locus-tag class description LIT28_00005 IPR003593 AAA+ ATPase domain LIT28_00005 IPR001957 Chromosomal replication control, initiator DnaA LIT28_00005 IPR020591 Chromosomal replication control, initiator DnaA-like LIT28_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site LIT28_00005 IPR013317 Chromosomal replication initiator protein DnaA LIT28_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal LIT28_00005 IPR024633 DnaA N-terminal domain LIT28_00005 IPR038454 DnaA, N-terminal domain superfamily LIT28_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00005 IPR010921 Trp repressor/replication initiator LIT28_00010 IPR022637 DNA polymerase III, beta sliding clamp, central LIT28_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal LIT28_00010 IPR001001 DNA polymerase III, beta sliding clamp LIT28_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal LIT28_00015 IPR036986 RNA-binding S4 domain superfamily LIT28_00015 IPR014330 RNA-binding S4-related,YaaA LIT28_00015 IPR002942 RNA-binding S4 domain LIT28_00020 IPR018078 DNA-binding, RecF, conserved site LIT28_00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00020 IPR003395 RecF/RecN/SMC, N-terminal LIT28_00020 IPR042174 DNA-binding RecF, domain 2 LIT28_00020 IPR001238 DNA-binding, RecF LIT28_00025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_00025 IPR002288 DNA gyrase B subunit, C-terminal LIT28_00025 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_00025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_00025 IPR001241 DNA topoisomerase, type IIA LIT28_00025 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LIT28_00025 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal LIT28_00025 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_00025 IPR011557 DNA gyrase, subunit B LIT28_00025 IPR018522 DNA topoisomerase, type IIA, conserved site LIT28_00025 IPR006171 TOPRIM domain LIT28_00025 IPR034160 DNA gyrase subunit B, TOPRIM domain LIT28_00025 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 LIT28_00030 IPR005743 DNA gyrase, subunit A LIT28_00030 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat LIT28_00030 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal LIT28_00030 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LIT28_00030 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal LIT28_00030 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta LIT28_00030 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily LIT28_00060 IPR026988 YaaC-like protein LIT28_00065 IPR001093 IMP dehydrogenase/GMP reductase LIT28_00065 IPR015875 IMP dehydrogenase / GMP reductase, conserved site LIT28_00065 IPR000644 CBS domain LIT28_00065 IPR013785 Aldolase-type TIM barrel LIT28_00065 IPR005990 Inosine-5'-monophosphate dehydrogenase LIT28_00070 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LIT28_00070 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIT28_00070 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LIT28_00070 IPR012338 Beta-lactamase/transpeptidase-like LIT28_00070 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIT28_00070 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIT28_00075 IPR013785 Aldolase-type TIM barrel LIT28_00075 IPR033755 PdxS/SNZ N-terminal domain LIT28_00075 IPR011060 Ribulose-phosphate binding barrel LIT28_00075 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ LIT28_00080 IPR029062 Class I glutamine amidotransferase-like LIT28_00080 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO LIT28_00080 IPR021196 PdxT/SNO family, conserved site LIT28_00085 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LIT28_00085 IPR015866 Serine-tRNA synthetase, type1, N-terminal LIT28_00085 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIT28_00085 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_00085 IPR002317 Serine-tRNA ligase, type1 LIT28_00085 IPR033729 Serine-tRNA ligase catalytic core domain LIT28_00085 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily LIT28_00100 IPR002624 Deoxynucleoside kinase LIT28_00100 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00100 IPR031314 Deoxynucleoside kinase domain LIT28_00105 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00105 IPR031314 Deoxynucleoside kinase domain LIT28_00105 IPR002624 Deoxynucleoside kinase LIT28_00110 IPR036380 Isochorismatase-like superfamily LIT28_00110 IPR000868 Isochorismatase-like LIT28_00115 IPR016193 Cytidine deaminase-like LIT28_00115 IPR028883 tRNA-specific adenosine deaminase LIT28_00115 IPR002125 Cytidine and deoxycytidylate deaminase domain LIT28_00115 IPR016192 APOBEC/CMP deaminase, zinc-binding LIT28_00125 IPR003593 AAA+ ATPase domain LIT28_00125 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LIT28_00125 IPR022754 DNA polymerase III, gamma subunit, domain III LIT28_00125 IPR012763 DNA polymerase III, subunit gamma/ tau LIT28_00125 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00125 IPR001270 ClpA/B family LIT28_00130 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily LIT28_00130 IPR004401 Nucleoid-associated protein YbaB/EbfC family LIT28_00135 IPR000093 DNA recombination protein RecR LIT28_00135 IPR023627 Recombination protein RecR LIT28_00135 IPR023628 Recombination protein RecR, C4-type zinc finger LIT28_00135 IPR015967 Recombination protein RecR, conserved site LIT28_00135 IPR034137 RecR, TOPRIM domain LIT28_00135 IPR006171 TOPRIM domain LIT28_00140 IPR019644 Protein of unknown function DUF2508 LIT28_00145 IPR010001 SigmaK-factor processing regulatory BofA LIT28_00180 IPR000310 Orn/Lys/Arg decarboxylase, major domain LIT28_00180 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal LIT28_00180 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily LIT28_00180 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_00180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_00185 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00185 IPR039430 Thymidylate kinase-like domain LIT28_00185 IPR018095 Thymidylate kinase, conserved site LIT28_00185 IPR018094 Thymidylate kinase LIT28_00190 IPR015199 DNA polymerase III, delta subunit, C-terminal LIT28_00190 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00190 IPR004622 DNA polymerase III, delta prime subunit LIT28_00195 IPR007557 PSP1, C-terminal LIT28_00200 IPR010377 Initiation control protein YabA LIT28_00205 IPR007848 Methyltransferase small domain LIT28_00205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_00210 IPR035901 GIY-YIG endonuclease superfamily LIT28_00210 IPR000305 GIY-YIG endonuclease LIT28_00215 IPR014776 Tetrapyrrole methylase, subdomain 2 LIT28_00215 IPR014777 Tetrapyrrole methylase, subdomain 1 LIT28_00215 IPR035996 Tetrapyrrole methylase superfamily LIT28_00215 IPR000878 Tetrapyrrole methylase LIT28_00215 IPR018063 SAM-dependent methyltransferase RsmI, conserved site LIT28_00215 IPR008189 rRNA small subunit methyltransferase I LIT28_00220 IPR007159 SpoVT-AbrB domain LIT28_00220 IPR037914 SpoVT-AbrB domain superfamily LIT28_00220 IPR040678 AbrB, C-terminal LIT28_00225 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_00225 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIT28_00225 IPR002547 tRNA-binding domain LIT28_00225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_00225 IPR012340 Nucleic acid-binding, OB-fold LIT28_00225 IPR023457 Methionine-tRNA synthetase, type 2 LIT28_00225 IPR015413 Methionyl/Leucyl tRNA synthetase LIT28_00225 IPR014758 Methionyl-tRNA synthetase LIT28_00225 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal LIT28_00225 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LIT28_00225 IPR033911 Methioninyl-tRNA synthetase core domain LIT28_00225 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain LIT28_00230 IPR001130 TatD family LIT28_00230 IPR015991 Uncharacterised hydrolase TatD-type LIT28_00230 IPR018228 Deoxyribonuclease, TatD-related, conserved site LIT28_00230 IPR032466 Metal-dependent hydrolase LIT28_00235 IPR004466 Ribonuclease M5 LIT28_00235 IPR006171 TOPRIM domain LIT28_00235 IPR034141 Ribonuclease M5-like, TOPRIM domain LIT28_00235 IPR025156 Ribonuclease M5, C-terminal domain LIT28_00240 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LIT28_00240 IPR023165 rRNA adenine dimethylase-like LIT28_00240 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site LIT28_00240 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal LIT28_00240 IPR011530 Ribosomal RNA adenine dimethylase LIT28_00240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_00245 IPR008764 Peptidase U57, YabG LIT28_00250 IPR009366 Protein Veg LIT28_00255 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_00255 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_00260 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase LIT28_00260 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_00260 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_00260 IPR006204 GHMP kinase N-terminal domain LIT28_00260 IPR036554 GHMP kinase, C-terminal domain superfamily LIT28_00260 IPR013750 GHMP kinase, C-terminal domain LIT28_00265 IPR000836 Phosphoribosyltransferase domain LIT28_00265 IPR010078 Pur operon repressor LIT28_00265 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_00265 IPR036390 Winged helix DNA-binding domain superfamily LIT28_00265 IPR029057 Phosphoribosyltransferase-like LIT28_00265 IPR015265 Bacterial purine repressor, N-terminal LIT28_00270 IPR006056 RidA family LIT28_00270 IPR019897 RidA, conserved site LIT28_00270 IPR035959 RutC-like superfamily LIT28_00270 IPR006175 YjgF/YER057c/UK114 family LIT28_00275 IPR036751 Stage V sporulation protein G superfamily LIT28_00275 IPR007170 Stage V sporulation protein G LIT28_00280 IPR005835 Nucleotidyl transferase domain LIT28_00280 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_00280 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase LIT28_00280 IPR038009 GlmU, C-terminal LbH domain LIT28_00280 IPR001451 Hexapeptide repeat LIT28_00280 IPR011004 Trimeric LpxA-like superfamily LIT28_00280 IPR018357 Hexapeptide transferase, conserved site LIT28_00285 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type LIT28_00285 IPR005946 Ribose-phosphate pyrophosphokinase LIT28_00285 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain LIT28_00285 IPR000836 Phosphoribosyltransferase domain LIT28_00285 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site LIT28_00285 IPR029057 Phosphoribosyltransferase-like LIT28_00290 IPR018171 Peptidyl-tRNA hydrolase, conserved site LIT28_00290 IPR036416 Peptidyl-tRNA hydrolase superfamily LIT28_00290 IPR001328 Peptidyl-tRNA hydrolase LIT28_00300 IPR036101 CarD-like/TRCF domain superfamily LIT28_00300 IPR003711 CarD-like/TRCF domain LIT28_00300 IPR011545 DEAD/DEAH box helicase domain LIT28_00300 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_00300 IPR004576 Transcription-repair coupling factor LIT28_00300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00300 IPR037235 TRCF-like, C-terminal domain LIT28_00300 IPR005118 Transcription-repair-coupling factor, C-terminal domain LIT28_00300 IPR041471 UvrB, interaction domain LIT28_00300 IPR001650 Helicase, C-terminal LIT28_00305 IPR029016 GAF-like domain superfamily LIT28_00305 IPR014213 Sporulation stage V, protein T LIT28_00305 IPR007159 SpoVT-AbrB domain LIT28_00305 IPR037914 SpoVT-AbrB domain superfamily LIT28_00305 IPR039472 Sporulation stage V protein T, GAF domain LIT28_00310 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type LIT28_00310 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LIT28_00310 IPR002797 Polysaccharide biosynthesis protein LIT28_00315 IPR035013 YabN, N-terminal LIT28_00315 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted LIT28_00315 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LIT28_00315 IPR014777 Tetrapyrrole methylase, subdomain 1 LIT28_00315 IPR035996 Tetrapyrrole methylase superfamily LIT28_00315 IPR011551 NTP pyrophosphohydrolase MazG LIT28_00315 IPR000878 Tetrapyrrole methylase LIT28_00320 IPR025490 RNA-binding protein, HP1423 type LIT28_00320 IPR002942 RNA-binding S4 domain LIT28_00320 IPR036986 RNA-binding S4 domain superfamily LIT28_00325 IPR012504 Sporulation protein YabP LIT28_00325 IPR022476 Sporulation protein YabP/YqfC LIT28_00325 IPR038705 YabP superfamily LIT28_00330 IPR014242 Spore cortex biosynthesis protein, YabQ LIT28_00330 IPR019074 Spore cortex biosynthesis protein, YabQ-like LIT28_00340 IPR012340 Nucleic acid-binding, OB-fold LIT28_00340 IPR022967 RNA-binding domain, S1 LIT28_00340 IPR003029 S1 domain LIT28_00355 IPR014221 Sporulation stage II, protein E LIT28_00355 IPR001932 PPM-type phosphatase domain LIT28_00355 IPR036457 PPM-type phosphatase domain superfamily LIT28_00360 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal LIT28_00360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_00360 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LIT28_00360 IPR012094 tRNA(Ile)-lysidine synthase LIT28_00360 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal LIT28_00360 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain LIT28_00365 IPR005904 Hypoxanthine phosphoribosyl transferase LIT28_00365 IPR029057 Phosphoribosyltransferase-like LIT28_00365 IPR000836 Phosphoribosyltransferase domain LIT28_00370 IPR000642 Peptidase M41 LIT28_00370 IPR037219 Peptidase M41-like LIT28_00370 IPR003593 AAA+ ATPase domain LIT28_00370 IPR041569 AAA ATPase, AAA+ lid domain LIT28_00370 IPR003959 ATPase, AAA-type, core LIT28_00370 IPR003960 ATPase, AAA-type, conserved site LIT28_00370 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00370 IPR011546 Peptidase M41, FtsH extracellular LIT28_00370 IPR005936 Peptidase, FtsH LIT28_00375 IPR004619 Type III pantothenate kinase LIT28_00380 IPR016153 Heat shock protein Hsp33, N-terminal LIT28_00380 IPR016154 Heat shock protein Hsp33, C-terminal LIT28_00380 IPR000397 Heat shock protein Hsp33 LIT28_00385 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_00385 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_00385 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site LIT28_00385 IPR005859 Cysteine synthase CysK LIT28_00385 IPR005856 Cysteine synthase LIT28_00390 IPR019999 Anthranilate synthase component I-like LIT28_00390 IPR005801 ADC synthase LIT28_00390 IPR006805 Anthranilate synthase component I, N-terminal LIT28_00390 IPR015890 Chorismate-utilising enzyme, C-terminal LIT28_00395 IPR017926 Glutamine amidotransferase LIT28_00395 IPR029062 Class I glutamine amidotransferase-like LIT28_00395 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain LIT28_00400 IPR036038 Aminotransferase-like, PLP-dependent enzymes LIT28_00400 IPR018300 Aminotransferase, class IV, conserved site LIT28_00400 IPR001544 Aminotransferase class IV LIT28_00400 IPR017824 Aminodeoxychorismate lyase, class IV LIT28_00405 IPR000489 Pterin-binding domain LIT28_00405 IPR011005 Dihydropteroate synthase-like LIT28_00405 IPR006390 Dihydropteroate synthase LIT28_00410 IPR006156 Dihydroneopterin aldolase LIT28_00410 IPR006157 Dihydroneopterin aldolase/epimerase domain LIT28_00415 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily LIT28_00415 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK LIT28_00420 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_00420 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_00425 IPR035587 DUS-like, FMN-binding domain LIT28_00425 IPR013785 Aldolase-type TIM barrel LIT28_00425 IPR018517 tRNA-dihydrouridine synthase, conserved site LIT28_00425 IPR001269 tRNA-dihydrouridine synthase LIT28_00425 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 LIT28_00425 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal LIT28_00430 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LIT28_00430 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II LIT28_00430 IPR002313 Lysine-tRNA ligase, class II LIT28_00430 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_00430 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LIT28_00430 IPR012340 Nucleic acid-binding, OB-fold LIT28_00430 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal LIT28_00510 IPR008463 Transcriptional regulator CtsR LIT28_00510 IPR041908 CtsR, C-terminal domain superfamily LIT28_00510 IPR040465 CtsR, N-terminal HTH domain LIT28_00510 IPR041902 CtsR, N-terminal domain superfamily LIT28_00510 IPR041473 CtsR, C-terminal dimerization domain LIT28_00515 IPR001943 UVR domain LIT28_00515 IPR036876 UVR domain superfamily LIT28_00515 IPR025542 YacH protein LIT28_00520 IPR000749 ATP:guanido phosphotransferase LIT28_00520 IPR022415 ATP:guanido phosphotransferase active site LIT28_00520 IPR022414 ATP:guanido phosphotransferase, catalytic domain LIT28_00520 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LIT28_00520 IPR023660 Protein arginine kinase LIT28_00525 IPR001270 ClpA/B family LIT28_00525 IPR003593 AAA+ ATPase domain LIT28_00525 IPR003959 ATPase, AAA-type, core LIT28_00525 IPR019489 Clp ATPase, C-terminal LIT28_00525 IPR036628 Clp, N-terminal domain superfamily LIT28_00525 IPR004176 Clp, N-terminal LIT28_00525 IPR018368 ClpA/B, conserved site 1 LIT28_00525 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00525 IPR041546 ClpA/ClpB, AAA lid domain LIT28_00525 IPR001943 UVR domain LIT28_00525 IPR028299 ClpA/B, conserved site 2 LIT28_00530 IPR041166 LapB, rubredoxin metal binding domain LIT28_00530 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_00530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_00530 IPR003593 AAA+ ATPase domain LIT28_00530 IPR004504 DNA repair protein RadA LIT28_00530 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00530 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain LIT28_00535 IPR038331 DisA, linker domain superfamily LIT28_00535 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily LIT28_00535 IPR018906 DNA integrity scanning, DisA, linker region LIT28_00535 IPR003390 DNA integrity scanning protein, DisA, N-terminal LIT28_00535 IPR010994 RuvA domain 2-like LIT28_00535 IPR023763 DNA integrity scanning protein, DisA LIT28_00540 IPR002716 PIN domain LIT28_00540 IPR002792 TRAM domain LIT28_00540 IPR029060 PIN-like domain superfamily LIT28_00545 IPR034683 Cytidylyltransferase IspD/TarI LIT28_00545 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LIT28_00545 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site LIT28_00545 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_00550 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase LIT28_00550 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site LIT28_00550 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily LIT28_00555 IPR033910 Glutamyl-tRNA synthetase LIT28_00555 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding LIT28_00555 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 LIT28_00555 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_00555 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial LIT28_00555 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LIT28_00555 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LIT28_00555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_00560 IPR018357 Hexapeptide transferase, conserved site LIT28_00560 IPR001451 Hexapeptide repeat LIT28_00560 IPR010493 Serine acetyltransferase, N-terminal LIT28_00560 IPR042122 Serine acetyltransferase, N-terminal domain superfamily LIT28_00560 IPR005881 Serine O-acetyltransferase LIT28_00560 IPR011004 Trimeric LpxA-like superfamily LIT28_00565 IPR015803 Cysteine-tRNA ligase LIT28_00565 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR LIT28_00565 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase LIT28_00565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_00565 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIT28_00565 IPR032678 tRNA synthetases class I, catalytic domain LIT28_00570 IPR008226 Mini-ribonuclease 3 family LIT28_00570 IPR000999 Ribonuclease III domain LIT28_00570 IPR036389 Ribonuclease III, endonuclease domain superfamily LIT28_00575 IPR029028 Alpha/beta knot methyltransferases LIT28_00575 IPR004441 RNA methyltransferase TrmH family LIT28_00575 IPR001537 tRNA/rRNA methyltransferase, SpoU type LIT28_00575 IPR013123 RNA 2-O ribose methyltransferase, substrate binding LIT28_00575 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIT28_00575 IPR029064 50S ribosomal protein L30e-like LIT28_00580 IPR010298 Protein of unknown function DUF901 LIT28_00585 IPR014284 RNA polymerase sigma-70 like domain LIT28_00585 IPR014218 RNA polymerase sigma-H type LIT28_00585 IPR016371 RNA polymerase sigma-H factor LIT28_00585 IPR000943 RNA polymerase sigma-70 LIT28_00585 IPR007627 RNA polymerase sigma-70 region 2 LIT28_00585 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_00585 IPR013325 RNA polymerase sigma factor, region 2 LIT28_00585 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_00585 IPR000792 Transcription regulator LuxR, C-terminal LIT28_00590 IPR001705 Ribosomal protein L33 LIT28_00590 IPR011332 Zinc-binding ribosomal protein LIT28_00590 IPR038584 Ribosomal protein L33 superfamily LIT28_00595 IPR005807 SecE subunit of protein translocation complex, bacterial-like LIT28_00595 IPR038379 SecE superfamily LIT28_00595 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit LIT28_00600 IPR005824 KOW LIT28_00600 IPR006645 NusG, N-terminal LIT28_00600 IPR036735 NusG, N-terminal domain superfamily LIT28_00600 IPR014722 Ribosomal protein L2, domain 2 LIT28_00600 IPR001062 Transcription antitermination protein, NusG LIT28_00600 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site LIT28_00600 IPR008991 Translation protein SH3-like domain superfamily LIT28_00605 IPR000911 Ribosomal protein L11/L12 LIT28_00605 IPR020783 Ribosomal protein L11, C-terminal LIT28_00605 IPR006519 Ribosomal protein L11, bacterial-type LIT28_00605 IPR036769 Ribosomal protein L11, C-terminal domain superfamily LIT28_00605 IPR020785 Ribosomal protein L11, conserved site LIT28_00605 IPR020784 Ribosomal protein L11, N-terminal LIT28_00605 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily LIT28_00610 IPR023673 Ribosomal protein L1, conserved site LIT28_00610 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich LIT28_00610 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein LIT28_00610 IPR002143 Ribosomal protein L1 LIT28_00610 IPR023674 Ribosomal protein L1-like LIT28_00610 IPR005878 Ribosomal protein L1, bacterial-type LIT28_00615 IPR022973 Ribosomal protein L10 LIT28_00615 IPR002363 Ribosomal protein L10, eubacterial, conserved site LIT28_00615 IPR001790 Ribosomal protein L10P LIT28_00620 IPR008932 Ribosomal protein L7/L12, oligomerisation LIT28_00620 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily LIT28_00620 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LIT28_00620 IPR000206 Ribosomal protein L7/L12 LIT28_00620 IPR013823 Ribosomal protein L7/L12, C-terminal LIT28_00625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_00625 IPR007848 Methyltransferase small domain LIT28_00630 IPR014724 RNA polymerase Rpb2, OB-fold LIT28_00630 IPR007641 RNA polymerase Rpb2, domain 7 LIT28_00630 IPR007645 RNA polymerase Rpb2, domain 3 LIT28_00630 IPR037034 RNA polymerase Rpb2, domain 2 superfamily LIT28_00630 IPR007642 RNA polymerase Rpb2, domain 2 LIT28_00630 IPR007121 RNA polymerase, beta subunit, conserved site LIT28_00630 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type LIT28_00630 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain LIT28_00630 IPR015712 DNA-directed RNA polymerase, subunit 2 LIT28_00630 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily LIT28_00630 IPR007644 RNA polymerase, beta subunit, protrusion LIT28_00630 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain LIT28_00630 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily LIT28_00635 IPR007081 RNA polymerase Rpb1, domain 5 LIT28_00635 IPR038120 RNA polymerase Rpb1, funnel domain superfamily LIT28_00635 IPR007083 RNA polymerase Rpb1, domain 4 LIT28_00635 IPR042102 RNA polymerase Rpb1, domain 3 superfamily LIT28_00635 IPR007066 RNA polymerase Rpb1, domain 3 LIT28_00635 IPR007080 RNA polymerase Rpb1, domain 1 LIT28_00635 IPR006592 RNA polymerase, N-terminal LIT28_00635 IPR000722 RNA polymerase, alpha subunit LIT28_00635 IPR012754 DNA-directed RNA polymerase, subunit beta-prime LIT28_00640 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 LIT28_00640 IPR029064 50S ribosomal protein L30e-like LIT28_00640 IPR000948 Ribosomal protein L7Ae, prokaryotes LIT28_00640 IPR023460 Ribosomal protein L7Ae, putative LIT28_00645 IPR012340 Nucleic acid-binding, OB-fold LIT28_00645 IPR006032 Ribosomal protein S12/S23 LIT28_00645 IPR005679 Ribosomal protein S12, bacterial-type LIT28_00650 IPR005717 Ribosomal protein S7, bacterial/organellar-type LIT28_00650 IPR000235 Ribosomal protein S5/S7 LIT28_00650 IPR020606 Ribosomal protein S7, conserved site LIT28_00650 IPR023798 Ribosomal protein S7 domain LIT28_00650 IPR036823 Ribosomal protein S7 domain superfamily LIT28_00655 IPR005517 Translation elongation factor EFG/EF2, domain IV LIT28_00655 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_00655 IPR041095 Elongation Factor G, domain II LIT28_00655 IPR000795 Transcription factor, GTP-binding domain LIT28_00655 IPR004540 Translation elongation factor EFG/EF2 LIT28_00655 IPR005225 Small GTP-binding protein domain LIT28_00655 IPR009022 Elongation factor G, domain III LIT28_00655 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_00655 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_00655 IPR035647 EF-G domain III/V-like LIT28_00655 IPR031157 Tr-type G domain, conserved site LIT28_00655 IPR004161 Translation elongation factor EFTu-like, domain 2 LIT28_00655 IPR000640 Elongation factor EFG, domain V-like LIT28_00655 IPR035649 EFG, domain V LIT28_00655 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00660 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain LIT28_00660 IPR033720 Elongation factor Tu, domain 2 LIT28_00660 IPR031157 Tr-type G domain, conserved site LIT28_00660 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00660 IPR005225 Small GTP-binding protein domain LIT28_00660 IPR000795 Transcription factor, GTP-binding domain LIT28_00660 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_00660 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LIT28_00660 IPR004161 Translation elongation factor EFTu-like, domain 2 LIT28_00660 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LIT28_00660 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle LIT28_00665 IPR027486 Ribosomal protein S10 domain LIT28_00665 IPR001848 Ribosomal protein S10 LIT28_00665 IPR036838 Ribosomal protein S10 domain superfamily LIT28_00665 IPR018268 Ribosomal protein S10, conserved site LIT28_00670 IPR019927 Ribosomal protein L3, bacterial/organelle-type LIT28_00670 IPR019926 Ribosomal protein L3, conserved site LIT28_00670 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_00670 IPR000597 Ribosomal protein L3 LIT28_00675 IPR002136 Ribosomal protein L4/L1e LIT28_00675 IPR023574 Ribosomal protein L4 domain superfamily LIT28_00675 IPR013005 50S ribosomal protein uL4 LIT28_00680 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LIT28_00680 IPR012678 Ribosomal protein L23/L15e core domain superfamily LIT28_00680 IPR001014 Ribosomal protein L23/L25, conserved site LIT28_00680 IPR013025 Ribosomal protein L25/L23 LIT28_00685 IPR012340 Nucleic acid-binding, OB-fold LIT28_00685 IPR022666 Ribosomal Proteins L2, RNA binding domain LIT28_00685 IPR002171 Ribosomal protein L2 LIT28_00685 IPR005880 Ribosomal protein L2, bacterial/organellar-type LIT28_00685 IPR022669 Ribosomal protein L2, C-terminal LIT28_00685 IPR022671 Ribosomal protein L2, conserved site LIT28_00685 IPR014726 Ribosomal protein L2, domain 3 LIT28_00685 IPR008991 Translation protein SH3-like domain superfamily LIT28_00685 IPR014722 Ribosomal protein L2, domain 2 LIT28_00690 IPR002222 Ribosomal protein S19/S15 LIT28_00690 IPR005732 Ribosomal protein S19, bacterial-type LIT28_00690 IPR020934 Ribosomal protein S19 conserved site LIT28_00690 IPR023575 Ribosomal protein S19, superfamily LIT28_00695 IPR001063 Ribosomal protein L22/L17 LIT28_00695 IPR018260 Ribosomal protein L22/L17, conserved site LIT28_00695 IPR036394 Ribosomal protein L22/L17 superfamily LIT28_00695 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type LIT28_00700 IPR036419 Ribosomal protein S3, C-terminal domain superfamily LIT28_00700 IPR004044 K Homology domain, type 2 LIT28_00700 IPR004087 K Homology domain LIT28_00700 IPR018280 Ribosomal protein S3, conserved site LIT28_00700 IPR015946 K homology domain-like, alpha/beta LIT28_00700 IPR005704 Ribosomal protein S3, bacterial-type LIT28_00700 IPR009019 K homology domain superfamily, prokaryotic type LIT28_00700 IPR001351 Ribosomal protein S3, C-terminal LIT28_00705 IPR016180 Ribosomal protein L10e/L16 LIT28_00705 IPR036920 Ribosomal protein L10e/L16 superfamily LIT28_00705 IPR000114 Ribosomal protein L16 LIT28_00705 IPR020798 Ribosomal protein L16, conserved site LIT28_00710 IPR001854 Ribosomal protein L29/L35 LIT28_00710 IPR036049 Ribosomal protein L29/L35 superfamily LIT28_00710 IPR018254 Ribosomal protein L29, conserved site LIT28_00715 IPR012340 Nucleic acid-binding, OB-fold LIT28_00715 IPR019984 30S ribosomal protein S17 LIT28_00715 IPR000266 Ribosomal protein S17/S11 LIT28_00715 IPR019979 Ribosomal protein S17, conserved site LIT28_00720 IPR019972 Ribosomal protein L14P, conserved site LIT28_00720 IPR005745 Ribosomal protein L14P, bacterial-type LIT28_00720 IPR000218 Ribosomal protein L14P LIT28_00720 IPR036853 Ribosomal protein L14 superfamily LIT28_00725 IPR005824 KOW LIT28_00725 IPR041988 Ribosomal Protein L26/L24, KOW domain LIT28_00725 IPR014722 Ribosomal protein L2, domain 2 LIT28_00725 IPR003256 Ribosomal protein L24 LIT28_00725 IPR005825 Ribosomal protein L24/L26, conserved site LIT28_00725 IPR008991 Translation protein SH3-like domain superfamily LIT28_00730 IPR002132 Ribosomal protein L5 LIT28_00730 IPR020930 Ribosomal protein L5, bacterial-type LIT28_00730 IPR031309 Ribosomal protein L5, C-terminal LIT28_00730 IPR020929 Ribosomal protein L5, conserved site LIT28_00730 IPR031310 Ribosomal protein L5, N-terminal LIT28_00730 IPR022803 Ribosomal protein L5 domain superfamily LIT28_00735 IPR001209 Ribosomal protein S14 LIT28_00735 IPR018271 Ribosomal protein S14, conserved site LIT28_00735 IPR023053 Ribosomal protein S14, type Z LIT28_00740 IPR000630 Ribosomal protein S8 LIT28_00740 IPR035987 Ribosomal protein S8 superfamily LIT28_00745 IPR000702 Ribosomal protein L6 LIT28_00745 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily LIT28_00745 IPR019906 Ribosomal protein L6, bacterial-type LIT28_00745 IPR002358 Ribosomal protein L6, conserved site LIT28_00745 IPR020040 Ribosomal protein L6, alpha-beta domain LIT28_00750 IPR005484 Ribosomal protein L18 LIT28_00750 IPR004389 Ribosomal protein L18, bacterial-type LIT28_00755 IPR000851 Ribosomal protein S5 LIT28_00755 IPR005712 Ribosomal protein S5, bacterial-type LIT28_00755 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_00755 IPR013810 Ribosomal protein S5, N-terminal LIT28_00755 IPR018192 Ribosomal protein S5, N-terminal, conserved site LIT28_00755 IPR005324 Ribosomal protein S5, C-terminal LIT28_00755 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_00760 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily LIT28_00760 IPR005996 Ribosomal protein L30, bacterial-type LIT28_00760 IPR018038 Ribosomal protein L30, conserved site LIT28_00760 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LIT28_00765 IPR021131 Ribosomal protein L18e/L15P LIT28_00765 IPR036227 Ribosomal L18e/L15P superfamily LIT28_00765 IPR030878 Ribosomal protein L15 LIT28_00765 IPR005749 Ribosomal protein L15, bacterial-type LIT28_00765 IPR001196 Ribosomal protein L15, conserved site LIT28_00770 IPR002208 SecY/SEC61-alpha family LIT28_00770 IPR030659 SecY conserved site LIT28_00770 IPR026593 Protein translocase subunit SecY LIT28_00770 IPR023201 SecY domain superfamily LIT28_00775 IPR006259 Adenylate kinase subfamily LIT28_00775 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00775 IPR007862 Adenylate kinase, active site lid domain LIT28_00775 IPR000850 Adenylate kinase/UMP-CMP kinase LIT28_00775 IPR033690 Adenylate kinase, conserved site LIT28_00780 IPR036005 Creatinase/aminopeptidase-like LIT28_00780 IPR000994 Peptidase M24 LIT28_00780 IPR001714 Peptidase M24, methionine aminopeptidase LIT28_00780 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 LIT28_00785 IPR012340 Nucleic acid-binding, OB-fold LIT28_00785 IPR006196 RNA-binding domain, S1, IF1 type LIT28_00785 IPR022967 RNA-binding domain, S1 LIT28_00785 IPR004368 Translation initiation factor IF-1 LIT28_00790 IPR000473 Ribosomal protein L36 LIT28_00790 IPR035977 Ribosomal protein L36 superfamily LIT28_00795 IPR018269 Ribosomal protein S13, conserved site LIT28_00795 IPR010979 Ribosomal protein S13-like, H2TH LIT28_00795 IPR001892 Ribosomal protein S13 LIT28_00795 IPR019980 Ribosomal protein S13, bacterial-type LIT28_00795 IPR027437 30s ribosomal protein S13, C-terminal LIT28_00800 IPR001971 Ribosomal protein S11 LIT28_00800 IPR019981 Ribosomal protein S11, bacterial-type LIT28_00800 IPR018102 Ribosomal S11, conserved site LIT28_00800 IPR036967 Ribosomal protein S11 superfamily LIT28_00805 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type LIT28_00805 IPR011773 DNA-directed RNA polymerase, alpha subunit LIT28_00805 IPR036603 RNA polymerase, RBP11-like subunit LIT28_00805 IPR011260 RNA polymerase, alpha subunit, C-terminal LIT28_00805 IPR036643 DNA-directed RNA polymerase, insert domain superfamily LIT28_00805 IPR011262 DNA-directed RNA polymerase, insert domain LIT28_00810 IPR036373 Ribosomal protein L17 superfamily LIT28_00810 IPR000456 Ribosomal protein L17 LIT28_00815 IPR017871 ABC transporter, conserved site LIT28_00815 IPR003439 ABC transporter-like LIT28_00815 IPR003593 AAA+ ATPase domain LIT28_00815 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00815 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 LIT28_00815 IPR015856 ABC transporter, CbiO/EcfA subunit LIT28_00820 IPR003593 AAA+ ATPase domain LIT28_00820 IPR003439 ABC transporter-like LIT28_00820 IPR017871 ABC transporter, conserved site LIT28_00820 IPR015856 ABC transporter, CbiO/EcfA subunit LIT28_00820 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 LIT28_00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00825 IPR003339 ABC/ECF transporter, transmembrane component LIT28_00825 IPR024919 ECF transporter transmembrane protein EcfT LIT28_00830 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain LIT28_00830 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_00830 IPR001406 Pseudouridine synthase I, TruA LIT28_00830 IPR020095 Pseudouridine synthase I, TruA, C-terminal LIT28_00835 IPR005822 Ribosomal protein L13 LIT28_00835 IPR023563 Ribosomal protein L13, conserved site LIT28_00835 IPR036899 Ribosomal protein L13 superfamily LIT28_00835 IPR005823 Ribosomal protein L13, bacterial-type LIT28_00840 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_00840 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_00840 IPR000754 Ribosomal protein S9 LIT28_00840 IPR023035 Ribosomal protein S9, bacterial/plastid LIT28_00840 IPR020574 Ribosomal protein S9, conserved site LIT28_00850 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD LIT28_00850 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LIT28_00855 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_00855 IPR000808 Mrp, conserved site LIT28_00855 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 LIT28_00855 IPR019591 Mrp/NBP35 ATP-binding protein LIT28_00860 IPR041262 Spore germination GerD, central core domain LIT28_00865 IPR024164 KinB-signalling pathway activation protein LIT28_00870 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_00870 IPR002509 NodB homology domain LIT28_00870 IPR014132 Sporulation polysaccharide deacetylase, PdaB LIT28_00940 IPR036129 Glycerate kinase superfamily LIT28_00940 IPR018197 Glycerate kinase, restriction-enzyme-like fold LIT28_00940 IPR004381 Glycerate kinase LIT28_00940 IPR018193 Glycerate kinase, flavodoxin-like fold LIT28_00945 IPR014033 Arginase LIT28_00945 IPR006035 Ureohydrolase LIT28_00945 IPR020855 Ureohydrolase, manganese-binding site LIT28_00945 IPR023696 Ureohydrolase domain superfamily LIT28_00950 IPR003390 DNA integrity scanning protein, DisA, N-terminal LIT28_00950 IPR034701 Diadenylate cyclase CdaA LIT28_00950 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily LIT28_00950 IPR014046 Diadenylate cyclase LIT28_00955 IPR012505 YbbR-like LIT28_00960 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III LIT28_00960 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II LIT28_00960 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III LIT28_00960 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I LIT28_00960 IPR005843 Alpha-D-phosphohexomutase, C-terminal LIT28_00960 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily LIT28_00960 IPR016066 Alpha-D-phosphohexomutase, conserved site LIT28_00960 IPR005841 Alpha-D-phosphohexomutase superfamily LIT28_00960 IPR006352 Phosphoglucosamine mutase, bacterial type LIT28_00970 IPR017932 Glutamine amidotransferase type 2 domain LIT28_00970 IPR035466 GlmS/AgaS, SIS domain 1 LIT28_00970 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising LIT28_00970 IPR029055 Nucleophile aminohydrolases, N-terminal LIT28_00970 IPR001347 Sugar isomerase (SIS) LIT28_00970 IPR035490 GlmS/FrlB, SIS domain 2 LIT28_00975 IPR011042 Six-bladed beta-propeller, TolB-like LIT28_00975 IPR029058 Alpha/Beta hydrolase fold LIT28_00975 IPR011659 WD40-like Beta Propeller LIT28_00975 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain LIT28_00990 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_00990 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_00990 IPR036291 NAD(P)-binding domain superfamily LIT28_00995 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_00995 IPR035906 MetI-like superfamily LIT28_01000 IPR018449 NIL domain LIT28_01000 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain LIT28_01000 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal LIT28_01000 IPR017871 ABC transporter, conserved site LIT28_01000 IPR003439 ABC transporter-like LIT28_01000 IPR026253 Methionine import ATP-binding protein MetN LIT28_01000 IPR003593 AAA+ ATPase domain LIT28_01000 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01005 IPR004872 Lipoprotein NlpA family LIT28_01010 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_01010 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_01010 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LIT28_01010 IPR011032 GroES-like superfamily LIT28_01010 IPR036291 NAD(P)-binding domain superfamily LIT28_01010 IPR020843 Polyketide synthase, enoylreductase domain LIT28_01020 IPR016164 FAD-linked oxidase-like, C-terminal LIT28_01020 IPR006094 FAD linked oxidase, N-terminal LIT28_01020 IPR016169 FAD-binding, type PCMH, subdomain 2 LIT28_01020 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_01020 IPR016166 FAD-binding domain, PCMH-type LIT28_01025 IPR011701 Major facilitator superfamily LIT28_01025 IPR020846 Major facilitator superfamily domain LIT28_01025 IPR036259 MFS transporter superfamily LIT28_01035 IPR004812 Drug resistance transporter Bcr/CmlA subfamily LIT28_01035 IPR011701 Major facilitator superfamily LIT28_01035 IPR020846 Major facilitator superfamily domain LIT28_01035 IPR036259 MFS transporter superfamily LIT28_01055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_01055 IPR035906 MetI-like superfamily LIT28_01060 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_01060 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LIT28_01060 IPR035906 MetI-like superfamily LIT28_01065 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_01065 IPR003593 AAA+ ATPase domain LIT28_01065 IPR003439 ABC transporter-like LIT28_01065 IPR017871 ABC transporter, conserved site LIT28_01065 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01070 IPR003593 AAA+ ATPase domain LIT28_01070 IPR003439 ABC transporter-like LIT28_01070 IPR017871 ABC transporter, conserved site LIT28_01070 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_01070 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01075 IPR000914 Solute-binding protein family 5 domain LIT28_01075 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_01075 IPR023765 Solute-binding protein family 5, conserved site LIT28_01075 IPR039424 Solute-binding protein family 5 LIT28_01085 IPR018060 DNA binding HTH domain, AraC-type LIT28_01085 IPR008979 Galactose-binding-like domain superfamily LIT28_01085 IPR009057 Homeobox-like domain superfamily LIT28_01100 IPR000914 Solute-binding protein family 5 domain LIT28_01100 IPR023765 Solute-binding protein family 5, conserved site LIT28_01100 IPR039424 Solute-binding protein family 5 LIT28_01100 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_01105 IPR023765 Solute-binding protein family 5, conserved site LIT28_01105 IPR039424 Solute-binding protein family 5 LIT28_01105 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_01105 IPR000914 Solute-binding protein family 5 domain LIT28_01110 IPR020471 Aldo/keto reductase LIT28_01110 IPR018170 Aldo/keto reductase, conserved site LIT28_01110 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_01110 IPR023210 NADP-dependent oxidoreductase domain LIT28_01115 IPR000304 Pyrroline-5-carboxylate reductase LIT28_01115 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain LIT28_01115 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LIT28_01115 IPR036291 NAD(P)-binding domain superfamily LIT28_01115 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_01120 IPR010651 Sugar transport protein LIT28_01125 IPR011867 Molybdate ABC transporter, permease protein LIT28_01125 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_01125 IPR035906 MetI-like superfamily LIT28_01130 IPR041879 YvgL-like, substrate binding domain LIT28_01130 IPR005950 Molybdate ABC transporter, substrate-binding protein LIT28_01135 IPR009061 Putative DNA-binding domain superfamily LIT28_01135 IPR010093 SinI-like, DNA-binding domain LIT28_01135 IPR024370 PBP domain LIT28_01135 IPR041657 Helix-turn-helix domain, group 17 LIT28_01145 IPR000847 Transcription regulator HTH, LysR LIT28_01145 IPR036390 Winged helix DNA-binding domain superfamily LIT28_01145 IPR005119 LysR, substrate-binding LIT28_01145 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_01150 IPR000620 EamA domain LIT28_01155 IPR025417 YrzO-like protein LIT28_01165 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase LIT28_01165 IPR002123 Phospholipid/glycerol acyltransferase LIT28_01175 IPR000843 LacI-type HTH domain LIT28_01175 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_01175 IPR001761 Periplasmic binding protein/LacI sugar binding domain LIT28_01175 IPR028082 Periplasmic binding protein-like I LIT28_01185 IPR019264 Domain of unknown function DUF2179 LIT28_01185 IPR003740 Uncharacterised membrane protein YitT LIT28_01185 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_01205 IPR018763 Protein of unknown function DUF2334 LIT28_01230 IPR003593 AAA+ ATPase domain LIT28_01230 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LIT28_01230 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01230 IPR017871 ABC transporter, conserved site LIT28_01230 IPR003439 ABC transporter-like LIT28_01230 IPR032781 ABC-transporter extension domain LIT28_01230 IPR032524 ABC transporter Uup, C-terminal LIT28_01240 IPR023765 Solute-binding protein family 5, conserved site LIT28_01240 IPR000914 Solute-binding protein family 5 domain LIT28_01240 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_01240 IPR039424 Solute-binding protein family 5 LIT28_01245 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_01245 IPR023765 Solute-binding protein family 5, conserved site LIT28_01245 IPR011980 Nickel ABC transporter, substrate-binding protein NikA LIT28_01245 IPR000914 Solute-binding protein family 5 domain LIT28_01245 IPR039424 Solute-binding protein family 5 LIT28_01250 IPR035906 MetI-like superfamily LIT28_01250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_01255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_01255 IPR035906 MetI-like superfamily LIT28_01255 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LIT28_01260 IPR017871 ABC transporter, conserved site LIT28_01260 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_01260 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01260 IPR003439 ABC transporter-like LIT28_01260 IPR003593 AAA+ ATPase domain LIT28_01265 IPR003439 ABC transporter-like LIT28_01265 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01265 IPR003593 AAA+ ATPase domain LIT28_01265 IPR017871 ABC transporter, conserved site LIT28_01265 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_01270 IPR036412 HAD-like superfamily LIT28_01270 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_01270 IPR000150 Cof family LIT28_01270 IPR023214 HAD superfamily LIT28_01300 IPR005956 4-hydroxyphenylpyruvate dioxygenase LIT28_01300 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal LIT28_01300 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal LIT28_01300 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_01300 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_01300 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_01305 IPR011234 Fumarylacetoacetase-like, C-terminal LIT28_01305 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily LIT28_01315 IPR002293 Amino acid/polyamine transporter I LIT28_01320 IPR011701 Major facilitator superfamily LIT28_01320 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIT28_01320 IPR005829 Sugar transporter, conserved site LIT28_01320 IPR036259 MFS transporter superfamily LIT28_01320 IPR020846 Major facilitator superfamily domain LIT28_01325 IPR016185 Pre-ATP-grasp domain superfamily LIT28_01325 IPR011127 D-alanine--D-alanine ligase, N-terminal domain LIT28_01325 IPR011095 D-alanine--D-alanine ligase, C-terminal LIT28_01325 IPR005905 D-alanine--D-alanine ligase LIT28_01325 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site LIT28_01325 IPR013815 ATP-grasp fold, subdomain 1 LIT28_01325 IPR011761 ATP-grasp fold LIT28_01330 IPR035911 MurE/MurF, N-terminal LIT28_01330 IPR000713 Mur ligase, N-terminal catalytic domain LIT28_01330 IPR036565 Mur-like, catalytic domain superfamily LIT28_01330 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase LIT28_01330 IPR004101 Mur ligase, C-terminal LIT28_01330 IPR013221 Mur ligase, central LIT28_01330 IPR036615 Mur ligase, C-terminal domain superfamily LIT28_01335 IPR011545 DEAD/DEAH box helicase domain LIT28_01335 IPR030880 DEAD-box ATP-dependent RNA helicase CshA LIT28_01335 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_01335 IPR001650 Helicase, C-terminal LIT28_01335 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01335 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LIT28_01335 IPR014014 RNA helicase, DEAD-box type, Q motif LIT28_01340 IPR004601 UV-endonuclease UvdE LIT28_01340 IPR023520 UV-endonuclease UvdE, bacterial LIT28_01340 IPR036237 Xylose isomerase-like superfamily LIT28_01345 IPR022764 Peptidase S54, rhomboid domain LIT28_01345 IPR035952 Rhomboid-like superfamily LIT28_01350 IPR004568 Phosphopantetheine-protein transferase domain LIT28_01350 IPR002582 Holo-[acyl carrier protein] synthase LIT28_01350 IPR008278 4'-phosphopantetheinyl transferase domain LIT28_01350 IPR037143 4'-phosphopantetheinyl transferase domain superfamily LIT28_01355 IPR029046 Lipoprotein localisation LolA/LolB/LppX LIT28_01360 IPR000821 Alanine racemase LIT28_01360 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LIT28_01360 IPR011079 Alanine racemase, C-terminal LIT28_01360 IPR001608 Alanine racemase, N-terminal LIT28_01360 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site LIT28_01360 IPR029066 PLP-binding barrel LIT28_01365 IPR013321 Arc-type ribbon-helix-helix LIT28_01365 IPR002145 Ribbon-helix-helix protein, CopG LIT28_01365 IPR010985 Ribbon-helix-helix LIT28_01370 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor LIT28_01370 IPR003477 mRNA interferase PemK-like LIT28_01375 IPR006641 YqgF/RNase H-like domain LIT28_01375 IPR037027 YqgF/RNase H-like domain superfamily LIT28_01375 IPR018974 Tex-like protein, N-terminal LIT28_01375 IPR023319 Tex-like protein, HTH domain superfamily LIT28_01375 IPR023323 Tex-like domain superfamily LIT28_01375 IPR032639 Tex protein, YqgF-like domain LIT28_01375 IPR022967 RNA-binding domain, S1 LIT28_01375 IPR010994 RuvA domain 2-like LIT28_01375 IPR012337 Ribonuclease H-like superfamily LIT28_01375 IPR012340 Nucleic acid-binding, OB-fold LIT28_01375 IPR041692 HHH domain 9 LIT28_01375 IPR003029 S1 domain LIT28_01385 IPR006640 SprT-like LIT28_01385 IPR035240 SprT-like, zinc ribbon domain LIT28_01385 IPR023524 Uncharacterised protein family SprT-like LIT28_01475 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01475 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE LIT28_01480 IPR000905 Gcp-like domain LIT28_01480 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB LIT28_01485 IPR016181 Acyl-CoA N-acyltransferase LIT28_01485 IPR006464 N-acetyltransferase RimI/Ard1 LIT28_01485 IPR000182 GNAT domain LIT28_01490 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD LIT28_01490 IPR017861 Kae1/TsaD family LIT28_01490 IPR000905 Gcp-like domain LIT28_01490 IPR017860 Peptidase M22, conserved site LIT28_01495 IPR032781 ABC-transporter extension domain LIT28_01495 IPR003593 AAA+ ATPase domain LIT28_01495 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LIT28_01495 IPR032524 ABC transporter Uup, C-terminal LIT28_01495 IPR017871 ABC transporter, conserved site LIT28_01495 IPR003439 ABC transporter-like LIT28_01495 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01500 IPR009718 Rex DNA-binding, C-terminal domain LIT28_01500 IPR022876 Redox-sensing transcriptional repressor Rex LIT28_01500 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_01500 IPR036390 Winged helix DNA-binding domain superfamily LIT28_01500 IPR003781 CoA-binding LIT28_01500 IPR036291 NAD(P)-binding domain superfamily LIT28_01510 IPR003675 CAAX prenyl protease 2 LIT28_01515 IPR011032 GroES-like superfamily LIT28_01515 IPR037124 GroES chaperonin superfamily LIT28_01515 IPR020818 GroES chaperonin family LIT28_01515 IPR018369 Chaperonin GroES, conserved site LIT28_01520 IPR001844 Chaperonin Cpn60 LIT28_01520 IPR002423 Chaperonin Cpn60/TCP-1 family LIT28_01520 IPR027409 GroEL-like apical domain superfamily LIT28_01520 IPR027413 GroEL-like equatorial domain superfamily LIT28_01520 IPR027410 TCP-1-like chaperonin intermediate domain superfamily LIT28_01520 IPR018370 Chaperonin Cpn60, conserved site LIT28_01525 IPR025777 GMP synthetase ATP pyrophosphatase domain LIT28_01525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_01525 IPR022310 NAD/GMP synthase LIT28_01525 IPR022955 GMP synthase LIT28_01525 IPR001674 GMP synthase, C-terminal LIT28_01525 IPR004739 GMP synthase, glutamine amidotransferase LIT28_01525 IPR017926 Glutamine amidotransferase LIT28_01525 IPR029062 Class I glutamine amidotransferase-like LIT28_01530 IPR026033 Azaguanine-like transporters LIT28_01530 IPR006043 Xanthine/uracil/vitamin C permease LIT28_01535 IPR011006 CheY-like superfamily LIT28_01535 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_01535 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_01535 IPR001789 Signal transduction response regulator, receiver domain LIT28_01535 IPR039420 Transcriptional regulatory protein WalR-like LIT28_01535 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_01540 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_01540 IPR031967 PhoR, single Cache-like domain LIT28_01540 IPR013767 PAS fold LIT28_01540 IPR035965 PAS domain superfamily LIT28_01540 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_01540 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_01540 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_01540 IPR005467 Histidine kinase domain LIT28_01540 IPR000014 PAS domain LIT28_01540 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_01565 IPR036249 Thioredoxin-like superfamily LIT28_01565 IPR001853 DSBA-like thioredoxin domain LIT28_01585 IPR007739 Rhamnan synthesis F LIT28_01585 IPR032719 Glycosyltransferase WbsX LIT28_01595 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LIT28_01595 IPR013216 Methyltransferase type 11 LIT28_01595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_01615 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_01615 IPR001173 Glycosyltransferase 2-like LIT28_01635 IPR003824 Undecaprenyl-diphosphatase UppP LIT28_01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01645 IPR017871 ABC transporter, conserved site LIT28_01645 IPR003593 AAA+ ATPase domain LIT28_01645 IPR003439 ABC transporter-like LIT28_01650 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_01650 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_01650 IPR005467 Histidine kinase domain LIT28_01650 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_01650 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_01650 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_01655 IPR039420 Transcriptional regulatory protein WalR-like LIT28_01655 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_01655 IPR001789 Signal transduction response regulator, receiver domain LIT28_01655 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_01655 IPR011006 CheY-like superfamily LIT28_01655 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_01675 IPR000620 EamA domain LIT28_01705 IPR000031 PurE domain LIT28_01705 IPR035893 PurE domain superfamily LIT28_01705 IPR024694 PurE, prokaryotic type LIT28_01705 IPR033747 Class I PurE LIT28_01710 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit LIT28_01710 IPR011054 Rudiment single hybrid motif LIT28_01710 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain LIT28_01710 IPR016185 Pre-ATP-grasp domain superfamily LIT28_01710 IPR013815 ATP-grasp fold, subdomain 1 LIT28_01710 IPR011761 ATP-grasp fold LIT28_01710 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LIT28_01715 IPR004769 Adenylosuccinate lyase LIT28_01715 IPR008948 L-Aspartase-like LIT28_01715 IPR022761 Fumarate lyase, N-terminal LIT28_01715 IPR020557 Fumarate lyase, conserved site LIT28_01715 IPR024083 Fumarase/histidase, N-terminal LIT28_01715 IPR019468 Adenylosuccinate lyase C-terminal LIT28_01715 IPR000362 Fumarate lyase family LIT28_01720 IPR018236 SAICAR synthetase, conserved site LIT28_01720 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase LIT28_01720 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase LIT28_01720 IPR028923 SAICAR synthetase/ADE2, N-terminal LIT28_01725 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily LIT28_01725 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS LIT28_01730 IPR017926 Glutamine amidotransferase LIT28_01730 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ LIT28_01730 IPR029062 Class I glutamine amidotransferase-like LIT28_01735 IPR016188 PurM-like, N-terminal domain LIT28_01735 IPR036676 PurM-like, C-terminal domain superfamily LIT28_01735 IPR010918 PurM-like, C-terminal domain LIT28_01735 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain LIT28_01735 IPR010074 Phosphoribosylformylglycinamidine subunit PurL LIT28_01735 IPR036921 PurM-like, N-terminal domain superfamily LIT28_01740 IPR017932 Glutamine amidotransferase type 2 domain LIT28_01740 IPR029055 Nucleophile aminohydrolases, N-terminal LIT28_01740 IPR029057 Phosphoribosyltransferase-like LIT28_01740 IPR035584 Amidophosphoribosyltransferase, N-terminal LIT28_01740 IPR000836 Phosphoribosyltransferase domain LIT28_01740 IPR005854 Amidophosphoribosyltransferase LIT28_01745 IPR010918 PurM-like, C-terminal domain LIT28_01745 IPR036676 PurM-like, C-terminal domain superfamily LIT28_01745 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase LIT28_01745 IPR016188 PurM-like, N-terminal domain LIT28_01745 IPR036921 PurM-like, N-terminal domain superfamily LIT28_01750 IPR001555 Phosphoribosylglycinamide formyltransferase, active site LIT28_01750 IPR004607 Phosphoribosylglycinamide formyltransferase LIT28_01750 IPR036477 Formyl transferase, N-terminal domain superfamily LIT28_01750 IPR002376 Formyl transferase, N-terminal LIT28_01755 IPR011607 Methylglyoxal synthase-like domain LIT28_01755 IPR024051 AICAR transformylase, duplicated domain superfamily LIT28_01755 IPR016193 Cytidine deaminase-like LIT28_01755 IPR002695 Bifunctional purine biosynthesis protein PurH-like LIT28_01755 IPR036914 Methylglyoxal synthase-like domain superfamily LIT28_01760 IPR011054 Rudiment single hybrid motif LIT28_01760 IPR011761 ATP-grasp fold LIT28_01760 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal LIT28_01760 IPR020559 Phosphoribosylglycinamide synthetase, conserved site LIT28_01760 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily LIT28_01760 IPR020560 Phosphoribosylglycinamide synthetase, C-domain LIT28_01760 IPR000115 Phosphoribosylglycinamide synthetase LIT28_01760 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LIT28_01760 IPR016185 Pre-ATP-grasp domain superfamily LIT28_01760 IPR013815 ATP-grasp fold, subdomain 1 LIT28_01780 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase LIT28_01780 IPR038597 GGGP/HepGP synthase superfamily LIT28_01780 IPR039074 GGGP/HepGP synthase group I LIT28_01785 IPR005751 ATP-dependent DNA helicase PcrA LIT28_01785 IPR000212 DNA helicase, UvrD/REP type LIT28_01785 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01785 IPR014016 UvrD-like helicase, ATP-binding domain LIT28_01785 IPR034739 UvrD/AddA helicase, N-terminal LIT28_01785 IPR013986 DExx box DNA helicase domain superfamily LIT28_01785 IPR014017 UvrD-like DNA helicase, C-terminal LIT28_01790 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LIT28_01790 IPR001357 BRCT domain LIT28_01790 IPR036420 BRCT domain superfamily LIT28_01790 IPR041663 DisA/LigA, helix-hairpin-helix motif LIT28_01790 IPR010994 RuvA domain 2-like LIT28_01790 IPR018239 NAD-dependent DNA ligase, active site LIT28_01790 IPR033136 NAD-dependent DNA ligase, conserved site LIT28_01790 IPR004150 NAD-dependent DNA ligase, OB-fold LIT28_01790 IPR001679 NAD-dependent DNA ligase LIT28_01790 IPR013839 NAD-dependent DNA ligase, adenylation LIT28_01790 IPR013840 NAD-dependent DNA ligase, N-terminal LIT28_01790 IPR012340 Nucleic acid-binding, OB-fold LIT28_01790 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type LIT28_01795 IPR011426 CamS sex pheromone cAM373 LIT28_01800 IPR002781 Transmembrane protein TauE-like LIT28_01805 IPR005932 1-pyrroline-5-carboxylate dehydrogenase LIT28_01805 IPR015590 Aldehyde dehydrogenase domain LIT28_01805 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_01805 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_01805 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIT28_01805 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_01805 IPR016160 Aldehyde dehydrogenase, cysteine active site LIT28_01815 IPR036380 Isochorismatase-like superfamily LIT28_01815 IPR000868 Isochorismatase-like LIT28_01820 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal LIT28_01820 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain LIT28_01820 IPR018449 NIL domain LIT28_01820 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01820 IPR003593 AAA+ ATPase domain LIT28_01820 IPR026253 Methionine import ATP-binding protein MetN LIT28_01820 IPR017871 ABC transporter, conserved site LIT28_01820 IPR003439 ABC transporter-like LIT28_01825 IPR035906 MetI-like superfamily LIT28_01825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_01830 IPR004872 Lipoprotein NlpA family LIT28_01845 IPR040612 ArsA, HSP20-like domain LIT28_01845 IPR025723 Anion-transporting ATPase-like domain LIT28_01845 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01845 IPR016300 Arsenical pump ATPase, ArsA/GET3 LIT28_01845 IPR008978 HSP20-like chaperone LIT28_01850 IPR011991 ArsR-like helix-turn-helix domain LIT28_01850 IPR000835 MarR-type HTH domain LIT28_01850 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_01850 IPR036390 Winged helix DNA-binding domain superfamily LIT28_01855 IPR038972 Inner membrane protein YiaA-like LIT28_01855 IPR008024 YiaAB two helix LIT28_01860 IPR003837 Glu-tRNAGln amidotransferase C subunit LIT28_01860 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C LIT28_01865 IPR036928 Amidase signature (AS) superfamily LIT28_01865 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit LIT28_01865 IPR020556 Amidase, conserved site LIT28_01865 IPR023631 Amidase signature domain LIT28_01865 IPR000120 Amidase LIT28_01870 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 LIT28_01870 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site LIT28_01870 IPR018027 Asn/Gln amidotransferase LIT28_01870 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic LIT28_01870 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E LIT28_01870 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit LIT28_01870 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LIT28_01870 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 LIT28_01870 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like LIT28_01875 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily LIT28_01875 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal LIT28_01875 IPR005218 Diacylglycerol/lipid kinase LIT28_01875 IPR001206 Diacylglycerol kinase, catalytic domain LIT28_01880 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic LIT28_01880 IPR036412 HAD-like superfamily LIT28_01880 IPR006439 HAD hydrolase, subfamily IA LIT28_01880 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_01880 IPR023214 HAD superfamily LIT28_01880 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_01880 IPR037512 Phosphoglycolate phosphatase, prokaryotic LIT28_01885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_01885 IPR004632 4-aminobutyrate aminotransferase, bacterial LIT28_01885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_01885 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_01885 IPR005814 Aminotransferase class-III LIT28_01890 IPR002078 RNA polymerase sigma factor 54 interaction domain LIT28_01890 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_01890 IPR003593 AAA+ ATPase domain LIT28_01890 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LIT28_01890 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LIT28_01895 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_01895 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_01895 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_01895 IPR016160 Aldehyde dehydrogenase, cysteine active site LIT28_01895 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIT28_01895 IPR015590 Aldehyde dehydrogenase domain LIT28_01895 IPR010102 Succinate semialdehyde dehydrogenase LIT28_01900 IPR000390 Small multidrug resistance protein family LIT28_01905 IPR035097 Peptidase M29, N-terminal LIT28_01905 IPR000787 Peptidase M29 LIT28_01920 IPR008276 Concentrative nucleoside transporter LIT28_01920 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LIT28_01920 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LIT28_01920 IPR002668 Concentrative nucleoside transporter N-terminal domain LIT28_01920 IPR011657 Concentrative nucleoside transporter C-terminal domain LIT28_01925 IPR002792 TRAM domain LIT28_01925 IPR010280 (Uracil-5)-methyltransferase family LIT28_01925 IPR030390 RNA methyltransferase TrmA, active site LIT28_01925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_01925 IPR030391 RNA methyltransferase TrmA, conserved site LIT28_01925 IPR012340 Nucleic acid-binding, OB-fold LIT28_01925 IPR030382 SAM-dependent methyltransferase TRM5/TYW2-type LIT28_01930 IPR018517 tRNA-dihydrouridine synthase, conserved site LIT28_01930 IPR013785 Aldolase-type TIM barrel LIT28_01930 IPR035587 DUS-like, FMN-binding domain LIT28_01930 IPR001269 tRNA-dihydrouridine synthase LIT28_01935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_01935 IPR013767 PAS fold LIT28_01935 IPR035965 PAS domain superfamily LIT28_01935 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_01935 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_01935 IPR005467 Histidine kinase domain LIT28_01935 IPR000014 PAS domain LIT28_01935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_01935 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_01940 IPR009921 Domain of unknown function DUF1456 LIT28_01955 IPR034603 Dipeptide epimerase LIT28_01955 IPR036849 Enolase-like, C-terminal domain superfamily LIT28_01955 IPR029017 Enolase-like, N-terminal LIT28_01955 IPR029065 Enolase C-terminal domain-like LIT28_01955 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LIT28_01955 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LIT28_01965 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LIT28_01965 IPR004770 Na+/H+ antiporter NhaC LIT28_01970 IPR011650 Peptidase M20, dimerisation domain LIT28_01970 IPR002933 Peptidase M20 LIT28_01970 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_01970 IPR017439 Amidohydrolase LIT28_01970 IPR037484 AmhX-like LIT28_01980 IPR012336 Thioredoxin-like fold LIT28_01980 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site LIT28_01980 IPR002109 Glutaredoxin LIT28_01980 IPR023753 FAD/NAD(P)-binding domain LIT28_01980 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_01980 IPR012081 Alkyl hydroperoxide reductase subunit F LIT28_01980 IPR036249 Thioredoxin-like superfamily LIT28_01985 IPR017559 Alkyl hydroperoxide reductase subunit C LIT28_01985 IPR036249 Thioredoxin-like superfamily LIT28_01985 IPR013766 Thioredoxin domain LIT28_01985 IPR024706 Peroxiredoxin, AhpC-type LIT28_01985 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIT28_01990 IPR002575 Aminoglycoside phosphotransferase LIT28_01990 IPR011009 Protein kinase-like domain superfamily LIT28_01990 IPR009212 Methylthioribose kinase LIT28_01995 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal LIT28_01995 IPR011559 Initiation factor 2B alpha/beta/delta LIT28_01995 IPR005251 Methylthioribose-1-phosphate isomerase LIT28_01995 IPR000649 Initiation factor 2B-related LIT28_01995 IPR037171 NagB/RpiA transferase-like LIT28_02000 IPR001303 Class II aldolase/adducin N-terminal LIT28_02000 IPR036409 Class II aldolase/adducin N-terminal domain superfamily LIT28_02005 IPR037294 ABC transporter, BtuC-like LIT28_02005 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_02010 IPR037294 ABC transporter, BtuC-like LIT28_02010 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_02015 IPR002491 ABC transporter periplasmic binding domain LIT28_02020 IPR022890 Ferredoxin--NADP reductase, type 2 LIT28_02020 IPR023753 FAD/NAD(P)-binding domain LIT28_02020 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_02030 IPR041657 Helix-turn-helix domain, group 17 LIT28_02030 IPR010093 SinI-like, DNA-binding domain LIT28_02075 IPR018775 RNA repair pathway DNA polymerase beta LIT28_02085 IPR036397 Ribonuclease H superfamily LIT28_02085 IPR012337 Ribonuclease H-like superfamily LIT28_02085 IPR001584 Integrase, catalytic core LIT28_02085 IPR038965 Transposase InsF-like LIT28_02085 IPR025948 HTH-like domain LIT28_02090 IPR036259 MFS transporter superfamily LIT28_02090 IPR020846 Major facilitator superfamily domain LIT28_02090 IPR005829 Sugar transporter, conserved site LIT28_02090 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family LIT28_02090 IPR011701 Major facilitator superfamily LIT28_02095 IPR038010 YhfW, C-terminal Rieske domain LIT28_02095 IPR005805 Rieske iron-sulphur protein, C-terminal LIT28_02095 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LIT28_02095 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LIT28_02095 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_02095 IPR006076 FAD dependent oxidoreductase LIT28_02105 IPR035906 MetI-like superfamily LIT28_02105 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_02105 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LIT28_02110 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LIT28_02110 IPR018313 Solute-binding protein family 3, conserved site LIT28_02115 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LIT28_02115 IPR003439 ABC transporter-like LIT28_02115 IPR017871 ABC transporter, conserved site LIT28_02115 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_02115 IPR003593 AAA+ ATPase domain LIT28_02120 IPR003660 HAMP domain LIT28_02120 IPR029151 Periplasmic sensor-like domain superfamily LIT28_02120 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_02120 IPR033479 Double Cache domain 1 LIT28_02125 IPR016166 FAD-binding domain, PCMH-type LIT28_02125 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_02125 IPR016167 FAD-binding, type PCMH, subdomain 1 LIT28_02125 IPR006094 FAD linked oxidase, N-terminal LIT28_02125 IPR012951 Berberine/berberine-like LIT28_02130 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LIT28_02130 IPR013780 Glycosyl hydrolase, all-beta LIT28_02130 IPR017853 Glycoside hydrolase superfamily LIT28_02130 IPR032091 Maltogenic Amylase, C-terminal LIT28_02135 IPR011300 Phosphotransferase system, IIBC component LIT28_02135 IPR001996 Phosphotransferase system, IIB component, type 1 LIT28_02135 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LIT28_02135 IPR003352 Phosphotransferase system, EIIC LIT28_02135 IPR013013 Phosphotransferase system, EIIC component, type 1 LIT28_02135 IPR011055 Duplicated hybrid motif LIT28_02135 IPR036878 Glucose permease domain IIB LIT28_02135 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LIT28_02140 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LIT28_02140 IPR005135 Endonuclease/exonuclease/phosphatase LIT28_02145 IPR013525 ABC-2 type transporter LIT28_02145 IPR017501 Phage infection protein, YhgE, C-terminal LIT28_02145 IPR017500 Phage infection protein, YhgE, N-terminal LIT28_02150 IPR034144 DNA topoisomerase 3-like, TOPRIM domain LIT28_02150 IPR005738 DNA topoisomerase III LIT28_02150 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LIT28_02150 IPR006171 TOPRIM domain LIT28_02150 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LIT28_02150 IPR003601 DNA topoisomerase, type IA, domain 2 LIT28_02150 IPR000380 DNA topoisomerase, type IA LIT28_02150 IPR023406 DNA topoisomerase, type IA, active site LIT28_02150 IPR023405 DNA topoisomerase, type IA, core domain LIT28_02150 IPR013497 DNA topoisomerase, type IA, central LIT28_02150 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LIT28_02150 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LIT28_02155 IPR000417 Hydroxyethylthiazole kinase LIT28_02155 IPR029056 Ribokinase-like LIT28_02160 IPR022998 Thiamine phosphate synthase/TenI LIT28_02160 IPR036206 Thiamin phosphate synthase superfamily LIT28_02160 IPR013785 Aldolase-type TIM barrel LIT28_02160 IPR034291 Thiamine phosphate synthase LIT28_02165 IPR004668 Anaerobic c4-dicarboxylate membrane transporter LIT28_02170 IPR004090 Chemotaxis methyl-accepting receptor LIT28_02170 IPR003660 HAMP domain LIT28_02170 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_02175 IPR029756 MTH1187/YkoF-like LIT28_02175 IPR002767 Thiamine-binding protein LIT28_02180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_02180 IPR035906 MetI-like superfamily LIT28_02190 IPR003439 ABC transporter-like LIT28_02190 IPR017871 ABC transporter, conserved site LIT28_02190 IPR003593 AAA+ ATPase domain LIT28_02190 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_02195 IPR003593 AAA+ ATPase domain LIT28_02195 IPR032781 ABC-transporter extension domain LIT28_02195 IPR003439 ABC transporter-like LIT28_02195 IPR017871 ABC transporter, conserved site LIT28_02195 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_02200 IPR017853 Glycoside hydrolase superfamily LIT28_02200 IPR013783 Immunoglobulin-like fold LIT28_02200 IPR001579 Glycoside hydrolase, chitinase active site LIT28_02200 IPR029070 Chitinase insertion domain superfamily LIT28_02200 IPR036116 Fibronectin type III superfamily LIT28_02200 IPR003610 Carbohydrate-binding module family 5/12 LIT28_02200 IPR001223 Glycoside hydrolase family 18, catalytic domain LIT28_02200 IPR036573 Carbohydrate-binding module superfamily 5/12 LIT28_02200 IPR003961 Fibronectin type III LIT28_02200 IPR011583 Chitinase II LIT28_02205 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain LIT28_02225 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_02225 IPR009057 Homeobox-like domain superfamily LIT28_02225 IPR001647 DNA-binding HTH domain, TetR-type LIT28_02225 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_02225 IPR013571 Transcription regulator QacR, C-terminal LIT28_02245 IPR036259 MFS transporter superfamily LIT28_02245 IPR024671 Autophagy-related protein 22-like LIT28_02245 IPR020846 Major facilitator superfamily domain LIT28_02260 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_02260 IPR004154 Anticodon-binding LIT28_02260 IPR036621 Anticodon-binding domain superfamily LIT28_02260 IPR002316 Proline-tRNA ligase, class IIa LIT28_02260 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type LIT28_02260 IPR016061 Proline-tRNA ligase, class II, C-terminal LIT28_02260 IPR017449 Prolyl-tRNA synthetase, class II LIT28_02260 IPR033721 Prolyl-tRNA synthetase, catalytic domain LIT28_02260 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIT28_02270 IPR000600 ROK family LIT28_02275 IPR003325 TerD domain LIT28_02280 IPR003325 TerD domain LIT28_02285 IPR003325 TerD domain LIT28_02290 IPR022493 Integral membrane YkoY LIT28_02290 IPR005496 Integral membrane protein TerC LIT28_02295 IPR025647 Putative component of 'biosynthetic module' LIT28_02300 IPR008863 Toxic anion resistance LIT28_02305 IPR023299 P-type ATPase, cytoplasmic domain N LIT28_02305 IPR006068 Cation-transporting P-type ATPase, C-terminal LIT28_02305 IPR001757 P-type ATPase LIT28_02305 IPR023214 HAD superfamily LIT28_02305 IPR004014 Cation-transporting P-type ATPase, N-terminal LIT28_02305 IPR008250 P-type ATPase, A domain superfamily LIT28_02305 IPR023298 P-type ATPase, transmembrane domain