A3L20_00005	SM00382	ATPases associated with a variety of cellular activities
A3L20_00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
A3L20_00010	SM00480	DNA polymerase III beta subunit
A3L20_00025	SM00387	Histidine kinase-like ATPases
A3L20_00025	SM00433	TopoisomeraseII
A3L20_00030	SM00434	DNA Topoisomerase IV
A3L20_00065	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L20_00065	SM01240	A3L20_00065
A3L20_00070	SM00936	Penicillin-binding protein 5, C-terminal domain 
A3L20_00125	SM00382	ATPases associated with a variety of cellular activities
A3L20_00135	SM00493	A3L20_00135
A3L20_00210	SM00465	GIY-YIG type nucleases (URI domain)
A3L20_00220	SM00966	SpoVT / AbrB like domain 
A3L20_00235	SM00493	A3L20_00235
A3L20_00240	SM00650	Ribosomal RNA adenine dimethylases
A3L20_00285	SM01400	A3L20_00285
A3L20_00300	SM00487	DEAD-like helicases superfamily
A3L20_00300	SM00490	helicase superfamily c-terminal domain
A3L20_00300	SM00982	A3L20_00300
A3L20_00300	SM01058	CarD-like/TRCF domain
A3L20_00305	SM00966	SpoVT / AbrB like domain 
A3L20_00320	SM00363	S4 RNA-binding domain
A3L20_00340	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L20_00355	SM00331	Sigma factor PP2C-like phosphatases
A3L20_00355	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A3L20_00360	SM00977	TilS substrate C-terminal domain
A3L20_00370	SM00382	ATPases associated with a variety of cellular activities
A3L20_00410	SM00905	Dihydroneopterin aldolase
A3L20_00420	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_00525	SM00382	ATPases associated with a variety of cellular activities
A3L20_00525	SM01086	C-terminal, D2-small domain, of ClpB protein
A3L20_00530	SM00382	ATPases associated with a variety of cellular activities
A3L20_00540	SM00670	Large family of predicted nucleotide-binding domains
A3L20_00565	SM00840	A3L20_00565
A3L20_00570	SM00535	Ribonuclease III family
A3L20_00575	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A3L20_00585	SM00421	helix_turn_helix, Lux Regulon
A3L20_00595	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A3L20_00600	SM00649	Ribosomal protein L11/L12
A3L20_00630	SM00663	RNA polymerase I subunit A N-terminus
A3L20_00650	SM00838	Elongation factor G C-terminus
A3L20_00650	SM00889	Elongation factor G, domain IV
A3L20_00660	SM01403	A3L20_00660
A3L20_00680	SM01382	A3L20_00680
A3L20_00680	SM01383	A3L20_00680
A3L20_00695	SM00322	K homology RNA-binding domain
A3L20_00715	SM01374	A3L20_00715
A3L20_00720	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A3L20_00780	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L20_00800	SM00662	RNA polymerases D
A3L20_00810	SM00382	ATPases associated with a variety of cellular activities
A3L20_00815	SM00382	ATPases associated with a variety of cellular activities
A3L20_00845	SM00646	A3L20_00845
A3L20_00860	SM01251	A3L20_00860
A3L20_00995	SM00382	ATPases associated with a variety of cellular activities
A3L20_00995	SM00930	A3L20_00995
A3L20_01005	SM00829	Enoylreductase
A3L20_01060	SM00382	ATPases associated with a variety of cellular activities
A3L20_01065	SM00382	ATPases associated with a variety of cellular activities
A3L20_01140	SM00563	Phosphate acyltransferases
A3L20_01145	SM00354	helix_turn _helix lactose operon repressor
A3L20_01205	SM00382	ATPases associated with a variety of cellular activities
A3L20_01230	SM00382	ATPases associated with a variety of cellular activities
A3L20_01235	SM00382	ATPases associated with a variety of cellular activities
A3L20_01300	SM00487	DEAD-like helicases superfamily
A3L20_01300	SM00490	helicase superfamily c-terminal domain
A3L20_01325	SM01005	Alanine racemase, C-terminal domain
A3L20_01340	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L20_01340	SM00732	Likely ribonuclease with RNase H fold.
A3L20_01345	SM00731	SprT homologues.
A3L20_01455	SM00382	ATPases associated with a variety of cellular activities
A3L20_01460	SM00881	CoA binding domain
A3L20_01475	SM00883	Chaperonin 10 Kd subunit
A3L20_01495	SM00448	cheY-homologous receiver domain
A3L20_01495	SM00862	Transcriptional regulatory protein, C terminal
A3L20_01500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_01500	SM00387	Histidine kinase-like ATPases
A3L20_01500	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_01595	SM01001	AIR carboxylase
A3L20_01605	SM00998	Adenylosuccinate lyase C-terminus
A3L20_01620	SM01211	A3L20_01620
A3L20_01645	SM00798	AICARFT/IMPCHase bienzyme
A3L20_01645	SM00851	MGS-like domain
A3L20_01650	SM01209	A3L20_01650
A3L20_01650	SM01210	A3L20_01650
A3L20_01660	SM00244	prohibitin homologues
A3L20_01680	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A3L20_01680	SM00292	breast cancer carboxy-terminal domain
A3L20_01680	SM00532	Ligase N family
A3L20_01705	SM00382	ATPases associated with a variety of cellular activities
A3L20_01705	SM00930	A3L20_01705
A3L20_01730	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_01750	SM00845	GatB domain
A3L20_01755	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A3L20_01770	SM00382	ATPases associated with a variety of cellular activities
A3L20_01825	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_01835	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_01840	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_01865	SM00966	SpoVT / AbrB like domain 
A3L20_01910	SM00507	HNH nucleases
A3L20_01970	SM00507	HNH nucleases
A3L20_02095	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A3L20_02140	SM01007	Class II Aldolase and Adducin N-terminal domain
A3L20_02195	SM00387	Histidine kinase-like ATPases
A3L20_02195	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_02250	SM00062	Bacterial periplasmic substrate-binding proteins
A3L20_02250	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A3L20_02255	SM00382	ATPases associated with a variety of cellular activities
A3L20_02260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_02260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_02295	SM00419	helix_turn_helix, cAMP Regulatory protein
A3L20_02310	SM00642	Alpha-amylase domain
A3L20_02330	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A3L20_02330	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A3L20_02330	SM00493	A3L20_02330
A3L20_02355	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_02355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_02380	SM00382	ATPases associated with a variety of cellular activities
A3L20_02385	SM00060	Fibronectin type 3 domain
A3L20_02385	SM00636	A3L20_02385
A3L20_02385	SM00637	A3L20_02385
A3L20_02420	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_02440	SM00946	Prolyl-tRNA synthetase, C-terminal
A3L20_02485	SM00831	Cation transporter/ATPase, N-terminus
A3L20_02495	SM00226	Low molecular weight phosphatase family
A3L20_02590	SM00478	endonuclease III
A3L20_02615	SM00382	ATPases associated with a variety of cellular activities
A3L20_02635	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_02680	SM00984	UDP binding domain
A3L20_02760	SM00478	endonuclease III
A3L20_02760	SM00525	A3L20_02760
A3L20_02785	SM00382	ATPases associated with a variety of cellular activities
A3L20_02805	SM00382	ATPases associated with a variety of cellular activities
A3L20_02975	SM00567	E-Z type HEAT repeats
A3L20_02990	SM00052	Putative diguanylate phosphodiesterase
A3L20_02990	SM00091	PAS domain
A3L20_02990	SM00267	diguanylate cyclase
A3L20_02995	SM00763	PrkA AAA domain
A3L20_03005	SM00365	Leucine-rich repeat, SDS22-like subfamily
A3L20_03005	SM00369	Leucine-rich repeats, typical (most populated) subfamily
A3L20_03005	SM00725	NEAr Transporter domain
A3L20_03015	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
A3L20_03025	SM00244	prohibitin homologues
A3L20_03030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_03030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_03035	SM00387	Histidine kinase-like ATPases
A3L20_03040	SM00448	cheY-homologous receiver domain
A3L20_03060	SM00248	ankyrin repeats
A3L20_03075	SM00382	ATPases associated with a variety of cellular activities
A3L20_03100	SM00448	cheY-homologous receiver domain
A3L20_03100	SM00862	Transcriptional regulatory protein, C terminal
A3L20_03105	SM00387	Histidine kinase-like ATPases
A3L20_03105	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_03120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_03120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_03125	SM00387	Histidine kinase-like ATPases
A3L20_03130	SM00448	cheY-homologous receiver domain
A3L20_03140	SM00919	Malic enzyme, NAD binding domain
A3L20_03140	SM01274	A3L20_03140
A3L20_03155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_03165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_03165	SM00387	Histidine kinase-like ATPases
A3L20_03165	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_03170	SM00448	cheY-homologous receiver domain
A3L20_03170	SM00862	Transcriptional regulatory protein, C terminal
A3L20_03195	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A3L20_03195	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A3L20_03210	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A3L20_03210	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A3L20_03220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_03235	SM00028	Tetratricopeptide repeats
A3L20_03235	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_03285	SM01091	Transporter associated domain
A3L20_03300	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_03330	SM00382	ATPases associated with a variety of cellular activities
A3L20_03355	SM00327	von Willebrand factor (vWF) type A domain
A3L20_03360	SM00382	ATPases associated with a variety of cellular activities
A3L20_03365	SM00155	Phospholipase D. Active site motifs.
