BF38_5015 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BF38_5016 PF00448 SRP54-type protein, GTPase domain BF38_5016 PF02881 SRP54-type protein, helical bundle domain BF38_5017 PF02463 RecF/RecN/SMC N terminal domain BF38_5017 PF06470 SMC proteins Flexible Hinge Domain BF38_5018 PF14622 Ribonuclease-III-like BF38_5018 PF00035 Double-stranded RNA binding motif BF38_5019 PF00550 Phosphopantetheine attachment site BF38_502 PF00999 Sodium/hydrogen exchanger family BF38_5021 PF00698 Acyl transferase domain BF38_5022 PF02504 Fatty acid synthesis protein BF38_5023 PF03061 Thioesterase superfamily BF38_5024 PF17191 RecG wedge domain BF38_5024 PF00270 DEAD/DEAH box helicase BF38_5024 PF00271 Helicase conserved C-terminal domain BF38_5025 PF13684 Dihydroxyacetone kinase family BF38_5025 PF02734 DAK2 domain BF38_5026 PF03780 Asp23 family, cell envelope-related function BF38_5027 PF00830 Ribosomal L28 family BF38_5028 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BF38_5028 PF04263 Thiamin pyrophosphokinase, catalytic domain BF38_5029 PF00834 Ribulose-phosphate 3 epimerase family BF38_503 PF02080 TrkA-C domain BF38_5030 PF03193 RsgA GTPase BF38_5030 PF16745 RsgA N-terminal domain BF38_5031 PF03793 PASTA domain BF38_5031 PF00069 Protein kinase domain BF38_5033 PF04055 Radical SAM superfamily BF38_5034 PF01029 NusB family BF38_5034 PF01189 16S rRNA methyltransferase RsmB/F BF38_5035 PF02911 Formyl transferase, C-terminal domain BF38_5035 PF00551 Formyl transferase BF38_5036 PF01327 Polypeptide deformylase BF38_5037 PF04851 Type III restriction enzyme, res subunit BF38_5037 PF18074 Primosomal protein N C-terminal domain BF38_5037 PF00271 Helicase conserved C-terminal domain BF38_5037 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BF38_5037 PF17764 3′ DNA-binding domain (3′BD) BF38_5038 PF04127 DNA / pantothenate metabolism flavoprotein BF38_5038 PF02441 Flavoprotein BF38_5039 PF01192 RNA polymerase Rpb6 BF38_504 PF00589 Phage integrase family BF38_5040 PF00625 Guanylate kinase BF38_5041 PF04025 Domain of unknown function (DUF370) BF38_5042 PF03755 YicC-like family, N-terminal region BF38_5042 PF08340 Domain of unknown function (DUF1732) BF38_5043 PF00690 Cation transporter/ATPase, N-terminus BF38_5043 PF00689 Cation transporting ATPase, C-terminus BF38_5045 PF00557 Metallopeptidase family M24 BF38_5045 PF01321 Creatinase/Prolidase N-terminal domain BF38_5052 PF00156 Phosphoribosyl transferase domain BF38_5053 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BF38_5054 PF01180 Dihydroorotate dehydrogenase BF38_5055 PF00175 Oxidoreductase NAD-binding domain BF38_5055 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BF38_5056 PF02142 MGS-like domain BF38_5056 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF38_5056 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF38_5057 PF00117 Glutamine amidotransferase class-I BF38_5057 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BF38_5058 PF01979 Amidohydrolase family BF38_5059 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF38_5059 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF38_506 PF00005 ABC transporter BF38_5060 PF00860 Permease family BF38_5061 PF00156 Phosphoribosyl transferase domain BF38_5062 PF00849 RNA pseudouridylate synthase BF38_5062 PF01479 S4 domain BF38_5063 PF01252 Signal peptidase (SPase) II BF38_5065 PF06827 Zinc finger found in FPG and IleRS BF38_5065 PF08264 Anticodon-binding domain of tRNA BF38_5065 PF00133 tRNA synthetases class I (I, L, M and V) BF38_5066 PF05103 DivIVA protein BF38_5067 PF01479 S4 domain BF38_5067 PF17774 Putative RNA-binding domain in YlmH BF38_5068 PF02325 YGGT family BF38_5069 PF04472 Cell division protein SepF BF38_507 PF07786 Protein of unknown function (DUF1624) BF38_507 PF04235 Protein of unknown function (DUF418) BF38_5070 PF01168 Alanine racemase, N-terminal domain BF38_5072 PF05239 PRC-barrel domain BF38_5073 PF04539 Sigma-70 region 3 BF38_5073 PF04542 Sigma-70 region 2 BF38_5073 PF04545 Sigma-70, region 4 BF38_5074 PF04545 Sigma-70, region 4 BF38_5074 PF04542 Sigma-70 region 2 BF38_5075 PF03419 Sporulation factor SpoIIGA BF38_5076 PF12327 FtsZ family, C-terminal domain BF38_5076 PF00091 Tubulin/FtsZ family, GTPase domain BF38_5077 PF02491 SHS2 domain inserted in FTSA BF38_5078 PF08478 POTRA domain, FtsQ-type BF38_5078 PF03799 Cell division protein FtsQ BF38_5079 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF38_5079 PF01565 FAD binding domain BF38_5080 PF04101 Glycosyltransferase family 28 C-terminal domain BF38_5080 PF03033 Glycosyltransferase family 28 N-terminal domain BF38_5081 PF01098 Cell cycle protein BF38_5082 PF08245 Mur ligase middle domain BF38_5082 PF02875 Mur ligase family, glutamate ligase domain BF38_5083 PF00953 Glycosyl transferase family 4 BF38_5083 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BF38_5084 PF08245 Mur ligase middle domain BF38_5084 PF02875 Mur ligase family, glutamate ligase domain BF38_5084 PF01225 Mur ligase family, catalytic domain BF38_5085 PF03793 PASTA domain BF38_5085 PF00905 Penicillin binding protein transpeptidase domain BF38_5085 PF03717 Penicillin-binding Protein dimerisation domain BF38_5087 PF04977 Septum formation initiator BF38_5088 PF01795 MraW methylase family BF38_5089 PF10079 Bacillithiol biosynthesis BshC BF38_509 PF10732 Protein of unknown function (DUF2524) BF38_5090 PF02558 Ketopantoate reductase PanE/ApbA BF38_5090 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF38_5091 PF00583 Acetyltransferase (GNAT) family BF38_5093 PF01783 Ribosomal L32p protein family BF38_5094 PF02620 Large ribosomal RNA subunit accumulation protein YceD BF38_5095 PF05636 HIGH Nucleotidyl Transferase BF38_5096 PF05362 Lon protease (S16) C-terminal proteolytic domain BF38_5096 PF13180 PDZ domain BF38_5097 PF01734 Patatin-like phospholipase BF38_5098 PF01467 Cytidylyltransferase-like BF38_5099 PF07670 Nucleoside recognition BF38_51 PF03618 Kinase/pyrophosphorylase BF38_510 PF16199 Radical_SAM C-terminal domain BF38_510 PF04055 Radical SAM superfamily BF38_5102 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BF38_5103 PF06133 Control of competence regulator ComK, YlbF/YmcA BF38_5104 PF00300 Histidine phosphatase superfamily (branch 1) BF38_5105 PF14003 YlbE-like protein BF38_5106 PF14071 Putative coat protein BF38_5107 PF00188 Cysteine-rich secretory protein family BF38_5107 PF14504 CAP-associated N-terminal BF38_5108 PF08868 YugN-like family BF38_5109 PF00795 Carbon-nitrogen hydrolase BF38_511 PF06962 Putative rRNA methylase BF38_5110 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BF38_5111 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BF38_5112 PF00510 Cytochrome c oxidase subunit III BF38_5113 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF38_5114 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BF38_5114 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF38_5114 PF00034 Cytochrome c BF38_5115 PF01040 UbiA prenyltransferase family