superfamily LIT28_02305 IPR018303 P-type ATPase, phosphorylation site LIT28_02305 IPR036412 HAD-like superfamily LIT28_02310 IPR009507 Protein of unknown function UPF0435 LIT28_02315 IPR023485 Phosphotyrosine protein phosphatase I LIT28_02315 IPR036196 Phosphotyrosine protein phosphatase I superfamily LIT28_02315 IPR017867 Protein-tyrosine phosphatase, low molecular weight LIT28_02325 IPR017039 Virulence factor BrkB LIT28_02330 IPR001757 P-type ATPase LIT28_02330 IPR027256 P-type ATPase, subfamily IB LIT28_02330 IPR023214 HAD superfamily LIT28_02330 IPR036412 HAD-like superfamily LIT28_02330 IPR018303 P-type ATPase, phosphorylation site LIT28_02330 IPR023299 P-type ATPase, cytoplasmic domain N LIT28_02330 IPR008250 P-type ATPase, A domain superfamily LIT28_02330 IPR023298 P-type ATPase, transmembrane domain superfamily LIT28_02335 IPR000620 EamA domain LIT28_02355 IPR032816 SNARE associated Golgi protein LIT28_02370 IPR012349 FMN-binding split barrel LIT28_02370 IPR038725 General stress protein, FMN-binding split barrel domain LIT28_02375 IPR004713 Calcium/proton exchanger LIT28_02375 IPR004798 Calcium/proton exchanger CAX LIT28_02375 IPR004837 Sodium/calcium exchanger membrane region LIT28_02380 IPR025548 YfkD-like protein LIT28_02385 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB LIT28_02385 IPR007197 Radical SAM LIT28_02385 IPR014866 YfkB-like domain LIT28_02385 IPR013785 Aldolase-type TIM barrel LIT28_02395 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain LIT28_02395 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily LIT28_02395 IPR011167 Iron-dependent fumarate hydratase LIT28_02395 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain LIT28_02400 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_02400 IPR002509 NodB homology domain LIT28_02400 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA LIT28_02405 IPR011257 DNA glycosylase LIT28_02405 IPR003265 HhH-GPD domain LIT28_02410 IPR002792 TRAM domain LIT28_02410 IPR010280 (Uracil-5)-methyltransferase family LIT28_02410 IPR012340 Nucleic acid-binding, OB-fold LIT28_02410 IPR030391 RNA methyltransferase TrmA, conserved site LIT28_02410 IPR030390 RNA methyltransferase TrmA, active site LIT28_02410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_02415 IPR020095 Pseudouridine synthase I, TruA, C-terminal LIT28_02415 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_02415 IPR001406 Pseudouridine synthase I, TruA LIT28_02415 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain LIT28_02425 IPR003593 AAA+ ATPase domain LIT28_02425 IPR009057 Homeobox-like domain superfamily LIT28_02425 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_02425 IPR000014 PAS domain LIT28_02425 IPR035965 PAS domain superfamily LIT28_02425 IPR002078 RNA polymerase sigma factor 54 interaction domain LIT28_02425 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LIT28_02425 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LIT28_02425 IPR025944 Sigma-54 interaction domain, conserved site LIT28_02425 IPR002197 DNA binding HTH domain, Fis-type LIT28_02435 IPR004841 Amino acid permease/ SLC12A domain LIT28_02435 IPR004840 Amino acid permease, conserved site LIT28_02440 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase LIT28_02440 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_02440 IPR002933 Peptidase M20 LIT28_02440 IPR011650 Peptidase M20, dimerisation domain LIT28_02465 IPR012338 Beta-lactamase/transpeptidase-like LIT28_02465 IPR015868 Glutaminase LIT28_02470 IPR003352 Phosphotransferase system, EIIC LIT28_02470 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component LIT28_02470 IPR001996 Phosphotransferase system, IIB component, type 1 LIT28_02470 IPR013013 Phosphotransferase system, EIIC component, type 1 LIT28_02470 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LIT28_02470 IPR036878 Glucose permease domain IIB LIT28_02475 IPR001466 Beta-lactamase-related LIT28_02475 IPR012338 Beta-lactamase/transpeptidase-like LIT28_02495 IPR001173 Glycosyltransferase 2-like LIT28_02495 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase LIT28_02495 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_02500 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal LIT28_02500 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase LIT28_02500 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation LIT28_02500 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily LIT28_02500 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal LIT28_02500 IPR017476 UDP-glucose/GDP-mannose dehydrogenase LIT28_02500 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_02500 IPR036291 NAD(P)-binding domain superfamily LIT28_02505 IPR036291 NAD(P)-binding domain superfamily LIT28_02505 IPR002376 Formyl transferase, N-terminal LIT28_02505 IPR005793 Formyl transferase, C-terminal LIT28_02505 IPR001509 NAD-dependent epimerase/dehydratase LIT28_02505 IPR021168 Bifunctional polymyxin resistance protein, ArnA LIT28_02505 IPR011034 Formyl transferase-like, C-terminal domain superfamily LIT28_02505 IPR036477 Formyl transferase, N-terminal domain superfamily LIT28_02510 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_02510 IPR001173 Glycosyltransferase 2-like LIT28_02510 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase LIT28_02520 IPR004184 Pyruvate formate lyase domain LIT28_02520 IPR005949 Formate acetyltransferase LIT28_02520 IPR001150 Glycine radical domain LIT28_02520 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LIT28_02525 IPR007197 Radical SAM LIT28_02525 IPR001989 Radical-activating enzyme, conserved site LIT28_02525 IPR013785 Aldolase-type TIM barrel LIT28_02525 IPR034457 Organic radical-activating enzymes LIT28_02525 IPR012839 Organic radical enzyme activase LIT28_02525 IPR034465 Pyruvate formate-lyase activase LIT28_02525 IPR012838 Pyruvate formate-lyase 1 activating enzyme LIT28_02530 IPR009695 Diacylglycerol glucosyltransferase, N-terminal LIT28_02530 IPR007235 Glycosyl transferase, family 28, C-terminal LIT28_02530 IPR023589 Processive diacylglycerol beta-glucosyltransferase LIT28_02545 IPR006680 Amidohydrolase-related LIT28_02545 IPR005920 Imidazolonepropionase LIT28_02545 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_02545 IPR032466 Metal-dependent hydrolase LIT28_02550 IPR036291 NAD(P)-binding domain superfamily LIT28_02550 IPR001509 NAD-dependent epimerase/dehydratase LIT28_02550 IPR013549 Domain of unknown function DUF1731 LIT28_02550 IPR010099 Epimerase family protein SDR39U1 LIT28_02555 IPR003783 Regulatory protein RecX LIT28_02555 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_02570 IPR012611 Small acid-soluble spore protein, SspK LIT28_02575 IPR026952 WVELL protein LIT28_02580 IPR007404 LexA-binding, inner membrane-associated putative hydrolase LIT28_02585 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_02585 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif LIT28_02585 IPR005760 A/G-specific adenine glycosylase MutY LIT28_02585 IPR003265 HhH-GPD domain LIT28_02585 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LIT28_02585 IPR029119 MutY, C-terminal LIT28_02585 IPR011257 DNA glycosylase LIT28_02595 IPR006341 Acid-soluble spore protein, gamma-type LIT28_02600 IPR025572 YgaB-like protein LIT28_02605 IPR007295 Domain of unknown function DUF402 LIT28_02605 IPR035930 FomD-like superfamily LIT28_02605 IPR016882 Uncharacterised protein family UPF0374 LIT28_02610 IPR003593 AAA+ ATPase domain LIT28_02610 IPR011527 ABC transporter type 1, transmembrane domain LIT28_02610 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_02610 IPR003439 ABC transporter-like LIT28_02610 IPR017871 ABC transporter, conserved site LIT28_02610 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_02610 IPR039421 Type I protein exporter LIT28_02615 IPR010343 Aromatic acid exporter family member 1 LIT28_02620 IPR013785 Aldolase-type TIM barrel LIT28_02620 IPR017932 Glutamine amidotransferase type 2 domain LIT28_02620 IPR002489 Glutamate synthase, alpha subunit, C-terminal LIT28_02620 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily LIT28_02620 IPR006982 Glutamate synthase, central-N LIT28_02620 IPR002932 Glutamate synthase domain LIT28_02620 IPR029055 Nucleophile aminohydrolases, N-terminal LIT28_02625 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_02625 IPR005814 Aminotransferase class-III LIT28_02625 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase LIT28_02625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_02625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_02630 IPR003593 AAA+ ATPase domain LIT28_02630 IPR003439 ABC transporter-like LIT28_02630 IPR017871 ABC transporter, conserved site LIT28_02630 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_02645 IPR013099 Potassium channel domain LIT28_02650 IPR036249 Thioredoxin-like superfamily LIT28_02650 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIT28_02650 IPR024706 Peroxiredoxin, AhpC-type LIT28_02650 IPR013766 Thioredoxin domain LIT28_02655 IPR036390 Winged helix DNA-binding domain superfamily LIT28_02655 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_02655 IPR002481 Ferric-uptake regulator LIT28_02660 IPR020912 Uncharacterised protein family UPF0295 LIT28_02760 IPR029072 YebC-like LIT28_02760 IPR026562 Probable transcriptional regulatory protein YeeN LIT28_02760 IPR026564 Transcriptional regulator TACO1-like, domain 3 LIT28_02760 IPR002876 Transcriptional regulator TACO1-like LIT28_02760 IPR017856 Integrase-like, N-terminal LIT28_02765 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_02765 IPR000086 NUDIX hydrolase domain LIT28_02765 IPR020084 NUDIX hydrolase, conserved site LIT28_02765 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_02765 IPR023214 HAD superfamily LIT28_02765 IPR036412 HAD-like superfamily LIT28_02765 IPR020476 NUDIX hydrolase LIT28_02770 IPR012338 Beta-lactamase/transpeptidase-like LIT28_02770 IPR001264 Glycosyl transferase, family 51 LIT28_02770 IPR023346 Lysozyme-like domain superfamily LIT28_02770 IPR036950 Penicillin binding protein transglycosylase domain LIT28_02770 IPR001460 Penicillin-binding protein, transpeptidase LIT28_02775 IPR012336 Thioredoxin-like fold LIT28_02775 IPR036249 Thioredoxin-like superfamily LIT28_02785 IPR004155 PBS lyase HEAT-like repeat LIT28_02785 IPR004453 Epoxyqueuosine reductase QueG LIT28_02785 IPR016024 Armadillo-type fold LIT28_02785 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIT28_02785 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIT28_02785 IPR013542 Domain of unknown function DUF1730 LIT28_02790 IPR024301 Putative amidase domain LIT28_02795 IPR029028 Alpha/beta knot methyltransferases LIT28_02795 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIT28_02795 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase LIT28_02795 IPR001537 tRNA/rRNA methyltransferase, SpoU type LIT28_02800 IPR000160 GGDEF domain LIT28_02800 IPR029787 Nucleotide cyclase LIT28_02800 IPR008984 SMAD/FHA domain superfamily LIT28_02800 IPR035919 EAL domain superfamily LIT28_02800 IPR000253 Forkhead-associated (FHA) domain LIT28_02800 IPR001633 EAL domain LIT28_02805 IPR010650 PrkA C-terminal domain LIT28_02805 IPR016230 Serine-protein kinase, PrkA LIT28_02805 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_02805 IPR013153 PrkA AAA domain LIT28_02810 IPR006698 Uncharacterised protein family UPF0229 LIT28_02810 IPR014230 Sporulation protein YhbH LIT28_02825 IPR018093 BCCT transporter, conserved site LIT28_02825 IPR000060 BCCT transporter family LIT28_02830 IPR013783 Immunoglobulin-like fold LIT28_02830 IPR013661 Peptidase M9, collagenase, N-terminal domain LIT28_02830 IPR002169 Peptidase M9A/M9B, collagenase, bacterial LIT28_02830 IPR022409 PKD/Chitinase domain LIT28_02830 IPR000601 PKD domain LIT28_02830 IPR041379 Collagenase ColG, catalytic helper subdomain LIT28_02830 IPR035986 PKD domain superfamily LIT28_02840 IPR031905 Flotillin, C-terminal domain LIT28_02840 IPR001107 Band 7 domain LIT28_02840 IPR036013 Band 7/SPFH domain superfamily LIT28_02840 IPR027705 Flotillin family LIT28_02845 IPR033479 Double Cache domain 1 LIT28_02845 IPR003660 HAMP domain LIT28_02845 IPR029151 Periplasmic sensor-like domain superfamily LIT28_02845 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_02850 IPR000014 PAS domain LIT28_02850 IPR005467 Histidine kinase domain LIT28_02850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_02850 IPR035965 PAS domain superfamily LIT28_02850 IPR013767 PAS fold LIT28_02850 IPR033463 Single cache domain 3 LIT28_02850 IPR029151 Periplasmic sensor-like domain superfamily LIT28_02850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_02850 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB LIT28_02850 IPR039506 SpoOB, alpha-helical domain LIT28_02850 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_02855 IPR001789 Signal transduction response regulator, receiver domain LIT28_02855 IPR028141 Transcriptional regulator LIT28_02855 IPR024187 Signal transduction response regulator, citrate/malate metabolism LIT28_02855 IPR011006 CheY-like superfamily LIT28_02860 IPR004680 Citrate transporter-like domain LIT28_02860 IPR014738 Citrate transporter LIT28_02880 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) LIT28_02880 IPR029052 Metallo-dependent phosphatase-like LIT28_02880 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_02885 IPR039420 Transcriptional regulatory protein WalR-like LIT28_02885 IPR001789 Signal transduction response regulator, receiver domain LIT28_02885 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_02885 IPR011006 CheY-like superfamily LIT28_02885 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_02890 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_02890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_02890 IPR005467 Histidine kinase domain LIT28_02890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_02890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_02890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_02900 IPR016997 Uncharacterised conserved protein UCP032442 LIT28_02900 IPR039563 Peptidase C39 single domain protein LIT28_02900 IPR039564 Peptidase C39-like LIT28_02905 IPR033479 Double Cache domain 1 LIT28_02905 IPR003660 HAMP domain LIT28_02905 IPR029151 Periplasmic sensor-like domain superfamily LIT28_02905 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_02910 IPR029151 Periplasmic sensor-like domain superfamily LIT28_02910 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_02910 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB LIT28_02910 IPR039506 SpoOB, alpha-helical domain LIT28_02910 IPR033463 Single cache domain 3 LIT28_02910 IPR013767 PAS fold LIT28_02910 IPR000014 PAS domain LIT28_02910 IPR005467 Histidine kinase domain LIT28_02910 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_02910 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_02915 IPR001789 Signal transduction response regulator, receiver domain LIT28_02915 IPR024187 Signal transduction response regulator, citrate/malate metabolism LIT28_02915 IPR011006 CheY-like superfamily LIT28_02920 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes LIT28_02920 IPR004679 2-hydroxycarboxylate transporter LIT28_02925 IPR015884 Malic enzyme, conserved site LIT28_02925 IPR012301 Malic enzyme, N-terminal domain LIT28_02925 IPR037062 Malic enzyme, N-terminal domain superfamily LIT28_02925 IPR012302 Malic enzyme, NAD-binding LIT28_02925 IPR001891 Malic oxidoreductase LIT28_02925 IPR036291 NAD(P)-binding domain superfamily LIT28_02935 IPR000620 EamA domain LIT28_02940 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_02940 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_02940 IPR000524 Transcription regulator HTH, GntR LIT28_02940 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_02940 IPR036390 Winged helix DNA-binding domain superfamily LIT28_02940 IPR004839 Aminotransferase, class I/classII LIT28_02950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_02950 IPR013767 PAS fold LIT28_02950 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_02950 IPR000014 PAS domain LIT28_02950 IPR003660 HAMP domain LIT28_02950 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_02950 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_02950 IPR005467 Histidine kinase domain LIT28_02950 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_02950 IPR041328 ResE, histidine kinase sensor domain LIT28_02950 IPR035965 PAS domain superfamily LIT28_02955 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_02955 IPR011006 CheY-like superfamily LIT28_02955 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_02955 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_02955 IPR001789 Signal transduction response regulator, receiver domain LIT28_02955 IPR039420 Transcriptional regulatory protein WalR-like LIT28_02965 IPR016193 Cytidine deaminase-like LIT28_02965 IPR003786 Sulfur carrier protein FdhD LIT28_02970 IPR036010 2Fe-2S ferredoxin-like superfamily LIT28_02970 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding LIT28_02970 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LIT28_02970 IPR006657 Molybdopterin dinucleotide-binding domain LIT28_02970 IPR006478 Formate dehydrogenase, alpha subunit LIT28_02970 IPR041924 Formate dehydrogenase H, N-terminal LIT28_02970 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIT28_02970 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIT28_02970 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LIT28_02970 IPR006656 Molybdopterin oxidoreductase LIT28_02970 IPR009010 Aspartate decarboxylase-like domain superfamily LIT28_02975 IPR012440 Protein of unknown function DUF1641 LIT28_02985 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LIT28_02985 IPR036291 NAD(P)-binding domain superfamily LIT28_02985 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LIT28_02985 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 LIT28_02985 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 LIT28_02985 IPR008141 Alanine dehydrogenase LIT28_02990 IPR002293 Amino acid/polyamine transporter I LIT28_02995 IPR018334 ArsR-type transcription regulator, HTH motif LIT28_02995 IPR001845 HTH ArsR-type DNA-binding domain LIT28_02995 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_02995 IPR036390 Winged helix DNA-binding domain superfamily LIT28_02995 IPR011991 ArsR-like helix-turn-helix domain LIT28_03000 IPR001757 P-type ATPase LIT28_03000 IPR036163 Heavy metal-associated domain superfamily LIT28_03000 IPR006121 Heavy metal-associated domain, HMA LIT28_03000 IPR017969 Heavy-metal-associated, conserved site LIT28_03000 IPR036412 HAD-like superfamily LIT28_03000 IPR027256 P-type ATPase, subfamily IB LIT28_03000 IPR008250 P-type ATPase, A domain superfamily LIT28_03000 IPR023298 P-type ATPase, transmembrane domain superfamily LIT28_03000 IPR018303 P-type ATPase, phosphorylation site LIT28_03000 IPR023299 P-type ATPase, cytoplasmic domain N LIT28_03000 IPR023214 HAD superfamily LIT28_03005 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal LIT28_03005 IPR006405 Nicotinate phosphoribosyltransferase pncB-type LIT28_03005 IPR007229 Nicotinate phosphoribosyltransferase family LIT28_03005 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain LIT28_03005 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain LIT28_03005 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase LIT28_03005 IPR013785 Aldolase-type TIM barrel LIT28_03020 IPR001570 Peptidase M4, C-terminal LIT28_03020 IPR025711 PepSY domain LIT28_03020 IPR027268 Peptidase M4/M1, CTD superfamily LIT28_03020 IPR013856 Peptidase M4 domain LIT28_03020 IPR023612 Peptidase M4 LIT28_03020 IPR011096 FTP domain LIT28_03040 IPR007391 Vancomycin resistance VanW LIT28_03045 IPR004474 Cell envelope-related transcriptional attenuator domain LIT28_03050 IPR008276 Concentrative nucleoside transporter LIT28_03050 IPR002668 Concentrative nucleoside transporter N-terminal domain LIT28_03050 IPR011657 Concentrative nucleoside transporter C-terminal domain LIT28_03050 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LIT28_03055 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_03055 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_03055 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_03055 IPR037478 YwkD-like domain LIT28_03060 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_03060 IPR002550 CNNM, transmembrane domain LIT28_03060 IPR000644 CBS domain LIT28_03060 IPR005170 Transporter-associated domain LIT28_03060 IPR016169 FAD-binding, type PCMH, subdomain 2 LIT28_03065 IPR020557 Fumarate lyase, conserved site LIT28_03065 IPR024083 Fumarase/histidase, N-terminal LIT28_03065 IPR018951 Fumarase C, C-terminal LIT28_03065 IPR000362 Fumarate lyase family LIT28_03065 IPR022761 Fumarate lyase, N-terminal LIT28_03065 IPR008948 L-Aspartase-like LIT28_03065 IPR004708 Aspartate ammonia-lyase LIT28_03070 IPR003804 L-lactate permease LIT28_03075 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_03075 IPR036390 Winged helix DNA-binding domain superfamily LIT28_03075 IPR011991 ArsR-like helix-turn-helix domain LIT28_03075 IPR001845 HTH ArsR-type DNA-binding domain LIT28_03080 IPR012610 Small acid-soluble spore protein, SspH LIT28_03085 IPR005279 Dipeptide/tripeptide permease LIT28_03085 IPR020846 Major facilitator superfamily domain LIT28_03085 IPR036259 MFS transporter superfamily LIT28_03085 IPR000109 Proton-dependent oligopeptide transporter family LIT28_03085 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site LIT28_03090 IPR002491 ABC transporter periplasmic binding domain LIT28_03095 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_03095 IPR037294 ABC transporter, BtuC-like LIT28_03100 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_03100 IPR037294 ABC transporter, BtuC-like LIT28_03105 IPR003593 AAA+ ATPase domain LIT28_03105 IPR017871 ABC transporter, conserved site LIT28_03105 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03105 IPR003439 ABC transporter-like LIT28_03110 IPR013216 Methyltransferase type 11 LIT28_03110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_03115 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LIT28_03115 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type LIT28_03115 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_03115 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_03115 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_03115 IPR004839 Aminotransferase, class I/classII LIT28_03120 IPR001509 NAD-dependent epimerase/dehydratase LIT28_03120 IPR036291 NAD(P)-binding domain superfamily LIT28_03125 IPR023031 Orotate phosphoribosyltransferase LIT28_03125 IPR000836 Phosphoribosyltransferase domain LIT28_03125 IPR029057 Phosphoribosyltransferase-like LIT28_03125 IPR004467 Orotate phosphoribosyl transferase domain LIT28_03130 IPR036412 HAD-like superfamily LIT28_03130 IPR000086 NUDIX hydrolase domain LIT28_03130 IPR020084 NUDIX hydrolase, conserved site LIT28_03130 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_03130 IPR020476 NUDIX hydrolase LIT28_03130 IPR023214 HAD superfamily LIT28_03130 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_03135 IPR036465 von Willebrand factor A-like domain superfamily LIT28_03135 IPR002035 von Willebrand factor, type A LIT28_03140 IPR003593 AAA+ ATPase domain LIT28_03140 IPR011704 ATPase, dynein-related, AAA domain LIT28_03140 IPR001270 ClpA/B family LIT28_03140 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03145 IPR027379 Cardiolipin synthase N-terminal LIT28_03145 IPR030874 Cardiolipin synthase, Firmicutes-type LIT28_03145 IPR022924 Cardiolipin synthase LIT28_03145 IPR025202 Phospholipase D-like domain LIT28_03145 IPR001736 Phospholipase D/Transphosphatidylase LIT28_03155 IPR001633 EAL domain LIT28_03155 IPR035919 EAL domain superfamily LIT28_03155 IPR000160 GGDEF domain LIT28_03155 IPR005330 MHYT domain LIT28_03155 IPR029787 Nucleotide cyclase LIT28_03160 IPR002293 Amino acid/polyamine transporter I LIT28_03165 IPR011663 UbiC transcription regulator-associated LIT28_03165 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_03165 IPR036390 Winged helix DNA-binding domain superfamily LIT28_03165 IPR012770 Trehalose operon transcriptional repressor LIT28_03165 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LIT28_03165 IPR000524 Transcription regulator HTH, GntR LIT28_03170 IPR011296 Phosphotransferase system, trehalose-specific IIBC component LIT28_03170 IPR001996 Phosphotransferase system, IIB component, type 1 LIT28_03170 IPR013013 Phosphotransferase system, EIIC component, type 1 LIT28_03170 IPR003352 Phosphotransferase system, EIIC LIT28_03170 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LIT28_03170 IPR036878 Glucose permease domain IIB LIT28_03170 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LIT28_03175 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LIT28_03175 IPR017853 Glycoside hydrolase superfamily LIT28_03175 IPR032091 Maltogenic Amylase, C-terminal LIT28_03175 IPR012769 Trehalose-6-phosphate hydrolase LIT28_03175 IPR013780 Glycosyl hydrolase, all-beta LIT28_03190 IPR004995 Bacillus/Clostridium Ger spore germination protein LIT28_03195 IPR002575 Aminoglycoside phosphotransferase LIT28_03195 IPR011009 Protein kinase-like domain superfamily LIT28_03200 IPR001463 Sodium:alanine symporter LIT28_03205 IPR003593 AAA+ ATPase domain LIT28_03205 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LIT28_03205 IPR003439 ABC transporter-like LIT28_03205 IPR017871 ABC transporter, conserved site LIT28_03205 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03210 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LIT28_03210 IPR018313 Solute-binding protein family 3, conserved site LIT28_03210 IPR001320 Ionotropic glutamate receptor LIT28_03215 IPR035906 MetI-like superfamily LIT28_03215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_03215 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LIT28_03220 IPR035906 MetI-like superfamily LIT28_03220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_03220 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LIT28_03225 IPR004840 Amino acid permease, conserved site LIT28_03225 IPR004841 Amino acid permease/ SLC12A domain LIT28_03250 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_03250 IPR028349 Protein PafC LIT28_03250 IPR013196 Helix-turn-helix, type 11 LIT28_03250 IPR036390 Winged helix DNA-binding domain superfamily LIT28_03250 IPR026881 WYL domain LIT28_03250 IPR001034 DeoR-type HTH domain LIT28_03255 IPR024072 Dihydrofolate reductase-like domain superfamily LIT28_03255 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal LIT28_03260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_03260 IPR005467 Histidine kinase domain LIT28_03260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_03260 IPR041328 ResE, histidine kinase sensor domain LIT28_03260 IPR000014 PAS domain LIT28_03260 IPR035965 PAS domain superfamily LIT28_03260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_03260 IPR013767 PAS fold LIT28_03260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_03260 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_03260 IPR003660 HAMP domain LIT28_03265 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_03265 IPR001789 Signal transduction response regulator, receiver domain LIT28_03265 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_03265 IPR011006 CheY-like superfamily LIT28_03265 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_03265 IPR039420 Transcriptional regulatory protein WalR-like LIT28_03275 IPR002645 STAS domain LIT28_03275 IPR018045 Sulphate anion transporter, conserved site LIT28_03275 IPR011547 SLC26A/SulP transporter domain LIT28_03275 IPR001902 SLC26A/SulP transporter LIT28_03275 IPR036513 STAS domain superfamily LIT28_03280 IPR006016 UspA LIT28_03280 IPR006015 Universal stress protein A family LIT28_03280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_03290 IPR000914 Solute-binding protein family 5 domain LIT28_03290 IPR023765 Solute-binding protein family 5, conserved site LIT28_03290 IPR039424 Solute-binding protein family 5 LIT28_03290 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_03295 IPR035906 MetI-like superfamily LIT28_03295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_03300 IPR035906 MetI-like superfamily LIT28_03300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_03305 IPR003439 ABC transporter-like LIT28_03305 IPR017871 ABC transporter, conserved site LIT28_03305 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03305 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_03305 IPR003593 AAA+ ATPase domain LIT28_03310 IPR003593 AAA+ ATPase domain LIT28_03310 IPR003439 ABC transporter-like LIT28_03310 IPR017871 ABC transporter, conserved site LIT28_03310 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_03310 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03315 IPR000849 Sugar phosphate transporter LIT28_03315 IPR036259 MFS transporter superfamily LIT28_03315 IPR021159 Glycerate/sugar phosphate transporter, conserved site LIT28_03315 IPR011701 Major facilitator superfamily LIT28_03315 IPR005267 Glycerol-3-phosphate transporter LIT28_03315 IPR020846 Major facilitator superfamily domain LIT28_03320 IPR000835 MarR-type HTH domain LIT28_03320 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_03320 IPR036390 Winged helix DNA-binding domain superfamily LIT28_03325 IPR005829 Sugar transporter, conserved site LIT28_03325 IPR020846 Major facilitator superfamily domain LIT28_03325 IPR036259 MFS transporter superfamily LIT28_03325 IPR004638 Drug resistance transporter EmrB-like LIT28_03325 IPR011701 Major facilitator superfamily LIT28_03330 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_03330 IPR000843 LacI-type HTH domain LIT28_03330 IPR028082 Periplasmic binding protein-like I LIT28_03335 IPR029056 Ribokinase-like LIT28_03335 IPR011877 Ribokinase LIT28_03335 IPR011611 Carbohydrate kinase PfkB LIT28_03335 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LIT28_03335 IPR002139 Ribokinase/fructokinase LIT28_03340 IPR023064 D-ribose pyranase LIT28_03340 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU LIT28_03340 IPR023750 RbsD-like superfamily LIT28_03345 IPR003593 AAA+ ATPase domain LIT28_03345 IPR003439 ABC transporter-like LIT28_03345 IPR017871 ABC transporter, conserved site LIT28_03345 IPR015861 ABC transporter, ribose import, RbsA LIT28_03345 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03350 IPR001851 ABC transporter, permease LIT28_03355 IPR025997 Periplasmic binding protein LIT28_03355 IPR028082 Periplasmic binding protein-like I LIT28_03360 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase LIT28_03360 IPR022999 Transaldolase type 3B, putative LIT28_03360 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial LIT28_03360 IPR018225 Transaldolase, active site LIT28_03360 IPR001585 Transaldolase/Fructose-6-phosphate aldolase LIT28_03360 IPR013785 Aldolase-type TIM barrel LIT28_03365 IPR008757 Peptidase M6-like, domain LIT28_03365 IPR012300 Peptidase M6, InhA LIT28_03380 IPR020843 Polyketide synthase, enoylreductase domain LIT28_03380 IPR036291 NAD(P)-binding domain superfamily LIT28_03380 IPR011032 GroES-like superfamily LIT28_03380 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LIT28_03380 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_03380 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_03390 IPR008947 Phospholipase C/P1 nuclease domain superfamily LIT28_03390 IPR029002 Phospholipase C/D LIT28_03390 IPR001531 Zinc-dependent phospholipase C LIT28_03395 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LIT28_03395 IPR005135 Endonuclease/exonuclease/phosphatase LIT28_03395 IPR017766 Sphingomyelinase C/phospholipase C LIT28_03420 IPR003824 Undecaprenyl-diphosphatase UppP LIT28_03425 IPR003660 HAMP domain LIT28_03425 IPR033479 Double Cache domain 1 LIT28_03425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_03425 IPR029151 Periplasmic sensor-like domain superfamily LIT28_03430 IPR036908 RlpA-like domain superfamily LIT28_03430 IPR036779 LysM domain superfamily LIT28_03430 IPR010611 3D domain LIT28_03430 IPR018392 LysM domain LIT28_03435 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_03435 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_03445 IPR005754 Sortase family LIT28_03445 IPR042007 Sortase A LIT28_03445 IPR023365 Sortase domain superfamily LIT28_03450 IPR036259 MFS transporter superfamily LIT28_03450 IPR020846 Major facilitator superfamily domain LIT28_03450 IPR005279 Dipeptide/tripeptide permease LIT28_03450 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site LIT28_03450 IPR000109 Proton-dependent oligopeptide transporter family LIT28_03455 IPR004685 Branched-chain amino acid transport system II carrier protein LIT28_03470 IPR004840 Amino acid permease, conserved site LIT28_03470 IPR004841 Amino acid permease/ SLC12A domain LIT28_03475 IPR026033 Azaguanine-like transporters LIT28_03475 IPR006043 Xanthine/uracil/vitamin C permease LIT28_03490 IPR016181 Acyl-CoA N-acyltransferase LIT28_03490 IPR000182 GNAT domain LIT28_03490 IPR039143 Glucosamine 6-phosphate N-acetyltransferase LIT28_03500 IPR038770 Sodium/solute symporter superfamily LIT28_03500 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LIT28_03500 IPR036291 NAD(P)-binding domain superfamily LIT28_03500 IPR003148 Regulator of K+ conductance, N-terminal LIT28_03500 IPR006153 Cation/H+ exchanger LIT28_03500 IPR006037 Regulator of K+ conductance, C-terminal LIT28_03510 IPR024791 Cytochrome c oxidase subunit III LIT28_03510 IPR014246 Quinol oxidase subunit III LIT28_03510 IPR000298 Cytochrome c oxidase subunit III-like LIT28_03510 IPR035973 Cytochrome c oxidase subunit III-like superfamily LIT28_03510 IPR033946 Ubiquinol oxidase subunit III domain LIT28_03510 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle LIT28_03515 IPR023616 Cytochrome c oxidase-like, subunit I domain LIT28_03515 IPR036927 Cytochrome c oxidase-like, subunit I superfamily LIT28_03515 IPR000883 Cytochrome c oxidase subunit I LIT28_03515 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site LIT28_03515 IPR014233 Quinol oxidase subunit I LIT28_03520 IPR006332 Quinol oxidase subunit II LIT28_03520 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain LIT28_03520 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily LIT28_03520 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain LIT28_03520 IPR008972 Cupredoxin LIT28_03520 IPR006333 Cytochrome o ubiquinol oxidase subunit II LIT28_03520 IPR002429 Cytochrome c oxidase subunit II-like C-terminal LIT28_03525 IPR004840 Amino acid permease, conserved site LIT28_03525 IPR004841 Amino acid permease/ SLC12A domain LIT28_03530 IPR016997 Uncharacterised conserved protein UCP032442 LIT28_03530 IPR039563 Peptidase C39 single domain protein LIT28_03530 IPR039564 Peptidase C39-like LIT28_03535 IPR002933 Peptidase M20 LIT28_03535 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_03535 IPR017439 Amidohydrolase LIT28_03535 IPR011650 Peptidase M20, dimerisation domain LIT28_03545 IPR038377 Sodium/glucose symporter superfamily LIT28_03545 IPR001734 Sodium/solute symporter LIT28_03550 IPR004995 Bacillus/Clostridium Ger spore germination protein LIT28_03555 IPR004761 Spore germination GerAB LIT28_03560 IPR008844 Spore germination GerAC LIT28_03560 IPR038501 Spore germination GerAC superfamily LIT28_03565 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03565 IPR006073 GTP binding domain LIT28_03565 IPR041069 FeoB, cytosolic helical domain LIT28_03565 IPR030389 FeoB-type guanine nucleotide-binding (G) domain LIT28_03565 IPR003373 Ferrous iron transport protein B LIT28_03565 IPR011640 Ferrous iron transport protein B, C-terminal LIT28_03565 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LIT28_03570 IPR030389 FeoB-type guanine nucleotide-binding (G) domain LIT28_03570 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LIT28_03570 IPR006073 GTP binding domain LIT28_03570 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03570 IPR003373 Ferrous iron transport protein B LIT28_03570 IPR041069 FeoB, cytosolic helical domain LIT28_03570 IPR011640 Ferrous iron transport protein B, C-terminal LIT28_03575 IPR008988 Transcriptional repressor, C-terminal LIT28_03575 IPR005225 Small GTP-binding protein domain LIT28_03575 IPR006073 GTP binding domain LIT28_03575 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03575 IPR041069 FeoB, cytosolic helical domain LIT28_03575 IPR038157 Ferrous iron transporter, core domain LIT28_03575 IPR011640 Ferrous iron transport protein B, C-terminal LIT28_03575 IPR003373 Ferrous iron transport protein B LIT28_03575 IPR007167 Ferrous iron transporter FeoA domain LIT28_03575 IPR030389 FeoB-type guanine nucleotide-binding (G) domain LIT28_03575 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LIT28_03580 IPR024370 PBP domain LIT28_03580 IPR011862 Phosphate binding protein LIT28_03585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_03585 IPR035906 MetI-like superfamily LIT28_03585 IPR011864 Phosphate ABC transporter, permease protein PstC LIT28_03590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_03590 IPR035906 MetI-like superfamily LIT28_03590 IPR005672 Phosphate transport system permease protein PstA LIT28_03600 IPR001036 Acriflavin resistance protein LIT28_03600 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LIT28_03720 IPR000644 CBS domain LIT28_03735 IPR003646 SH3-like domain, bacterial-type LIT28_03735 IPR000834 Peptidase M14, carboxypeptidase A LIT28_03740 IPR016084 Haem oxygenase-like, multi-helical LIT28_03740 IPR026285 TenA_E protein LIT28_03740 IPR004305 Thiaminase-2/PQQC LIT28_03740 IPR027574 Thiaminase II LIT28_03745 IPR017871 ABC transporter, conserved site LIT28_03745 IPR003439 ABC transporter-like LIT28_03745 IPR003593 AAA+ ATPase domain LIT28_03745 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_03750 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_03750 IPR035906 MetI-like superfamily LIT28_03755 IPR015168 SsuA/THI5-like LIT28_03755 IPR027939 NMT1/THI5 family LIT28_03760 IPR022998 Thiamine phosphate synthase/TenI LIT28_03760 IPR036206 Thiamin phosphate synthase superfamily LIT28_03760 IPR013785 Aldolase-type TIM barrel LIT28_03765 IPR006076 FAD dependent oxidoreductase LIT28_03765 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_03765 IPR012727 Glycine oxidase ThiO LIT28_03770 IPR012675 Beta-grasp domain superfamily LIT28_03770 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LIT28_03770 IPR010035 ThiS, thiamine-biosynthesis LIT28_03770 IPR003749 Sulfur carrier ThiS/MoaD-like LIT28_03775 IPR008867 Thiazole synthase LIT28_03775 IPR033983 Thiazole synthase ThiG LIT28_03775 IPR013785 Aldolase-type TIM barrel LIT28_03780 IPR035985 Ubiquitin-activating enzyme LIT28_03780 IPR000594 THIF-type NAD/FAD binding fold LIT28_03785 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase LIT28_03785 IPR029056 Ribokinase-like LIT28_03785 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase LIT28_03805 IPR004623 Potassium-transporting ATPase A chain LIT28_03810 IPR023299 P-type ATPase, cytoplasmic domain N LIT28_03810 IPR018303 P-type ATPase, phosphorylation site LIT28_03810 IPR001757 P-type ATPase LIT28_03810 IPR023298 P-type ATPase, transmembrane domain superfamily LIT28_03810 IPR008250 P-type ATPase, A domain superfamily LIT28_03810 IPR036412 HAD-like superfamily LIT28_03810 IPR023214 HAD superfamily LIT28_03810 IPR006391 P-type ATPase, B chain, subfamily IA LIT28_03815 IPR003820 Potassium-transporting ATPase C chain LIT28_03820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_03820 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal LIT28_03825 IPR011701 Major facilitator superfamily LIT28_03825 IPR036259 MFS transporter superfamily LIT28_03825 IPR020846 Major facilitator superfamily domain LIT28_03830 IPR036390 Winged helix DNA-binding domain superfamily LIT28_03830 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_03830 IPR023187 Transcriptional regulator MarR-type, conserved site LIT28_03830 IPR000835 MarR-type HTH domain LIT28_03845 IPR026033 Azaguanine-like transporters LIT28_03845 IPR006043 Xanthine/uracil/vitamin C permease LIT28_03850 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_03850 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_03850 IPR036291 NAD(P)-binding domain superfamily LIT28_03855 IPR038063 L,D-transpeptidase catalytic domain-like LIT28_03855 IPR005490 L,D-transpeptidase catalytic domain LIT28_03855 IPR041597 L,D-transpeptidase C-terminal domain LIT28_03865 IPR029056 Ribokinase-like LIT28_03865 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LIT28_03865 IPR011611 Carbohydrate kinase PfkB LIT28_03870 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily LIT28_03870 IPR001362 Glycoside hydrolase, family 32 LIT28_03870 IPR018053 Glycoside hydrolase, family 32, active site LIT28_03870 IPR013189 Glycosyl hydrolase family 32, C-terminal LIT28_03870 IPR013148 Glycosyl hydrolase family 32, N-terminal LIT28_03870 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily LIT28_03870 IPR006232 Sucrose-6-phosphate hydrolase LIT28_03875 IPR036878 Glucose permease domain IIB LIT28_03875 IPR013013 Phosphotransferase system, EIIC component, type 1 LIT28_03875 IPR003352 Phosphotransferase system, EIIC LIT28_03875 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LIT28_03875 IPR010973 Phosphotransferase system, sucrose-specific IIBC component LIT28_03875 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LIT28_03875 IPR001996 Phosphotransferase system, IIB component, type 1 LIT28_03880 IPR000843 LacI-type HTH domain LIT28_03880 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_03880 IPR025997 Periplasmic binding protein LIT28_03880 IPR028082 Periplasmic binding protein-like I LIT28_03890 IPR013766 Thioredoxin domain LIT28_03890 IPR036249 Thioredoxin-like superfamily LIT28_03895 IPR003752 Disulphide bond formation protein DsbB/BdbC LIT28_03895 IPR012187 Disulphide bond formation protein BdbC LIT28_03895 IPR023380 DsbB-like superfamily LIT28_03900 IPR025431 YhdB-like protein LIT28_03910 IPR004761 Spore germination GerAB LIT28_03920 IPR004995 Bacillus/Clostridium Ger spore germination protein LIT28_03930 IPR026021 Putative NAD(P)H nitroreductase YdjA-like LIT28_03930 IPR000415 Nitroreductase-like LIT28_03930 IPR029479 Nitroreductase LIT28_03935 IPR007390 Sporulation stage V, protein R LIT28_03960 IPR023536 Coenzyme A disulphide reductase, staphyolococci LIT28_03960 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_03960 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIT28_03960 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT28_03960 IPR017758 Coenzyme A disulphide reductase LIT28_03960 IPR023753 FAD/NAD(P)-binding domain LIT28_03965 IPR003735 Metal-sensitive transcriptional repressor LIT28_03965 IPR038390 Metal-sensitive transcriptional repressor superfamily LIT28_03970 IPR036873 Rhodanese-like domain superfamily LIT28_03970 IPR001763 Rhodanese-like domain LIT28_03970 IPR001455 TusA-like domain LIT28_03970 IPR036868 TusA-like domain superfamily LIT28_03975 IPR001763 Rhodanese-like domain LIT28_03975 IPR001279 Metallo-beta-lactamase LIT28_03975 IPR036873 Rhodanese-like domain superfamily LIT28_03975 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_03980 IPR001455 TusA-like domain LIT28_03980 IPR036868 TusA-like domain superfamily LIT28_03985 IPR036873 Rhodanese-like domain superfamily LIT28_03985 IPR001763 Rhodanese-like domain LIT28_03995 IPR027396 DsrEFH-like LIT28_03995 IPR032836 DsrE2-like family LIT28_04000 IPR002781 Transmembrane protein TauE-like LIT28_04010 IPR004474 Cell envelope-related transcriptional attenuator domain LIT28_04015 IPR011032 GroES-like superfamily LIT28_04015 IPR020843 Polyketide synthase, enoylreductase domain LIT28_04015 IPR036291 NAD(P)-binding domain superfamily LIT28_04015 IPR014188 Acrylyl-CoA reductase AcuI LIT28_04015 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_04015 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_04020 IPR003841 Sodium-dependent phosphate transport protein LIT28_04020 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein LIT28_04025 IPR004734 Multidrug resistance protein LIT28_04025 IPR011701 Major facilitator superfamily LIT28_04025 IPR020846 Major facilitator superfamily domain LIT28_04025 IPR036259 MFS transporter superfamily LIT28_04025 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIT28_04035 IPR013011 Phosphotransferase system, EIIB component, type 2 LIT28_04035 IPR036095 PTS system IIB component-like superfamily LIT28_04035 IPR002178 PTS EIIA type-2 domain LIT28_04035 IPR016152 Phosphotransferase/anion transporter LIT28_04035 IPR036634 PRD domain superfamily LIT28_04035 IPR007737 Mga helix-turn-helix domain LIT28_04035 IPR013196 Helix-turn-helix, type 11 LIT28_04035 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_04035 IPR011608 PRD domain LIT28_04035 IPR036390 Winged helix DNA-binding domain superfamily LIT28_04040 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit LIT28_04040 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily LIT28_04045 IPR013012 Phosphotransferase system, EIIB component, type 3 LIT28_04045 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LIT28_04045 IPR036095 PTS system IIB component-like superfamily LIT28_04050 IPR004796 Phosphotransferase system, cellobiose-type IIC component LIT28_04050 IPR003352 Phosphotransferase system, EIIC LIT28_04050 IPR004501 Phosphotransferase system, EIIC component, type 3 LIT28_04065 IPR036779 LysM domain superfamily LIT28_04065 IPR010611 3D domain LIT28_04065 IPR018392 LysM domain LIT28_04065 IPR036908 RlpA-like domain superfamily LIT28_04070 IPR003838 ABC transporter permease protein domain LIT28_04070 IPR005085 Carbohydrate binding module family 25 LIT28_04070 IPR025857 MacB-like periplasmic core domain LIT28_04075 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_04075 IPR017871 ABC transporter, conserved site LIT28_04075 IPR003439 ABC transporter-like LIT28_04075 IPR003593 AAA+ ATPase domain LIT28_04085 IPR011737 Conserved hypothetical protein CHP02206, TP0381 LIT28_04100 IPR004685 Branched-chain amino acid transport system II carrier protein LIT28_04105 IPR009078 Ferritin-like superfamily LIT28_04105 IPR007760 Manganese catalase LIT28_04105 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain LIT28_04105 IPR012347 Ferritin-like LIT28_04110 IPR016571 Spore coat assembly protein CotJB LIT28_04110 IPR024207 Spore coat assembly protein CotJB, domain LIT28_04115 IPR020256 Spore coat protein CotJA LIT28_04130 IPR016194 SPOC-like, C-terminal domain superfamily LIT28_04130 IPR009187 Non-homologous end joining protein Ku, prokaryotic type LIT28_04130 IPR006164 Ku70/Ku80 beta-barrel domain LIT28_04140 IPR032816 SNARE associated Golgi protein LIT28_04180 IPR002293 Amino acid/polyamine transporter I LIT28_04185 IPR038770 Sodium/solute symporter superfamily LIT28_04185 IPR006153 Cation/H+ exchanger LIT28_04185 IPR004771 K+/H+ exchanger LIT28_04195 IPR001347 Sugar isomerase (SIS) LIT28_04195 IPR009057 Homeobox-like domain superfamily LIT28_04195 IPR000281 Helix-turn-helix protein RpiR LIT28_04195 IPR035472 RpiR-like, SIS domain LIT28_04195 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_04200 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein LIT28_04200 IPR001347 Sugar isomerase (SIS) LIT28_04200 IPR005486 Glucokinase regulatory protein, conserved site LIT28_04200 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ LIT28_04205 IPR036878 Glucose permease domain IIB LIT28_04205 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LIT28_04205 IPR003352 Phosphotransferase system, EIIC LIT28_04205 IPR013013 Phosphotransferase system, EIIC component, type 1 LIT28_04205 IPR001996 Phosphotransferase system, IIB component, type 1 LIT28_04215 IPR032808 DoxX family LIT28_04230 IPR000620 EamA domain LIT28_04235 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_04235 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LIT28_04235 IPR036390 Winged helix DNA-binding domain superfamily LIT28_04235 IPR019888 Transcription regulator AsnC-type LIT28_04235 IPR000485 AsnC-type HTH domain LIT28_04235 IPR011008 Dimeric alpha-beta barrel LIT28_04235 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LIT28_04245 IPR000390 Small multidrug resistance protein family LIT28_04250 IPR000390 Small multidrug resistance protein family LIT28_04255 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_04255 IPR041603 YvdT, C-terminal LIT28_04255 IPR001647 DNA-binding HTH domain, TetR-type LIT28_04255 IPR009057 Homeobox-like domain superfamily LIT28_04260 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIT28_04260 IPR005829 Sugar transporter, conserved site LIT28_04260 IPR004734 Multidrug resistance protein LIT28_04260 IPR020846 Major facilitator superfamily domain LIT28_04260 IPR011701 Major facilitator superfamily LIT28_04260 IPR036259 MFS transporter superfamily LIT28_04265 IPR029062 Class I glutamine amidotransferase-like LIT28_04265 IPR002818 DJ-1/PfpI LIT28_04265 IPR006286 Deglycase PfpI LIT28_04270 IPR029062 Class I glutamine amidotransferase-like LIT28_04270 IPR020835 Catalase superfamily LIT28_04270 IPR041399 Large catalase, C-terminal domain LIT28_04270 IPR010582 Catalase immune-responsive domain LIT28_04270 IPR002226 Catalase haem-binding site LIT28_04270 IPR024712 Catalase, mono-functional, haem-containing, clade 2 LIT28_04270 IPR037060 Catalase core domain superfamily LIT28_04270 IPR011614 Catalase core domain LIT28_04270 IPR018028 Catalase, mono-functional, haem-containing LIT28_04270 IPR024708 Catalase active site LIT28_04280 IPR002293 Amino acid/polyamine transporter I LIT28_04285 IPR015942 Asp/Glu/hydantoin racemase LIT28_04285 IPR001920 Asp/Glu racemase LIT28_04285 IPR018187 Asp/Glu racemase, active site 1 LIT28_04285 IPR033134 Asp/Glu racemase, active site 2 LIT28_04285 IPR004391 Glutamate racemase LIT28_04295 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_04295 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_04295 IPR016160 Aldehyde dehydrogenase, cysteine active site LIT28_04295 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_04295 IPR015590 Aldehyde dehydrogenase domain LIT28_04300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_04300 IPR039421 Type I protein exporter LIT28_04300 IPR003439 ABC transporter-like LIT28_04300 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_04300 IPR003593 AAA+ ATPase domain LIT28_04300 IPR011527 ABC transporter type 1, transmembrane domain LIT28_04300 IPR017871 ABC transporter, conserved site LIT28_04305 IPR039421 Type I protein exporter LIT28_04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_04305 IPR011527 ABC transporter type 1, transmembrane domain LIT28_04305 IPR003439 ABC transporter-like LIT28_04305 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_04305 IPR003593 AAA+ ATPase domain LIT28_04305 IPR017871 ABC transporter, conserved site LIT28_04310 IPR018313 Solute-binding protein family 3, conserved site LIT28_04310 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LIT28_04315 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LIT28_04315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_04315 IPR035906 MetI-like superfamily LIT28_04320 IPR003593 AAA+ ATPase domain LIT28_04320 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LIT28_04320 IPR003439 ABC transporter-like LIT28_04320 IPR017871 ABC transporter, conserved site LIT28_04320 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_04325 IPR038300 SASP, alpha/beta-type superfamily LIT28_04325 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_04325 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_04335 IPR026838 Endospore coat-associated protein YheC/D LIT28_04345 IPR007383 Protein of unknown function DUF445 LIT28_04345 IPR016991 Protein of unknown function UCP032178 LIT28_04350 IPR010368 Control of competence regulator ComK, YlbF/YmcA LIT28_04350 IPR023378 YheA/YmcA-like domain superfamily LIT28_04365 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LIT28_04365 IPR000399 TPP-binding enzyme, conserved site LIT28_04365 IPR012782 Acetolactate synthase, catabolic LIT28_04365 IPR012000 Thiamine pyrophosphate enzyme, central domain LIT28_04365 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIT28_04365 IPR029061 Thiamin diphosphate-binding fold LIT28_04365 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LIT28_04370 IPR005128 Alpha-acetolactate decarboxylase LIT28_04375 IPR011034 Formyl transferase-like, C-terminal domain superfamily LIT28_04375 IPR003180 Methylpurine-DNA glycosylase LIT28_04375 IPR036995 Methylpurine-DNA glycosylase superfamily LIT28_04380 IPR000150 Cof family LIT28_04380 IPR036412 HAD-like superfamily LIT28_04380 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_04380 IPR023214 HAD superfamily LIT28_04390 IPR036366 PGBD superfamily LIT28_04390 IPR036365 PGBD-like superfamily LIT28_04390 IPR002477 Peptidoglycan binding-like LIT28_04390 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily LIT28_04390 IPR002502 N-acetylmuramoyl-L-alanine amidase domain LIT28_04395 IPR034505 Anaerobic coproporphyrinogen-III oxidase LIT28_04395 IPR006638 Elp3/MiaB/NifB LIT28_04395 IPR007197 Radical SAM LIT28_04395 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ LIT28_04395 IPR023404 Radical SAM, alpha/beta horseshoe LIT28_04400 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_04400 IPR020845 AMP-binding, conserved site LIT28_04400 IPR000873 AMP-dependent synthetase/ligase LIT28_04410 IPR001902 SLC26A/SulP transporter LIT28_04410 IPR002645 STAS domain LIT28_04410 IPR036513 STAS domain superfamily LIT28_04410 IPR011547 SLC26A/SulP transporter domain LIT28_04425 IPR011116 SecA Wing/Scaffold LIT28_04425 IPR036670 SecA, preprotein cross-linking domain superfamily LIT28_04425 IPR036266 SecA, Wing/Scaffold superfamily LIT28_04425 IPR011115 SecA DEAD-like, N-terminal LIT28_04425 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_04425 IPR014018 SecA motor DEAD LIT28_04425 IPR011130 SecA, preprotein cross-linking domain LIT28_04425 IPR000185 Protein translocase subunit SecA LIT28_04425 IPR020937 SecA conserved site LIT28_04425 IPR030908 Protein translocase subunit SecA 2, Bacillus anthracis-type LIT28_04430 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type LIT28_04430 IPR002797 Polysaccharide biosynthesis protein LIT28_04430 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LIT28_04440 IPR008964 Invasin/intimin cell-adhesion fragments LIT28_04440 IPR032812 SbsA, Ig-like domain LIT28_04440 IPR001119 S-layer homology domain LIT28_04440 IPR003343 Bacterial Ig-like, group 2 LIT28_04445 IPR001119 S-layer homology domain LIT28_04455 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB LIT28_04455 IPR004299 Membrane bound O-acyl transferase, MBOAT LIT28_04455 IPR028362 Alginate O-acetyltransferase AlgI LIT28_04465 IPR029045 ClpP/crotonase-like domain superfamily LIT28_04465 IPR001753 Enoyl-CoA hydratase/isomerase LIT28_04465 IPR014748 Enoyl-CoA hydratase, C-terminal LIT28_04485 IPR008007 Peptidase M42 LIT28_04485 IPR023367 Peptidase M42, domain 2 LIT28_04490 IPR001119 S-layer homology domain LIT28_04490 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LIT28_04495 IPR036397 Ribonuclease H superfamily LIT28_04495 IPR025948 HTH-like domain LIT28_04495 IPR038965 Transposase InsF-like LIT28_04495 IPR012337 Ribonuclease H-like superfamily LIT28_04495 IPR001584 Integrase, catalytic core LIT28_04510 IPR022580 Protein of unknown function DUF2639 LIT28_04515 IPR008794 Proline racemase family LIT28_04520 IPR023401 Ornithine cyclodeaminase, N-terminal LIT28_04520 IPR003462 Ornithine cyclodeaminase/mu-crystallin LIT28_04520 IPR036291 NAD(P)-binding domain superfamily LIT28_04525 IPR006160 Short chain fatty acid transporter AtoE LIT28_04525 IPR006161 Conserved hypothetical protein CHP00336 LIT28_04530 IPR005828 Major facilitator, sugar transporter-like LIT28_04530 IPR004736 MFS transporter, metabolite:H symporter LIT28_04530 IPR005829 Sugar transporter, conserved site LIT28_04530 IPR020846 Major facilitator superfamily domain LIT28_04530 IPR036259 MFS transporter superfamily LIT28_04535 IPR039506 SpoOB, alpha-helical domain LIT28_04535 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB LIT28_04535 IPR005467 Histidine kinase domain LIT28_04535 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_04535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_04535 IPR035965 PAS domain superfamily LIT28_04535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_04535 IPR029151 Periplasmic sensor-like domain superfamily LIT28_04540 IPR011006 CheY-like superfamily LIT28_04540 IPR001789 Signal transduction response regulator, receiver domain LIT28_04540 IPR013196 Helix-turn-helix, type 11 LIT28_04540 IPR024187 Signal transduction response regulator, citrate/malate metabolism LIT28_04540 IPR028141 Transcriptional regulator LIT28_04545 IPR042100 Bordetella uptake gene, domain 1 LIT28_04545 IPR005064 Bordetella uptake gene LIT28_04550 IPR003561 Mutator MutT LIT28_04550 IPR020084 NUDIX hydrolase, conserved site LIT28_04550 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_04550 IPR020476 NUDIX hydrolase LIT28_04550 IPR000086 NUDIX hydrolase domain LIT28_04555 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_04555 IPR006935 Helicase/UvrB, N-terminal LIT28_04555 IPR013670 EcoEI R protein C-terminal domain LIT28_04555 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_04555 IPR029464 Type I restriction enzyme R protein, N-terminal domain LIT28_04555 IPR001650 Helicase, C-terminal LIT28_04565 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_04565 IPR011332 Zinc-binding ribosomal protein LIT28_04565 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_04565 IPR006935 Helicase/UvrB, N-terminal LIT28_04565 IPR001650 Helicase, C-terminal LIT28_04600 IPR003593 AAA+ ATPase domain LIT28_04600 IPR007692 DNA helicase, DnaB type LIT28_04600 IPR007694 DNA helicase, DnaB-like, C-terminal LIT28_04600 IPR007693 DNA helicase, DnaB-like, N-terminal LIT28_04600 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LIT28_04600 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_04600 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily LIT28_04610 IPR002781 Transmembrane protein TauE-like LIT28_04625 IPR004638 Drug resistance transporter EmrB-like LIT28_04625 IPR020846 Major facilitator superfamily domain LIT28_04625 IPR036259 MFS transporter superfamily LIT28_04625 IPR011701 Major facilitator superfamily LIT28_04670 IPR025948 HTH-like domain LIT28_04670 IPR038965 Transposase InsF-like LIT28_04670 IPR001584 Integrase, catalytic core LIT28_04670 IPR012337 Ribonuclease H-like superfamily LIT28_04670 IPR036397 Ribonuclease H superfamily LIT28_04715 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase LIT28_04715 IPR000462 CDP-alcohol phosphatidyltransferase LIT28_04740 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 LIT28_04740 IPR004006 DhaK domain LIT28_04750 IPR004006 DhaK domain LIT28_04750 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 LIT28_04755 IPR023048 NADH-azoreductase, FMN-dependent LIT28_04755 IPR029039 Flavoprotein-like superfamily LIT28_04755 IPR003680 Flavodoxin-like fold LIT28_04760 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_04760 IPR000944 Transcription regulator Rrf2-type LIT28_04760 IPR030489 Transcription regulator Rrf2-type, conserved site LIT28_04760 IPR036390 Winged helix DNA-binding domain superfamily LIT28_04780 IPR006674 HD domain LIT28_04780 IPR003660 HAMP domain LIT28_04780 IPR003607 HD/PDEase domain LIT28_04780 IPR037522 HD-GYP domain LIT28_04800 IPR036661 Luciferase-like domain superfamily LIT28_04800 IPR011251 Luciferase-like domain LIT28_04800 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG LIT28_04810 IPR036390 Winged helix DNA-binding domain superfamily LIT28_04810 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_04810 IPR000847 Transcription regulator HTH, LysR LIT28_04810 IPR005119 LysR, substrate-binding LIT28_04815 IPR000620 EamA domain LIT28_04820 IPR001119 S-layer homology domain LIT28_04840 IPR017853 Glycoside hydrolase superfamily LIT28_04840 IPR005086 Carbohydrate binding module family 17/28 LIT28_04840 IPR008979 Galactose-binding-like domain superfamily LIT28_04840 IPR001547 Glycoside hydrolase, family 5 LIT28_04840 IPR018087 Glycoside hydrolase, family 5, conserved site LIT28_04840 IPR001119 S-layer homology domain LIT28_04860 IPR003593 AAA+ ATPase domain LIT28_04860 IPR003439 ABC transporter-like LIT28_04860 IPR017871 ABC transporter, conserved site LIT28_04860 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_04865 IPR027022 ABC transporter permease protein, BceB-type LIT28_04865 IPR003838 ABC transporter permease protein domain LIT28_04890 IPR025889 General stress protein 17M-like domain LIT28_04895 IPR036629 YjbJ superfamily LIT28_04895 IPR008462 CsbD-like domain LIT28_04910 IPR036513 STAS domain superfamily LIT28_04910 IPR002645 STAS domain LIT28_04910 IPR003658 Anti-sigma factor antagonist LIT28_04915 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_04915 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_04915 IPR010193 Serine-protein kinase RsbW LIT28_04920 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_04920 IPR007627 RNA polymerase sigma-70 region 2 LIT28_04920 IPR013325 RNA polymerase sigma factor, region 2 LIT28_04920 IPR007630 RNA polymerase sigma-70 region 4 LIT28_04920 IPR007624 RNA polymerase sigma-70 region 3 LIT28_04920 IPR000943 RNA polymerase sigma-70 LIT28_04920 IPR014322 RNA polymerase sigma-B/F/G type LIT28_04920 IPR014288 RNA polymerase sigma-B factor LIT28_04920 IPR014284 RNA polymerase sigma-70 like domain LIT28_04930 IPR000014 PAS domain LIT28_04930 IPR035965 PAS domain superfamily LIT28_04930 IPR036457 PPM-type phosphatase domain superfamily LIT28_04930 IPR001932 PPM-type phosphatase domain LIT28_04935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_04935 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LIT28_04935 IPR000780 MCP methyltransferase, CheR-type LIT28_04935 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LIT28_04940 IPR011006 CheY-like superfamily LIT28_04940 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_04940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_04940 IPR005467 Histidine kinase domain LIT28_04940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_04940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_04940 IPR036641 HPT domain superfamily LIT28_04940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_04940 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LIT28_04940 IPR001789 Signal transduction response regulator, receiver domain LIT28_04940 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LIT28_04965 IPR002765 Uncharacterised protein family UPF0145 LIT28_04965 IPR035439 UPF0145 domain superfamily LIT28_04975 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_04975 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_04975 IPR023921 Alcohol dehydrogenase, zinc-type, actinomycetes LIT28_04975 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LIT28_04975 IPR011032 GroES-like superfamily LIT28_04975 IPR036291 NAD(P)-binding domain superfamily LIT28_04975 IPR020843 Polyketide synthase, enoylreductase domain LIT28_04980 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_04980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_04980 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LIT28_04985 IPR000792 Transcription regulator LuxR, C-terminal LIT28_04985 IPR001789 Signal transduction response regulator, receiver domain LIT28_04985 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_04985 IPR011006 CheY-like superfamily LIT28_05000 IPR022580 Protein of unknown function DUF2639 LIT28_05015 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_05015 IPR029052 Metallo-dependent phosphatase-like LIT28_05015 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain LIT28_05015 IPR014576 Predicted phosphoesterase, YhaO type LIT28_05020 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_05020 IPR038734 Uncharacterized protein YhaN, AAA domain LIT28_05025 IPR003607 HD/PDEase domain LIT28_05025 IPR006674 HD domain LIT28_05025 IPR012340 Nucleic acid-binding, OB-fold LIT28_05025 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LIT28_05025 IPR020873 3'-5' exoribonuclease YhaM LIT28_05055 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_05055 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_05055 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_05060 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_05060 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_05060 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_05065 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal LIT28_05065 IPR000073 Alpha/beta hydrolase fold-1 LIT28_05065 IPR029058 Alpha/Beta hydrolase fold LIT28_05065 IPR000639 Epoxide hydrolase-like LIT28_05070 IPR025428 Sporulation protein YhaL LIT28_05085 IPR006699 Glycerol uptake operon antiterminator LIT28_05085 IPR035928 GlpP-like superfamily LIT28_05090 IPR000425 Major intrinsic protein LIT28_05090 IPR022357 Major intrinsic protein, conserved site LIT28_05090 IPR023271 Aquaporin-like LIT28_05095 IPR000577 Carbohydrate kinase, FGGY LIT28_05095 IPR018485 Carbohydrate kinase, FGGY, C-terminal LIT28_05095 IPR018484 Carbohydrate kinase, FGGY, N-terminal LIT28_05095 IPR005999 Glycerol kinase LIT28_05095 IPR018483 Carbohydrate kinase, FGGY, conserved site LIT28_05100 IPR031656 Alpha-glycerophosphate oxidase, C-terminal LIT28_05100 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily LIT28_05100 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_05100 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase LIT28_05100 IPR006076 FAD dependent oxidoreductase LIT28_05105 IPR019270 Protein of unknown function DUF2283 LIT28_05105 IPR016789 Uncharacterised conserved protein UCP021389 LIT28_05110 IPR007627 RNA polymerase sigma-70 region 2 LIT28_05110 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_05110 IPR014286 RNA polymerase sigma-70 RpoE type LIT28_05110 IPR013325 RNA polymerase sigma factor, region 2 LIT28_05110 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_05110 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_05110 IPR014284 RNA polymerase sigma-70 like domain LIT28_05110 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LIT28_05110 IPR039425 RNA polymerase sigma-70 like LIT28_05120 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB LIT28_05120 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LIT28_05120 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LIT28_05135 IPR036259 MFS transporter superfamily LIT28_05135 IPR020846 Major facilitator superfamily domain LIT28_05135 IPR011701 Major facilitator superfamily LIT28_05140 IPR004638 Drug resistance transporter EmrB-like LIT28_05140 IPR011701 Major facilitator superfamily LIT28_05140 IPR020846 Major facilitator superfamily domain LIT28_05140 IPR036259 MFS transporter superfamily LIT28_05150 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_05150 IPR027785 UvrD-like helicase C-terminal domain LIT28_05150 IPR014016 UvrD-like helicase, ATP-binding domain LIT28_05150 IPR000212 DNA helicase, UvrD/REP type LIT28_05155 IPR023059 Foldase protein PrsA LIT28_05155 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LIT28_05155 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LIT28_05155 IPR027304 Trigger factor/SurA domain superfamily LIT28_05170 IPR036390 Winged helix DNA-binding domain superfamily LIT28_05170 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_05170 IPR023187 Transcriptional regulator MarR-type, conserved site LIT28_05170 IPR000835 MarR-type HTH domain LIT28_05170 IPR023488 HTH-type transcriptional regulator Hpr LIT28_05175 IPR036191 RRF superfamily LIT28_05175 IPR024623 Uncharacterised protein family YtxH LIT28_05180 IPR011146 HIT-like domain LIT28_05180 IPR036265 HIT-like superfamily LIT28_05180 IPR001310 Histidine triad (HIT) protein LIT28_05180 IPR039384 HINT family LIT28_05180 IPR019808 Histidine triad, conserved site LIT28_05185 IPR003593 AAA+ ATPase domain LIT28_05185 IPR003439 ABC transporter-like LIT28_05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_05190 IPR010288 Bacterial ABC transporter EcsB LIT28_05195 IPR024787 EcsC protein LIT28_05220 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_05220 IPR001647 DNA-binding HTH domain, TetR-type LIT28_05220 IPR041603 YvdT, C-terminal LIT28_05220 IPR009057 Homeobox-like domain superfamily LIT28_05230 IPR005182 Domain of unknown function DUF304 LIT28_05235 IPR005182 Domain of unknown function DUF304 LIT28_05235 IPR014529 Uncharacterised conserved protein UCP026631 LIT28_05270 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_05270 IPR018372 Chloramphenicol acetyltransferase, active site LIT28_05270 IPR001707 Chloramphenicol acetyltransferase LIT28_05275 IPR000551 MerR-type HTH domain LIT28_05275 IPR009061 Putative DNA-binding domain superfamily LIT28_05275 IPR011789 Cu(I)-responsive transcriptional regulator LIT28_05285 IPR005182 Domain of unknown function DUF304 LIT28_05290 IPR014529 Uncharacterised conserved protein UCP026631 LIT28_05290 IPR005182 Domain of unknown function DUF304 LIT28_05295 IPR007138 Antibiotic biosynthesis monooxygenase domain LIT28_05295 IPR011008 Dimeric alpha-beta barrel LIT28_05300 IPR001460 Penicillin-binding protein, transpeptidase LIT28_05300 IPR012338 Beta-lactamase/transpeptidase-like LIT28_05300 IPR023346 Lysozyme-like domain superfamily LIT28_05300 IPR001264 Glycosyl transferase, family 51 LIT28_05300 IPR036950 Penicillin binding protein transglycosylase domain LIT28_05305 IPR006361 Uroporphyrinogen decarboxylase HemE LIT28_05305 IPR000257 Uroporphyrinogen decarboxylase (URO-D) LIT28_05305 IPR038071 UROD/MetE-like superfamily LIT28_05310 IPR001015 Ferrochelatase LIT28_05310 IPR019772 Ferrochelatase, active site LIT28_05310 IPR033644 Ferrochelatase, C-terminal LIT28_05310 IPR033659 Ferrochelatase, N-terminal LIT28_05315 IPR002937 Amine oxidase LIT28_05315 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_05315 IPR004572 Protoporphyrinogen oxidase LIT28_05340 IPR036390 Winged helix DNA-binding domain superfamily LIT28_05340 IPR005650 BlaI transcriptional regulatory family LIT28_05340 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_05350 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_05350 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal LIT28_05350 IPR001647 DNA-binding HTH domain, TetR-type LIT28_05350 IPR009057 Homeobox-like domain superfamily LIT28_05350 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_05355 IPR017501 Phage infection protein, YhgE, C-terminal LIT28_05355 IPR017500 Phage infection protein, YhgE, N-terminal LIT28_05355 IPR023908 xxxLxxG heptad repeat LIT28_05385 IPR036390 Winged helix DNA-binding domain superfamily LIT28_05385 IPR013196 Helix-turn-helix, type 11 LIT28_05385 IPR001034 DeoR-type HTH domain LIT28_05385 IPR026881 WYL domain LIT28_05385 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_05385 IPR028349 Protein PafC LIT28_05390 IPR028082 Periplasmic binding protein-like I LIT28_05390 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_05390 IPR000843 LacI-type HTH domain LIT28_05395 IPR025432 YhfH-like protein LIT28_05400 IPR001279 Metallo-beta-lactamase LIT28_05400 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_05405 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LIT28_05405 IPR019491 Lipoate protein ligase, C-terminal LIT28_05405 IPR004562 Lipoyltransferase/lipoate-protein ligase LIT28_05415 IPR020845 AMP-binding, conserved site LIT28_05415 IPR000873 AMP-dependent synthetase/ligase LIT28_05415 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_05415 IPR042099 AMP-dependent synthetase-like superfamily LIT28_05415 IPR020459 AMP-binding LIT28_05425 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LIT28_05425 IPR001119 S-layer homology domain LIT28_05445 IPR029052 Metallo-dependent phosphatase-like LIT28_05445 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_05450 IPR006674 HD domain LIT28_05450 IPR003607 HD/PDEase domain LIT28_05460 IPR038965 Transposase InsF-like LIT28_05460 IPR012337 Ribonuclease H-like superfamily LIT28_05460 IPR036397 Ribonuclease H superfamily LIT28_05460 IPR001584 Integrase, catalytic core LIT28_05460 IPR025948 HTH-like domain LIT28_05470 IPR007627 RNA polymerase sigma-70 region 2 LIT28_05470 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LIT28_05470 IPR014296 RNA polymerase sigma-M, bacillaceae LIT28_05470 IPR014284 RNA polymerase sigma-70 like domain LIT28_05470 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_05470 IPR039425 RNA polymerase sigma-70 like LIT28_05470 IPR013325 RNA polymerase sigma factor, region 2 LIT28_05470 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_05470 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_05475 IPR018062 HTH domain AraC-type, conserved site LIT28_05475 IPR009057 Homeobox-like domain superfamily LIT28_05475 IPR018060 DNA binding HTH domain, AraC-type LIT28_05475 IPR011256 Regulatory factor, effector binding domain superfamily LIT28_05475 IPR020449 Transcription regulator HTH, AraC- type LIT28_05475 IPR029442 GyrI-like small molecule binding domain LIT28_05475 IPR010499 Bacterial transcription activator, effector binding LIT28_05485 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_05485 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_05485 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_05485 IPR005467 Histidine kinase domain LIT28_05485 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_05485 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_05490 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_05490 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_05490 IPR001789 Signal transduction response regulator, receiver domain LIT28_05490 IPR039420 Transcriptional regulatory protein WalR-like LIT28_05490 IPR011006 CheY-like superfamily LIT28_05490 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_05515 IPR032456 CAAX prenyl protease 1, N-terminal LIT28_05515 