A3L20_03385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_03385	SM00866	A3L20_03385
A3L20_03395	SM00642	Alpha-amylase domain
A3L20_03430	SM00382	ATPases associated with a variety of cellular activities
A3L20_03435	SM00062	Bacterial periplasmic substrate-binding proteins
A3L20_03435	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A3L20_03485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_03485	SM00387	Histidine kinase-like ATPases
A3L20_03485	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_03490	SM00448	cheY-homologous receiver domain
A3L20_03490	SM00862	Transcriptional regulatory protein, C terminal
A3L20_03520	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_03530	SM00354	helix_turn _helix lactose operon repressor
A3L20_03545	SM00382	ATPases associated with a variety of cellular activities
A3L20_03585	SM00829	Enoylreductase
A3L20_03595	SM00770	Zinc dependent phospholipase C (alpha toxin)
A3L20_03635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_03645	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_03695	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_03790	SM00899	A3L20_03790
A3L20_03935	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L20_03950	SM00287	Bacterial SH3 domain homologues
A3L20_03960	SM00382	ATPases associated with a variety of cellular activities
A3L20_04050	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_04075	SM00382	ATPases associated with a variety of cellular activities
A3L20_04110	SM00640	Glycosyl hydrolases family 32
A3L20_04120	SM00354	helix_turn _helix lactose operon repressor
A3L20_04200	SM00849	Metallo-beta-lactamase superfamily
A3L20_04210	SM00450	Rhodanese Homology Domain
A3L20_04215	SM00450	Rhodanese Homology Domain
A3L20_04240	SM00829	Enoylreductase
A3L20_04295	SM00287	Bacterial SH3 domain homologues
A3L20_04305	SM00382	ATPases associated with a variety of cellular activities
A3L20_04365	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
A3L20_04460	SM00344	helix_turn_helix ASNC type
A3L20_04495	SM00014	Acid phosphatase homologues
A3L20_04510	SM00382	ATPases associated with a variety of cellular activities
A3L20_04535	SM00448	cheY-homologous receiver domain
A3L20_04535	SM00862	Transcriptional regulatory protein, C terminal
A3L20_04540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_04540	SM00387	Histidine kinase-like ATPases
A3L20_04540	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_04550	SM00382	ATPases associated with a variety of cellular activities
A3L20_04560	SM00382	ATPases associated with a variety of cellular activities
A3L20_04570	SM00849	Metallo-beta-lactamase superfamily
A3L20_04620	SM00382	ATPases associated with a variety of cellular activities
A3L20_04625	SM00382	ATPases associated with a variety of cellular activities
A3L20_04630	SM00062	Bacterial periplasmic substrate-binding proteins
A3L20_04630	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A3L20_04640	SM00382	ATPases associated with a variety of cellular activities
A3L20_04715	SM00644	A3L20_04715
A3L20_04720	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_04755	SM00047	Lysozyme subfamily 2
A3L20_04790	SM00646	A3L20_04790
A3L20_04830	SM00382	ATPases associated with a variety of cellular activities
A3L20_04835	SM00382	ATPases associated with a variety of cellular activities
A3L20_04860	SM00849	Metallo-beta-lactamase superfamily
A3L20_04880	SM00823	Phosphopantetheine attachment site
A3L20_04890	SM00998	Adenylosuccinate lyase C-terminus
A3L20_04970	SM00860	SMI1 / KNR4 family
A3L20_04975	SM00860	SMI1 / KNR4 family
A3L20_05030	SM00860	SMI1 / KNR4 family
A3L20_05075	SM00091	PAS domain
A3L20_05075	SM00387	Histidine kinase-like ATPases
A3L20_05080	SM00448	cheY-homologous receiver domain
A3L20_05095	SM00487	DEAD-like helicases superfamily
A3L20_05095	SM00490	helicase superfamily c-terminal domain
A3L20_05150	SM00894	Excalibur calcium-binding domain
A3L20_05235	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_05290	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_05300	SM00460	Transglutaminase/protease-like homologues
A3L20_05380	SM00331	Sigma factor PP2C-like phosphatases
A3L20_05380	SM00448	cheY-homologous receiver domain
A3L20_05385	SM00138	Methyltransferase, chemotaxis proteins 
A3L20_05390	SM00387	Histidine kinase-like ATPases
A3L20_05390	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_05390	SM00448	cheY-homologous receiver domain
A3L20_05425	SM00507	HNH nucleases
A3L20_05430	SM00829	Enoylreductase
A3L20_05465	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L20_05490	SM00028	Tetratricopeptide repeats
A3L20_05525	SM00835	Cupin
A3L20_05530	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_05620	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_05635	SM00382	ATPases associated with a variety of cellular activities
A3L20_05790	SM00354	helix_turn _helix lactose operon repressor
A3L20_05800	SM00849	Metallo-beta-lactamase superfamily
A3L20_05850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L20_05870	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_05870	SM00871	Bacterial transcription activator, effector binding domain
A3L20_05880	SM00387	Histidine kinase-like ATPases
A3L20_05880	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_05885	SM00448	cheY-homologous receiver domain
A3L20_05885	SM00862	Transcriptional regulatory protein, C terminal
A3L20_05910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_05910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_05960	SM00357	Cold shock protein domain
A3L20_06070	SM00857	Resolvase, N terminal domain
A3L20_06075	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_06080	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_06085	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_06225	SM00507	HNH nucleases
A3L20_06315	SM00644	A3L20_06315
A3L20_06350	SM01060	A3L20_06350
A3L20_06360	SM00642	Alpha-amylase domain
A3L20_06380	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L20_06415	SM00382	ATPases associated with a variety of cellular activities
A3L20_06415	SM01086	C-terminal, D2-small domain, of ClpB protein
A3L20_06445	SM00825	Beta-ketoacyl synthase
A3L20_06490	SM00382	ATPases associated with a variety of cellular activities
A3L20_06495	SM00382	ATPases associated with a variety of cellular activities
A3L20_06530	SM00155	Phospholipase D. Active site motifs.