BF38_5116 PF02628 Cytochrome oxidase assembly protein BF38_5117 PF02785 Biotin carboxylase C-terminal domain BF38_5117 PF00682 HMGL-like BF38_5117 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF38_5117 PF02436 Conserved carboxylase domain BF38_5117 PF00364 Biotin-requiring enzyme BF38_5117 PF00289 Biotin carboxylase, N-terminal domain BF38_5118 PF01098 Cell cycle protein BF38_5119 PF07408 Protein of unknown function (DUF1507) BF38_512 PF00005 ABC transporter BF38_512 PF13732 Domain of unknown function (DUF4162) BF38_5121 PF02562 PhoH-like protein BF38_5121 PF13638 PIN domain BF38_5123 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BF38_5125 PF14036 YlaH-like protein BF38_5128 PF00459 Inositol monophosphatase family BF38_5130 PF06335 Protein of unknown function (DUF1054) BF38_5131 PF05256 Uncharacterised protein family (UPF0223) BF38_5132 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF38_5132 PF01276 Orn/Lys/Arg decarboxylase, major domain BF38_514 PF01177 Asp/Glu/Hydantoin racemase BF38_5140 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_5140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF38_5141 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF38_5141 PF00364 Biotin-requiring enzyme BF38_5141 PF02817 e3 binding domain BF38_5142 PF02779 Transketolase, pyrimidine binding domain BF38_5142 PF02780 Transketolase, C-terminal domain BF38_5143 PF00676 Dehydrogenase E1 component BF38_5145 PF01327 Polypeptide deformylase BF38_5148 PF17770 Ribonuclease J C-terminal domain BF38_5148 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF38_5148 PF00753 Metallo-beta-lactamase superfamily BF38_5149 PF02254 TrkA-N domain BF38_5149 PF02080 TrkA-C domain BF38_5151 PF01546 Peptidase family M20/M25/M40 BF38_5151 PF07687 Peptidase dimerisation domain BF38_5152 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BF38_5152 PF00132 Bacterial transferase hexapeptide (six repeats) BF38_5152 PF14602 Hexapeptide repeat of succinyl-transferase BF38_5153 PF03466 LysR substrate binding domain BF38_5153 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_5156 PF04308 Ribonuclease H-like BF38_5158 PF08796 Protein of unknown function (DUF1797) BF38_5161 PF10388 EAL-domain associated signalling protein domain BF38_5161 PF00563 EAL domain BF38_5163 PF00149 Calcineurin-like phosphoesterase BF38_5163 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF38_5165 PF17941 Polyphosphate kinase C-terminal domain 1 BF38_5165 PF13090 Polyphosphate kinase C-terminal domain 2 BF38_5165 PF02503 Polyphosphate kinase middle domain BF38_5165 PF13089 Polyphosphate kinase N-terminal domain BF38_5166 PF02541 Ppx/GppA phosphatase family BF38_5167 PF14177 YkyB-like protein BF38_517 PF10776 Protein of unknown function (DUF2600) BF38_5172 PF07690 Major Facilitator Superfamily BF38_5174 PF01717 Cobalamin-independent synthase, Catalytic domain BF38_5174 PF08267 Cobalamin-independent synthase, N-terminal domain BF38_5176 PF14040 Deoxyribonuclease NucA/NucB BF38_5178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_5178 PF00512 His Kinase A (phospho-acceptor) domain BF38_518 PF12146 Serine aminopeptidase, S33 BF38_5180 PF00155 Aminotransferase class I and II BF38_5181 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF38_5181 PF00356 Bacterial regulatory proteins, lacI family BF38_5182 PF00528 Binding-protein-dependent transport system inner membrane component BF38_5183 PF00528 Binding-protein-dependent transport system inner membrane component BF38_5184 PF13416 Bacterial extracellular solute-binding protein BF38_5185 PF02903 Alpha amylase, N-terminal ig-like domain BF38_5185 PF00128 Alpha amylase, catalytic domain BF38_5185 PF16657 Maltogenic Amylase, C-terminal domain BF38_5186 PF00128 Alpha amylase, catalytic domain BF38_5186 PF16657 Maltogenic Amylase, C-terminal domain BF38_5187 PF03459 TOBE domain BF38_5187 PF17912 MalK OB fold domain BF38_5187 PF00005 ABC transporter BF38_519 PF00132 Bacterial transferase hexapeptide (six repeats) BF38_5195 PF00108 Thiolase, N-terminal domain BF38_5195 PF02803 Thiolase, C-terminal domain BF38_5196 PF00293 NUDIX domain BF38_52 PF08279 HTH domain BF38_52 PF00571 CBS domain BF38_520 PF01569 PAP2 superfamily BF38_5202 PF03551 Transcriptional regulator PadR-like family BF38_5206 PF01636 Phosphotransferase enzyme family BF38_5207 PF00795 Carbon-nitrogen hydrolase BF38_5208 PF00155 Aminotransferase class I and II BF38_5209 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BF38_5209 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BF38_521 PF13439 Glycosyltransferase Family 4 BF38_521 PF00534 Glycosyl transferases group 1 BF38_5211 PF00596 Class II Aldolase and Adducin N-terminal domain BF38_5212 PF03079 ARD/ARD' family BF38_5215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF38_5215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF38_5216 PF00990 Diguanylate cyclase, GGDEF domain BF38_5217 PF00881 Nitroreductase family BF38_522 PF12804 MobA-like NTP transferase domain BF38_5220 PF05524 PEP-utilising enzyme, N-terminal BF38_5220 PF02896 PEP-utilising enzyme, TIM barrel domain BF38_5220 PF00391 PEP-utilising enzyme, mobile domain BF38_5221 PF00381 PTS HPr component phosphorylation site BF38_5222 PF02378 Phosphotransferase system, EIIC BF38_5222 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF38_5222 PF00367 phosphotransferase system, EIIB BF38_5223 PF00874 PRD domain BF38_5223 PF03123 CAT RNA binding domain BF38_5226 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BF38_5227 PF01979 Amidohydrolase family BF38_5229 PF04079 Segregation and condensation complex subunit ScpB BF38_523 PF00994 Probable molybdopterin binding domain BF38_5230 PF02616 Segregation and condensation protein ScpA BF38_5232 PF03745 Domain of unknown function (DUF309) BF38_5233 PF00583 Acetyltransferase (GNAT) family BF38_5234 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BF38_5235 PF06207 Protein of unknown function (DUF1002) BF38_5237 PF03323 Bacillus/Clostridium GerA spore germination protein BF38_5238 PF14097 Stage V sporulation protein AE1 BF38_5239 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF38_5240 PF07451 Stage V sporulation protein AD (SpoVAD) BF38_5241 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF38_5242 PF13782 Stage V sporulation protein AB BF38_5243 PF12164 Stage V sporulation protein AA BF38_5245 PF00209 Sodium:neurotransmitter symporter family BF38_5246 PF04545 Sigma-70, region 4 BF38_5246 PF04539 Sigma-70 region 3 BF38_5246 PF04542 Sigma-70 region 2 BF38_5247 PF13581 Histidine kinase-like ATPase domain BF38_5248 PF01740 STAS domain BF38_5249 PF00768 D-alanyl-D-alanine carboxypeptidase BF38_5249 PF07943 Penicillin-binding protein 5, C-terminal domain BF38_5250 PF00392 Bacterial regulatory proteins, gntR family BF38_5251 PF00005 ABC transporter BF38_5255 PF01047 MarR family BF38_5257 PF00860 Permease family BF38_5258 PF01544 CorA-like Mg2+ transporter protein BF38_5259 PF02885 Glycosyl transferase