IPR001915 Peptidase M48 LIT28_05515 IPR027057 CAAX prenyl protease 1 LIT28_05520 IPR033479 Double Cache domain 1 LIT28_05520 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding LIT28_05520 IPR003660 HAMP domain LIT28_05520 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_05520 IPR029151 Periplasmic sensor-like domain superfamily LIT28_05525 IPR000620 EamA domain LIT28_05530 IPR018087 Glycoside hydrolase, family 5, conserved site LIT28_05530 IPR005086 Carbohydrate binding module family 17/28 LIT28_05530 IPR017853 Glycoside hydrolase superfamily LIT28_05530 IPR008979 Galactose-binding-like domain superfamily LIT28_05530 IPR001119 S-layer homology domain LIT28_05530 IPR001547 Glycoside hydrolase, family 5 LIT28_05540 IPR001119 S-layer homology domain LIT28_05545 IPR019830 Malate synthase, conserved site LIT28_05545 IPR001465 Malate synthase LIT28_05545 IPR006252 Malate synthase A LIT28_05545 IPR011076 Malate synthase-like superfamily LIT28_05550 IPR040442 Pyruvate kinase-like domain superfamily LIT28_05550 IPR039556 ICL/PEPM domain LIT28_05550 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site LIT28_05550 IPR006254 Isocitrate lyase LIT28_05550 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIT28_05565 IPR002059 Cold-shock protein, DNA-binding LIT28_05565 IPR019844 Cold-shock (CSD) domain LIT28_05565 IPR012340 Nucleic acid-binding, OB-fold LIT28_05565 IPR012156 Cold shock, CspA LIT28_05565 IPR011129 Cold shock domain LIT28_05580 IPR010461 Competence protein ComK LIT28_05585 IPR015414 Transmembrane protein TMEM64 LIT28_05585 IPR032816 SNARE associated Golgi protein LIT28_05590 IPR019756 Peptidase S26A, signal peptidase I, serine active site LIT28_05590 IPR019533 Peptidase S26 LIT28_05590 IPR036286 LexA/Signal peptidase-like superfamily LIT28_05590 IPR000223 Peptidase S26A, signal peptidase I LIT28_05590 IPR019758 Peptidase S26A, signal peptidase I, conserved site LIT28_05590 IPR019757 Peptidase S26A, signal peptidase I, lysine active site LIT28_05595 IPR014016 UvrD-like helicase, ATP-binding domain LIT28_05595 IPR014140 DNA helicase subunit AddB LIT28_05595 IPR014017 UvrD-like DNA helicase, C-terminal LIT28_05595 IPR000212 DNA helicase, UvrD/REP type LIT28_05595 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_05595 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type LIT28_05600 IPR014016 UvrD-like helicase, ATP-binding domain LIT28_05600 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type LIT28_05600 IPR034739 UvrD/AddA helicase, N-terminal LIT28_05600 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_05600 IPR011335 Restriction endonuclease type II-like LIT28_05600 IPR014152 DNA helicase subunit AddA LIT28_05600 IPR014017 UvrD-like DNA helicase, C-terminal LIT28_05600 IPR000212 DNA helicase, UvrD/REP type LIT28_05600 IPR011604 Exonuclease, phage-type/RecB, C-terminal LIT28_05610 IPR019618 Spore germination protein GerPA/GerPF LIT28_05615 IPR024496 Spore germination protein GerPE LIT28_05620 IPR017257 Spore germination protein GerPD, predicted LIT28_05625 IPR019673 Spore germination protein GerPC LIT28_05630 IPR024255 Spore germination GerPB LIT28_05635 IPR019618 Spore germination protein GerPA/GerPF LIT28_05640 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like LIT28_05640 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily LIT28_05645 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily LIT28_05645 IPR011234 Fumarylacetoacetase-like, C-terminal LIT28_05655 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_05655 IPR034757 Ornithine aminotransferase, bacterial type LIT28_05655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_05655 IPR005814 Aminotransferase class-III LIT28_05655 IPR010164 Ornithine aminotransferase LIT28_05655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_05660 IPR010899 Protein of unknown function UPF0344 LIT28_05670 IPR017932 Glutamine amidotransferase type 2 domain LIT28_05670 IPR033738 Asparagine synthase, N-terminal domain LIT28_05670 IPR001962 Asparagine synthase LIT28_05670 IPR006426 Asparagine synthase, glutamine-hydrolyzing LIT28_05670 IPR029055 Nucleophile aminohydrolases, N-terminal LIT28_05675 IPR033659 Ferrochelatase, N-terminal LIT28_05675 IPR033644 Ferrochelatase, C-terminal LIT28_05675 IPR001015 Ferrochelatase LIT28_05675 IPR019772 Ferrochelatase, active site LIT28_05680 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 LIT28_05680 IPR018028 Catalase, mono-functional, haem-containing LIT28_05680 IPR024708 Catalase active site LIT28_05680 IPR010582 Catalase immune-responsive domain LIT28_05680 IPR020835 Catalase superfamily LIT28_05680 IPR011614 Catalase core domain LIT28_05680 IPR037060 Catalase core domain superfamily LIT28_05680 IPR002226 Catalase haem-binding site LIT28_05685 IPR024041 Ammonium transporter AmtB-like domain LIT28_05685 IPR001905 Ammonium transporter LIT28_05685 IPR029020 Ammonium/urea transporter LIT28_05685 IPR018047 Ammonium transporter, conserved site LIT28_05690 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LIT28_05690 IPR017853 Glycoside hydrolase superfamily LIT28_05705 IPR007551 Protein of unknown function DUF520 LIT28_05705 IPR035571 UPF0234-like, C-terminal LIT28_05705 IPR035570 UPF0234, N-terminal LIT28_05705 IPR036183 YajQ-like superfamily LIT28_05710 IPR022967 RNA-binding domain, S1 LIT28_05710 IPR012340 Nucleic acid-binding, OB-fold LIT28_05710 IPR040764 Conserved virulence factor B-like, winged helix domain LIT28_05710 IPR039566 Conserved virulence factor B, S1 domain LIT28_05710 IPR014464 Conserved virulence factor B LIT28_05710 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_05710 IPR003029 S1 domain LIT28_05715 IPR023059 Foldase protein PrsA LIT28_05715 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LIT28_05715 IPR027304 Trigger factor/SurA domain superfamily LIT28_05715 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LIT28_05725 IPR003740 Uncharacterised membrane protein YitT LIT28_05725 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_05725 IPR019264 Domain of unknown function DUF2179 LIT28_05730 IPR024217 Protein of unknown function DUF3813 LIT28_05740 IPR000150 Cof family LIT28_05740 IPR036412 HAD-like superfamily LIT28_05740 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_05740 IPR023214 HAD superfamily LIT28_05745 IPR025549 YjzC-like protein LIT28_05750 IPR003959 ATPase, AAA-type, core LIT28_05750 IPR003593 AAA+ ATPase domain LIT28_05750 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_05750 IPR028299 ClpA/B, conserved site 2 LIT28_05750 IPR019489 Clp ATPase, C-terminal LIT28_05750 IPR036628 Clp, N-terminal domain superfamily LIT28_05750 IPR004176 Clp, N-terminal LIT28_05750 IPR001270 ClpA/B family LIT28_05750 IPR018368 ClpA/B, conserved site 1 LIT28_05750 IPR017730 Chaperonin ClpB LIT28_05750 IPR041546 ClpA/ClpB, AAA lid domain LIT28_05760 IPR029058 Alpha/Beta hydrolase fold LIT28_05770 IPR024558 ComZ LIT28_05775 IPR016039 Thiolase-like LIT28_05775 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LIT28_05775 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LIT28_05775 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIT28_05780 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 LIT28_05780 IPR018201 Beta-ketoacyl synthase, active site LIT28_05780 IPR014031 Beta-ketoacyl synthase, C-terminal LIT28_05780 IPR014030 Beta-ketoacyl synthase, N-terminal LIT28_05780 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LIT28_05780 IPR016039 Thiolase-like LIT28_05780 IPR000794 Beta-ketoacyl synthase LIT28_05785 IPR018728 Domain of unknown function DUF2268 LIT28_05790 IPR020909 UPF0736 LIT28_05795 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_05795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_05795 IPR002305 Aminoacyl-tRNA synthetase, class Ic LIT28_05795 IPR024109 Tryptophan-tRNA ligase, bacterial-type LIT28_05795 IPR002306 Tryptophan-tRNA ligase LIT28_05805 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_05805 IPR039424 Solute-binding protein family 5 LIT28_05805 IPR000914 Solute-binding protein family 5 domain LIT28_05805 IPR023765 Solute-binding protein family 5, conserved site LIT28_05810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_05810 IPR035906 MetI-like superfamily LIT28_05815 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LIT28_05815 IPR035906 MetI-like superfamily LIT28_05815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_05820 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_05820 IPR003593 AAA+ ATPase domain LIT28_05820 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_05820 IPR017871 ABC transporter, conserved site LIT28_05820 IPR003439 ABC transporter-like LIT28_05825 IPR003593 AAA+ ATPase domain LIT28_05825 IPR003439 ABC transporter-like LIT28_05825 IPR017871 ABC transporter, conserved site LIT28_05825 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_05825 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_05830 IPR002528 Multi antimicrobial extrusion protein LIT28_05835 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_05835 IPR000914 Solute-binding protein family 5 domain LIT28_05835 IPR023765 Solute-binding protein family 5, conserved site LIT28_05835 IPR039424 Solute-binding protein family 5 LIT28_05845 IPR006660 Arsenate reductase-like LIT28_05845 IPR023731 Regulatory protein Spx LIT28_05845 IPR036249 Thioredoxin-like superfamily LIT28_05845 IPR006504 Transcriptional regulator Spx/MgsR LIT28_05850 IPR022301 Integral membrane protein YjbE LIT28_05850 IPR005496 Integral membrane protein TerC LIT28_05855 IPR008681 Negative regulator of genetic competence, MecA LIT28_05855 IPR038471 MecA, C-terminal domain superfamily LIT28_05860 IPR001736 Phospholipase D/Transphosphatidylase LIT28_05860 IPR030874 Cardiolipin synthase, Firmicutes-type LIT28_05860 IPR027379 Cardiolipin synthase N-terminal LIT28_05860 IPR025202 Phospholipase D-like domain LIT28_05860 IPR022924 Cardiolipin synthase LIT28_05870 IPR004438 Peptidase M3B, oligoendopeptidase F LIT28_05870 IPR001567 Peptidase M3A/M3B catalytic domain LIT28_05870 IPR042088 Oligoendopeptidase F, C-terminal domain LIT28_05870 IPR013647 Oligopeptidase F, N-terminal domain LIT28_05880 IPR036249 Thioredoxin-like superfamily LIT28_05885 IPR009050 Globin-like superfamily LIT28_05885 IPR001486 Truncated hemoglobin LIT28_05885 IPR019795 Globin, bacterial-like, conserved site LIT28_05885 IPR012292 Globin/Protoglobin LIT28_05890 IPR033469 CYTH-like domain superfamily LIT28_05890 IPR009195 Uncharacterised protein family YjbK LIT28_05890 IPR023577 CYTH domain LIT28_05895 IPR020908 Uncharacterised protein family UPF0738 LIT28_05900 IPR007685 RelA/SpoT LIT28_05905 IPR002504 NAD kinase LIT28_05905 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal LIT28_05905 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal LIT28_05905 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily LIT28_05910 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_05910 IPR006225 Pseudouridine synthase, RluC/RluD LIT28_05910 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LIT28_05910 IPR006145 Pseudouridine synthase, RsuA/RluA LIT28_05910 IPR002942 RNA-binding S4 domain LIT28_05920 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_05920 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE LIT28_05920 IPR029052 Metallo-dependent phosphatase-like LIT28_05920 IPR041780 PrpE-like, metallophosphatase domain LIT28_05925 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB LIT28_05925 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LIT28_05925 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LIT28_05930 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_05930 IPR001173 Glycosyltransferase 2-like LIT28_05935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_05935 IPR013216 Methyltransferase type 11 LIT28_05940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_05940 IPR008884 Macrocin-O-methyltransferase LIT28_05950 IPR001173 Glycosyltransferase 2-like LIT28_05950 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_05950 IPR013026 Tetratricopeptide repeat-containing domain LIT28_05950 IPR011990 Tetratricopeptide-like helical domain superfamily LIT28_05950 IPR019734 Tetratricopeptide repeat LIT28_05970 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form LIT28_05970 IPR005835 Nucleotidyl transferase domain LIT28_05970 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_05975 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related LIT28_05975 IPR011051 RmlC-like cupin domain superfamily LIT28_05975 IPR014710 RmlC-like jelly roll fold LIT28_05980 IPR005888 dTDP-glucose 4,6-dehydratase LIT28_05980 IPR036291 NAD(P)-binding domain superfamily LIT28_05980 IPR016040 NAD(P)-binding domain LIT28_05985 IPR029903 RmlD-like substrate binding domain LIT28_05985 IPR036291 NAD(P)-binding domain superfamily LIT28_05985 IPR005913 dTDP-4-dehydrorhamnose reductase family LIT28_05990 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) LIT28_05990 IPR036291 NAD(P)-binding domain superfamily LIT28_05990 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_06000 IPR019593 Spore coat protein Z/Y LIT28_06005 IPR010773 Mycobacterium phage PG1, Gp7 LIT28_06025 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_06025 IPR005751 ATP-dependent DNA helicase PcrA LIT28_06025 IPR014017 UvrD-like DNA helicase, C-terminal LIT28_06025 IPR000212 DNA helicase, UvrD/REP type LIT28_06025 IPR014016 UvrD-like helicase, ATP-binding domain LIT28_06025 IPR013986 DExx box DNA helicase domain superfamily LIT28_06025 IPR034739 UvrD/AddA helicase, N-terminal LIT28_06030 IPR016181 Acyl-CoA N-acyltransferase LIT28_06030 IPR039143 Glucosamine 6-phosphate N-acetyltransferase LIT28_06030 IPR000182 GNAT domain LIT28_06035 IPR022932 Putative phosphoesterase YjcG LIT28_06035 IPR009097 Cyclic phosphodiesterase LIT28_06040 IPR000801 Putative esterase LIT28_06040 IPR029058 Alpha/Beta hydrolase fold LIT28_06055 IPR003343 Bacterial Ig-like, group 2 LIT28_06055 IPR008964 Invasin/intimin cell-adhesion fragments LIT28_06060 IPR018212 Sodium/solute symporter, conserved site LIT28_06060 IPR011851 Sodium/proline symporter LIT28_06060 IPR001734 Sodium/solute symporter LIT28_06060 IPR038377 Sodium/glucose symporter superfamily LIT28_06065 IPR006805 Anthranilate synthase component I, N-terminal LIT28_06065 IPR015890 Chorismate-utilising enzyme, C-terminal LIT28_06065 IPR005256 Anthranilate synthase component I, PabB-like LIT28_06065 IPR019999 Anthranilate synthase component I-like LIT28_06065 IPR005801 ADC synthase LIT28_06070 IPR017459 Glycosyl transferase family 3, N-terminal domain LIT28_06070 IPR029062 Class I glutamine amidotransferase-like LIT28_06070 IPR005940 Anthranilate phosphoribosyl transferase LIT28_06070 IPR017926 Glutamine amidotransferase LIT28_06070 IPR000312 Glycosyl transferase, family 3 LIT28_06070 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LIT28_06070 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain LIT28_06070 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LIT28_06075 IPR005940 Anthranilate phosphoribosyl transferase LIT28_06075 IPR000312 Glycosyl transferase, family 3 LIT28_06075 IPR017459 Glycosyl transferase family 3, N-terminal domain LIT28_06075 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LIT28_06075 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LIT28_06080 IPR013785 Aldolase-type TIM barrel LIT28_06080 IPR011060 Ribulose-phosphate binding barrel LIT28_06080 IPR001468 Indole-3-glycerol phosphate synthase, conserved site LIT28_06080 IPR013798 Indole-3-glycerol phosphate synthase LIT28_06085 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) LIT28_06085 IPR013785 Aldolase-type TIM barrel LIT28_06085 IPR011060 Ribulose-phosphate binding barrel LIT28_06090 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_06090 IPR023026 Tryptophan synthase beta chain/beta chain-like LIT28_06090 IPR006654 Tryptophan synthase, beta chain LIT28_06090 IPR006653 Tryptophan synthase, beta chain, conserved site LIT28_06090 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_06095 IPR002028 Tryptophan synthase, alpha chain LIT28_06095 IPR018204 Tryptophan synthase, alpha chain, active site LIT28_06095 IPR011060 Ribulose-phosphate binding barrel LIT28_06095 IPR013785 Aldolase-type TIM barrel LIT28_06105 IPR003804 L-lactate permease LIT28_06110 IPR019268 Protein of unknown function DUF2278 LIT28_06145 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_06145 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT28_06145 IPR023536 Coenzyme A disulphide reductase, staphyolococci LIT28_06145 IPR017758 Coenzyme A disulphide reductase LIT28_06145 IPR023753 FAD/NAD(P)-binding domain LIT28_06145 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIT28_06175 IPR006255 Dihydrolipoamide succinyltransferase LIT28_06175 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LIT28_06175 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LIT28_06175 IPR000089 Biotin/lipoyl attachment LIT28_06175 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_06175 IPR036625 E3-binding domain superfamily LIT28_06175 IPR011053 Single hybrid motif LIT28_06175 IPR004167 Peripheral subunit-binding domain LIT28_06180 IPR029061 Thiamin diphosphate-binding fold LIT28_06180 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily LIT28_06180 IPR011603 2-oxoglutarate dehydrogenase E1 component LIT28_06180 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal LIT28_06180 IPR001017 Dehydrogenase, E1 component LIT28_06180 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial LIT28_06180 IPR005475 Transketolase-like, pyrimidine-binding domain LIT28_06185 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_06185 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_06260 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIT28_06260 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIT28_06260 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIT28_06260 IPR012338 Beta-lactamase/transpeptidase-like LIT28_06265 IPR001733 Peptidase S26B LIT28_06265 IPR036286 LexA/Signal peptidase-like superfamily LIT28_06270 IPR023833 Signal peptide, camelysin LIT28_06270 IPR022121 Peptidase M73, camelysin LIT28_06280 IPR022121 Peptidase M73, camelysin LIT28_06280 IPR023833 Signal peptide, camelysin LIT28_06285 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_06285 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily LIT28_06285 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain LIT28_06285 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_06295 IPR012300 Peptidase M6, InhA LIT28_06295 IPR008757 Peptidase M6-like, domain LIT28_06300 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_06300 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_06300 IPR016160 Aldehyde dehydrogenase, cysteine active site LIT28_06300 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIT28_06300 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_06300 IPR015590 Aldehyde dehydrogenase domain LIT28_06300 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent LIT28_06305 IPR003593 AAA+ ATPase domain LIT28_06305 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA LIT28_06305 IPR013611 Transport-associated OB, type 2 LIT28_06305 IPR003439 ABC transporter-like LIT28_06305 IPR017871 ABC transporter, conserved site LIT28_06305 IPR008995 Molybdate/tungstate binding, C-terminal LIT28_06305 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_06310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_06310 IPR035906 MetI-like superfamily LIT28_06315 IPR035906 MetI-like superfamily LIT28_06315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_06320 IPR006059 Bacterial extracellular solute-binding protein LIT28_06320 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein LIT28_06330 IPR004869 Membrane transport protein MMPL domain LIT28_06330 IPR000731 Sterol-sensing domain LIT28_06340 IPR002942 RNA-binding S4 domain LIT28_06340 IPR006145 Pseudouridine synthase, RsuA/RluA LIT28_06340 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LIT28_06340 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_06340 IPR036986 RNA-binding S4 domain superfamily LIT28_06340 IPR006225 Pseudouridine synthase, RluC/RluD LIT28_06350 IPR014044 CAP domain LIT28_06350 IPR014258 CAP domain, YkwD-like LIT28_06350 IPR035940 CAP superfamily LIT28_06355 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIT28_06355 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIT28_06355 IPR009051 Alpha-helical ferredoxin LIT28_06355 IPR012257 Glycolate oxidase, iron-sulphur subunit LIT28_06355 IPR004017 Cysteine-rich domain LIT28_06360 IPR016166 FAD-binding domain, PCMH-type LIT28_06360 IPR006094 FAD linked oxidase, N-terminal LIT28_06360 IPR004490 Glycolate oxidase subunit GlcD LIT28_06360 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 LIT28_06360 IPR016164 FAD-linked oxidase-like, C-terminal LIT28_06360 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_06360 IPR004113 FAD-linked oxidase, C-terminal LIT28_06365 IPR042070 PucR C-terminal helix-turn-helix domain superfamily LIT28_06365 IPR041522 CdaR, GGDEF-like domain LIT28_06365 IPR008599 Putative sugar diacid recognition LIT28_06365 IPR025736 PucR C-terminal helix-turn-helix domain LIT28_06375 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_06375 IPR039420 Transcriptional regulatory protein WalR-like LIT28_06375 IPR001789 Signal transduction response regulator, receiver domain LIT28_06375 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_06375 IPR011006 CheY-like superfamily LIT28_06380 IPR003660 HAMP domain LIT28_06380 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_06380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_06380 IPR005467 Histidine kinase domain LIT28_06380 IPR041328 ResE, histidine kinase sensor domain LIT28_06380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_06380 IPR000014 PAS domain LIT28_06380 IPR013767 PAS fold LIT28_06380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_06380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_06380 IPR035965 PAS domain superfamily LIT28_06385 IPR011711 GntR, C-terminal LIT28_06385 IPR008920 Transcription regulator FadR/GntR, C-terminal LIT28_06385 IPR000524 Transcription regulator HTH, GntR LIT28_06385 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_06385 IPR036390 Winged helix DNA-binding domain superfamily LIT28_06390 IPR022822 Lactate utilization protein A LIT28_06390 IPR004017 Cysteine-rich domain LIT28_06395 IPR003741 LUD domain LIT28_06395 IPR004452 4Fe-4S binding protein LIT28_06395 IPR037171 NagB/RpiA transferase-like LIT28_06395 IPR022825 Lactate utilization protein B LIT28_06395 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily LIT28_06395 IPR009051 Alpha-helical ferredoxin LIT28_06395 IPR024569 4Fe-4S binding protein, C-terminal LIT28_06395 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIT28_06395 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIT28_06400 IPR022823 Lactate utilization protein C LIT28_06400 IPR003741 LUD domain LIT28_06400 IPR037171 NagB/RpiA transferase-like LIT28_06400 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily LIT28_06405 IPR010627 Peptidase A24A, N-terminal LIT28_06405 IPR000045 Prepilin type IV endopeptidase, peptidase domain LIT28_06415 IPR023271 Aquaporin-like LIT28_06415 IPR000292 Formate/nitrite transporter LIT28_06415 IPR024002 Formate/nitrite transporter, conserved site LIT28_06420 IPR022493 Integral membrane YkoY LIT28_06420 IPR036259 MFS transporter superfamily LIT28_06420 IPR005496 Integral membrane protein TerC LIT28_06425 IPR004772 TrkH potassium transport family LIT28_06425 IPR003445 Cation transporter LIT28_06430 IPR038300 SASP, alpha/beta-type superfamily LIT28_06430 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_06430 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_06435 IPR002539 MaoC-like dehydratase domain LIT28_06435 IPR029069 HotDog domain superfamily LIT28_06455 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_06455 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIT28_06455 IPR036291 NAD(P)-binding domain superfamily LIT28_06460 IPR029058 Alpha/Beta hydrolase fold LIT28_06460 IPR000073 Alpha/beta hydrolase fold-1 LIT28_06460 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit LIT28_06465 IPR023080 D-amino acid dehydrogenase DadA LIT28_06465 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_06465 IPR006076 FAD dependent oxidoreductase LIT28_06470 IPR003445 Cation transporter LIT28_06485 IPR026045 Ferric binding protein LIT28_06490 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal LIT28_06490 IPR003439 ABC transporter-like LIT28_06490 IPR017871 ABC transporter, conserved site LIT28_06490 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 LIT28_06490 IPR008995 Molybdate/tungstate binding, C-terminal LIT28_06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_06490 IPR003593 AAA+ ATPase domain LIT28_06490 IPR013611 Transport-associated OB, type 2 LIT28_06495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_06495 IPR035906 MetI-like superfamily LIT28_06500 IPR036412 HAD-like superfamily LIT28_06500 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_06500 IPR006439 HAD hydrolase, subfamily IA LIT28_06500 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_06500 IPR023214 HAD superfamily LIT28_06500 IPR006323 Phosphonoacetaldehyde hydrolase LIT28_06505 IPR012703 2-aminoethylphosphonate--pyruvate transaminase LIT28_06505 IPR000192 Aminotransferase class V domain LIT28_06505 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_06505 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_06505 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase LIT28_06505 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_06515 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_06515 IPR014036 DeoR C-terminal sensor domain LIT28_06515 IPR001034 DeoR-type HTH domain LIT28_06515 IPR037171 NagB/RpiA transferase-like LIT28_06515 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LIT28_06515 IPR036390 Winged helix DNA-binding domain superfamily LIT28_06520 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LIT28_06520 IPR001119 S-layer homology domain LIT28_06525 IPR017714 Methylthioribulose-1-phosphate dehydratase LIT28_06525 IPR036409 Class II aldolase/adducin N-terminal domain superfamily LIT28_06525 IPR001303 Class II aldolase/adducin N-terminal LIT28_06535 IPR006837 Divergent polysaccharide deacetylase LIT28_06535 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_06540 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily LIT28_06540 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like LIT28_06545 IPR033479 Double Cache domain 1 LIT28_06545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_06545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_06545 IPR005467 Histidine kinase domain LIT28_06545 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_06545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_06545 IPR029151 Periplasmic sensor-like domain superfamily LIT28_06545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_06550 IPR000835 MarR-type HTH domain LIT28_06550 IPR023187 Transcriptional regulator MarR-type, conserved site LIT28_06550 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_06550 IPR036390 Winged helix DNA-binding domain superfamily LIT28_06560 IPR024775 DinB-like domain LIT28_06560 IPR034660 DinB/YfiT-like putative metalloenzymes LIT28_06570 IPR013767 PAS fold LIT28_06570 IPR000014 PAS domain LIT28_06570 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_06570 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_06570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_06570 IPR005467 Histidine kinase domain LIT28_06570 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_06570 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_06570 IPR035965 PAS domain superfamily LIT28_06575 IPR018317 Queuosine biosynthesis protein QueC LIT28_06575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_06580 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily LIT28_06580 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family LIT28_06585 IPR013785 Aldolase-type TIM barrel LIT28_06585 IPR024924 7-carboxy-7-deazaguanine synthase-like LIT28_06585 IPR007197 Radical SAM LIT28_06585 IPR017742 7-carboxy-7-deazaguanine synthase LIT28_06590 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF LIT28_06590 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 LIT28_06595 IPR018690 Protein of unknown function DUF2187 LIT28_06625 IPR004465 Ribonucleotide reductase Class Ib, NrdI LIT28_06625 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial LIT28_06625 IPR029039 Flavoprotein-like superfamily LIT28_06640 IPR012348 Ribonucleotide reductase-like LIT28_06640 IPR026494 Ribonucleoside reductase subunit beta, NrdF LIT28_06640 IPR033909 Ribonucleotide reductase small subunit LIT28_06640 IPR030475 Ribonucleotide reductase small subunit, acitve site LIT28_06640 IPR009078 Ferritin-like superfamily LIT28_06640 IPR000358 Ribonucleotide reductase small subunit family LIT28_06645 IPR000524 Transcription regulator HTH, GntR LIT28_06645 IPR036390 Winged helix DNA-binding domain superfamily LIT28_06645 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_06650 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_06650 IPR003439 ABC transporter-like LIT28_06650 IPR003593 AAA+ ATPase domain LIT28_06660 IPR003593 AAA+ ATPase domain LIT28_06660 IPR003439 ABC transporter-like LIT28_06660 IPR017871 ABC transporter, conserved site LIT28_06660 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_06680 IPR000485 AsnC-type HTH domain LIT28_06680 IPR011008 Dimeric alpha-beta barrel LIT28_06680 IPR019888 Transcription regulator AsnC-type LIT28_06680 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LIT28_06680 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_06680 IPR036390 Winged helix DNA-binding domain superfamily LIT28_06690 IPR036380 Isochorismatase-like superfamily LIT28_06690 IPR000868 Isochorismatase-like LIT28_06700 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily LIT28_06700 IPR029062 Class I glutamine amidotransferase-like LIT28_06700 IPR003507 Peptidase family S66 LIT28_06700 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal LIT28_06700 IPR040449 LD-carboxypeptidase, N-terminal LIT28_06700 IPR040921 LD-carboxypeptidase, C-terminal LIT28_06705 IPR004136 Nitronate monooxygenase LIT28_06705 IPR013785 Aldolase-type TIM barrel LIT28_06710 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes LIT28_06710 IPR006998 DltD LIT28_06715 IPR036736 ACP-like superfamily LIT28_06715 IPR003230 D-alanyl carrier protein LIT28_06715 IPR009081 Phosphopantetheine binding ACP domain LIT28_06720 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB LIT28_06720 IPR024024 D-alanyl transfer protein DltB LIT28_06720 IPR004299 Membrane bound O-acyl transferase, MBOAT LIT28_06725 IPR042099 AMP-dependent synthetase-like superfamily LIT28_06725 IPR010071 Amino acid adenylation domain LIT28_06725 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_06725 IPR020845 AMP-binding, conserved site LIT28_06725 IPR010072 D-alanine--D-alanyl carrier protein ligase LIT28_06725 IPR000873 AMP-dependent synthetase/ligase LIT28_06735 IPR011650 Peptidase M20, dimerisation domain LIT28_06735 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_06735 IPR002933 Peptidase M20 LIT28_06735 IPR017439 Amidohydrolase LIT28_06745 IPR010087 Flavodoxin, short chain LIT28_06745 IPR001094 Flavodoxin-like LIT28_06745 IPR008254 Flavodoxin/nitric oxide synthase LIT28_06745 IPR001226 Flavodoxin, conserved site LIT28_06745 IPR029039 Flavoprotein-like superfamily LIT28_06780 IPR002528 Multi antimicrobial extrusion protein LIT28_06785 IPR003824 Undecaprenyl-diphosphatase UppP LIT28_06800 IPR000835 MarR-type HTH domain LIT28_06800 IPR036390 Winged helix DNA-binding domain superfamily LIT28_06800 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_06810 IPR001991 Sodium:dicarboxylate symporter LIT28_06810 IPR033380 Glutamate-aspartate symport protein GltP/GltT LIT28_06810 IPR018107 Sodium:dicarboxylate symporter, conserved site LIT28_06810 IPR036458 Sodium:dicarboxylate symporter superfamily LIT28_06815 IPR004772 TrkH potassium transport family LIT28_06815 IPR003445 Cation transporter LIT28_06825 IPR014229 Sporulation protein YtfJ LIT28_06835 IPR005370 Uncharacterised protein family UPF0180 LIT28_06845 IPR001544 Aminotransferase class IV LIT28_06845 IPR018300 Aminotransferase, class IV, conserved site LIT28_06845 IPR036038 Aminotransferase-like, PLP-dependent enzymes LIT28_06845 IPR005785 Branched-chain amino acid aminotransferase I LIT28_06845 IPR033939 Branched-chain aminotransferase LIT28_06850 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LIT28_06850 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LIT28_06850 IPR029061 Thiamin diphosphate-binding fold LIT28_06850 IPR012000 Thiamine pyrophosphate enzyme, central domain LIT28_06850 IPR039368 Acetolactate synthase large subunit, TPP binding domain LIT28_06850 IPR012846 Acetolactate synthase, large subunit, biosynthetic LIT28_06850 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIT28_06855 IPR004789 Acetolactate synthase, small subunit LIT28_06855 IPR039557 AHAS, ACT domain LIT28_06855 IPR002912 ACT domain LIT28_06855 IPR019455 Acetolactate synthase, small subunit, C-terminal LIT28_06855 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal LIT28_06860 IPR036291 NAD(P)-binding domain superfamily LIT28_06860 IPR013023 Ketol-acid reductoisomerase LIT28_06860 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_06860 IPR013116 Ketol-acid reductoisomerase, N-terminal LIT28_06860 IPR000506 Ketol-acid reductoisomerase, C-terminal LIT28_06860 IPR014359 Ketol-acid reductoisomerase, prokaryotic LIT28_06865 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain LIT28_06865 IPR013785 Aldolase-type TIM barrel LIT28_06865 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily LIT28_06865 IPR005671 2-isopropylmalate synthase, bacterial-type LIT28_06865 IPR000891 Pyruvate carboxyltransferase LIT28_06865 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site LIT28_06870 IPR004429 Isopropylmalate dehydrogenase LIT28_06870 IPR024084 Isopropylmalate dehydrogenase-like domain LIT28_06870 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LIT28_06875 IPR018136 Aconitase family, 4Fe-4S cluster binding site LIT28_06875 IPR004430 3-isopropylmalate dehydratase, large subunit LIT28_06875 IPR036008 Aconitase, iron-sulfur domain LIT28_06875 IPR033941 3-Isopropylmalate dehydratase, catalytic domain LIT28_06875 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 LIT28_06875 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain LIT28_06880 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LIT28_06880 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain LIT28_06880 IPR033940 3-isopropylmalate dehydratase, swivel domain LIT28_06880 IPR004431 3-isopropylmalate dehydratase, small subunit LIT28_06885 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_06885 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain LIT28_06885 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit LIT28_06885 IPR004517 ATP phosphoribosyltransferase regulatory subunit LIT28_06890 IPR024893 ATP phosphoribosyltransferase HisG, short form LIT28_06890 IPR013820 ATP phosphoribosyltransferase, catalytic domain LIT28_06890 IPR001348 ATP phosphoribosyltransferase HisG LIT28_06895 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_06895 IPR001692 Histidinol dehydrogenase, conserved site LIT28_06895 IPR022695 Histidinol dehydrogenase, monofunctional LIT28_06895 IPR012131 Histidinol dehydrogenase LIT28_06900 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site LIT28_06900 IPR000807 Imidazoleglycerol-phosphate dehydratase LIT28_06900 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily LIT28_06900 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_06905 IPR017926 Glutamine amidotransferase LIT28_06905 IPR010139 Imidazole glycerol phosphate synthase, subunit H LIT28_06905 IPR029062 Class I glutamine amidotransferase-like LIT28_06910 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA LIT28_06910 IPR006062 Histidine biosynthesis LIT28_06910 IPR013785 Aldolase-type TIM barrel LIT28_06910 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase LIT28_06910 IPR011060 Ribulose-phosphate binding barrel LIT28_06915 IPR011060 Ribulose-phosphate binding barrel LIT28_06915 IPR004651 Histidine biosynthesis, HisF LIT28_06915 IPR013785 Aldolase-type TIM barrel LIT28_06915 IPR006062 Histidine biosynthesis LIT28_06920 IPR026660 Phosphoribosyl-AMP cyclohydrolase LIT28_06920 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily LIT28_06920 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain LIT28_06925 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like LIT28_06925 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase LIT28_06930 IPR016195 Polymerase/histidinol phosphatase-like LIT28_06930 IPR004013 PHP domain LIT28_06930 IPR010140 Histidinol phosphate phosphatase, HisJ LIT28_06940 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LIT28_06940 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT28_06940 IPR036291 NAD(P)-binding domain superfamily LIT28_06945 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase LIT28_06945 IPR000462 CDP-alcohol phosphatidyltransferase LIT28_06950 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIT28_06950 IPR012160 Lipoteichoic acid synthase-like LIT28_06950 IPR000917 Sulfatase, N-terminal LIT28_06960 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site LIT28_06960 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LIT28_06960 IPR002986 Diaminopimelate decarboxylase, LysA LIT28_06960 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal LIT28_06960 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal LIT28_06960 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site LIT28_06960 IPR000183 Ornithine/DAP/Arg decarboxylase LIT28_06960 IPR029066 PLP-binding barrel LIT28_06970 IPR002500 Phosphoadenosine phosphosulphate reductase LIT28_06970 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase LIT28_06970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_06970 IPR011798 Adenosine 5'-phosphosulphate reductase LIT28_06975 IPR024951 Sulphate adenylyltransferase catalytic domain LIT28_06975 IPR002650 Sulphate adenylyltransferase LIT28_06975 IPR020792 Sulphate adenylyltransferase, prokaryotic-type LIT28_06975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_06975 IPR015947 PUA-like superfamily LIT28_06975 IPR025980 ATP-sulfurylase PUA-like domain LIT28_06980 IPR002891 Adenylyl-sulfate kinase LIT28_06980 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_06985 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like LIT28_06985 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain LIT28_06985 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily LIT28_06985 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain LIT28_06985 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site LIT28_06995 IPR006366 Uroporphyrin-III C-methyltransferase LIT28_06995 IPR014777 Tetrapyrrole methylase, subdomain 1 LIT28_06995 IPR000878 Tetrapyrrole methylase LIT28_06995 IPR035996 Tetrapyrrole methylase superfamily LIT28_06995 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site LIT28_06995 IPR014776 Tetrapyrrole methylase, subdomain 2 LIT28_07000 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX LIT28_07005 IPR036291 NAD(P)-binding domain superfamily LIT28_07005 IPR028161 Siroheme biosynthesis protein Met8 LIT28_07005 IPR006367 Sirohaem synthase, N-terminal LIT28_07010 IPR000175 Sodium:neurotransmitter symporter LIT28_07010 IPR037272 Sodium:neurotransmitter symporter superfamily LIT28_07020 IPR018107 Sodium:dicarboxylate symporter, conserved site LIT28_07020 IPR001991 Sodium:dicarboxylate symporter LIT28_07020 IPR033380 Glutamate-aspartate symport protein GltP/GltT LIT28_07020 IPR036458 Sodium:dicarboxylate symporter superfamily LIT28_07030 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LIT28_07030 IPR004770 Na+/H+ antiporter NhaC LIT28_07045 IPR016975 Cell wall-active antibiotic response protein LIT28_07045 IPR024425 Cell wall-active antibiotics response 4TMS YvqF LIT28_07050 IPR003660 HAMP domain LIT28_07050 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_07050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_07050 IPR005467 Histidine kinase domain LIT28_07050 IPR017202 Sensor histidine kinase LiaS/VraS LIT28_07050 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LIT28_07055 IPR011006 CheY-like superfamily LIT28_07055 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_07055 IPR000792 Transcription regulator LuxR, C-terminal LIT28_07055 IPR001789 Signal transduction response regulator, receiver domain LIT28_07065 IPR004685 Branched-chain amino acid transport system II carrier protein LIT28_07075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_07075 IPR013216 Methyltransferase type 11 LIT28_07100 IPR017938 Riboflavin synthase-like beta-barrel LIT28_07100 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIT28_07100 IPR023950 Flavohemoprotein LIT28_07100 IPR012292 Globin/Protoglobin LIT28_07100 IPR009050 Globin-like superfamily LIT28_07100 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIT28_07100 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIT28_07100 IPR017927 FAD-binding domain, ferredoxin reductase-type LIT28_07100 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LIT28_07100 IPR000971 Globin LIT28_07115 IPR002781 Transmembrane protein TauE-like LIT28_07120 IPR001204 Phosphate transporter LIT28_07125 IPR018445 Putative phosphate transport regulator LIT28_07125 IPR038078 PhoU-like domain superfamily LIT28_07130 IPR001460 Penicillin-binding protein, transpeptidase LIT28_07130 IPR001264 Glycosyl transferase, family 51 LIT28_07130 IPR012338 Beta-lactamase/transpeptidase-like LIT28_07130 IPR036950 Penicillin binding protein transglycosylase domain LIT28_07130 IPR023346 Lysozyme-like domain superfamily LIT28_07145 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_07145 IPR035965 PAS domain superfamily LIT28_07145 IPR000700 PAS-associated, C-terminal LIT28_07145 IPR000014 PAS domain LIT28_07145 IPR013767 PAS fold LIT28_07145 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_07145 IPR005467 Histidine kinase domain LIT28_07145 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_07145 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_07145 IPR003660 HAMP domain LIT28_07145 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_07150 IPR002763 Protein of unknown function DUF72 LIT28_07150 IPR036520 UPF0759 superfamily LIT28_07160 IPR002104 Integrase, catalytic domain LIT28_07160 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_07160 IPR013762 Integrase-like, catalytic domain superfamily LIT28_07165 IPR035965 PAS domain superfamily LIT28_07165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_07165 IPR013767 PAS fold LIT28_07165 IPR005467 Histidine kinase domain LIT28_07165 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_07165 IPR031967 PhoR, single Cache-like domain LIT28_07165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_07165 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_07165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_07165 IPR000014 PAS domain LIT28_07170 IPR004402 Purine nucleoside phosphorylase DeoD-type LIT28_07170 IPR018016 Nucleoside phosphorylase, conserved site LIT28_07170 IPR000845 Nucleoside phosphorylase domain LIT28_07170 IPR035994 Nucleoside phosphorylase superfamily LIT28_07180 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal LIT28_07180 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LIT28_07180 IPR016181 Acyl-CoA N-acyltransferase LIT28_07195 IPR019833 Manganese/iron superoxide dismutase, binding site LIT28_07195 IPR019831 Manganese/iron superoxide dismutase, N-terminal LIT28_07195 IPR001189 Manganese/iron superoxide dismutase LIT28_07195 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily LIT28_07195 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily LIT28_07195 IPR019832 Manganese/iron superoxide dismutase, C-terminal LIT28_07200 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIT28_07200 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIT28_07200 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIT28_07200 IPR012338 Beta-lactamase/transpeptidase-like LIT28_07205 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LIT28_07210 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LIT28_07215 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LIT28_07215 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LIT28_07215 IPR036986 RNA-binding S4 domain superfamily LIT28_07215 IPR006145 Pseudouridine synthase, RsuA/RluA LIT28_07215 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_07215 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LIT28_07215 IPR002942 RNA-binding S4 domain LIT28_07220 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIT28_07220 IPR023555 Thiol-disulphide oxidoreductase ResA LIT28_07220 IPR013766 Thioredoxin domain LIT28_07220 IPR036249 Thioredoxin-like superfamily LIT28_07225 IPR007816 ResB-like domain LIT28_07230 IPR017562 Cytochrome c-type biogenesis protein CcsA LIT28_07230 IPR002541 Cytochrome c assembly protein LIT28_07235 IPR011006 CheY-like superfamily LIT28_07235 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_07235 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_07235 IPR039420 Transcriptional regulatory protein WalR-like LIT28_07235 IPR001789 Signal transduction response regulator, receiver domain LIT28_07240 IPR035965 PAS domain superfamily LIT28_07240 IPR000014 PAS domain LIT28_07240 IPR041328 ResE, histidine kinase sensor domain LIT28_07240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_07240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_07240 IPR005467 Histidine kinase domain LIT28_07240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_07240 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_07240 IPR003660 HAMP domain LIT28_07240 IPR013767 PAS fold LIT28_07240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_07245 IPR036451 Cobalamin adenosyltransferase-like superfamily LIT28_07245 IPR016030 Cobalamin adenosyltransferase-like LIT28_07245 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type LIT28_07250 IPR016047 Peptidase M23 LIT28_07250 IPR011055 Duplicated hybrid motif LIT28_07260 IPR025720 ECF transporter, Riboflavin transporter RibU LIT28_07260 IPR024529 ECF transporter, substrate-specific component LIT28_07265 IPR001080 3Fe-4S ferredoxin LIT28_07265 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIT28_07275 IPR011545 DEAD/DEAH box helicase domain LIT28_07275 IPR004589 DNA helicase, ATP-dependent, RecQ type LIT28_07275 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_07275 IPR001650 Helicase, C-terminal LIT28_07275 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_07275 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site LIT28_07280 IPR003675 CAAX prenyl protease 2 LIT28_07290 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_07290 IPR029052 Metallo-dependent phosphatase-like LIT28_07295 IPR000551 MerR-type HTH domain LIT28_07295 IPR036594 Methionine synthase domain LIT28_07295 IPR009061 Putative DNA-binding domain superfamily LIT28_07295 IPR036724 Cobalamin-binding domain superfamily LIT28_07295 IPR006158 Cobalamin (vitamin B12)-binding domain LIT28_07295 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LIT28_07300 IPR008681 Negative regulator of genetic competence, MecA LIT28_07300 IPR038471 MecA, C-terminal domain superfamily LIT28_07305 IPR014362 Glutamate dehydrogenase LIT28_07305 IPR036291 NAD(P)-binding domain superfamily LIT28_07305 IPR033922 NAD(P) binding domain of glutamate dehydrogenase LIT28_07305 IPR033524 Leu/Phe/Val dehydrogenases active site LIT28_07305 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase LIT28_07305 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain LIT28_07305 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal LIT28_07325 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA LIT28_07325 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_07330 IPR027475 Asparaginase/glutaminase, active site 2 LIT28_07330 IPR027474 L-asparaginase, N-terminal LIT28_07330 IPR004550 L-asparaginase, type II LIT28_07330 IPR036152 Asparaginase/glutaminase-like superfamily LIT28_07330 IPR006034 Asparaginase/glutaminase-like LIT28_07330 IPR020827 Asparaginase/glutaminase, active site 1 LIT28_07330 IPR040919 Asparaginase/glutaminase, C-terminal LIT28_07330 IPR027473 L-asparaginase, C-terminal LIT28_07330 IPR037152 L-asparaginase, N-terminal domain superfamily LIT28_07340 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_07340 IPR003136 Cytidylate kinase LIT28_07340 IPR011994 Cytidylate kinase domain LIT28_07345 IPR012340 Nucleic acid-binding, OB-fold LIT28_07345 IPR022967 RNA-binding domain, S1 LIT28_07345 IPR003029 S1 domain LIT28_07350 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent LIT28_07350 IPR000262 FMN-dependent dehydrogenase LIT28_07350 IPR013785 Aldolase-type TIM barrel LIT28_07355 IPR025414 YpzI-like protein LIT28_07365 IPR025918 YIEGIA protein LIT28_07375 IPR015946 K homology domain-like, alpha/beta LIT28_07375 IPR005225 Small GTP-binding protein domain LIT28_07375 IPR032859 GTPase Der, C-terminal KH-domain-like LIT28_07375 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_07375 IPR031166 EngA-type guanine nucleotide-binding (G) domain LIT28_07375 IPR016484 GTP-binding protein EngA LIT28_07375 IPR006073 GTP binding domain LIT28_07380 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_07380 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_07380 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent LIT28_07380 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal LIT28_07380 IPR036291 NAD(P)-binding domain superfamily LIT28_07380 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal LIT28_07390 IPR020076 Protein of unknown function DUF2768 LIT28_07400 IPR014201 Sporulation stage IV, protein A LIT28_07400 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_07405 IPR000119 Histone-like DNA-binding protein LIT28_07405 IPR020816 Histone-like DNA-binding protein, conserved site LIT28_07405 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LIT28_07410 IPR001474 GTP cyclohydrolase I LIT28_07410 IPR018234 GTP cyclohydrolase I, conserved site LIT28_07410 IPR020602 GTP cyclohydrolase I domain LIT28_07415 IPR009920 Heptaprenyl diphosphate synthase subunit 1 LIT28_07420 IPR014122 Demethylmenaquinone methyltransferase LIT28_07420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_07420 IPR004033 UbiE/COQ5 methyltransferase LIT28_07420 IPR023576 UbiE/COQ5 methyltransferase, conserved site LIT28_07425 IPR014119 Heptaprenyl diphosphate synthase component II LIT28_07425 IPR008949 Isoprenoid synthase domain superfamily LIT28_07425 IPR000092 Polyprenyl synthetase LIT28_07425 IPR033749 Polyprenyl synthetase, conserved site LIT28_07430 IPR034907 Nucleoside diphosphate kinase-like domain LIT28_07430 IPR036850 Nucleoside diphosphate kinase-like domain superfamily LIT28_07430 IPR001564 Nucleoside diphosphate kinase LIT28_07430 IPR023005 Nucleoside diphosphate kinase, active site LIT28_07435 IPR000453 Chorismate synthase LIT28_07435 IPR035904 Chorismate synthase AroC superfamily LIT28_07435 IPR020541 Chorismate synthase, conserved site LIT28_07440 IPR016037 3-dehydroquinate synthase AroB LIT28_07440 IPR030963 3-dehydroquinate synthase family LIT28_07440 IPR030960 3-dehydroquinate synthase domain LIT28_07445 IPR004839 Aminotransferase, class I/classII LIT28_07445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_07445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_07445 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_07445 IPR005861 Histidinol-phosphate aminotransferase family LIT28_07445 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LIT28_07450 IPR019734 Tetratricopeptide repeat LIT28_07450 IPR013026 Tetratricopeptide repeat-containing domain LIT28_07450 IPR011990 Tetratricopeptide-like helical domain superfamily LIT28_07455 IPR027393 Virus scaffolding protein, C-terminal LIT28_07455 IPR038091 UPF0302, N-terminal domain superfamily LIT28_07455 IPR014963 Uncharacterised domain UPF0302, N-terminal LIT28_07455 IPR014957 IDEAL domain LIT28_07455 IPR011188 Uncharacterised protein family UPF0302 LIT28_07460 IPR019615 Protein of unknown function DUF2487 LIT28_07465 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LIT28_07465 IPR014349 Rieske iron-sulphur protein LIT28_07465 IPR006311 Twin-arginine translocation pathway, signal sequence LIT28_07465 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LIT28_07470 IPR005797 Cytochrome b/b6, N-terminal LIT28_07470 IPR027387 Cytochrome b/b6-like domain superfamily LIT28_07470 IPR016174 Di-haem cytochrome, transmembrane LIT28_07475 IPR009056 Cytochrome c-like domain LIT28_07475 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit LIT28_07475 IPR027387 Cytochrome b/b6-like domain superfamily LIT28_07475 IPR036909 Cytochrome c-like domain superfamily LIT28_07475 IPR036150 Cytochrome b/b6, C-terminal domain superfamily LIT28_07475 IPR005798 Cytochrome b/b6, C-terminal LIT28_07480 IPR009845 Protein of unknown function DUF1405 LIT28_07490 IPR014231 Sporulation protein YpjB LIT28_07495 IPR007395 Putative neutral zinc metallopeptidase LIT28_07505 IPR003740 Uncharacterised membrane protein YitT LIT28_07505 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_07505 IPR019264 Domain of unknown function DUF2179 LIT28_07510 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD LIT28_07510 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LIT28_07515 IPR036291 NAD(P)-binding domain superfamily LIT28_07515 IPR022664 Dihydrodipicolinate reductase, conserved site LIT28_07515 IPR022663 Dihydrodipicolinate reductase, C-terminal LIT28_07515 IPR000846 Dihydrodipicolinate reductase, N-terminal LIT28_07515 IPR023940 Dihydrodipicolinate reductase LIT28_07520 IPR004363 Methylglyoxal synthase LIT28_07520 IPR018148 Methylglyoxal synthase, active site LIT28_07520 IPR011607 Methylglyoxal synthase-like domain LIT28_07520 IPR036914 Methylglyoxal synthase-like domain superfamily LIT28_07525 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 LIT28_07525 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related LIT28_07525 IPR024078 Putative deacetylase LmbE-like domain superfamily LIT28_07530 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LIT28_07530 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA LIT28_07530 IPR001296 Glycosyl transferase, family 1 LIT28_07535 IPR032810 CCA-adding enzyme, C-terminal LIT28_07535 IPR023068 CCA-adding enzyme, firmicutes LIT28_07535 IPR002646 Poly A polymerase, head domain LIT28_07535 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LIT28_07540 IPR008988 Transcriptional repressor, C-terminal LIT28_07540 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_07540 IPR013196 Helix-turn-helix, type 11 LIT28_07540 IPR036390 Winged helix DNA-binding domain superfamily LIT28_07540 IPR003142 Biotin protein ligase, C-terminal LIT28_07540 IPR030855 Bifunctional ligase/repressor BirA LIT28_07540 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LIT28_07540 IPR004408 Biotin--acetyl-CoA-carboxylase ligase LIT28_07540 IPR004409 Biotin operon repressor, helix-turn-helix domain LIT28_07550 IPR003700 Ketopantoate hydroxymethyltransferase LIT28_07550 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIT28_07550 IPR040442 Pyruvate kinase-like domain superfamily LIT28_07555 IPR004821 Cytidyltransferase-like domain LIT28_07555 IPR003721 Pantoate-beta-alanine ligase LIT28_07555 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain LIT28_07555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_07560 IPR009010 Aspartate decarboxylase-like domain superfamily LIT28_07560 IPR003190 Aspartate decarboxylase LIT28_07565 IPR012337 Ribonuclease H-like superfamily LIT28_07565 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_07565 IPR001650 Helicase, C-terminal LIT28_07565 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_07565 IPR006310 3'-5' exonuclease DinG LIT28_07565 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type LIT28_07565 IPR013520 Exonuclease, RNase T/DNA polymerase III LIT28_07565 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain LIT28_07565 IPR036397 Ribonuclease H superfamily LIT28_07565 IPR006935 Helicase/UvrB, N-terminal LIT28_07565 IPR006555 ATP-dependent helicase, C-terminal LIT28_07570 IPR012190 Uncharacterised conserved protein UCP036698, YpmA LIT28_07580 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LIT28_07580 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_07580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_07580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_07580 IPR004839 Aminotransferase, class I/classII LIT28_07585 IPR034829 DnaD-like domain superfamily LIT28_07585 IPR006343 DnaD domain LIT28_07585 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_07590 IPR005759 Endonuclease III LIT28_07590 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LIT28_07590 IPR000445 Helix-hairpin-helix motif LIT28_07590 IPR003265 HhH-GPD domain LIT28_07590 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif LIT28_07590 IPR004036 Endonuclease III-like, conserved site-2 LIT28_07590 IPR011257 DNA glycosylase LIT28_07590 IPR004035 Endonuclease III, iron-sulphur binding site LIT28_07600 IPR012338 Beta-lactamase/transpeptidase-like LIT28_07600 IPR003961 Fibronectin type III LIT28_07600 IPR036116 Fibronectin type III superfamily LIT28_07600 IPR001264 Glycosyl transferase, family 51 LIT28_07600 IPR013783 Immunoglobulin-like fold LIT28_07600 IPR023346 Lysozyme-like domain superfamily LIT28_07600 IPR001460 Penicillin-binding protein, transpeptidase LIT28_07600 IPR036950 Penicillin binding protein transglycosylase domain LIT28_07605 IPR011335 Restriction endonuclease type II-like LIT28_07605 IPR004612 Holliday junction resolvase RecU LIT28_07605 IPR011856 tRNA endonuclease-like domain superfamily LIT28_07610 IPR019658 Protein of unknown function DUF2515 LIT28_07645 IPR010697 YspA SLOG family LIT28_07650 IPR011229 Cell cycle protein GpsB LIT28_07650 IPR019933 DivIVA domain LIT28_07650 IPR007793 DivIVA family LIT28_07660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LIT28_07660 IPR000241 Putative RNA methylase domain LIT28_07660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_07660 IPR004114 THUMP domain LIT28_07670 IPR006555 ATP-dependent helicase, C-terminal LIT28_07670 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type LIT28_07670 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_07675 IPR001333 Peptidase M32, carboxypeptidase Taq LIT28_07685 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 LIT28_07685 IPR001714 Peptidase M24, methionine aminopeptidase LIT28_07685 IPR036005 Creatinase/aminopeptidase-like LIT28_07685 IPR000994 Peptidase M24 LIT28_07690 IPR000836 Phosphoribosyltransferase domain LIT28_07690 IPR029057 Phosphoribosyltransferase-like LIT28_07690 IPR010079 Xanthine phosphoribosyltransferase LIT28_07695 IPR017588 Uric acid permease UacT-like LIT28_07695 IPR006042 Xanthine/uracil permease LIT28_07695 IPR006043 Xanthine/uracil/vitamin C permease LIT28_07705 IPR007349 Domain of unknown function DUF418 LIT28_07710 IPR022812 Dynamin superfamily LIT28_07710 IPR027094 Mitofusin family LIT28_07710 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_07720 IPR016181 Acyl-CoA N-acyltransferase LIT28_07720 IPR000182 GNAT domain LIT28_07725 IPR019688 Protein of unknown function DUF2533 LIT28_07730 IPR036873 Rhodanese-like domain superfamily LIT28_07730 IPR001763 Rhodanese-like domain LIT28_07755 IPR016185 Pre-ATP-grasp domain superfamily LIT28_07755 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain LIT28_07765 IPR023299 P-type ATPase, cytoplasmic domain N LIT28_07765 IPR004014 Cation-transporting P-type ATPase, N-terminal LIT28_07765 IPR001757 P-type ATPase LIT28_07765 IPR006068 Cation-transporting P-type ATPase, C-terminal LIT28_07765 IPR023214 HAD superfamily LIT28_07765 IPR006415 P-type ATPase, subfamily IIIB LIT28_07765 IPR008250 P-type ATPase, A domain superfamily LIT28_07765 IPR023298 P-type ATPase, transmembrane domain superfamily LIT28_07765 IPR018303 P-type ATPase, phosphorylation site LIT28_07765 IPR036412 HAD-like superfamily LIT28_07770 IPR002421 5'-3' exonuclease, N-terminal LIT28_07770 IPR036279 5'-3' exonuclease, C-terminal domain superfamily LIT28_07770 IPR020045 DNA polymerase I-like, H3TH domain LIT28_07770 IPR038969 Flap endonuclease LIT28_07770 IPR008918 Helix-hairpin-helix motif, class 2 LIT28_07770 IPR029060 PIN-like domain superfamily LIT28_07770 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal LIT28_07795 IPR003362 Bacterial sugar transferase LIT28_07795 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LIT28_07810 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_07810 IPR001173 Glycosyltransferase 2-like LIT28_07815 IPR001296 Glycosyl transferase, family 1 LIT28_07815 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LIT28_07815 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA LIT28_07830 IPR016181 Acyl-CoA N-acyltransferase LIT28_07830 IPR000182 GNAT domain LIT28_07830 IPR041496 YitH, acetyltransferase (GNAT) domain LIT28_07850 IPR002156 Ribonuclease H domain LIT28_07850 IPR012337 Ribonuclease H-like superfamily LIT28_07850 IPR036397 Ribonuclease H superfamily LIT28_07855 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase LIT28_07855 IPR011013 Galactose mutarotase-like domain superfamily LIT28_07855 IPR014718 Glycoside hydrolase-type carbohydrate-binding LIT28_07855 IPR037481 Protein LacX LIT28_07880 IPR002059 Cold-shock protein, DNA-binding LIT28_07880 IPR012340 Nucleic acid-binding, OB-fold LIT28_07880 IPR011129 Cold shock domain LIT28_07880 IPR019844 Cold-shock (CSD) domain LIT28_07880 IPR012156 Cold shock, CspA LIT28_07885 IPR014988 Uncharacterised protein family, YqcI/YcgG LIT28_07890 IPR001123 Amino acid exporter protein, LeuE-type LIT28_07905 IPR007436 Protein of unknown function DUF485 LIT28_07910 IPR038377 Sodium/glucose symporter superfamily LIT28_07910 IPR001734 Sodium/solute symporter LIT28_07910 IPR018212 Sodium/solute symporter, conserved site LIT28_07915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_07915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_07915 IPR005814 Aminotransferase class-III LIT28_07915 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_07925 IPR006153 Cation/H+ exchanger LIT28_07925 IPR004771 K+/H+ exchanger LIT28_07925 IPR038770 Sodium/solute symporter superfamily LIT28_07930 IPR001587 Ribonuclease J, conserved site LIT28_07930 IPR041636 Ribonuclease J, C-terminal LIT28_07930 IPR030854 Ribonuclease J, bacteria LIT28_07930 IPR004613 Ribonuclease J LIT28_07930 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain LIT28_07930 IPR001279 Metallo-beta-lactamase LIT28_07930 IPR042173 Ribonuclease J, domain 2 LIT28_07930 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_07935 IPR009061 Putative DNA-binding domain superfamily LIT28_07935 IPR029442 GyrI-like small molecule binding domain LIT28_07935 IPR000551 MerR-type HTH domain LIT28_07935 IPR011256 Regulatory factor, effector binding domain superfamily LIT28_07935 IPR010499 Bacterial transcription activator, effector binding LIT28_07945 IPR007353 Protein of unknown function DUF421 LIT28_07945 IPR023090 UPF0702, alpha/beta domain superfamily LIT28_07950 IPR003848 Domain of unknown function DUF218 LIT28_07950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_07960 IPR016446 Flavin oxidoreductase Frp family LIT28_07960 IPR029479 Nitroreductase LIT28_07960 IPR000415 Nitroreductase-like LIT28_08000 IPR005001 RNA-binding protein Hfq LIT28_08000 IPR010920 LSM domain superfamily LIT28_08010 IPR000540 Flagellar motor protein MotA, conserved site LIT28_08010 IPR002898 MotA/TolQ/ExbB proton channel LIT28_08015 IPR006665 OmpA-like domain LIT28_08015 IPR036737 OmpA-like domain superfamily LIT28_08015 IPR025713 Motility protein B, N-terminal domain LIT28_08020 IPR011006 CheY-like superfamily LIT28_08020 IPR001789 Signal transduction response regulator, receiver domain LIT28_08025 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_08025 IPR036641 HPT domain superfamily LIT28_08025 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_08025 IPR005467 Histidine kinase domain LIT28_08025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_08025 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LIT28_08025 IPR035891 CheY-binding domain of CheA LIT28_08025 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_08025 IPR004105 Histidine kinase CheA-like, homodimeric domain LIT28_08025 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily LIT28_08025 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding LIT28_08025 IPR036061 CheW-like domain superfamily LIT28_08025 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily LIT28_08025 IPR002545 CheW-like domain LIT28_08030 IPR001543 Surface presentation of antigen (SpoA) LIT28_08030 IPR036429 SpoA-like superfamily LIT28_08030 IPR012826 Flagellar motor switch FliN LIT28_08030 IPR028976 CheC-like superfamily LIT28_08030 IPR007597 CheC-like protein LIT28_08030 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb LIT28_08045 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LIT28_08045 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LIT28_08045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_08045 IPR000780 MCP methyltransferase, CheR-type LIT28_08065 IPR001444 Flagellar basal body rod protein, N-terminal LIT28_08065 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LIT28_08065 IPR002371 Flagellar hook-associated protein 1 LIT28_08070 IPR013384 Flagellar hook-associated protein 3 LIT28_08070 IPR001029 Flagellin, D0/D1 domain LIT28_08075 IPR010810 Flagellin hook, IN motif LIT28_08075 IPR040026 Flagellar hook-associated protein 2 LIT28_08075 IPR010809 Flagellar hook-associated protein 2, C-terminal LIT28_08075 IPR003481 Flagellar hook-associated protein 2, N-terminal LIT28_08090 IPR006300 Flagellar basal-body rod protein FlgB LIT28_08090 IPR001444 Flagellar basal body rod protein, N-terminal LIT28_08095 IPR006299 Flagellar basal-body rod protein FlgC LIT28_08095 IPR001444 Flagellar basal body rod protein, N-terminal LIT28_08095 IPR019776 Flagellar basal body rod protein, conserved site LIT28_08095 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LIT28_08100 IPR001624 Flagellar hook-basal body complex protein FliE LIT28_08105 IPR006182 Secretory protein YscJ/FliF LIT28_08105 IPR000067 Flagellar M-ring protein FliF LIT28_08105 IPR013556 Flagellar M-ring C-terminal LIT28_08110 IPR011002 Flagellar motor switch protein FliG, alpha-helical LIT28_08110 IPR023087 Flagellar motor switch protein FliG, C-terminal LIT28_08110 IPR000090 Flagellar motor switch protein FliG LIT28_08110 IPR028263 Flagellar motor switch protein FliG, N-terminal domain LIT28_08110 IPR032779 Flagellar motor switch protein FliG, middle domain LIT28_08120 IPR000225 Armadillo LIT28_08120 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LIT28_08120 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LIT28_08120 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LIT28_08120 IPR032463 ATPase, type III secretion system, FliI LIT28_08120 IPR022425 Flagellar export ATPase FliI, clade 2 LIT28_08120 IPR040627 T3SS EscN ATPase, C-terminal LIT28_08120 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_08120 IPR005714 ATPase, type III secretion system, FliI/YscN LIT28_08120 IPR003593 AAA+ ATPase domain LIT28_08140 IPR019776 Flagellar basal body rod protein, conserved site LIT28_08140 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LIT28_08140 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LIT28_08140 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LIT28_08140 IPR011491 Flagellar hook protein FlgE LIT28_08140 IPR037058 Flagellar hook protein FlgE superfamily LIT28_08140 IPR001444 Flagellar basal body rod protein, N-terminal LIT28_08155 IPR001789 Signal transduction response regulator, receiver domain LIT28_08155 IPR002545 CheW-like domain LIT28_08155 IPR036061 CheW-like domain superfamily LIT28_08155 IPR024181 Chemotaxis response regulator CheV LIT28_08155 IPR011006 CheY-like superfamily LIT28_08160 IPR021009 Motility repressor MogR, DNA-dinding domain LIT28_08160 IPR038245 MogR, N-terminal domain superfamily LIT28_08165 IPR001492 Flagellin LIT28_08165 IPR001029 Flagellin, D0/D1 domain LIT28_08170 IPR001029 Flagellin, D0/D1 domain LIT28_08170 IPR001492 Flagellin LIT28_08175 IPR023346 Lysozyme-like domain superfamily LIT28_08175 IPR000189 Prokaryotic transglycosylase, active site LIT28_08175 IPR008258 Transglycosylase SLT domain 1 LIT28_08185 IPR028976 CheC-like superfamily LIT28_08185 IPR001689 Flagellar motor switch protein FliM LIT28_08185 IPR001543 Surface presentation of antigen (SpoA) LIT28_08185 IPR036429 SpoA-like superfamily LIT28_08190 IPR036429 SpoA-like superfamily LIT28_08190 IPR007597 CheC-like protein LIT28_08190 IPR028976 CheC-like superfamily LIT28_08190 IPR012826 Flagellar motor switch FliN LIT28_08190 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb LIT28_08190 IPR001543 Surface presentation of antigen (SpoA) LIT28_08200 IPR005837 Flagellar transport protein FliP LIT28_08200 IPR005838 Type III secretion system inner membrane P protein LIT28_08205 IPR006305 Flagellar biosynthesis protein FliQ LIT28_08205 IPR002191 Bacterial export protein family 3 LIT28_08215 IPR006135 Type III secretion system substrate exporter LIT28_08215 IPR029025 Type III secretion system substrate exporter, C-terminal LIT28_08215 IPR006136 Flagellar biosynthetic protein FlhB LIT28_08220 IPR001712 Type III secretion system FHIPEP LIT28_08220 IPR006301 Flagellar biosynthesis protein FlhA LIT28_08220 IPR042193 FHIPEP, domain 3 LIT28_08220 IPR042194 FHIPEP, domain 1 LIT28_08220 IPR025505 FHIPEP conserved site LIT28_08220 IPR042196 FHIPEP, domain 4 LIT28_08225 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LIT28_08225 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_08225 IPR020006 Flagellar biosynthesis protein FlhF LIT28_08230 IPR019776 Flagellar basal body rod protein, conserved site LIT28_08230 IPR001444 Flagellar basal body rod protein, N-terminal LIT28_08230 IPR012836 Flagellar basal-body rod FlgF LIT28_08230 IPR020013 Flagellar hook-basal body protein, FlgE/F/G LIT28_08230 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LIT28_08230 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like LIT28_08235 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LIT28_08235 IPR003156 DHHA1 domain LIT28_08235 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria LIT28_08235 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_08235 IPR002318 Alanine-tRNA ligase, class IIc LIT28_08235 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain LIT28_08235 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal LIT28_08235 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LIT28_08235 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily LIT28_08280 IPR011008 Dimeric alpha-beta barrel LIT28_08280 IPR007138 Antibiotic biosynthesis monooxygenase domain LIT28_08285 IPR012610 Small acid-soluble spore protein, SspH LIT28_08305 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_08305 IPR000847 Transcription regulator HTH, LysR LIT28_08305 IPR036390 Winged helix DNA-binding domain superfamily LIT28_08305 IPR005119 LysR, substrate-binding LIT28_08310 IPR017871 ABC transporter, conserved site LIT28_08310 IPR003439 ABC transporter-like LIT28_08310 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA LIT28_08310 IPR003593 AAA+ ATPase domain LIT28_08310 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_08310 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit LIT28_08310 IPR013611 Transport-associated OB, type 2 LIT28_08310 IPR008995 Molybdate/tungstate binding, C-terminal LIT28_08315 IPR005950 Molybdate ABC transporter, substrate-binding protein LIT28_08315 IPR041879 YvgL-like, substrate binding domain LIT28_08320 IPR017661 2-aminoethylphosphonate ABC transport system, membrane component PhnV LIT28_08320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_08320 IPR035906 MetI-like superfamily LIT28_08325 IPR001279 Metallo-beta-lactamase LIT28_08325 IPR013471 Ribonuclease Z/BN LIT28_08325 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_08335 IPR019723 Uncharacterised protein, YfmQ LIT28_08360 IPR024976 Domain of unknown function DUF3885 LIT28_08365 IPR029033 Histidine phosphatase superfamily LIT28_08365 IPR013078 Histidine phosphatase superfamily, clade-1 LIT28_08375 IPR029058 Alpha/Beta hydrolase fold LIT28_08375 IPR000073 Alpha/beta hydrolase fold-1 LIT28_08375 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase LIT28_08385 IPR036390 Winged helix DNA-binding domain superfamily LIT28_08385 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_08385 IPR000835 MarR-type HTH domain LIT28_08395 IPR029055 Nucleophile aminohydrolases, N-terminal LIT28_08395 IPR001962 Asparagine synthase LIT28_08395 IPR006426 Asparagine synthase, glutamine-hydrolyzing LIT28_08395 IPR017932 Glutamine amidotransferase type 2 domain LIT28_08395 IPR033738 Asparagine synthase, N-terminal domain LIT28_08415 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LIT28_08415 IPR027469 Cation efflux transmembrane domain superfamily LIT28_08415 IPR002524 Cation efflux protein LIT28_08415 IPR027470 Cation efflux protein, cytoplasmic domain LIT28_08425 IPR000524 Transcription regulator HTH, GntR LIT28_08425 IPR000485 AsnC-type HTH domain LIT28_08425 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_08425 IPR008920 Transcription regulator FadR/GntR, C-terminal LIT28_08425 IPR036390 Winged helix DNA-binding domain superfamily LIT28_08425 IPR011711 GntR, C-terminal LIT28_08430 IPR000620 EamA domain LIT28_08440 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LIT28_08440 