A3L20_06555	SM01118	A3L20_06555
A3L20_06565	SM00954	Region found in RelA / SpoT proteins
A3L20_06720	SM00635	Bacterial Ig-like domain 2
A3L20_06795	SM01324	A3L20_06795
A3L20_06840	SM00861	Transketolase, pyrimidine binding domain
A3L20_06845	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_06880	SM00382	ATPases associated with a variety of cellular activities
A3L20_06940	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_06960	SM00382	ATPases associated with a variety of cellular activities
A3L20_06980	SM00014	Acid phosphatase homologues
A3L20_07035	SM00448	cheY-homologous receiver domain
A3L20_07035	SM00862	Transcriptional regulatory protein, C terminal
A3L20_07040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_07040	SM00387	Histidine kinase-like ATPases
A3L20_07040	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_07045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_07045	SM00895	A3L20_07045
A3L20_07115	SM00822	A3L20_07115
A3L20_07150	SM00382	ATPases associated with a variety of cellular activities
A3L20_07175	SM00420	helix_turn_helix, Deoxyribose operon repressor
A3L20_07175	SM01134	A3L20_07175
A3L20_07185	SM00365	Leucine-rich repeat, SDS22-like subfamily
A3L20_07185	SM00369	Leucine-rich repeats, typical (most populated) subfamily
A3L20_07185	SM00725	NEAr Transporter domain
A3L20_07190	SM01007	Class II Aldolase and Adducin N-terminal domain
A3L20_07210	SM00387	Histidine kinase-like ATPases
A3L20_07210	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_07215	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_07235	SM00387	Histidine kinase-like ATPases
A3L20_07235	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_07310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_07315	SM00382	ATPases associated with a variety of cellular activities
A3L20_07325	SM00382	ATPases associated with a variety of cellular activities
A3L20_07345	SM00344	helix_turn_helix ASNC type
A3L20_07465	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_07530	SM00917	LeuA allosteric (dimerisation) domain
A3L20_07535	SM01329	A3L20_07535
A3L20_07720	SM00387	Histidine kinase-like ATPases
A3L20_07725	SM00421	helix_turn_helix, Lux Regulon
A3L20_07725	SM00448	cheY-homologous receiver domain
A3L20_07815	SM00091	PAS domain
A3L20_07815	SM00387	Histidine kinase-like ATPases
A3L20_07815	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_07835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_07835	SM00387	Histidine kinase-like ATPases
A3L20_07835	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_07885	SM00363	S4 RNA-binding domain
A3L20_07905	SM00448	cheY-homologous receiver domain
A3L20_07905	SM00862	Transcriptional regulatory protein, C terminal
A3L20_07910	SM00091	PAS domain
A3L20_07910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_07910	SM00387	Histidine kinase-like ATPases
A3L20_07910	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_07920	SM00257	Lysin motif
A3L20_07945	SM00487	DEAD-like helicases superfamily
A3L20_07945	SM00490	helicase superfamily c-terminal domain
A3L20_07955	SM00257	Lysin motif
A3L20_07965	SM00422	helix_turn_helix, mercury resistance
A3L20_07975	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A3L20_07990	SM00644	A3L20_07990
A3L20_08000	SM00870	A3L20_08000
A3L20_08010	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L20_08015	SM01240	A3L20_08015
A3L20_08075	SM00411	bacterial (prokaryotic) histone like domain
A3L20_08100	SM00562	A3L20_08100
A3L20_08120	SM00028	Tetratricopeptide repeats
A3L20_08125	SM00914	A3L20_08125
A3L20_08170	SM00986	Uracil DNA glycosylase superfamily
A3L20_08170	SM00987	UreE urease accessory protein, C-terminal domain 
A3L20_08190	SM00851	MGS-like domain
A3L20_08235	SM00479	A3L20_08235
A3L20_08235	SM00487	DEAD-like helicases superfamily
A3L20_08235	SM00491	A3L20_08235
A3L20_08260	SM00478	endonuclease III
A3L20_08270	SM00060	Fibronectin type 3 domain
A3L20_08330	SM00981	A3L20_08330
A3L20_08340	SM00491	A3L20_08340
A3L20_08415	SM00450	Rhodanese Homology Domain
A3L20_08455	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A3L20_08455	SM00475	5'-3' exonuclease
A3L20_08575	SM00357	Cold shock protein domain
A3L20_08625	SM00849	Metallo-beta-lactamase superfamily
A3L20_08630	SM00422	helix_turn_helix, mercury resistance
A3L20_08630	SM00871	Bacterial transcription activator, effector binding domain
A3L20_08695	SM00448	cheY-homologous receiver domain
A3L20_08700	SM00073	Histidine Phosphotransfer domain
A3L20_08700	SM00260	Two component signalling adaptor domain
A3L20_08700	SM00387	Histidine kinase-like ATPases
A3L20_08700	SM01231	A3L20_08700
A3L20_08720	SM00138	Methyltransferase, chemotaxis proteins 
A3L20_08795	SM00382	ATPases associated with a variety of cellular activities
A3L20_08830	SM00260	Two component signalling adaptor domain
A3L20_08830	SM00448	cheY-homologous receiver domain
A3L20_08900	SM00382	ATPases associated with a variety of cellular activities
A3L20_08900	SM00962	SRP54-type protein, GTPase domain
A3L20_08915	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A3L20_08960	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_08980	SM00382	ATPases associated with a variety of cellular activities
A3L20_08995	SM00849	Metallo-beta-lactamase superfamily
A3L20_08995	SM01027	Beta-Casp domain
A3L20_09030	SM00855	Phosphoglycerate mutase family
A3L20_09050	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_09095	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A3L20_09120	SM00422	helix_turn_helix, mercury resistance
A3L20_09200	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_09235	SM00421	helix_turn_helix, Lux Regulon
A3L20_09235	SM00448	cheY-homologous receiver domain
A3L20_09245	SM00382	ATPases associated with a variety of cellular activities
A3L20_09260	SM00155	Phospholipase D. Active site motifs.
A3L20_09280	SM00919	Malic enzyme, NAD binding domain
A3L20_09280	SM01274	A3L20_09280
A3L20_09285	SM00387	Histidine kinase-like ATPases
A3L20_09290	SM00448	cheY-homologous receiver domain
A3L20_09295	SM00487	DEAD-like helicases superfamily
A3L20_09295	SM00490	helicase superfamily c-terminal domain
A3L20_09490	SM00854	Bacterial capsule synthesis protein PGA_cap
A3L20_09525	SM00850	LytTr DNA-binding domain
A3L20_09565	SM00450	Rhodanese Homology Domain
A3L20_09645	SM01133	A3L20_09645
A3L20_09655	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A3L20_09705	SM01011	Aminopeptidase P, N-terminal domain
A3L20_09725	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A3L20_09725	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A3L20_09725	SM00493	A3L20_09725
A3L20_09815	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A3L20_09825	SM00382	ATPases associated with a variety of cellular activities
A3L20_09830	SM00382	ATPases associated with a variety of cellular activities
A3L20_09865	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_09885	SM00382	ATPases associated with a variety of cellular activities
A3L20_09890	SM00382	ATPases associated with a variety of cellular activities
A3L20_09955	SM00287	Bacterial SH3 domain homologues
A3L20_09965	SM00382	ATPases associated with a variety of cellular activities
A3L20_09970	SM00857	Resolvase, N terminal domain
A3L20_09975	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_09980	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_10220	SM00287	Bacterial SH3 domain homologues
A3L20_10220	SM00644	A3L20_10220
A3L20_10230	SM00448	cheY-homologous receiver domain
A3L20_10230	SM00862	Transcriptional regulatory protein, C terminal
A3L20_10235	SM00387	Histidine kinase-like ATPases
A3L20_10235	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_10385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_10410	SM00460	Transglutaminase/protease-like homologues
A3L20_10430	SM00966	SpoVT / AbrB like domain 
A3L20_10440	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_10480	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_10480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_10540	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A3L20_10600	SM00855	Phosphoglycerate mutase family
A3L20_10650	SM00155	Phospholipase D. Active site motifs.
A3L20_10675	SM01091	Transporter associated domain
A3L20_10765	SM00244	prohibitin homologues
A3L20_10775	SM00855	Phosphoglycerate mutase family
A3L20_10795	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_10800	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_10805	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_10910	SM00507	HNH nucleases
A3L20_10985	SM00507	HNH nucleases
A3L20_11015	SM00287	Bacterial SH3 domain homologues
A3L20_11015	SM00644	A3L20_11015
A3L20_11025	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_11060	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_11075	SM01005	Alanine racemase, C-terminal domain
A3L20_11105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_11280	SM00487	DEAD-like helicases superfamily
A3L20_11280	SM00490	helicase superfamily c-terminal domain
A3L20_11300	SM00829	Enoylreductase
A3L20_11325	SM00849	Metallo-beta-lactamase superfamily
A3L20_11340	SM00460	Transglutaminase/protease-like homologues
A3L20_11355	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A3L20_11375	SM00100	Cyclic nucleotide-monophosphate binding domain
A3L20_11375	SM00419	helix_turn_helix, cAMP Regulatory protein
A3L20_11380	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_11390	SM00852	Probable molybdopterin binding domain
A3L20_11450	SM00894	Excalibur calcium-binding domain
A3L20_11495	SM00028	Tetratricopeptide repeats
A3L20_11510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L20_11515	SM00382	ATPases associated with a variety of cellular activities
A3L20_11550	SM00567	E-Z type HEAT repeats
A3L20_11550	SM00932	Scaffold protein Nfu/NifU N terminal
A3L20_11570	SM00836	DALR anticodon binding domain
A3L20_11570	SM01016	Arginyl tRNA synthetase N terminal dom
A3L20_11675	SM00382	ATPases associated with a variety of cellular activities
A3L20_11730	SM00563	Phosphate acyltransferases
A3L20_11790	SM00646	A3L20_11790