family, helical bundle domain BF38_5259 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF38_5259 PF00591 Glycosyl transferase family, a/b domain BF38_526 PF02773 S-adenosylmethionine synthetase, C-terminal domain BF38_526 PF02772 S-adenosylmethionine synthetase, central domain BF38_526 PF00438 S-adenosylmethionine synthetase, N-terminal domain BF38_5260 PF01048 Phosphorylase superfamily BF38_5261 PF01676 Metalloenzyme superfamily BF38_5263 PF02899 Phage integrase, N-terminal SAM-like domain BF38_5263 PF00589 Phage integrase family BF38_5264 PF14004 Protein of unknown function (DUF4227) BF38_5265 PF01475 Ferric uptake regulator family BF38_5266 PF01944 Stage II sporulation protein M BF38_5268 PF00293 NUDIX domain BF38_5269 PF13072 Mother cell inhibitor of FtsZ BF38_527 PF01293 Phosphoenolpyruvate carboxykinase BF38_5270 PF00248 Aldo/keto reductase family BF38_5271 PF00248 Aldo/keto reductase family BF38_5272 PF04229 GrpB protein BF38_5272 PF13673 Acetyltransferase (GNAT) domain BF38_5274 PF02872 5'-nucleotidase, C-terminal domain BF38_5274 PF00746 LPXTG cell wall anchor motif BF38_5274 PF00149 Calcineurin-like phosphoesterase BF38_5274 PF00565 Staphylococcal nuclease homologue BF38_5276 PF12146 Serine aminopeptidase, S33 BF38_5277 PF03553 Na+/H+ antiporter family BF38_5277 PF13726 Na+-H+ antiporter family BF38_5278 PF00356 Bacterial regulatory proteins, lacI family BF38_5279 PF00583 Acetyltransferase (GNAT) family BF38_5280 PF12146 Serine aminopeptidase, S33 BF38_5281 PF10827 Protein of unknown function (DUF2552) BF38_5283 PF01872 RibD C-terminal domain BF38_5283 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF38_5284 PF00677 Lumazine binding domain BF38_5285 PF00925 GTP cyclohydrolase II BF38_5285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BF38_5286 PF00885 6,7-dimethyl-8-ribityllumazine synthase BF38_5288 PF06968 Biotin and Thiamin Synthesis associated domain BF38_5288 PF04055 Radical SAM superfamily BF38_5289 PF13847 Methyltransferase domain BF38_5290 PF12697 Alpha/beta hydrolase family BF38_5290 PF08241 Methyltransferase domain BF38_5291 PF00155 Aminotransferase class I and II BF38_5293 PF00202 Aminotransferase class-III BF38_5296 PF00149 Calcineurin-like phosphoesterase BF38_5296 PF02872 5'-nucleotidase, C-terminal domain BF38_5298 PF01037 Lrp/AsnC ligand binding domain BF38_5298 PF13404 AsnC-type helix-turn-helix domain BF38_53 PF02565 Recombination protein O C terminal BF38_53 PF11967 Recombination protein O N terminal BF38_5301 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF38_5301 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF38_5302 PF00202 Aminotransferase class-III BF38_5303 PF00696 Amino acid kinase family BF38_5304 PF01960 ArgJ family BF38_5305 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF38_5305 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF38_5307 PF00106 short chain dehydrogenase BF38_5308 PF00753 Metallo-beta-lactamase superfamily BF38_5309 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF38_5309 PF03807 NADP oxidoreductase coenzyme F420-dependent BF38_5310 PF03313 Serine dehydratase alpha chain BF38_5311 PF03315 Serine dehydratase beta chain BF38_5311 PF01842 ACT domain BF38_5312 PF00753 Metallo-beta-lactamase superfamily BF38_5312 PF12706 Beta-lactamase superfamily domain BF38_5314 PF00817 impB/mucB/samB family BF38_5314 PF11799 impB/mucB/samB family C-terminal domain BF38_5314 PF11798 IMS family HHH motif BF38_5316 PF07687 Peptidase dimerisation domain BF38_5316 PF01546 Peptidase family M20/M25/M40 BF38_5317 PF13302 Acetyltransferase (GNAT) domain BF38_5319 PF03734 L,D-transpeptidase catalytic domain BF38_5320 PF11728 Putative aromatic acid exporter C-terminal domain BF38_5320 PF06081 Aromatic acid exporter family member 1 BF38_5321 PF00005 ABC transporter BF38_5322 PF00528 Binding-protein-dependent transport system inner membrane component BF38_5323 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF38_5324 PF06491 Disulphide isomerase BF38_5325 PF11208 Protein of unknown function (DUF2992) BF38_5326 PF09297 NADH pyrophosphatase zinc ribbon domain BF38_5326 PF00293 NUDIX domain BF38_5327 PF01098 Cell cycle protein BF38_5328 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF38_5328 PF00364 Biotin-requiring enzyme BF38_5328 PF02817 e3 binding domain BF38_5329 PF02779 Transketolase, pyrimidine binding domain BF38_5329 PF02780 Transketolase, C-terminal domain BF38_5330 PF00676 Dehydrogenase E1 component BF38_5331 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF38_5331 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_5332 PF00871 Acetokinase family BF38_5333 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF38_5333 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF38_5334 PF01515 Phosphate acetyl/butaryl transferase BF38_5335 PF02954 Bacterial regulatory protein, Fis family BF38_5335 PF00158 Sigma-54 interaction domain BF38_5335 PF00989 PAS fold BF38_5337 PF03009 Glycerophosphoryl diester phosphodiesterase family BF38_5338 PF14174 YycC-like protein BF38_534 PF01784 NIF3 (NGG1p interacting factor 3) BF38_5340 PF00072 Response regulator receiver domain BF38_5340 PF08769 Sporulation initiation factor Spo0A C terminal BF38_5341 PF17820 PDZ domain BF38_5341 PF05580 SpoIVB peptidase S55 BF38_5342 PF13476 AAA domain BF38_5343 PF01316 Arginine repressor, DNA binding domain BF38_5343 PF02863 Arginine repressor, C-terminal domain BF38_5344 PF01728 FtsJ-like methyltransferase BF38_5344 PF01479 S4 domain BF38_5345 PF02779 Transketolase, pyrimidine binding domain BF38_5345 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BF38_5345 PF02780 Transketolase, C-terminal domain BF38_5346 PF00348 Polyprenyl synthetase BF38_5347 PF02609 Exonuclease VII small subunit BF38_5348 PF02601 Exonuclease VII, large subunit BF38_5348 PF13742 OB-fold nucleic acid binding domain BF38_5349 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BF38_5349 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BF38_535 PF13188 PAS domain BF38_535 PF13426 PAS domain BF38_535 PF00512 His Kinase A (phospho-acceptor) domain BF38_535 PF00989 PAS fold BF38_535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_5350 PF01029 NusB family BF38_5351 PF03780 Asp23 family, cell envelope-related function BF38_5352 PF02785 Biotin carboxylase C-terminal domain BF38_5352 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF38_5352 PF00289 Biotin carboxylase, N-terminal domain BF38_5353 PF00364 Biotin-requiring enzyme BF38_5355 PF12685 SpoIIIAH-like protein BF38_5357 PF09581 Stage III sporulation protein AF (Spore_III_AF) BF38_5358 PF09546 Stage III sporulation protein AE (spore_III_AE) BF38_5359 PF06686 Stage III sporulation protein AC/AD protein family BF38_536 PF00989 PAS fold BF38_536 PF00512 His Kinase A (phospho-acceptor) domain BF38_536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_536 PF08447 PAS fold BF38_5360 PF06686 Stage III sporulation protein AC/AD protein family BF38_5361 PF09548 Stage