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LIT28_08440 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_08445 IPR005524 Predicted permease DUF318 LIT28_08455 IPR001173 Glycosyltransferase 2-like LIT28_08455 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_08455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_08460 IPR004770 Na+/H+ antiporter NhaC LIT28_08460 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LIT28_08465 IPR009061 Putative DNA-binding domain superfamily LIT28_08465 IPR000551 MerR-type HTH domain LIT28_08470 IPR036291 NAD(P)-binding domain superfamily LIT28_08470 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_08470 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_08475 IPR005677 Fumarate hydratase, class II LIT28_08475 IPR024083 Fumarase/histidase, N-terminal LIT28_08475 IPR018951 Fumarase C, C-terminal LIT28_08475 IPR020557 Fumarate lyase, conserved site LIT28_08475 IPR000362 Fumarate lyase family LIT28_08475 IPR022761 Fumarate lyase, N-terminal LIT28_08475 IPR008948 L-Aspartase-like LIT28_08485 IPR001279 Metallo-beta-lactamase LIT28_08485 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_08495 IPR002528 Multi antimicrobial extrusion protein LIT28_08500 IPR029062 Class I glutamine amidotransferase-like LIT28_08500 IPR005320 Peptidase S51 LIT28_08520 IPR003834 Cytochrome C biogenesis protein, transmembrane domain LIT28_08525 IPR013766 Thioredoxin domain LIT28_08525 IPR036249 Thioredoxin-like superfamily LIT28_08525 IPR023555 Thiol-disulphide oxidoreductase ResA LIT28_08525 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIT28_08540 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_08540 IPR011780 D-serine ammonia-lyase LIT28_08540 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_08540 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LIT28_08545 IPR007383 Protein of unknown function DUF445 LIT28_08570 IPR000792 Transcription regulator LuxR, C-terminal LIT28_08570 IPR011006 CheY-like superfamily LIT28_08570 IPR001789 Signal transduction response regulator, receiver domain LIT28_08570 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_08575 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_08575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_08575 IPR003018 GAF domain LIT28_08575 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LIT28_08575 IPR029016 GAF-like domain superfamily LIT28_08580 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_08580 IPR017871 ABC transporter, conserved site LIT28_08580 IPR003439 ABC transporter-like LIT28_08580 IPR003593 AAA+ ATPase domain LIT28_08595 IPR001736 Phospholipase D/Transphosphatidylase LIT28_08595 IPR022924 Cardiolipin synthase LIT28_08595 IPR025202 Phospholipase D-like domain LIT28_08600 IPR015963 Uridylate kinase, bacteria LIT28_08600 IPR011817 Uridylate kinase LIT28_08600 IPR001048 Aspartate/glutamate/uridylate kinase LIT28_08600 IPR036393 Acetylglutamate kinase-like superfamily LIT28_08605 IPR001991 Sodium:dicarboxylate symporter LIT28_08605 IPR018107 Sodium:dicarboxylate symporter, conserved site LIT28_08605 IPR036458 Sodium:dicarboxylate symporter superfamily LIT28_08605 IPR033380 Glutamate-aspartate symport protein GltP/GltT LIT28_08610 IPR004708 Aspartate ammonia-lyase LIT28_08610 IPR008948 L-Aspartase-like LIT28_08610 IPR022761 Fumarate lyase, N-terminal LIT28_08610 IPR000362 Fumarate lyase family LIT28_08610 IPR024083 Fumarase/histidase, N-terminal LIT28_08610 IPR018951 Fumarase C, C-terminal LIT28_08610 IPR020557 Fumarate lyase, conserved site LIT28_08615 IPR012302 Malic enzyme, NAD-binding LIT28_08615 IPR001891 Malic oxidoreductase LIT28_08615 IPR036291 NAD(P)-binding domain superfamily LIT28_08615 IPR037062 Malic enzyme, N-terminal domain superfamily LIT28_08615 IPR012301 Malic enzyme, N-terminal domain LIT28_08615 IPR015884 Malic enzyme, conserved site LIT28_08620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_08620 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_08620 IPR005467 Histidine kinase domain LIT28_08620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_08625 IPR011006 CheY-like superfamily LIT28_08625 IPR013972 YcbB domain LIT28_08625 IPR001789 Signal transduction response regulator, receiver domain LIT28_08630 IPR000330 SNF2-related, N-terminal domain LIT28_08630 IPR038718 SNF2-like, N-terminal domain superfamily LIT28_08630 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_08630 IPR001650 Helicase, C-terminal LIT28_08630 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_08630 IPR022138 Helicase SWF/SNF-related LIT28_08640 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_08640 IPR004618 Aspartate--ammonia ligase LIT28_08655 IPR036393 Acetylglutamate kinase-like superfamily LIT28_08655 IPR002912 ACT domain LIT28_08655 IPR041740 Aspartokinase catalytic domain LIT28_08655 IPR001048 Aspartate/glutamate/uridylate kinase LIT28_08655 IPR005260 Aspartate kinase, monofunctional class LIT28_08655 IPR001341 Aspartate kinase LIT28_08655 IPR018042 Aspartate kinase, conserved site LIT28_08655 IPR027795 CASTOR, ACT domain LIT28_08665 IPR025311 Domain of unknown function DUF4166 LIT28_08670 IPR025450 YndJ-like protein LIT28_08675 IPR003562 Mutator MutX protein LIT28_08675 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_08675 IPR020084 NUDIX hydrolase, conserved site LIT28_08675 IPR000086 NUDIX hydrolase domain LIT28_08680 IPR003343 Bacterial Ig-like, group 2 LIT28_08680 IPR008964 Invasin/intimin cell-adhesion fragments LIT28_08680 IPR032812 SbsA, Ig-like domain LIT28_08680 IPR001119 S-layer homology domain LIT28_08690 IPR022324 Bacilysin exporter BacE, putative LIT28_08690 IPR011701 Major facilitator superfamily LIT28_08690 IPR036259 MFS transporter superfamily LIT28_08710 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_08710 IPR022489 Polyphosphate:AMP phosphotransferase LIT28_08710 IPR022488 Polyphosphate kinase-2-related LIT28_08715 IPR036390 Winged helix DNA-binding domain superfamily LIT28_08715 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_08715 IPR005149 Transcription regulator PadR, N-terminal LIT28_08715 IPR018309 Transcription regulator PadR, C-terminal LIT28_08720 IPR020846 Major facilitator superfamily domain LIT28_08720 IPR036259 MFS transporter superfamily LIT28_08720 IPR005829 Sugar transporter, conserved site LIT28_08720 IPR004638 Drug resistance transporter EmrB-like LIT28_08720 IPR011701 Major facilitator superfamily LIT28_08725 IPR011701 Major facilitator superfamily LIT28_08725 IPR020846 Major facilitator superfamily domain LIT28_08725 IPR036259 MFS transporter superfamily LIT28_08730 IPR016039 Thiolase-like LIT28_08730 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIT28_08730 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LIT28_08730 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LIT28_08740 IPR016496 GTPase HflX LIT28_08740 IPR032305 GTP-binding protein, middle domain LIT28_08740 IPR006073 GTP binding domain LIT28_08740 IPR025121 GTPase HflX, N-terminal LIT28_08740 IPR042108 GTPase HflX, N-terminal domain superfamily LIT28_08740 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_08740 IPR030394 HflX-type guanine nucleotide-binding (G) domain LIT28_08745 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_08745 IPR039424 Solute-binding protein family 5 LIT28_08745 IPR023765 Solute-binding protein family 5, conserved site LIT28_08745 IPR000914 Solute-binding protein family 5 domain LIT28_08750 IPR011701 Major facilitator superfamily LIT28_08750 IPR020846 Major facilitator superfamily domain LIT28_08750 IPR036259 MFS transporter superfamily LIT28_08755 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_08755 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_08755 IPR005856 Cysteine synthase LIT28_08755 IPR005859 Cysteine synthase CysK LIT28_08755 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site LIT28_08775 IPR037272 Sodium:neurotransmitter symporter superfamily LIT28_08775 IPR000175 Sodium:neurotransmitter symporter LIT28_08780 IPR013319 Glycoside hydrolase family 11/12 LIT28_08780 IPR018208 Glycoside hydrolase family 11, active site 1 LIT28_08780 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily LIT28_08780 IPR008979 Galactose-binding-like domain superfamily LIT28_08780 IPR002509 NodB homology domain LIT28_08780 IPR001137 Glycoside hydrolase family 11 LIT28_08780 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_08780 IPR033123 Glycosyl hydrolases family 11 (GH11) domain LIT28_08780 IPR033119 Glycoside hydrolase family 11, active site 2 LIT28_08780 IPR005084 Carbohydrate binding module family 6 LIT28_08785 IPR009057 Homeobox-like domain superfamily LIT28_08790 IPR007353 Protein of unknown function DUF421 LIT28_08790 IPR023090 UPF0702, alpha/beta domain superfamily LIT28_08810 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily LIT28_08810 IPR002569 Peptide methionine sulphoxide reductase MsrA LIT28_08815 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_08815 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIT28_08815 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_08815 IPR036291 NAD(P)-binding domain superfamily LIT28_08820 IPR033939 Branched-chain aminotransferase LIT28_08820 IPR005785 Branched-chain amino acid aminotransferase I LIT28_08820 IPR036038 Aminotransferase-like, PLP-dependent enzymes LIT28_08820 IPR018300 Aminotransferase, class IV, conserved site LIT28_08820 IPR001544 Aminotransferase class IV LIT28_08825 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIT28_08825 IPR012000 Thiamine pyrophosphate enzyme, central domain LIT28_08825 IPR029061 Thiamin diphosphate-binding fold LIT28_08825 IPR039368 Acetolactate synthase large subunit, TPP binding domain LIT28_08825 IPR012846 Acetolactate synthase, large subunit, biosynthetic LIT28_08825 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LIT28_08825 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LIT28_08835 IPR036291 NAD(P)-binding domain superfamily LIT28_08835 IPR014359 Ketol-acid reductoisomerase, prokaryotic LIT28_08835 IPR013116 Ketol-acid reductoisomerase, N-terminal LIT28_08835 IPR000506 Ketol-acid reductoisomerase, C-terminal LIT28_08835 IPR013023 Ketol-acid reductoisomerase LIT28_08835 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_08840 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site LIT28_08840 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase LIT28_08840 IPR004404 Dihydroxy-acid dehydratase LIT28_08840 IPR042096 Dihydroxy-acid dehydratase, C-terminal LIT28_08840 IPR037237 IlvD/EDD, N-terminal domain LIT28_08845 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_08845 IPR011820 L-threonine dehydratase biosynthetic IlvA LIT28_08845 IPR001721 Threonine dehydratase, ACT-like domain LIT28_08845 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LIT28_08845 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_08845 IPR038110 Threonine dehydratase, ACT-like domain superfamily LIT28_08855 IPR019079 Capsule synthesis protein, CapA LIT28_08855 IPR029052 Metallo-dependent phosphatase-like LIT28_08870 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIT28_08870 IPR011701 Major facilitator superfamily LIT28_08870 IPR036259 MFS transporter superfamily LIT28_08870 IPR020846 Major facilitator superfamily domain LIT28_08870 IPR023692 Multidrug resistance protein MdtG LIT28_08875 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type LIT28_08875 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B LIT28_08885 IPR010049 MTA/SAH nucleosidase LIT28_08885 IPR035994 Nucleoside phosphorylase superfamily LIT28_08885 IPR000845 Nucleoside phosphorylase domain LIT28_08890 IPR001789 Signal transduction response regulator, receiver domain LIT28_08890 IPR007492 LytTR DNA-binding domain LIT28_08890 IPR011006 CheY-like superfamily LIT28_08895 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain LIT28_08895 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily LIT28_08895 IPR003702 Acetyl-CoA hydrolase/transferase LIT28_08895 IPR037171 NagB/RpiA transferase-like LIT28_08895 IPR017821 Succinate CoA transferase LIT28_08910 IPR032466 Metal-dependent hydrolase LIT28_08910 IPR006680 Amidohydrolase-related LIT28_08910 IPR023512 Deaminase MtaD/DadD LIT28_08910 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_08915 IPR029058 Alpha/Beta hydrolase fold LIT28_08915 IPR024981 Domain of unknown function DUF3887 LIT28_08915 IPR022742 Serine aminopeptidase, S33 LIT28_08920 IPR039424 Solute-binding protein family 5 LIT28_08920 IPR023765 Solute-binding protein family 5, conserved site LIT28_08920 IPR000914 Solute-binding protein family 5 domain LIT28_08920 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_08945 IPR023885 4Fe4S-binding SPASM domain LIT28_08945 IPR013785 Aldolase-type TIM barrel LIT28_08945 IPR034391 Cmo-like SPASM domain containing LIT28_08945 IPR006638 Elp3/MiaB/NifB LIT28_08945 IPR017200 Coenzyme PQQ synthesis protein E LIT28_08945 IPR007197 Radical SAM LIT28_08945 IPR030896 Heme b synthase LIT28_08950 IPR016181 Acyl-CoA N-acyltransferase LIT28_08950 IPR000182 GNAT domain LIT28_08955 IPR001789 Signal transduction response regulator, receiver domain LIT28_08955 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_08955 IPR011006 CheY-like superfamily LIT28_08955 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_08955 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_08955 IPR039420 Transcriptional regulatory protein WalR-like LIT28_08960 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_08960 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_08960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_08960 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_08960 IPR005467 Histidine kinase domain LIT28_08960 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_08970 IPR001046 NRAMP family LIT28_08975 IPR001763 Rhodanese-like domain LIT28_08975 IPR036873 Rhodanese-like domain superfamily LIT28_08975 IPR022111 Rhodanase, C-terminal LIT28_08975 IPR020936 Uncharacterised protein family UPF0176 LIT28_08975 IPR040503 UPF0176, acylphosphatase-like domain LIT28_08985 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_08985 IPR003710 Ketopantoate reductase ApbA/PanE LIT28_08985 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_08985 IPR013752 Ketopantoate reductase, C-terminal domain LIT28_08985 IPR036291 NAD(P)-binding domain superfamily LIT28_08985 IPR013332 Ketopantoate reductase, N-terminal domain LIT28_08990 IPR002293 Amino acid/polyamine transporter I LIT28_09000 IPR008414 Hemolysin BL-binding component LIT28_09005 IPR008414 Hemolysin BL-binding component LIT28_09015 IPR012338 Beta-lactamase/transpeptidase-like LIT28_09015 IPR001466 Beta-lactamase-related LIT28_09020 IPR012338 Beta-lactamase/transpeptidase-like LIT28_09020 IPR001466 Beta-lactamase-related LIT28_09030 IPR011006 CheY-like superfamily LIT28_09030 IPR001789 Signal transduction response regulator, receiver domain LIT28_09030 IPR000792 Transcription regulator LuxR, C-terminal LIT28_09030 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_09035 IPR012338 Beta-lactamase/transpeptidase-like LIT28_09035 IPR021860 Peptidase S12, Pab87-related, C-terminal LIT28_09035 IPR001466 Beta-lactamase-related LIT28_09040 IPR007324 Sugar-binding domain, putative LIT28_09040 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_09040 IPR037171 NagB/RpiA transferase-like LIT28_09045 IPR028581 Deoxyribose-phosphate aldolase type I LIT28_09045 IPR011343 Deoxyribose-phosphate aldolase LIT28_09045 IPR002915 DeoC/FbaB/ lacD aldolase LIT28_09045 IPR013785 Aldolase-type TIM barrel LIT28_09050 IPR002668 Concentrative nucleoside transporter N-terminal domain LIT28_09050 IPR008276 Concentrative nucleoside transporter LIT28_09050 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LIT28_09050 IPR011657 Concentrative nucleoside transporter C-terminal domain LIT28_09055 IPR017459 Glycosyl transferase family 3, N-terminal domain LIT28_09055 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LIT28_09055 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LIT28_09055 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily LIT28_09055 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase LIT28_09055 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic LIT28_09055 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal LIT28_09055 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site LIT28_09055 IPR000312 Glycosyl transferase, family 3 LIT28_09060 IPR016193 Cytidine deaminase-like LIT28_09060 IPR006262 Cytidine deaminase, homotetrameric LIT28_09060 IPR002125 Cytidine and deoxycytidylate deaminase domain LIT28_09065 IPR031306 CcdC protein LIT28_09070 IPR009242 Protein of unknown function DUF896 LIT28_09090 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LIT28_09090 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LIT28_09090 IPR007865 Aminopeptidase P, N-terminal LIT28_09090 IPR000994 Peptidase M24 LIT28_09090 IPR036005 Creatinase/aminopeptidase-like LIT28_09090 IPR001714 Peptidase M24, methionine aminopeptidase LIT28_09100 IPR011055 Duplicated hybrid motif LIT28_09100 IPR016047 Peptidase M23 LIT28_09125 IPR001584 Integrase, catalytic core LIT28_09125 IPR036397 Ribonuclease H superfamily LIT28_09125 IPR032874 DDE domain LIT28_09125 IPR012337 Ribonuclease H-like superfamily LIT28_09140 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_09140 IPR017871 ABC transporter, conserved site LIT28_09140 IPR003439 ABC transporter-like LIT28_09140 IPR003593 AAA+ ATPase domain LIT28_09145 IPR023214 HAD superfamily LIT28_09145 IPR036412 HAD-like superfamily LIT28_09145 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_09155 IPR006162 Phosphopantetheine attachment site LIT28_09155 IPR009081 Phosphopantetheine binding ACP domain LIT28_09155 IPR010060 Non-ribosomal peptide synthase LIT28_09155 IPR001242 Condensation domain LIT28_09155 IPR000873 AMP-dependent synthetase/ligase LIT28_09155 IPR010071 Amino acid adenylation domain LIT28_09155 IPR036736 ACP-like superfamily LIT28_09155 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_09155 IPR020845 AMP-binding, conserved site LIT28_09155 IPR020459 AMP-binding LIT28_09155 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_09160 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LIT28_09160 IPR029066 PLP-binding barrel LIT28_09160 IPR000183 Ornithine/DAP/Arg decarboxylase LIT28_09160 IPR002986 Diaminopimelate decarboxylase, LysA LIT28_09160 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site LIT28_09160 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal LIT28_09160 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal LIT28_09165 IPR036736 ACP-like superfamily LIT28_09165 IPR003230 D-alanyl carrier protein LIT28_09165 IPR009081 Phosphopantetheine binding ACP domain LIT28_09175 IPR011251 Luciferase-like domain LIT28_09175 IPR036661 Luciferase-like domain superfamily LIT28_09225 IPR016040 NAD(P)-binding domain LIT28_09225 IPR036291 NAD(P)-binding domain superfamily LIT28_09225 IPR005886 UDP-glucose 4-epimerase LIT28_09250 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_09250 IPR036291 NAD(P)-binding domain superfamily LIT28_09250 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_09275 IPR036397 Ribonuclease H superfamily LIT28_09275 IPR012337 Ribonuclease H-like superfamily LIT28_09275 IPR001584 Integrase, catalytic core LIT28_09275 IPR032874 DDE domain LIT28_09280 IPR002104 Integrase, catalytic domain LIT28_09280 IPR013762 Integrase-like, catalytic domain superfamily LIT28_09280 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_09280 IPR011931 Tyrosine recombinase XerC LIT28_09280 IPR004107 Integrase, SAM-like, N-terminal LIT28_09280 IPR010998 Integrase/recombinase, N-terminal LIT28_09280 IPR023009 Tyrosine recombinase XerC/XerD LIT28_09285 IPR000380 DNA topoisomerase, type IA LIT28_09285 IPR003601 DNA topoisomerase, type IA, domain 2 LIT28_09285 IPR023406 DNA topoisomerase, type IA, active site LIT28_09285 IPR013497 DNA topoisomerase, type IA, central LIT28_09285 IPR034144 DNA topoisomerase 3-like, TOPRIM domain LIT28_09285 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LIT28_09285 IPR006171 TOPRIM domain LIT28_09285 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LIT28_09285 IPR023405 DNA topoisomerase, type IA, core domain LIT28_09285 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LIT28_09285 IPR005738 DNA topoisomerase III LIT28_09285 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LIT28_09340 IPR029039 Flavoprotein-like superfamily LIT28_09340 IPR003680 Flavodoxin-like fold LIT28_09340 IPR023048 NADH-azoreductase, FMN-dependent LIT28_09345 IPR004685 Branched-chain amino acid transport system II carrier protein LIT28_09355 IPR032694 Copper transport protein C/D LIT28_09355 IPR008457 Copper resistance protein D LIT28_09355 IPR014756 Immunoglobulin E-set LIT28_09355 IPR032693 YtkA-like domain LIT28_09355 IPR007348 CopC domain LIT28_09360 IPR038507 YcnI-like superfamily LIT28_09360 IPR012533 YcnI-like LIT28_09370 IPR000620 EamA domain LIT28_09375 IPR036390 Winged helix DNA-binding domain superfamily LIT28_09375 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_09375 IPR005119 LysR, substrate-binding LIT28_09375 IPR000847 Transcription regulator HTH, LysR LIT28_09380 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_09380 IPR036390 Winged helix DNA-binding domain superfamily LIT28_09380 IPR000944 Transcription regulator Rrf2-type LIT28_09385 IPR001853 DSBA-like thioredoxin domain LIT28_09385 IPR036249 Thioredoxin-like superfamily LIT28_09390 IPR029479 Nitroreductase LIT28_09390 IPR000415 Nitroreductase-like LIT28_09395 IPR020556 Amidase, conserved site LIT28_09395 IPR023631 Amidase signature domain LIT28_09395 IPR036928 Amidase signature (AS) superfamily LIT28_09395 IPR000120 Amidase LIT28_09395 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit LIT28_09400 IPR002549 Transmembrane protein TqsA-like LIT28_09405 IPR022383 Lactate/malate dehydrogenase, C-terminal LIT28_09405 IPR036291 NAD(P)-binding domain superfamily LIT28_09405 IPR018177 L-lactate dehydrogenase, active site LIT28_09405 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LIT28_09405 IPR011304 L-lactate dehydrogenase LIT28_09405 IPR001557 L-lactate/malate dehydrogenase LIT28_09405 IPR001236 Lactate/malate dehydrogenase, N-terminal LIT28_09410 IPR002937 Amine oxidase LIT28_09410 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_09410 IPR001613 Flavin amine oxidase LIT28_09415 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LIT28_09415 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_09415 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LIT28_09430 IPR000873 AMP-dependent synthetase/ligase LIT28_09430 IPR042099 AMP-dependent synthetase-like superfamily LIT28_09430 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_09430 IPR020845 AMP-binding, conserved site LIT28_09430 IPR010192 2-succinylbenzoate--CoA ligase LIT28_09435 IPR029069 HotDog domain superfamily LIT28_09435 IPR002539 MaoC-like dehydratase domain LIT28_09440 IPR016039 Thiolase-like LIT28_09440 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIT28_09440 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LIT28_09440 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LIT28_09455 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_09455 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LIT28_09455 IPR003439 ABC transporter-like LIT28_09455 IPR003593 AAA+ ATPase domain LIT28_09455 IPR017871 ABC transporter, conserved site LIT28_09460 IPR003593 AAA+ ATPase domain LIT28_09460 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein LIT28_09460 IPR003439 ABC transporter-like LIT28_09460 IPR017871 ABC transporter, conserved site LIT28_09460 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_09465 IPR001851 ABC transporter, permease LIT28_09475 IPR036390 Winged helix DNA-binding domain superfamily LIT28_09475 IPR005119 LysR, substrate-binding LIT28_09475 IPR000847 Transcription regulator HTH, LysR LIT28_09475 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_09485 IPR037479 Tautomerase, MSAD family LIT28_09485 IPR014347 Tautomerase/MIF superfamily LIT28_09495 IPR000835 MarR-type HTH domain LIT28_09495 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_09495 IPR036390 Winged helix DNA-binding domain superfamily LIT28_09495 IPR011991 ArsR-like helix-turn-helix domain LIT28_09505 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LIT28_09510 IPR003317 Cytochrome ubiquinol oxidase subunit 2 LIT28_09515 IPR039421 Type I protein exporter LIT28_09515 IPR003593 AAA+ ATPase domain LIT28_09515 IPR011527 ABC transporter type 1, transmembrane domain LIT28_09515 IPR017871 ABC transporter, conserved site LIT28_09515 IPR003439 ABC transporter-like LIT28_09515 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_09515 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD LIT28_09515 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_09520 IPR017871 ABC transporter, conserved site LIT28_09520 IPR003439 ABC transporter-like LIT28_09520 IPR003593 AAA+ ATPase domain LIT28_09520 IPR011527 ABC transporter type 1, transmembrane domain LIT28_09520 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC LIT28_09520 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_09520 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_09530 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_09530 IPR001173 Glycosyltransferase 2-like LIT28_09535 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LIT28_09535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_09535 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_09540 IPR001451 Hexapeptide repeat LIT28_09540 IPR011004 Trimeric LpxA-like superfamily LIT28_09555 IPR003507 Peptidase family S66 LIT28_09555 IPR040921 LD-carboxypeptidase, C-terminal LIT28_09555 IPR040449 LD-carboxypeptidase, N-terminal LIT28_09555 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal LIT28_09555 IPR029062 Class I glutamine amidotransferase-like LIT28_09555 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily LIT28_09560 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LIT28_09560 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIT28_09560 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIT28_09560 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LIT28_09560 IPR012338 Beta-lactamase/transpeptidase-like LIT28_09560 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIT28_09575 IPR036779 LysM domain superfamily LIT28_09575 IPR000064 Endopeptidase, NLPC/P60 domain LIT28_09575 IPR018392 LysM domain LIT28_09575 IPR038765 Papain-like cysteine peptidase superfamily LIT28_09585 IPR017871 ABC transporter, conserved site LIT28_09585 IPR003439 ABC transporter-like LIT28_09585 IPR003593 AAA+ ATPase domain LIT28_09585 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_09585 IPR039421 Type I protein exporter LIT28_09585 IPR011527 ABC transporter type 1, transmembrane domain LIT28_09585 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_09590 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_09590 IPR001789 Signal transduction response regulator, receiver domain LIT28_09590 IPR039420 Transcriptional regulatory protein WalR-like LIT28_09590 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_09590 IPR011006 CheY-like superfamily LIT28_09595 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_09595 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_09595 IPR005467 Histidine kinase domain LIT28_09595 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_09595 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_09595 IPR031967 PhoR, single Cache-like domain LIT28_09595 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_09595 IPR013767 PAS fold LIT28_09595 IPR035965 PAS domain superfamily LIT28_09595 IPR000014 PAS domain LIT28_09605 IPR036291 NAD(P)-binding domain superfamily LIT28_09605 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_09605 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_09610 IPR002935 Class I-like SAM-dependent O-methyltransferase LIT28_09610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_09615 IPR007530 Aminoglycoside 6-adenylyltransferase LIT28_09620 IPR002509 NodB homology domain LIT28_09620 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_09635 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding LIT28_09635 IPR002912 ACT domain LIT28_09635 IPR036291 NAD(P)-binding domain superfamily LIT28_09635 IPR019811 Homoserine dehydrogenase, conserved site LIT28_09635 IPR001342 Homoserine dehydrogenase, catalytic LIT28_09635 IPR016204 Homoserine dehydrogenase LIT28_09640 IPR004450 Threonine synthase-like LIT28_09640 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_09640 IPR026260 Threonine synthase, bacterial/archaeal LIT28_09640 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_09640 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LIT28_09645 IPR013750 GHMP kinase, C-terminal domain LIT28_09645 IPR036554 GHMP kinase, C-terminal domain superfamily LIT28_09645 IPR006204 GHMP kinase N-terminal domain LIT28_09645 IPR006203 GHMP kinase, ATP-binding, conserved site LIT28_09645 IPR000870 Homoserine kinase LIT28_09645 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_09645 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_09660 IPR004474 Cell envelope-related transcriptional attenuator domain LIT28_09670 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_09670 IPR039420 Transcriptional regulatory protein WalR-like LIT28_09670 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_09670 IPR001789 Signal transduction response regulator, receiver domain LIT28_09670 IPR011006 CheY-like superfamily LIT28_09670 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_09675 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_09675 IPR035965 PAS domain superfamily LIT28_09675 IPR031967 PhoR, single Cache-like domain LIT28_09675 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_09675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_09675 IPR005467 Histidine kinase domain LIT28_09675 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_09675 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_09675 IPR000014 PAS domain LIT28_09675 IPR013767 PAS fold LIT28_09680 IPR002509 NodB homology domain LIT28_09680 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_09690 IPR003416 MgtC/SapB/SrpB/YhiD family LIT28_09695 IPR016181 Acyl-CoA N-acyltransferase LIT28_09695 IPR000182 GNAT domain LIT28_09700 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like LIT28_09700 IPR022770 Ferric iron reductase FhuF domain LIT28_09700 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal LIT28_09705 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like LIT28_09705 IPR022770 Ferric iron reductase FhuF domain LIT28_09705 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal LIT28_09710 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_09710 IPR042099 AMP-dependent synthetase-like superfamily LIT28_09710 IPR000873 AMP-dependent synthetase/ligase LIT28_09710 IPR020845 AMP-binding, conserved site LIT28_09715 IPR009081 Phosphopantetheine binding ACP domain LIT28_09715 IPR036736 ACP-like superfamily LIT28_09725 IPR036237 Xylose isomerase-like superfamily LIT28_09725 IPR013022 Xylose isomerase-like, TIM barrel domain LIT28_09730 IPR038300 SASP, alpha/beta-type superfamily LIT28_09730 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_09730 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_09735 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIT28_09735 IPR036259 MFS transporter superfamily LIT28_09735 IPR011701 Major facilitator superfamily LIT28_09735 IPR020846 Major facilitator superfamily domain LIT28_09740 IPR001123 Amino acid exporter protein, LeuE-type LIT28_09745 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_09745 IPR036390 Winged helix DNA-binding domain superfamily LIT28_09745 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_09745 IPR000524 Transcription regulator HTH, GntR LIT28_09745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_09745 IPR004839 Aminotransferase, class I/classII LIT28_09745 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_09755 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LIT28_09755 IPR002641 Patatin-like phospholipase domain LIT28_09780 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_09780 IPR036412 HAD-like superfamily LIT28_09780 IPR000086 NUDIX hydrolase domain LIT28_09780 IPR020084 NUDIX hydrolase, conserved site LIT28_09780 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_09780 IPR020476 NUDIX hydrolase LIT28_09780 IPR023214 HAD superfamily LIT28_09785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_09785 IPR022926 NH(3)-dependent NAD(+) synthetase LIT28_09785 IPR003694 NAD(+) synthetase LIT28_09785 IPR022310 NAD/GMP synthase LIT28_09790 IPR027022 ABC transporter permease protein, BceB-type LIT28_09790 IPR003838 ABC transporter permease protein domain LIT28_09795 IPR037914 SpoVT-AbrB domain superfamily LIT28_09795 IPR007159 SpoVT-AbrB domain LIT28_09795 IPR040678 AbrB, C-terminal LIT28_09800 IPR000209 Peptidase S8/S53 domain LIT28_09800 IPR022398 Peptidase S8, subtilisin, His-active site LIT28_09800 IPR023828 Peptidase S8, subtilisin, Ser-active site LIT28_09800 IPR034202 Subtilisin Carlsberg-like catalytic domain LIT28_09800 IPR015500 Peptidase S8, subtilisin-related LIT28_09800 IPR023827 Peptidase S8, subtilisin, Asp-active site LIT28_09800 IPR036852 Peptidase S8/S53 domain superfamily LIT28_09805 IPR001845 HTH ArsR-type DNA-binding domain LIT28_09805 IPR011991 ArsR-like helix-turn-helix domain LIT28_09805 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_09805 IPR036390 Winged helix DNA-binding domain superfamily LIT28_09810 IPR023210 NADP-dependent oxidoreductase domain LIT28_09810 IPR018170 Aldo/keto reductase, conserved site LIT28_09810 IPR020471 Aldo/keto reductase LIT28_09810 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_09820 IPR008523 Protein of unknown function DUF805 LIT28_09840 IPR012340 Nucleic acid-binding, OB-fold LIT28_09840 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_09840 IPR010914 RsgA GTPase domain LIT28_09840 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain LIT28_09840 IPR004881 Ribosome biogenesis GTPase RsgA LIT28_09845 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding LIT28_09845 IPR029151 Periplasmic sensor-like domain superfamily LIT28_09845 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_09845 IPR033479 Double Cache domain 1 LIT28_09845 IPR003660 HAMP domain LIT28_09860 IPR038728 Uncharacterized membrane protein YkvI LIT28_09865 IPR008331 Ferritin/DPS protein domain LIT28_09865 IPR002177 DNA-binding protein Dps LIT28_09865 IPR023188 DNA-binding protein Dps, conserved site LIT28_09865 IPR012347 Ferritin-like LIT28_09865 IPR009078 Ferritin-like superfamily LIT28_09880 IPR019949 Luciferase family oxidoreductase, group 1 LIT28_09880 IPR036661 Luciferase-like domain superfamily LIT28_09880 IPR011251 Luciferase-like domain LIT28_09890 IPR002937 Amine oxidase LIT28_09890 IPR001613 Flavin amine oxidase LIT28_09890 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_09895 IPR016181 Acyl-CoA N-acyltransferase LIT28_09895 IPR000182 GNAT domain LIT28_09900 IPR020471 Aldo/keto reductase LIT28_09900 IPR023210 NADP-dependent oxidoreductase domain LIT28_09900 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_09905 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_09905 IPR036627 CobW-like, C-terminal domain superfamily LIT28_09905 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LIT28_09905 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LIT28_09910 IPR016181 Acyl-CoA N-acyltransferase LIT28_09910 IPR000182 GNAT domain LIT28_09910 IPR027455 Spermine/spermidine acetyltransferase, N-terminal LIT28_09935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_09935 IPR005467 Histidine kinase domain LIT28_09935 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LIT28_09935 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_09935 IPR029016 GAF-like domain superfamily LIT28_09935 IPR003018 GAF domain LIT28_09940 IPR011006 CheY-like superfamily LIT28_09940 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_09940 IPR001789 Signal transduction response regulator, receiver domain LIT28_09940 IPR000792 Transcription regulator LuxR, C-terminal LIT28_09945 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 LIT28_09945 IPR034213 Vpr-like peptidase, catalytic domain LIT28_09945 IPR015500 Peptidase S8, subtilisin-related LIT28_09945 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily LIT28_09945 IPR022398 Peptidase S8, subtilisin, His-active site LIT28_09945 IPR025965 FlgD Ig-like domain LIT28_09945 IPR023828 Peptidase S8, subtilisin, Ser-active site LIT28_09945 IPR023827 Peptidase S8, subtilisin, Asp-active site LIT28_09945 IPR000209 Peptidase S8/S53 domain LIT28_09945 IPR003137 PA domain LIT28_09945 IPR036852 Peptidase S8/S53 domain superfamily LIT28_09950 IPR022121 Peptidase M73, camelysin LIT28_09950 IPR023833 Signal peptide, camelysin LIT28_09985 IPR006129 Adhesin B LIT28_09985 IPR006128 Adhesion lipoprotein LIT28_09985 IPR006127 Periplasmic solute binding protein, ZnuA-like LIT28_09995 IPR036291 NAD(P)-binding domain superfamily LIT28_09995 IPR016040 NAD(P)-binding domain LIT28_09995 IPR000534 Semialdehyde dehydrogenase, NAD-binding LIT28_10000 IPR013785 Aldolase-type TIM barrel LIT28_10000 IPR023663 NADPH dehydrogenase LIT28_10000 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LIT28_10005 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_10005 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily LIT28_10005 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain LIT28_10005 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding LIT28_10005 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site LIT28_10005 IPR023546 Methylated-DNA--protein-cysteine methyltransferase LIT28_10005 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain LIT28_10015 IPR039424 Solute-binding protein family 5 LIT28_10015 IPR023765 Solute-binding protein family 5, conserved site LIT28_10015 IPR000914 Solute-binding protein family 5 domain LIT28_10015 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_10020 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_10020 IPR022858 Metallothiol transferase FosB LIT28_10020 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_10020 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_10030 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site LIT28_10030 IPR029033 Histidine phosphatase superfamily LIT28_10030 IPR013078 Histidine phosphatase superfamily, clade-1 LIT28_10040 IPR014867 Spore coat protein CotH LIT28_10045 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_10045 IPR000086 NUDIX hydrolase domain LIT28_10050 IPR032816 SNARE associated Golgi protein LIT28_10055 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type LIT28_10055 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LIT28_10055 IPR002797 Polysaccharide biosynthesis protein LIT28_10065 IPR005524 Predicted permease DUF318 LIT28_10070 IPR015402 Protein of unknown function DUF1980 LIT28_10075 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase LIT28_10075 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain LIT28_10075 IPR006683 Thioesterase domain LIT28_10075 IPR029069 HotDog domain superfamily LIT28_10085 IPR001736 Phospholipase D/Transphosphatidylase LIT28_10085 IPR025202 Phospholipase D-like domain LIT28_10085 IPR027379 Cardiolipin synthase N-terminal LIT28_10085 IPR022924 Cardiolipin synthase LIT28_10085 IPR030874 Cardiolipin synthase, Firmicutes-type LIT28_10100 IPR016040 NAD(P)-binding domain LIT28_10100 IPR036291 NAD(P)-binding domain superfamily LIT28_10105 IPR007403 Protein of unknown function DUF456 LIT28_10110 IPR016169 FAD-binding, type PCMH, subdomain 2 LIT28_10110 IPR000644 CBS domain LIT28_10110 IPR002550 CNNM, transmembrane domain LIT28_10110 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_10110 IPR005170 Transporter-associated domain LIT28_10125 IPR004685 Branched-chain amino acid transport system II carrier protein LIT28_10130 IPR008231 Probable chaperone CsaA LIT28_10130 IPR012340 Nucleic acid-binding, OB-fold LIT28_10130 IPR002547 tRNA-binding domain LIT28_10150 IPR010897 Sporulation stage II, protein P LIT28_10160 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LIT28_10160 IPR003709 Peptidase M15B LIT28_10165 IPR003561 Mutator MutT LIT28_10165 IPR020476 NUDIX hydrolase LIT28_10165 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_10165 IPR020084 NUDIX hydrolase, conserved site LIT28_10165 IPR000086 NUDIX hydrolase domain LIT28_10170 IPR020556 Amidase, conserved site LIT28_10170 IPR000120 Amidase LIT28_10170 IPR023631 Amidase signature domain LIT28_10170 IPR036928 Amidase signature (AS) superfamily LIT28_10170 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit LIT28_10175 IPR011701 Major facilitator superfamily LIT28_10175 IPR036259 MFS transporter superfamily LIT28_10185 IPR036013 Band 7/SPFH domain superfamily LIT28_10185 IPR018080 Band 7/stomatin-like, conserved site LIT28_10185 IPR001972 Stomatin family LIT28_10185 IPR001107 Band 7 domain LIT28_10190 IPR005952 Phosphoglycerate mutase 1 LIT28_10190 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site LIT28_10190 IPR013078 Histidine phosphatase superfamily, clade-1 LIT28_10190 IPR029033 Histidine phosphatase superfamily LIT28_10195 IPR000150 Cof family LIT28_10195 IPR036412 HAD-like superfamily LIT28_10195 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_10195 IPR023214 HAD superfamily LIT28_10200 IPR000835 MarR-type HTH domain LIT28_10200 IPR023187 Transcriptional regulator MarR-type, conserved site LIT28_10200 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_10200 IPR036390 Winged helix DNA-binding domain superfamily LIT28_10215 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site LIT28_10215 IPR000821 Alanine racemase LIT28_10215 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LIT28_10215 IPR011079 Alanine racemase, C-terminal LIT28_10215 IPR001608 Alanine racemase, N-terminal LIT28_10215 IPR029066 PLP-binding barrel LIT28_10220 IPR025714 Methyltransferase domain LIT28_10220 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LIT28_10220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_10235 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase LIT28_10235 IPR006326 UDP-glycosyltransferase, MGT LIT28_10240 IPR019264 Domain of unknown function DUF2179 LIT28_10240 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_10240 IPR003740 Uncharacterised membrane protein YitT LIT28_10245 IPR036390 Winged helix DNA-binding domain superfamily LIT28_10245 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_10245 IPR000524 Transcription regulator HTH, GntR LIT28_10245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_10245 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_10245 IPR004839 Aminotransferase, class I/classII LIT28_10270 IPR017813 Mycothiol acetyltransferase LIT28_10270 IPR016181 Acyl-CoA N-acyltransferase LIT28_10270 IPR000182 GNAT domain LIT28_10320 IPR014229 Sporulation protein YtfJ LIT28_10345 IPR013216 Methyltransferase type 11 LIT28_10345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_10350 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_10350 IPR000559 Formate-tetrahydrofolate ligase, FTHFS LIT28_10350 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site LIT28_10360 IPR011545 DEAD/DEAH box helicase domain LIT28_10360 IPR001650 Helicase, C-terminal LIT28_10360 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_10360 IPR014014 RNA helicase, DEAD-box type, Q motif LIT28_10360 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_10365 IPR013022 Xylose isomerase-like, TIM barrel domain LIT28_10365 IPR023952 Inosose dehydratase LIT28_10365 IPR030823 IolE/MocC family LIT28_10365 IPR036237 Xylose isomerase-like superfamily LIT28_10370 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_10370 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_10370 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_10380 IPR036291 NAD(P)-binding domain superfamily LIT28_10380 IPR011032 GroES-like superfamily LIT28_10380 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_10380 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_10380 IPR020843 Polyketide synthase, enoylreductase domain LIT28_10380 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site LIT28_10385 IPR014294 RNA polymerase sigma-W, bacillaceae LIT28_10385 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LIT28_10385 IPR014284 RNA polymerase sigma-70 like domain LIT28_10385 IPR007627 RNA polymerase sigma-70 region 2 LIT28_10385 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_10385 IPR013325 RNA polymerase sigma factor, region 2 LIT28_10385 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_10385 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_10385 IPR039425 RNA polymerase sigma-70 like LIT28_10405 IPR008254 Flavodoxin/nitric oxide synthase LIT28_10405 IPR002563 Flavin reductase like domain LIT28_10405 IPR001279 Metallo-beta-lactamase LIT28_10405 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_10405 IPR012349 FMN-binding split barrel LIT28_10405 IPR029039 Flavoprotein-like superfamily LIT28_10405 IPR001226 Flavodoxin, conserved site LIT28_10415 IPR036249 Thioredoxin-like superfamily LIT28_10415 IPR029760 Glutathione peroxidase conserved site LIT28_10415 IPR029759 Glutathione peroxidase active site LIT28_10415 IPR000889 Glutathione peroxidase LIT28_10420 IPR025403 Domain of unknown function DUF4129 LIT28_10420 IPR002931 Transglutaminase-like LIT28_10420 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal LIT28_10420 IPR038765 Papain-like cysteine peptidase superfamily LIT28_10425 IPR002881 Domain of unknown function DUF58 LIT28_10430 IPR041628 ChlI/MoxR, AAA lid domain LIT28_10430 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_10430 IPR011703 ATPase, AAA-3 LIT28_10445 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site LIT28_10445 IPR037943 Nitrate reductase alpha subunit-like, MopB domain LIT28_10445 IPR006657 Molybdopterin dinucleotide-binding domain LIT28_10445 IPR006656 Molybdopterin oxidoreductase LIT28_10445 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LIT28_10445 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site LIT28_10445 IPR009010 Aspartate decarboxylase-like domain superfamily LIT28_10445 IPR006468 Nitrate reductase, alpha subunit LIT28_10445 IPR028189 Nitrate reductase, alpha subunit, N-terminal LIT28_10450 IPR006547 Nitrate reductase, beta subunit LIT28_10450 IPR038262 Nitrate reductase beta, C-terminal domain superfamily LIT28_10450 IPR029263 Respiratory nitrate reductase beta, C-terminal LIT28_10450 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIT28_10455 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 LIT28_10455 IPR003765 Nitrate reductase chaperone, NarJ LIT28_10455 IPR036411 TorD-like superfamily LIT28_10455 IPR020945 DMSO/Nitrate reductase chaperone LIT28_10455 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 LIT28_10460 IPR003816 Nitrate reductase, gamma subunit LIT28_10460 IPR023234 NarG-like domain LIT28_10460 IPR036197 NarG-like superfamily LIT28_10465 IPR012318 Crp-type HTH domain LIT28_10465 IPR036390 Winged helix DNA-binding domain superfamily LIT28_10465 IPR018490 Cyclic nucleotide-binding-like LIT28_10465 IPR014710 RmlC-like jelly roll fold LIT28_10465 IPR018335 Transcription regulator HTH, Crp-type, conserved site LIT28_10465 IPR000595 Cyclic nucleotide-binding domain LIT28_10465 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_10470 IPR013785 Aldolase-type TIM barrel LIT28_10470 IPR007197 Radical SAM LIT28_10470 IPR013483 Molybdenum cofactor biosynthesis protein A LIT28_10470 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site LIT28_10470 IPR010505 Molybdenum cofactor synthesis C-terminal LIT28_10470 IPR006638 Elp3/MiaB/NifB LIT28_10475 IPR035985 Ubiquitin-activating enzyme LIT28_10475 IPR000594 THIF-type NAD/FAD binding fold LIT28_10480 IPR036425 MoaB/Mog-like domain superfamily LIT28_10480 IPR038987 Molybdopterin biosynthesis protein MoeA-like LIT28_10480 IPR036135 MoeA, N-terminal and linker domain superfamily LIT28_10480 IPR005111 MoeA, C-terminal, domain IV LIT28_10480 IPR036688 MoeA, C-terminal, domain IV superfamily LIT28_10480 IPR005110 MoeA, N-terminal and linker domain LIT28_10480 IPR001453 MoaB/Mog domain LIT28_10485 IPR003448 Molybdopterin biosynthesis MoaE LIT28_10485 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily LIT28_10495 IPR020846 Major facilitator superfamily domain LIT28_10495 IPR036259 MFS transporter superfamily LIT28_10495 IPR011701 Major facilitator superfamily LIT28_10520 IPR028161 Siroheme biosynthesis protein Met8 LIT28_10520 IPR036291 NAD(P)-binding domain superfamily LIT28_10520 IPR006367 Sirohaem synthase, N-terminal LIT28_10525 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX LIT28_10530 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site LIT28_10530 IPR014776 Tetrapyrrole methylase, subdomain 2 LIT28_10530 IPR014777 Tetrapyrrole methylase, subdomain 1 LIT28_10530 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily LIT28_10530 IPR000878 Tetrapyrrole methylase LIT28_10530 IPR006366 Uroporphyrin-III C-methyltransferase LIT28_10530 IPR035996 Tetrapyrrole methylase superfamily LIT28_10535 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type LIT28_10535 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LIT28_10535 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LIT28_10540 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LIT28_10540 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_10540 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain LIT28_10540 IPR007419 BFD-like [2Fe-2S]-binding domain LIT28_10540 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal LIT28_10540 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site LIT28_10540 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain LIT28_10540 IPR017121 Nitrite reductase [NAD(P)H], large subunit LIT28_10540 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB LIT28_10540 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily LIT28_10540 IPR023753 FAD/NAD(P)-binding domain LIT28_10540 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIT28_10545 IPR023551 Iron-sulfur cluster repair protein ScdA LIT28_10545 IPR012312 Haemerythrin-like LIT28_10545 IPR019903 Repair of iron centres family LIT28_10545 IPR038062 ScdA-like, N-terminal domain superfamily LIT28_10580 IPR036882 Alba-like domain superfamily LIT28_10580 IPR007347 Sporulation stage V, protein S LIT28_10600 IPR003607 HD/PDEase domain LIT28_10600 IPR006674 HD domain LIT28_10605 IPR003593 AAA+ ATPase domain LIT28_10605 IPR032524 ABC transporter Uup, C-terminal LIT28_10605 IPR032781 ABC-transporter extension domain LIT28_10605 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LIT28_10605 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_10605 IPR017871 ABC transporter, conserved site LIT28_10605 IPR003439 ABC transporter-like LIT28_10620 IPR012340 Nucleic acid-binding, OB-fold LIT28_10620 IPR011344 Single-stranded DNA-binding protein LIT28_10620 IPR000424 Primosome PriB/single-strand DNA-binding LIT28_10625 IPR011989 Armadillo-like helical LIT28_10625 IPR014824 Scaffold protein Nfu/NifU, N-terminal LIT28_10625 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily LIT28_10625 IPR004155 PBS lyase HEAT-like repeat LIT28_10625 IPR016024 Armadillo-type fold LIT28_10625 IPR025989 Virulence factor domain LIT28_10635 IPR009474 Putative bacilliredoxin, YphP/YqiW family LIT28_10635 IPR036249 Thioredoxin-like superfamily LIT28_10640 IPR007536 Ribosomal RNA small subunit methyltransferase J LIT28_10640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_10645 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily LIT28_10645 IPR035684 Arginyl-tRNA synthetase, catalytic core domain LIT28_10645 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIT28_10645 IPR008909 DALR anticodon binding LIT28_10645 IPR001278 Arginine-tRNA ligase LIT28_10645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_10645 IPR005148 Arginyl tRNA synthetase N-terminal domain LIT28_10670 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LIT28_10670 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_10670 IPR002300 Aminoacyl-tRNA synthetase, class Ia LIT28_10670 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LIT28_10670 IPR023586 Isoleucine-tRNA ligase, type 2 LIT28_10670 IPR002301 Isoleucine-tRNA ligase LIT28_10670 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain LIT28_10670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_10670 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIT28_10680 IPR001647 DNA-binding HTH domain, TetR-type LIT28_10680 IPR032551 HTH-type transcriptional repressor, C-terminal LIT28_10680 IPR009057 Homeobox-like domain superfamily LIT28_10680 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_10695 IPR035911 MurE/MurF, N-terminal LIT28_10695 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase LIT28_10695 IPR000713 Mur ligase, N-terminal catalytic domain LIT28_10695 IPR013221 Mur ligase, central LIT28_10695 IPR036615 Mur ligase, C-terminal domain superfamily LIT28_10695 IPR036565 Mur-like, catalytic domain superfamily LIT28_10695 IPR004101 Mur ligase, C-terminal LIT28_10700 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb LIT28_10700 IPR012340 Nucleic acid-binding, OB-fold LIT28_10700 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LIT28_10700 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_10700 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LIT28_10700 IPR004523 Aspartate-tRNA synthetase, type 2 LIT28_10720 IPR023839 Firmicutes EssC, C-terminal LIT28_10720 IPR003593 AAA+ ATPase domain LIT28_10720 IPR002543 FtsK domain LIT28_10720 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_10720 IPR022206 Firmicutes EssC, N-terminal LIT28_10790 IPR036129 Glycerate kinase superfamily LIT28_10790 IPR018197 Glycerate kinase, restriction-enzyme-like fold LIT28_10790 IPR018193 Glycerate kinase, flavodoxin-like fold LIT28_10790 IPR004381 Glycerate kinase LIT28_10795 IPR001898 Solute carrier family 13 LIT28_10795 IPR030676 Citrate carrier CitT-related LIT28_10800 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_10800 IPR001789 Signal transduction response regulator, receiver domain LIT28_10800 IPR011006 CheY-like superfamily LIT28_10800 IPR039420 Transcriptional regulatory protein WalR-like LIT28_10800 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_10805 IPR005467 Histidine kinase domain LIT28_10805 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_10805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_10805 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_10805 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_10805 IPR003660 HAMP domain LIT28_10805 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_10820 IPR000175 Sodium:neurotransmitter symporter LIT28_10820 IPR037272 Sodium:neurotransmitter symporter superfamily LIT28_10835 IPR021260 Lipid II flippase Amj LIT28_10840 IPR023214 HAD superfamily LIT28_10840 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_10840 IPR036412 HAD-like superfamily LIT28_10840 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_10845 IPR003474 Gluconate transporter LIT28_10850 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LIT28_10850 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LIT28_10850 IPR039697 Iron-type alcohol dehydrogenase-like LIT28_10855 IPR033134 Asp/Glu racemase, active site 2 LIT28_10855 IPR004380 Aspartate racemase LIT28_10855 IPR018187 Asp/Glu racemase, active site 1 LIT28_10855 IPR001920 Asp/Glu racemase LIT28_10855 IPR015942 Asp/Glu/hydantoin racemase LIT28_10860 IPR036414 YaeB, N-terminal domain superfamily LIT28_10860 IPR036413 YaeB-like superfamily LIT28_10860 IPR040372 YaeB-like LIT28_10860 IPR023368 Uncharacterised protein family UPF0066, conserved site LIT28_10860 IPR023370 TrmO-like, N-terminal domain LIT28_10865 IPR000182 GNAT domain LIT28_10865 IPR016181 Acyl-CoA N-acyltransferase LIT28_10870 IPR006543 Histidinol-phosphate phosphatase LIT28_10870 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase LIT28_10870 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LIT28_10870 IPR036412 HAD-like superfamily LIT28_10870 IPR013954 Polynucleotide kinase 3 phosphatase LIT28_10870 IPR023214 HAD superfamily LIT28_10880 IPR003439 ABC transporter-like LIT28_10880 IPR017871 ABC transporter, conserved site LIT28_10880 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_10880 IPR003593 AAA+ ATPase domain LIT28_10885 IPR010288 Bacterial ABC transporter EcsB LIT28_10890 IPR025616 YpjP-like protein LIT28_10895 IPR036412 HAD-like superfamily LIT28_10895 IPR006439 HAD hydrolase, subfamily IA LIT28_10895 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_10895 IPR023214 HAD superfamily LIT28_10895 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_10915 IPR027279 D-aminopeptidase/lipoprotein domain superfamily LIT28_10915 IPR012856 D-aminopeptidase, domain B LIT28_10915 IPR023645 D-aminopeptidase LIT28_10915 IPR012338 Beta-lactamase/transpeptidase-like LIT28_10915 IPR001466 Beta-lactamase-related LIT28_10920 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain LIT28_10920 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily LIT28_10920 IPR000398 Thymidylate synthase LIT28_10920 IPR020940 Thymidylate synthase, active site LIT28_10925 IPR012259 Dihydrofolate reductase LIT28_10925 IPR024072 Dihydrofolate reductase-like domain superfamily LIT28_10925 IPR017925 Dihydrofolate reductase conserved site LIT28_10925 IPR001796 Dihydrofolate reductase domain LIT28_10930 IPR001460 Penicillin-binding protein, transpeptidase LIT28_10930 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_10930 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_10930 IPR007887 NTF2-like N-terminal transpeptidase LIT28_10930 IPR032710 NTF2-like domain superfamily LIT28_10930 IPR012338 Beta-lactamase/transpeptidase-like LIT28_10935 IPR003680 Flavodoxin-like fold LIT28_10935 IPR029039 Flavoprotein-like superfamily LIT28_10935 IPR023048 NADH-azoreductase, FMN-dependent LIT28_10940 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase LIT28_10940 IPR002123 Phospholipid/glycerol acyltransferase LIT28_10945 IPR004254 AdipoR/Haemolysin-III-related LIT28_10945 IPR005744 Hly-III LIT28_10950 IPR003369 Sec-independent protein translocase protein TatA/B/E LIT28_10950 IPR006312 Sec-independent protein translocase protein TatA/E LIT28_10955 IPR019820 Sec-independent periplasmic protein translocase, conserved site LIT28_10955 IPR002033 Sec-independent periplasmic protein translocase TatC LIT28_10965 IPR003797 DegV LIT28_10970 IPR001279 Metallo-beta-lactamase LIT28_10970 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_10970 IPR022877 Protein of unknown funcion UPF0173 LIT28_10975 IPR003782 Copper chaperone SCO1/SenC LIT28_10975 IPR036249 Thioredoxin-like superfamily LIT28_10975 IPR013766 Thioredoxin domain LIT28_10980 IPR002068 Alpha crystallin/Hsp20 domain LIT28_10980 IPR031107 Small heat shock protein HSP20 LIT28_10980 IPR008978 HSP20-like chaperone LIT28_10985 IPR006426 Asparagine synthase, glutamine-hydrolyzing LIT28_10985 IPR001962 Asparagine synthase LIT28_10985 IPR033738 Asparagine synthase, N-terminal domain LIT28_10985 IPR017932 Glutamine amidotransferase type 2 domain LIT28_10985 IPR029055 Nucleophile aminohydrolases, N-terminal LIT28_11005 IPR002491 ABC transporter periplasmic binding domain LIT28_11010 IPR018300 Aminotransferase, class IV, conserved site LIT28_11010 IPR001544 Aminotransferase class IV LIT28_11010 IPR005784 D-amino acid aminotransferase LIT28_11010 IPR036038 Aminotransferase-like, PLP-dependent enzymes LIT28_11015 IPR029479 Nitroreductase LIT28_11015 IPR000415 Nitroreductase-like LIT28_11030 IPR000868 Isochorismatase-like LIT28_11030 IPR036380 Isochorismatase-like superfamily LIT28_11035 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_11035 IPR000086 NUDIX hydrolase domain LIT28_11040 IPR010920 LSM domain superfamily LIT28_11040 IPR006685 Mechanosensitive ion channel MscS LIT28_11040 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LIT28_11040 IPR023408 Mechanosensitive ion channel MscS domain superfamily LIT28_11045 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LIT28_11045 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_11045 IPR029016 GAF-like domain superfamily LIT28_11045 IPR003018 GAF domain LIT28_11045 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_11050 IPR011006 CheY-like superfamily LIT28_11050 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_11050 IPR001789 Signal transduction response regulator, receiver domain LIT28_11050 IPR000792 Transcription regulator LuxR, C-terminal LIT28_11055 IPR009057 Homeobox-like domain superfamily LIT28_11055 IPR000281 Helix-turn-helix protein RpiR LIT28_11055 IPR035472 RpiR-like, SIS domain LIT28_11055 IPR001347 Sugar isomerase (SIS) LIT28_11055 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_11060 IPR020843 Polyketide synthase, enoylreductase domain LIT28_11060 IPR011032 GroES-like superfamily LIT28_11060 IPR036291 NAD(P)-binding domain superfamily LIT28_11060 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_11060 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_11060 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LIT28_11075 IPR012338 Beta-lactamase/transpeptidase-like LIT28_11075 IPR001466 Beta-lactamase-related LIT28_11090 IPR006114 6-phosphogluconate dehydrogenase, C-terminal LIT28_11090 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LIT28_11090 IPR006184 6-phosphogluconate-binding site LIT28_11090 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type LIT28_11090 IPR036291 NAD(P)-binding domain superfamily LIT28_11090 IPR006183 6-phosphogluconate dehydrogenase LIT28_11090 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_11090 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_11110 IPR029039 Flavoprotein-like superfamily LIT28_11110 IPR005025 NADPH-dependent FMN reductase-like LIT28_11125 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_11125 IPR005892 Glycine betaine transport ATP-binding subunit LIT28_11125 IPR003593 AAA+ ATPase domain LIT28_11125 IPR017871 ABC transporter, conserved site LIT28_11125 IPR003439 ABC transporter-like LIT28_11125 IPR000644 CBS domain LIT28_11130 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_11130 IPR035906 MetI-like superfamily LIT28_11135 IPR002293 Amino acid/polyamine transporter I LIT28_11135 IPR004754 Amino acid antiporter LIT28_11135 IPR022461 Arginine/ornithine antiporter LIT28_11160 IPR023522 Chromosome-anchoring protein RacA LIT28_11165 IPR002550 CNNM, transmembrane domain LIT28_11165 IPR000644 CBS domain LIT28_11165 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_11165 IPR005170 Transporter-associated domain LIT28_11165 IPR016169 FAD-binding, type PCMH, subdomain 2 LIT28_11170 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_11170 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_11170 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIT28_11170 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_11170 IPR015590 Aldehyde dehydrogenase domain LIT28_11175 IPR012543 Protein of unknown function DUF1694 LIT28_11175 IPR029064 50S ribosomal protein L30e-like LIT28_11180 IPR018984 Histidine kinase, N-terminal LIT28_11180 IPR038284 Histidine kinase, N-terminal domain superfamily LIT28_11190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_11190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_11190 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_11190 IPR005814 Aminotransferase class-III LIT28_11195 IPR004163 Coenzyme A transferase binding site LIT28_11195 IPR012792 3-oxoacid CoA-transferase, subunit A LIT28_11195 IPR004165 Coenzyme A transferase family I LIT28_11195 IPR037171 NagB/RpiA transferase-like LIT28_11200 IPR004165 Coenzyme A transferase family I LIT28_11200 IPR012791 3-oxoacid CoA-transferase, subunit B LIT28_11200 IPR037171 NagB/RpiA transferase-like LIT28_11205 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_11205 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase LIT28_11205 IPR011650 Peptidase M20, dimerisation domain LIT28_11205 IPR002933 Peptidase M20 LIT28_11210 IPR016181 Acyl-CoA N-acyltransferase LIT28_11210 IPR022525 Beta-lysine N-acetyltransferase LIT28_11210 IPR000182 GNAT domain LIT28_11215 IPR035965 PAS domain superfamily LIT28_11215 IPR000014 PAS domain LIT28_11215 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_11215 IPR002078 RNA polymerase sigma factor 54 interaction domain LIT28_11215 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LIT28_11215 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LIT28_11215 IPR025944 Sigma-54 interaction domain, conserved site LIT28_11215 IPR002197 DNA binding HTH domain, Fis-type LIT28_11215 IPR009057 Homeobox-like domain superfamily LIT28_11215 IPR003593 AAA+ ATPase domain LIT28_11220 IPR013785 Aldolase-type TIM barrel LIT28_11220 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase LIT28_11220 IPR025895 Lysine-2,3-aminomutase, C-terminal domain LIT28_11220 IPR022459 Lysine-2,3-aminomutase LIT28_11225 IPR022451 Conserved hypothetical protein CHP03829, YokU LIT28_11225 IPR022453 Zinc finger, MqsA-type LIT28_11230 IPR023089 YozE SAM-like domain LIT28_11230 IPR010673 Protein of unknown function UPF0346 LIT28_11230 IPR036806 YozE SAM-like superfamily LIT28_11245 IPR025545 YozD-like protein LIT28_11255 IPR011009 Protein kinase-like domain superfamily LIT28_11255 IPR000719 Protein kinase domain LIT28_11255 IPR017441 Protein kinase, ATP binding site LIT28_11255 IPR008271 Serine/threonine-protein kinase, active site LIT28_11255 IPR003646 SH3-like domain, bacterial-type LIT28_11260 IPR014752 Arrestin, C-terminal LIT28_11260 IPR014756 Immunoglobulin E-set LIT28_11260 IPR009776 Sporulation stage 0, protein M LIT28_11265 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LIT28_11265 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LIT28_11270 IPR002524 Cation efflux protein LIT28_11270 IPR027470 Cation efflux protein, cytoplasmic domain LIT28_11270 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LIT28_11270 IPR027469 Cation efflux transmembrane domain superfamily LIT28_11280 IPR005746 Thioredoxin LIT28_11280 IPR036249 Thioredoxin-like superfamily LIT28_11280 IPR013766 Thioredoxin domain LIT28_11285 IPR010998 Integrase/recombinase, N-terminal LIT28_11285 IPR002104 Integrase, catalytic domain LIT28_11285 IPR004107 Integrase, SAM-like, N-terminal LIT28_11285 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_11285 IPR013762 Integrase-like, catalytic domain superfamily LIT28_11295 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_11295 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_11340 IPR011604 Exonuclease, phage-type/RecB, C-terminal LIT28_11340 IPR017482 Putative phage-type endonuclease LIT28_11340 IPR011335 Restriction endonuclease type II-like LIT28_11340 IPR019080 YqaJ viral recombinase LIT28_11345 IPR018330 RecT family LIT28_11345 IPR004590 DNA single-strand annealing protein RecT LIT28_11365 IPR027393 Virus scaffolding protein, C-terminal LIT28_11365 IPR038091 UPF0302, N-terminal domain superfamily LIT28_11365 IPR011188 Uncharacterised protein family UPF0302 LIT28_11365 IPR014957 IDEAL domain LIT28_11365 IPR014963 Uncharacterised domain UPF0302, N-terminal LIT28_11405 IPR016181 Acyl-CoA N-acyltransferase LIT28_11405 IPR000182 GNAT domain LIT28_11440 IPR018925 Phage terminase small subunit LIT28_11440 IPR038713 Terminase small subunit, N-terminal domain superfamily LIT28_11440 IPR005335 Terminase small subunit LIT28_11445 IPR035412 Phage terminase large subunit, N-terminal LIT28_11445 IPR006437 Bacteriophage terminase, large subunit LIT28_11445 IPR035413 Phage terminase large subunit, C-terminal LIT28_11595 IPR006829 LXG domain LIT28_11595 IPR027797 Pre-toxin TG domain LIT28_11595 IPR026835 UPF0720 protein yqcG LIT28_11615 IPR011335 Restriction endonuclease type II-like LIT28_11615 IPR007560 Restriction endonuclease type IV, Mrr LIT28_11700 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_11700 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_11700 IPR007627 RNA polymerase sigma-70 region 2 LIT28_11700 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LIT28_11700 IPR014296 RNA polymerase sigma-M, bacillaceae LIT28_11700 IPR014284 RNA polymerase sigma-70 like domain LIT28_11700 IPR039425 RNA polymerase sigma-70 like LIT28_11700 IPR013325 RNA polymerase sigma factor, region 2 LIT28_11700 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_11730 IPR023059 Foldase protein PrsA LIT28_11730 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LIT28_11730 IPR027304 Trigger factor/SurA domain superfamily LIT28_11750 IPR019618 Spore germination protein GerPA/GerPF LIT28_11760 IPR036291 NAD(P)-binding domain superfamily LIT28_11760 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_11760 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_11780 IPR036116 Fibronectin type III superfamily LIT28_11780 IPR012338 Beta-lactamase/transpeptidase-like LIT28_11780 IPR003961 Fibronectin type III LIT28_11780 IPR001460 Penicillin-binding protein, transpeptidase LIT28_11780 IPR036950 Penicillin binding protein transglycosylase domain LIT28_11780 IPR023346 Lysozyme-like domain superfamily LIT28_11780 IPR013783 Immunoglobulin-like fold LIT28_11780 IPR001264 Glycosyl transferase, family 51 LIT28_11790 IPR020846 Major facilitator superfamily domain LIT28_11790 IPR036259 MFS transporter superfamily LIT28_11790 IPR011701 Major facilitator superfamily LIT28_11795 IPR008326 Uncharacterised conserved protein UCP034852 LIT28_11795 IPR000361 FeS cluster biogenesis LIT28_11795 IPR035903 HesB-like domain superfamily LIT28_11800 IPR019810 Citrate synthase active site LIT28_11800 IPR002020 Citrate synthase LIT28_11800 IPR016143 Citrate synthase-like, small alpha subdomain LIT28_11800 IPR024176 Citrate synthase, bacterial-type LIT28_11800 IPR016142 Citrate synthase-like, large alpha subdomain LIT28_11800 IPR036969 Citrate synthase superfamily LIT28_11805 IPR036148 MmgE/PrpD superfamily LIT28_11805 IPR042183 MmgE/PrpD superfamily, domain 1 LIT28_11805 IPR042188 MmgE/PrpD superfamily, domain 2 LIT28_11805 IPR005656 MmgE/PrpD LIT28_11805 IPR012705 2-methylcitrate dehydratase PrpD LIT28_11810 IPR040442 Pyruvate kinase-like domain superfamily LIT28_11810 IPR039556 ICL/PEPM domain LIT28_11810 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site LIT28_11810 IPR012695 2-methylisocitrate lyase LIT28_11810 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIT28_11815 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIT28_11815 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIT28_11815 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIT28_11815 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIT28_11815 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIT28_11815 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIT28_11815 IPR006089 Acyl-CoA dehydrogenase, conserved site LIT28_11820 IPR036291 NAD(P)-binding domain superfamily LIT28_11820 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain LIT28_11820 IPR006398 2-hydroxy-3-oxopropionate reductase LIT28_11820 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site LIT28_11820 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_11820 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LIT28_11820 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_11820 IPR015815 3-hydroxyisobutyrate dehydrogenase-related LIT28_11825 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_11825 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_11825 IPR010061 Methylmalonate-semialdehyde dehydrogenase LIT28_11825 IPR015590 Aldehyde dehydrogenase domain LIT28_11825 IPR016160 Aldehyde dehydrogenase, cysteine active site LIT28_11825 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria LIT28_11825 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_11830 IPR004778 Homoserine/Threonine efflux protein LIT28_11830 IPR001123 Amino acid exporter protein, LeuE-type LIT28_11835 IPR029045 ClpP/crotonase-like domain superfamily LIT28_11835 IPR001753 Enoyl-CoA hydratase/isomerase LIT28_11835 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LIT28_11835 IPR014748 Enoyl-CoA hydratase, C-terminal LIT28_11845 IPR019699 Protein of unknown function DUF2584 LIT28_11845 IPR015947 PUA-like superfamily LIT28_11850 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain LIT28_11850 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_11850 IPR029052 Metallo-dependent phosphatase-like LIT28_11850 IPR004593 Nuclease SbcCD subunit D LIT28_11850 IPR026843 Nuclease SbcCD subunit D, C-terminal domain LIT28_11855 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_11855 IPR038729 Rad50/SbcC-type AAA domain LIT28_11865 IPR001584 Integrase, catalytic core LIT28_11865 IPR025948 HTH-like domain LIT28_11865 IPR012337 Ribonuclease H-like superfamily LIT28_11865 IPR036397 Ribonuclease H superfamily LIT28_11865 IPR038965 Transposase InsF-like LIT28_11880 IPR011991 ArsR-like helix-turn-helix domain LIT28_11880 IPR036390 Winged helix DNA-binding domain superfamily LIT28_11880 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_11880 IPR001845 HTH ArsR-type DNA-binding domain LIT28_11890 IPR036259 MFS transporter superfamily LIT28_11890 IPR011701 Major facilitator superfamily LIT28_11890 IPR004741 Oxalate/formate antiporter family transporter LIT28_11890 IPR020846 Major facilitator superfamily domain LIT28_11895 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase LIT28_11895 IPR036291 NAD(P)-binding domain superfamily LIT28_11895 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_11895 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_11900 IPR015890 Chorismate-utilising enzyme, C-terminal LIT28_11900 IPR005801 ADC synthase LIT28_11900 IPR004561 Isochorismate synthase LIT28_11905 