A3L20_11835	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A3L20_11840	SM00421	helix_turn_helix, Lux Regulon
A3L20_11840	SM00448	cheY-homologous receiver domain
A3L20_11855	SM00829	Enoylreductase
A3L20_11880	SM01350	A3L20_11880
A3L20_11915	SM00382	ATPases associated with a variety of cellular activities
A3L20_11955	SM01091	Transporter associated domain
A3L20_11970	SM00387	Histidine kinase-like ATPases
A3L20_11970	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_11985	SM00882	Coenzyme A transferase
A3L20_11990	SM00882	Coenzyme A transferase
A3L20_12005	SM00382	ATPases associated with a variety of cellular activities
A3L20_12040	SM00219	Tyrosine kinase, catalytic domain
A3L20_12050	SM00014	Acid phosphatase homologues
A3L20_12085	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
A3L20_12260	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_12295	SM00823	Phosphopantetheine attachment site
A3L20_12295	SM00824	Thioesterase
A3L20_12300	SM00923	MbtH-like protein
A3L20_12320	SM00411	bacterial (prokaryotic) histone like domain
A3L20_12360	SM00363	S4 RNA-binding domain
A3L20_12365	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A3L20_12370	SM00382	ATPases associated with a variety of cellular activities
A3L20_12385	SM00849	Metallo-beta-lactamase superfamily
A3L20_12410	SM00100	Cyclic nucleotide-monophosphate binding domain
A3L20_12425	SM00849	Metallo-beta-lactamase superfamily
A3L20_12445	SM01059	Chloramphenicol acetyltransferase
A3L20_12470	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_12505	SM00357	Cold shock protein domain
A3L20_12530	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A3L20_12560	SM00382	ATPases associated with a variety of cellular activities
A3L20_12565	SM00382	ATPases associated with a variety of cellular activities
A3L20_12590	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_12610	SM00835	Cupin
A3L20_12685	SM01207	A3L20_12685
A3L20_12700	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_12715	SM00849	Metallo-beta-lactamase superfamily
A3L20_12725	SM00487	DEAD-like helicases superfamily
A3L20_12725	SM00490	helicase superfamily c-terminal domain
A3L20_12770	SM00507	HNH nucleases
A3L20_12840	SM00507	HNH nucleases
A3L20_12870	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_12875	SM00855	Phosphoglycerate mutase family
A3L20_12915	SM00421	helix_turn_helix, Lux Regulon
A3L20_12920	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_12925	SM00966	SpoVT / AbrB like domain 
A3L20_12945	SM00936	Penicillin-binding protein 5, C-terminal domain 
A3L20_12970	SM00823	Phosphopantetheine attachment site
A3L20_12975	SM00823	Phosphopantetheine attachment site
A3L20_13040	SM00507	HNH nucleases
A3L20_13060	SM00984	UDP binding domain
A3L20_13130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_13150	SM00047	Lysozyme subfamily 2
A3L20_13155	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_13185	SM00387	Histidine kinase-like ATPases
A3L20_13190	SM00421	helix_turn_helix, Lux Regulon
A3L20_13190	SM00448	cheY-homologous receiver domain
A3L20_13205	SM01022	A3L20_13205
A3L20_13285	SM00382	ATPases associated with a variety of cellular activities
A3L20_13315	SM00878	Biotin carboxylase C-terminal domain
A3L20_13380	SM00387	Histidine kinase-like ATPases
A3L20_13380	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_13385	SM00448	cheY-homologous receiver domain
A3L20_13385	SM00862	Transcriptional regulatory protein, C terminal
A3L20_13425	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_13455	SM00382	ATPases associated with a variety of cellular activities
A3L20_13460	SM00422	helix_turn_helix, mercury resistance
A3L20_13460	SM00871	Bacterial transcription activator, effector binding domain
A3L20_13495	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_13525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_13600	SM00448	cheY-homologous receiver domain
A3L20_13600	SM00862	Transcriptional regulatory protein, C terminal
A3L20_13610	SM00507	HNH nucleases
A3L20_13630	SM00382	ATPases associated with a variety of cellular activities
A3L20_13645	SM00382	ATPases associated with a variety of cellular activities
A3L20_13675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_13680	SM01209	A3L20_13680
A3L20_13720	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_13725	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_13815	SM00644	A3L20_13815
A3L20_13820	SM00382	ATPases associated with a variety of cellular activities
A3L20_13825	SM00507	HNH nucleases
A3L20_13905	SM00091	PAS domain
A3L20_13905	SM00387	Histidine kinase-like ATPases
A3L20_13905	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_13935	SM00382	ATPases associated with a variety of cellular activities
A3L20_13945	SM00387	Histidine kinase-like ATPases
A3L20_13945	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_13995	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_14025	SM00829	Enoylreductase
A3L20_14030	SM00014	Acid phosphatase homologues
A3L20_14035	SM00740	A3L20_14035
A3L20_14100	SM00287	Bacterial SH3 domain homologues
A3L20_14115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_14190	SM00480	DNA polymerase III beta subunit
A3L20_14290	SM00465	GIY-YIG type nucleases (URI domain)
A3L20_14380	SM00448	cheY-homologous receiver domain
A3L20_14380	SM00862	Transcriptional regulatory protein, C terminal
A3L20_14385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_14385	SM00387	Histidine kinase-like ATPases
A3L20_14385	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_14400	SM00382	ATPases associated with a variety of cellular activities
A3L20_14435	SM00642	Alpha-amylase domain
A3L20_14455	SM00871	Bacterial transcription activator, effector binding domain
A3L20_14475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_14580	SM00382	ATPases associated with a variety of cellular activities
A3L20_14595	SM00420	helix_turn_helix, Deoxyribose operon repressor
A3L20_14595	SM01134	A3L20_14595
A3L20_14765	SM00482	DNA polymerase A domain
A3L20_14810	SM00493	A3L20_14810
A3L20_14835	SM00646	A3L20_14835
A3L20_14940	SM00857	Resolvase, N terminal domain
A3L20_14955	SM00861	Transketolase, pyrimidine binding domain
A3L20_15005	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L20_15005	SM00382	ATPases associated with a variety of cellular activities
A3L20_15055	SM00060	Fibronectin type 3 domain
A3L20_15055	SM00495	Chitin-binding domain type 3
A3L20_15160	SM00341	Helicase and RNase D C-terminal
A3L20_15160	SM00487	DEAD-like helicases superfamily
A3L20_15160	SM00490	helicase superfamily c-terminal domain
A3L20_15160	SM00956	A3L20_15160
A3L20_15205	SM00646	A3L20_15205
A3L20_15220	SM01131	A3L20_15220
A3L20_15235	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L20_15255	SM01130	A3L20_15255
A3L20_15275	SM00091	PAS domain
A3L20_15275	SM00382	ATPases associated with a variety of cellular activities
A3L20_15335	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A3L20_15360	SM00248	ankyrin repeats
A3L20_15395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_15395	SM00387	Histidine kinase-like ATPases
A3L20_15395	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_15400	SM00448	cheY-homologous receiver domain
A3L20_15400	SM00862	Transcriptional regulatory protein, C terminal
A3L20_15600	SM00382	ATPases associated with a variety of cellular activities
A3L20_15605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_15665	SM00062	Bacterial periplasmic substrate-binding proteins
A3L20_15670	SM00382	ATPases associated with a variety of cellular activities
A3L20_15695	SM00028	Tetratricopeptide repeats
A3L20_15755	SM00849	Metallo-beta-lactamase superfamily
A3L20_15795	SM00382	ATPases associated with a variety of cellular activities
A3L20_15835	SM00830	Chorismate mutase type II
A3L20_15865	SM00287	Bacterial SH3 domain homologues
A3L20_15910	SM00382	ATPases associated with a variety of cellular activities
A3L20_15930	SM01133	A3L20_15930
A3L20_15965	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_15985	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A3L20_16000	SM00346	helix_turn_helix isocitrate lyase regulation
A3L20_16035	SM00098	Alkaline phosphatase homologues
A3L20_16045	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_16120	SM01060	A3L20_16120
A3L20_16195	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_16200	SM00889	Elongation factor G, domain IV
A3L20_16215	SM00773	Proposed nucleic acid binding domain
A3L20_16220	SM00860	SMI1 / KNR4 family
A3L20_16235	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_16235	SM00871	Bacterial transcription activator, effector binding domain
A3L20_16260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_16355	SM01058	CarD-like/TRCF domain
A3L20_16415	SM00797	Allophanate hydrolase subunit 2
A3L20_16420	SM00796	Allophanate hydrolase subunit 1
A3L20_16425	SM00346	helix_turn_helix isocitrate lyase regulation
A3L20_16440	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_16520	SM00849	Metallo-beta-lactamase superfamily
A3L20_16600	SM00870	A3L20_16600
A3L20_16605	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_16625	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A3L20_16625	SM00091	PAS domain
A3L20_16625	SM00387	Histidine kinase-like ATPases
A3L20_16625	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_16650	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_16655	SM00465	GIY-YIG type nucleases (URI domain)
A3L20_16685	SM00448	cheY-homologous receiver domain
A3L20_16690	SM00387	Histidine kinase-like ATPases
A3L20_16765	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_16775	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_16895	SM00382	ATPases associated with a variety of cellular activities
A3L20_16915	SM00226	Low molecular weight phosphatase family
A3L20_16925	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_16970	SM00448	cheY-homologous receiver domain
A3L20_16970	SM00862	Transcriptional regulatory protein, C terminal
A3L20_16975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_16975	SM00387	Histidine kinase-like ATPases
A3L20_16975	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_17005	SM00387	Histidine kinase-like ATPases