III sporulation protein AB (spore_III_AB) BF38_5366 PF09285 Elongation factor P, C-terminal BF38_5366 PF01132 Elongation factor P (EF-P) OB domain BF38_5366 PF08207 Elongation factor P (EF-P) KOW-like domain BF38_5367 PF01321 Creatinase/Prolidase N-terminal domain BF38_5367 PF00557 Metallopeptidase family M24 BF38_5368 PF01220 Dehydroquinase class II BF38_5369 PF11085 Conserved membrane protein YqhR BF38_537 PF00561 alpha/beta hydrolase fold BF38_537 PF08386 TAP-like protein BF38_5370 PF07136 Protein of unknown function (DUF1385) BF38_5371 PF13419 Haloacid dehalogenase-like hydrolase BF38_5373 PF01325 Iron dependent repressor, N-terminal DNA binding domain BF38_5373 PF02742 Iron dependent repressor, metal binding and dimerisation domain BF38_5376 PF03099 Biotin/lipoate A/B protein ligase family BF38_5377 PF00581 Rhodanese-like domain BF38_5378 PF00356 Bacterial regulatory proteins, lacI family BF38_5378 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF38_538 PF00884 Sulfatase BF38_5380 PF00893 Small Multidrug Resistance protein BF38_5381 PF00893 Small Multidrug Resistance protein BF38_5388 PF00005 ABC transporter BF38_5389 PF00392 Bacterial regulatory proteins, gntR family BF38_5392 PF02347 Glycine cleavage system P-protein BF38_5393 PF02347 Glycine cleavage system P-protein BF38_5394 PF08669 Glycine cleavage T-protein C-terminal barrel domain BF38_5394 PF01571 Aminomethyltransferase folate-binding domain BF38_5395 PF00271 Helicase conserved C-terminal domain BF38_5395 PF00176 SNF2 family N-terminal domain BF38_5396 PF11079 Bacterial protein YqhG of unknown function BF38_5400 PF14038 YqzE-like protein BF38_5401 PF01202 Shikimate kinase BF38_5406 PF07963 Prokaryotic N-terminal methylation motif BF38_5408 PF00482 Type II secretion system (T2SS), protein F BF38_5415 PF00877 NlpC/P60 family BF38_542 PF00005 ABC transporter BF38_5421 PF00106 short chain dehydrogenase BF38_543 PF00528 Binding-protein-dependent transport system inner membrane component BF38_5446 PF00293 NUDIX domain BF38_5447 PF07728 AAA domain (dynein-related subfamily) BF38_5447 PF12102 Domain of unknown function (DUF3578) BF38_5449 PF04002 RadC-like JAB domain BF38_5454 PF00069 Protein kinase domain BF38_5454 PF13847 Methyltransferase domain BF38_546 PF13419 Haloacid dehalogenase-like hydrolase BF38_5464 PF00092 von Willebrand factor type A domain BF38_5468 PF03323 Bacillus/Clostridium GerA spore germination protein BF38_5469 PF13610 DDE domain BF38_5470 PF03009 Glycerophosphoryl diester phosphodiesterase family BF38_548 PF00293 NUDIX domain BF38_5480 PF01385 Probable transposase BF38_5480 PF12323 Helix-turn-helix domain BF38_5480 PF07282 Putative transposase DNA-binding domain BF38_5481 PF01381 Helix-turn-helix BF38_5482 PF17763 Glutaminase/Asparaginase C-terminal domain BF38_5482 PF00710 Asparaginase, N-terminal BF38_5483 PF00854 POT family BF38_5484 PF13276 HTH-like domain BF38_5484 PF00665 Integrase core domain BF38_5484 PF13333 Integrase core domain BF38_5492 PF13181 Tetratricopeptide repeat BF38_5492 PF00535 Glycosyl transferase family 2 BF38_5495 PF00535 Glycosyl transferase family 2 BF38_5498 PF00005 ABC transporter BF38_55 PF01926 50S ribosome-binding GTPase BF38_55 PF07650 KH domain BF38_5500 PF03551 Transcriptional regulator PadR-like family BF38_5510 PF00535 Glycosyl transferase family 2 BF38_5516 PF17209 Hfq protein BF38_5517 PF01022 Bacterial regulatory protein, arsR family BF38_552 PF02664 S-Ribosylhomocysteinase (LuxS) BF38_5523 PF13411 MerR HTH family regulatory protein BF38_5523 PF13152 Protein of unknown function (DUF3967) BF38_5524 PF01609 Transposase DDE domain BF38_553 PF00484 Carbonic anhydrase BF38_5539 PF13302 Acetyltransferase (GNAT) domain BF38_554 PF01809 Putative membrane protein insertion efficiency factor BF38_555 PF01654 Cytochrome bd terminal oxidase subunit I BF38_5555 PF00589 Phage integrase family BF38_5555 PF13495 Phage integrase, N-terminal SAM-like domain BF38_5559 PF01769 Divalent cation transporter BF38_5559 PF03448 MgtE intracellular N domain BF38_5559 PF00571 CBS domain BF38_556 PF02322 Cytochrome bd terminal oxidase subunit II BF38_5563 PF01609 Transposase DDE domain BF38_5565 PF01381 Helix-turn-helix BF38_557 PF10676 Spore germination protein gerPA/gerPF BF38_5570 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF38_5573 PF01609 Transposase DDE domain BF38_5575 PF01022 Bacterial regulatory protein, arsR family BF38_5582 PF00975 Thioesterase domain BF38_5583 PF01648 4'-phosphopantetheinyl transferase superfamily BF38_5584 PF00550 Phosphopantetheine attachment site BF38_5584 PF13193 AMP-binding enzyme C-terminal domain BF38_5584 PF00501 AMP-binding enzyme BF38_5584 PF00668 Condensation domain BF38_5585 PF07993 Male sterility protein BF38_5585 PF00550 Phosphopantetheine attachment site BF38_5585 PF00501 AMP-binding enzyme BF38_5585 PF00668 Condensation domain BF38_5585 PF13193 AMP-binding enzyme C-terminal domain BF38_5586 PF13193 AMP-binding enzyme C-terminal domain BF38_5586 PF00668 Condensation domain BF38_5586 PF00550 Phosphopantetheine attachment site BF38_5586 PF00501 AMP-binding enzyme BF38_5587 PF07690 Major Facilitator Superfamily BF38_5588 PF03466 LysR substrate binding domain BF38_5588 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_5589 PF00892 EamA-like transporter family BF38_5591 PF08808 RES domain BF38_5597 PF13193 AMP-binding enzyme C-terminal domain BF38_5597 PF00501 AMP-binding enzyme BF38_5598 PF00793 DAHP synthetase I family BF38_5598 PF01817 Chorismate mutase type II BF38_5599 PF01817 Chorismate mutase type II BF38_5599 PF00793 DAHP synthetase I family BF38_56 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF38_560 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_560 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_5601 PF03772 Competence protein BF38_5601 PF13567 Domain of unknown function (DUF4131) BF38_5601 PF00753 Metallo-beta-lactamase superfamily BF38_5602 PF01648 4'-phosphopantetheinyl transferase superfamily BF38_5603 PF00975 Thioesterase domain BF38_5604 PF17760 UvrA interaction domain BF38_5604 PF17755 UvrA DNA-binding domain BF38_5606 PF00550 Phosphopantetheine attachment site BF38_5606 PF07993 Male sterility protein BF38_5606 PF00668 Condensation domain BF38_5606 PF13193 AMP-binding enzyme C-terminal domain BF38_5606 PF00501 AMP-binding enzyme BF38_5607 PF00501 AMP-binding enzyme BF38_5607 PF13193 AMP-binding enzyme C-terminal domain BF38_5607 PF08659 KR domain BF38_5607 PF00550 Phosphopantetheine attachment site BF38_5607 PF00109 Beta-ketoacyl synthase, N-terminal domain BF38_5607 PF02801 Beta-ketoacyl synthase, C-terminal domain BF38_5607 PF00550 Phosphopantetheine attachment site BF38_5607 PF00109 Beta-ketoacyl synthase, N-terminal domain BF38_5607 PF16197 Ketoacyl-synthetase C-terminal extension BF38_5607 PF08659 KR domain BF38_5607 PF16197 Ketoacyl-synthetase C-terminal extension BF38_5607 PF00668 Condensation domain BF38_5607 PF13193 AMP-binding enzyme C-terminal domain