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_11905 IPR020845 AMP-binding, conserved site LIT28_11905 IPR000873 AMP-dependent synthetase/ligase LIT28_11905 IPR011963 2,3-dihydroxybenzoate-AMP ligase LIT28_11910 IPR009081 Phosphopantetheine binding ACP domain LIT28_11910 IPR036380 Isochorismatase-like superfamily LIT28_11910 IPR000868 Isochorismatase-like LIT28_11910 IPR016291 Isochorismatase LIT28_11910 IPR036736 ACP-like superfamily LIT28_11915 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LIT28_11915 IPR029058 Alpha/Beta hydrolase fold LIT28_11915 IPR042099 AMP-dependent synthetase-like superfamily LIT28_11915 IPR000873 AMP-dependent synthetase/ligase LIT28_11915 IPR020845 AMP-binding, conserved site LIT28_11915 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_11915 IPR036736 ACP-like superfamily LIT28_11915 IPR010071 Amino acid adenylation domain LIT28_11915 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_11915 IPR001242 Condensation domain LIT28_11915 IPR001031 Thioesterase LIT28_11915 IPR009081 Phosphopantetheine binding ACP domain LIT28_11915 IPR020802 Polyketide synthase, thioesterase domain LIT28_11920 IPR005153 MbtH-like domain LIT28_11920 IPR038020 MbtH-like domain superfamily LIT28_11920 IPR037407 MbtH-like protein LIT28_11925 IPR004638 Drug resistance transporter EmrB-like LIT28_11925 IPR011701 Major facilitator superfamily LIT28_11925 IPR020846 Major facilitator superfamily domain LIT28_11925 IPR036259 MFS transporter superfamily LIT28_11940 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LIT28_11940 IPR000119 Histone-like DNA-binding protein LIT28_11940 IPR020816 Histone-like DNA-binding protein, conserved site LIT28_11950 IPR007837 DNA damage-inducible protein DinB LIT28_11950 IPR034660 DinB/YfiT-like putative metalloenzymes LIT28_11955 IPR034084 Thermitase-like, domain LIT28_11955 IPR015500 Peptidase S8, subtilisin-related LIT28_11955 IPR023828 Peptidase S8, subtilisin, Ser-active site LIT28_11955 IPR023827 Peptidase S8, subtilisin, Asp-active site LIT28_11955 IPR036852 Peptidase S8/S53 domain superfamily LIT28_11955 IPR000209 Peptidase S8/S53 domain LIT28_11955 IPR022398 Peptidase S8, subtilisin, His-active site LIT28_11960 IPR001463 Sodium:alanine symporter LIT28_11980 IPR011008 Dimeric alpha-beta barrel LIT28_11980 IPR032555 Domain of unknown function DUF4937 LIT28_11985 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LIT28_11985 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_11985 IPR006145 Pseudouridine synthase, RsuA/RluA LIT28_11985 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LIT28_11985 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LIT28_11985 IPR002942 RNA-binding S4 domain LIT28_11985 IPR036986 RNA-binding S4 domain superfamily LIT28_11990 IPR012675 Beta-grasp domain superfamily LIT28_11990 IPR012676 TGS-like LIT28_11990 IPR002320 Threonine-tRNA ligase, class IIa LIT28_11990 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIT28_11990 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_11990 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LIT28_11990 IPR033728 Threonine-tRNA ligase catalytic core domain LIT28_11990 IPR004095 TGS LIT28_11990 IPR036621 Anticodon-binding domain superfamily LIT28_11990 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LIT28_11990 IPR004154 Anticodon-binding LIT28_11995 IPR021354 Protein of unknown function DUF2975 LIT28_12000 IPR003439 ABC transporter-like LIT28_12000 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_12000 IPR003593 AAA+ ATPase domain LIT28_12010 IPR029058 Alpha/Beta hydrolase fold LIT28_12010 IPR022742 Serine aminopeptidase, S33 LIT28_12010 IPR002410 Peptidase S33 LIT28_12015 IPR020846 Major facilitator superfamily domain LIT28_12015 IPR011701 Major facilitator superfamily LIT28_12015 IPR036259 MFS transporter superfamily LIT28_12015 IPR004751 Drug antiporter protein LIT28_12050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_12050 IPR041698 Methyltransferase domain 25 LIT28_12090 IPR018490 Cyclic nucleotide-binding-like LIT28_12090 IPR012318 Crp-type HTH domain LIT28_12090 IPR000595 Cyclic nucleotide-binding domain LIT28_12110 IPR000731 Sterol-sensing domain LIT28_12110 IPR004869 Membrane transport protein MMPL domain LIT28_12120 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_12120 IPR001707 Chloramphenicol acetyltransferase LIT28_12120 IPR018372 Chloramphenicol acetyltransferase, active site LIT28_12130 IPR016181 Acyl-CoA N-acyltransferase LIT28_12130 IPR000182 GNAT domain LIT28_12155 IPR029058 Alpha/Beta hydrolase fold LIT28_12160 IPR002937 Amine oxidase LIT28_12160 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_12160 IPR004572 Protoporphyrinogen oxidase LIT28_12170 IPR016181 Acyl-CoA N-acyltransferase LIT28_12170 IPR000182 GNAT domain LIT28_12180 IPR011129 Cold shock domain LIT28_12180 IPR012156 Cold shock, CspA LIT28_12180 IPR019844 Cold-shock (CSD) domain LIT28_12180 IPR012340 Nucleic acid-binding, OB-fold LIT28_12180 IPR002059 Cold-shock protein, DNA-binding LIT28_12200 IPR023214 HAD superfamily LIT28_12200 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_12200 IPR000150 Cof family LIT28_12200 IPR036412 HAD-like superfamily LIT28_12210 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12210 IPR036390 Winged helix DNA-binding domain superfamily LIT28_12210 IPR023187 Transcriptional regulator MarR-type, conserved site LIT28_12210 IPR000835 MarR-type HTH domain LIT28_12215 IPR011701 Major facilitator superfamily LIT28_12215 IPR020846 Major facilitator superfamily domain LIT28_12215 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIT28_12215 IPR005829 Sugar transporter, conserved site LIT28_12215 IPR036259 MFS transporter superfamily LIT28_12255 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12255 IPR036390 Winged helix DNA-binding domain superfamily LIT28_12255 IPR000847 Transcription regulator HTH, LysR LIT28_12255 IPR005119 LysR, substrate-binding LIT28_12260 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site LIT28_12260 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type LIT28_12260 IPR000534 Semialdehyde dehydrogenase, NAD-binding LIT28_12260 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LIT28_12260 IPR012080 Aspartate-semialdehyde dehydrogenase LIT28_12260 IPR036291 NAD(P)-binding domain superfamily LIT28_12275 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain LIT28_12275 IPR005119 LysR, substrate-binding LIT28_12275 IPR000847 Transcription regulator HTH, LysR LIT28_12275 IPR036390 Winged helix DNA-binding domain superfamily LIT28_12275 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12280 IPR005163 3-alpha domain LIT28_12280 IPR005302 Molybdenum cofactor sulfurase, C-terminal LIT28_12280 IPR011037 Pyruvate kinase-like, insert domain superfamily LIT28_12295 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_12295 IPR017871 ABC transporter, conserved site LIT28_12295 IPR039421 Type I protein exporter LIT28_12295 IPR003439 ABC transporter-like LIT28_12295 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_12295 IPR011527 ABC transporter type 1, transmembrane domain LIT28_12295 IPR003593 AAA+ ATPase domain LIT28_12300 IPR003593 AAA+ ATPase domain LIT28_12300 IPR011527 ABC transporter type 1, transmembrane domain LIT28_12300 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_12300 IPR003439 ABC transporter-like LIT28_12300 IPR017871 ABC transporter, conserved site LIT28_12300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_12300 IPR039421 Type I protein exporter LIT28_12330 IPR001123 Amino acid exporter protein, LeuE-type LIT28_12335 IPR014710 RmlC-like jelly roll fold LIT28_12335 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_12335 IPR011051 RmlC-like cupin domain superfamily LIT28_12335 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_12335 IPR013096 Cupin 2, conserved barrel LIT28_12365 IPR009057 Homeobox-like domain superfamily LIT28_12365 IPR001647 DNA-binding HTH domain, TetR-type LIT28_12370 IPR011701 Major facilitator superfamily LIT28_12370 IPR020846 Major facilitator superfamily domain LIT28_12370 IPR036259 MFS transporter superfamily LIT28_12375 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_12375 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_12375 IPR036291 NAD(P)-binding domain superfamily LIT28_12400 IPR032710 NTF2-like domain superfamily LIT28_12400 IPR014284 RNA polymerase sigma-70 like domain LIT28_12400 IPR007627 RNA polymerase sigma-70 region 2 LIT28_12400 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_12400 IPR013325 RNA polymerase sigma factor, region 2 LIT28_12400 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_12400 IPR037401 SnoaL-like domain LIT28_12400 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12425 IPR013785 Aldolase-type TIM barrel LIT28_12425 IPR017853 Glycoside hydrolase superfamily LIT28_12425 IPR003790 Glycosyl hydrolase-like 10 LIT28_12425 IPR013783 Immunoglobulin-like fold LIT28_12435 IPR004501 Phosphotransferase system, EIIC component, type 3 LIT28_12435 IPR003352 Phosphotransferase system, EIIC LIT28_12435 IPR004796 Phosphotransferase system, cellobiose-type IIC component LIT28_12445 IPR005338 Anhydro-N-acetylmuramic acid kinase LIT28_12450 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type LIT28_12455 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY LIT28_12460 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase LIT28_12460 IPR000192 Aminotransferase class V domain LIT28_12460 IPR012703 2-aminoethylphosphonate--pyruvate transaminase LIT28_12460 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_12460 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_12460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_12465 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LIT28_12465 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_12465 IPR005789 Threonine dehydratase, catabolic LIT28_12465 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_12480 IPR017782 Hydroxyacylglutathione hydrolase LIT28_12480 IPR001279 Metallo-beta-lactamase LIT28_12480 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain LIT28_12480 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain LIT28_12480 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_12495 IPR011545 DEAD/DEAH box helicase domain LIT28_12495 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_12495 IPR014014 RNA helicase, DEAD-box type, Q motif LIT28_12495 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_12495 IPR001650 Helicase, C-terminal LIT28_12530 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LIT28_12530 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LIT28_12530 IPR033879 Undecaprenyl-diphosphatase LIT28_12535 IPR014710 RmlC-like jelly roll fold LIT28_12535 IPR015985 Tellurite resistance methyltransferase TehB-like domain LIT28_12535 IPR004537 Tellurite resistance methyltransferase, TehB LIT28_12535 IPR014431 Tellurite resistance methyltransferase, TehB type-2 LIT28_12535 IPR015392 Domain of unknown function DUF1971 LIT28_12535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_12545 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LIT28_12545 IPR000399 TPP-binding enzyme, conserved site LIT28_12545 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme LIT28_12545 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIT28_12545 IPR012000 Thiamine pyrophosphate enzyme, central domain LIT28_12545 IPR029061 Thiamin diphosphate-binding fold LIT28_12545 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae LIT28_12545 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LIT28_12550 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12550 IPR000835 MarR-type HTH domain LIT28_12550 IPR036390 Winged helix DNA-binding domain superfamily LIT28_12555 IPR005952 Phosphoglycerate mutase 1 LIT28_12555 IPR013078 Histidine phosphatase superfamily, clade-1 LIT28_12555 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site LIT28_12555 IPR029033 Histidine phosphatase superfamily LIT28_12560 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system LIT28_12590 IPR001160 Peptidase M20C, Xaa-His dipeptidase LIT28_12590 IPR002933 Peptidase M20 LIT28_12590 IPR011650 Peptidase M20, dimerisation domain LIT28_12600 IPR011004 Trimeric LpxA-like superfamily LIT28_12600 IPR018357 Hexapeptide transferase, conserved site LIT28_12600 IPR001451 Hexapeptide repeat LIT28_12605 IPR012338 Beta-lactamase/transpeptidase-like LIT28_12605 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LIT28_12605 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIT28_12605 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIT28_12605 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LIT28_12605 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIT28_12620 IPR012338 Beta-lactamase/transpeptidase-like LIT28_12620 IPR032710 NTF2-like domain superfamily LIT28_12620 IPR001460 Penicillin-binding protein, transpeptidase LIT28_12620 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_12620 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_12620 IPR007887 NTF2-like N-terminal transpeptidase LIT28_12625 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12625 IPR014286 RNA polymerase sigma-70 RpoE type LIT28_12625 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_12625 IPR013325 RNA polymerase sigma factor, region 2 LIT28_12625 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_12625 IPR039425 RNA polymerase sigma-70 like LIT28_12625 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LIT28_12625 IPR014284 RNA polymerase sigma-70 like domain LIT28_12625 IPR007627 RNA polymerase sigma-70 region 2 LIT28_12635 IPR012338 Beta-lactamase/transpeptidase-like LIT28_12635 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_12635 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_12635 IPR001460 Penicillin-binding protein, transpeptidase LIT28_12640 IPR001460 Penicillin-binding protein, transpeptidase LIT28_12640 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_12640 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_12640 IPR012338 Beta-lactamase/transpeptidase-like LIT28_12645 IPR000871 Beta-lactamase, class-A LIT28_12645 IPR012338 Beta-lactamase/transpeptidase-like LIT28_12645 IPR023650 Beta-lactamase, class-A active site LIT28_12660 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_12660 IPR017871 ABC transporter, conserved site LIT28_12660 IPR003439 ABC transporter-like LIT28_12660 IPR003593 AAA+ ATPase domain LIT28_12670 IPR009057 Homeobox-like domain superfamily LIT28_12670 IPR001647 DNA-binding HTH domain, TetR-type LIT28_12670 IPR013570 Transcription regulator YsiA, C-terminal LIT28_12670 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_12685 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIT28_12685 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIT28_12685 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIT28_12685 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIT28_12685 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIT28_12685 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIT28_12685 IPR006089 Acyl-CoA dehydrogenase, conserved site LIT28_12690 IPR011764 Biotin carboxylation domain LIT28_12690 IPR005481 Biotin carboxylase-like, N-terminal domain LIT28_12690 IPR011761 ATP-grasp fold LIT28_12690 IPR013815 ATP-grasp fold, subdomain 1 LIT28_12690 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LIT28_12690 IPR016185 Pre-ATP-grasp domain superfamily LIT28_12690 IPR011054 Rudiment single hybrid motif LIT28_12690 IPR005482 Biotin carboxylase, C-terminal LIT28_12695 IPR000089 Biotin/lipoyl attachment LIT28_12695 IPR011053 Single hybrid motif LIT28_12700 IPR013785 Aldolase-type TIM barrel LIT28_12700 IPR000891 Pyruvate carboxyltransferase LIT28_12705 IPR029045 ClpP/crotonase-like domain superfamily LIT28_12705 IPR001753 Enoyl-CoA hydratase/isomerase LIT28_12705 IPR014748 Enoyl-CoA hydratase, C-terminal LIT28_12705 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LIT28_12710 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal LIT28_12710 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal LIT28_12710 IPR029045 ClpP/crotonase-like domain superfamily LIT28_12710 IPR034733 Acetyl-CoA carboxylase LIT28_12715 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain LIT28_12715 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_12715 IPR020845 AMP-binding, conserved site LIT28_12715 IPR000873 AMP-dependent synthetase/ligase LIT28_12715 IPR042099 AMP-dependent synthetase-like superfamily LIT28_12715 IPR011904 Acetate-CoA ligase LIT28_12730 IPR016181 Acyl-CoA N-acyltransferase LIT28_12730 IPR000182 GNAT domain LIT28_12735 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_12735 IPR006083 Phosphoribulokinase/uridine kinase LIT28_12735 IPR026008 Uridine kinase LIT28_12735 IPR000764 Uridine kinase-like LIT28_12745 IPR007837 DNA damage-inducible protein DinB LIT28_12745 IPR034660 DinB/YfiT-like putative metalloenzymes LIT28_12750 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LIT28_12750 IPR012338 Beta-lactamase/transpeptidase-like LIT28_12750 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIT28_12750 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LIT28_12750 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIT28_12750 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIT28_12755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_12755 IPR005467 Histidine kinase domain LIT28_12755 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_12755 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_12755 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_12755 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_12760 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12760 IPR039420 Transcriptional regulatory protein WalR-like LIT28_12760 IPR001789 Signal transduction response regulator, receiver domain LIT28_12760 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_12760 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_12760 IPR011006 CheY-like superfamily LIT28_12765 IPR003607 HD/PDEase domain LIT28_12765 IPR006674 HD domain LIT28_12775 IPR000845 Nucleoside phosphorylase domain LIT28_12775 IPR010049 MTA/SAH nucleosidase LIT28_12775 IPR035994 Nucleoside phosphorylase superfamily LIT28_12795 IPR025711 PepSY domain LIT28_12795 IPR023612 Peptidase M4 LIT28_12795 IPR027268 Peptidase M4/M1, CTD superfamily LIT28_12795 IPR001570 Peptidase M4, C-terminal LIT28_12795 IPR013856 Peptidase M4 domain LIT28_12795 IPR011096 FTP domain LIT28_12815 IPR004602 UvrABC system subunit A LIT28_12815 IPR041102 UvrA, interaction domain LIT28_12815 IPR003439 ABC transporter-like LIT28_12815 IPR017871 ABC transporter, conserved site LIT28_12815 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_12815 IPR041552 UvrA DNA-binding domain LIT28_12830 IPR001586 Beta-lactamase, class-C active site LIT28_12830 IPR001466 Beta-lactamase-related LIT28_12830 IPR012338 Beta-lactamase/transpeptidase-like LIT28_12835 IPR011789 Cu(I)-responsive transcriptional regulator LIT28_12835 IPR009061 Putative DNA-binding domain superfamily LIT28_12835 IPR000551 MerR-type HTH domain LIT28_12835 IPR015358 Transcription regulator MerR, DNA binding LIT28_12840 IPR011701 Major facilitator superfamily LIT28_12840 IPR020846 Major facilitator superfamily domain LIT28_12840 IPR036259 MFS transporter superfamily LIT28_12845 IPR036412 HAD-like superfamily LIT28_12845 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LIT28_12845 IPR023214 HAD superfamily LIT28_12845 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase LIT28_12845 IPR006543 Histidinol-phosphate phosphatase LIT28_12860 IPR026669 Arsenite methyltransferase-like LIT28_12860 IPR025714 Methyltransferase domain LIT28_12860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_12870 IPR037479 Tautomerase, MSAD family LIT28_12870 IPR014347 Tautomerase/MIF superfamily LIT28_12875 IPR036390 Winged helix DNA-binding domain superfamily LIT28_12875 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12875 IPR000847 Transcription regulator HTH, LysR LIT28_12875 IPR005119 LysR, substrate-binding LIT28_12890 IPR018062 HTH domain AraC-type, conserved site LIT28_12890 IPR018060 DNA binding HTH domain, AraC-type LIT28_12890 IPR009057 Homeobox-like domain superfamily LIT28_12900 IPR004839 Aminotransferase, class I/classII LIT28_12900 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_12900 IPR000524 Transcription regulator HTH, GntR LIT28_12900 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12900 IPR036390 Winged helix DNA-binding domain superfamily LIT28_12900 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_12935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_12935 IPR013216 Methyltransferase type 11 LIT28_12940 IPR000713 Mur ligase, N-terminal catalytic domain LIT28_12940 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase LIT28_12940 IPR035911 MurE/MurF, N-terminal LIT28_12940 IPR013221 Mur ligase, central LIT28_12940 IPR036565 Mur-like, catalytic domain superfamily LIT28_12940 IPR004101 Mur ligase, C-terminal LIT28_12940 IPR036615 Mur ligase, C-terminal domain superfamily LIT28_12945 IPR002818 DJ-1/PfpI LIT28_12945 IPR029062 Class I glutamine amidotransferase-like LIT28_12960 IPR042047 Cell wall hydrolase SleB, domain 1 LIT28_12960 IPR011105 Cell wall hydrolase, SleB LIT28_12970 IPR011006 CheY-like superfamily LIT28_12970 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_12970 IPR001789 Signal transduction response regulator, receiver domain LIT28_12970 IPR039420 Transcriptional regulatory protein WalR-like LIT28_12970 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_12970 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_12975 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_12975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_12975 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_12975 IPR005467 Histidine kinase domain LIT28_12975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_12990 IPR023210 NADP-dependent oxidoreductase domain LIT28_12990 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_12995 IPR003593 AAA+ ATPase domain LIT28_12995 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_12995 IPR032781 ABC-transporter extension domain LIT28_12995 IPR003439 ABC transporter-like LIT28_13010 IPR003593 AAA+ ATPase domain LIT28_13010 IPR003439 ABC transporter-like LIT28_13010 IPR017871 ABC transporter, conserved site LIT28_13010 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_13015 IPR027022 ABC transporter permease protein, BceB-type LIT28_13015 IPR003838 ABC transporter permease protein domain LIT28_13030 IPR029058 Alpha/Beta hydrolase fold LIT28_13035 IPR036291 NAD(P)-binding domain superfamily LIT28_13035 IPR002912 ACT domain LIT28_13035 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding LIT28_13035 IPR001342 Homoserine dehydrogenase, catalytic LIT28_13035 IPR016204 Homoserine dehydrogenase LIT28_13035 IPR019811 Homoserine dehydrogenase, conserved site LIT28_13040 IPR000524 Transcription regulator HTH, GntR LIT28_13040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_13040 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_13040 IPR036390 Winged helix DNA-binding domain superfamily LIT28_13040 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_13040 IPR004839 Aminotransferase, class I/classII LIT28_13045 IPR011761 ATP-grasp fold LIT28_13045 IPR005905 D-alanine--D-alanine ligase LIT28_13045 IPR013815 ATP-grasp fold, subdomain 1 LIT28_13045 IPR011095 D-alanine--D-alanine ligase, C-terminal LIT28_13045 IPR011127 D-alanine--D-alanine ligase, N-terminal domain LIT28_13045 IPR016185 Pre-ATP-grasp domain superfamily LIT28_13045 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site LIT28_13050 IPR016084 Haem oxygenase-like, multi-helical LIT28_13050 IPR004305 Thiaminase-2/PQQC LIT28_13050 IPR027574 Thiaminase II LIT28_13120 IPR013762 Integrase-like, catalytic domain superfamily LIT28_13120 IPR002104 Integrase, catalytic domain LIT28_13120 IPR010998 Integrase/recombinase, N-terminal LIT28_13120 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_13120 IPR004107 Integrase, SAM-like, N-terminal LIT28_13160 IPR002611 IstB-like ATP-binding protein LIT28_13160 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_13160 IPR003593 AAA+ ATPase domain LIT28_13160 IPR009928 Primosomal DnaI, N-terminal LIT28_13215 IPR013762 Integrase-like, catalytic domain superfamily LIT28_13215 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_13215 IPR002104 Integrase, catalytic domain LIT28_13220 IPR013096 Cupin 2, conserved barrel LIT28_13220 IPR014710 RmlC-like jelly roll fold LIT28_13220 IPR011051 RmlC-like cupin domain superfamily LIT28_13350 IPR002502 N-acetylmuramoyl-L-alanine amidase domain LIT28_13350 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily LIT28_13350 IPR038200 GW domain superfamily LIT28_13350 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain LIT28_13350 IPR025987 GW domain LIT28_13420 IPR002397 Cytochrome P450, B-class LIT28_13420 IPR017972 Cytochrome P450, conserved site LIT28_13420 IPR036396 Cytochrome P450 superfamily LIT28_13420 IPR001128 Cytochrome P450 LIT28_13430 IPR018357 Hexapeptide transferase, conserved site LIT28_13430 IPR011004 Trimeric LpxA-like superfamily LIT28_13430 IPR001451 Hexapeptide repeat LIT28_13435 IPR011437 Domain of unknown function DUF1540 LIT28_13445 IPR001128 Cytochrome P450 LIT28_13445 IPR002397 Cytochrome P450, B-class LIT28_13445 IPR036396 Cytochrome P450 superfamily LIT28_13445 IPR017972 Cytochrome P450, conserved site LIT28_13455 IPR023214 HAD superfamily LIT28_13455 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_13455 IPR036412 HAD-like superfamily LIT28_13455 IPR000150 Cof family LIT28_13460 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_13460 IPR005467 Histidine kinase domain LIT28_13460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_13460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_13460 IPR000014 PAS domain LIT28_13460 IPR035965 PAS domain superfamily LIT28_13460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_13460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_13460 IPR013767 PAS fold LIT28_13465 IPR001460 Penicillin-binding protein, transpeptidase LIT28_13465 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_13465 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_13465 IPR012338 Beta-lactamase/transpeptidase-like LIT28_13470 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase LIT28_13470 IPR006326 UDP-glycosyltransferase, MGT LIT28_13475 IPR018187 Asp/Glu racemase, active site 1 LIT28_13475 IPR033134 Asp/Glu racemase, active site 2 LIT28_13475 IPR004380 Aspartate racemase LIT28_13475 IPR001920 Asp/Glu racemase LIT28_13475 IPR015942 Asp/Glu/hydantoin racemase LIT28_13480 IPR022914 Protein of unknown function UPF0397 LIT28_13480 IPR009825 ECF transporter, substrate-specific component-like LIT28_13500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_13500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_13500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_13500 IPR005467 Histidine kinase domain LIT28_13500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_13500 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_13510 IPR007344 GrpB/Dephospho-CoA kinase LIT28_13515 IPR020843 Polyketide synthase, enoylreductase domain LIT28_13515 IPR036291 NAD(P)-binding domain superfamily LIT28_13515 IPR011032 GroES-like superfamily LIT28_13515 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_13515 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_13520 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LIT28_13520 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LIT28_13520 IPR033879 Undecaprenyl-diphosphatase LIT28_13525 IPR005543 PASTA domain LIT28_13525 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_13525 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_13525 IPR001460 Penicillin-binding protein, transpeptidase LIT28_13525 IPR012338 Beta-lactamase/transpeptidase-like LIT28_13535 IPR021860 Peptidase S12, Pab87-related, C-terminal LIT28_13535 IPR012338 Beta-lactamase/transpeptidase-like LIT28_13535 IPR001466 Beta-lactamase-related LIT28_13575 IPR014509 Uncharacterised conserved protein UCP020606 LIT28_13580 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LIT28_13580 IPR033879 Undecaprenyl-diphosphatase LIT28_13580 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LIT28_13585 IPR012610 Small acid-soluble spore protein, SspH LIT28_13590 IPR007353 Protein of unknown function DUF421 LIT28_13590 IPR023090 UPF0702, alpha/beta domain superfamily LIT28_13615 IPR036259 MFS transporter superfamily LIT28_13615 IPR020846 Major facilitator superfamily domain LIT28_13615 IPR011701 Major facilitator superfamily LIT28_13635 IPR004839 Aminotransferase, class I/classII LIT28_13635 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_13635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_13635 IPR000524 Transcription regulator HTH, GntR LIT28_13635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_13635 IPR036390 Winged helix DNA-binding domain superfamily LIT28_13635 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_13640 IPR000620 EamA domain LIT28_13650 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_13650 IPR036412 HAD-like superfamily LIT28_13650 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_13650 IPR000086 NUDIX hydrolase domain LIT28_13650 IPR020084 NUDIX hydrolase, conserved site LIT28_13650 IPR020476 NUDIX hydrolase LIT28_13650 IPR023214 HAD superfamily LIT28_13660 IPR001466 Beta-lactamase-related LIT28_13660 IPR012338 Beta-lactamase/transpeptidase-like LIT28_13670 IPR004741 Oxalate/formate antiporter family transporter LIT28_13670 IPR036259 MFS transporter superfamily LIT28_13670 IPR020846 Major facilitator superfamily domain LIT28_13670 IPR011701 Major facilitator superfamily LIT28_13685 IPR022925 NADH pyrophosphatase NudC LIT28_13685 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_13685 IPR000086 NUDIX hydrolase domain LIT28_13685 IPR020084 NUDIX hydrolase, conserved site LIT28_13685 IPR015376 Zinc ribbon, NADH pyrophosphatase LIT28_13690 IPR022637 DNA polymerase III, beta sliding clamp, central LIT28_13690 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal LIT28_13690 IPR001001 DNA polymerase III, beta sliding clamp LIT28_13690 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal LIT28_13705 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_13705 IPR001279 Metallo-beta-lactamase LIT28_13725 IPR035948 YwqG-like superfamily LIT28_13725 IPR015315 Protein of unknown function DUF1963 LIT28_13745 IPR002641 Patatin-like phospholipase domain LIT28_13745 IPR037483 YjjU-like LIT28_13745 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LIT28_13750 IPR037063 Bacterial Pleckstrin homology domain superfamily LIT28_13750 IPR012544 Bacterial Pleckstrin homology domain LIT28_13760 IPR024775 DinB-like domain LIT28_13760 IPR023774 Putative metal-dependent hydrolase YfiT LIT28_13760 IPR034660 DinB/YfiT-like putative metalloenzymes LIT28_13775 IPR003824 Undecaprenyl-diphosphatase UppP LIT28_13785 IPR014527 Excinuclease GIY-YIG catalytic domain-containing uncharacterised conserved protein LIT28_13785 IPR035901 GIY-YIG endonuclease superfamily LIT28_13785 IPR000305 GIY-YIG endonuclease LIT28_13825 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_13825 IPR006076 FAD dependent oxidoreductase LIT28_13850 IPR006439 HAD hydrolase, subfamily IA LIT28_13850 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB LIT28_13850 IPR036412 HAD-like superfamily LIT28_13850 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_13850 IPR023214 HAD superfamily LIT28_13850 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_13855 IPR011006 CheY-like superfamily LIT28_13855 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_13855 IPR001789 Signal transduction response regulator, receiver domain LIT28_13855 IPR039420 Transcriptional regulatory protein WalR-like LIT28_13855 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_13860 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_13860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_13860 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_13860 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_13860 IPR000014 PAS domain LIT28_13860 IPR035965 PAS domain superfamily LIT28_13860 IPR013767 PAS fold LIT28_13860 IPR031967 PhoR, single Cache-like domain LIT28_13860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_13860 IPR005467 Histidine kinase domain LIT28_13870 IPR036397 Ribonuclease H superfamily LIT28_13870 IPR001584 Integrase, catalytic core LIT28_13870 IPR025948 HTH-like domain LIT28_13870 IPR038965 Transposase InsF-like LIT28_13870 IPR012337 Ribonuclease H-like superfamily LIT28_13885 IPR003593 AAA+ ATPase domain LIT28_13885 IPR003439 ABC transporter-like LIT28_13885 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_13890 IPR003838 ABC transporter permease protein domain LIT28_13890 IPR025857 MacB-like periplasmic core domain LIT28_13900 IPR033140 Lipase, GDXG, putative serine active site LIT28_13900 IPR013094 Alpha/beta hydrolase fold-3 LIT28_13900 IPR029058 Alpha/Beta hydrolase fold LIT28_13900 IPR002168 Lipase, GDXG, putative histidine active site LIT28_13905 IPR010977 Aromatic-L-amino-acid decarboxylase LIT28_13905 IPR002129 Pyridoxal phosphate-dependent decarboxylase LIT28_13905 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_13905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_13905 IPR021115 Pyridoxal-phosphate binding site LIT28_13910 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LIT28_13910 IPR006162 Phosphopantetheine attachment site LIT28_13910 IPR009081 Phosphopantetheine binding ACP domain LIT28_13910 IPR010060 Non-ribosomal peptide synthase LIT28_13910 IPR001242 Condensation domain LIT28_13910 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_13910 IPR000873 AMP-dependent synthetase/ligase LIT28_13910 IPR020845 AMP-binding, conserved site LIT28_13910 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_13910 IPR036736 ACP-like superfamily LIT28_13910 IPR010071 Amino acid adenylation domain LIT28_13910 IPR042099 AMP-dependent synthetase-like superfamily LIT28_13920 IPR013783 Immunoglobulin-like fold LIT28_13920 IPR011840 Pullulanase, type I LIT28_13920 IPR014756 Immunoglobulin E-set LIT28_13920 IPR013780 Glycosyl hydrolase, all-beta LIT28_13920 IPR017853 Glycoside hydrolase superfamily LIT28_13920 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LIT28_13920 IPR005323 Pullulanase, carbohydrate-binding module 41 LIT28_13920 IPR013784 Carbohydrate-binding-like fold LIT28_13920 IPR004193 Glycoside hydrolase, family 13, N-terminal LIT28_13925 IPR001570 Peptidase M4, C-terminal LIT28_13925 IPR025711 PepSY domain LIT28_13925 IPR023612 Peptidase M4 LIT28_13925 IPR027268 Peptidase M4/M1, CTD superfamily LIT28_13925 IPR011096 FTP domain LIT28_13925 IPR013856 Peptidase M4 domain LIT28_13930 IPR029052 Metallo-dependent phosphatase-like LIT28_13930 IPR019931 LPXTG cell wall anchor domain LIT28_13930 IPR041827 CpdB, N-terminal metallophosphatase domain LIT28_13930 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_13930 IPR006179 5'-Nucleotidase/apyrase LIT28_13930 IPR006146 5'-Nucleotidase, conserved site LIT28_13930 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LIT28_13930 IPR008334 5'-Nucleotidase, C-terminal LIT28_13940 IPR023201 SecY domain superfamily LIT28_13940 IPR026593 Protein translocase subunit SecY LIT28_13940 IPR002208 SecY/SEC61-alpha family LIT28_13940 IPR030659 SecY conserved site LIT28_13945 IPR038454 DnaA, N-terminal domain superfamily LIT28_13945 IPR018312 Chromosomal replication control, initiator DnaA, conserved site LIT28_13945 IPR020591 Chromosomal replication control, initiator DnaA-like LIT28_13945 IPR001957 Chromosomal replication control, initiator DnaA LIT28_13945 IPR013317 Chromosomal replication initiator protein DnaA LIT28_13945 IPR024633 DnaA N-terminal domain LIT28_13945 IPR010921 Trp repressor/replication initiator LIT28_13945 IPR003593 AAA+ ATPase domain LIT28_13945 IPR013159 Chromosomal replication initiator, DnaA C-terminal LIT28_13945 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_13950 IPR000620 EamA domain LIT28_13950 IPR004779 Carboxylate/Amino Acid/Amine Transporter LIT28_13955 IPR004839 Aminotransferase, class I/classII LIT28_13955 IPR036390 Winged helix DNA-binding domain superfamily LIT28_13955 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_13955 IPR000524 Transcription regulator HTH, GntR LIT28_13955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_13955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_13955 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_13960 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_13960 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_13960 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 LIT28_13960 IPR011032 GroES-like superfamily LIT28_13960 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site LIT28_13960 IPR020843 Polyketide synthase, enoylreductase domain LIT28_13960 IPR036291 NAD(P)-binding domain superfamily LIT28_13965 IPR029058 Alpha/Beta hydrolase fold LIT28_13965 IPR000073 Alpha/beta hydrolase fold-1 LIT28_13995 IPR016181 Acyl-CoA N-acyltransferase LIT28_13995 IPR000182 GNAT domain LIT28_14005 IPR014247 Sporulation lipoprotein YhcN/YlaJ LIT28_14005 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like LIT28_14010 IPR025711 PepSY domain LIT28_14010 IPR014239 Spore germination YpeB LIT28_14015 IPR011105 Cell wall hydrolase, SleB LIT28_14015 IPR014224 Spore cortex-lytic enzyme SleB LIT28_14015 IPR042047 Cell wall hydrolase SleB, domain 1 LIT28_14015 IPR036366 PGBD superfamily LIT28_14015 IPR036365 PGBD-like superfamily LIT28_14015 IPR002477 Peptidoglycan binding-like LIT28_14030 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like LIT28_14030 IPR004981 Tryptophan 2,3-dioxygenase LIT28_14030 IPR017485 Tryptophan 2,3-dioxygenase, bacterial LIT28_14035 IPR037175 Kynurenine formamidase superfamily LIT28_14035 IPR007325 Kynurenine formamidase/cyclase-like LIT28_14035 IPR017484 Kynurenine formamidase, bacteria LIT28_14040 IPR000192 Aminotransferase class V domain LIT28_14040 IPR010111 Kynureninase LIT28_14040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_14040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_14040 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_14045 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_14045 IPR013570 Transcription regulator YsiA, C-terminal LIT28_14045 IPR009057 Homeobox-like domain superfamily LIT28_14045 IPR001647 DNA-binding HTH domain, TetR-type LIT28_14050 IPR000086 NUDIX hydrolase domain LIT28_14050 IPR020084 NUDIX hydrolase, conserved site LIT28_14050 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_14050 IPR020476 NUDIX hydrolase LIT28_14050 IPR023214 HAD superfamily LIT28_14050 IPR036412 HAD-like superfamily LIT28_14050 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_14075 IPR029016 GAF-like domain superfamily LIT28_14075 IPR009057 Homeobox-like domain superfamily LIT28_14075 IPR002197 DNA binding HTH domain, Fis-type LIT28_14075 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_14075 IPR002078 RNA polymerase sigma factor 54 interaction domain LIT28_14075 IPR025944 Sigma-54 interaction domain, conserved site LIT28_14075 IPR003593 AAA+ ATPase domain LIT28_14075 IPR003018 GAF domain LIT28_14085 IPR016181 Acyl-CoA N-acyltransferase LIT28_14085 IPR000182 GNAT domain LIT28_14090 IPR001034 DeoR-type HTH domain LIT28_14090 IPR037171 NagB/RpiA transferase-like LIT28_14090 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LIT28_14090 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_14090 IPR036390 Winged helix DNA-binding domain superfamily LIT28_14090 IPR014036 DeoR C-terminal sensor domain LIT28_14105 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LIT28_14105 IPR021179 Mercury(II) reductase LIT28_14105 IPR036163 Heavy metal-associated domain superfamily LIT28_14105 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT28_14105 IPR006121 Heavy metal-associated domain, HMA LIT28_14105 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIT28_14105 IPR023753 FAD/NAD(P)-binding domain LIT28_14105 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_14105 IPR017969 Heavy-metal-associated, conserved site LIT28_14105 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LIT28_14110 IPR030489 Transcription regulator Rrf2-type, conserved site LIT28_14110 IPR036390 Winged helix DNA-binding domain superfamily LIT28_14110 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_14110 IPR000944 Transcription regulator Rrf2-type LIT28_14125 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LIT28_14125 IPR023753 FAD/NAD(P)-binding domain LIT28_14125 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LIT28_14125 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT28_14125 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_14125 IPR006258 Dihydrolipoamide dehydrogenase LIT28_14125 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIT28_14130 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LIT28_14130 IPR000089 Biotin/lipoyl attachment LIT28_14130 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_14130 IPR036625 E3-binding domain superfamily LIT28_14130 IPR004167 Peripheral subunit-binding domain LIT28_14130 IPR011053 Single hybrid motif LIT28_14135 IPR033248 Transketolase, C-terminal domain LIT28_14135 IPR005475 Transketolase-like, pyrimidine-binding domain LIT28_14135 IPR029061 Thiamin diphosphate-binding fold LIT28_14135 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LIT28_14140 IPR001017 Dehydrogenase, E1 component LIT28_14140 IPR029061 Thiamin diphosphate-binding fold LIT28_14150 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_14150 IPR036291 NAD(P)-binding domain superfamily LIT28_14150 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_14155 IPR000182 GNAT domain LIT28_14155 IPR007344 GrpB/Dephospho-CoA kinase LIT28_14155 IPR016181 Acyl-CoA N-acyltransferase LIT28_14165 IPR020476 NUDIX hydrolase LIT28_14165 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_14165 IPR020084 NUDIX hydrolase, conserved site LIT28_14165 IPR000086 NUDIX hydrolase domain LIT28_14165 IPR022927 RNA pyrophosphohydrolase RppH LIT28_14190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_14190 IPR035906 MetI-like superfamily LIT28_14195 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_14195 IPR005892 Glycine betaine transport ATP-binding subunit LIT28_14195 IPR000644 CBS domain LIT28_14195 IPR003439 ABC transporter-like LIT28_14195 IPR003593 AAA+ ATPase domain LIT28_14195 IPR017871 ABC transporter, conserved site LIT28_14200 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain LIT28_14205 IPR033135 ClpP, histidine active site LIT28_14205 IPR001907 ATP-dependent Clp protease proteolytic subunit LIT28_14205 IPR029045 ClpP/crotonase-like domain superfamily LIT28_14205 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LIT28_14220 IPR004788 Ribose 5-phosphate isomerase, type A LIT28_14220 IPR037171 NagB/RpiA transferase-like LIT28_14220 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup LIT28_14225 IPR016181 Acyl-CoA N-acyltransferase LIT28_14225 IPR000182 GNAT domain LIT28_14225 IPR039143 Glucosamine 6-phosphate N-acetyltransferase LIT28_14230 IPR004302 Cellulose/chitin-binding protein, N-terminal LIT28_14230 IPR041029 N-acetylglucosamine binding protein A domain 2 LIT28_14230 IPR020879 N-acetylglucosamine-binding protein A LIT28_14230 IPR014756 Immunoglobulin E-set LIT28_14245 IPR021257 Protein of unknown function DUF2809 LIT28_14250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_14250 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LIT28_14250 IPR013216 Methyltransferase type 11 LIT28_14265 IPR035681 ComA-like, MBL domain LIT28_14265 IPR004477 ComEC/Rec2-related protein LIT28_14265 IPR004797 Competence protein ComEC/Rec2 LIT28_14265 IPR025405 Domain of unknown function DUF4131 LIT28_14265 IPR001279 Metallo-beta-lactamase LIT28_14265 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_14300 IPR000182 GNAT domain LIT28_14300 IPR016181 Acyl-CoA N-acyltransferase LIT28_14320 IPR014016 UvrD-like helicase, ATP-binding domain LIT28_14320 IPR027785 UvrD-like helicase C-terminal domain LIT28_14320 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_14320 IPR000212 DNA helicase, UvrD/REP type LIT28_14330 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like LIT28_14330 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily LIT28_14330 IPR013024 Gamma-glutamyl cyclotransferase-like LIT28_14330 IPR039126 Gamma-glutamylaminecyclotransferase LIT28_14335 IPR004589 DNA helicase, ATP-dependent, RecQ type LIT28_14335 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial LIT28_14335 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_14335 IPR001650 Helicase, C-terminal LIT28_14335 IPR010997 HRDC-like superfamily LIT28_14335 IPR002121 HRDC domain LIT28_14335 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_14335 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LIT28_14335 IPR018982 RQC domain LIT28_14335 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_14335 IPR036390 Winged helix DNA-binding domain superfamily LIT28_14335 IPR011545 DEAD/DEAH box helicase domain LIT28_14380 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable LIT28_14380 IPR038222 DHHA2 domain superfamily LIT28_14380 IPR004097 DHHA2 domain LIT28_14380 IPR038763 DHH phosphoesterase superfamily LIT28_14380 IPR001667 DDH domain LIT28_14385 IPR004302 Cellulose/chitin-binding protein, N-terminal LIT28_14385 IPR041029 N-acetylglucosamine binding protein A domain 2 LIT28_14385 IPR020879 N-acetylglucosamine-binding protein A LIT28_14385 IPR014756 Immunoglobulin E-set LIT28_14400 IPR029032 AhpD-like LIT28_14400 IPR003779 Carboxymuconolactone decarboxylase-like LIT28_14405 IPR001463 Sodium:alanine symporter LIT28_14410 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIT28_14410 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_14410 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_14410 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_14410 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent LIT28_14410 IPR015590 Aldehyde dehydrogenase domain LIT28_14415 IPR013785 Aldolase-type TIM barrel LIT28_14415 IPR020624 Schiff base-forming aldolase, conserved site LIT28_14415 IPR020625 Schiff base-forming aldolase, active site LIT28_14415 IPR002220 DapA-like LIT28_14415 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA LIT28_14420 IPR008794 Proline racemase family LIT28_14425 IPR008794 Proline racemase family LIT28_14430 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_14430 IPR006076 FAD dependent oxidoreductase LIT28_14430 IPR012727 Glycine oxidase ThiO LIT28_14435 IPR003593 AAA+ ATPase domain LIT28_14435 IPR009057 Homeobox-like domain superfamily LIT28_14435 IPR025944 Sigma-54 interaction domain, conserved site LIT28_14435 IPR002197 DNA binding HTH domain, Fis-type LIT28_14435 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_14435 IPR000014 PAS domain LIT28_14435 IPR028082 Periplasmic binding protein-like I LIT28_14435 IPR002078 RNA polymerase sigma factor 54 interaction domain LIT28_14435 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LIT28_14435 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LIT28_14440 IPR023753 FAD/NAD(P)-binding domain LIT28_14440 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B LIT28_14440 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_14440 IPR007419 BFD-like [2Fe-2S]-binding domain LIT28_14440 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LIT28_14450 IPR007419 BFD-like [2Fe-2S]-binding domain LIT28_14450 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B LIT28_14450 IPR023753 FAD/NAD(P)-binding domain LIT28_14450 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_14450 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LIT28_14465 IPR014975 Protein of unknown function DUF1836 LIT28_14470 IPR032816 SNARE associated Golgi protein LIT28_14485 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes LIT28_14485 IPR006998 DltD LIT28_14505 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_14505 IPR000914 Solute-binding protein family 5 domain LIT28_14505 IPR023765 Solute-binding protein family 5, conserved site LIT28_14505 IPR039424 Solute-binding protein family 5 LIT28_14510 IPR041382 Bacterial dipeptidyl-peptidase SH3 domain LIT28_14510 IPR000064 Endopeptidase, NLPC/P60 domain LIT28_14510 IPR038765 Papain-like cysteine peptidase superfamily LIT28_14515 IPR036849 Enolase-like, C-terminal domain superfamily LIT28_14515 IPR034603 Dipeptide epimerase LIT28_14515 IPR029017 Enolase-like, N-terminal LIT28_14515 IPR029065 Enolase C-terminal domain-like LIT28_14515 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LIT28_14515 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LIT28_14530 IPR016193 Cytidine deaminase-like LIT28_14530 IPR002125 Cytidine and deoxycytidylate deaminase domain LIT28_14530 IPR016192 APOBEC/CMP deaminase, zinc-binding LIT28_14555 IPR008979 Galactose-binding-like domain superfamily LIT28_14555 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase LIT28_14555 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain LIT28_14555 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal LIT28_14555 IPR029058 Alpha/Beta hydrolase fold LIT28_14555 IPR005674 CocE/Serine esterase LIT28_14560 IPR013767 PAS fold LIT28_14560 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_14560 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_14560 IPR005467 Histidine kinase domain LIT28_14560 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_14560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_14560 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_14560 IPR000014 PAS domain LIT28_14560 IPR035965 PAS domain superfamily LIT28_14560 IPR031967 PhoR, single Cache-like domain LIT28_14565 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_14565 IPR039420 Transcriptional regulatory protein WalR-like LIT28_14565 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_14565 IPR001789 Signal transduction response regulator, receiver domain LIT28_14565 IPR011006 CheY-like superfamily LIT28_14565 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_14590 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_14590 IPR036412 HAD-like superfamily LIT28_14590 IPR023214 HAD superfamily LIT28_14590 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_14590 IPR006439 HAD hydrolase, subfamily IA LIT28_14595 IPR010049 MTA/SAH nucleosidase LIT28_14595 IPR035994 Nucleoside phosphorylase superfamily LIT28_14595 IPR000845 Nucleoside phosphorylase domain LIT28_14600 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase LIT28_14600 IPR004629 Glycosyl transferase WecB/TagA/CpsF LIT28_14605 IPR013647 Oligopeptidase F, N-terminal domain LIT28_14605 IPR042088 Oligoendopeptidase F, C-terminal domain LIT28_14605 IPR001567 Peptidase M3A/M3B catalytic domain LIT28_14605 IPR004438 Peptidase M3B, oligoendopeptidase F LIT28_14615 IPR003797 DegV LIT28_14630 IPR039286 Exosporium protein C LIT28_14655 IPR004638 Drug resistance transporter EmrB-like LIT28_14655 IPR011701 Major facilitator superfamily LIT28_14655 IPR020846 Major facilitator superfamily domain LIT28_14655 IPR036259 MFS transporter superfamily LIT28_14665 IPR007607 Bactofilin A/B LIT28_14670 IPR025063 Protein of unknown function DUF4004 LIT28_14675 IPR039424 Solute-binding protein family 5 LIT28_14675 IPR000914 Solute-binding protein family 5 domain LIT28_14675 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain LIT28_14680 IPR011701 Major facilitator superfamily LIT28_14680 IPR020846 Major facilitator superfamily domain LIT28_14680 IPR036259 MFS transporter superfamily LIT28_14705 IPR007341 Transglycosylase-associated protein LIT28_14710 IPR022976 Non-specific ribonucleoside hydrolase RihC LIT28_14710 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LIT28_14710 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LIT28_14710 IPR036452 Ribonucleoside hydrolase-like LIT28_14720 IPR013216 Methyltransferase type 11 LIT28_14720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_14750 IPR004839 Aminotransferase, class I/classII LIT28_14750 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type LIT28_14750 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 LIT28_14750 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LIT28_14750 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_14750 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_14750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_14755 IPR029069 HotDog domain superfamily LIT28_14755 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ LIT28_14760 IPR004567 Type II pantothenate kinase LIT28_14760 IPR011602 Type II pantothenate kinase, bacterial LIT28_14780 IPR003593 AAA+ ATPase domain LIT28_14780 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_14780 IPR003439 ABC transporter-like LIT28_14785 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LIT28_14785 IPR011663 UbiC transcription regulator-associated LIT28_14785 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_14785 IPR036390 Winged helix DNA-binding domain superfamily LIT28_14785 IPR000524 Transcription regulator HTH, GntR LIT28_14830 IPR002549 Transmembrane protein TqsA-like LIT28_14845 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent LIT28_14845 IPR011251 Luciferase-like domain LIT28_14845 IPR036661 Luciferase-like domain superfamily LIT28_14850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_14850 IPR035906 MetI-like superfamily LIT28_14855 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LIT28_14855 IPR010067 Aliphatic sulfonates-binding protein LIT28_14855 IPR015168 SsuA/THI5-like LIT28_14860 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_14860 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB LIT28_14860 IPR003593 AAA+ ATPase domain LIT28_14860 IPR003439 ABC transporter-like LIT28_14860 IPR017871 ABC transporter, conserved site LIT28_14895 IPR028345 Aminoglycoside 3-N-acetyltransferase-like LIT28_14895 IPR003679 Aminoglycoside N(3)-acetyltransferase LIT28_14920 IPR032713 Putative multidrug resistance efflux transporter LIT28_14925 IPR024775 DinB-like domain LIT28_14925 IPR034660 DinB/YfiT-like putative metalloenzymes LIT28_14950 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_14950 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_14950 IPR005856 Cysteine synthase LIT28_14950 IPR005859 Cysteine synthase CysK LIT28_14950 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site LIT28_14955 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_14955 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_14955 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_14965 IPR002509 NodB homology domain LIT28_14965 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_14970 IPR022301 Integral membrane protein YjbE LIT28_14970 IPR005496 Integral membrane protein TerC LIT28_14975 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIT28_14975 IPR012160 Lipoteichoic acid synthase-like LIT28_14975 IPR000917 Sulfatase, N-terminal LIT28_14980 IPR003439 ABC transporter-like LIT28_14980 IPR003593 AAA+ ATPase domain LIT28_14980 IPR032781 ABC-transporter extension domain LIT28_14980 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_14990 IPR004869 Membrane transport protein MMPL domain LIT28_14990 IPR000731 Sterol-sensing domain LIT28_14995 IPR001647 DNA-binding HTH domain, TetR-type LIT28_14995 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_14995 IPR032551 HTH-type transcriptional repressor, C-terminal LIT28_14995 IPR009057 Homeobox-like domain superfamily LIT28_15005 IPR001986 Enolpyruvate transferase domain LIT28_15005 IPR036968 Enolpyruvate transferase domain superfamily LIT28_15005 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase LIT28_15005 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site LIT28_15005 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta LIT28_15010 IPR002912 ACT domain LIT28_15010 IPR003099 Prephenate dehydrogenase LIT28_15010 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_15010 IPR036291 NAD(P)-binding domain superfamily LIT28_15015 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LIT28_15015 IPR004839 Aminotransferase, class I/classII LIT28_15015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_15015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_15015 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_15015 IPR005861 Histidinol-phosphate aminotransferase family LIT28_15020 IPR020541 Chorismate synthase, conserved site LIT28_15020 IPR035904 Chorismate synthase AroC superfamily LIT28_15020 IPR000453 Chorismate synthase LIT28_15025 IPR010954 Chorismate mutase, Firmicutes/Deinococcus LIT28_15025 IPR002701 Chorismate mutase II, prokaryotic-type LIT28_15025 IPR006218 DAHP synthetase I/KDSA LIT28_15025 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 LIT28_15025 IPR013785 Aldolase-type TIM barrel LIT28_15025 IPR036979 Chorismate mutase domain superfamily LIT28_15040 IPR000868 Isochorismatase-like LIT28_15040 IPR036380 Isochorismatase-like superfamily LIT28_15045 IPR016181 Acyl-CoA N-acyltransferase LIT28_15045 IPR002575 Aminoglycoside phosphotransferase LIT28_15045 IPR000182 GNAT domain LIT28_15045 IPR011009 Protein kinase-like domain superfamily LIT28_15055 IPR010611 3D domain LIT28_15055 IPR036779 LysM domain superfamily LIT28_15055 IPR018392 LysM domain LIT28_15055 IPR036908 RlpA-like domain superfamily LIT28_15070 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_15070 IPR006231 Malate:quinone-oxidoreductase LIT28_15075 IPR028082 Periplasmic binding protein-like I LIT28_15075 IPR025997 Periplasmic binding protein LIT28_15075 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB LIT28_15080 IPR001851 ABC transporter, permease LIT28_15085 IPR001851 ABC transporter, permease LIT28_15090 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_15090 IPR003593 AAA+ ATPase domain LIT28_15090 IPR017871 ABC transporter, conserved site LIT28_15090 IPR003439 ABC transporter-like LIT28_15090 IPR030281 Autoinducer 2 import ATP-binding protein LsrA LIT28_15095 IPR012318 Crp-type HTH domain LIT28_15095 IPR037171 NagB/RpiA transferase-like LIT28_15095 IPR007324 Sugar-binding domain, putative LIT28_15095 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_15100 IPR033676 Autoinducer-2 kinase LIT28_15100 IPR000577 Carbohydrate kinase, FGGY LIT28_15100 IPR018485 Carbohydrate kinase, FGGY, C-terminal LIT28_15100 IPR018484 Carbohydrate kinase, FGGY, N-terminal LIT28_15110 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase LIT28_15110 IPR013785 Aldolase-type TIM barrel LIT28_15110 IPR002915 DeoC/FbaB/ lacD aldolase LIT28_15110 IPR041720 Aldolase FbaB-like, archaeal-type LIT28_15135 IPR007138 Antibiotic biosynthesis monooxygenase domain LIT28_15135 IPR011008 Dimeric alpha-beta barrel LIT28_15155 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LIT28_15155 IPR011657 Concentrative nucleoside transporter C-terminal domain LIT28_15155 IPR002668 Concentrative nucleoside transporter N-terminal domain LIT28_15155 IPR008276 Concentrative nucleoside transporter LIT28_15160 IPR012134 Glutamate-5-semialdehyde dehydrogenase LIT28_15160 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site LIT28_15160 IPR000965 GPR domain LIT28_15160 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_15160 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_15160 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_15160 IPR015590 Aldehyde dehydrogenase domain LIT28_15165 IPR036393 Acetylglutamate kinase-like superfamily LIT28_15165 IPR001048 Aspartate/glutamate/uridylate kinase LIT28_15165 IPR041739 Glutamate-5-kinase domain LIT28_15165 IPR001057 Glutamate/acetylglutamate kinase LIT28_15165 IPR011529 Glutamate 5-kinase LIT28_15165 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase LIT28_15165 IPR019797 Glutamate 5-kinase, conserved site LIT28_15165 IPR002478 PUA domain LIT28_15165 IPR015947 PUA-like superfamily LIT28_15165 IPR036974 PUA domain superfamily LIT28_15170 IPR000304 Pyrroline-5-carboxylate reductase LIT28_15170 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain LIT28_15170 IPR036291 NAD(P)-binding domain superfamily LIT28_15170 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_15170 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LIT28_15175 IPR002933 Peptidase M20 LIT28_15175 IPR012166 Uncharacterised protein family RocB LIT28_15180 IPR005471 Transcription regulator IclR, N-terminal LIT28_15180 IPR036390 Winged helix DNA-binding domain superfamily LIT28_15180 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_15180 IPR014757 Transcription regulator IclR, C-terminal LIT28_15180 IPR029016 GAF-like domain superfamily LIT28_15185 IPR004841 Amino acid permease/ SLC12A domain LIT28_15185 IPR004840 Amino acid permease, conserved site LIT28_15195 IPR005804 Fatty acid desaturase domain LIT28_15200 IPR012300 Peptidase M6, InhA LIT28_15200 IPR008757 Peptidase M6-like, domain LIT28_15205 IPR001952 Alkaline phosphatase LIT28_15205 IPR018299 Alkaline phosphatase, active site LIT28_15205 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIT28_15210 IPR021354 Protein of unknown function DUF2975 LIT28_15215 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_15215 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_15230 IPR011397 Intramembrane metalloprotease YhfC LIT28_15240 IPR011006 CheY-like superfamily LIT28_15240 IPR007492 LytTR DNA-binding domain LIT28_15240 IPR001789 Signal transduction response regulator, receiver domain LIT28_15255 IPR016181 Acyl-CoA N-acyltransferase LIT28_15255 IPR000182 GNAT domain LIT28_15260 IPR025870 Glyoxalase-like domain LIT28_15260 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_15260 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_15280 IPR011703 ATPase, AAA-3 LIT28_15280 IPR041628 ChlI/MoxR, AAA lid domain LIT28_15280 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_15295 IPR011701 Major facilitator superfamily LIT28_15295 IPR020846 Major facilitator superfamily domain LIT28_15295 IPR005829 Sugar transporter, conserved site LIT28_15295 IPR036259 MFS transporter superfamily LIT28_15305 IPR001173 Glycosyltransferase 2-like LIT28_15305 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_15305 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase LIT28_15315 IPR001173 Glycosyltransferase 2-like LIT28_15315 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_15320 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase LIT28_15320 IPR001173 Glycosyltransferase 2-like LIT28_15320 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_15330 IPR026330 Succinylornithine transaminase LIT28_15330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_15330 IPR005814 Aminotransferase class-III LIT28_15330 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_15330 IPR004636 Acetylornithine/Succinylornithine transaminase family LIT28_15330 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria LIT28_15330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_15335 IPR020835 Catalase superfamily LIT28_15335 IPR010582 Catalase immune-responsive domain LIT28_15335 IPR002226 Catalase haem-binding site LIT28_15335 IPR011614 Catalase core domain LIT28_15335 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 LIT28_15335 IPR037060 Catalase core domain superfamily LIT28_15335 IPR018028 Catalase, mono-functional, haem-containing LIT28_15335 IPR024708 Catalase active site LIT28_15335 IPR040333 Catalase, clade 3 LIT28_15345 IPR026912 Adenine deaminase C-terminal domain LIT28_15345 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_15345 IPR032466 Metal-dependent hydrolase LIT28_15345 IPR006680 Amidohydrolase-related LIT28_15350 IPR001466 Beta-lactamase-related LIT28_15350 IPR012338 Beta-lactamase/transpeptidase-like LIT28_15375 IPR029479 Nitroreductase LIT28_15375 IPR000415 Nitroreductase-like LIT28_15380 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_15380 IPR011991 ArsR-like helix-turn-helix domain LIT28_15380 IPR001845 HTH ArsR-type DNA-binding domain LIT28_15380 IPR000835 MarR-type HTH domain LIT28_15380 IPR036390 Winged helix DNA-binding domain superfamily LIT28_15385 IPR031157 Tr-type G domain, conserved site LIT28_15385 IPR005517 Translation elongation factor EFG/EF2, domain IV LIT28_15385 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_15385 IPR000795 Transcription factor, GTP-binding domain LIT28_15385 IPR035650 Tetracycline resistance protein, C-terminal LIT28_15385 IPR005225 Small GTP-binding protein domain LIT28_15385 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_15385 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_15385 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_15385 IPR000640 Elongation factor EFG, domain V-like LIT28_15385 IPR035647 EF-G domain III/V-like LIT28_15385 IPR041095 Elongation Factor G, domain II LIT28_15390 IPR011051 RmlC-like cupin domain superfamily LIT28_15390 IPR013096 Cupin 2, conserved barrel LIT28_15390 IPR014710 RmlC-like jelly roll fold LIT28_15400 IPR011234 Fumarylacetoacetase-like, C-terminal LIT28_15400 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily LIT28_15410 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase LIT28_15410 IPR002938 FAD-binding domain LIT28_15410 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_15415 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family LIT28_15415 IPR006683 Thioesterase domain LIT28_15415 IPR029069 HotDog domain superfamily LIT28_15415 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site LIT28_15420 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_15420 IPR020845 AMP-binding, conserved site LIT28_15420 IPR000873 AMP-dependent synthetase/ligase LIT28_15425 IPR020616 Thiolase, N-terminal LIT28_15425 IPR020613 Thiolase, conserved site LIT28_15425 IPR020617 Thiolase, C-terminal LIT28_15425 IPR020615 Thiolase, acyl-enzyme intermediate active site LIT28_15425 IPR016039 Thiolase-like LIT28_15425 IPR002155 Thiolase LIT28_15425 IPR020610 Thiolase, active site LIT28_15430 IPR029045 ClpP/crotonase-like domain superfamily LIT28_15430 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LIT28_15430 IPR001753 Enoyl-CoA hydratase/isomerase LIT28_15430 IPR014748 Enoyl-CoA hydratase, C-terminal LIT28_15435 IPR036291 NAD(P)-binding domain superfamily LIT28_15435 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_15435 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_15435 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LIT28_15435 IPR022694 3-hydroxyacyl-CoA dehydrogenase LIT28_15435 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site LIT28_15435 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LIT28_15440 IPR001360 Glycoside hydrolase family 1 LIT28_15440 IPR018120 Glycoside hydrolase family 1, active site LIT28_15440 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LIT28_15440 IPR017853 Glycoside hydrolase superfamily LIT28_15445 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit LIT28_15445 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily LIT28_15450 IPR003352 Phosphotransferase system, EIIC LIT28_15450 IPR004501 Phosphotransferase system, EIIC component, type 3 LIT28_15450 IPR004796 Phosphotransferase system, cellobiose-type IIC component LIT28_15460 IPR036095 PTS system IIB component-like superfamily LIT28_15460 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LIT28_15460 IPR013012 Phosphotransferase system, EIIB component, type 3 LIT28_15470 IPR012914 Purine catabolism PurC-like domain LIT28_15470 IPR025736 PucR C-terminal helix-turn-helix domain LIT28_15470 IPR042070 PucR C-terminal helix-turn-helix domain superfamily LIT28_15470 IPR041522 CdaR, GGDEF-like domain LIT28_15475 IPR011701 Major facilitator superfamily LIT28_15475 IPR005829 Sugar transporter, conserved site LIT28_15475 IPR036259 MFS transporter superfamily LIT28_15475 IPR020846 Major facilitator superfamily domain LIT28_15475 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family LIT28_15480 IPR013108 Amidohydrolase 3 LIT28_15480 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_15480 IPR032466 Metal-dependent hydrolase LIT28_15480 IPR033932 YtcJ like LIT28_15490 IPR022927 RNA pyrophosphohydrolase RppH LIT28_15490 IPR000086 NUDIX hydrolase domain LIT28_15490 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_15490 IPR020476 NUDIX hydrolase LIT28_15490 IPR020084 NUDIX hydrolase, conserved site LIT28_15495 IPR036930 WGR domain superfamily LIT28_15495 IPR016835 Uncharacterised conserved protein UCP026317, WGR LIT28_15495 IPR008893 WGR domain LIT28_15500 IPR016040 NAD(P)-binding domain LIT28_15500 IPR036291 NAD(P)-binding domain superfamily LIT28_15515 IPR008979 Galactose-binding-like domain superfamily LIT28_15515 IPR009057 Homeobox-like domain superfamily LIT28_15515 IPR018060 DNA binding HTH domain, AraC-type LIT28_15520 IPR000182 GNAT domain LIT28_15520 IPR017255 Acetyltransferase, GNAT, predicted LIT28_15520 IPR016181 Acyl-CoA N-acyltransferase LIT28_15535 IPR000620 EamA domain LIT28_15540 IPR036390 Winged helix DNA-binding domain superfamily LIT28_15540 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_15540 IPR004839 Aminotransferase, class I/classII LIT28_15540 IPR000524 Transcription regulator HTH, GntR LIT28_15540 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_15540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_15540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_15545 IPR003791 Protein of unknown function UPF0178 LIT28_15550 IPR024997 Protein of unknown function DUF3892 LIT28_15580 IPR002781 Transmembrane protein TauE-like LIT28_15590 IPR004841 Amino acid permease/ SLC12A domain LIT28_15590 IPR004840 Amino acid permease, conserved site LIT28_15600 IPR016024 Armadillo-type fold LIT28_15600 IPR014825 DNA alkylation repair enzyme LIT28_15600 IPR021133 HEAT, type 2 LIT28_15605 IPR011789 Cu(I)-responsive transcriptional regulator LIT28_15605 IPR009061 Putative DNA-binding domain superfamily LIT28_15605 IPR000551 MerR-type HTH domain LIT28_15605 IPR015358 Transcription regulator MerR, DNA binding LIT28_15615 IPR000086 NUDIX hydrolase domain LIT28_15615 IPR020084 NUDIX hydrolase, conserved site LIT28_15615 IPR020476 NUDIX hydrolase LIT28_15615 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_15615 IPR003561 Mutator MutT LIT28_15620 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase LIT28_15620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_15625 IPR019756 Peptidase S26A, signal peptidase I, serine active site LIT28_15625 IPR036286 LexA/Signal peptidase-like superfamily LIT28_15625 IPR019533 Peptidase S26 LIT28_15625 IPR019757 Peptidase S26A, signal peptidase I, lysine active site LIT28_15625 IPR019758 Peptidase S26A, signal peptidase I, conserved site LIT28_15625 IPR000223 Peptidase S26A, signal peptidase I LIT28_15630 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_15630 IPR001460 Penicillin-binding protein, transpeptidase LIT28_15630 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_15630 IPR012338 Beta-lactamase/transpeptidase-like LIT28_15640 IPR028628 Sirtuin, class U LIT28_15640 IPR026591 Sirtuin, catalytic core small domain superfamily LIT28_15640 IPR003000 Sirtuin family LIT28_15640 IPR026590 Sirtuin family, catalytic core domain LIT28_15640 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIT28_15645 IPR000816 Peptidase C15, pyroglutamyl peptidase I LIT28_15645 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like LIT28_15645 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily LIT28_15645 IPR029762 Pyroglutamyl peptidase I, bacterial-type LIT28_15645 IPR033694 Pyroglutamyl peptidase I, Cys active site LIT28_15645 IPR033693 Pyroglutamyl peptidase I, Glu active site LIT28_15660 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_15660 IPR005501 LamB/YcsF/PxpA-like LIT28_15665 IPR029000 Cyclophilin-like domain superfamily LIT28_15665 IPR003778 Carboxyltransferase domain, subdomain A and B LIT28_15670 IPR010016 KipI family LIT28_15670 IPR029000 Cyclophilin-like domain superfamily LIT28_15670 IPR003833 Carboxyltransferase domain, subdomain C and D LIT28_15675 IPR014757 Transcription regulator IclR, C-terminal LIT28_15675 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_15675 IPR036390 Winged helix DNA-binding domain superfamily LIT28_15675 IPR029016 GAF-like domain superfamily LIT28_15675 IPR005471 Transcription regulator IclR, N-terminal LIT28_15690 IPR019533 Peptidase S26 LIT28_15690 IPR019756 Peptidase S26A, signal peptidase I, serine active site LIT28_15690 IPR019757 Peptidase S26A, signal peptidase I, lysine active site LIT28_15690 IPR019758 Peptidase S26A, signal peptidase I, conserved site LIT28_15690 IPR036286 LexA/Signal peptidase-like superfamily LIT28_15690 IPR000223 Peptidase S26A, signal peptidase I LIT28_15695 IPR005627 Copper homeostasis protein CutC LIT28_15695 IPR023648 Copper homeostasis CutC domain LIT28_15695 IPR036822 Copper homeostasis (CutC) domain superfamily LIT28_15700 IPR010897 Sporulation stage II, protein P LIT28_15705 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_15705 IPR001845 HTH ArsR-type DNA-binding domain LIT28_15705 IPR011991 ArsR-like helix-turn-helix domain LIT28_15705 IPR036390 Winged helix DNA-binding domain superfamily LIT28_15715 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIT28_15715 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIT28_15715 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIT28_15715 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIT28_15715 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIT28_15715 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LIT28_15730 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LIT28_15750 IPR020216 Uncharacterised protein family, YncE LIT28_15760 IPR001647 DNA-binding HTH domain, TetR-type LIT28_15760 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_15760 IPR009057 Homeobox-like domain superfamily LIT28_15765 IPR036637 Phosphohistidine domain superfamily