A3L20_17005	SM00421	helix_turn_helix, Lux Regulon
A3L20_17005	SM00448	cheY-homologous receiver domain
A3L20_17020	SM00382	ATPases associated with a variety of cellular activities
A3L20_17025	SM00387	Histidine kinase-like ATPases
A3L20_17025	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_17030	SM00448	cheY-homologous receiver domain
A3L20_17030	SM00862	Transcriptional regulatory protein, C terminal
A3L20_17110	SM00382	ATPases associated with a variety of cellular activities
A3L20_17120	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_17135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_17135	SM00387	Histidine kinase-like ATPases
A3L20_17135	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_17140	SM00448	cheY-homologous receiver domain
A3L20_17140	SM00862	Transcriptional regulatory protein, C terminal
A3L20_17205	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_17225	SM00644	A3L20_17225
A3L20_17325	SM00857	Resolvase, N terminal domain
A3L20_17365	SM00854	Bacterial capsule synthesis protein PGA_cap
A3L20_17390	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_17445	SM00382	ATPases associated with a variety of cellular activities
A3L20_17555	SM00382	ATPases associated with a variety of cellular activities
A3L20_17570	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_17630	SM01266	A3L20_17630
A3L20_17695	SM00028	Tetratricopeptide repeats
A3L20_17720	SM01091	Transporter associated domain
A3L20_17725	SM00422	helix_turn_helix, mercury resistance
A3L20_17800	SM01350	A3L20_17800
A3L20_17805	SM00861	Transketolase, pyrimidine binding domain
A3L20_17830	SM00914	A3L20_17830
A3L20_17860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_17860	SM00866	A3L20_17860
A3L20_17895	SM00849	Metallo-beta-lactamase superfamily
A3L20_17960	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_17965	SM00636	A3L20_17965
A3L20_17990	SM00871	Bacterial transcription activator, effector binding domain
A3L20_18005	SM00382	ATPases associated with a variety of cellular activities
A3L20_18090	SM00849	Metallo-beta-lactamase superfamily
A3L20_18095	SM00829	Enoylreductase
A3L20_18205	SM00829	Enoylreductase
A3L20_18210	SM00855	Phosphoglycerate mutase family
A3L20_18220	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A3L20_18220	SM00534	ATPase domain of DNA mismatch repair MUTS family
A3L20_18230	SM00642	Alpha-amylase domain
A3L20_18280	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_18285	SM00829	Enoylreductase
A3L20_18295	SM00028	Tetratricopeptide repeats
A3L20_18355	SM00858	A3L20_18355
A3L20_18425	SM00382	ATPases associated with a variety of cellular activities
A3L20_18440	SM00014	Acid phosphatase homologues
A3L20_18450	SM00060	Fibronectin type 3 domain
A3L20_18450	SM00495	Chitin-binding domain type 3
A3L20_18500	SM00028	Tetratricopeptide repeats
A3L20_18510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_18510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_18510	SM00319	Homologues of the ligand binding domain of Tar
A3L20_18530	SM01276	A3L20_18530
A3L20_18545	SM00052	Putative diguanylate phosphodiesterase
A3L20_18545	SM00091	PAS domain
A3L20_18545	SM00267	diguanylate cyclase
A3L20_18555	SM00382	ATPases associated with a variety of cellular activities
A3L20_18570	SM00646	A3L20_18570
A3L20_18600	SM00387	Histidine kinase-like ATPases
A3L20_18600	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_18605	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
A3L20_18655	SM00479	A3L20_18655
A3L20_18660	SM00357	Cold shock protein domain
A3L20_18685	SM01022	A3L20_18685
A3L20_18740	SM00822	A3L20_18740
A3L20_18795	SM00852	Probable molybdopterin binding domain
A3L20_18810	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_18830	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A3L20_18830	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A3L20_18930	SM00382	ATPases associated with a variety of cellular activities
A3L20_18940	SM00420	helix_turn_helix, Deoxyribose operon repressor
A3L20_18955	SM00434	DNA Topoisomerase IV
A3L20_18960	SM00387	Histidine kinase-like ATPases
A3L20_18960	SM00433	TopoisomeraseII
A3L20_18965	SM00881	CoA binding domain
A3L20_18970	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A3L20_18975	SM00448	cheY-homologous receiver domain
A3L20_18975	SM00862	Transcriptional regulatory protein, C terminal
A3L20_18990	SM01207	A3L20_18990
A3L20_19005	SM00257	Lysin motif
A3L20_19005	SM00636	A3L20_19005
A3L20_19020	SM00479	A3L20_19020
A3L20_19030	SM00382	ATPases associated with a variety of cellular activities
A3L20_19075	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A3L20_19110	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_19140	SM00644	A3L20_19140
A3L20_19140	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
A3L20_19145	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A3L20_19160	SM00091	PAS domain
A3L20_19160	SM00387	Histidine kinase-like ATPases
A3L20_19160	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_19195	SM01058	CarD-like/TRCF domain
A3L20_19360	SM00287	Bacterial SH3 domain homologues
A3L20_19360	SM00641	Glycosyl hydrolases family 25
A3L20_19365	SM00382	ATPases associated with a variety of cellular activities
A3L20_19370	SM00382	ATPases associated with a variety of cellular activities
A3L20_19385	SM00861	Transketolase, pyrimidine binding domain
A3L20_19400	SM00382	ATPases associated with a variety of cellular activities
A3L20_19405	SM00062	Bacterial periplasmic substrate-binding proteins
A3L20_19430	SM00857	Resolvase, N terminal domain
A3L20_19495	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_19500	SM01230	A3L20_19500
A3L20_19505	SM00422	helix_turn_helix, mercury resistance
A3L20_19530	SM00382	ATPases associated with a variety of cellular activities
A3L20_19555	SM00287	Bacterial SH3 domain homologues
A3L20_19570	SM00420	helix_turn_helix, Deoxyribose operon repressor
A3L20_19570	SM01134	A3L20_19570
A3L20_19600	SM00636	A3L20_19600
A3L20_19620	SM00411	bacterial (prokaryotic) histone like domain
A3L20_19650	SM00421	helix_turn_helix, Lux Regulon
A3L20_19665	SM00382	ATPases associated with a variety of cellular activities
A3L20_19690	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_19700	SM00478	endonuclease III
A3L20_19730	SM00052	Putative diguanylate phosphodiesterase
A3L20_19730	SM00091	PAS domain
A3L20_19730	SM00267	diguanylate cyclase
A3L20_19780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_19795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_19795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_19800	SM00148	Phospholipase C, catalytic domain (part); domain X
A3L20_19810	SM00257	Lysin motif
A3L20_19870	SM00382	ATPases associated with a variety of cellular activities
A3L20_19875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_19915	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_19915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_19930	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_19935	SM00047	Lysozyme subfamily 2
A3L20_19950	SM00853	MutL C terminal dimerisation domain
A3L20_19950	SM01340	A3L20_19950
A3L20_19955	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A3L20_19955	SM00534	ATPase domain of DNA mismatch repair MUTS family
A3L20_19970	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_20000	SM00322	K homology RNA-binding domain
A3L20_20000	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L20_20010	SM00382	ATPases associated with a variety of cellular activities
A3L20_20015	SM00852	Probable molybdopterin binding domain
A3L20_20065	SM00382	ATPases associated with a variety of cellular activities
A3L20_20075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_20075	SM00866	A3L20_20075
A3L20_20080	SM00382	ATPases associated with a variety of cellular activities
A3L20_20080	SM00843	A3L20_20080
A3L20_20095	SM00849	Metallo-beta-lactamase superfamily
A3L20_20100	SM01130	A3L20_20100
A3L20_20110	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A3L20_20140	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L20_20140	SM00322	K homology RNA-binding domain
A3L20_20145	SM01387	A3L20_20145
A3L20_20150	SM00904	Riboflavin kinase
A3L20_20185	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L20_20185	SM00322	K homology RNA-binding domain
A3L20_20195	SM00479	A3L20_20195
A3L20_20195	SM00481	DNA polymerase alpha chain like domain
A3L20_20205	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A3L20_20250	SM00382	ATPases associated with a variety of cellular activities
A3L20_20250	SM01086	C-terminal, D2-small domain, of ClpB protein
A3L20_20270	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A3L20_20270	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A3L20_20270	SM00493	A3L20_20270
A3L20_20280	SM00881	CoA binding domain
A3L20_20330	SM00382	ATPases associated with a variety of cellular activities
A3L20_20330	SM00962	SRP54-type protein, GTPase domain
A3L20_20330	SM00963	SRP54-type protein, helical bundle domain
A3L20_20340	SM00382	ATPases associated with a variety of cellular activities
A3L20_20340	SM00962	SRP54-type protein, GTPase domain
A3L20_20340	SM00963	SRP54-type protein, helical bundle domain
A3L20_20345	SM00968	SMC proteins Flexible Hinge Domain
A3L20_20350	SM00358	Double-stranded RNA binding motif
A3L20_20350	SM00535	Ribonuclease III family
A3L20_20360	SM00822	A3L20_20360
A3L20_20365	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A3L20_20380	SM00487	DEAD-like helicases superfamily
A3L20_20380	SM00490	helicase superfamily c-terminal domain
A3L20_20385	SM01120	A3L20_20385
A3L20_20385	SM01121	A3L20_20385
A3L20_20405	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
A3L20_20420	SM00220	Serine/Threonine protein kinases, catalytic domain
A3L20_20420	SM00740	A3L20_20420
A3L20_20425	SM00331	Sigma factor PP2C-like phosphatases
A3L20_20425	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A3L20_20450	SM00487	DEAD-like helicases superfamily
A3L20_20450	SM00490	helicase superfamily c-terminal domain
A3L20_20460	SM01409	A3L20_20460
A3L20_20465	SM00072	Guanylate kinase homologues.