BF38_5607 PF14765 Polyketide synthase dehydratase BF38_5607 PF00501 AMP-binding enzyme BF38_5607 PF14765 Polyketide synthase dehydratase BF38_5607 PF00668 Condensation domain BF38_5607 PF02801 Beta-ketoacyl synthase, C-terminal domain BF38_5608 PF14765 Polyketide synthase dehydratase BF38_5608 PF08242 Methyltransferase domain BF38_5608 PF00550 Phosphopantetheine attachment site BF38_5608 PF08659 KR domain BF38_5608 PF02801 Beta-ketoacyl synthase, C-terminal domain BF38_5608 PF16197 Ketoacyl-synthetase C-terminal extension BF38_5608 PF00109 Beta-ketoacyl synthase, N-terminal domain BF38_5609 PF14765 Polyketide synthase dehydratase BF38_5609 PF08242 Methyltransferase domain BF38_5609 PF08659 KR domain BF38_5609 PF00550 Phosphopantetheine attachment site BF38_5609 PF00109 Beta-ketoacyl synthase, N-terminal domain BF38_5609 PF16197 Ketoacyl-synthetase C-terminal extension BF38_5609 PF02801 Beta-ketoacyl synthase, C-terminal domain BF38_5610 PF00550 Phosphopantetheine attachment site BF38_5610 PF08659 KR domain BF38_5610 PF00109 Beta-ketoacyl synthase, N-terminal domain BF38_5610 PF14765 Polyketide synthase dehydratase BF38_5610 PF02801 Beta-ketoacyl synthase, C-terminal domain BF38_5610 PF16197 Ketoacyl-synthetase C-terminal extension BF38_5611 PF02801 Beta-ketoacyl synthase, C-terminal domain BF38_5611 PF14765 Polyketide synthase dehydratase BF38_5611 PF00550 Phosphopantetheine attachment site BF38_5611 PF08659 KR domain BF38_5611 PF16197 Ketoacyl-synthetase C-terminal extension BF38_5611 PF00109 Beta-ketoacyl synthase, N-terminal domain BF38_5612 PF00107 Zinc-binding dehydrogenase BF38_5612 PF08240 Alcohol dehydrogenase GroES-like domain BF38_5613 PF00202 Aminotransferase class-III BF38_5614 PF01596 O-methyltransferase BF38_5615 PF03060 Nitronate monooxygenase BF38_5615 PF00698 Acyl transferase domain BF38_5616 PF00753 Metallo-beta-lactamase superfamily BF38_5617 PF00467 KOW motif BF38_5617 PF02357 Transcription termination factor nusG BF38_5619 PF06445 GyrI-like small molecule binding domain BF38_5619 PF13411 MerR HTH family regulatory protein BF38_5625 PF00665 Integrase core domain BF38_5625 PF13333 Integrase core domain BF38_5625 PF13276 HTH-like domain BF38_5630 PF10502 Signal peptidase, peptidase S26 BF38_5633 PF04539 Sigma-70 region 3 BF38_5633 PF00140 Sigma-70 factor, region 1.2 BF38_5633 PF04545 Sigma-70, region 4 BF38_5633 PF03979 Sigma-70 factor, region 1.1 BF38_5633 PF04542 Sigma-70 region 2 BF38_5643 PF12323 Helix-turn-helix domain BF38_5643 PF07282 Putative transposase DNA-binding domain BF38_5643 PF01385 Probable transposase BF38_565 PF04012 PspA/IM30 family BF38_5660 PF01966 HD domain BF38_5664 PF00498 FHA domain BF38_5677 PF10263 SprT-like family BF38_5677 PF17283 SprT-like zinc ribbon domain BF38_5682 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF38_5682 PF00476 DNA polymerase family A BF38_5682 PF01612 3'-5' exonuclease BF38_5682 PF01367 5'-3' exonuclease, C-terminal SAM fold BF38_569 PF07664 Ferrous iron transport protein B C terminus BF38_569 PF07670 Nucleoside recognition BF38_569 PF02421 Ferrous iron transport protein B BF38_569 PF17910 FeoB cytosolic helical domain BF38_57 PF01219 Prokaryotic diacylglycerol kinase BF38_5707 PF01476 LysM domain BF38_5707 PF01471 Putative peptidoglycan binding domain BF38_5707 PF01510 N-acetylmuramoyl-L-alanine amidase BF38_5708 PF01471 Putative peptidoglycan binding domain BF38_5708 PF01476 LysM domain BF38_5708 PF01510 N-acetylmuramoyl-L-alanine amidase BF38_571 PF09515 Thiamine transporter protein (Thia_YuaJ) BF38_5718 PF02661 Fic/DOC family BF38_572 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_572 PF00512 His Kinase A (phospho-acceptor) domain BF38_572 PF00672 HAMP domain BF38_573 PF00072 Response regulator receiver domain BF38_573 PF00486 Transcriptional regulatory protein, C terminal BF38_5734 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain BF38_5734 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BF38_5734 PF17890 Peptidoglycan hydrolase LytB WW-like domain BF38_5734 PF01473 Putative cell wall binding repeat BF38_5745 PF01555 DNA methylase BF38_5766 PF02557 D-alanyl-D-alanine carboxypeptidase BF38_579 PF00781 Diacylglycerol kinase catalytic domain BF38_58 PF02130 Uncharacterized protein family UPF0054 BF38_5810 PF08275 DNA primase catalytic core, N-terminal domain BF38_5810 PF01807 CHC2 zinc finger BF38_5824 PF03989 DNA gyrase C-terminal domain, beta-propeller BF38_5824 PF00521 DNA gyrase/topoisomerase IV, subunit A BF38_5825 PF00204 DNA gyrase B BF38_5825 PF01751 Toprim domain BF38_5825 PF00986 DNA gyrase B subunit, carboxyl terminus BF38_5825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_584 PF09335 SNARE associated Golgi protein BF38_585 PF00398 Ribosomal RNA adenine dimethylase BF38_586 PF02687 FtsX-like permease family BF38_587 PF00005 ABC transporter BF38_588 PF06445 GyrI-like small molecule binding domain BF38_588 PF12833 Helix-turn-helix domain BF38_589 PF00486 Transcriptional regulatory protein, C terminal BF38_589 PF00072 Response regulator receiver domain BF38_59 PF01966 HD domain BF38_59 PF07698 7TM receptor with intracellular HD hydrolase BF38_59 PF07697 7TM-HD extracellular BF38_590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_5908 PF13529 Peptidase_C39 like family BF38_591 PF02687 FtsX-like permease family BF38_592 PF02687 FtsX-like permease family BF38_593 PF00005 ABC transporter BF38_5934 PF04203 Sortase domain BF38_5939 PF00476 DNA polymerase family A BF38_5939 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF38_5939 PF01367 5'-3' exonuclease, C-terminal SAM fold BF38_594 PF02687 FtsX-like permease family BF38_596 PF02447 GntP family permease BF38_599 PF07071 KDGP aldolase BF38_5996 PF00580 UvrD/REP helicase N-terminal domain BF38_5996 PF13361 UvrD-like helicase C-terminal domain BF38_60 PF02562 PhoH-like protein BF38_600 PF03841 L-seryl-tRNA selenium transferase BF38_601 PF01979 Amidohydrolase family BF38_604 PF02557 D-alanyl-D-alanine carboxypeptidase BF38_605 PF00512 His Kinase A (phospho-acceptor) domain BF38_605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_606 PF00486 Transcriptional regulatory protein, C terminal BF38_606 PF00072 Response regulator receiver domain BF38_607 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF38_607 PF13378 Enolase C-terminal domain-like BF38_608 PF00501 AMP-binding enzyme BF38_608 PF13193 AMP-binding enzyme C-terminal domain BF38_609 PF00378 Enoyl-CoA hydratase/isomerase BF38_61 PF06898 Putative stage IV sporulation protein YqfD BF38_610 PF00561 alpha/beta hydrolase fold BF38_6102 PF00069 Protein kinase domain BF38_6102 PF03793 PASTA domain BF38_6104 PF14550 Putative phage serine protease XkdF BF38_6105 PF04233 Phage Mu protein F like protein BF38_6106 PF04860 Phage portal protein BF38_6108 PF10668 Phage terminase small subunit BF38_611 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF38_611 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF38_611 PF16582 Middle domain