LIT28_15765 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding LIT28_15765 IPR013815 ATP-grasp fold, subdomain 1 LIT28_15765 IPR008279 PEP-utilising enzyme, mobile domain LIT28_15775 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_15775 IPR001279 Metallo-beta-lactamase LIT28_15790 IPR012851 Spore coat protein CotF-like LIT28_15790 IPR016493 Spore coat protein CotF LIT28_15795 IPR014988 Uncharacterised protein family, YqcI/YcgG LIT28_15800 IPR001123 Amino acid exporter protein, LeuE-type LIT28_15805 IPR004841 Amino acid permease/ SLC12A domain LIT28_15815 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_15815 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_15815 IPR038300 SASP, alpha/beta-type superfamily LIT28_15820 IPR019649 Protein of unknown function DUF2512 LIT28_15825 IPR021617 Protein of unknown function DUF3231 LIT28_15825 IPR012347 Ferritin-like LIT28_15830 IPR038300 SASP, alpha/beta-type superfamily LIT28_15830 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_15830 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_15835 IPR011032 GroES-like superfamily LIT28_15835 IPR036291 NAD(P)-binding domain superfamily LIT28_15835 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LIT28_15835 IPR027399 Alcohol dehydrogenase GroES-associated LIT28_15835 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_15835 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_15850 IPR018951 Fumarase C, C-terminal LIT28_15850 IPR024083 Fumarase/histidase, N-terminal LIT28_15850 IPR000362 Fumarate lyase family LIT28_15850 IPR022761 Fumarate lyase, N-terminal LIT28_15850 IPR008948 L-Aspartase-like LIT28_15850 IPR004708 Aspartate ammonia-lyase LIT28_15850 IPR020557 Fumarate lyase, conserved site LIT28_15855 IPR027473 L-asparaginase, C-terminal LIT28_15855 IPR006034 Asparaginase/glutaminase-like LIT28_15855 IPR040919 Asparaginase/glutaminase, C-terminal LIT28_15855 IPR027475 Asparaginase/glutaminase, active site 2 LIT28_15855 IPR036152 Asparaginase/glutaminase-like superfamily LIT28_15855 IPR006033 Type I L-asparaginase family LIT28_15855 IPR020827 Asparaginase/glutaminase, active site 1 LIT28_15855 IPR037152 L-asparaginase, N-terminal domain superfamily LIT28_15855 IPR027474 L-asparaginase, N-terminal LIT28_15855 IPR041725 Type I (cytosolic) L-asparaginase LIT28_15860 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_15860 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_15875 IPR008844 Spore germination GerAC LIT28_15875 IPR038501 Spore germination GerAC superfamily LIT28_15880 IPR004761 Spore germination GerAB LIT28_15885 IPR004995 Bacillus/Clostridium Ger spore germination protein LIT28_15890 IPR005467 Histidine kinase domain LIT28_15890 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_15890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_15890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_15890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_15890 IPR013767 PAS fold LIT28_15890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_15890 IPR000014 PAS domain LIT28_15890 IPR035965 PAS domain superfamily LIT28_15895 IPR008414 Hemolysin BL-binding component LIT28_15900 IPR008414 Hemolysin BL-binding component LIT28_15915 IPR009057 Homeobox-like domain superfamily LIT28_15915 IPR018060 DNA binding HTH domain, AraC-type LIT28_15915 IPR041522 CdaR, GGDEF-like domain LIT28_15920 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_15920 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_15920 IPR038300 SASP, alpha/beta-type superfamily LIT28_15925 IPR001162 UvrC family homology region LIT28_15925 IPR038476 UvrC homology region 2 superfamily LIT28_15925 IPR041663 DisA/LigA, helix-hairpin-helix motif LIT28_15925 IPR000305 GIY-YIG endonuclease LIT28_15925 IPR035901 GIY-YIG endonuclease superfamily LIT28_15925 IPR010994 RuvA domain 2-like LIT28_15925 IPR001943 UVR domain LIT28_15925 IPR036876 UVR domain superfamily LIT28_15925 IPR004791 UvrABC system, subunit C LIT28_15930 IPR002293 Amino acid/polyamine transporter I LIT28_15935 IPR004685 Branched-chain amino acid transport system II carrier protein LIT28_15940 IPR000304 Pyrroline-5-carboxylate reductase LIT28_15940 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain LIT28_15940 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_15940 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LIT28_15940 IPR036291 NAD(P)-binding domain superfamily LIT28_15945 IPR032808 DoxX family LIT28_15950 IPR015884 Malic enzyme, conserved site LIT28_15950 IPR037062 Malic enzyme, N-terminal domain superfamily LIT28_15950 IPR012301 Malic enzyme, N-terminal domain LIT28_15950 IPR036291 NAD(P)-binding domain superfamily LIT28_15950 IPR012302 Malic enzyme, NAD-binding LIT28_15950 IPR001891 Malic oxidoreductase LIT28_15960 IPR008844 Spore germination GerAC LIT28_15960 IPR038501 Spore germination GerAC superfamily LIT28_15965 IPR004761 Spore germination GerAB LIT28_15970 IPR004995 Bacillus/Clostridium Ger spore germination protein LIT28_15975 IPR001789 Signal transduction response regulator, receiver domain LIT28_15975 IPR013972 YcbB domain LIT28_15975 IPR011006 CheY-like superfamily LIT28_15980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_15980 IPR005467 Histidine kinase domain LIT28_15980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_15980 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_15985 IPR015868 Glutaminase LIT28_15985 IPR012338 Beta-lactamase/transpeptidase-like LIT28_15990 IPR001463 Sodium:alanine symporter LIT28_16020 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LIT28_16020 IPR029052 Metallo-dependent phosphatase-like LIT28_16020 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_16020 IPR041498 Bacterial Ig domain LIT28_16020 IPR006179 5'-Nucleotidase/apyrase LIT28_16020 IPR006146 5'-Nucleotidase, conserved site LIT28_16020 IPR008334 5'-Nucleotidase, C-terminal LIT28_16025 IPR020835 Catalase superfamily LIT28_16025 IPR010582 Catalase immune-responsive domain LIT28_16025 IPR037060 Catalase core domain superfamily LIT28_16025 IPR011614 Catalase core domain LIT28_16025 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 LIT28_16025 IPR024708 Catalase active site LIT28_16025 IPR018028 Catalase, mono-functional, haem-containing LIT28_16025 IPR002226 Catalase haem-binding site LIT28_16030 IPR000639 Epoxide hydrolase-like LIT28_16030 IPR029058 Alpha/Beta hydrolase fold LIT28_16030 IPR000073 Alpha/beta hydrolase fold-1 LIT28_16035 IPR000868 Isochorismatase-like LIT28_16035 IPR036380 Isochorismatase-like superfamily LIT28_16050 IPR032466 Metal-dependent hydrolase LIT28_16050 IPR006680 Amidohydrolase-related LIT28_16050 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_16055 IPR036390 Winged helix DNA-binding domain superfamily LIT28_16055 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16055 IPR005119 LysR, substrate-binding LIT28_16055 IPR000847 Transcription regulator HTH, LysR LIT28_16065 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB LIT28_16110 IPR038330 TspO/MBR-related superfamily LIT28_16110 IPR004307 TspO/MBR-related protein LIT28_16115 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LIT28_16115 IPR002081 Cryptochrome/DNA photolyase class 1 LIT28_16115 IPR006050 DNA photolyase, N-terminal LIT28_16115 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LIT28_16115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_16115 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily LIT28_16115 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily LIT28_16120 IPR036874 Carbonic anhydrase superfamily LIT28_16125 IPR018752 Uncharacterised protein family UPF0753 LIT28_16130 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LIT28_16130 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal LIT28_16135 IPR018745 Domain of unknown function DUF2294 LIT28_16150 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase LIT28_16150 IPR000537 UbiA prenyltransferase family LIT28_16150 IPR026046 UbiA prenyltransferase domain containing protein 1 LIT28_16155 IPR024542 Domain of unknown function DUF3880 LIT28_16185 IPR036196 Phosphotyrosine protein phosphatase I superfamily LIT28_16185 IPR023485 Phosphotyrosine protein phosphatase I LIT28_16185 IPR014064 Arsenate reductase ArsC LIT28_16190 IPR038770 Sodium/solute symporter superfamily LIT28_16190 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 LIT28_16190 IPR004706 Arsenical-resistance protein Acr3 LIT28_16195 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_16195 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_16195 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_16200 IPR018334 ArsR-type transcription regulator, HTH motif LIT28_16200 IPR036390 Winged helix DNA-binding domain superfamily LIT28_16200 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16200 IPR001845 HTH ArsR-type DNA-binding domain LIT28_16200 IPR011991 ArsR-like helix-turn-helix domain LIT28_16215 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_16215 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_16220 IPR001466 Beta-lactamase-related LIT28_16220 IPR012338 Beta-lactamase/transpeptidase-like LIT28_16240 IPR002559 Transposase, IS4-like LIT28_16240 IPR012337 Ribonuclease H-like superfamily LIT28_16245 IPR020846 Major facilitator superfamily domain LIT28_16245 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIT28_16245 IPR005829 Sugar transporter, conserved site LIT28_16245 IPR004734 Multidrug resistance protein LIT28_16245 IPR036259 MFS transporter superfamily LIT28_16245 IPR011701 Major facilitator superfamily LIT28_16250 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LIT28_16250 IPR036736 ACP-like superfamily LIT28_16250 IPR013120 Male sterility, NAD-binding LIT28_16250 IPR036291 NAD(P)-binding domain superfamily LIT28_16250 IPR009081 Phosphopantetheine binding ACP domain LIT28_16250 IPR010080 Thioester reductase-like domain LIT28_16255 IPR041646 IcaR, C-terminal LIT28_16255 IPR009057 Homeobox-like domain superfamily LIT28_16255 IPR001647 DNA-binding HTH domain, TetR-type LIT28_16260 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIT28_16260 IPR036291 NAD(P)-binding domain superfamily LIT28_16260 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_16260 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_16265 IPR000485 AsnC-type HTH domain LIT28_16265 IPR036390 Winged helix DNA-binding domain superfamily LIT28_16265 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16265 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LIT28_16265 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LIT28_16265 IPR019888 Transcription regulator AsnC-type LIT28_16265 IPR011008 Dimeric alpha-beta barrel LIT28_16280 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_16280 IPR018146 Glyoxalase I, conserved site LIT28_16280 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_16280 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_16295 IPR005650 BlaI transcriptional regulatory family LIT28_16295 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16295 IPR036390 Winged helix DNA-binding domain superfamily LIT28_16300 IPR014910 Putative monooxygenase YdhR LIT28_16300 IPR011008 Dimeric alpha-beta barrel LIT28_16310 IPR023187 Transcriptional regulator MarR-type, conserved site LIT28_16310 IPR000835 MarR-type HTH domain LIT28_16310 IPR036390 Winged helix DNA-binding domain superfamily LIT28_16310 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16315 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIT28_16315 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding LIT28_16315 IPR001128 Cytochrome P450 LIT28_16315 IPR017972 Cytochrome P450, conserved site LIT28_16315 IPR036396 Cytochrome P450 superfamily LIT28_16315 IPR001094 Flavodoxin-like LIT28_16315 IPR017927 FAD-binding domain, ferredoxin reductase-type LIT28_16315 IPR029039 Flavoprotein-like superfamily LIT28_16315 IPR008254 Flavodoxin/nitric oxide synthase LIT28_16315 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIT28_16315 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily LIT28_16315 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase LIT28_16315 IPR017938 Riboflavin synthase-like beta-barrel LIT28_16315 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIT28_16320 IPR004638 Drug resistance transporter EmrB-like LIT28_16320 IPR011701 Major facilitator superfamily LIT28_16320 IPR036259 MFS transporter superfamily LIT28_16320 IPR020846 Major facilitator superfamily domain LIT28_16345 IPR018060 DNA binding HTH domain, AraC-type LIT28_16345 IPR009057 Homeobox-like domain superfamily LIT28_16345 IPR004026 Ada DNA repair, metal-binding LIT28_16345 IPR035451 Ada-like domain superfamily LIT28_16345 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA LIT28_16345 IPR018062 HTH domain AraC-type, conserved site LIT28_16355 IPR001466 Beta-lactamase-related LIT28_16355 IPR012338 Beta-lactamase/transpeptidase-like LIT28_16375 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_16375 IPR039420 Transcriptional regulatory protein WalR-like LIT28_16375 IPR001789 Signal transduction response regulator, receiver domain LIT28_16375 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16375 IPR011006 CheY-like superfamily LIT28_16375 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response LIT28_16380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_16380 IPR003660 HAMP domain LIT28_16380 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_16380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_16380 IPR005467 Histidine kinase domain LIT28_16380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_16380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_16405 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase LIT28_16405 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_16405 IPR005966 D-cysteine desulfhydrase LIT28_16405 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_16415 IPR012338 Beta-lactamase/transpeptidase-like LIT28_16415 IPR001586 Beta-lactamase, class-C active site LIT28_16415 IPR001466 Beta-lactamase-related LIT28_16420 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative LIT28_16420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_16420 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP LIT28_16420 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp LIT28_16435 IPR003593 AAA+ ATPase domain LIT28_16435 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_16435 IPR003439 ABC transporter-like LIT28_16440 IPR003838 ABC transporter permease protein domain LIT28_16455 IPR005467 Histidine kinase domain LIT28_16455 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_16455 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_16455 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_16455 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_16455 IPR003660 HAMP domain LIT28_16455 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_16460 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_16460 IPR001789 Signal transduction response regulator, receiver domain LIT28_16460 IPR039420 Transcriptional regulatory protein WalR-like LIT28_16460 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16460 IPR011006 CheY-like superfamily LIT28_16465 IPR003740 Uncharacterised membrane protein YitT LIT28_16465 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_16465 IPR019264 Domain of unknown function DUF2179 LIT28_16485 IPR003507 Peptidase family S66 LIT28_16485 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal LIT28_16485 IPR029062 Class I glutamine amidotransferase-like LIT28_16485 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily LIT28_16485 IPR040921 LD-carboxypeptidase, C-terminal LIT28_16485 IPR040449 LD-carboxypeptidase, N-terminal LIT28_16495 IPR001279 Metallo-beta-lactamase LIT28_16495 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_16500 IPR023753 FAD/NAD(P)-binding domain LIT28_16500 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_16505 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LIT28_16505 IPR030395 Glycerophosphodiester phosphodiesterase domain LIT28_16520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_16520 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_16520 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_16520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_16520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_16520 IPR005467 Histidine kinase domain LIT28_16525 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_16525 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16525 IPR039420 Transcriptional regulatory protein WalR-like LIT28_16525 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_16525 IPR001789 Signal transduction response regulator, receiver domain LIT28_16525 IPR011006 CheY-like superfamily LIT28_16530 IPR025296 Domain of unknown function DUF4158 LIT28_16530 IPR002513 Tn3 transposase DDE domain LIT28_16535 IPR012338 Beta-lactamase/transpeptidase-like LIT28_16535 IPR001466 Beta-lactamase-related LIT28_16545 IPR020846 Major facilitator superfamily domain LIT28_16545 IPR036259 MFS transporter superfamily LIT28_16545 IPR011701 Major facilitator superfamily LIT28_16550 IPR004104 Oxidoreductase, C-terminal LIT28_16550 IPR036291 NAD(P)-binding domain superfamily LIT28_16550 IPR000683 Oxidoreductase, N-terminal LIT28_16555 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_16555 IPR006380 Sucrose-phosphatase-like, N-terminal LIT28_16555 IPR023214 HAD superfamily LIT28_16555 IPR036412 HAD-like superfamily LIT28_16560 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_16560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_16560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_16560 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LIT28_16565 IPR000843 LacI-type HTH domain LIT28_16565 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_16565 IPR028082 Periplasmic binding protein-like I LIT28_16580 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LIT28_16580 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain LIT28_16585 IPR036573 Carbohydrate-binding module superfamily 5/12 LIT28_16585 IPR004302 Cellulose/chitin-binding protein, N-terminal LIT28_16585 IPR020879 N-acetylglucosamine-binding protein A LIT28_16585 IPR014756 Immunoglobulin E-set LIT28_16585 IPR041029 N-acetylglucosamine binding protein A domain 2 LIT28_16595 IPR004995 Bacillus/Clostridium Ger spore germination protein LIT28_16635 IPR013783 Immunoglobulin-like fold LIT28_16635 IPR017853 Glycoside hydrolase superfamily LIT28_16635 IPR001579 Glycoside hydrolase, chitinase active site LIT28_16635 IPR001223 Glycoside hydrolase family 18, catalytic domain LIT28_16635 IPR036116 Fibronectin type III superfamily LIT28_16635 IPR003961 Fibronectin type III LIT28_16635 IPR011583 Chitinase II LIT28_16635 IPR029070 Chitinase insertion domain superfamily LIT28_16635 IPR001919 Carbohydrate-binding type-2 domain LIT28_16635 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily LIT28_16635 IPR012291 CBM2, carbohydrate-binding domain superfamily LIT28_16635 IPR018366 Carbohydrate-binding type-2, conserved site LIT28_16650 IPR001126 UmuC domain LIT28_16650 IPR036775 DNA polymerase, Y-family, little finger domain superfamily LIT28_16650 IPR024728 DNA polymerase type-Y, HhH motif LIT28_16650 IPR017961 DNA polymerase, Y-family, little finger domain LIT28_16665 IPR033479 Double Cache domain 1 LIT28_16665 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_16665 IPR029151 Periplasmic sensor-like domain superfamily LIT28_16665 IPR003660 HAMP domain LIT28_16675 IPR016181 Acyl-CoA N-acyltransferase LIT28_16675 IPR000182 GNAT domain LIT28_16685 IPR038300 SASP, alpha/beta-type superfamily LIT28_16685 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_16685 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_16690 IPR041379 Collagenase ColG, catalytic helper subdomain LIT28_16690 IPR013783 Immunoglobulin-like fold LIT28_16690 IPR013661 Peptidase M9, collagenase, N-terminal domain LIT28_16690 IPR002169 Peptidase M9A/M9B, collagenase, bacterial LIT28_16690 IPR035986 PKD domain superfamily LIT28_16690 IPR000601 PKD domain LIT28_16690 IPR022409 PKD/Chitinase domain LIT28_16700 IPR011701 Major facilitator superfamily LIT28_16700 IPR020846 Major facilitator superfamily domain LIT28_16700 IPR036259 MFS transporter superfamily LIT28_16705 IPR011075 Tetracyclin repressor-like, C-terminal domain LIT28_16705 IPR001647 DNA-binding HTH domain, TetR-type LIT28_16705 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_16705 IPR009057 Homeobox-like domain superfamily LIT28_16715 IPR036390 Winged helix DNA-binding domain superfamily LIT28_16715 IPR001845 HTH ArsR-type DNA-binding domain LIT28_16715 IPR011991 ArsR-like helix-turn-helix domain LIT28_16715 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16720 IPR004694 Hydroxy amino acid transporter LIT28_16725 IPR005130 Serine dehydratase-like, alpha subunit LIT28_16725 IPR004642 Serine dehydratase, alpha subunit LIT28_16730 IPR005131 Serine dehydratase beta chain LIT28_16730 IPR002912 ACT domain LIT28_16730 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit LIT28_16730 IPR029009 Allosteric substrate binding domain superfamily LIT28_16740 IPR005814 Aminotransferase class-III LIT28_16740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_16740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_16740 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_16740 IPR012773 Ectoine biosynthetic protein LIT28_16740 IPR004637 2,4-diaminobutyrate 4-transaminase LIT28_16745 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LIT28_16745 IPR011125 Zinc finger, HypF-type LIT28_16745 IPR006070 YrdC-like domain LIT28_16745 IPR017968 Acylphosphatase, conserved site LIT28_16745 IPR036046 Acylphosphatase-like domain superfamily LIT28_16745 IPR001792 Acylphosphatase-like domain LIT28_16745 IPR004421 Carbamoyltransferase, HypF-type LIT28_16745 IPR041440 HypF, Kae1-like domain LIT28_16750 IPR011854 Carbamoyl dehydratase HypE LIT28_16750 IPR036921 PurM-like, N-terminal domain superfamily LIT28_16750 IPR016188 PurM-like, N-terminal domain LIT28_16750 IPR010918 PurM-like, C-terminal domain LIT28_16750 IPR036676 PurM-like, C-terminal domain superfamily LIT28_16755 IPR019916 Isochorismatase, RutB LIT28_16755 IPR000868 Isochorismatase-like LIT28_16755 IPR036380 Isochorismatase-like superfamily LIT28_16760 IPR036390 Winged helix DNA-binding domain superfamily LIT28_16760 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16760 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LIT28_16760 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LIT28_16760 IPR019888 Transcription regulator AsnC-type LIT28_16760 IPR000485 AsnC-type HTH domain LIT28_16760 IPR011008 Dimeric alpha-beta barrel LIT28_16760 IPR011991 ArsR-like helix-turn-helix domain LIT28_16765 IPR002293 Amino acid/polyamine transporter I LIT28_16780 IPR036291 NAD(P)-binding domain superfamily LIT28_16780 IPR029009 Allosteric substrate binding domain superfamily LIT28_16780 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LIT28_16780 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LIT28_16780 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT28_16780 IPR002912 ACT domain LIT28_16780 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LIT28_16780 IPR006236 D-3-phosphoglycerate dehydrogenase LIT28_16785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_16785 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LIT28_16785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_16785 IPR000192 Aminotransferase class V domain LIT28_16785 IPR022278 Phosphoserine aminotransferase LIT28_16785 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_16800 IPR013096 Cupin 2, conserved barrel LIT28_16800 IPR019780 Germin, manganese binding site LIT28_16800 IPR014710 RmlC-like jelly roll fold LIT28_16800 IPR011051 RmlC-like cupin domain superfamily LIT28_16805 IPR018062 HTH domain AraC-type, conserved site LIT28_16805 IPR020449 Transcription regulator HTH, AraC- type LIT28_16805 IPR009057 Homeobox-like domain superfamily LIT28_16805 IPR002491 ABC transporter periplasmic binding domain LIT28_16805 IPR018060 DNA binding HTH domain, AraC-type LIT28_16820 IPR029055 Nucleophile aminohydrolases, N-terminal LIT28_16820 IPR014395 Penicillin/GL-7-ACA/AHL acylase LIT28_16820 IPR023343 Penicillin amidase type, domain 1 LIT28_16820 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase LIT28_16830 IPR036779 LysM domain superfamily LIT28_16830 IPR036365 PGBD-like superfamily LIT28_16830 IPR002477 Peptidoglycan binding-like LIT28_16830 IPR036366 PGBD superfamily LIT28_16830 IPR002502 N-acetylmuramoyl-L-alanine amidase domain LIT28_16830 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily LIT28_16830 IPR018392 LysM domain LIT28_16840 IPR041129 CdiI immunity protein LIT28_16850 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_16850 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_16850 IPR013572 Transcription regulator MAATS, C-terminal LIT28_16850 IPR009057 Homeobox-like domain superfamily LIT28_16850 IPR001647 DNA-binding HTH domain, TetR-type LIT28_16855 IPR036259 MFS transporter superfamily LIT28_16855 IPR020846 Major facilitator superfamily domain LIT28_16855 IPR011701 Major facilitator superfamily LIT28_16890 IPR025930 NETI protein LIT28_16895 IPR036259 MFS transporter superfamily LIT28_16895 IPR020846 Major facilitator superfamily domain LIT28_16895 IPR011701 Major facilitator superfamily LIT28_16905 IPR000073 Alpha/beta hydrolase fold-1 LIT28_16905 IPR000639 Epoxide hydrolase-like LIT28_16905 IPR029058 Alpha/Beta hydrolase fold LIT28_16910 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_16910 IPR000835 MarR-type HTH domain LIT28_16910 IPR036390 Winged helix DNA-binding domain superfamily LIT28_16915 IPR011701 Major facilitator superfamily LIT28_16915 IPR020846 Major facilitator superfamily domain LIT28_16915 IPR036259 MFS transporter superfamily LIT28_16925 IPR032688 ABC-2 family transporter protein LIT28_16930 IPR003593 AAA+ ATPase domain LIT28_16930 IPR003439 ABC transporter-like LIT28_16930 IPR017871 ABC transporter, conserved site LIT28_16930 IPR025302 Domain of unknown function DUF4162 LIT28_16930 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_16935 IPR027379 Cardiolipin synthase N-terminal LIT28_16945 IPR020348 Uncharacterised protein family YvaD LIT28_16955 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_16955 IPR009057 Homeobox-like domain superfamily LIT28_16955 IPR001647 DNA-binding HTH domain, TetR-type LIT28_16965 IPR001466 Beta-lactamase-related LIT28_16965 IPR012338 Beta-lactamase/transpeptidase-like LIT28_16970 IPR036359 Thiol-activated cytolysin superfamily LIT28_16970 IPR035390 Thiol-activated cytolysin C-terminal LIT28_16970 IPR001869 Thiol-activated cytolysin LIT28_16970 IPR038700 Thiol-activated cytolysin, C-terminal domain superfamily LIT28_16970 IPR036363 Thiol-activated cytolysin, alpha-beta domain superfamily LIT28_16975 IPR006161 Conserved hypothetical protein CHP00336 LIT28_16975 IPR006160 Short chain fatty acid transporter AtoE LIT28_16985 IPR003680 Flavodoxin-like fold LIT28_16985 IPR029039 Flavoprotein-like superfamily LIT28_17005 IPR025576 YwiC-like protein LIT28_17015 IPR003593 AAA+ ATPase domain LIT28_17015 IPR003439 ABC transporter-like LIT28_17015 IPR017871 ABC transporter, conserved site LIT28_17015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_17020 IPR024919 ECF transporter transmembrane protein EcfT LIT28_17020 IPR003339 ABC/ECF transporter, transmembrane component LIT28_17035 IPR010203 Regulator of ribonuclease activity A LIT28_17035 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LIT28_17035 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily LIT28_17040 IPR018385 C4-dicarboxylate anaerobic carrier-like LIT28_17045 IPR007346 Endonuclease I LIT28_17050 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LIT28_17050 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily LIT28_17050 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain LIT28_17055 IPR012338 Beta-lactamase/transpeptidase-like LIT28_17055 IPR001466 Beta-lactamase-related LIT28_17060 IPR000792 Transcription regulator LuxR, C-terminal LIT28_17060 IPR001789 Signal transduction response regulator, receiver domain LIT28_17060 IPR011006 CheY-like superfamily LIT28_17060 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_17065 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain LIT28_17065 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_17065 IPR004154 Anticodon-binding LIT28_17065 IPR015807 Histidine-tRNA ligase LIT28_17065 IPR036621 Anticodon-binding domain superfamily LIT28_17065 IPR033656 Histidyl-anticodon-binding LIT28_17065 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit LIT28_17080 IPR002577 Helix-turn-helix, HxlR type LIT28_17080 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17080 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17085 IPR033878 Nitroreductase NfsB-like LIT28_17085 IPR029479 Nitroreductase LIT28_17085 IPR000415 Nitroreductase-like LIT28_17095 IPR011037 Pyruvate kinase-like, insert domain superfamily LIT28_17095 IPR036918 Pyruvate kinase, C-terminal domain superfamily LIT28_17095 IPR015795 Pyruvate kinase, C-terminal LIT28_17095 IPR015793 Pyruvate kinase, barrel LIT28_17095 IPR040442 Pyruvate kinase-like domain superfamily LIT28_17095 IPR001697 Pyruvate kinase LIT28_17095 IPR036637 Phosphohistidine domain superfamily LIT28_17095 IPR008279 PEP-utilising enzyme, mobile domain LIT28_17095 IPR015806 Pyruvate kinase, insert domain superfamily LIT28_17095 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIT28_17105 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_17105 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_17105 IPR036291 NAD(P)-binding domain superfamily LIT28_17115 IPR017871 ABC transporter, conserved site LIT28_17115 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_17115 IPR003593 AAA+ ATPase domain LIT28_17115 IPR003439 ABC transporter-like LIT28_17140 IPR036412 HAD-like superfamily LIT28_17140 IPR006439 HAD hydrolase, subfamily IA LIT28_17140 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB LIT28_17140 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_17140 IPR023214 HAD superfamily LIT28_17140 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_17150 IPR000387 Tyrosine specific protein phosphatases domain LIT28_17150 IPR026893 Tyrosine/serine-protein phosphatase IphP-type LIT28_17150 IPR029021 Protein-tyrosine phosphatase-like LIT28_17165 IPR020476 NUDIX hydrolase LIT28_17165 IPR036412 HAD-like superfamily LIT28_17165 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_17165 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_17165 IPR020084 NUDIX hydrolase, conserved site LIT28_17165 IPR023214 HAD superfamily LIT28_17165 IPR000086 NUDIX hydrolase domain LIT28_17175 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_17175 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_17175 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_17180 IPR004654 Glucokinase ROK LIT28_17180 IPR000600 ROK family LIT28_17185 IPR011701 Major facilitator superfamily LIT28_17185 IPR036259 MFS transporter superfamily LIT28_17185 IPR020846 Major facilitator superfamily domain LIT28_17190 IPR011004 Trimeric LpxA-like superfamily LIT28_17190 IPR001451 Hexapeptide repeat LIT28_17190 IPR024688 Maltose/galactoside acetyltransferase LIT28_17190 IPR018357 Hexapeptide transferase, conserved site LIT28_17195 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_17195 IPR002305 Aminoacyl-tRNA synthetase, class Ic LIT28_17195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_17195 IPR036913 YegP-like superfamily LIT28_17195 IPR024109 Tryptophan-tRNA ligase, bacterial-type LIT28_17195 IPR002306 Tryptophan-tRNA ligase LIT28_17200 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal LIT28_17200 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal LIT28_17200 IPR036291 NAD(P)-binding domain superfamily LIT28_17200 IPR036169 DXP reductoisomerase, C-terminal domain superfamily LIT28_17200 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase LIT28_17200 IPR026877 DXP reductoisomerase C-terminal domain LIT28_17205 IPR002549 Transmembrane protein TqsA-like LIT28_17225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_17225 IPR027555 tRNA (mo5U34)-methyltransferase-like LIT28_17225 IPR010017 tRNA U34 carboxymethyltransferase LIT28_17235 IPR036259 MFS transporter superfamily LIT28_17235 IPR020846 Major facilitator superfamily domain LIT28_17235 IPR011701 Major facilitator superfamily LIT28_17235 IPR022855 Multidrug resistance protein MdtH LIT28_17255 IPR019264 Domain of unknown function DUF2179 LIT28_17255 IPR022930 Protein of unknown function UPF0316 LIT28_17265 IPR016169 FAD-binding, type PCMH, subdomain 2 LIT28_17265 IPR000644 CBS domain LIT28_17265 IPR002550 CNNM, transmembrane domain LIT28_17265 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_17265 IPR005170 Transporter-associated domain LIT28_17270 IPR000551 MerR-type HTH domain LIT28_17270 IPR009061 Putative DNA-binding domain superfamily LIT28_17280 IPR005835 Nucleotidyl transferase domain LIT28_17280 IPR013446 Glucose-1-phosphate cytidylyltransferase LIT28_17280 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_17285 IPR016040 NAD(P)-binding domain LIT28_17285 IPR013445 CDP-glucose 4,6-dehydratase LIT28_17285 IPR036291 NAD(P)-binding domain superfamily LIT28_17290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_17290 IPR038576 Methyltransferase putative zinc binding domain superfamily LIT28_17290 IPR013630 Methyltransferase putative zinc binding domain LIT28_17290 IPR013691 C-methyltransferase LIT28_17295 IPR036291 NAD(P)-binding domain superfamily LIT28_17295 IPR001509 NAD-dependent epimerase/dehydratase LIT28_17305 IPR000620 EamA domain LIT28_17310 IPR001646 Pentapeptide repeat LIT28_17315 IPR010696 Protein of unknown function DUF1272 LIT28_17320 IPR015943 WD40/YVTN repeat-like-containing domain superfamily LIT28_17320 IPR019405 Lactonase, 7-bladed beta propeller LIT28_17320 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily LIT28_17325 IPR000577 Carbohydrate kinase, FGGY LIT28_17325 IPR018485 Carbohydrate kinase, FGGY, C-terminal LIT28_17325 IPR018483 Carbohydrate kinase, FGGY, conserved site LIT28_17325 IPR018484 Carbohydrate kinase, FGGY, N-terminal LIT28_17325 IPR006002 Gluconate kinase LIT28_17330 IPR003474 Gluconate transporter LIT28_17335 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase LIT28_17335 IPR013785 Aldolase-type TIM barrel LIT28_17335 IPR001585 Transaldolase/Fructose-6-phosphate aldolase LIT28_17335 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial LIT28_17335 IPR018225 Transaldolase, active site LIT28_17335 IPR022999 Transaldolase type 3B, putative LIT28_17340 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_17340 IPR006114 6-phosphogluconate dehydrogenase, C-terminal LIT28_17340 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type LIT28_17340 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_17340 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LIT28_17340 IPR006184 6-phosphogluconate-binding site LIT28_17340 IPR006183 6-phosphogluconate dehydrogenase LIT28_17340 IPR036291 NAD(P)-binding domain superfamily LIT28_17345 IPR029061 Thiamin diphosphate-binding fold LIT28_17345 IPR005474 Transketolase, N-terminal LIT28_17345 IPR033247 Transketolase family LIT28_17345 IPR033248 Transketolase, C-terminal domain LIT28_17345 IPR020826 Transketolase binding site LIT28_17345 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LIT28_17345 IPR005478 Transketolase, bacterial-like LIT28_17345 IPR005475 Transketolase-like, pyrimidine-binding domain LIT28_17350 IPR019796 Glucose-6-phosphate dehydrogenase, active site LIT28_17350 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal LIT28_17350 IPR036291 NAD(P)-binding domain superfamily LIT28_17350 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding LIT28_17350 IPR001282 Glucose-6-phosphate dehydrogenase LIT28_17355 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal LIT28_17355 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding LIT28_17355 IPR019796 Glucose-6-phosphate dehydrogenase, active site LIT28_17355 IPR036291 NAD(P)-binding domain superfamily LIT28_17355 IPR001282 Glucose-6-phosphate dehydrogenase LIT28_17365 IPR011251 Luciferase-like domain LIT28_17365 IPR036661 Luciferase-like domain superfamily LIT28_17365 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase LIT28_17365 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related LIT28_17370 IPR009061 Putative DNA-binding domain superfamily LIT28_17370 IPR000551 MerR-type HTH domain LIT28_17375 IPR020807 Polyketide synthase, dehydratase domain LIT28_17375 IPR032821 Ketoacyl-synthetase, C-terminal extension LIT28_17375 IPR036291 NAD(P)-binding domain superfamily LIT28_17375 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LIT28_17375 IPR013968 Polyketide synthase, ketoreductase domain LIT28_17375 IPR020843 Polyketide synthase, enoylreductase domain LIT28_17375 IPR011032 GroES-like superfamily LIT28_17375 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_17375 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_17375 IPR009081 Phosphopantetheine binding ACP domain LIT28_17375 IPR006162 Phosphopantetheine attachment site LIT28_17375 IPR016039 Thiolase-like LIT28_17375 IPR014030 Beta-ketoacyl synthase, N-terminal LIT28_17375 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LIT28_17375 IPR014031 Beta-ketoacyl synthase, C-terminal LIT28_17375 IPR018201 Beta-ketoacyl synthase, active site LIT28_17375 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LIT28_17375 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding LIT28_17375 IPR042104 Polyketide synthase, dehydratase domain superfamily LIT28_17375 IPR001227 Acyl transferase domain superfamily LIT28_17375 IPR014043 Acyl transferase LIT28_17375 IPR036736 ACP-like superfamily LIT28_17385 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_17385 IPR036291 NAD(P)-binding domain superfamily LIT28_17390 IPR025711 PepSY domain LIT28_17390 IPR013856 Peptidase M4 domain LIT28_17390 IPR001570 Peptidase M4, C-terminal LIT28_17390 IPR027268 Peptidase M4/M1, CTD superfamily LIT28_17390 IPR023612 Peptidase M4 LIT28_17390 IPR011096 FTP domain LIT28_17400 IPR010708 5'(3')-deoxyribonucleotidase LIT28_17400 IPR036412 HAD-like superfamily LIT28_17400 IPR023214 HAD superfamily LIT28_17400 IPR009206 Nucleotidase, putative LIT28_17405 IPR024072 Dihydrofolate reductase-like domain superfamily LIT28_17405 IPR016193 Cytidine deaminase-like LIT28_17405 IPR016192 APOBEC/CMP deaminase, zinc-binding LIT28_17405 IPR002125 Cytidine and deoxycytidylate deaminase domain LIT28_17405 IPR011549 Riboflavin-specific deaminase, C-terminal LIT28_17405 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal LIT28_17405 IPR004794 Riboflavin biosynthesis protein RibD LIT28_17410 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LIT28_17410 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB LIT28_17410 IPR032677 GTP cyclohydrolase II LIT28_17410 IPR016299 Riboflavin biosynthesis protein RibBA LIT28_17410 IPR036144 RibA-like superfamily LIT28_17410 IPR000926 GTP cyclohydrolase II, RibA LIT28_17415 IPR002577 Helix-turn-helix, HxlR type LIT28_17415 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17415 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17430 IPR023210 NADP-dependent oxidoreductase domain LIT28_17430 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_17430 IPR020471 Aldo/keto reductase LIT28_17430 IPR018170 Aldo/keto reductase, conserved site LIT28_17435 IPR011701 Major facilitator superfamily LIT28_17435 IPR020846 Major facilitator superfamily domain LIT28_17435 IPR036259 MFS transporter superfamily LIT28_17445 IPR010371 Uncharacterised protein family UPF0303 LIT28_17445 IPR038084 GlcG-like domain superfamily LIT28_17445 IPR005624 Haem-degrading LIT28_17450 IPR022858 Metallothiol transferase FosB LIT28_17450 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_17450 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_17450 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_17455 IPR004694 Hydroxy amino acid transporter LIT28_17480 IPR023731 Regulatory protein Spx LIT28_17480 IPR006660 Arsenate reductase-like LIT28_17480 IPR006504 Transcriptional regulator Spx/MgsR LIT28_17480 IPR036249 Thioredoxin-like superfamily LIT28_17485 IPR002577 Helix-turn-helix, HxlR type LIT28_17485 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17485 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17490 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17490 IPR011663 UbiC transcription regulator-associated LIT28_17490 IPR000524 Transcription regulator HTH, GntR LIT28_17490 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LIT28_17490 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17495 IPR036291 NAD(P)-binding domain superfamily LIT28_17495 IPR000683 Oxidoreductase, N-terminal LIT28_17495 IPR004104 Oxidoreductase, C-terminal LIT28_17500 IPR003333 Mycolic acid cyclopropane synthase LIT28_17500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_17505 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17505 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17505 IPR002577 Helix-turn-helix, HxlR type LIT28_17510 IPR002577 Helix-turn-helix, HxlR type LIT28_17510 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17510 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17515 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_17515 IPR023210 NADP-dependent oxidoreductase domain LIT28_17525 IPR001279 Metallo-beta-lactamase LIT28_17525 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_17545 IPR003719 Phenazine biosynthesis PhzF protein LIT28_17555 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_17555 IPR036291 NAD(P)-binding domain superfamily LIT28_17555 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIT28_17555 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_17565 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_17565 IPR042099 AMP-dependent synthetase-like superfamily LIT28_17565 IPR020845 AMP-binding, conserved site LIT28_17565 IPR000873 AMP-dependent synthetase/ligase LIT28_17570 IPR029039 Flavoprotein-like superfamily LIT28_17570 IPR003680 Flavodoxin-like fold LIT28_17575 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17575 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17575 IPR002577 Helix-turn-helix, HxlR type LIT28_17580 IPR002938 FAD-binding domain LIT28_17580 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_17590 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17590 IPR011991 ArsR-like helix-turn-helix domain LIT28_17590 IPR001845 HTH ArsR-type DNA-binding domain LIT28_17590 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17595 IPR002509 NodB homology domain LIT28_17595 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_17600 IPR024449 Anti-sigma factor RsgI, N-terminal LIT28_17605 IPR007627 RNA polymerase sigma-70 region 2 LIT28_17605 IPR014244 RNA polymerase sigma-I type LIT28_17605 IPR013325 RNA polymerase sigma factor, region 2 LIT28_17610 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_17610 IPR001173 Glycosyltransferase 2-like LIT28_17610 IPR041038 TarS beta-glycosyltransferase C-terminal domain 1 LIT28_17620 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_17620 IPR009057 Homeobox-like domain superfamily LIT28_17620 IPR001647 DNA-binding HTH domain, TetR-type LIT28_17625 IPR004778 Homoserine/Threonine efflux protein LIT28_17625 IPR001123 Amino acid exporter protein, LeuE-type LIT28_17645 IPR008523 Protein of unknown function DUF805 LIT28_17650 IPR000412 ABC-2 transporter LIT28_17650 IPR013525 ABC-2 type transporter LIT28_17655 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_17655 IPR003593 AAA+ ATPase domain LIT28_17655 IPR025302 Domain of unknown function DUF4162 LIT28_17655 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA LIT28_17655 IPR017871 ABC transporter, conserved site LIT28_17655 IPR003439 ABC transporter-like LIT28_17675 IPR016099 Prismane-like, alpha/beta-sandwich LIT28_17675 IPR010048 Hydroxylamine reductase LIT28_17675 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase LIT28_17675 IPR011254 Prismane-like superfamily LIT28_17675 IPR016100 Prismane, alpha-bundle LIT28_17690 IPR012338 Beta-lactamase/transpeptidase-like LIT28_17690 IPR001586 Beta-lactamase, class-C active site LIT28_17690 IPR001466 Beta-lactamase-related LIT28_17700 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_17730 IPR001279 Metallo-beta-lactamase LIT28_17730 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_17745 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17745 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17745 IPR005149 Transcription regulator PadR, N-terminal LIT28_17750 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site LIT28_17750 IPR020843 Polyketide synthase, enoylreductase domain LIT28_17750 IPR036291 NAD(P)-binding domain superfamily LIT28_17750 IPR011032 GroES-like superfamily LIT28_17750 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 LIT28_17750 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_17750 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_17755 IPR004840 Amino acid permease, conserved site LIT28_17755 IPR004841 Amino acid permease/ SLC12A domain LIT28_17760 IPR005829 Sugar transporter, conserved site LIT28_17760 IPR036259 MFS transporter superfamily LIT28_17760 IPR020846 Major facilitator superfamily domain LIT28_17760 IPR011701 Major facilitator superfamily LIT28_17760 IPR004812 Drug resistance transporter Bcr/CmlA subfamily LIT28_17780 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_17780 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_17780 IPR036291 NAD(P)-binding domain superfamily LIT28_17785 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related LIT28_17785 IPR024078 Putative deacetylase LmbE-like domain superfamily LIT28_17785 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 LIT28_17790 IPR014934 Protein of unknown function DUF1806 LIT28_17790 IPR036492 Hypothetical protein YojF superfamily LIT28_17795 IPR004680 Citrate transporter-like domain LIT28_17795 IPR000802 Arsenical pump membrane protein, ArsB LIT28_17810 IPR002491 ABC transporter periplasmic binding domain LIT28_17815 IPR037294 ABC transporter, BtuC-like LIT28_17815 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_17820 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_17820 IPR037294 ABC transporter, BtuC-like LIT28_17825 IPR008535 Protein of unknown function DUF817 LIT28_17845 IPR021224 Protein of unknown function DUF2690 LIT28_17855 IPR002559 Transposase, IS4-like LIT28_17855 IPR012337 Ribonuclease H-like superfamily LIT28_17865 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17865 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17865 IPR000847 Transcription regulator HTH, LysR LIT28_17865 IPR005119 LysR, substrate-binding LIT28_17870 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_17870 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_17870 IPR011032 GroES-like superfamily LIT28_17870 IPR036291 NAD(P)-binding domain superfamily LIT28_17870 IPR020843 Polyketide synthase, enoylreductase domain LIT28_17890 IPR000432 DNA mismatch repair protein MutS, C-terminal LIT28_17890 IPR007696 DNA mismatch repair protein MutS, core LIT28_17890 IPR036187 DNA mismatch repair protein MutS, core domain superfamily LIT28_17890 IPR005747 Endonuclease MutS2 LIT28_17890 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_17890 IPR036063 Smr domain superfamily LIT28_17890 IPR002625 Smr domain LIT28_17905 IPR013776 Alpha-amylase, thermostable LIT28_17905 IPR017853 Glycoside hydrolase superfamily LIT28_17905 IPR013780 Glycosyl hydrolase, all-beta LIT28_17905 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LIT28_17905 IPR015237 Alpha-amylase C-terminal, prokaryotic LIT28_17910 IPR038765 Papain-like cysteine peptidase superfamily LIT28_17910 IPR001447 Arylamine N-acetyltransferase LIT28_17915 IPR013647 Oligopeptidase F, N-terminal domain LIT28_17915 IPR004438 Peptidase M3B, oligoendopeptidase F LIT28_17915 IPR001567 Peptidase M3A/M3B catalytic domain LIT28_17915 IPR042088 Oligoendopeptidase F, C-terminal domain LIT28_17920 IPR012338 Beta-lactamase/transpeptidase-like LIT28_17920 IPR001466 Beta-lactamase-related LIT28_17925 IPR011701 Major facilitator superfamily LIT28_17925 IPR036259 MFS transporter superfamily LIT28_17925 IPR020846 Major facilitator superfamily domain LIT28_17930 IPR005119 LysR, substrate-binding LIT28_17930 IPR000847 Transcription regulator HTH, LysR LIT28_17930 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17930 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17945 IPR030395 Glycerophosphodiester phosphodiesterase domain LIT28_17945 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LIT28_17980 IPR002938 FAD-binding domain LIT28_17980 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_17985 IPR001845 HTH ArsR-type DNA-binding domain LIT28_17985 IPR011991 ArsR-like helix-turn-helix domain LIT28_17985 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_17985 IPR036390 Winged helix DNA-binding domain superfamily LIT28_17990 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site LIT28_17990 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 LIT28_17990 IPR013149 Alcohol dehydrogenase, C-terminal LIT28_17990 IPR011032 GroES-like superfamily LIT28_17990 IPR020843 Polyketide synthase, enoylreductase domain LIT28_17990 IPR036291 NAD(P)-binding domain superfamily LIT28_17990 IPR013154 Alcohol dehydrogenase, N-terminal LIT28_17995 IPR003846 Protein adenylyltransferase SelO LIT28_18000 IPR040702 Response regulator aspartate phosphatase, N-terminal LIT28_18000 IPR013026 Tetratricopeptide repeat-containing domain LIT28_18000 IPR019734 Tetratricopeptide repeat LIT28_18000 IPR011990 Tetratricopeptide-like helical domain superfamily LIT28_18010 IPR012349 FMN-binding split barrel LIT28_18010 IPR007396 Transcriptional regulator PAI 2-type LIT28_18015 IPR000182 GNAT domain LIT28_18015 IPR007344 GrpB/Dephospho-CoA kinase LIT28_18015 IPR016181 Acyl-CoA N-acyltransferase LIT28_18025 IPR004710 Bile acid:sodium symporter LIT28_18025 IPR038770 Sodium/solute symporter superfamily LIT28_18025 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 LIT28_18030 IPR016164 FAD-linked oxidase-like, C-terminal LIT28_18030 IPR004490 Glycolate oxidase subunit GlcD LIT28_18030 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_18030 IPR004113 FAD-linked oxidase, C-terminal LIT28_18030 IPR016166 FAD-binding domain, PCMH-type LIT28_18030 IPR006094 FAD linked oxidase, N-terminal LIT28_18030 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 LIT28_18045 IPR009057 Homeobox-like domain superfamily LIT28_18045 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_18045 IPR001647 DNA-binding HTH domain, TetR-type LIT28_18050 IPR005831 Aerolysin/haemolysin toxin, conserved site LIT28_18050 IPR036435 Leukocidin/porin MspA superfamily LIT28_18050 IPR003963 Bi-component toxin, staphylococci LIT28_18050 IPR016183 Leukocidin/Hemolysin toxin LIT28_18055 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LIT28_18055 IPR001119 S-layer homology domain LIT28_18060 IPR001845 HTH ArsR-type DNA-binding domain LIT28_18060 IPR011991 ArsR-like helix-turn-helix domain LIT28_18060 IPR036390 Winged helix DNA-binding domain superfamily LIT28_18060 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_18075 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_18075 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_18075 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_18075 IPR005467 Histidine kinase domain LIT28_18075 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_18075 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_18075 IPR001610 PAC motif LIT28_18075 IPR000014 PAS domain LIT28_18075 IPR013767 PAS fold LIT28_18075 IPR035965 PAS domain superfamily LIT28_18075 IPR000700 PAS-associated, C-terminal LIT28_18080 IPR013783 Immunoglobulin-like fold LIT28_18080 IPR013661 Peptidase M9, collagenase, N-terminal domain LIT28_18080 IPR022409 PKD/Chitinase domain LIT28_18080 IPR002169 Peptidase M9A/M9B, collagenase, bacterial LIT28_18080 IPR000601 PKD domain LIT28_18080 IPR035986 PKD domain superfamily LIT28_18080 IPR041379 Collagenase ColG, catalytic helper subdomain LIT28_18085 IPR003416 MgtC/SapB/SrpB/YhiD family LIT28_18100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_18100 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_18100 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II LIT28_18100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_18105 IPR007391 Vancomycin resistance VanW LIT28_18115 IPR025012 Domain of unknown function DUF3898 LIT28_18115 IPR025006 Protein of unknown function DUF3900 LIT28_18130 IPR012156 Cold shock, CspA LIT28_18130 IPR011129 Cold shock domain LIT28_18130 IPR019844 Cold-shock (CSD) domain LIT28_18130 IPR002059 Cold-shock protein, DNA-binding LIT28_18130 IPR012340 Nucleic acid-binding, OB-fold LIT28_18135 IPR015943 WD40/YVTN repeat-like-containing domain superfamily LIT28_18140 IPR010087 Flavodoxin, short chain LIT28_18140 IPR001094 Flavodoxin-like LIT28_18140 IPR008254 Flavodoxin/nitric oxide synthase LIT28_18140 IPR029039 Flavoprotein-like superfamily LIT28_18150 IPR022927 RNA pyrophosphohydrolase RppH LIT28_18150 IPR020084 NUDIX hydrolase, conserved site LIT28_18150 IPR000086 NUDIX hydrolase domain LIT28_18150 IPR020476 NUDIX hydrolase LIT28_18150 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_18160 IPR001451 Hexapeptide repeat LIT28_18160 IPR018357 Hexapeptide transferase, conserved site LIT28_18160 IPR011004 Trimeric LpxA-like superfamily LIT28_18170 IPR036291 NAD(P)-binding domain superfamily LIT28_18170 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_18170 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_18180 IPR024083 Fumarase/histidase, N-terminal LIT28_18180 IPR009049 Argininosuccinate lyase LIT28_18180 IPR029419 Argininosuccinate lyase, C-terminal LIT28_18180 IPR022761 Fumarate lyase, N-terminal LIT28_18180 IPR008948 L-Aspartase-like LIT28_18180 IPR000362 Fumarate lyase family LIT28_18190 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LIT28_18190 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LIT28_18190 IPR022976 Non-specific ribonucleoside hydrolase RihC LIT28_18190 IPR036452 Ribonucleoside hydrolase-like LIT28_18195 IPR018212 Sodium/solute symporter, conserved site LIT28_18195 IPR001734 Sodium/solute symporter LIT28_18195 IPR011849 Sodium/pantothenate symporter LIT28_18195 IPR038377 Sodium/glucose symporter superfamily LIT28_18205 IPR015590 Aldehyde dehydrogenase domain LIT28_18205 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_18205 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_18205 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIT28_18205 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_18205 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent LIT28_18210 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_18210 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIT28_18210 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_18210 IPR036291 NAD(P)-binding domain superfamily LIT28_18215 IPR025435 YfhD-like protein LIT28_18220 IPR032696 Squalene cyclase, C-terminal LIT28_18220 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid LIT28_18220 IPR018333 Squalene cyclase LIT28_18220 IPR032697 Squalene cyclase, N-terminal LIT28_18225 IPR003832 Protein of unknown function DUF212 LIT28_18230 IPR004626 RarD protein LIT28_18230 IPR000620 EamA domain LIT28_18235 IPR010718 Protein of unknown function DUF1294 LIT28_18250 IPR019591 Mrp/NBP35 ATP-binding protein LIT28_18250 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 LIT28_18250 IPR000808 Mrp, conserved site LIT28_18250 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18260 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily LIT28_18260 IPR003448 Molybdopterin biosynthesis MoaE LIT28_18265 IPR005110 MoeA, N-terminal and linker domain LIT28_18265 IPR005111 MoeA, C-terminal, domain IV LIT28_18265 IPR038987 Molybdopterin biosynthesis protein MoeA-like LIT28_18265 IPR001453 MoaB/Mog domain LIT28_18265 IPR036135 MoeA, N-terminal and linker domain superfamily LIT28_18265 IPR036688 MoeA, C-terminal, domain IV superfamily LIT28_18265 IPR036425 MoaB/Mog-like domain superfamily LIT28_18270 IPR035985 Ubiquitin-activating enzyme LIT28_18270 IPR000594 THIF-type NAD/FAD binding fold LIT28_18275 IPR000292 Formate/nitrite transporter LIT28_18275 IPR023271 Aquaporin-like LIT28_18275 IPR024002 Formate/nitrite transporter, conserved site LIT28_18280 IPR013483 Molybdenum cofactor biosynthesis protein A LIT28_18280 IPR007197 Radical SAM LIT28_18280 IPR010505 Molybdenum cofactor synthesis C-terminal LIT28_18280 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site LIT28_18280 IPR006638 Elp3/MiaB/NifB LIT28_18280 IPR013785 Aldolase-type TIM barrel LIT28_18285 IPR016193 Cytidine deaminase-like LIT28_18285 IPR003786 Sulfur carrier protein FdhD LIT28_18290 IPR018745 Domain of unknown function DUF2294 LIT28_18295 IPR012440 Protein of unknown function DUF1641 LIT28_18300 IPR006656 Molybdopterin oxidoreductase LIT28_18300 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding LIT28_18300 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LIT28_18300 IPR006657 Molybdopterin dinucleotide-binding domain LIT28_18300 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIT28_18300 IPR041924 Formate dehydrogenase H, N-terminal LIT28_18300 IPR009010 Aspartate decarboxylase-like domain superfamily LIT28_18300 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIT28_18300 IPR036010 2Fe-2S ferredoxin-like superfamily LIT28_18300 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LIT28_18300 IPR006478 Formate dehydrogenase, alpha subunit LIT28_18335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_18335 IPR013216 Methyltransferase type 11 LIT28_18340 IPR000914 Solute-binding protein family 5 domain LIT28_18340 IPR023765 Solute-binding protein family 5, conserved site LIT28_18340 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_18340 IPR039424 Solute-binding protein family 5 LIT28_18345 IPR023765 Solute-binding protein family 5, conserved site LIT28_18345 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_18345 IPR039424 Solute-binding protein family 5 LIT28_18345 IPR000914 Solute-binding protein family 5 domain LIT28_18350 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_18350 IPR039424 Solute-binding protein family 5 LIT28_18350 IPR023765 Solute-binding protein family 5, conserved site LIT28_18350 IPR000914 Solute-binding protein family 5 domain LIT28_18360 IPR004474 Cell envelope-related transcriptional attenuator domain LIT28_18370 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_18370 IPR013325 RNA polymerase sigma factor, region 2 LIT28_18370 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LIT28_18370 IPR014294 RNA polymerase sigma-W, bacillaceae LIT28_18370 IPR014284 RNA polymerase sigma-70 like domain LIT28_18370 IPR039425 RNA polymerase sigma-70 like LIT28_18370 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_18370 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_18370 IPR007627 RNA polymerase sigma-70 region 2 LIT28_18375 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_18375 IPR004361 Glyoxalase I LIT28_18375 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_18375 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_18375 IPR018146 Glyoxalase I, conserved site LIT28_18385 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18385 IPR003593 AAA+ ATPase domain LIT28_18385 IPR003439 ABC transporter-like LIT28_18385 IPR025302 Domain of unknown function DUF4162 LIT28_18385 IPR017871 ABC transporter, conserved site LIT28_18395 IPR036291 NAD(P)-binding domain superfamily LIT28_18395 IPR000683 Oxidoreductase, N-terminal LIT28_18395 IPR004104 Oxidoreductase, C-terminal LIT28_18400 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LIT28_18400 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal LIT28_18400 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat LIT28_18400 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily LIT28_18400 IPR005741 DNA topoisomerase IV subunit A, Gram-positive LIT28_18400 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal LIT28_18400 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta LIT28_18405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_18405 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_18405 IPR002288 DNA gyrase B subunit, C-terminal LIT28_18405 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_18405 IPR001241 DNA topoisomerase, type IIA LIT28_18405 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LIT28_18405 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal LIT28_18405 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 LIT28_18405 IPR018522 DNA topoisomerase, type IIA, conserved site LIT28_18405 IPR006171 TOPRIM domain LIT28_18405 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_18405 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes LIT28_18410 IPR003781 CoA-binding LIT28_18410 IPR036291 NAD(P)-binding domain superfamily LIT28_18415 IPR001940 Peptidase S1C LIT28_18415 IPR001478 PDZ domain LIT28_18415 IPR036034 PDZ superfamily LIT28_18415 IPR009003 Peptidase S1, PA clan LIT28_18420 IPR001789 Signal transduction response regulator, receiver domain LIT28_18420 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_18420 IPR011006 CheY-like superfamily LIT28_18420 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_18420 IPR039420 Transcriptional regulatory protein WalR-like LIT28_18420 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_18425 IPR001989 Radical-activating enzyme, conserved site LIT28_18425 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic LIT28_18425 IPR034457 Organic radical-activating enzymes LIT28_18425 IPR013785 Aldolase-type TIM barrel LIT28_18430 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic LIT28_18430 IPR001150 Glycine radical domain LIT28_18430 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LIT28_18430 IPR005144 ATP-cone domain LIT28_18435 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY LIT28_18440 IPR008326 Uncharacterised conserved protein UCP034852 LIT28_18440 IPR035903 HesB-like domain superfamily LIT28_18440 IPR000361 FeS cluster biogenesis LIT28_18445 IPR006683 Thioesterase domain LIT28_18445 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family LIT28_18445 IPR029069 HotDog domain superfamily LIT28_18450 IPR036779 LysM domain superfamily LIT28_18450 IPR041704 CFLE, GH18 catalytic domain LIT28_18450 IPR011583 Chitinase II LIT28_18450 IPR029070 Chitinase insertion domain superfamily LIT28_18450 IPR001223 Glycoside hydrolase family 18, catalytic domain LIT28_18450 IPR017853 Glycoside hydrolase superfamily LIT28_18450 IPR018392 LysM domain LIT28_18455 IPR017524 Small acid-soluble spore protein, thioredoxin-like LIT28_18460 IPR012612 Small acid-soluble spore protein, SspN LIT28_18465 IPR025004 Transcriptional regulatory protein SenN/SenS LIT28_18470 IPR040982 DNA polymerase III alpha subunit finger domain LIT28_18470 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain LIT28_18470 IPR012337 Ribonuclease H-like superfamily LIT28_18470 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type LIT28_18470 IPR036397 Ribonuclease H superfamily LIT28_18470 IPR003141 Polymerase/histidinol phosphatase, N-terminal LIT28_18470 IPR004013 PHP domain LIT28_18470 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LIT28_18470 IPR012340 Nucleic acid-binding, OB-fold LIT28_18470 IPR013520 Exonuclease, RNase T/DNA polymerase III LIT28_18470 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain LIT28_18470 IPR029460 DNA polymerase, helix-hairpin-helix motif LIT28_18470 IPR024754 DNA polymerase III polC-like, N-terminal domain II LIT28_18475 IPR013766 Thioredoxin domain LIT28_18475 IPR036249 Thioredoxin-like superfamily LIT28_18475 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIT28_18485 IPR003593 AAA+ ATPase domain LIT28_18485 IPR039421 Type I protein exporter LIT28_18485 IPR039395 Peptidase C39-like A LIT28_18485 IPR005074 Peptidase C39, bacteriocin processing LIT28_18485 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18485 IPR017871 ABC transporter, conserved site LIT28_18485 IPR003439 ABC transporter-like LIT28_18485 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_18485 IPR011527 ABC transporter type 1, transmembrane domain LIT28_18485 IPR010132 ATPase, type I secretion system, HlyB LIT28_18490 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain LIT28_18490 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LIT28_18490 IPR006249 Aconitase/Iron-responsive element-binding protein 2 LIT28_18490 IPR018136 Aconitase family, 4Fe-4S cluster binding site LIT28_18490 IPR036008 Aconitase, iron-sulfur domain LIT28_18490 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain LIT28_18490 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 LIT28_18495 IPR012613 Small acid-soluble spore protein, SspO LIT28_18500 IPR014132 Sporulation polysaccharide deacetylase, PdaB LIT28_18500 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_18500 IPR002509 NodB homology domain LIT28_18510 IPR012614 Small acid-soluble spore protein, SspP LIT28_18520 IPR020846 Major facilitator superfamily domain LIT28_18520 IPR036259 MFS transporter superfamily LIT28_18520 IPR005829 Sugar transporter, conserved site LIT28_18520 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIT28_18520 IPR011701 Major facilitator superfamily LIT28_18530 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_18530 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LIT28_18530 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria LIT28_18530 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LIT28_18530 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal LIT28_18530 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily LIT28_18530 IPR002318 Alanine-tRNA ligase, class IIc LIT28_18530 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain LIT28_18530 IPR003156 DHHA1 domain LIT28_18535 IPR000086 NUDIX hydrolase domain LIT28_18535 IPR020084 NUDIX hydrolase, conserved site LIT28_18535 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_18535 IPR020476 NUDIX hydrolase LIT28_18535 IPR036412 HAD-like superfamily LIT28_18535 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_18535 IPR023214 HAD superfamily LIT28_18545 IPR016039 Thiolase-like LIT28_18545 IPR020617 Thiolase, C-terminal LIT28_18545 IPR020613 Thiolase, conserved site LIT28_18545 IPR020616 Thiolase, N-terminal LIT28_18545 IPR002155 Thiolase LIT28_18550 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_18550 IPR020845 AMP-binding, conserved site LIT28_18550 IPR000873 AMP-dependent synthetase/ligase LIT28_18550 IPR042099 AMP-dependent synthetase-like superfamily LIT28_18555 IPR003784 BioY protein LIT28_18560 IPR042099 AMP-dependent synthetase-like superfamily LIT28_18560 IPR000873 AMP-dependent synthetase/ligase LIT28_18560 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_18560 IPR020845 AMP-binding, conserved site LIT28_18570 IPR017871 ABC transporter, conserved site LIT28_18570 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18570 IPR003439 ABC transporter-like LIT28_18570 IPR003593 AAA+ ATPase domain LIT28_18575 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_18575 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_18590 IPR036629 YjbJ superfamily LIT28_18590 IPR008462 CsbD-like domain LIT28_18620 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_18620 IPR019264 Domain of unknown function DUF2179 LIT28_18620 IPR003740 Uncharacterised membrane protein YitT LIT28_18630 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_18630 IPR005467 Histidine kinase domain LIT28_18630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_18630 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_18630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_18630 IPR000014 PAS domain LIT28_18630 IPR035965 PAS domain superfamily LIT28_18630 IPR013767 PAS fold LIT28_18630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_18635 IPR029058 Alpha/Beta hydrolase fold LIT28_18635 IPR002925 Dienelactone hydrolase LIT28_18640 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_18640 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_18640 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_18645 IPR038377 Sodium/glucose symporter superfamily LIT28_18645 IPR011851 Sodium/proline symporter LIT28_18645 IPR001734 Sodium/solute symporter LIT28_18645 IPR018212 Sodium/solute symporter, conserved site LIT28_18650 IPR013785 Aldolase-type TIM barrel LIT28_18650 IPR024188 Glutamate synthase large subunit-like protein LIT28_18650 IPR002932 Glutamate synthase domain LIT28_18650 IPR027283 Glutamate synthase large subunit-like protein, bacteria LIT28_18655 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LIT28_18655 IPR013785 Aldolase-type TIM barrel LIT28_18660 IPR042215 CarD-like, C-terminal domain LIT28_18660 IPR003711 CarD-like/TRCF domain LIT28_18660 IPR036101 CarD-like/TRCF domain superfamily LIT28_18665 IPR020855 Ureohydrolase, manganese-binding site LIT28_18665 IPR005923 Formiminoglutamase LIT28_18665 IPR006035 Ureohydrolase LIT28_18665 IPR023696 Ureohydrolase domain superfamily LIT28_18670 IPR032466 Metal-dependent hydrolase LIT28_18670 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_18670 IPR006680 Amidohydrolase-related LIT28_18670 IPR005920 Imidazolonepropionase LIT28_18675 IPR023636 Urocanase conserved site LIT28_18675 IPR023637 Urocanase LIT28_18675 IPR035401 Urocanase, C-terminal domain LIT28_18675 IPR038364 Urocanase, central domain superfamily LIT28_18675 IPR035400 Urocanase, N-terminal domain LIT28_18675 IPR035085 Urocanase, Rossmann-like domain LIT28_18675 IPR036190 Urocanase superfamily LIT28_18680 IPR024083 Fumarase/histidase, N-terminal LIT28_18680 IPR001106 Aromatic amino acid lyase LIT28_18680 IPR005921 Histidine ammonia-lyase LIT28_18680 IPR022313 Phenylalanine/histidine ammonia-lyases, active site LIT28_18680 IPR008948 L-Aspartase-like LIT28_18685 IPR015111 Hut operon regulatory protein HutP LIT28_18685 IPR023552 Hut operon regulatory protein HutP, bacillales LIT28_18685 IPR036482 Hut operon regulatory protein HutP superfamily LIT28_18690 IPR023576 UbiE/COQ5 methyltransferase, conserved site LIT28_18690 IPR004033 UbiE/COQ5 methyltransferase LIT28_18690 IPR032904 2-phytyl-1,4-naphtoquinone methyltransferase MenG LIT28_18690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_18710 IPR020203 Uncharacterised protein family, YneK LIT28_18715 IPR031306 CcdC protein LIT28_18720 IPR003834 Cytochrome C biogenesis protein, transmembrane domain LIT28_18730 IPR017439 Amidohydrolase LIT28_18730 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_18730 IPR011650 Peptidase M20, dimerisation domain LIT28_18730 IPR002933 Peptidase M20 LIT28_18740 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18740 IPR017871 ABC transporter, conserved site LIT28_18740 IPR003439 ABC transporter-like LIT28_18740 IPR003593 AAA+ ATPase domain LIT28_18755 IPR036390 Winged helix DNA-binding domain superfamily LIT28_18755 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_18755 IPR000847 Transcription regulator HTH, LysR LIT28_18755 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain LIT28_18755 IPR005119 LysR, substrate-binding LIT28_18760 IPR005538 LrgA/CidA family LIT28_18760 IPR023760 Holin-like protein CidA LIT28_18765 IPR007300 CidB/LrgB family LIT28_18765 IPR005261 Conserved hypothetical protein CHP00659 LIT28_18770 IPR000086 NUDIX hydrolase domain LIT28_18770 IPR020084 NUDIX hydrolase, conserved site LIT28_18770 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_18770 IPR020476 NUDIX hydrolase LIT28_18770 IPR023214 HAD superfamily LIT28_18770 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_18770 IPR036412 HAD-like superfamily LIT28_18780 IPR002781 Transmembrane protein TauE-like LIT28_18790 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily LIT28_18790 IPR036366 PGBD superfamily LIT28_18790 IPR036365 PGBD-like superfamily LIT28_18790 IPR002477 Peptidoglycan binding-like LIT28_18790 IPR002502 N-acetylmuramoyl-L-alanine amidase domain LIT28_18805 IPR003593 AAA+ ATPase domain LIT28_18805 IPR039421 Type I protein exporter LIT28_18805 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18805 IPR003439 ABC transporter-like LIT28_18805 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_18805 IPR011527 ABC transporter type 1, transmembrane domain LIT28_18810 IPR039421 Type I protein exporter LIT28_18810 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18810 IPR017871 ABC transporter, conserved site LIT28_18810 IPR003439 ABC transporter-like LIT28_18810 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_18810 IPR011527 ABC transporter type 1, transmembrane domain LIT28_18810 IPR003593 AAA+ ATPase domain LIT28_18815 IPR005359 Protein with unknown function UPF0154 LIT28_18820 IPR019683 Sporulation inhibitor of replication protein SirA LIT28_18820 IPR038449 SirA superfamily LIT28_18825 IPR033247 Transketolase family LIT28_18825 IPR005478 Transketolase, bacterial-like LIT28_18825 IPR033248 Transketolase, C-terminal domain LIT28_18825 IPR005475 Transketolase-like, pyrimidine-binding domain LIT28_18825 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LIT28_18825 IPR029061 Thiamin diphosphate-binding fold LIT28_18825 IPR005474 Transketolase, N-terminal LIT28_18825 IPR020826 Transketolase binding site LIT28_18830 IPR005769 ABC transporter, permease PhnE/PtxC LIT28_18830 IPR035906 MetI-like superfamily LIT28_18830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_18835 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_18835 IPR035906 MetI-like superfamily LIT28_18835 IPR005769 ABC transporter, permease PhnE/PtxC LIT28_18840 IPR012693 ABC transporter, phosphonate import, PhnC LIT28_18840 IPR003593 AAA+ ATPase