A3L20_20480	SM00831	Cation transporter/ATPase, N-terminus
A3L20_20530	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A3L20_20545	SM00851	MGS-like domain
A3L20_20545	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A3L20_20545	SM01209	A3L20_20545
A3L20_20550	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A3L20_20575	SM00363	S4 RNA-binding domain
A3L20_20600	SM00363	S4 RNA-binding domain
A3L20_20645	SM00864	Tubulin/FtsZ family, GTPase domain
A3L20_20645	SM00865	Tubulin/FtsZ family, C-terminal domain
A3L20_20650	SM00842	Cell division protein FtsA
A3L20_20690	SM00740	A3L20_20690
A3L20_20695	SM00740	A3L20_20695
A3L20_20725	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
A3L20_20785	SM00855	Phosphoglycerate mutase family
A3L20_20855	SM00878	Biotin carboxylase C-terminal domain
A3L20_20875	SM00670	Large family of predicted nucleotide-binding domains
A3L20_20900	SM00838	Elongation factor G C-terminus
A3L20_20980	SM00861	Transketolase, pyrimidine binding domain
A3L20_21010	SM00849	Metallo-beta-lactamase superfamily
A3L20_21075	SM00052	Putative diguanylate phosphodiesterase
A3L20_21120	SM00267	diguanylate cyclase
A3L20_21165	SM00387	Histidine kinase-like ATPases
A3L20_21165	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_21180	SM00354	helix_turn _helix lactose operon repressor
A3L20_21200	SM00642	Alpha-amylase domain
A3L20_21205	SM00642	Alpha-amylase domain
A3L20_21210	SM00382	ATPases associated with a variety of cellular activities
A3L20_21245	SM00382	ATPases associated with a variety of cellular activities
A3L20_21325	SM01007	Class II Aldolase and Adducin N-terminal domain
A3L20_21355	SM00267	diguanylate cyclase
A3L20_21390	SM01061	CAT RNA binding domain
A3L20_21400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_21400	SM00866	A3L20_21400
A3L20_21415	SM00849	Metallo-beta-lactamase superfamily
A3L20_21510	SM00387	Histidine kinase-like ATPases
A3L20_21520	SM00936	Penicillin-binding protein 5, C-terminal domain 
A3L20_21525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_21530	SM00382	ATPases associated with a variety of cellular activities
A3L20_21555	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_21575	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A3L20_21670	SM00354	helix_turn _helix lactose operon repressor
A3L20_21690	SM00704	CDGSH-type zinc finger. Function unknown.
A3L20_21720	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_21720	SM00876	Biotin and Thiamin Synthesis associated domain
A3L20_21770	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_21805	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A3L20_21820	SM00849	Metallo-beta-lactamase superfamily
A3L20_21840	SM00849	Metallo-beta-lactamase superfamily
A3L20_21855	SM00831	Cation transporter/ATPase, N-terminus
A3L20_21895	SM00382	ATPases associated with a variety of cellular activities
A3L20_21905	SM00062	Bacterial periplasmic substrate-binding proteins
A3L20_21905	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A3L20_21940	SM00861	Transketolase, pyrimidine binding domain
A3L20_21960	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A3L20_21970	SM00091	PAS domain
A3L20_21970	SM00382	ATPases associated with a variety of cellular activities
A3L20_21995	SM00448	cheY-homologous receiver domain
A3L20_22000	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A3L20_22015	SM00363	S4 RNA-binding domain
A3L20_22020	SM00861	Transketolase, pyrimidine binding domain
A3L20_22055	SM00878	Biotin carboxylase C-terminal domain
A3L20_22100	SM00382	ATPases associated with a variety of cellular activities
A3L20_22120	SM00841	Elongation factor P, C-terminal
A3L20_22120	SM01185	A3L20_22120
A3L20_22155	SM00529	Helix-turn-helix diphteria tox regulatory element
A3L20_22185	SM00450	Rhodanese Homology Domain
A3L20_22195	SM00354	helix_turn _helix lactose operon repressor
A3L20_22250	SM00487	DEAD-like helicases superfamily
A3L20_22250	SM00490	helicase superfamily c-terminal domain
A3L20_22285	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A3L20_22320	SM00382	ATPases associated with a variety of cellular activities
A3L20_22375	SM01018	B12 binding domain
A3L20_22400	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_22410	SM00849	Metallo-beta-lactamase superfamily
A3L20_22445	SM00382	ATPases associated with a variety of cellular activities
A3L20_22510	SM00382	ATPases associated with a variety of cellular activities
A3L20_22525	SM00518	AP endonuclease family 2
A3L20_22530	SM00487	DEAD-like helicases superfamily
A3L20_22530	SM00490	helicase superfamily c-terminal domain
A3L20_22565	SM00400	zinc finger
A3L20_22565	SM00493	A3L20_22565
A3L20_22565	SM00766	DNA primase DnaG DnaB-binding
A3L20_22575	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L20_22610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L20_22640	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_22655	SM00271	DnaJ molecular chaperone homology domain
A3L20_22675	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_22685	SM00838	Elongation factor G C-terminus
A3L20_22715	SM00849	Metallo-beta-lactamase superfamily
A3L20_22725	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A3L20_22745	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L20_22755	SM01103	A3L20_22755
A3L20_22810	SM00954	Region found in RelA / SpoT proteins
A3L20_22820	SM00098	Alkaline phosphatase homologues
A3L20_22845	SM00855	Phosphoglycerate mutase family
A3L20_22890	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_22915	SM00382	ATPases associated with a variety of cellular activities
A3L20_23015	SM00732	Likely ribonuclease with RNase H fold.