of thiamine pyrophosphate BF38_6110 PF00239 Resolvase, N terminal domain BF38_6110 PF02796 Helix-turn-helix domain of resolvase BF38_6115 PF03838 Recombination protein U BF38_612 PF00425 chorismate binding enzyme BF38_6128 PF01695 IstB-like ATP binding protein BF38_613 PF01040 UbiA prenyltransferase family BF38_614 PF01258 Prokaryotic dksA/traR C4-type zinc finger BF38_6140 PF01381 Helix-turn-helix BF38_615 PF00313 'Cold-shock' DNA-binding domain BF38_6154 PF03412 Peptidase C39 family BF38_6154 PF00664 ABC transporter transmembrane region BF38_6154 PF00005 ABC transporter BF38_6161 PF00005 ABC transporter BF38_6167 PF00664 ABC transporter transmembrane region BF38_6167 PF03412 Peptidase C39 family BF38_6167 PF00005 ABC transporter BF38_6170 PF00854 POT family BF38_6173 PF05225 helix-turn-helix, Psq domain BF38_6173 PF02810 SEC-C motif BF38_6177 PF13614 AAA domain BF38_6181 PF03992 Antibiotic biosynthesis monooxygenase BF38_6183 PF13411 MerR HTH family regulatory protein BF38_6183 PF13152 Protein of unknown function (DUF3967) BF38_6186 PF11799 impB/mucB/samB family C-terminal domain BF38_6186 PF11798 IMS family HHH motif BF38_6186 PF00817 impB/mucB/samB family BF38_6188 PF14431 YwqJ-like deaminase BF38_6188 PF14449 Pre-toxin TG BF38_6188 PF04740 LXG domain of WXG superfamily BF38_619 PF00343 Carbohydrate phosphorylase BF38_6190 PF12123 N-acetylmuramoyl-l-alanine amidase BF38_6190 PF01510 N-acetylmuramoyl-L-alanine amidase BF38_6191 PF05105 Bacteriophage holin family BF38_62 PF07873 YabP family BF38_620 PF00534 Glycosyl transferases group 1 BF38_620 PF08323 Starch synthase catalytic domain BF38_6202 PF04883 Bacteriophage HK97-gp10, putative tail-component BF38_6206 PF05065 Phage capsid family BF38_6207 PF13614 AAA domain BF38_621 PF00483 Nucleotidyl transferase BF38_6212 PF01022 Bacterial regulatory protein, arsR family BF38_6214 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF38_6217 PF18284 DNA methylase N-terminal domain BF38_6217 PF00145 C-5 cytosine-specific DNA methylase BF38_6218 PF00145 C-5 cytosine-specific DNA methylase BF38_622 PF00483 Nucleotidyl transferase BF38_6220 PF13411 MerR HTH family regulatory protein BF38_6220 PF13152 Protein of unknown function (DUF3967) BF38_6222 PF17443 Uncharacterized protein pXO2-72 BF38_6223 PF11798 IMS family HHH motif BF38_6223 PF11799 impB/mucB/samB family C-terminal domain BF38_6223 PF00817 impB/mucB/samB family BF38_6227 PF02796 Helix-turn-helix domain of resolvase BF38_6227 PF00239 Resolvase, N terminal domain BF38_6228 PF00589 Phage integrase family BF38_6228 PF02899 Phage integrase, N-terminal SAM-like domain BF38_623 PF00128 Alpha amylase, catalytic domain BF38_623 PF02806 Alpha amylase, C-terminal all-beta domain BF38_623 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF38_6237 PF01751 Toprim domain BF38_6237 PF01131 DNA topoisomerase BF38_6238 PF13958 Toxin ToxN, type III toxin-antitoxin system BF38_6239 PF13154 Protein of unknown function (DUF3991) BF38_6242 PF18840 Large polyvalent protein associated domain 25 BF38_6243 PF17630 Family of unknown function (DUF5511) BF38_6244 PF17633 Family of unknown function (DUF5514) BF38_625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF38_625 PF00056 lactate/malate dehydrogenase, NAD binding domain BF38_6250 PF17632 Family of unknown function (DUF5513) BF38_6253 PF00877 NlpC/P60 family BF38_6260 PF12696 TraM recognition site of TraD and TraG BF38_6262 PF04956 TrbC/VIRB2 family BF38_6267 PF00437 Type II/IV secretion system protein BF38_627 PF04542 Sigma-70 region 2 BF38_627 PF08281 Sigma-70, region 4 BF38_6286 PF17362 Family of unknown function BF38_6290 PF08708 Primase C terminal 1 (PriCT-1) BF38_63 PF09424 Yqey-like protein BF38_64 PF01165 Ribosomal protein S21 BF38_646 PF05697 Bacterial trigger factor protein (TF) BF38_646 PF05698 Bacterial trigger factor protein (TF) C-terminus BF38_65 PF01938 TRAM domain BF38_65 PF04055 Radical SAM superfamily BF38_65 PF00919 Uncharacterized protein family UPF0004 BF38_654 PF02308 MgtC family BF38_655 PF08868 YugN-like family BF38_656 PF07885 Ion channel BF38_656 PF02254 TrkA-N domain BF38_657 PF00342 Phosphoglucose isomerase BF38_658 PF04070 Domain of unknown function (DUF378) BF38_659 PF00575 S1 RNA binding domain BF38_66 PF04452 RNA methyltransferase BF38_660 PF00155 Aminotransferase class I and II BF38_661 PF01037 Lrp/AsnC ligand binding domain BF38_662 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF38_662 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF38_663 PF08386 TAP-like protein BF38_663 PF00561 alpha/beta hydrolase fold BF38_665 PF00155 Aminotransferase class I and II BF38_668 PF08810 Kinase associated protein B BF38_669 PF00929 Exonuclease BF38_670 PF03600 Citrate transporter BF38_673 PF03129 Anticodon binding domain BF38_673 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF38_674 PF03061 Thioesterase superfamily BF38_676 PF02632 BioY family BF38_678 PF00483 Nucleotidyl transferase BF38_679 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF38_679 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF38_679 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF38_679 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF38_68 PF00226 DnaJ domain BF38_68 PF01556 DnaJ C terminal domain BF38_68 PF00684 DnaJ central domain BF38_680 PF10372 Bacterial membrane-spanning protein N-terminus BF38_680 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF38_681 PF00883 Cytosol aminopeptidase family, catalytic domain BF38_681 PF02789 Cytosol aminopeptidase family, N-terminal domain BF38_682 PF06725 3D domain BF38_684 PF13344 Haloacid dehalogenase-like hydrolase BF38_684 PF00293 NUDIX domain BF38_685 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_686 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_688 PF06445 GyrI-like small molecule binding domain BF38_69 PF00012 Hsp70 protein BF38_691 PF04463 Protein of unknown function (DUF523) BF38_695 PF01521 Iron-sulphur cluster biosynthesis BF38_696 PF01678 Diaminopimelate epimerase BF38_697 PF07293 Protein of unknown function (DUF1450) BF38_698 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_70 PF01025 GrpE BF38_701 PF03649 Uncharacterised protein family (UPF0014) BF38_702 PF03831 PhnA domain BF38_702 PF08274 PhnA Zinc-Ribbon BF38_706 PF07315 Protein of unknown function (DUF1462) BF38_707 PF01106 NifU-like domain BF38_71 PF01628 HrcA protein C terminal domain BF38_710 PF04608 Phosphatidylglycerophosphatase A BF38_712 PF02525 Flavodoxin-like fold BF38_714 PF13344 Haloacid dehalogenase-like hydrolase BF38_716 PF01934 Protein of unknown function DUF86 BF38_717 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF38_72 PF06969 HemN C-terminal domain BF38_72 PF04055 Radical SAM superfamily BF38_720 PF06265 Protein of unknown function (DUF1027) BF38_721 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF38_722 PF07739 TipAS antibiotic-recognition domain BF38_722 PF13411 MerR HTH family regulatory protein BF38_723 PF10086 YhfC