domain LIT28_18840 IPR003439 ABC transporter-like LIT28_18840 IPR017871 ABC transporter, conserved site LIT28_18840 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18850 IPR008334 5'-Nucleotidase, C-terminal LIT28_18850 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LIT28_18850 IPR006146 5'-Nucleotidase, conserved site LIT28_18850 IPR006179 5'-Nucleotidase/apyrase LIT28_18850 IPR041827 CpdB, N-terminal metallophosphatase domain LIT28_18850 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_18850 IPR019931 LPXTG cell wall anchor domain LIT28_18850 IPR029052 Metallo-dependent phosphatase-like LIT28_18855 IPR009242 Protein of unknown function DUF896 LIT28_18860 IPR006119 Resolvase, N-terminal catalytic domain LIT28_18860 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LIT28_18865 IPR036390 Winged helix DNA-binding domain superfamily LIT28_18865 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_18865 IPR006197 Peptidase S24, LexA-like LIT28_18865 IPR006199 LexA repressor, DNA-binding domain LIT28_18865 IPR039418 LexA-like LIT28_18865 IPR006200 Transcription regulator LexA LIT28_18865 IPR011991 ArsR-like helix-turn-helix domain LIT28_18865 IPR015927 Peptidase S24/S26A/S26B/S26C LIT28_18865 IPR036286 LexA/Signal peptidase-like superfamily LIT28_18880 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_18880 IPR005149 Transcription regulator PadR, N-terminal LIT28_18880 IPR036390 Winged helix DNA-binding domain superfamily LIT28_18885 IPR004809 Glutamine synthetase type I LIT28_18885 IPR008147 Glutamine synthetase, beta-Grasp domain LIT28_18885 IPR036651 Glutamine synthetase, N-terminal domain superfamily LIT28_18885 IPR027303 Glutamine synthetase, glycine-rich site LIT28_18885 IPR001637 Glutamine synthetase class-I, adenylation site LIT28_18885 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LIT28_18885 IPR027302 Glutamine synthetase, N-terminal conserved site LIT28_18885 IPR008146 Glutamine synthetase, catalytic domain LIT28_18890 IPR000551 MerR-type HTH domain LIT28_18890 IPR009061 Putative DNA-binding domain superfamily LIT28_18895 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_18895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_18895 IPR009651 Putative methionine gamma-lyase LIT28_18900 IPR030394 HflX-type guanine nucleotide-binding (G) domain LIT28_18900 IPR006073 GTP binding domain LIT28_18900 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18900 IPR016496 GTPase HflX LIT28_18900 IPR025121 GTPase HflX, N-terminal LIT28_18900 IPR042108 GTPase HflX, N-terminal domain superfamily LIT28_18900 IPR032305 GTP-binding protein, middle domain LIT28_18905 IPR005115 Uncharacterised domain UPF0126 LIT28_18910 IPR014232 Sporulation stage V, protein K LIT28_18910 IPR003593 AAA+ ATPase domain LIT28_18910 IPR041627 CbbX, AAA lid domain LIT28_18910 IPR003959 ATPase, AAA-type, core LIT28_18910 IPR000641 CbxX/CfxQ LIT28_18910 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18925 IPR005001 RNA-binding protein Hfq LIT28_18925 IPR010920 LSM domain superfamily LIT28_18930 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_18930 IPR018022 IPP transferase LIT28_18930 IPR039657 Dimethylallyltransferase LIT28_18940 IPR010611 3D domain LIT28_18940 IPR018392 LysM domain LIT28_18940 IPR036908 RlpA-like domain superfamily LIT28_18940 IPR036779 LysM domain superfamily LIT28_18945 IPR006327 Phosphotransferase system, fructose IIC component LIT28_18945 IPR003353 Phosphotransferase system, fructose-specific IIB subunit LIT28_18945 IPR004715 Phosphotransferase system, IIA component fructose subfamily LIT28_18945 IPR013014 Phosphotransferase system, EIIC component, type 2 LIT28_18945 IPR016152 Phosphotransferase/anion transporter LIT28_18945 IPR013011 Phosphotransferase system, EIIB component, type 2 LIT28_18945 IPR036095 PTS system IIB component-like superfamily LIT28_18945 IPR002178 PTS EIIA type-2 domain LIT28_18945 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LIT28_18950 IPR022463 Fructose 1-phosphate kinase LIT28_18950 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LIT28_18950 IPR011611 Carbohydrate kinase PfkB LIT28_18950 IPR029056 Ribokinase-like LIT28_18950 IPR017583 Tagatose/fructose phosphokinase LIT28_18955 IPR036390 Winged helix DNA-binding domain superfamily LIT28_18955 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LIT28_18955 IPR001034 DeoR-type HTH domain LIT28_18955 IPR037171 NagB/RpiA transferase-like LIT28_18955 IPR014036 DeoR C-terminal sensor domain LIT28_18960 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LIT28_18960 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LIT28_18965 IPR007352 Protein of unknown function DUF420 LIT28_18975 IPR004841 Amino acid permease/ SLC12A domain LIT28_18975 IPR004840 Amino acid permease, conserved site LIT28_18975 IPR011265 GABA permease LIT28_18980 IPR017853 Glycoside hydrolase superfamily LIT28_18980 IPR013783 Immunoglobulin-like fold LIT28_18980 IPR001579 Glycoside hydrolase, chitinase active site LIT28_18980 IPR001223 Glycoside hydrolase family 18, catalytic domain LIT28_18980 IPR003961 Fibronectin type III LIT28_18980 IPR036116 Fibronectin type III superfamily LIT28_18980 IPR036573 Carbohydrate-binding module superfamily 5/12 LIT28_18980 IPR003610 Carbohydrate-binding module family 5/12 LIT28_18980 IPR011583 Chitinase II LIT28_18990 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LIT28_18990 IPR029052 Metallo-dependent phosphatase-like LIT28_18990 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_18990 IPR006311 Twin-arginine translocation pathway, signal sequence LIT28_18995 IPR000292 Formate/nitrite transporter LIT28_18995 IPR023271 Aquaporin-like LIT28_18995 IPR024002 Formate/nitrite transporter, conserved site LIT28_19000 IPR000119 Histone-like DNA-binding protein LIT28_19000 IPR020816 Histone-like DNA-binding protein, conserved site LIT28_19000 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LIT28_19010 IPR018303 P-type ATPase, phosphorylation site LIT28_19010 IPR008250 P-type ATPase, A domain superfamily LIT28_19010 IPR023298 P-type ATPase, transmembrane domain superfamily LIT28_19010 IPR023299 P-type ATPase, cytoplasmic domain N LIT28_19010 IPR023214 HAD superfamily LIT28_19010 IPR036163 Heavy metal-associated domain superfamily LIT28_19010 IPR027256 P-type ATPase, subfamily IB LIT28_19010 IPR001757 P-type ATPase LIT28_19010 IPR006121 Heavy metal-associated domain, HMA LIT28_19010 IPR036412 HAD-like superfamily LIT28_19010 IPR006122 Heavy metal-associated domain, copper ion-binding LIT28_19010 IPR017969 Heavy-metal-associated, conserved site LIT28_19015 IPR036163 Heavy metal-associated domain superfamily LIT28_19015 IPR000428 Copper ion binding protein LIT28_19015 IPR017969 Heavy-metal-associated, conserved site LIT28_19015 IPR006122 Heavy metal-associated domain, copper ion-binding LIT28_19015 IPR006121 Heavy metal-associated domain, HMA LIT28_19020 IPR038390 Metal-sensitive transcriptional repressor superfamily LIT28_19020 IPR003735 Metal-sensitive transcriptional repressor LIT28_19030 IPR029058 Alpha/Beta hydrolase fold LIT28_19030 IPR000801 Putative esterase LIT28_19035 IPR003593 AAA+ ATPase domain LIT28_19035 IPR003439 ABC transporter-like LIT28_19035 IPR017871 ABC transporter, conserved site LIT28_19035 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19040 IPR037294 ABC transporter, BtuC-like LIT28_19040 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_19045 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_19045 IPR037294 ABC transporter, BtuC-like LIT28_19050 IPR002491 ABC transporter periplasmic binding domain LIT28_19055 IPR020848 AP endonuclease 1, conserved site LIT28_19055 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LIT28_19055 IPR005135 Endonuclease/exonuclease/phosphatase LIT28_19055 IPR004808 AP endonuclease 1 LIT28_19055 IPR020847 AP endonuclease 1, binding site LIT28_19060 IPR004026 Ada DNA repair, metal-binding LIT28_19060 IPR009057 Homeobox-like domain superfamily LIT28_19060 IPR035451 Ada-like domain superfamily LIT28_19060 IPR018060 DNA binding HTH domain, AraC-type LIT28_19060 IPR018062 HTH domain AraC-type, conserved site LIT28_19060 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA LIT28_19065 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site LIT28_19065 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding LIT28_19065 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain LIT28_19065 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain LIT28_19065 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily LIT28_19065 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_19070 IPR012904 8-oxoguanine DNA glycosylase, N-terminal LIT28_19070 IPR003265 HhH-GPD domain LIT28_19070 IPR011257 DNA glycosylase LIT28_19070 IPR000035 Alkylbase DNA glycosidase, conserved site LIT28_19075 IPR002933 Peptidase M20 LIT28_19075 IPR010161 Peptidase M20B, tripeptide aminopeptidase LIT28_19075 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LIT28_19075 IPR011650 Peptidase M20, dimerisation domain LIT28_19075 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_19080 IPR038750 Uncharacterized protein YczE/YyaS-like LIT28_19100 IPR000160 GGDEF domain LIT28_19100 IPR005330 MHYT domain LIT28_19100 IPR029787 Nucleotide cyclase LIT28_19100 IPR035919 EAL domain superfamily LIT28_19100 IPR035965 PAS domain superfamily LIT28_19100 IPR001633 EAL domain LIT28_19105 IPR007235 Glycosyl transferase, family 28, C-terminal LIT28_19105 IPR004276 Glycosyltransferase family 28, N-terminal domain LIT28_19105 IPR006009 N-acetylglucosaminyltransferase, MurG LIT28_19115 IPR036291 NAD(P)-binding domain superfamily LIT28_19115 IPR016040 NAD(P)-binding domain LIT28_19120 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain LIT28_19120 IPR036291 NAD(P)-binding domain superfamily LIT28_19120 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain LIT28_19135 IPR003719 Phenazine biosynthesis PhzF protein LIT28_19140 IPR019723 Uncharacterised protein, YfmQ LIT28_19145 IPR007300 CidB/LrgB family LIT28_19150 IPR005538 LrgA/CidA family LIT28_19150 IPR023760 Holin-like protein CidA LIT28_19155 IPR036390 Winged helix DNA-binding domain superfamily LIT28_19155 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_19155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_19155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_19155 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_19155 IPR000524 Transcription regulator HTH, GntR LIT28_19155 IPR004839 Aminotransferase, class I/classII LIT28_19160 IPR000089 Biotin/lipoyl attachment LIT28_19160 IPR011053 Single hybrid motif LIT28_19160 IPR029058 Alpha/Beta hydrolase fold LIT28_19160 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LIT28_19160 IPR000073 Alpha/beta hydrolase fold-1 LIT28_19165 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 LIT28_19165 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related LIT28_19165 IPR024078 Putative deacetylase LmbE-like domain superfamily LIT28_19180 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LIT28_19180 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain LIT28_19185 IPR000209 Peptidase S8/S53 domain LIT28_19185 IPR034202 Subtilisin Carlsberg-like catalytic domain LIT28_19185 IPR015500 Peptidase S8, subtilisin-related LIT28_19185 IPR022398 Peptidase S8, subtilisin, His-active site LIT28_19185 IPR023828 Peptidase S8, subtilisin, Ser-active site LIT28_19185 IPR036852 Peptidase S8/S53 domain superfamily LIT28_19185 IPR023827 Peptidase S8, subtilisin, Asp-active site LIT28_19190 IPR042047 Cell wall hydrolase SleB, domain 1 LIT28_19190 IPR011105 Cell wall hydrolase, SleB LIT28_19200 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIT28_19200 IPR000917 Sulfatase, N-terminal LIT28_19200 IPR012160 Lipoteichoic acid synthase-like LIT28_19205 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19205 IPR027094 Mitofusin family LIT28_19205 IPR030381 Dynamin-type guanine nucleotide-binding (G) domain LIT28_19205 IPR022812 Dynamin superfamily LIT28_19220 IPR013507 DNA mismatch repair protein, S5 domain 2-like LIT28_19220 IPR014762 DNA mismatch repair, conserved site LIT28_19220 IPR020667 DNA mismatch repair protein, MutL LIT28_19220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_19220 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms LIT28_19220 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_19220 IPR037198 MutL, C-terminal domain superfamily LIT28_19220 IPR042121 MutL, C-terminal domain, regulatory subdomain LIT28_19220 IPR014790 MutL, C-terminal, dimerisation LIT28_19220 IPR002099 DNA mismatch repair protein family, N-terminal LIT28_19220 IPR042120 MutL, C-terminal domain, dimerisation subdomain LIT28_19220 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_19225 IPR005748 DNA mismatch repair protein MutS LIT28_19225 IPR007695 DNA mismatch repair protein MutS-like, N-terminal LIT28_19225 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19225 IPR000432 DNA mismatch repair protein MutS, C-terminal LIT28_19225 IPR007860 DNA mismatch repair protein MutS, connector domain LIT28_19225 IPR007861 DNA mismatch repair protein MutS, clamp LIT28_19225 IPR007696 DNA mismatch repair protein MutS, core LIT28_19225 IPR016151 DNA mismatch repair protein MutS, N-terminal LIT28_19225 IPR036187 DNA mismatch repair protein MutS, core domain superfamily LIT28_19225 IPR017261 DNA mismatch repair protein MutS/MSH LIT28_19225 IPR036678 MutS, connector domain superfamily LIT28_19230 IPR018901 Spore coat protein CotE LIT28_19235 IPR016783 Biofilm formation YmcA LIT28_19235 IPR010368 Control of competence regulator ComK, YlbF/YmcA LIT28_19235 IPR023378 YheA/YmcA-like domain superfamily LIT28_19240 IPR002792 TRAM domain LIT28_19240 IPR023404 Radical SAM, alpha/beta horseshoe LIT28_19240 IPR007197 Radical SAM LIT28_19240 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB LIT28_19240 IPR038135 Methylthiotransferase, N-terminal domain superfamily LIT28_19240 IPR013848 Methylthiotransferase, N-terminal LIT28_19240 IPR020612 Methylthiotransferase, conserved site LIT28_19240 IPR005839 Methylthiotransferase LIT28_19240 IPR006638 Elp3/MiaB/NifB LIT28_19245 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LIT28_19245 IPR029061 Thiamin diphosphate-binding fold LIT28_19250 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain LIT28_19250 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LIT28_19250 IPR029061 Thiamin diphosphate-binding fold LIT28_19250 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal LIT28_19250 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II LIT28_19250 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain LIT28_19250 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit LIT28_19255 IPR032466 Metal-dependent hydrolase LIT28_19255 IPR008257 Peptidase M19 LIT28_19260 IPR007347 Sporulation stage V, protein S LIT28_19260 IPR036882 Alba-like domain superfamily LIT28_19265 IPR029052 Metallo-dependent phosphatase-like LIT28_19265 IPR005235 Metallophosphoesterase, YmdB-like LIT28_19270 IPR017705 Ribonuclease Y LIT28_19270 IPR036612 K Homology domain, type 1 superfamily LIT28_19270 IPR006674 HD domain LIT28_19270 IPR022711 Ribonuclease Y, N-terminal LIT28_19270 IPR004088 K Homology domain, type 1 LIT28_19270 IPR003607 HD/PDEase domain LIT28_19270 IPR004087 K Homology domain LIT28_19270 IPR006675 HDIG domain LIT28_19275 IPR003593 AAA+ ATPase domain LIT28_19275 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface LIT28_19275 IPR023400 DNA recombination and repair protein RecA, C-terminal LIT28_19275 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain LIT28_19275 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19275 IPR020584 DNA recombination/repair protein RecA, conserved site LIT28_19275 IPR013765 DNA recombination and repair protein RecA LIT28_19280 IPR001453 MoaB/Mog domain LIT28_19280 IPR036653 CinA-like, C-terminal LIT28_19280 IPR008136 CinA, C-terminal LIT28_19280 IPR008135 Competence-induced protein CinA LIT28_19280 IPR041424 CinA, KH domain LIT28_19280 IPR036425 MoaB/Mog-like domain superfamily LIT28_19285 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase LIT28_19285 IPR000462 CDP-alcohol phosphatidyltransferase LIT28_19290 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_19290 IPR025194 Domain of unknown function DUF4115 LIT28_19295 IPR024514 Domain of unknown function DUF3388 LIT28_19295 IPR016784 Uncharacterised protein UCP021288 with ACT domain LIT28_19295 IPR002912 ACT domain LIT28_19300 IPR021637 Protein of unknown function DUF3243 LIT28_19300 IPR024702 Uncharacterised conserved protein YmfJ LIT28_19300 IPR038292 YmfJ/YflH superfamily LIT28_19305 IPR036291 NAD(P)-binding domain superfamily LIT28_19305 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_19310 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LIT28_19310 IPR011765 Peptidase M16, N-terminal LIT28_19310 IPR007863 Peptidase M16, C-terminal LIT28_19315 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LIT28_19315 IPR007863 Peptidase M16, C-terminal LIT28_19320 IPR001851 ABC transporter, permease LIT28_19325 IPR002229 Blood group Rhesus C/E/D polypeptide LIT28_19325 IPR001851 ABC transporter, permease LIT28_19330 IPR017871 ABC transporter, conserved site LIT28_19330 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19330 IPR003439 ABC transporter-like LIT28_19330 IPR003593 AAA+ ATPase domain LIT28_19335 IPR003760 ABC transporter substrate-binding protein PnrA-like LIT28_19335 IPR028082 Periplasmic binding protein-like I LIT28_19340 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_19340 IPR036390 Winged helix DNA-binding domain superfamily LIT28_19340 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LIT28_19340 IPR011663 UbiC transcription regulator-associated LIT28_19340 IPR000524 Transcription regulator HTH, GntR LIT28_19345 IPR003593 AAA+ ATPase domain LIT28_19345 IPR041027 FtsK alpha domain LIT28_19345 IPR002543 FtsK domain LIT28_19345 IPR018541 FtsK gamma domain LIT28_19345 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19345 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_19345 IPR036390 Winged helix DNA-binding domain superfamily LIT28_19350 IPR025619 YlzJ-like protein LIT28_19355 IPR029045 ClpP/crotonase-like domain superfamily LIT28_19355 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LIT28_19365 IPR038965 Transposase InsF-like LIT28_19365 IPR036397 Ribonuclease H superfamily LIT28_19365 IPR012337 Ribonuclease H-like superfamily LIT28_19365 IPR001584 Integrase, catalytic core LIT28_19365 IPR025948 HTH-like domain LIT28_19370 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_19370 IPR041636 Ribonuclease J, C-terminal LIT28_19370 IPR030854 Ribonuclease J, bacteria LIT28_19370 IPR042173 Ribonuclease J, domain 2 LIT28_19370 IPR004613 Ribonuclease J LIT28_19370 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain LIT28_19370 IPR001279 Metallo-beta-lactamase LIT28_19375 IPR020625 Schiff base-forming aldolase, active site LIT28_19375 IPR002220 DapA-like LIT28_19375 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA LIT28_19375 IPR013785 Aldolase-type TIM barrel LIT28_19375 IPR020624 Schiff base-forming aldolase, conserved site LIT28_19380 IPR027795 CASTOR, ACT domain LIT28_19380 IPR036393 Acetylglutamate kinase-like superfamily LIT28_19380 IPR002912 ACT domain LIT28_19380 IPR001048 Aspartate/glutamate/uridylate kinase LIT28_19380 IPR005260 Aspartate kinase, monofunctional class LIT28_19380 IPR001341 Aspartate kinase LIT28_19380 IPR018042 Aspartate kinase, conserved site LIT28_19385 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site LIT28_19385 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type LIT28_19385 IPR012080 Aspartate-semialdehyde dehydrogenase LIT28_19385 IPR000534 Semialdehyde dehydrogenase, NAD-binding LIT28_19385 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LIT28_19385 IPR036291 NAD(P)-binding domain superfamily LIT28_19390 IPR014214 Dipicolinic acid synthetase, subunit B LIT28_19390 IPR036551 Flavin prenyltransferase-like LIT28_19390 IPR003382 Flavoprotein LIT28_19395 IPR036291 NAD(P)-binding domain superfamily LIT28_19395 IPR031629 Dipicolinate synthase subunit A, N-terminal LIT28_19395 IPR014215 Dipicolinic acid synthetase subunit A LIT28_19395 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LIT28_19400 IPR027275 PRC-barrel domain LIT28_19400 IPR011033 PRC-barrel-like superfamily LIT28_19400 IPR014238 Sporulation protein YlmC/YmxH LIT28_19405 IPR001431 Peptidase M16, zinc-binding site LIT28_19405 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LIT28_19405 IPR011765 Peptidase M16, N-terminal LIT28_19405 IPR007863 Peptidase M16, C-terminal LIT28_19410 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_19410 IPR010916 TonB box, conserved site LIT28_19410 IPR002509 NodB homology domain LIT28_19410 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY LIT28_19415 IPR027408 PNPase/RNase PH domain superfamily LIT28_19415 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain LIT28_19415 IPR015847 Exoribonuclease, phosphorolytic domain 2 LIT28_19415 IPR036345 Exoribonuclease, PH domain 2 superfamily LIT28_19415 IPR004087 K Homology domain LIT28_19415 IPR004088 K Homology domain, type 1 LIT28_19415 IPR036612 K Homology domain, type 1 superfamily LIT28_19415 IPR012340 Nucleic acid-binding, OB-fold LIT28_19415 IPR012162 Polyribonucleotide nucleotidyltransferase LIT28_19415 IPR001247 Exoribonuclease, phosphorolytic domain 1 LIT28_19415 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_19415 IPR022967 RNA-binding domain, S1 LIT28_19415 IPR003029 S1 domain LIT28_19420 IPR005290 Ribosomal protein S15, bacterial-type LIT28_19420 IPR009068 S15/NS1, RNA-binding LIT28_19420 IPR000589 Ribosomal protein S15 LIT28_19425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_19425 IPR023465 Riboflavin kinase domain superfamily LIT28_19425 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic LIT28_19425 IPR004821 Cytidyltransferase-like domain LIT28_19425 IPR023468 Riboflavin kinase LIT28_19425 IPR015864 FAD synthetase LIT28_19425 IPR002606 Riboflavin kinase, bacterial LIT28_19430 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_19430 IPR002501 Pseudouridine synthase II, N-terminal LIT28_19430 IPR014780 tRNA pseudouridine synthase II, TruB LIT28_19430 IPR032819 tRNA pseudouridylate synthase B, C-terminal LIT28_19435 IPR023799 Ribosome-binding factor A domain superfamily LIT28_19435 IPR015946 K homology domain-like, alpha/beta LIT28_19435 IPR000238 Ribosome-binding factor A LIT28_19435 IPR020053 Ribosome-binding factor A, conserved site LIT28_19440 IPR036746 TT1725-like superfamily LIT28_19440 IPR007546 Protein of unknown function DUF503 LIT28_19445 IPR023115 Translation initiation factor IF- 2, domain 3 LIT28_19445 IPR015760 Translation initiation factor IF- 2 LIT28_19445 IPR000178 Translation initiation factor aIF-2, bacterial-like LIT28_19445 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_19445 IPR000795 Transcription factor, GTP-binding domain LIT28_19445 IPR036925 Translation initiation factor IF-2, domain 3 superfamily LIT28_19445 IPR006847 Translation initiation factor IF-2, N-terminal LIT28_19445 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19445 IPR005225 Small GTP-binding protein domain LIT28_19450 IPR039109 Ribosomal protein L30/YlxQ LIT28_19450 IPR029064 50S ribosomal protein L30e-like LIT28_19450 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 LIT28_19450 IPR004037 Ribosomal protein L7Ae conserved site LIT28_19450 IPR039107 Ribosomal protein YlxQ LIT28_19455 IPR007393 Domain of unknown function DUF448 LIT28_19455 IPR037465 Uncharacterized protein YlxR LIT28_19455 IPR035931 YlxR-like superfamily LIT28_19460 IPR010213 Transcription termination factor NusA LIT28_19460 IPR015946 K homology domain-like, alpha/beta LIT28_19460 IPR009019 K homology domain superfamily, prokaryotic type LIT28_19460 IPR012340 Nucleic acid-binding, OB-fold LIT28_19460 IPR030842 Transcription termination/antitermination protein NusA, bacterial LIT28_19460 IPR036555 NusA, N-terminal domain superfamily LIT28_19460 IPR022967 RNA-binding domain, S1 LIT28_19460 IPR003029 S1 domain LIT28_19460 IPR013735 Transcription factor NusA, N-terminal LIT28_19460 IPR004087 K Homology domain LIT28_19460 IPR025249 KH domain, NusA-like LIT28_19465 IPR035956 RimP, N-terminal domain superfamily LIT28_19465 IPR003728 Ribosome maturation factor RimP LIT28_19465 IPR028998 Ribosome maturation factor RimP, C-terminal LIT28_19465 IPR028989 Ribosome maturation factor RimP, N-terminal LIT28_19465 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily LIT28_19470 IPR003141 Polymerase/histidinol phosphatase, N-terminal LIT28_19470 IPR036397 Ribonuclease H superfamily LIT28_19470 IPR012337 Ribonuclease H-like superfamily LIT28_19470 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type LIT28_19470 IPR004013 PHP domain LIT28_19470 IPR012340 Nucleic acid-binding, OB-fold LIT28_19470 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain LIT28_19470 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain LIT28_19470 IPR029460 DNA polymerase, helix-hairpin-helix motif LIT28_19470 IPR028112 DNA polymerase III polC-type, N-terminal domain I LIT28_19470 IPR024754 DNA polymerase III polC-like, N-terminal domain II LIT28_19470 IPR040982 DNA polymerase III alpha subunit finger domain LIT28_19470 IPR013520 Exonuclease, RNase T/DNA polymerase III LIT28_19475 IPR004154 Anticodon-binding LIT28_19475 IPR036621 Anticodon-binding domain superfamily LIT28_19475 IPR002316 Proline-tRNA ligase, class IIa LIT28_19475 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIT28_19475 IPR033730 Prokaryote proline-tRNA ligase core domain LIT28_19475 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 LIT28_19475 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily LIT28_19475 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain LIT28_19475 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_19475 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type LIT28_19480 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase LIT28_19480 IPR008915 Peptidase M50 LIT28_19480 IPR001478 PDZ domain LIT28_19480 IPR041489 PDZ domain 6 LIT28_19480 IPR036034 PDZ superfamily LIT28_19485 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase LIT28_19485 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal LIT28_19485 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal LIT28_19485 IPR026877 DXP reductoisomerase C-terminal domain LIT28_19485 IPR036169 DXP reductoisomerase, C-terminal domain superfamily LIT28_19485 IPR036291 NAD(P)-binding domain superfamily LIT28_19490 IPR000374 Phosphatidate cytidylyltransferase LIT28_19495 IPR001441 Decaprenyl diphosphate synthase-like LIT28_19495 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site LIT28_19495 IPR036424 Decaprenyl diphosphate synthase-like superfamily LIT28_19500 IPR002661 Ribosome recycling factor LIT28_19500 IPR023584 Ribosome recycling factor domain LIT28_19500 IPR036191 RRF superfamily LIT28_19505 IPR015963 Uridylate kinase, bacteria LIT28_19505 IPR011817 Uridylate kinase LIT28_19505 IPR036393 Acetylglutamate kinase-like superfamily LIT28_19505 IPR001048 Aspartate/glutamate/uridylate kinase LIT28_19510 IPR036402 Elongation factor Ts, dimerisation domain superfamily LIT28_19510 IPR001816 Translation elongation factor EFTs/EF1B LIT28_19510 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation LIT28_19510 IPR018101 Translation elongation factor Ts, conserved site LIT28_19510 IPR009060 UBA-like superfamily LIT28_19515 IPR001865 Ribosomal protein S2 LIT28_19515 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid LIT28_19515 IPR018130 Ribosomal protein S2, conserved site LIT28_19515 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily LIT28_19520 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_19520 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal LIT28_19520 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal LIT28_19520 IPR036390 Winged helix DNA-binding domain superfamily LIT28_19520 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY LIT28_19520 IPR029016 GAF-like domain superfamily LIT28_19525 IPR019489 Clp ATPase, C-terminal LIT28_19525 IPR004491 Heat shock protein HslU LIT28_19525 IPR003959 ATPase, AAA-type, core LIT28_19525 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19525 IPR003593 AAA+ ATPase domain LIT28_19530 IPR029055 Nucleophile aminohydrolases, N-terminal LIT28_19530 IPR023333 Proteasome B-type subunit LIT28_19530 IPR001353 Proteasome, subunit alpha/beta LIT28_19530 IPR022281 ATP-dependent protease, HslV subunit LIT28_19535 IPR010998 Integrase/recombinase, N-terminal LIT28_19535 IPR002104 Integrase, catalytic domain LIT28_19535 IPR004107 Integrase, SAM-like, N-terminal LIT28_19535 IPR011931 Tyrosine recombinase XerC LIT28_19535 IPR023009 Tyrosine recombinase XerC/XerD LIT28_19535 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_19535 IPR013762 Integrase-like, catalytic domain superfamily LIT28_19540 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_19540 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related LIT28_19540 IPR020595 MnmG-related, conserved site LIT28_19540 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO LIT28_19545 IPR013498 DNA topoisomerase, type IA, zn finger LIT28_19545 IPR003602 DNA topoisomerase, type IA, DNA-binding domain LIT28_19545 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LIT28_19545 IPR028612 DNA topoisomerase I, type IA LIT28_19545 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LIT28_19545 IPR013497 DNA topoisomerase, type IA, central LIT28_19545 IPR005733 DNA topoisomerase I, bacterial-type LIT28_19545 IPR003601 DNA topoisomerase, type IA, domain 2 LIT28_19545 IPR000380 DNA topoisomerase, type IA LIT28_19545 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LIT28_19545 IPR023406 DNA topoisomerase, type IA, active site LIT28_19545 IPR023405 DNA topoisomerase, type IA, core domain LIT28_19545 IPR034149 DNA topoisomerase 1, TOPRIM domain LIT28_19545 IPR006171 TOPRIM domain LIT28_19550 IPR003488 DNA recombination-mediator protein A LIT28_19555 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site LIT28_19555 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site LIT28_19555 IPR003781 CoA-binding LIT28_19555 IPR005810 Succinyl-CoA ligase, alpha subunit LIT28_19555 IPR005811 ATP-citrate lyase/succinyl-CoA ligase LIT28_19555 IPR036291 NAD(P)-binding domain superfamily LIT28_19555 IPR016102 Succinyl-CoA synthetase-like LIT28_19560 IPR016102 Succinyl-CoA synthetase-like LIT28_19560 IPR005809 Succinate--CoA synthetase, beta subunit LIT28_19560 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type LIT28_19560 IPR013815 ATP-grasp fold, subdomain 1 LIT28_19560 IPR011761 ATP-grasp fold LIT28_19560 IPR005811 ATP-citrate lyase/succinyl-CoA ligase LIT28_19565 IPR022898 Ribonuclease HII LIT28_19565 IPR001352 Ribonuclease HII/HIII LIT28_19565 IPR036397 Ribonuclease H superfamily LIT28_19565 IPR012337 Ribonuclease H-like superfamily LIT28_19565 IPR024567 Ribonuclease HII/HIII domain LIT28_19570 IPR019991 GTP-binding protein, ribosome biogenesis LIT28_19570 IPR006073 GTP binding domain LIT28_19570 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19570 IPR016478 GTPase, MTG1 LIT28_19570 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily LIT28_19570 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain LIT28_19575 IPR036286 LexA/Signal peptidase-like superfamily LIT28_19575 IPR019758 Peptidase S26A, signal peptidase I, conserved site LIT28_19575 IPR019757 Peptidase S26A, signal peptidase I, lysine active site LIT28_19575 IPR019756 Peptidase S26A, signal peptidase I, serine active site LIT28_19575 IPR019533 Peptidase S26 LIT28_19575 IPR000223 Peptidase S26A, signal peptidase I LIT28_19580 IPR008991 Translation protein SH3-like domain superfamily LIT28_19580 IPR018257 Ribosomal protein L19, conserved site LIT28_19580 IPR001857 Ribosomal protein L19 LIT28_19580 IPR038657 Ribosomal protein L19 superfamily LIT28_19585 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain LIT28_19585 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria LIT28_19585 IPR029028 Alpha/beta knot methyltransferases LIT28_19585 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal LIT28_19585 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIT28_19590 IPR002676 RimM, N-terminal LIT28_19590 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_19590 IPR036976 RimM, N-terminal domain superfamily LIT28_19590 IPR011033 PRC-barrel-like superfamily LIT28_19590 IPR027275 PRC-barrel domain LIT28_19590 IPR011961 16S rRNA processing protein RimM LIT28_19595 IPR009019 K homology domain superfamily, prokaryotic type LIT28_19595 IPR015946 K homology domain-like, alpha/beta LIT28_19595 IPR020627 Uncharacterised protein family UPF0109 LIT28_19600 IPR023803 Ribosomal protein S16 domain superfamily LIT28_19600 IPR000307 Ribosomal protein S16 LIT28_19600 IPR020592 Ribosomal protein S16, conserved site LIT28_19605 IPR013822 Signal recognition particle SRP54, helical bundle LIT28_19605 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LIT28_19605 IPR022941 Signal recognition particle, SRP54 subunit LIT28_19605 IPR003593 AAA+ ATPase domain LIT28_19605 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily LIT28_19605 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19605 IPR004125 Signal recognition particle, SRP54 subunit, M-domain LIT28_19605 IPR004780 Signal recognition particle protein LIT28_19605 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily LIT28_19610 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like LIT28_19610 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_19610 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_19615 IPR003593 AAA+ ATPase domain LIT28_19615 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19615 IPR013822 Signal recognition particle SRP54, helical bundle LIT28_19615 IPR004390 Signal-recognition particle receptor FtsY LIT28_19615 IPR036225 SRP/SRP receptor, N-terminal LIT28_19615 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LIT28_19615 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily LIT28_19620 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19620 IPR003395 RecF/RecN/SMC, N-terminal LIT28_19620 IPR024704 Structural maintenance of chromosomes protein LIT28_19620 IPR010935 SMCs flexible hinge LIT28_19620 IPR036277 SMCs flexible hinge superfamily LIT28_19620 IPR011890 Structural maintenance of chromosomes protein, prokaryotic LIT28_19625 IPR014720 Double-stranded RNA-binding domain LIT28_19625 IPR011907 Ribonuclease III LIT28_19625 IPR000999 Ribonuclease III domain LIT28_19625 IPR036389 Ribonuclease III, endonuclease domain superfamily LIT28_19630 IPR003231 Acyl carrier protein (ACP) LIT28_19630 IPR006162 Phosphopantetheine attachment site LIT28_19630 IPR009081 Phosphopantetheine binding ACP domain LIT28_19630 IPR036736 ACP-like superfamily LIT28_19635 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_19635 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIT28_19635 IPR036291 NAD(P)-binding domain superfamily LIT28_19640 IPR001227 Acyl transferase domain superfamily LIT28_19640 IPR014043 Acyl transferase LIT28_19640 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LIT28_19640 IPR024925 Malonyl CoA-acyl carrier protein transacylase LIT28_19640 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding LIT28_19640 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type LIT28_19645 IPR003664 Fatty acid synthesis PlsX protein LIT28_19645 IPR012281 Phospholipid biosynthesis protein, PlsX-like LIT28_19650 IPR006683 Thioesterase domain LIT28_19650 IPR029069 HotDog domain superfamily LIT28_19650 IPR036390 Winged helix DNA-binding domain superfamily LIT28_19650 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_19650 IPR017275 Transcription factor FapR LIT28_19655 IPR001650 Helicase, C-terminal LIT28_19655 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_19655 IPR011545 DEAD/DEAH box helicase domain LIT28_19655 IPR004609 ATP-dependent DNA helicase RecG LIT28_19655 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19655 IPR033454 RecG, wedge domain LIT28_19655 IPR012340 Nucleic acid-binding, OB-fold LIT28_19660 IPR019986 DAK2 domain-containing protein YloV LIT28_19660 IPR004007 DhaL domain LIT28_19660 IPR036117 DhaL domain superfamily LIT28_19660 IPR033470 Uncharacterised protein, DhaK domain LIT28_19665 IPR005531 Alkaline shock protein Asp23 LIT28_19670 IPR026569 Ribosomal protein L28/L24 LIT28_19670 IPR037147 Ribosomal protein L28/L24 superfamily LIT28_19670 IPR001383 Ribosomal protein L28 LIT28_19670 IPR034704 L28p-like LIT28_19675 IPR012609 Sporulation stage V, protein M LIT28_19680 IPR006282 Thiamin pyrophosphokinase LIT28_19680 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain LIT28_19680 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily LIT28_19680 IPR007371 Thiamin pyrophosphokinase, catalytic domain LIT28_19680 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily LIT28_19685 IPR013785 Aldolase-type TIM barrel LIT28_19685 IPR026019 Ribulose-phosphate 3-epimerase LIT28_19685 IPR000056 Ribulose-phosphate 3-epimerase-like LIT28_19685 IPR011060 Ribulose-phosphate binding barrel LIT28_19690 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain LIT28_19690 IPR012340 Nucleic acid-binding, OB-fold LIT28_19690 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19690 IPR004881 Ribosome biogenesis GTPase RsgA LIT28_19690 IPR010914 RsgA GTPase domain LIT28_19690 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal LIT28_19695 IPR011009 Protein kinase-like domain superfamily LIT28_19695 IPR000719 Protein kinase domain LIT28_19695 IPR017441 Protein kinase, ATP binding site LIT28_19695 IPR008271 Serine/threonine-protein kinase, active site LIT28_19695 IPR005543 PASTA domain LIT28_19700 IPR036457 PPM-type phosphatase domain superfamily LIT28_19700 IPR015655 Protein phosphatase 2C family LIT28_19700 IPR001932 PPM-type phosphatase domain LIT28_19705 IPR013785 Aldolase-type TIM barrel LIT28_19705 IPR027492 Dual-specificity RNA methyltransferase RlmN LIT28_19705 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr LIT28_19705 IPR007197 Radical SAM LIT28_19705 IPR040072 Methyltransferase (Class A) LIT28_19710 IPR004573 rRNA small subunit methyltransferase B LIT28_19710 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site LIT28_19710 IPR035926 NusB-like superfamily LIT28_19710 IPR006027 NusB/RsmB/TIM44 LIT28_19710 IPR023267 RNA (C5-cytosine) methyltransferase LIT28_19710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_19710 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type LIT28_19715 IPR037022 Formyl transferase, C-terminal domain superfamily LIT28_19715 IPR011034 Formyl transferase-like, C-terminal domain superfamily LIT28_19715 IPR005794 Methionyl-tRNA formyltransferase LIT28_19715 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain LIT28_19715 IPR001555 Phosphoribosylglycinamide formyltransferase, active site LIT28_19715 IPR005793 Formyl transferase, C-terminal LIT28_19715 IPR036477 Formyl transferase, N-terminal domain superfamily LIT28_19715 IPR002376 Formyl transferase, N-terminal LIT28_19720 IPR036821 Peptide deformylase superfamily LIT28_19720 IPR023635 Peptide deformylase LIT28_19725 IPR041236 Primosomal protein N, C-terminal domain LIT28_19725 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily LIT28_19725 IPR041222 Primosomal protein N', 3' DNA-binding domain LIT28_19725 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19725 IPR006935 Helicase/UvrB, N-terminal LIT28_19725 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_19725 IPR001650 Helicase, C-terminal LIT28_19725 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain LIT28_19725 IPR005259 Primosomal protein N' LIT28_19730 IPR036551 Flavin prenyltransferase-like LIT28_19730 IPR003382 Flavoprotein LIT28_19730 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal LIT28_19730 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC LIT28_19730 IPR035929 CoaB-like superfamily LIT28_19735 IPR036161 RPB6/omega subunit-like superfamily LIT28_19735 IPR012293 RNA polymerase subunit, RPB6/omega LIT28_19735 IPR006110 RNA polymerase, subunit omega/K/RPB6 LIT28_19735 IPR003716 DNA-directed RNA polymerase, omega subunit LIT28_19740 IPR017665 Guanylate kinase LIT28_19740 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_19740 IPR008144 Guanylate kinase-like domain LIT28_19740 IPR020590 Guanylate kinase, conserved site LIT28_19740 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LIT28_19745 IPR007169 Extracellular matrix regulatory protein A LIT28_19750 IPR005229 Conserved hypothetical protein CHP00255 LIT28_19750 IPR013551 Domain of unknown function DUF1732 LIT28_19750 IPR013527 YicC-like, N-terminal LIT28_19755 IPR004014 Cation-transporting P-type ATPase, N-terminal LIT28_19755 IPR018303 P-type ATPase, phosphorylation site LIT28_19755 IPR001757 P-type ATPase LIT28_19755 IPR005782 P-type ATPase, subfamily IIA, SERCA-type LIT28_19755 IPR023214 HAD superfamily LIT28_19755 IPR036412 HAD-like superfamily LIT28_19755 IPR008250 P-type ATPase, A domain superfamily LIT28_19755 IPR023298 P-type ATPase, transmembrane domain superfamily LIT28_19755 IPR023299 P-type ATPase, cytoplasmic domain N LIT28_19755 IPR006068 Cation-transporting P-type ATPase, C-terminal LIT28_19760 IPR008532 NFACT, RNA-binding domain LIT28_19765 IPR000587 Creatinase, N-terminal LIT28_19765 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LIT28_19765 IPR001714 Peptidase M24, methionine aminopeptidase LIT28_19765 IPR000994 Peptidase M24 LIT28_19765 IPR036005 Creatinase/aminopeptidase-like LIT28_19765 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LIT28_19800 IPR000836 Phosphoribosyltransferase domain LIT28_19800 IPR004467 Orotate phosphoribosyl transferase domain LIT28_19800 IPR023031 Orotate phosphoribosyltransferase LIT28_19800 IPR029057 Phosphoribosyltransferase-like LIT28_19805 IPR001754 Orotidine 5'-phosphate decarboxylase domain LIT28_19805 IPR018089 Orotidine 5'-phosphate decarboxylase, active site LIT28_19805 IPR014732 Orotidine 5'-phosphate decarboxylase LIT28_19805 IPR013785 Aldolase-type TIM barrel LIT28_19805 IPR011060 Ribulose-phosphate binding barrel LIT28_19810 IPR013785 Aldolase-type TIM barrel LIT28_19810 IPR033888 Dihydroorotate dehydrogenase, class 1B LIT28_19810 IPR005720 Dihydroorotate dehydrogenase domain LIT28_19810 IPR024920 Dihydroorotate dehydrogenase, class 1 LIT28_19810 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 LIT28_19810 IPR001295 Dihydroorotate dehydrogenase, conserved site LIT28_19815 IPR017938 Riboflavin synthase-like beta-barrel LIT28_19815 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit LIT28_19815 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily LIT28_19815 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain LIT28_19815 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit LIT28_19815 IPR000951 Phthalate dioxygenase reductase LIT28_19815 IPR017927 FAD-binding domain, ferredoxin reductase-type LIT28_19815 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIT28_19820 IPR036914 Methylglyoxal synthase-like domain superfamily LIT28_19820 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily LIT28_19820 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain LIT28_19820 IPR006275 Carbamoyl-phosphate synthase, large subunit LIT28_19820 IPR011761 ATP-grasp fold LIT28_19820 IPR011607 Methylglyoxal synthase-like domain LIT28_19820 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain LIT28_19820 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LIT28_19820 IPR016185 Pre-ATP-grasp domain superfamily LIT28_19820 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain LIT28_19825 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain LIT28_19825 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily LIT28_19825 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain LIT28_19825 IPR006274 Carbamoyl-phosphate synthase, small subunit LIT28_19825 IPR017926 Glutamine amidotransferase LIT28_19825 IPR029062 Class I glutamine amidotransferase-like LIT28_19830 IPR006680 Amidohydrolase-related LIT28_19830 IPR004722 Dihydroorotase LIT28_19830 IPR032466 Metal-dependent hydrolase LIT28_19830 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_19830 IPR002195 Dihydroorotase, conserved site LIT28_19835 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LIT28_19835 IPR006130 Aspartate/ornithine carbamoyltransferase LIT28_19835 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LIT28_19835 IPR002082 Aspartate carbamoyltransferase LIT28_19835 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LIT28_19840 IPR006042 Xanthine/uracil permease LIT28_19840 IPR006043 Xanthine/uracil/vitamin C permease LIT28_19840 IPR029935 Uracil permease LIT28_19845 IPR023050 Bifunctional protein PyrR LIT28_19845 IPR029057 Phosphoribosyltransferase-like LIT28_19845 IPR000836 Phosphoribosyltransferase domain LIT28_19850 IPR002942 RNA-binding S4 domain LIT28_19850 IPR036986 RNA-binding S4 domain superfamily LIT28_19850 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LIT28_19850 IPR006225 Pseudouridine synthase, RluC/RluD LIT28_19850 IPR006145 Pseudouridine synthase, RsuA/RluA LIT28_19850 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_19855 IPR001872 Peptidase A8, signal peptidase II LIT28_19865 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIT28_19865 IPR010663 Zinc finger, FPG/IleRS-type LIT28_19865 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LIT28_19865 IPR023585 Isoleucine-tRNA ligase, type 1 LIT28_19865 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_19865 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LIT28_19865 IPR002301 Isoleucine-tRNA ligase LIT28_19865 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain LIT28_19865 IPR002300 Aminoacyl-tRNA synthetase, class Ia LIT28_19865 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_19870 IPR019933 DivIVA domain LIT28_19870 IPR007793 DivIVA family LIT28_19875 IPR040591 YlmH, putative RNA-binding domain LIT28_19875 IPR036986 RNA-binding S4 domain superfamily LIT28_19875 IPR002942 RNA-binding S4 domain LIT28_19875 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LIT28_19880 IPR003425 CCB3/YggT LIT28_19885 IPR007561 Cell division protein SepF/SepF-related LIT28_19885 IPR023052 Cell division protein SepF LIT28_19885 IPR038594 SepF-like superfamily LIT28_19890 IPR029066 PLP-binding barrel LIT28_19890 IPR011078 Pyridoxal phosphate homeostasis protein LIT28_19890 IPR001608 Alanine racemase, N-terminal LIT28_19895 IPR011324 Cytotoxic necrotizing factor-like, catalytic LIT28_19895 IPR038371 Multi-copper polyphenol oxidoreductase superfamily LIT28_19895 IPR003730 Multi-copper polyphenol oxidoreductase LIT28_19900 IPR014238 Sporulation protein YlmC/YmxH LIT28_19900 IPR011033 PRC-barrel-like superfamily LIT28_19900 IPR027275 PRC-barrel domain LIT28_19905 IPR013325 RNA polymerase sigma factor, region 2 LIT28_19905 IPR007624 RNA polymerase sigma-70 region 3 LIT28_19905 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_19905 IPR007627 RNA polymerase sigma-70 region 2 LIT28_19905 IPR007630 RNA polymerase sigma-70 region 4 LIT28_19905 IPR000943 RNA polymerase sigma-70 LIT28_19905 IPR014212 RNA polymerase sigma-G type LIT28_19905 IPR014322 RNA polymerase sigma-B/F/G type LIT28_19905 IPR014284 RNA polymerase sigma-70 like domain LIT28_19910 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_19910 IPR014284 RNA polymerase sigma-70 like domain LIT28_19910 IPR014200 RNA polymerase sigma-E type LIT28_19910 IPR000943 RNA polymerase sigma-70 LIT28_19910 IPR007627 RNA polymerase sigma-70 region 2 LIT28_19910 IPR007630 RNA polymerase sigma-70 region 4 LIT28_19910 IPR013325 RNA polymerase sigma factor, region 2 LIT28_19910 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_19915 IPR005081 Sigma-E processing peptidase SpoIIGA LIT28_19920 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily LIT28_19920 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LIT28_19920 IPR008280 Tubulin/FtsZ, C-terminal LIT28_19920 IPR036525 Tubulin/FtsZ, GTPase domain superfamily LIT28_19920 IPR020805 Cell division protein FtsZ, conserved site LIT28_19920 IPR000158 Cell division protein FtsZ LIT28_19920 IPR024757 Cell division protein FtsZ, C-terminal LIT28_19920 IPR003008 Tubulin/FtsZ, GTPase domain LIT28_19925 IPR003494 SHS2 domain inserted in FtsA LIT28_19925 IPR020823 Cell division protein FtsA LIT28_19930 IPR005548 Cell division protein FtsQ/DivIB LIT28_19930 IPR026580 Cell division protein DivIB LIT28_19930 IPR034746 POTRA domain LIT28_19930 IPR013685 POTRA domain, FtsQ-type LIT28_19935 IPR016169 FAD-binding, type PCMH, subdomain 2 LIT28_19935 IPR016166 FAD-binding domain, PCMH-type LIT28_19935 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_19935 IPR016167 FAD-binding, type PCMH, subdomain 1 LIT28_19935 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase LIT28_19935 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal LIT28_19935 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily LIT28_19935 IPR006094 FAD linked oxidase, N-terminal LIT28_19940 IPR006009 N-acetylglucosaminyltransferase, MurG LIT28_19940 IPR007235 Glycosyl transferase, family 28, C-terminal LIT28_19940 IPR004276 Glycosyltransferase family 28, N-terminal domain LIT28_19945 IPR013438 Sporulation stage V, protein E LIT28_19945 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LIT28_19945 IPR013437 Probable peptidoglycan glycosyltransferase FtsW LIT28_19945 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LIT28_19950 IPR036565 Mur-like, catalytic domain superfamily LIT28_19950 IPR004101 Mur ligase, C-terminal LIT28_19950 IPR036615 Mur ligase, C-terminal domain superfamily LIT28_19950 IPR013221 Mur ligase, central LIT28_19950 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase LIT28_19955 IPR000715 Glycosyl transferase, family 4 LIT28_19955 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase LIT28_19955 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site LIT28_19960 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase LIT28_19960 IPR035911 MurE/MurF, N-terminal LIT28_19960 IPR000713 Mur ligase, N-terminal catalytic domain LIT28_19960 IPR036565 Mur-like, catalytic domain superfamily LIT28_19960 IPR036615 Mur ligase, C-terminal domain superfamily LIT28_19960 IPR004101 Mur ligase, C-terminal LIT28_19960 IPR013221 Mur ligase, central LIT28_19965 IPR001460 Penicillin-binding protein, transpeptidase LIT28_19965 IPR011927 Stage V sporulation protein D LIT28_19965 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_19965 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_19965 IPR012338 Beta-lactamase/transpeptidase-like LIT28_19965 IPR005543 PASTA domain LIT28_19970 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_19970 IPR005543 PASTA domain LIT28_19970 IPR012338 Beta-lactamase/transpeptidase-like LIT28_19970 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_19970 IPR001460 Penicillin-binding protein, transpeptidase LIT28_19975 IPR011922 Cell division protein FtsL LIT28_19975 IPR007060 Septum formation initiator FtsL/DivIC LIT28_19980 IPR002903 Ribosomal RNA small subunit methyltransferase H LIT28_19980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_19980 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily LIT28_19985 IPR011199 Bacillithiol biosynthesis BshC LIT28_19990 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_19990 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_19990 IPR003710 Ketopantoate reductase ApbA/PanE LIT28_19990 IPR013332 Ketopantoate reductase, N-terminal domain LIT28_19990 IPR036291 NAD(P)-binding domain superfamily LIT28_19990 IPR013752 Ketopantoate reductase, C-terminal domain LIT28_19995 IPR017274 Putative N-acetyltransferase YlbP LIT28_19995 IPR000182 GNAT domain LIT28_19995 IPR016181 Acyl-CoA N-acyltransferase LIT28_20000 IPR017930 Myb domain LIT28_20000 IPR009057 Homeobox-like domain superfamily LIT28_20000 IPR014243 Transcription factor, RsfA LIT28_20005 IPR011332 Zinc-binding ribosomal protein LIT28_20005 IPR002677 Ribosomal protein L32p LIT28_20010 IPR003772 Large ribosomal RNA subunit accumulation protein YceD LIT28_20015 IPR008513 tRNA(Met) cytidine acetate ligase LIT28_20015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_20020 IPR039381 Endopeptidase La, PDZ domain LIT28_20020 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_20020 IPR001478 PDZ domain LIT28_20020 IPR036034 PDZ superfamily LIT28_20020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_20020 IPR027065 Lon protease LIT28_20020 IPR008269 Peptidase S16, Lon proteolytic domain LIT28_20025 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LIT28_20025 IPR001423 Lysophospholipase patatin, conserved site LIT28_20025 IPR002641 Patatin-like phospholipase domain LIT28_20030 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LIT28_20030 IPR014226 Sporulation integral membrane protein YlbJ LIT28_20035 IPR004821 Cytidyltransferase-like domain LIT28_20035 IPR001980 Phosphopantetheine adenylyltransferase LIT28_20035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_20040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_20040 IPR004398 RNA methyltransferase, RsmD LIT28_20050 IPR016979 Protein of unknown function DUF2129 LIT28_20055 IPR010368 Control of competence regulator ComK, YlbF/YmcA LIT28_20055 IPR023378 YheA/YmcA-like domain superfamily LIT28_20060 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site LIT28_20060 IPR029033 Histidine phosphatase superfamily LIT28_20060 IPR013078 Histidine phosphatase superfamily, clade-1 LIT28_20065 IPR025613 YlbE-like protein LIT28_20070 IPR025953 Putative coat protein YlbD LIT28_20075 IPR029410 CAP-associated domain LIT28_20075 IPR035940 CAP superfamily LIT28_20075 IPR014044 CAP domain LIT28_20080 IPR036491 YugN-like superfamily LIT28_20080 IPR014967 Uncharacterised protein family, YugN-like LIT28_20085 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG LIT28_20085 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related LIT28_20090 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae LIT28_20090 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes LIT28_20095 IPR024791 Cytochrome c oxidase subunit III LIT28_20095 IPR000298 Cytochrome c oxidase subunit III-like LIT28_20095 IPR033946 Ubiquinol oxidase subunit III domain LIT28_20095 IPR035973 Cytochrome c oxidase subunit III-like superfamily LIT28_20095 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle LIT28_20100 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site LIT28_20100 IPR036927 Cytochrome c oxidase-like, subunit I superfamily LIT28_20100 IPR014241 Cytochrome c oxidase, subunit I bacterial type LIT28_20100 IPR000883 Cytochrome c oxidase subunit I LIT28_20100 IPR023616 Cytochrome c oxidase-like, subunit I domain LIT28_20105 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily LIT28_20105 IPR014222 Cytochrome c oxidase, subunit II LIT28_20105 IPR036909 Cytochrome c-like domain superfamily LIT28_20105 IPR009056 Cytochrome c-like domain LIT28_20105 IPR008972 Cupredoxin LIT28_20105 IPR001505 Copper centre Cu(A) LIT28_20105 IPR002429 Cytochrome c oxidase subunit II-like C-terminal LIT28_20105 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain LIT28_20110 IPR006369 Protohaem IX farnesyltransferase LIT28_20110 IPR000537 UbiA prenyltransferase family LIT28_20110 IPR030470 UbiA prenyltransferase conserved site LIT28_20115 IPR003780 COX15/CtaA family LIT28_20115 IPR023755 Heme A synthase, type 1 LIT28_20120 IPR005481 Biotin carboxylase-like, N-terminal domain LIT28_20120 IPR011764 Biotin carboxylation domain LIT28_20120 IPR005482 Biotin carboxylase, C-terminal LIT28_20120 IPR003379 Carboxylase, conserved domain LIT28_20120 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LIT28_20120 IPR016185 Pre-ATP-grasp domain superfamily LIT28_20120 IPR000891 Pyruvate carboxyltransferase LIT28_20120 IPR005930 Pyruvate carboxylase LIT28_20120 IPR011054 Rudiment single hybrid motif LIT28_20120 IPR011761 ATP-grasp fold LIT28_20120 IPR011053 Single hybrid motif LIT28_20120 IPR000089 Biotin/lipoyl attachment LIT28_20120 IPR013785 Aldolase-type TIM barrel LIT28_20125 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LIT28_20125 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LIT28_20130 IPR036270 UPF0358 superfamily LIT28_20130 IPR009983 Uncharacterised protein family UPF0358 LIT28_20140 IPR002716 PIN domain LIT28_20140 IPR029060 PIN-like domain superfamily LIT28_20140 IPR003714 PhoH-like protein LIT28_20140 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_20150 IPR019241 Protein of unknown function DUF2197 LIT28_20160 IPR025620 YlaH-like protein LIT28_20165 IPR042116 GTP-binding protein TypA/BipA, C-terminal LIT28_20165 IPR035647 EF-G domain III/V-like LIT28_20165 IPR004161 Translation elongation factor EFTu-like, domain 2 LIT28_20165 IPR031157 Tr-type G domain, conserved site LIT28_20165 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_20165 IPR005225 Small GTP-binding protein domain LIT28_20165 IPR000795 Transcription factor, GTP-binding domain LIT28_20165 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_20165 IPR006298 GTP-binding protein TypA LIT28_20165 IPR035651 BipA, domain V LIT28_20165 IPR041095 Elongation Factor G, domain II LIT28_20165 IPR000640 Elongation factor EFG, domain V-like LIT28_20175 IPR020583 Inositol monophosphatase, metal-binding site LIT28_20175 IPR000760 Inositol monophosphatase-like LIT28_20175 IPR020550 Inositol monophosphatase, conserved site LIT28_20185 IPR009403 Protein of unknown function UPF0637 LIT28_20190 IPR007920 Protein of unknown function UPF0223 LIT28_20190 IPR023324 BH2638-like superfamily LIT28_20195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_20195 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_20195 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_20195 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily LIT28_20195 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal LIT28_20195 IPR000310 Orn/Lys/Arg decarboxylase, major domain LIT28_20200 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria LIT28_20235 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIT28_20235 IPR023753 FAD/NAD(P)-binding domain LIT28_20235 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_20235 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LIT28_20235 IPR006258 Dihydrolipoamide dehydrogenase LIT28_20235 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT28_20235 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LIT28_20240 IPR011053 Single hybrid motif LIT28_20240 IPR004167 Peripheral subunit-binding domain LIT28_20240 IPR036625 E3-binding domain superfamily LIT28_20240 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_20240 IPR000089 Biotin/lipoyl attachment LIT28_20240 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LIT28_20240 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LIT28_20245 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LIT28_20245 IPR029061 Thiamin diphosphate-binding fold LIT28_20245 IPR005475 Transketolase-like, pyrimidine-binding domain LIT28_20245 IPR033248 Transketolase, C-terminal domain LIT28_20250 IPR029061 Thiamin diphosphate-binding fold LIT28_20250 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha LIT28_20250 IPR001017 Dehydrogenase, E1 component LIT28_20260 IPR036821 Peptide deformylase superfamily LIT28_20260 IPR023635 Peptide deformylase LIT28_20265 IPR000150 Cof family LIT28_20265 IPR036412 HAD-like superfamily LIT28_20265 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_20265 IPR023214 HAD superfamily LIT28_20270 IPR009907 Protein of unknown function DUF1447 LIT28_20275 IPR030854 Ribonuclease J, bacteria LIT28_20275 IPR041636 Ribonuclease J, C-terminal LIT28_20275 IPR001587 Ribonuclease J, conserved site LIT28_20275 IPR001279 Metallo-beta-lactamase LIT28_20275 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_20275 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain LIT28_20275 IPR004613 Ribonuclease J LIT28_20275 IPR042173 Ribonuclease J, domain 2 LIT28_20280 IPR036291 NAD(P)-binding domain superfamily LIT28_20280 IPR006037 Regulator of K+ conductance, C-terminal LIT28_20280 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LIT28_20280 IPR003148 Regulator of K+ conductance, N-terminal LIT28_20290 IPR011650 Peptidase M20, dimerisation domain LIT28_20290 IPR002933 Peptidase M20 LIT28_20290 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_20290 IPR017439 Amidohydrolase LIT28_20290 IPR023905 Acetyldiaminopimelate deacetylase LIT28_20295 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH LIT28_20295 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal LIT28_20295 IPR001451 Hexapeptide repeat LIT28_20295 IPR018357 Hexapeptide transferase, conserved site LIT28_20295 IPR011004 Trimeric LpxA-like superfamily LIT28_20300 IPR000847 Transcription regulator HTH, LysR LIT28_20300 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_20300 IPR036390 Winged helix DNA-binding domain superfamily LIT28_20300 IPR005119 LysR, substrate-binding LIT28_20310 IPR025446 Antirepressor AbbA LIT28_20315 IPR007405 Bacteriophage KVP40, Orf299 LIT28_20325 IPR014904 Protein of unknown function DUF1797 LIT28_20325 IPR038073 YkuJ-like superfamily LIT28_20340 IPR018842 YkuI, C-terminal LIT28_20340 IPR029151 Periplasmic sensor-like domain superfamily LIT28_20340 IPR035919 EAL domain superfamily LIT28_20340 IPR001633 EAL domain LIT28_20345 IPR036291 NAD(P)-binding domain superfamily LIT28_20345 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_20350 IPR029052 Metallo-dependent phosphatase-like LIT28_20350 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_20350 IPR006311 Twin-arginine translocation pathway, signal sequence LIT28_20350 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LIT28_20360 IPR024953 Polyphosphate kinase middle domain LIT28_20360 IPR041108 Polyphosphate kinase, C-terminal domain 1 LIT28_20360 IPR003414 Polyphosphate kinase LIT28_20360 IPR036830 Polyphosphate kinase middle domain superfamily LIT28_20360 IPR025200 Polyphosphate kinase C-terminal domain 2 LIT28_20360 IPR025198 Polyphosphate kinase N-terminal domain LIT28_20360 IPR036832 Polyphosphate kinase N-terminal domain superfamily LIT28_20365 IPR003695 Ppx/GppA phosphatase LIT28_20370 IPR025552 YkyB-like protein LIT28_20395 IPR020846 Major facilitator superfamily domain LIT28_20395 IPR011701 Major facilitator superfamily LIT28_20395 IPR036259 MFS transporter superfamily LIT28_20395 IPR004638 Drug resistance transporter EmrB-like LIT28_20405 IPR038071 UROD/MetE-like superfamily LIT28_20405 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal LIT28_20405 IPR006276 Cobalamin-independent methionine synthase LIT28_20405 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal LIT28_20415 IPR029476 Deoxyribonuclease NucA/NucB LIT28_20425 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_20425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_20425 IPR005467 Histidine kinase domain LIT28_20425 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_20425 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_20425 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_20435 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LIT28_20435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_20435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_20435 IPR004839 Aminotransferase, class I/classII LIT28_20435 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_20440 IPR028082 Periplasmic binding protein-like I LIT28_20440 IPR001761 Periplasmic binding protein/LacI sugar binding domain LIT28_20440 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_20440 IPR000843 LacI-type HTH domain LIT28_20445 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_20445 IPR035906 MetI-like superfamily LIT28_20450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_20450 IPR035906 MetI-like superfamily LIT28_20455 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein LIT28_20455 IPR006059 Bacterial extracellular solute-binding protein LIT28_20460 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LIT28_20460 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain LIT28_20460 IPR013783 Immunoglobulin-like fold LIT28_20460 IPR032091 Maltogenic Amylase, C-terminal LIT28_20460 IPR013780 Glycosyl hydrolase, all-beta LIT28_20460 IPR017853 Glycoside hydrolase superfamily LIT28_20465 IPR032091 Maltogenic Amylase, C-terminal LIT28_20465 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LIT28_20465 IPR013780 Glycosyl hydrolase, all-beta LIT28_20465 IPR017853 Glycoside hydrolase superfamily LIT28_20470 IPR040582 MalK, OB fold domain LIT28_20470 IPR008995 Molybdate/tungstate binding, C-terminal LIT28_20470 IPR017871 ABC transporter, conserved site LIT28_20470 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_20470 IPR005116 Transport-associated OB, type 1 LIT28_20470 IPR003593 AAA+ ATPase domain LIT28_20470 IPR003439 ABC transporter-like LIT28_20475 IPR036291 NAD(P)-binding domain superfamily LIT28_20475 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_20475 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_20505 IPR001238 DNA-binding, RecF LIT28_20505 IPR042174 DNA-binding RecF, domain 2 LIT28_20505 IPR003395 RecF/RecN/SMC, N-terminal LIT28_20505 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_20505 IPR018078 DNA-binding, RecF, conserved site LIT28_20510 IPR020616 Thiolase, N-terminal LIT28_20510 IPR020610 Thiolase, active site LIT28_20510 IPR020613 Thiolase, conserved site LIT28_20510 IPR016039 Thiolase-like LIT28_20510 IPR020615 Thiolase, acyl-enzyme intermediate active site LIT28_20510 IPR020617 Thiolase, C-terminal LIT28_20510 IPR002155 Thiolase LIT28_20515 IPR020476 NUDIX hydrolase LIT28_20515 IPR000086 NUDIX hydrolase domain LIT28_20515 IPR020084 NUDIX hydrolase, conserved site LIT28_20515 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_20540 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_20540 IPR036390 Winged helix DNA-binding domain superfamily LIT28_20540 IPR005149 Transcription regulator PadR, N-terminal LIT28_20545 IPR011294 3-hydroxybutyrate dehydrogenase LIT28_20545 IPR036291 NAD(P)-binding domain superfamily LIT28_20545 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_20545 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_20555 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal LIT28_20555 IPR011559 Initiation factor 2B alpha/beta/delta LIT28_20555 IPR037171 NagB/RpiA transferase-like LIT28_20555 IPR005251 Methylthioribose-1-phosphate isomerase LIT28_20555 IPR000649 Initiation factor 2B-related LIT28_20560 IPR009212 Methylthioribose kinase LIT28_20560 IPR011009 Protein kinase-like domain superfamily LIT28_20560 IPR002575 Aminoglycoside phosphotransferase LIT28_20565 IPR003010 Carbon-nitrogen hydrolase LIT28_20565 IPR036526 Carbon-nitrogen hydrolase superfamily LIT28_20570 IPR004839 Aminotransferase, class I/classII LIT28_20570 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_20570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_20570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_20575 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal LIT28_20575 IPR036422 RuBisCO large subunit, N-terminal domain superfamily LIT28_20575 IPR033966 RuBisCO LIT28_20575 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal LIT28_20575 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily LIT28_20575 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase LIT28_20580 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase LIT28_20580 IPR023214 HAD superfamily LIT28_20580 IPR006384 Pyridoxal phosphate phosphatase-related LIT28_20580 IPR036412 HAD-like superfamily LIT28_20585 IPR001303 Class II aldolase/adducin N-terminal LIT28_20585 IPR036409 Class II aldolase/adducin N-terminal domain superfamily LIT28_20585 IPR017714 Methylthioribulose-1-phosphate dehydratase LIT28_20590 IPR004313 Acireductone dioxygenase ARD family LIT28_20590 IPR023956 Acireductone dioxygenase ARD, bacteria LIT28_20590 IPR014710 RmlC-like jelly roll fold LIT28_20590 IPR011051 RmlC-like cupin domain superfamily LIT28_20605 IPR036291 NAD(P)-binding domain superfamily LIT28_20605 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain LIT28_20605 IPR015815 3-hydroxyisobutyrate dehydrogenase-related LIT28_20605 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LIT28_20605 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site LIT28_20605 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_20605 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_20610 IPR022849 Peptidase S12, YfeW/YbbE-like LIT28_20610 IPR012338 Beta-lactamase/transpeptidase-like LIT28_20610 IPR001466 Beta-lactamase-related LIT28_20615 IPR035965 PAS domain superfamily LIT28_20615 IPR000014 PAS domain LIT28_20615 IPR029787 Nucleotide cyclase LIT28_20615 IPR013656 PAS fold-4 LIT28_20615 IPR000160 GGDEF domain LIT28_20615 IPR000700 PAS-associated, C-terminal LIT28_20620 IPR029479 Nitroreductase LIT28_20620 IPR000415 Nitroreductase-like LIT28_20635 IPR018274 PEP-utilising enzyme, active site LIT28_20635 IPR008279 PEP-utilising enzyme, mobile domain LIT28_20635 IPR036637 Phosphohistidine domain superfamily LIT28_20635 IPR024692 Phosphotransferase system, enzyme I LIT28_20635 IPR006318 Phosphotransferase system, enzyme I-like LIT28_20635 IPR008731 Phosphotransferase system, enzyme I N-terminal LIT28_20635 IPR036618 PtsI, HPr-binding domain superfamily LIT28_20635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIT28_20635 IPR040442 Pyruvate kinase-like domain superfamily LIT28_20635 IPR023151 PEP-utilising enzyme, conserved site LIT28_20635 IPR000121 PEP-utilising enzyme, C-terminal LIT28_20640 IPR000032 Phosphocarrier protein HPr-like LIT28_20640 IPR035895 HPr-like superfamily LIT28_20640 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LIT28_20640 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LIT28_20645 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site LIT28_20645 IPR003352 Phosphotransferase system, EIIC LIT28_20645 IPR011055 Duplicated hybrid motif LIT28_20645 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LIT28_20645 IPR011299 PTS system glucose-specific IIBC component LIT28_20645 IPR001996 Phosphotransferase system, IIB component, type 1 LIT28_20645 IPR013013 Phosphotransferase system, EIIC component, type 1 LIT28_20645 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component LIT28_20645 IPR036878 Glucose permease domain IIB LIT28_20650 IPR004341 CAT RNA-binding domain LIT28_20650 IPR036650 CAT RNA-binding domain superfamily LIT28_20650 IPR011608 PRD domain LIT28_20650 IPR036634 PRD domain superfamily LIT28_20650 IPR001550 Transcription antiterminator, conserved site LIT28_20660 IPR000524 Transcription regulator HTH, GntR LIT28_20660 IPR011663 UbiC transcription regulator-associated LIT28_20660 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_20660 IPR036390 Winged helix DNA-binding domain superfamily LIT28_20660 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LIT28_20665 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase LIT28_20665 IPR004547 Glucosamine-6-phosphate isomerase LIT28_20665 IPR018321 Glucosamine-6-phosphate isomerase, conserved site LIT28_20665 IPR037171 NagB/RpiA transferase-like LIT28_20670 IPR032466 Metal-dependent hydrolase LIT28_20670 IPR006680 Amidohydrolase-related LIT28_20670 IPR003764 N-acetylglucosamine-6-phosphate deacetylase LIT28_20670 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_20680 IPR005234 Chromosome segregation/condensation protein ScpB LIT28_20680 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_20680 IPR036390 Winged helix DNA-binding domain superfamily LIT28_20685 IPR023093 ScpA-like, C-terminal LIT28_20685 IPR003768 Segregation and condensation protein A LIT28_20695 IPR023203 TTHA0068-like superfamily LIT28_20695 IPR005500 Protein of unknown function DUF309 LIT28_20700 IPR016181 Acyl-CoA N-acyltransferase LIT28_20700 IPR000182 GNAT domain LIT28_20705 IPR029000 Cyclophilin-like domain superfamily LIT28_20705 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase LIT28_20705 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site LIT28_20705 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain LIT28_20710 IPR009343 Protein of unknown function DUF1002 LIT28_20715 IPR000150 Cof family LIT28_20715 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_20715 IPR023214 HAD superfamily LIT28_20715 IPR036412 HAD-like superfamily LIT28_20720 IPR004995 Bacillus/Clostridium Ger spore germination protein LIT28_20725 IPR025914 Stage V sporulation protein AE LIT28_20730 IPR014204 Sporulation stage V, protein AE LIT28_20730 IPR005562 SpoVA LIT28_20735 IPR010894 Stage V sporulation AD LIT28_20735 IPR038369 Stage V sporulation AD superfamily LIT28_20735 IPR016039 Thiolase-like LIT28_20740 IPR014203 Sporulation stage V, protein AC LIT28_20740 IPR005562 SpoVA LIT28_20745 IPR020144 Stage V sporulation protein AB LIT28_20750 IPR021997 Stage V sporulation protein AA LIT28_20750 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily LIT28_20760 IPR000175 Sodium:neurotransmitter symporter LIT28_20760 IPR037272 Sodium:neurotransmitter symporter superfamily LIT28_20765 IPR007624 RNA polymerase sigma-70 region 3 LIT28_20765 IPR014322 RNA polymerase sigma-B/F/G type LIT28_20765 IPR014236 RNA polymerase sigma-F type LIT28_20765 IPR000943 RNA polymerase sigma-70 LIT28_20765 IPR013325 RNA polymerase sigma factor, region 2 LIT28_20765 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_20765 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_20765 IPR007630 RNA polymerase sigma-70 region 4 LIT28_20765 IPR007627 RNA polymerase sigma-70 region 2 LIT28_20765 IPR014284 RNA polymerase sigma-70 like domain LIT28_20770 IPR010194 Anti-sigma F factor LIT28_20770 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_20770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_20775 IPR036513 STAS domain superfamily LIT28_20775 IPR002645 STAS domain LIT28_20775 IPR014237 Anti-sigma