A3L20_23025	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A3L20_23060	SM00028	Tetratricopeptide repeats
A3L20_23080	SM00382	ATPases associated with a variety of cellular activities
A3L20_23120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L20_23120	SM00954	Region found in RelA / SpoT proteins
A3L20_23165	SM01323	A3L20_23165
A3L20_23185	SM00382	ATPases associated with a variety of cellular activities
A3L20_23190	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A3L20_23215	SM00257	Lysin motif
A3L20_23270	SM00382	ATPases associated with a variety of cellular activities
A3L20_23275	SM00387	Histidine kinase-like ATPases
A3L20_23280	SM00448	cheY-homologous receiver domain
A3L20_23280	SM00862	Transcriptional regulatory protein, C terminal
A3L20_23290	SM01317	A3L20_23290
A3L20_23380	SM00257	Lysin motif
A3L20_23390	SM01004	Delta-aminolevulinic acid dehydratase
A3L20_23415	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_23430	SM00382	ATPases associated with a variety of cellular activities
A3L20_23430	SM00464	Found in ATP-dependent protease La (LON)
A3L20_23435	SM00382	ATPases associated with a variety of cellular activities
A3L20_23440	SM00382	ATPases associated with a variety of cellular activities
A3L20_23440	SM00994	ClpX C4-type zinc finger
A3L20_23440	SM01086	C-terminal, D2-small domain, of ClpB protein
A3L20_23490	SM00909	Sporulation and spore germination
A3L20_23520	SM00421	helix_turn_helix, Lux Regulon
A3L20_23540	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_23565	SM00382	ATPases associated with a variety of cellular activities
A3L20_23615	SM00465	GIY-YIG type nucleases (URI domain)
A3L20_23625	SM00893	Electron transfer flavoprotein domain
A3L20_23630	SM00893	Electron transfer flavoprotein domain
A3L20_23685	SM00382	ATPases associated with a variety of cellular activities
A3L20_23690	SM00387	Histidine kinase-like ATPases
A3L20_23690	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_23695	SM00448	cheY-homologous receiver domain
A3L20_23695	SM00862	Transcriptional regulatory protein, C terminal
A3L20_23710	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A3L20_23725	SM00382	ATPases associated with a variety of cellular activities
A3L20_23740	SM00725	NEAr Transporter domain
A3L20_23745	SM00725	NEAr Transporter domain
A3L20_23750	SM00725	NEAr Transporter domain
A3L20_23760	SM00363	S4 RNA-binding domain
A3L20_23765	SM00463	Small MutS-related domain
A3L20_23765	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A3L20_23765	SM00534	ATPase domain of DNA mismatch repair MUTS family
A3L20_23770	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A3L20_23770	SM00481	DNA polymerase alpha chain like domain
A3L20_23770	SM00483	DNA polymerase X family
A3L20_23805	SM00873	B3/4 domain
A3L20_23805	SM00874	tRNA synthetase B5 domain
A3L20_23805	SM00896	Ferredoxin-fold anticodon binding domain
A3L20_23815	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A3L20_23880	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A3L20_23905	SM00382	ATPases associated with a variety of cellular activities
A3L20_23925	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A3L20_23940	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A3L20_23940	SM01232	A3L20_23940
A3L20_23945	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A3L20_23945	SM00474	3'-5' exonuclease
A3L20_23945	SM00475	5'-3' exonuclease
A3L20_23945	SM00482	DNA polymerase A domain
A3L20_23950	SM00091	PAS domain
A3L20_23950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_23950	SM00387	Histidine kinase-like ATPases
A3L20_23950	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_23955	SM00448	cheY-homologous receiver domain
A3L20_23955	SM00862	Transcriptional regulatory protein, C terminal
A3L20_23975	SM01329	A3L20_23975
A3L20_24020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_24025	SM00919	Malic enzyme, NAD binding domain
A3L20_24025	SM01274	A3L20_24025
A3L20_24030	SM00481	DNA polymerase alpha chain like domain
A3L20_24060	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L20_24070	SM00849	Metallo-beta-lactamase superfamily
A3L20_24125	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A3L20_24125	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A3L20_24245	SM00981	A3L20_24245
A3L20_24285	SM00363	S4 RNA-binding domain
A3L20_24285	SM01390	A3L20_24285
A3L20_24310	SM00363	S4 RNA-binding domain
A3L20_24315	SM01266	A3L20_24315
A3L20_24330	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L20_24350	SM00448	cheY-homologous receiver domain
A3L20_24350	SM00862	Transcriptional regulatory protein, C terminal
A3L20_24355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_24355	SM00387	Histidine kinase-like ATPases
A3L20_24355	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_24360	SM00248	ankyrin repeats
A3L20_24395	SM00354	helix_turn _helix lactose operon repressor
A3L20_24455	SM00422	helix_turn_helix, mercury resistance
A3L20_24470	SM00382	ATPases associated with a variety of cellular activities
A3L20_24470	SM00843	A3L20_24470
A3L20_24475	SM00646	A3L20_24475
A3L20_24515	SM00849	Metallo-beta-lactamase superfamily
A3L20_24535	SM00642	Alpha-amylase domain
A3L20_24550	SM00420	helix_turn_helix, Deoxyribose operon repressor
A3L20_24555	SM00363	S4 RNA-binding domain
A3L20_24575	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_24600	SM01058	CarD-like/TRCF domain
A3L20_24635	SM00852	Probable molybdopterin binding domain
A3L20_24650	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_24670	SM00450	Rhodanese Homology Domain
A3L20_24745	SM00382	ATPases associated with a variety of cellular activities
A3L20_24765	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_24800	SM00014	Acid phosphatase homologues
A3L20_24815	SM00852	Probable molybdopterin binding domain
A3L20_24895	SM00387	Histidine kinase-like ATPases
A3L20_24900	SM00387	Histidine kinase-like ATPases
A3L20_24900	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_24905	SM01060	A3L20_24905
A3L20_24935	SM00382	ATPases associated with a variety of cellular activities
A3L20_25010	SM00422	helix_turn_helix, mercury resistance
A3L20_25020	SM01234	A3L20_25020
A3L20_25025	SM00947	Carbonic anhydrase
A3L20_25115	SM00899	A3L20_25115
A3L20_25125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_25125	SM00387	Histidine kinase-like ATPases
A3L20_25125	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_25130	SM00448	cheY-homologous receiver domain
A3L20_25130	SM00862	Transcriptional regulatory protein, C terminal
A3L20_25160	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A3L20_25220	SM00382	ATPases associated with a variety of cellular activities
A3L20_25225	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_25225	SM00871	Bacterial transcription activator, effector binding domain
A3L20_25280	SM00382	ATPases associated with a variety of cellular activities
A3L20_25290	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_25300	SM00448	cheY-homologous receiver domain
A3L20_25300	SM00862	Transcriptional regulatory protein, C terminal
A3L20_25305	SM00387	Histidine kinase-like ATPases
A3L20_25320	SM00382	ATPases associated with a variety of cellular activities
A3L20_25340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A3L20_25340	SM00866	A3L20_25340
A3L20_25370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_25370	SM00387	Histidine kinase-like ATPases
A3L20_25370	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_25375	SM00448	cheY-homologous receiver domain
A3L20_25375	SM00862	Transcriptional regulatory protein, C terminal
A3L20_25380	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A3L20_25420	SM00357	Cold shock protein domain
A3L20_25435	SM00422	helix_turn_helix, mercury resistance
A3L20_25465	SM00642	Alpha-amylase domain
A3L20_25640	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L20_25650	SM00344	helix_turn_helix ASNC type
A3L20_25685	SM01298	A3L20_25685
A3L20_25690	SM00479	A3L20_25690
A3L20_25780	SM00871	Bacterial transcription activator, effector binding domain
A3L20_25825	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_25845	SM00287	Bacterial SH3 domain homologues
A3L20_25845	SM00644	A3L20_25845
A3L20_26015	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_26030	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_26100	SM00382	ATPases associated with a variety of cellular activities
A3L20_26230	SM00422	helix_turn_helix, mercury resistance
A3L20_26245	SM00855	Phosphoglycerate mutase family
A3L20_26255	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L20_26300	SM00382	ATPases associated with a variety of cellular activities
A3L20_26320	SM00382	ATPases associated with a variety of cellular activities
A3L20_26320	SM00930	A3L20_26320
A3L20_26335	SM00493	A3L20_26335
A3L20_26380	SM00849	Metallo-beta-lactamase superfamily
A3L20_26425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_26425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_26500	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_26525	SM00448	cheY-homologous receiver domain
A3L20_26525	SM00862	Transcriptional regulatory protein, C terminal
A3L20_26530	SM00387	Histidine kinase-like ATPases
A3L20_26530	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_26555	SM00014	Acid phosphatase homologues
A3L20_26570	SM00382	ATPases associated with a variety of cellular activities
A3L20_26585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_26585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_26590	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_26590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_26610	SM00347	helix_turn_helix multiple antibiotic resistance protein
A3L20_26705	SM01276	A3L20_26705
A3L20_26740	SM00363	S4 RNA-binding domain
A3L20_26750	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
A3L20_26755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_26790	SM00382	ATPases associated with a variety of cellular activities
A3L20_26820	SM00344	helix_turn_helix ASNC type
A3L20_26830	SM00344	helix_turn_helix ASNC type
A3L20_26835	SM00947	Carbonic anhydrase
A3L20_26840	SM01116	A3L20_26840
A3L20_26860	SM00382	ATPases associated with a variety of cellular activities
A3L20_26880	SM00448	cheY-homologous receiver domain
A3L20_26880	SM00862	Transcriptional regulatory protein, C terminal
A3L20_26895	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L20_26895	SM00357	Cold shock protein domain
A3L20_26895	SM00955	A3L20_26895
A3L20_26925	SM00644	A3L20_26925
A3L20_26955	SM00507	HNH nucleases
A3L20_27025	SM00507	HNH nucleases
A3L20_27135	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_27145	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_27190	SM01192	A3L20_27190
A3L20_27190	SM01193	A3L20_27190
A3L20_27210	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A3L20_27355	SM00028	Tetratricopeptide repeats
A3L20_27395	SM00487	DEAD-like helicases superfamily
A3L20_27395	SM00490	helicase superfamily c-terminal domain
A3L20_27410	SM00422	helix_turn_helix, mercury resistance
A3L20_27420	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_27435	SM00422	helix_turn_helix, mercury resistance
A3L20_27450	SM00382	ATPases associated with a variety of cellular activities
A3L20_27460	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A3L20_27460	SM00245	tail specific protease
A3L20_27470	SM00382	ATPases associated with a variety of cellular activities
A3L20_27480	SM00937	A3L20_27480
A3L20_27485	SM00957	SecA DEAD-like domain
A3L20_27485	SM00958	SecA preprotein cross-linking domain
A3L20_27495	SM00382	ATPases associated with a variety of cellular activities
A3L20_27530	SM00357	Cold shock protein domain
A3L20_27560	SM00644	A3L20_27560
A3L20_27655	SM00507	HNH nucleases
A3L20_27715	SM00487	DEAD-like helicases superfamily
A3L20_27730	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_27735	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_27740	SM00857	Resolvase, N terminal domain
A3L20_27780	SM00984	UDP binding domain
A3L20_27795	SM00382	ATPases associated with a variety of cellular activities
A3L20_27800	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
A3L20_27955	SM00287	Bacterial SH3 domain homologues
A3L20_27985	SM00287	Bacterial SH3 domain homologues
A3L20_28015	SM00487	DEAD-like helicases superfamily
A3L20_28015	SM00490	helicase superfamily c-terminal domain
A3L20_28065	SM00382	ATPases associated with a variety of cellular activities
A3L20_28090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_28090	SM00387	Histidine kinase-like ATPases
A3L20_28090	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_28095	SM00448	cheY-homologous receiver domain
A3L20_28095	SM00862	Transcriptional regulatory protein, C terminal
A3L20_28115	SM00984	UDP binding domain
A3L20_28225	SM00382	ATPases associated with a variety of cellular activities
A3L20_28230	SM00850	LytTr DNA-binding domain
A3L20_28310	SM00052	Putative diguanylate phosphodiesterase
A3L20_28310	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A3L20_28310	SM00091	PAS domain
A3L20_28310	SM00267	diguanylate cyclase
A3L20_28330	SM00382	ATPases associated with a variety of cellular activities
A3L20_28395	SM00226	Low molecular weight phosphatase family
A3L20_28410	SM00903	Flavin reductase like domain
A3L20_28445	SM00937	A3L20_28445
A3L20_28460	SM00357	Cold shock protein domain
A3L20_28460	SM00382	ATPases associated with a variety of cellular activities
A3L20_28460	SM00959	Rho termination factor, N-terminal domain
A3L20_28480	SM00448	cheY-homologous receiver domain
A3L20_28530	SM00155	Phospholipase D. Active site motifs.