intramembrane metalloprotease BF38_727 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BF38_727 PF04055 Radical SAM superfamily BF38_728 PF01551 Peptidase family M23 BF38_73 PF01638 HxlR-like helix-turn-helix BF38_730 PF08827 Domain of unknown function (DUF1805) BF38_731 PF02872 5'-nucleotidase, C-terminal domain BF38_732 PF01458 Uncharacterized protein family (UPF0051) BF38_733 PF01592 NifU-like N terminal domain BF38_734 PF00266 Aminotransferase class-V BF38_735 PF01458 Uncharacterized protein family (UPF0051) BF38_736 PF00005 ABC transporter BF38_737 PF03180 NLPA lipoprotein BF38_738 PF03180 NLPA lipoprotein BF38_739 PF00528 Binding-protein-dependent transport system inner membrane component BF38_74 PF03144 Elongation factor Tu domain 2 BF38_74 PF00009 Elongation factor Tu GTP binding domain BF38_74 PF06421 GTP-binding protein LepA C-terminus BF38_74 PF00679 Elongation factor G C-terminus BF38_740 PF00005 ABC transporter BF38_740 PF09383 NIL domain BF38_742 PF00085 Thioredoxin BF38_743 PF01751 Toprim domain BF38_744 PF01597 Glycine cleavage H-protein BF38_745 PF03960 ArsC family BF38_756 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF38_756 PF00056 lactate/malate dehydrogenase, NAD binding domain BF38_76 PF03418 Germination protease BF38_762 PF08671 Anti-repressor SinI BF38_762 PF01381 Helix-turn-helix BF38_763 PF13305 Tetracyclin repressor-like, C-terminal domain BF38_763 PF00440 Bacterial regulatory proteins, tetR family BF38_764 PF00753 Metallo-beta-lactamase superfamily BF38_765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF38_765 PF02770 Acyl-CoA dehydrogenase, middle domain BF38_765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF38_766 PF02803 Thiolase, C-terminal domain BF38_766 PF00108 Thiolase, N-terminal domain BF38_767 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF38_767 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF38_767 PF00378 Enoyl-CoA hydratase/isomerase BF38_768 PF14115 YuzL-like protein BF38_769 PF00768 D-alanyl-D-alanine carboxypeptidase BF38_769 PF07943 Penicillin-binding protein 5, C-terminal domain BF38_77 PF01649 Ribosomal protein S20 BF38_770 PF01619 Proline dehydrogenase BF38_771 PF10835 Protein of unknown function (DUF2573) BF38_772 PF01910 Thiamine-binding protein BF38_773 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_773 PF02743 Cache domain BF38_773 PF00672 HAMP domain BF38_777 PF07690 Major Facilitator Superfamily BF38_778 PF13520 Amino acid permease BF38_78 PF06144 DNA polymerase III, delta subunit BF38_780 PF02096 60Kd inner membrane protein BF38_782 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF38_782 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF38_79 PF06144 DNA polymerase III, delta subunit BF38_790 PF09335 SNARE associated Golgi protein BF38_792 PF17969 L,D-transpeptidase C-terminal domain BF38_792 PF03734 L,D-transpeptidase catalytic domain BF38_793 PF00072 Response regulator receiver domain BF38_793 PF00486 Transcriptional regulatory protein, C terminal BF38_794 PF00512 His Kinase A (phospho-acceptor) domain BF38_794 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_794 PF00989 PAS fold BF38_794 PF16736 Single Cache-like BF38_796 PF09334 tRNA synthetases class I (M) BF38_796 PF08264 Anticodon-binding domain of tRNA BF38_798 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_798 PF00672 HAMP domain BF38_798 PF02743 Cache domain BF38_799 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_799 PF02743 Cache domain BF38_799 PF00672 HAMP domain BF38_80 PF14141 YqzM-like protein BF38_800 PF01883 Iron-sulfur cluster assembly protein BF38_801 PF03413 Peptidase propeptide and YPEB domain BF38_801 PF07504 Fungalysin/Thermolysin Propeptide Motif BF38_801 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF38_801 PF01447 Thermolysin metallopeptidase, catalytic domain BF38_802 PF02678 Pirin BF38_802 PF17954 Quercetinase C-terminal cupin domain BF38_803 PF01047 MarR family BF38_805 PF00999 Sodium/hydrogen exchanger family BF38_806 PF02080 TrkA-C domain BF38_807 PF01235 Sodium:alanine symporter family BF38_808 PF00210 Ferritin-like domain BF38_81 PF00753 Metallo-beta-lactamase superfamily BF38_81 PF13567 Domain of unknown function (DUF4131) BF38_81 PF03772 Competence protein BF38_811 PF03641 Possible lysine decarboxylase BF38_813 PF00210 Ferritin-like domain BF38_815 PF07662 Na+ dependent nucleoside transporter C-terminus BF38_815 PF01773 Na+ dependent nucleoside transporter N-terminus BF38_816 PF01773 Na+ dependent nucleoside transporter N-terminus BF38_816 PF07662 Na+ dependent nucleoside transporter C-terminus BF38_817 PF01235 Sodium:alanine symporter family BF38_818 PF13460 NAD(P)H-binding BF38_82 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF38_822 PF00248 Aldo/keto reductase family BF38_823 PF07690 Major Facilitator Superfamily BF38_824 PF01638 HxlR-like helix-turn-helix BF38_825 PF07849 Protein of unknown function (DUF1641) BF38_826 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_827 PF01479 S4 domain BF38_827 PF00579 tRNA synthetases class I (W and Y) BF38_828 PF01565 FAD binding domain BF38_828 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF38_83 PF10531 SLBB domain BF38_832 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF38_832 PF00672 HAMP domain BF38_832 PF17202 Single cache domain 3 BF38_834 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF38_835 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF38_838 PF13302 Acetyltransferase (GNAT) domain BF38_839 PF06146 Phosphate-starvation-inducible E BF38_84 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF38_84 PF03807 NADP oxidoreductase coenzyme F420-dependent BF38_842 PF00005 ABC transporter BF38_843 PF01032 FecCD transport family BF38_844 PF01032 FecCD transport family BF38_846 PF00072 Response regulator receiver domain BF38_846 PF00486 Transcriptional regulatory protein, C terminal BF38_85 PF13649 Methyltransferase domain BF38_850 PF00665 Integrase core domain BF38_850 PF09299 Mu transposase, C-terminal BF38_853 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BF38_853 PF18766 SWI2/SNF2 ATPase BF38_853 PF12008 Type I restriction and modification enzyme - subunit R C terminal BF38_855 PF02384 N-6 DNA Methylase BF38_855 PF12161 HsdM N-terminal domain BF38_856 PF01668 SmpB protein BF38_857 PF08206 Ribonuclease B OB domain BF38_857 PF00773 RNB domain BF38_857 PF00575 S1 RNA binding domain BF38_857 PF17876 Cold shock domain BF38_858 PF12146 Serine aminopeptidase, S33 BF38_859 PF03840 Preprotein translocase SecG subunit BF38_860 PF04172 LrgB-like family BF38_861 PF03788 LrgA family BF38_862 PF01156 Inosine-uridine preferring nucleoside hydrolase BF38_863 PF00113 Enolase, C-terminal TIM barrel domain BF38_863 PF03952 Enolase, N-terminal domain BF38_864 PF01676 Metalloenzyme superfamily BF38_864 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BF38_865 PF00121 Triosephosphate isomerase BF38_866 PF00162 Phosphoglycerate kinase BF38_867 