A3L20_28540	SM00052	Putative diguanylate phosphodiesterase
A3L20_28540	SM00267	diguanylate cyclase
A3L20_28550	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_28560	SM00421	helix_turn_helix, Lux Regulon
A3L20_28560	SM00448	cheY-homologous receiver domain
A3L20_28575	SM00382	ATPases associated with a variety of cellular activities
A3L20_28615	SM00836	DALR anticodon binding domain
A3L20_28615	SM01016	Arginyl tRNA synthetase N terminal dom
A3L20_28655	SM00422	helix_turn_helix, mercury resistance
A3L20_28685	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L20_28695	SM00382	ATPases associated with a variety of cellular activities
A3L20_28735	SM00936	Penicillin-binding protein 5, C-terminal domain 
A3L20_28780	SM00986	Uracil DNA glycosylase superfamily
A3L20_28780	SM00987	UreE urease accessory protein, C-terminal domain 
A3L20_28790	SM00382	ATPases associated with a variety of cellular activities
A3L20_28800	SM00354	helix_turn _helix lactose operon repressor
A3L20_28830	SM00100	Cyclic nucleotide-monophosphate binding domain
A3L20_28840	SM00421	helix_turn_helix, Lux Regulon
A3L20_28840	SM00448	cheY-homologous receiver domain
A3L20_28845	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A3L20_28855	SM00267	diguanylate cyclase
A3L20_28870	SM00448	cheY-homologous receiver domain
A3L20_28870	SM00850	LytTr DNA-binding domain
A3L20_28900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A3L20_28960	SM00382	ATPases associated with a variety of cellular activities
A3L20_28995	SM00448	cheY-homologous receiver domain
A3L20_28995	SM00850	LytTr DNA-binding domain
A3L20_29000	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A3L20_29000	SM00387	Histidine kinase-like ATPases
A3L20_29055	SM00487	DEAD-like helicases superfamily
A3L20_29055	SM00490	helicase superfamily c-terminal domain
A3L20_29060	SM01240	A3L20_29060
A3L20_29080	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A3L20_29080	SM00387	Histidine kinase-like ATPases
A3L20_29080	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_29095	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A3L20_29100	SM00849	Metallo-beta-lactamase superfamily
A3L20_29115	SM00091	PAS domain
A3L20_29115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A3L20_29115	SM00387	Histidine kinase-like ATPases
A3L20_29115	SM00388	His Kinase A (phosphoacceptor) domain
A3L20_29120	SM00448	cheY-homologous receiver domain
A3L20_29120	SM00862	Transcriptional regulatory protein, C terminal
A3L20_29145	SM00788	Adenylosuccinate synthetase
A3L20_29160	SM00267	diguanylate cyclase
A3L20_29205	SM00470	ParB-like nuclease domain
A3L20_29215	SM00470	ParB-like nuclease domain
A3L20_29225	SM01228	A3L20_29225
A3L20_29235	SM00393	Putative single-stranded nucleic acids-binding domain
A3L20_29235	SM01245	A3L20_29235
A3L20_29275	SM00060	Fibronectin type 3 domain
A3L20_29280	SM00060	Fibronectin type 3 domain
A3L20_29345	SM00400	zinc finger
A3L20_29355	SM00857	Resolvase, N terminal domain
A3L20_29440	SM00287	Bacterial SH3 domain homologues
A3L20_29440	SM00644	A3L20_29440
A3L20_29460	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_29510	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_29525	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_29595	SM00507	HNH nucleases
A3L20_29660	SM00507	HNH nucleases
A3L20_29750	SM00644	A3L20_29750
A3L20_29775	SM00857	Resolvase, N terminal domain
A3L20_29780	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_29785	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_29790	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_29895	SM00507	HNH nucleases
A3L20_29990	SM00506	Appr-1"-p processing enzyme
A3L20_30065	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A3L20_30065	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A3L20_30065	SM00493	A3L20_30065
A3L20_30110	SM00382	ATPases associated with a variety of cellular activities
A3L20_30120	SM00857	Resolvase, N terminal domain
A3L20_30140	SM00382	ATPases associated with a variety of cellular activities
A3L20_30145	SM00382	ATPases associated with a variety of cellular activities
A3L20_30150	SM00984	UDP binding domain
A3L20_30200	SM01209	A3L20_30200
A3L20_30225	SM00857	Resolvase, N terminal domain
A3L20_30240	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_30320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_30330	SM00966	SpoVT / AbrB like domain 
A3L20_30390	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_30395	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_30400	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_30450	SM00493	A3L20_30450
A3L20_30485	SM00857	Resolvase, N terminal domain
A3L20_30675	SM00287	Bacterial SH3 domain homologues
A3L20_30675	SM00644	A3L20_30675
A3L20_30770	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_30780	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_30785	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_30885	SM00857	Resolvase, N terminal domain
A3L20_30935	SM00857	Resolvase, N terminal domain
A3L20_30950	SM00644	A3L20_30950
A3L20_31045	SM00857	Resolvase, N terminal domain
A3L20_31075	SM00028	Tetratricopeptide repeats
A3L20_31125	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_31200	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_31240	SM00860	SMI1 / KNR4 family
A3L20_31295	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_31345	SM00028	Tetratricopeptide repeats
A3L20_31455	SM00507	HNH nucleases
A3L20_31475	SM00507	HNH nucleases
A3L20_31485	SM00507	HNH nucleases
A3L20_31525	SM00507	HNH nucleases
A3L20_31600	SM00411	bacterial (prokaryotic) histone like domain
A3L20_31610	SM00966	SpoVT / AbrB like domain 
A3L20_31625	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_31650	SM00860	SMI1 / KNR4 family
A3L20_31695	SM00342	helix_turn_helix, arabinose operon control protein
A3L20_31825	SM00052	Putative diguanylate phosphodiesterase
A3L20_31825	SM00091	PAS domain
A3L20_31825	SM00267	diguanylate cyclase
A3L20_31835	SM00506	Appr-1"-p processing enzyme
A3L20_31875	SM00644	A3L20_31875
A3L20_32010	SM00411	bacterial (prokaryotic) histone like domain
A3L20_32075	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A3L20_32075	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A3L20_32125	SM00752	Horizontally Transferred TransMembrane Domain
A3L20_32140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_32230	SM00758	A3L20_32230
A3L20_32250	SM00758	A3L20_32250
A3L20_32265	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A3L20_32290	SM00148	Phospholipase C, catalytic domain (part); domain X
A3L20_32290	SM00458	Ricin-type beta-trefoil
A3L20_32310	SM00028	Tetratricopeptide repeats
A3L20_32315	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L20_32340	SM00318	Staphylococcal nuclease homologues
A3L20_32350	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A3L20_32350	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A3L20_32350	SM00493	A3L20_32350
A3L20_32395	SM00487	DEAD-like helicases superfamily
A3L20_32430	SM00530	Helix-turn-helix XRE-family like proteins 
A3L20_32455	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
A3L20_32515	SM00480	DNA polymerase III beta subunit
A3L20_32550	SM00860	SMI1 / KNR4 family
A3L20_32575	SM00843	A3L20_32575
A3L20_32600	SM00422	helix_turn_helix, mercury resistance