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF38_867 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF38_868 PF04198 Putative sugar-binding domain BF38_87 PF01966 HD domain BF38_870 PF00309 Sigma-54 factor, Activator interacting domain (AID) BF38_870 PF04963 Sigma-54 factor, core binding domain BF38_870 PF04552 Sigma-54, DNA binding domain BF38_874 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF38_875 PF07451 Stage V sporulation protein AD (SpoVAD) BF38_876 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF38_878 PF04239 Protein of unknown function (DUF421) BF38_879 PF00574 Clp protease BF38_88 PF01467 Cytidylyltransferase-like BF38_880 PF00381 PTS HPr component phosphorylation site BF38_881 PF14527 WhiA LAGLIDADG-like domain BF38_881 PF02650 WhiA C-terminal HTH domain BF38_881 PF10298 WhiA N-terminal LAGLIDADG-like domain BF38_882 PF01933 Uncharacterised protein family UPF0052 BF38_883 PF03668 P-loop ATPase protein family BF38_884 PF00293 NUDIX domain BF38_886 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF38_888 PF14602 Hexapeptide repeat of succinyl-transferase BF38_889 PF13419 Haloacid dehalogenase-like hydrolase BF38_89 PF01985 CRS1 / YhbY (CRM) domain BF38_890 PF01790 Prolipoprotein diacylglyceryl transferase BF38_891 PF07475 HPr Serine kinase C-terminal domain BF38_891 PF02603 HPr Serine kinase N terminus BF38_892 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BF38_894 PF17755 UvrA DNA-binding domain BF38_894 PF17760 UvrA interaction domain BF38_894 PF00005 ABC transporter BF38_895 PF17757 UvrB interaction domain BF38_895 PF12344 Ultra-violet resistance protein B BF38_895 PF02151 UvrB/uvrC motif BF38_895 PF04851 Type III restriction enzyme, res subunit BF38_895 PF00271 Helicase conserved C-terminal domain BF38_898 PF07739 TipAS antibiotic-recognition domain BF38_898 PF13411 MerR HTH family regulatory protein BF38_90 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BF38_90 PF01488 Shikimate / quinate 5-dehydrogenase BF38_90 PF08501 Shikimate dehydrogenase substrate binding domain BF38_903 PF03601 Conserved hypothetical protein 698 BF38_904 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_904 PF03466 LysR substrate binding domain BF38_905 PF00376 MerR family regulatory protein BF38_905 PF09278 MerR, DNA binding BF38_906 PF03358 NADPH-dependent FMN reductase BF38_908 PF01906 Putative heavy-metal-binding BF38_909 PF00664 ABC transporter transmembrane region BF38_909 PF00005 ABC transporter BF38_91 PF01926 50S ribosome-binding GTPase BF38_910 PF17820 PDZ domain BF38_911 PF03572 Peptidase family S41 BF38_911 PF01471 Putative peptidoglycan binding domain BF38_911 PF17820 PDZ domain BF38_912 PF18075 FtsX extracellular domain BF38_912 PF02687 FtsX-like permease family BF38_913 PF00005 ABC transporter BF38_914 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF38_915 PF00472 RF-1 domain BF38_915 PF03462 PCRF domain BF38_916 PF07516 SecA Wing and Scaffold domain BF38_916 PF02810 SEC-C motif BF38_916 PF01043 SecA preprotein cross-linking domain BF38_916 PF07517 SecA DEAD-like domain BF38_917 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BF38_917 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BF38_918 PF00313 'Cold-shock' DNA-binding domain BF38_920 PF04851 Type III restriction enzyme, res subunit BF38_920 PF00271 Helicase conserved C-terminal domain BF38_921 PF01476 LysM domain BF38_921 PF00877 NlpC/P60 family BF38_922 PF01638 HxlR-like helix-turn-helix BF38_923 PF02645 Uncharacterised protein, DegV family COG1307 BF38_924 PF01205 Uncharacterized protein family UPF0029 BF38_924 PF09186 Domain of unknown function (DUF1949) BF38_925 PF03816 Cell envelope-related transcriptional attenuator domain BF38_926 PF02350 UDP-N-acetylglucosamine 2-epimerase BF38_927 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF38_927 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF38_927 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF38_928 PF00953 Glycosyl transferase family 4 BF38_930 PF00874 PRD domain BF38_930 PF03610 PTS system fructose IIA component BF38_930 PF00158 Sigma-54 interaction domain BF38_932 PF02417 Chromate transporter BF38_933 PF04794 YdjC-like protein BF38_934 PF02056 Family 4 glycosyl hydrolase BF38_934 PF11975 Family 4 glycosyl hydrolase C-terminal domain BF38_935 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF38_936 PF02378 Phosphotransferase system, EIIC BF38_937 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF38_939 PF02675 S-adenosylmethionine decarboxylase BF38_94 PF02666 Phosphatidylserine decarboxylase BF38_940 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF38_941 PF02378 Phosphotransferase system, EIIC BF38_942 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF38_943 PF00375 Sodium:dicarboxylate symporter family BF38_945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF38_947 PF03466 LysR substrate binding domain BF38_947 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF38_95 PF04542 Sigma-70 region 2 BF38_95 PF04545 Sigma-70, region 4 BF38_950 PF01654 Cytochrome bd terminal oxidase subunit I BF38_951 PF02322 Cytochrome bd terminal oxidase subunit II BF38_952 PF02040 Arsenical pump membrane protein BF38_953 PF13667 ThiC-associated domain BF38_953 PF01964 Radical SAM ThiC family BF38_954 PF02652 L-lactate permease BF38_956 PF09988 Uncharacterized metal-binding protein (DUF2227) BF38_958 PF00884 Sulfatase BF38_959 PF01063 Amino-transferase class IV BF38_960 PF00877 NlpC/P60 family BF38_960 PF01476 LysM domain BF38_961 PF07662 Na+ dependent nucleoside transporter C-terminus BF38_961 PF01773 Na+ dependent nucleoside transporter N-terminus BF38_965 PF02028 BCCT, betaine/carnitine/choline family transporter BF38_966 PF06725 3D domain BF38_966 PF01476 LysM domain BF38_97 PF16244 Domain of unknown function (DUF4901) BF38_971 PF04434 SWIM zinc finger BF38_972 PF12419 SNF2 Helicase protein BF38_972 PF00271 Helicase conserved C-terminal domain BF38_972 PF00176 SNF2 family N-terminal domain BF38_978 PF04542 Sigma-70 region 2 BF38_978 PF04545 Sigma-70, region 4 BF38_979 PF04893 Yip1 domain BF38_98 PF00471 Ribosomal protein L33 BF38_980 PF04893 Yip1 domain BF38_981 PF12704 MacB-like periplasmic core domain BF38_981 PF02687 FtsX-like permease family BF38_982 PF00005 ABC transporter BF38_986 PF07690 Major Facilitator Superfamily BF38_989 PF16736 Single Cache-like BF38_989 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF38_989 PF00512 His Kinase A (phospho-acceptor) domain BF38_989 PF00989 PAS fold BF38_99 PF00881 Nitroreductase family BF38_990 PF00072 Response regulator receiver domain BF38_990 PF00486 Transcriptional regulatory protein, C terminal BF38_991 PF16363 GDP-mannose 4,6 dehydratase BF38_994 PF16363 GDP-mannose 4,6 dehydratase BF38_995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF38_995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF38_995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF38_996 PF00535 Glycosyl transferase family 2