F factor antagonist LIT28_20775 IPR003658 Anti-sigma factor antagonist LIT28_20780 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIT28_20780 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LIT28_20780 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIT28_20780 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIT28_20780 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LIT28_20780 IPR012338 Beta-lactamase/transpeptidase-like LIT28_20785 IPR036390 Winged helix DNA-binding domain superfamily LIT28_20785 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_20785 IPR000524 Transcription regulator HTH, GntR LIT28_20790 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_20790 IPR003593 AAA+ ATPase domain LIT28_20790 IPR003439 ABC transporter-like LIT28_20810 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_20810 IPR036390 Winged helix DNA-binding domain superfamily LIT28_20810 IPR000835 MarR-type HTH domain LIT28_20820 IPR006043 Xanthine/uracil/vitamin C permease LIT28_20825 IPR004488 Magnesium/cobalt transport protein CorA LIT28_20825 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB LIT28_20830 IPR000312 Glycosyl transferase, family 3 LIT28_20830 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase LIT28_20830 IPR017459 Glycosyl transferase family 3, N-terminal domain LIT28_20830 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LIT28_20830 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site LIT28_20830 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic LIT28_20830 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal LIT28_20830 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LIT28_20830 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily LIT28_20835 IPR018099 Purine phosphorylase, family 2, conserved site LIT28_20835 IPR035994 Nucleoside phosphorylase superfamily LIT28_20835 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific LIT28_20835 IPR011268 Purine nucleoside phosphorylase LIT28_20835 IPR000845 Nucleoside phosphorylase domain LIT28_20840 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIT28_20840 IPR010045 Phosphopentomutase LIT28_20840 IPR024052 Phosphopentomutase DeoB cap domain superfamily LIT28_20840 IPR006124 Metalloenzyme LIT28_20850 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_20850 IPR013762 Integrase-like, catalytic domain superfamily LIT28_20850 IPR011932 Tyrosine recombinase XerD LIT28_20850 IPR002104 Integrase, catalytic domain LIT28_20850 IPR023009 Tyrosine recombinase XerC/XerD LIT28_20850 IPR010998 Integrase/recombinase, N-terminal LIT28_20850 IPR004107 Integrase, SAM-like, N-terminal LIT28_20855 IPR025321 Protein of unknown function DUF4227 LIT28_20860 IPR002481 Ferric-uptake regulator LIT28_20860 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_20860 IPR036390 Winged helix DNA-binding domain superfamily LIT28_20865 IPR014196 Stage II sporulation protein M LIT28_20865 IPR002798 Stage II sporulation protein M-like LIT28_20875 IPR000086 NUDIX hydrolase domain LIT28_20875 IPR004385 Nucleoside diphosphate pyrophosphatase LIT28_20875 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_20875 IPR020084 NUDIX hydrolase, conserved site LIT28_20880 IPR025177 Cell division inhibitor MciZ LIT28_20885 IPR020471 Aldo/keto reductase LIT28_20885 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_20885 IPR023210 NADP-dependent oxidoreductase domain LIT28_20890 IPR020471 Aldo/keto reductase LIT28_20890 IPR023210 NADP-dependent oxidoreductase domain LIT28_20890 IPR018170 Aldo/keto reductase, conserved site LIT28_20890 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_20895 IPR016181 Acyl-CoA N-acyltransferase LIT28_20895 IPR007344 GrpB/Dephospho-CoA kinase LIT28_20895 IPR000182 GNAT domain LIT28_20905 IPR006146 5'-Nucleotidase, conserved site LIT28_20905 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LIT28_20905 IPR008334 5'-Nucleotidase, C-terminal LIT28_20905 IPR041831 Endonuclease YhcR, metallophosphatase domain LIT28_20905 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold LIT28_20905 IPR029052 Metallo-dependent phosphatase-like LIT28_20905 IPR019948 Gram-positive LPXTG cell wall anchor LIT28_20905 IPR035437 SNase-like, OB-fold superfamily LIT28_20905 IPR012340 Nucleic acid-binding, OB-fold LIT28_20905 IPR019931 LPXTG cell wall anchor domain LIT28_20905 IPR006179 5'-Nucleotidase/apyrase LIT28_20905 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_20915 IPR022742 Serine aminopeptidase, S33 LIT28_20915 IPR029058 Alpha/Beta hydrolase fold LIT28_20915 IPR002410 Peptidase S33 LIT28_20920 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LIT28_20920 IPR032813 Putative Na+/H+ antiporter, N-terminal LIT28_20925 IPR028082 Periplasmic binding protein-like I LIT28_20925 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_20925 IPR000843 LacI-type HTH domain LIT28_20930 IPR000182 GNAT domain LIT28_20930 IPR016181 Acyl-CoA N-acyltransferase LIT28_20935 IPR029058 Alpha/Beta hydrolase fold LIT28_20935 IPR022742 Serine aminopeptidase, S33 LIT28_20940 IPR020157 Uncharacterised protein family YqkC LIT28_20950 IPR016192 APOBEC/CMP deaminase, zinc-binding LIT28_20950 IPR002125 Cytidine and deoxycytidylate deaminase domain LIT28_20950 IPR024072 Dihydrofolate reductase-like domain superfamily LIT28_20950 IPR004794 Riboflavin biosynthesis protein RibD LIT28_20950 IPR016193 Cytidine deaminase-like LIT28_20950 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal LIT28_20950 IPR011549 Riboflavin-specific deaminase, C-terminal LIT28_20955 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LIT28_20955 IPR001783 Lumazine-binding protein LIT28_20955 IPR026017 Lumazine-binding domain LIT28_20955 IPR017938 Riboflavin synthase-like beta-barrel LIT28_20960 IPR016299 Riboflavin biosynthesis protein RibBA LIT28_20960 IPR036144 RibA-like superfamily LIT28_20960 IPR032677 GTP cyclohydrolase II LIT28_20960 IPR000926 GTP cyclohydrolase II, RibA LIT28_20960 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB LIT28_20960 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LIT28_20965 IPR036467 Lumazine/riboflavin synthase superfamily LIT28_20965 IPR034964 Lumazine synthase LIT28_20965 IPR002180 Lumazine/riboflavin synthase LIT28_20975 IPR007197 Radical SAM LIT28_20975 IPR006638 Elp3/MiaB/NifB LIT28_20975 IPR024177 Biotin synthase LIT28_20975 IPR013785 Aldolase-type TIM barrel LIT28_20975 IPR010722 Biotin and thiamin synthesis-associated domain LIT28_20975 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB LIT28_20980 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LIT28_20980 IPR025714 Methyltransferase domain LIT28_20980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_20985 IPR029058 Alpha/Beta hydrolase fold LIT28_20985 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LIT28_20985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_20985 IPR013216 Methyltransferase type 11 LIT28_20985 IPR000073 Alpha/beta hydrolase fold-1 LIT28_20990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_20990 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LIT28_20990 IPR004839 Aminotransferase, class I/classII LIT28_20990 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type LIT28_20990 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_20990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_20995 IPR004472 Dethiobiotin synthase BioD LIT28_20995 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_21000 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_21000 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA LIT28_21000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_21000 IPR005814 Aminotransferase class-III LIT28_21010 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LIT28_21010 IPR004770 Na+/H+ antiporter NhaC LIT28_21015 IPR008334 5'-Nucleotidase, C-terminal LIT28_21015 IPR019931 LPXTG cell wall anchor domain LIT28_21015 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LIT28_21015 IPR041827 CpdB, N-terminal metallophosphatase domain LIT28_21015 IPR006146 5'-Nucleotidase, conserved site LIT28_21015 IPR006179 5'-Nucleotidase/apyrase LIT28_21015 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_21015 IPR029052 Metallo-dependent phosphatase-like LIT28_21025 IPR011008 Dimeric alpha-beta barrel LIT28_21025 IPR000485 AsnC-type HTH domain LIT28_21025 IPR011991 ArsR-like helix-turn-helix domain LIT28_21025 IPR036390 Winged helix DNA-binding domain superfamily LIT28_21025 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_21025 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LIT28_21025 IPR019888 Transcription regulator AsnC-type LIT28_21090 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LIT28_21090 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LIT28_21090 IPR002292 Ornithine/putrescine carbamoyltransferase LIT28_21090 IPR024904 Ornithine carbamoyltransferase LIT28_21090 IPR006130 Aspartate/ornithine carbamoyltransferase LIT28_21090 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LIT28_21095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_21095 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_21095 IPR004636 Acetylornithine/Succinylornithine transaminase family LIT28_21095 IPR005814 Aminotransferase class-III LIT28_21095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_21100 IPR037528 Acetylglutamate kinase ArgB LIT28_21100 IPR001048 Aspartate/glutamate/uridylate kinase LIT28_21100 IPR004662 Acetylglutamate kinase family LIT28_21100 IPR036393 Acetylglutamate kinase-like superfamily LIT28_21105 IPR002813 Arginine biosynthesis protein ArgJ LIT28_21105 IPR016117 ArgJ-like domain superfamily LIT28_21105 IPR042195 ArgJ beta chain, C-terminal domain LIT28_21110 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 LIT28_21110 IPR036291 NAD(P)-binding domain superfamily LIT28_21110 IPR000534 Semialdehyde dehydrogenase, NAD-binding LIT28_21110 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LIT28_21120 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_21120 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_21120 IPR036291 NAD(P)-binding domain superfamily LIT28_21125 IPR001279 Metallo-beta-lactamase LIT28_21125 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_21130 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LIT28_21130 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain LIT28_21130 IPR000304 Pyrroline-5-carboxylate reductase LIT28_21130 IPR036291 NAD(P)-binding domain superfamily LIT28_21130 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_21135 IPR004642 Serine dehydratase, alpha subunit LIT28_21135 IPR005130 Serine dehydratase-like, alpha subunit LIT28_21140 IPR029009 Allosteric substrate binding domain superfamily LIT28_21140 IPR002912 ACT domain LIT28_21140 IPR005131 Serine dehydratase beta chain LIT28_21140 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit LIT28_21150 IPR001279 Metallo-beta-lactamase LIT28_21150 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_21150 IPR013471 Ribonuclease Z/BN LIT28_21160 IPR001126 UmuC domain LIT28_21160 IPR024728 DNA polymerase type-Y, HhH motif LIT28_21160 IPR022880 DNA polymerase IV LIT28_21160 IPR036775 DNA polymerase, Y-family, little finger domain superfamily LIT28_21160 IPR017961 DNA polymerase, Y-family, little finger domain LIT28_21165 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_21165 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LIT28_21165 IPR002933 Peptidase M20 LIT28_21165 IPR011650 Peptidase M20, dimerisation domain LIT28_21165 IPR008007 Peptidase M42 LIT28_21165 IPR010162 Peptidase M20B, peptidase T-like LIT28_21170 IPR016181 Acyl-CoA N-acyltransferase LIT28_21170 IPR000182 GNAT domain LIT28_21185 IPR038063 L,D-transpeptidase catalytic domain-like LIT28_21185 IPR005490 L,D-transpeptidase catalytic domain LIT28_21190 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily LIT28_21190 IPR010343 Aromatic acid exporter family member 1 LIT28_21190 IPR021062 Putative aromatic acid exporter, C-terminal LIT28_21195 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21195 IPR017871 ABC transporter, conserved site LIT28_21195 IPR003439 ABC transporter-like LIT28_21195 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LIT28_21195 IPR003593 AAA+ ATPase domain LIT28_21200 IPR035906 MetI-like superfamily LIT28_21200 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LIT28_21200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_21205 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LIT28_21205 IPR001320 Ionotropic glutamate receptor LIT28_21205 IPR018313 Solute-binding protein family 3, conserved site LIT28_21210 IPR036249 Thioredoxin-like superfamily LIT28_21210 IPR009474 Putative bacilliredoxin, YphP/YqiW family LIT28_21215 IPR016787 Uncharacterised conserved protein UCP021328 LIT28_21220 IPR000086 NUDIX hydrolase domain LIT28_21220 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_21220 IPR022925 NADH pyrophosphatase NudC LIT28_21220 IPR020084 NUDIX hydrolase, conserved site LIT28_21220 IPR015376 Zinc ribbon, NADH pyrophosphatase LIT28_21225 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LIT28_21225 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LIT28_21225 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB LIT28_21230 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_21230 IPR000089 Biotin/lipoyl attachment LIT28_21230 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LIT28_21230 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LIT28_21230 IPR004167 Peripheral subunit-binding domain LIT28_21230 IPR036625 E3-binding domain superfamily LIT28_21230 IPR011053 Single hybrid motif LIT28_21235 IPR029061 Thiamin diphosphate-binding fold LIT28_21235 IPR005475 Transketolase-like, pyrimidine-binding domain LIT28_21235 IPR033248 Transketolase, C-terminal domain LIT28_21235 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LIT28_21240 IPR029061 Thiamin diphosphate-binding fold LIT28_21240 IPR001017 Dehydrogenase, E1 component LIT28_21245 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT28_21245 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LIT28_21245 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LIT28_21245 IPR006258 Dihydrolipoamide dehydrogenase LIT28_21245 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIT28_21245 IPR023753 FAD/NAD(P)-binding domain LIT28_21245 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_21250 IPR023865 Aliphatic acid kinase, short-chain, conserved site LIT28_21250 IPR000890 Aliphatic acid kinase, short-chain LIT28_21250 IPR011245 Butyrate kinase LIT28_21255 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal LIT28_21255 IPR033524 Leu/Phe/Val dehydrogenases active site LIT28_21255 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal LIT28_21255 IPR036291 NAD(P)-binding domain superfamily LIT28_21255 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase LIT28_21255 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain LIT28_21260 IPR002505 Phosphate acetyl/butaryl transferase LIT28_21260 IPR012147 Phosphate acetyl/butyryltransferase LIT28_21260 IPR014079 Phosphate butyryltransferase LIT28_21265 IPR036291 NAD(P)-binding domain superfamily LIT28_21265 IPR025944 Sigma-54 interaction domain, conserved site LIT28_21265 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LIT28_21265 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LIT28_21265 IPR002078 RNA polymerase sigma factor 54 interaction domain LIT28_21265 IPR035965 PAS domain superfamily LIT28_21265 IPR000014 PAS domain LIT28_21265 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21265 IPR002197 DNA binding HTH domain, Fis-type LIT28_21265 IPR009057 Homeobox-like domain superfamily LIT28_21265 IPR013767 PAS fold LIT28_21265 IPR003593 AAA+ ATPase domain LIT28_21275 IPR030395 Glycerophosphodiester phosphodiesterase domain LIT28_21275 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LIT28_21280 IPR025550 YycC-like protein LIT28_21290 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_21290 IPR012052 Sporulation transcription factor Spo0A LIT28_21290 IPR014879 Sporulation initiation factor Spo0A, C-terminal LIT28_21290 IPR001789 Signal transduction response regulator, receiver domain LIT28_21290 IPR011006 CheY-like superfamily LIT28_21290 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_21295 IPR001478 PDZ domain LIT28_21295 IPR036034 PDZ superfamily LIT28_21295 IPR041489 PDZ domain 6 LIT28_21295 IPR008763 Peptidase S55, SpoIVB LIT28_21295 IPR014219 Peptidase S55, sporulation stage IV, protein B LIT28_21295 IPR009003 Peptidase S1, PA clan LIT28_21300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21300 IPR038729 Rad50/SbcC-type AAA domain LIT28_21300 IPR004604 DNA recombination/repair protein RecN LIT28_21305 IPR036390 Winged helix DNA-binding domain superfamily LIT28_21305 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_21305 IPR020900 Arginine repressor, DNA-binding domain LIT28_21305 IPR036251 Arginine repressor, C-terminal domain superfamily LIT28_21305 IPR020899 Arginine repressor, C-terminal LIT28_21305 IPR001669 Arginine repressor LIT28_21310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_21310 IPR002942 RNA-binding S4 domain LIT28_21310 IPR036986 RNA-binding S4 domain superfamily LIT28_21310 IPR002877 Ribosomal RNA methyltransferase FtsJ domain LIT28_21310 IPR004538 Haemolysin A /rRNA methyltransferase TlyA LIT28_21315 IPR005477 Deoxyxylulose-5-phosphate synthase LIT28_21315 IPR029061 Thiamin diphosphate-binding fold LIT28_21315 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LIT28_21315 IPR005475 Transketolase-like, pyrimidine-binding domain LIT28_21315 IPR020826 Transketolase binding site LIT28_21315 IPR005474 Transketolase, N-terminal LIT28_21315 IPR033248 Transketolase, C-terminal domain LIT28_21320 IPR033749 Polyprenyl synthetase, conserved site LIT28_21320 IPR000092 Polyprenyl synthetase LIT28_21320 IPR008949 Isoprenoid synthase domain superfamily LIT28_21325 IPR003761 Exonuclease VII, small subunit LIT28_21325 IPR037004 Exonuclease VII, small subunit superfamily LIT28_21330 IPR003753 Exonuclease VII, large subunit LIT28_21330 IPR020579 Exonuclease VII, large subunit, C-terminal LIT28_21330 IPR025824 OB-fold nucleic acid binding domain LIT28_21335 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LIT28_21335 IPR036291 NAD(P)-binding domain superfamily LIT28_21335 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase LIT28_21335 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LIT28_21335 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site LIT28_21340 IPR006027 NusB/RsmB/TIM44 LIT28_21340 IPR011605 NusB antitermination factor LIT28_21340 IPR035926 NusB-like superfamily LIT28_21345 IPR005531 Alkaline shock protein Asp23 LIT28_21350 IPR005482 Biotin carboxylase, C-terminal LIT28_21350 IPR011764 Biotin carboxylation domain LIT28_21350 IPR016185 Pre-ATP-grasp domain superfamily LIT28_21350 IPR005481 Biotin carboxylase-like, N-terminal domain LIT28_21350 IPR011761 ATP-grasp fold LIT28_21350 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LIT28_21350 IPR011054 Rudiment single hybrid motif LIT28_21350 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase LIT28_21355 IPR001249 Acetyl-CoA biotin carboxyl carrier LIT28_21355 IPR000089 Biotin/lipoyl attachment LIT28_21355 IPR011053 Single hybrid motif LIT28_21355 IPR001882 Biotin-binding site LIT28_21365 IPR024232 Stage III sporulation protein AH-like LIT28_21365 IPR038503 Stage III sporulation protein AH-like superfamily LIT28_21370 IPR014195 Sporulation stage III, protein AG LIT28_21375 IPR014245 Sporulation stage III, protein AF LIT28_21380 IPR014194 Sporulation stage III, protein AE LIT28_21385 IPR014211 Stage III sporulation protein AD LIT28_21385 IPR025664 Stage III sporulation protein AC/AD family LIT28_21390 IPR025664 Stage III sporulation protein AC/AD family LIT28_21390 IPR009570 Stage III sporulation protein AC LIT28_21395 IPR014198 Stage III sporulation protein AB LIT28_21400 IPR003593 AAA+ ATPase domain LIT28_21400 IPR014217 Sporulation stage III, protein AA LIT28_21400 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21415 IPR012340 Nucleic acid-binding, OB-fold LIT28_21415 IPR008991 Translation protein SH3-like domain superfamily LIT28_21415 IPR011768 Translation elongation factor P LIT28_21415 IPR013852 Translation elongation factor P/YeiP, conserved site LIT28_21415 IPR001059 Translation elongation factor P/YeiP, central LIT28_21415 IPR013185 Translation elongation factor, KOW-like LIT28_21415 IPR015365 Elongation factor P, C-terminal LIT28_21415 IPR014722 Ribosomal protein L2, domain 2 LIT28_21415 IPR020599 Translation elongation factor P/YeiP LIT28_21420 IPR000587 Creatinase, N-terminal LIT28_21420 IPR001714 Peptidase M24, methionine aminopeptidase LIT28_21420 IPR000994 Peptidase M24 LIT28_21420 IPR036005 Creatinase/aminopeptidase-like LIT28_21420 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LIT28_21420 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LIT28_21425 IPR001874 Dehydroquinase, class II LIT28_21425 IPR018509 Dehydroquinase, class II, conserved site LIT28_21425 IPR036441 Dehydroquinase, class II superfamily LIT28_21430 IPR024563 Uncharacterised protein family YqhR LIT28_21435 IPR010787 Protein of unknown function DUF1385 LIT28_21445 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_21445 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_21445 IPR006439 HAD hydrolase, subfamily IA LIT28_21445 IPR023214 HAD superfamily LIT28_21445 IPR036412 HAD-like superfamily LIT28_21450 IPR001367 Iron dependent repressor, metal binding and dimerisation domain LIT28_21450 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily LIT28_21450 IPR022897 HTH-type transcription regulator MntR LIT28_21450 IPR022689 Iron dependent repressor LIT28_21450 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_21450 IPR036390 Winged helix DNA-binding domain superfamily LIT28_21450 IPR022687 DTXR-type HTH domain LIT28_21455 IPR034560 Spore photoproduct lyase, Bacilli type LIT28_21455 IPR023897 Spore photoproduct lyase LIT28_21480 IPR024898 Octanoyltransferase LipM LIT28_21480 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LIT28_21485 IPR001763 Rhodanese-like domain LIT28_21485 IPR036873 Rhodanese-like domain superfamily LIT28_21495 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_21495 IPR028082 Periplasmic binding protein-like I LIT28_21495 IPR001761 Periplasmic binding protein/LacI sugar binding domain LIT28_21495 IPR000843 LacI-type HTH domain LIT28_21505 IPR000390 Small multidrug resistance protein family LIT28_21510 IPR000390 Small multidrug resistance protein family LIT28_21545 IPR003593 AAA+ ATPase domain LIT28_21545 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21545 IPR017871 ABC transporter, conserved site LIT28_21545 IPR003439 ABC transporter-like LIT28_21550 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_21550 IPR000524 Transcription regulator HTH, GntR LIT28_21550 IPR036390 Winged helix DNA-binding domain superfamily LIT28_21565 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 LIT28_21565 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_21565 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_21565 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_21565 IPR020581 Glycine cleavage system P protein LIT28_21570 IPR020581 Glycine cleavage system P protein LIT28_21570 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_21570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_21570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_21570 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 LIT28_21575 IPR006223 Glycine cleavage system T protein LIT28_21575 IPR022903 Glycine cleavage system T protein, bacteria LIT28_21575 IPR028896 Aminomethyltransferase-like LIT28_21575 IPR006222 Aminomethyltransferase, folate-binding domain LIT28_21575 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal LIT28_21575 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 LIT28_21575 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain LIT28_21580 IPR038718 SNF2-like, N-terminal domain superfamily LIT28_21580 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_21580 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21580 IPR001650 Helicase, C-terminal LIT28_21580 IPR000330 SNF2-related, N-terminal domain LIT28_21585 IPR024562 Uncharacterised protein family YqhG LIT28_21605 IPR025622 YqzE-like protein LIT28_21610 IPR031322 Shikimate kinase/gluconokinase LIT28_21610 IPR000623 Shikimate kinase/Threonine synthase-like 1 LIT28_21610 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21645 IPR003004 GspF/PilC family LIT28_21645 IPR001992 Type II secretion system conserved site LIT28_21645 IPR018076 Type II secretion system F domain LIT28_21645 IPR042094 Type II secretion system F domain superfamily LIT28_21650 IPR001482 Type II/IV secretion system protein LIT28_21650 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21650 IPR003593 AAA+ ATPase domain LIT28_21660 IPR020254 Protein of unknown function DUF2626 LIT28_21665 IPR001991 Sodium:dicarboxylate symporter LIT28_21665 IPR036458 Sodium:dicarboxylate symporter superfamily LIT28_21700 IPR006009 N-acetylglucosaminyltransferase, MurG LIT28_21700 IPR007235 Glycosyl transferase, family 28, C-terminal LIT28_21700 IPR004276 Glycosyltransferase family 28, N-terminal domain LIT28_21705 IPR036594 Methionine synthase domain LIT28_21705 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LIT28_21705 IPR000489 Pterin-binding domain LIT28_21705 IPR004223 Vitamin B12-dependent methionine synthase, activation domain LIT28_21705 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily LIT28_21705 IPR011822 Cobalamin-dependent methionine synthase LIT28_21705 IPR033706 Methionine synthase, B12-binding domain LIT28_21705 IPR036589 Homocysteine-binding domain superfamily LIT28_21705 IPR006158 Cobalamin (vitamin B12)-binding domain LIT28_21705 IPR011005 Dihydropteroate synthase-like LIT28_21705 IPR036724 Cobalamin-binding domain superfamily LIT28_21705 IPR003726 Homocysteine-binding domain LIT28_21710 IPR003171 Methylenetetrahydrofolate reductase LIT28_21710 IPR036589 Homocysteine-binding domain superfamily LIT28_21710 IPR003726 Homocysteine-binding domain LIT28_21710 IPR029041 FAD-linked oxidoreductase-like LIT28_21715 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_21715 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LIT28_21715 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_21715 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_21720 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LIT28_21720 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_21720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_21720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_21730 IPR036390 Winged helix DNA-binding domain superfamily LIT28_21730 IPR011991 ArsR-like helix-turn-helix domain LIT28_21730 IPR001845 HTH ArsR-type DNA-binding domain LIT28_21730 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_21740 IPR001279 Metallo-beta-lactamase LIT28_21740 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_21745 IPR024490 Protein of unknown function DUF2759 LIT28_21750 IPR000600 ROK family LIT28_21750 IPR004654 Glucokinase ROK LIT28_21755 IPR023164 YqgQ-like superfamily LIT28_21755 IPR009256 Protein of unknown function DUF910 LIT28_21760 IPR002698 5-formyltetrahydrofolate cyclo-ligase LIT28_21760 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily LIT28_21760 IPR037171 NagB/RpiA transferase-like LIT28_21765 IPR011332 Zinc-binding ribosomal protein LIT28_21765 IPR018264 Ribosomal protein L33, conserved site LIT28_21765 IPR001705 Ribosomal protein L33 LIT28_21765 IPR038584 Ribosomal protein L33 superfamily LIT28_21770 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_21770 IPR005835 Nucleotidyl transferase domain LIT28_21770 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria LIT28_21775 IPR026022 PhoU domain LIT28_21775 IPR038078 PhoU-like domain superfamily LIT28_21775 IPR028366 Phosphate transport system protein PhoU LIT28_21780 IPR005670 Phosphate transport system permease protein 1 LIT28_21780 IPR017871 ABC transporter, conserved site LIT28_21780 IPR015850 ABC transporter, phosphate import, PstB LIT28_21780 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21780 IPR003593 AAA+ ATPase domain LIT28_21780 IPR003439 ABC transporter-like LIT28_21785 IPR005672 Phosphate transport system permease protein PstA LIT28_21785 IPR035906 MetI-like superfamily LIT28_21785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_21790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_21790 IPR011864 Phosphate ABC transporter, permease protein PstC LIT28_21790 IPR035906 MetI-like superfamily LIT28_21795 IPR024370 PBP domain LIT28_21795 IPR011862 Phosphate binding protein LIT28_21800 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_21800 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_21800 IPR001460 Penicillin-binding protein, transpeptidase LIT28_21800 IPR012338 Beta-lactamase/transpeptidase-like LIT28_21805 IPR011701 Major facilitator superfamily LIT28_21805 IPR036259 MFS transporter superfamily LIT28_21810 IPR019833 Manganese/iron superoxide dismutase, binding site LIT28_21810 IPR019831 Manganese/iron superoxide dismutase, N-terminal LIT28_21810 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily LIT28_21810 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily LIT28_21810 IPR019832 Manganese/iron superoxide dismutase, C-terminal LIT28_21810 IPR001189 Manganese/iron superoxide dismutase LIT28_21830 IPR011005 Dihydropteroate synthase-like LIT28_21830 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type LIT28_21830 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial LIT28_21835 IPR036390 Winged helix DNA-binding domain superfamily LIT28_21835 IPR002481 Ferric-uptake regulator LIT28_21835 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_21840 IPR037294 ABC transporter, BtuC-like LIT28_21840 IPR001626 ABC transporter, TroCD-like LIT28_21845 IPR003439 ABC transporter-like LIT28_21845 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21845 IPR003593 AAA+ ATPase domain LIT28_21845 IPR017871 ABC transporter, conserved site LIT28_21850 IPR019264 Domain of unknown function DUF2179 LIT28_21850 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_21850 IPR003740 Uncharacterised membrane protein YitT LIT28_21855 IPR020277 Protein of unknown function DUF2624 LIT28_21860 IPR018246 AP endonuclease 2, zinc binding site LIT28_21860 IPR036237 Xylose isomerase-like superfamily LIT28_21860 IPR013022 Xylose isomerase-like, TIM barrel domain LIT28_21860 IPR001719 AP endonuclease 2 LIT28_21865 IPR030881 DEAD-box ATP-dependent RNA helicase CshB LIT28_21865 IPR011545 DEAD/DEAH box helicase domain LIT28_21865 IPR014014 RNA helicase, DEAD-box type, Q motif LIT28_21865 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21865 IPR001650 Helicase, C-terminal LIT28_21865 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_21875 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LIT28_21880 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_21880 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily LIT28_21880 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LIT28_21880 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria LIT28_21885 IPR006901 tRNA methyltransferase TrmK LIT28_21885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_21890 IPR012218 Cytochrome c, Bacillus subtilis c550-related LIT28_21890 IPR036909 Cytochrome c-like domain superfamily LIT28_21890 IPR009056 Cytochrome c-like domain LIT28_21895 IPR007627 RNA polymerase sigma-70 region 2 LIT28_21895 IPR009042 RNA polymerase sigma-70 region 1.2 LIT28_21895 IPR000943 RNA polymerase sigma-70 LIT28_21895 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_21895 IPR014284 RNA polymerase sigma-70 like domain LIT28_21895 IPR007127 RNA polymerase sigma factor 70, region 1.1 LIT28_21895 IPR042189 Sigma-70 factor, region 1.1 superfamily LIT28_21895 IPR013325 RNA polymerase sigma factor, region 2 LIT28_21895 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_21895 IPR012760 RNA polymerase sigma factor RpoD, C-terminal LIT28_21895 IPR028630 RNA polymerase sigma factor RpoD LIT28_21895 IPR007624 RNA polymerase sigma-70 region 3 LIT28_21895 IPR007630 RNA polymerase sigma-70 region 4 LIT28_21900 IPR002694 Zinc finger, CHC2-type LIT28_21900 IPR006295 DNA primase, DnaG LIT28_21900 IPR036977 DNA Primase, CHC2-type zinc finger LIT28_21900 IPR030846 DNA primase DnaG, bacteria LIT28_21900 IPR034151 Bacterial DnaG primase, TOPRIM domain LIT28_21900 IPR006171 TOPRIM domain LIT28_21900 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily LIT28_21900 IPR013264 DNA primase, catalytic core, N-terminal LIT28_21900 IPR019475 DNA primase, DnaB-helicase binding domain LIT28_21900 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily LIT28_21900 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LIT28_21905 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein LIT28_21905 IPR005177 Bifunctional kinase-pyrophosphorylase LIT28_21910 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_21910 IPR016842 Protein of unknown function UCP026546, HtH-CBS LIT28_21910 IPR013196 Helix-turn-helix, type 11 LIT28_21910 IPR000644 CBS domain LIT28_21910 IPR036390 Winged helix DNA-binding domain superfamily LIT28_21915 IPR037278 ARFGAP/RecO-like zinc finger LIT28_21915 IPR022572 DNA replication/recombination mediator RecO, N-terminal LIT28_21915 IPR012340 Nucleic acid-binding, OB-fold LIT28_21915 IPR042242 Recombination protein O, zinc-binding domain LIT28_21915 IPR003717 Recombination protein O, RecO LIT28_21925 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21925 IPR004044 K Homology domain, type 2 LIT28_21925 IPR015946 K homology domain-like, alpha/beta LIT28_21925 IPR006073 GTP binding domain LIT28_21925 IPR005662 GTP-binding protein Era LIT28_21925 IPR009019 K homology domain superfamily, prokaryotic type LIT28_21925 IPR030388 Era-type guanine nucleotide-binding (G) domain LIT28_21925 IPR005225 Small GTP-binding protein domain LIT28_21930 IPR002125 Cytidine and deoxycytidylate deaminase domain LIT28_21930 IPR016193 Cytidine deaminase-like LIT28_21930 IPR006262 Cytidine deaminase, homotetrameric LIT28_21930 IPR016192 APOBEC/CMP deaminase, zinc-binding LIT28_21935 IPR000829 DAGK family LIT28_21935 IPR036945 Diacylglycerol kinase (DAGK) superfamily LIT28_21935 IPR033717 Undecaprenol kinase LIT28_21940 IPR023091 Metalloprotease catalytic domain superfamily, predicted LIT28_21940 IPR002036 Endoribonuclease YbeY LIT28_21940 IPR020549 Endoribonuclease YbeY, conserved site LIT28_21945 IPR006674 HD domain LIT28_21945 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain LIT28_21945 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain LIT28_21945 IPR003607 HD/PDEase domain LIT28_21945 IPR006675 HDIG domain LIT28_21950 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_21950 IPR003714 PhoH-like protein LIT28_21955 IPR010690 Putative stage IV sporulation YqfD LIT28_21960 IPR022477 Sporulation protein YqfC LIT28_21960 IPR022476 Sporulation protein YabP/YqfC LIT28_21965 IPR042184 YqeY/Aim41, N-terminal domain LIT28_21965 IPR019004 Uncharacterised protein YqeY/Aim41 LIT28_21965 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 LIT28_21965 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like LIT28_21970 IPR038380 Ribosomal protein S21 superfamily LIT28_21970 IPR018278 Ribosomal protein S21, conserved site LIT28_21970 IPR001911 Ribosomal protein S21 LIT28_21975 IPR013848 Methylthiotransferase, N-terminal LIT28_21975 IPR002792 TRAM domain LIT28_21975 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase LIT28_21975 IPR007197 Radical SAM LIT28_21975 IPR006467 MiaB-like tRNA modifying enzyme LIT28_21975 IPR038135 Methylthiotransferase, N-terminal domain superfamily LIT28_21975 IPR020612 Methylthiotransferase, conserved site LIT28_21975 IPR005839 Methylthiotransferase LIT28_21975 IPR006638 Elp3/MiaB/NifB LIT28_21975 IPR023404 Radical SAM, alpha/beta horseshoe LIT28_21980 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIT28_21980 IPR006700 Ribosomal RNA small subunit methyltransferase E LIT28_21980 IPR015947 PUA-like superfamily LIT28_21980 IPR029028 Alpha/beta knot methyltransferases LIT28_21985 IPR004498 Ribosomal protein L11 methyltransferase LIT28_21985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_21990 IPR002939 Chaperone DnaJ, C-terminal LIT28_21990 IPR001623 DnaJ domain LIT28_21990 IPR018253 DnaJ domain, conserved site LIT28_21990 IPR008971 HSP40/DnaJ peptide-binding LIT28_21990 IPR001305 Heat shock protein DnaJ, cysteine-rich domain LIT28_21990 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily LIT28_21990 IPR036869 Chaperone J-domain superfamily LIT28_21990 IPR012724 Chaperone DnaJ LIT28_21995 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily LIT28_21995 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily LIT28_21995 IPR013126 Heat shock protein 70 family LIT28_21995 IPR018181 Heat shock protein 70, conserved site LIT28_21995 IPR012725 Chaperone DnaK LIT28_22000 IPR000740 GrpE nucleotide exchange factor LIT28_22000 IPR013805 GrpE nucleotide exchange factor, coiled-coil LIT28_22000 IPR009012 GrpE nucleotide exchange factor, head LIT28_22005 IPR029016 GAF-like domain superfamily LIT28_22005 IPR002571 Heat-inducible transcription repressor HrcA LIT28_22005 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal LIT28_22005 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22005 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily LIT28_22005 IPR036390 Winged helix DNA-binding domain superfamily LIT28_22010 IPR023404 Radical SAM, alpha/beta horseshoe LIT28_22010 IPR007197 Radical SAM LIT28_22010 IPR034505 Anaerobic coproporphyrinogen-III oxidase LIT28_22010 IPR006638 Elp3/MiaB/NifB LIT28_22010 IPR010723 HemN, C-terminal LIT28_22010 IPR004559 Heme chaperone HemW-like LIT28_22015 IPR002577 Helix-turn-helix, HxlR type LIT28_22015 IPR036390 Winged helix DNA-binding domain superfamily LIT28_22015 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22020 IPR006297 Elongation factor 4 LIT28_22020 IPR035647 EF-G domain III/V-like LIT28_22020 IPR005225 Small GTP-binding protein domain LIT28_22020 IPR004161 Translation elongation factor EFTu-like, domain 2 LIT28_22020 IPR038363 LepA, C-terminal domain superfamily LIT28_22020 IPR013842 GTP-binding protein LepA, C-terminal LIT28_22020 IPR035654 Elongation factor 4, domain IV LIT28_22020 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22020 IPR000640 Elongation factor EFG, domain V-like LIT28_22020 IPR031157 Tr-type G domain, conserved site LIT28_22020 IPR000795 Transcription factor, GTP-binding domain LIT28_22030 IPR005080 Peptidase A25, germination protease LIT28_22030 IPR023430 Peptidase HybD-like domain superfamily LIT28_22035 IPR036510 Ribosomal protein S20 superfamily LIT28_22035 IPR002583 Ribosomal protein S20 LIT28_22040 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22040 IPR005790 DNA polymerase III, delta subunit LIT28_22040 IPR010372 DNA polymerase III delta, N-terminal LIT28_22040 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LIT28_22045 IPR025416 YqzM-like protein LIT28_22050 IPR004477 ComEC/Rec2-related protein LIT28_22050 IPR035681 ComA-like, MBL domain LIT28_22050 IPR025405 Domain of unknown function DUF4131 LIT28_22050 IPR001279 Metallo-beta-lactamase LIT28_22050 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_22050 IPR004797 Competence protein ComEC/Rec2 LIT28_22055 IPR035105 Deoxycytidylate deaminase domain LIT28_22055 IPR015517 Deoxycytidylate deaminase-related LIT28_22055 IPR016193 Cytidine deaminase-like LIT28_22055 IPR013404 Competence operon E, ComEB LIT28_22055 IPR002125 Cytidine and deoxycytidylate deaminase domain LIT28_22055 IPR016192 APOBEC/CMP deaminase, zinc-binding LIT28_22060 IPR010994 RuvA domain 2-like LIT28_22060 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LIT28_22060 IPR004509 Competence protein ComEA, helix-hairpin-helix domain LIT28_22060 IPR004787 Competence protein ComEA LIT28_22060 IPR019554 Soluble ligand binding domain LIT28_22065 IPR000304 Pyrroline-5-carboxylate reductase LIT28_22065 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain LIT28_22065 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LIT28_22065 IPR036291 NAD(P)-binding domain superfamily LIT28_22065 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_22070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_22070 IPR041698 Methyltransferase domain 25 LIT28_22075 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LIT28_22080 IPR005249 Conserved hypothetical protein CHP00488 LIT28_22080 IPR003607 HD/PDEase domain LIT28_22080 IPR006674 HD domain LIT28_22085 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase LIT28_22085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_22085 IPR004821 Cytidyltransferase-like domain LIT28_22090 IPR035920 YhbY-like superfamily LIT28_22090 IPR017924 RNA-binding protein YhbY LIT28_22090 IPR001890 RNA-binding, CRM domain LIT28_22095 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LIT28_22095 IPR022893 Shikimate dehydrogenase family LIT28_22095 IPR011342 Shikimate dehydrogenase LIT28_22095 IPR041121 SDH, C-terminal LIT28_22095 IPR036291 NAD(P)-binding domain superfamily LIT28_22095 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal LIT28_22100 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22100 IPR006073 GTP binding domain LIT28_22100 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH LIT28_22100 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain LIT28_22105 IPR036412 HAD-like superfamily LIT28_22105 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LIT28_22105 IPR023214 HAD superfamily LIT28_22105 IPR010021 HAD-superfamily phosphatase, YqeG-like LIT28_22105 IPR006439 HAD hydrolase, subfamily IA LIT28_22115 IPR003817 Phosphatidylserine decarboxylase-related LIT28_22115 IPR033177 Phosphatidylserine decarboxylase LIT28_22115 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 LIT28_22120 IPR014284 RNA polymerase sigma-70 like domain LIT28_22120 IPR000943 RNA polymerase sigma-70 LIT28_22120 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_22120 IPR014209 RNA polymerase sigma-K type LIT28_22120 IPR007627 RNA polymerase sigma-70 region 2 LIT28_22120 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22120 IPR013325 RNA polymerase sigma factor, region 2 LIT28_22120 IPR007630 RNA polymerase sigma-70 region 4 LIT28_22135 IPR001705 Ribosomal protein L33 LIT28_22135 IPR018264 Ribosomal protein L33, conserved site LIT28_22135 IPR011332 Zinc-binding ribosomal protein LIT28_22135 IPR038584 Ribosomal protein L33 superfamily LIT28_22140 IPR029479 Nitroreductase LIT28_22140 IPR000415 Nitroreductase-like LIT28_22145 IPR007685 RelA/SpoT LIT28_22155 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIT28_22155 IPR001952 Alkaline phosphatase LIT28_22155 IPR018299 Alkaline phosphatase, active site LIT28_22165 IPR029058 Alpha/Beta hydrolase fold LIT28_22165 IPR000073 Alpha/beta hydrolase fold-1 LIT28_22165 IPR000639 Epoxide hydrolase-like LIT28_22165 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal LIT28_22200 IPR023827 Peptidase S8, subtilisin, Asp-active site LIT28_22200 IPR036852 Peptidase S8/S53 domain superfamily LIT28_22200 IPR000209 Peptidase S8/S53 domain LIT28_22200 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily LIT28_22200 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 LIT28_22200 IPR034213 Vpr-like peptidase, catalytic domain LIT28_22200 IPR015500 Peptidase S8, subtilisin-related LIT28_22200 IPR023828 Peptidase S8, subtilisin, Ser-active site LIT28_22200 IPR022398 Peptidase S8, subtilisin, His-active site LIT28_22200 IPR025965 FlgD Ig-like domain LIT28_22200 IPR003137 PA domain LIT28_22205 IPR001273 Aromatic amino acid hydroxylase LIT28_22205 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site LIT28_22205 IPR036951 Aromatic amino acid hydroxylase superfamily LIT28_22205 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily LIT28_22205 IPR005960 Phenylalanine-4-hydroxylase, monomeric form LIT28_22205 IPR019774 Aromatic amino acid hydroxylase, C-terminal LIT28_22210 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily LIT28_22210 IPR001533 Pterin 4 alpha carbinolamine dehydratase LIT28_22215 IPR025948 HTH-like domain LIT28_22215 IPR036397 Ribonuclease H superfamily LIT28_22215 IPR012337 Ribonuclease H-like superfamily LIT28_22215 IPR001584 Integrase, catalytic core LIT28_22215 IPR038965 Transposase InsF-like LIT28_22225 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_22225 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_22225 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_22225 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II LIT28_22230 IPR032808 DoxX family LIT28_22260 IPR017871 ABC transporter, conserved site LIT28_22260 IPR003593 AAA+ ATPase domain LIT28_22260 IPR003439 ABC transporter-like LIT28_22260 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22265 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_22265 IPR037294 ABC transporter, BtuC-like LIT28_22270 IPR002491 ABC transporter periplasmic binding domain LIT28_22275 IPR025418 YrhC-like protein LIT28_22280 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain LIT28_22280 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LIT28_22280 IPR039697 Iron-type alcohol dehydrogenase-like LIT28_22280 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_22280 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_22280 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_22280 IPR015590 Aldehyde dehydrogenase domain LIT28_22280 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase LIT28_22280 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LIT28_22285 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_22285 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_22285 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LIT28_22285 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_22290 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site LIT28_22290 IPR001926 Pyridoxal-phosphate dependent enzyme LIT28_22290 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIT28_22295 IPR010049 MTA/SAH nucleosidase LIT28_22295 IPR000845 Nucleoside phosphorylase domain LIT28_22295 IPR035994 Nucleoside phosphorylase superfamily LIT28_22300 IPR013216 Methyltransferase type 11 LIT28_22300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_22300 IPR023553 Uncharacterised methyltransferase, YrrT LIT28_22315 IPR012338 Beta-lactamase/transpeptidase-like LIT28_22315 IPR005311 Penicillin-binding protein, dimerisation domain LIT28_22315 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIT28_22315 IPR001460 Penicillin-binding protein, transpeptidase LIT28_22320 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily LIT28_22320 IPR006359 Transcription elongation factor GreA LIT28_22320 IPR023459 Transcription elongation factor GreA/GreB family LIT28_22320 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal LIT28_22320 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily LIT28_22320 IPR018151 Transcription elongation factor, GreA/GreB, conserved site LIT28_22320 IPR028624 Transcription elongation factor GreA/GreB LIT28_22320 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal LIT28_22325 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22325 IPR000764 Uridine kinase-like LIT28_22325 IPR006083 Phosphoribulokinase/uridine kinase LIT28_22325 IPR026008 Uridine kinase LIT28_22330 IPR032525 Peptidase family U32, C-terminal LIT28_22330 IPR001539 Peptidase U32 LIT28_22335 IPR001539 Peptidase U32 LIT28_22340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_22340 IPR002935 Class I-like SAM-dependent O-methyltransferase LIT28_22345 IPR003770 Endolytic murein transglycosylase LIT28_22350 IPR009711 Uncharacterised protein family UPF0473 LIT28_22355 IPR012337 Ribonuclease H-like superfamily LIT28_22355 IPR005227 Putative pre-16S rRNA nuclease LIT28_22355 IPR037027 YqgF/RNase H-like domain superfamily LIT28_22355 IPR006641 YqgF/RNase H-like domain LIT28_22360 IPR009309 IreB regulatory phosphoprotein LIT28_22365 IPR002318 Alanine-tRNA ligase, class IIc LIT28_22365 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LIT28_22365 IPR009000 Translation protein, beta-barrel domain superfamily LIT28_22365 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily LIT28_22365 IPR003156 DHHA1 domain LIT28_22365 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LIT28_22365 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal LIT28_22365 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria LIT28_22365 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain LIT28_22375 IPR002549 Transmembrane protein TqsA-like LIT28_22395 IPR027785 UvrD-like helicase C-terminal domain LIT28_22395 IPR003593 AAA+ ATPase domain LIT28_22395 IPR006345 RecD-like DNA helicase LIT28_22395 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22395 IPR029493 RecD helicase-like helix-hairpin-helix domain LIT28_22395 IPR041451 RecD-like DNA helicase, SH3 domain LIT28_22405 IPR004506 tRNA-specific 2-thiouridylase LIT28_22405 IPR023382 Adenine nucleotide alpha hydrolase-like domains LIT28_22405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_22410 IPR000192 Aminotransferase class V domain LIT28_22410 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LIT28_22410 IPR016454 Cysteine desulfurase LIT28_22410 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_22410 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_22410 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_22415 IPR030489 Transcription regulator Rrf2-type, conserved site LIT28_22415 IPR000944 Transcription regulator Rrf2-type LIT28_22415 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22415 IPR036390 Winged helix DNA-binding domain superfamily LIT28_22420 IPR008824 RuvB-like P-loop domain LIT28_22420 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22420 IPR021886 MgsA AAA+ ATPase C-terminal LIT28_22420 IPR032423 AAA C-terminal domain LIT28_22420 IPR003593 AAA+ ATPase domain LIT28_22420 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LIT28_22425 IPR014243 Transcription factor, RsfA LIT28_22425 IPR017877 Myb-like domain LIT28_22430 IPR000594 THIF-type NAD/FAD binding fold LIT28_22430 IPR035985 Ubiquitin-activating enzyme LIT28_22435 IPR029351 GAD domain LIT28_22435 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LIT28_22435 IPR012340 Nucleic acid-binding, OB-fold LIT28_22435 IPR004115 GAD-like domain superfamily LIT28_22435 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb LIT28_22435 IPR004524 Aspartate-tRNA ligase, type 1 LIT28_22435 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_22435 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LIT28_22440 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_22440 IPR004154 Anticodon-binding LIT28_22440 IPR036621 Anticodon-binding domain superfamily LIT28_22440 IPR015807 Histidine-tRNA ligase LIT28_22440 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain LIT28_22440 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit LIT28_22440 IPR033656 Histidyl-anticodon-binding LIT28_22460 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily LIT28_22460 IPR003732 D-aminoacyl-tRNA deacylase DTD LIT28_22465 IPR002912 ACT domain LIT28_22465 IPR012675 Beta-grasp domain superfamily LIT28_22465 IPR003607 HD/PDEase domain LIT28_22465 IPR004811 RelA/SpoT family LIT28_22465 IPR007685 RelA/SpoT LIT28_22465 IPR004095 TGS LIT28_22465 IPR012676 TGS-like LIT28_22465 IPR033655 RelA, TGS domain LIT28_22470 IPR000836 Phosphoribosyltransferase domain LIT28_22470 IPR005764 Adenine phosphoribosyl transferase LIT28_22470 IPR029057 Phosphoribosyltransferase-like LIT28_22475 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal LIT28_22475 IPR004610 Bacterial RecJ exonuclease LIT28_22475 IPR041122 RecJ, OB domain LIT28_22475 IPR038763 DHH phosphoesterase superfamily LIT28_22475 IPR003156 DHHA1 domain LIT28_22475 IPR001667 DDH domain LIT28_22480 IPR002524 Cation efflux protein LIT28_22480 IPR027470 Cation efflux protein, cytoplasmic domain LIT28_22480 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LIT28_22480 IPR027469 Cation efflux transmembrane domain superfamily LIT28_22485 IPR005791 Protein translocase subunit SecD LIT28_22485 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LIT28_22485 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LIT28_22485 IPR005665 Protein-export membrane protein SecF, bacterial LIT28_22485 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LIT28_22495 IPR014249 Sporulation stage V protein B LIT28_22495 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type LIT28_22495 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LIT28_22495 IPR002797 Polysaccharide biosynthesis protein LIT28_22500 IPR023090 UPF0702, alpha/beta domain superfamily LIT28_22500 IPR007353 Protein of unknown function DUF421 LIT28_22510 IPR003849 Preprotein translocase YajC LIT28_22515 IPR004803 tRNA-guanine transglycosylase LIT28_22515 IPR036511 Queuine tRNA-ribosyltransferase-like LIT28_22515 IPR002616 tRNA-guanine(15) transglycosylase-like LIT28_22520 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA LIT28_22520 IPR042118 QueA, domain 1 LIT28_22520 IPR042119 QueA, domain 2 LIT28_22520 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily LIT28_22525 IPR021320 Protein of unknown function DUF2905 LIT28_22530 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22530 IPR008824 RuvB-like P-loop domain LIT28_22530 IPR008823 RuvB C-terminal winged helix domain LIT28_22530 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22530 IPR036390 Winged helix DNA-binding domain superfamily LIT28_22530 IPR004605 DNA helicase, Holliday junction RuvB-type LIT28_22530 IPR003593 AAA+ ATPase domain LIT28_22530 IPR041445 RuvB, AAA lid domain LIT28_22535 IPR036267 RuvA, C-terminal domain superfamily LIT28_22535 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial LIT28_22535 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LIT28_22535 IPR012340 Nucleic acid-binding, OB-fold LIT28_22535 IPR000085 Bacterial DNA recombination protein RuvA LIT28_22535 IPR010994 RuvA domain 2-like LIT28_22535 IPR011114 Holliday junction DNA helicase RuvA, C-terminal LIT28_22540 IPR002491 ABC transporter periplasmic binding domain LIT28_22560 IPR036779 LysM domain superfamily LIT28_22560 IPR014248 Spore coat assembly protein SafA LIT28_22560 IPR018392 LysM domain LIT28_22565 IPR003473 Quinolinate synthetase A LIT28_22565 IPR036094 Quinolinate synthetase A superfamily LIT28_22565 IPR023515 Quinolinate synthase A, type 3 LIT28_22570 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily LIT28_22570 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal LIT28_22570 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal LIT28_22570 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal LIT28_22570 IPR004393 Nicotinate-nucleotide pyrophosphorylase LIT28_22570 IPR013785 Aldolase-type TIM barrel LIT28_22570 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD LIT28_22575 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LIT28_22575 IPR005288 L-aspartate oxidase LIT28_22575 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LIT28_22575 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LIT28_22575 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_22575 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LIT28_22580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_22580 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_22580 IPR016454 Cysteine desulfurase LIT28_22580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_22580 IPR000192 Aminotransferase class V domain LIT28_22580 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LIT28_22585 IPR035922 3H domain superfamily LIT28_22585 IPR004173 3H domain LIT28_22585 IPR013196 Helix-turn-helix, type 11 LIT28_22585 IPR026043 Transcription repressor NadR LIT28_22585 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22585 IPR036390 Winged helix DNA-binding domain superfamily LIT28_22590 IPR005302 Molybdenum cofactor sulfurase, C-terminal LIT28_22590 IPR005163 3-alpha domain LIT28_22590 IPR011037 Pyruvate kinase-like, insert domain superfamily LIT28_22595 IPR001086 Prephenate dehydratase LIT28_22595 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase LIT28_22595 IPR018528 Prephenate dehydratase, conserved site LIT28_22595 IPR002912 ACT domain LIT28_22600 IPR003838 ABC transporter permease protein domain LIT28_22600 IPR027022 ABC transporter permease protein, BceB-type LIT28_22605 IPR003838 ABC transporter permease protein domain LIT28_22605 IPR027022 ABC transporter permease protein, BceB-type LIT28_22610 IPR003593 AAA+ ATPase domain LIT28_22610 IPR017871 ABC transporter, conserved site LIT28_22610 IPR003439 ABC transporter-like LIT28_22610 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_22615 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_22615 IPR005467 Histidine kinase domain LIT28_22615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_22620 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22620 IPR039420 Transcriptional regulatory protein WalR-like LIT28_22620 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_22620 IPR001789 Signal transduction response regulator, receiver domain LIT28_22620 IPR011006 CheY-like superfamily LIT28_22620 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_22625 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22625 IPR031167 OBG-type guanine nucleotide-binding (G) domain LIT28_22625 IPR035101 GTP-binding protein, Obg-type LIT28_22625 IPR014100 GTP-binding protein Obg/CgtA LIT28_22625 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily LIT28_22625 IPR006074 GTP1/OBG, conserved site LIT28_22625 IPR006169 GTP1/OBG domain LIT28_22625 IPR036726 GTP1/OBG domain superfamily LIT28_22625 IPR006073 GTP binding domain LIT28_22625 IPR015349 GTP-binding protein OBG, C-terminal LIT28_22625 IPR005225 Small GTP-binding protein domain LIT28_22630 IPR039506 SpoOB, alpha-helical domain LIT28_22630 IPR016122 Sporulation initiation phosphotransferase B, C-terminal LIT28_22630 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily LIT28_22630 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB LIT28_22635 IPR001684 Ribosomal protein L27 LIT28_22635 IPR018261 Ribosomal protein L27, conserved site LIT28_22640 IPR007422 Cysteine protease Prp LIT28_22640 IPR036764 Cysteine protease Prp superfamily LIT28_22645 IPR036164 L21-like superfamily LIT28_22645 IPR028909 Ribosomal protein L21-like LIT28_22645 IPR001787 Ribosomal protein L21 LIT28_22645 IPR018258 Ribosomal protein L21, conserved site LIT28_22650 IPR003029 S1 domain LIT28_22650 IPR022967 RNA-binding domain, S1 LIT28_22650 IPR004659 Ribonuclease E/G LIT28_22650 IPR012340 Nucleic acid-binding, OB-fold LIT28_22650 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G LIT28_22655 IPR008915 Peptidase M50 LIT28_22660 IPR011055 Duplicated hybrid motif LIT28_22660 IPR016047 Peptidase M23 LIT28_22665 IPR025501 ATP binding protein MinD LIT28_22665 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LIT28_22665 IPR010223 ATP binding protein MinD, bacterial-type LIT28_22665 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22670 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal LIT28_22670 IPR013033 Septum formation inhibitor MinC LIT28_22670 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily LIT28_22670 IPR005526 Septum formation inhibitor MinC, C-terminal LIT28_22680 IPR007221 Rod shape-determining protein MreC LIT28_22680 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 LIT28_22680 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 LIT28_22685 IPR004753 Cell shape determining protein MreB LIT28_22700 IPR018760 Protein of unknown function DUF2326 LIT28_22700 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22700 IPR038729 Rad50/SbcC-type AAA domain LIT28_22710 IPR029052 Metallo-dependent phosphatase-like LIT28_22710 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIT28_22725 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_22725 IPR013762 Integrase-like, catalytic domain superfamily LIT28_22725 IPR002104 Integrase, catalytic domain LIT28_22725 IPR010998 Integrase/recombinase, N-terminal LIT28_22725 IPR004107 Integrase, SAM-like, N-terminal LIT28_22730 IPR037518 MPN domain LIT28_22730 IPR025657 RadC-like JAB domain LIT28_22730 IPR010994 RuvA domain 2-like LIT28_22730 IPR001405 Uncharacterised protein family UPF0758 LIT28_22730 IPR020891 Uncharacterised protein family UPF0758, conserved site LIT28_22735 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein LIT28_22735 IPR029001 Inosine triphosphate pyrophosphatase-like LIT28_22745 IPR001645 Folylpolyglutamate synthetase LIT28_22745 IPR018109 Folylpolyglutamate synthetase, conserved site LIT28_22745 IPR036565 Mur-like, catalytic domain superfamily LIT28_22745 IPR004101 Mur ligase, C-terminal LIT28_22745 IPR036615 Mur ligase, C-terminal domain superfamily LIT28_22745 IPR013221 Mur ligase, central LIT28_22750 IPR002303 Valine-tRNA ligase LIT28_22750 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LIT28_22750 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm LIT28_22750 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LIT28_22750 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIT28_22750 IPR002300 Aminoacyl-tRNA synthetase, class Ia LIT28_22750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_22750 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LIT28_22750 IPR033705 Valyl tRNA synthetase, anticodon-binding domain LIT28_22750 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_22750 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LIT28_22760 IPR018392 LysM domain LIT28_22760 IPR036779 LysM domain superfamily LIT28_22765 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase LIT28_22765 IPR005814 Aminotransferase class-III LIT28_22765 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_22765 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_22765 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_22770 IPR013785 Aldolase-type TIM barrel LIT28_22770 IPR001731 Delta-aminolevulinic acid dehydratase LIT28_22770 IPR030656 Delta-aminolevulinic acid dehydratase, active site LIT28_22775 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase LIT28_22775 IPR039793 Uroporphyrinogen-III synthase LIT28_22775 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily LIT28_22780 IPR000860 Porphobilinogen deaminase LIT28_22780 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site LIT28_22780 IPR022417 Porphobilinogen deaminase, N-terminal LIT28_22780 IPR022418 Porphobilinogen deaminase, C-terminal LIT28_22780 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily LIT28_22785 IPR002541 Cytochrome c assembly protein LIT28_22790 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal LIT28_22790 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase LIT28_22790 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain LIT28_22790 IPR018214 Glutamyl-tRNA reductase, conserved site LIT28_22790 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily LIT28_22790 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily LIT28_22790 IPR036291 NAD(P)-binding domain superfamily LIT28_22790 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LIT28_22795 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22795 IPR036390 Winged helix DNA-binding domain superfamily LIT28_22795 IPR000835 MarR-type HTH domain LIT28_22800 IPR003718 OsmC/Ohr family LIT28_22800 IPR036102 OsmC/Ohr superfamily LIT28_22800 IPR015946 K homology domain-like, alpha/beta LIT28_22800 IPR019953 Organic hydroperoxide resistance protein famiy LIT28_22805 IPR030393 EngB-type guanine nucleotide-binding (G) domain LIT28_22805 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC LIT28_22805 IPR006073 GTP binding domain LIT28_22805 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22810 IPR008269 Peptidase S16, Lon proteolytic domain LIT28_22810 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_22810 IPR015947 PUA-like superfamily LIT28_22810 IPR008268 Peptidase S16, active site LIT28_22810 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22810 IPR003111 Lon, substrate-binding domain LIT28_22810 IPR027065 Lon protease LIT28_22810 IPR004815 Lon protease, bacterial/eukaryotic-type LIT28_22810 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_22810 IPR003959 ATPase, AAA-type, core LIT28_22810 IPR003593 AAA+ ATPase domain LIT28_22810 IPR027543 Lon protease, bacterial LIT28_22815 IPR027065 Lon protease LIT28_22815 IPR008268 Peptidase S16, active site LIT28_22815 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_22815 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_22815 IPR014251 Sporulation protease LonB LIT28_22815 IPR008269 Peptidase S16, Lon proteolytic domain LIT28_22815 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22815 IPR003593 AAA+ ATPase domain LIT28_22815 IPR003959 ATPase, AAA-type, core LIT28_22820 IPR003593 AAA+ ATPase domain LIT28_22820 IPR003959 ATPase, AAA-type, core LIT28_22820 IPR019489 Clp ATPase, C-terminal LIT28_22820 IPR004487 Clp protease, ATP-binding subunit ClpX LIT28_22820 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22820 IPR010603 Zinc finger, ClpX C4-type LIT28_22820 IPR038366 Zinc finger, ClpX C4-type superfamily LIT28_22825 IPR036611 Trigger factor ribosome-binding domain superfamily LIT28_22825 IPR008881 Trigger factor, ribosome-binding, bacterial LIT28_22825 IPR037041 Trigger factor, C-terminal domain superfamily LIT28_22825 IPR008880 Trigger factor, C-terminal LIT28_22825 IPR005215 Trigger factor LIT28_22825 IPR027304 Trigger factor/SurA domain superfamily LIT28_22825 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LIT28_22840 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain LIT28_22840 IPR012544 Bacterial Pleckstrin homology domain LIT28_22840 IPR037063 Bacterial Pleckstrin homology domain superfamily LIT28_22870 IPR000979 Phosphodiesterase MJ0936/Vps29 LIT28_22870 IPR020935 Phosphodiesterase YfcE, conserved site LIT28_22870 IPR041802 YfcE-like, metallophosphatase domain LIT28_22870 IPR029052 Metallo-dependent phosphatase-like LIT28_22870 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type LIT28_22875 IPR020922 dITP/XTP pyrophosphatase LIT28_22875 IPR002637 Ham1-like protein LIT28_22875 IPR029001 Inosine triphosphate pyrophosphatase-like LIT28_22880 IPR015847 Exoribonuclease, phosphorolytic domain 2 LIT28_22880 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_22880 IPR002381 Ribonuclease PH, bacterial-type LIT28_22880 IPR018336 Ribonuclease PH, conserved site LIT28_22880 IPR001247 Exoribonuclease, phosphorolytic domain 1 LIT28_22880 IPR027408 PNPase/RNase PH domain superfamily LIT28_22880 IPR036345 Exoribonuclease, PH domain 2 superfamily LIT28_22885 IPR019606 GerMN domain LIT28_22890 IPR018187 Asp/Glu racemase, active site 1 LIT28_22890 IPR004391 Glutamate racemase LIT28_22890 IPR033134 Asp/Glu racemase, active site 2 LIT28_22890 IPR015942 Asp/Glu/hydantoin racemase LIT28_22890 IPR001920 Asp/Glu racemase LIT28_22905 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22905 IPR000792 Transcription regulator LuxR, C-terminal LIT28_22905 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_22910 IPR006042 Xanthine/uracil permease LIT28_22910 IPR006043 Xanthine/uracil/vitamin C permease LIT28_22920 IPR013108 Amidohydrolase 3 LIT28_22920 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_22920 IPR032466 Metal-dependent hydrolase LIT28_22920 IPR006311 Twin-arginine translocation pathway, signal sequence LIT28_22925 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_22925 IPR006311 Twin-arginine translocation pathway, signal sequence LIT28_22925 IPR013108 Amidohydrolase 3 LIT28_22925 IPR032466 Metal-dependent hydrolase LIT28_22930 IPR000914 Solute-binding protein family 5 domain LIT28_22930 IPR039424 Solute-binding protein family 5 LIT28_22930 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_22935 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_22935 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LIT28_22935 IPR035906 MetI-like superfamily LIT28_22940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_22940 IPR035906 MetI-like superfamily LIT28_22945 IPR003593 AAA+ ATPase domain LIT28_22945 IPR003439 ABC transporter-like LIT28_22945 IPR017871 ABC transporter, conserved site LIT28_22945 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_22945 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22950 IPR003593 AAA+ ATPase domain LIT28_22950 IPR003439 ABC transporter-like LIT28_22950 IPR017871 ABC transporter, conserved site LIT28_22950 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_22950 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIT28_22955 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_22955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_22955 IPR005467 Histidine kinase domain LIT28_22955 IPR010559 Signal transduction histidine kinase, internal region LIT28_22955 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LIT28_22955 IPR029016 GAF-like domain superfamily LIT28_22955 IPR003018 GAF domain LIT28_22960 IPR011006 CheY-like superfamily LIT28_22960 IPR007492 LytTR DNA-binding domain LIT28_22960 IPR001789 Signal transduction response regulator, receiver domain LIT28_22970 IPR007168 Phage shock protein, PspC, N-terminal LIT28_22975 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_22975 IPR014710 RmlC-like jelly roll fold LIT28_22975 IPR011051 RmlC-like cupin domain superfamily LIT28_22975 IPR013096 Cupin 2, conserved barrel LIT28_22975 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_22980 IPR032713 Putative multidrug resistance efflux transporter LIT28_22985 IPR022357 Major intrinsic protein, conserved site LIT28_22985 IPR023743 Aquaporin Z LIT28_22985 IPR034294 Aquaporin transporter LIT28_22985 IPR023271 Aquaporin-like LIT28_22985 IPR000425 Major intrinsic protein LIT28_22990 IPR000944 Transcription regulator Rrf2-type LIT28_22990 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_22990 IPR036390 Winged helix DNA-binding domain superfamily LIT28_23000 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_23000 IPR025302 Domain of unknown function DUF4162 LIT28_23000 IPR003439 ABC transporter-like LIT28_23000 IPR003593 AAA+ ATPase domain LIT28_23000 IPR017871 ABC transporter, conserved site LIT28_23005 IPR005519 Acid phosphatase, class B-like LIT28_23005 IPR036412 HAD-like superfamily LIT28_23005 IPR023214 HAD superfamily LIT28_23005 IPR006423 5-nucleotidase lipoprotein e(P4) LIT28_23010 IPR036737 OmpA-like domain superfamily LIT28_23010 IPR025713 Motility protein B, N-terminal domain LIT28_23010 IPR006665 OmpA-like domain LIT28_23015 IPR002898 MotA/TolQ/ExbB proton channel LIT28_23015 IPR000540 Flagellar motor protein MotA, conserved site LIT28_23020 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LIT28_23020 IPR003709 Peptidase M15B LIT28_23025 IPR029069 HotDog domain superfamily LIT28_23025 IPR006683 Thioesterase domain LIT28_23030 IPR009051 Alpha-helical ferredoxin LIT28_23030 IPR012675 Beta-grasp domain superfamily LIT28_23030 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIT28_23030 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein LIT28_23030 IPR036010 2Fe-2S ferredoxin-like superfamily LIT28_23030 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal LIT28_23030 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIT28_23035 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LIT28_23035 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_23035 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site LIT28_23035 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LIT28_23035 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LIT28_23035 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria LIT28_23035 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LIT28_23040 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LIT28_23040 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute LIT28_23040 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit LIT28_23040 IPR011138 Succinate dehydrogenase cytochrome b558 subunit LIT28_23045 IPR019642 Protein of unknown function DUF2507 LIT28_23045 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily LIT28_23050 IPR000305 GIY-YIG endonuclease LIT28_23050 IPR035901 GIY-YIG endonuclease superfamily LIT28_23050 IPR036876 UVR domain superfamily LIT28_23050 IPR004791 UvrABC system, subunit C LIT28_23050 IPR010994 RuvA domain 2-like LIT28_23050 IPR038476 UvrC homology region 2 superfamily LIT28_23050 IPR001943 UVR domain LIT28_23050 IPR001162 UvrC family homology region LIT28_23055 IPR005746 Thioredoxin LIT28_23055 IPR036249 Thioredoxin-like superfamily LIT28_23055 IPR017937 Thioredoxin, conserved site LIT28_23055 IPR013766 Thioredoxin domain LIT28_23060 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site LIT28_23060 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal LIT28_23060 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal LIT28_23060 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal LIT28_23060 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIT28_23060 IPR001308 Electron transfer flavoprotein alpha subunit/FixB LIT28_23060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_23065 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site LIT28_23065 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal LIT28_23065 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal LIT28_23065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_23065 IPR012255 Electron transfer flavoprotein, beta subunit LIT28_23070 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LIT28_23070 IPR001753 Enoyl-CoA hydratase/isomerase LIT28_23070 IPR029045 ClpP/crotonase-like domain superfamily LIT28_23075 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_23075 IPR013570 Transcription regulator YsiA, C-terminal LIT28_23075 IPR001647 DNA-binding HTH domain, TetR-type LIT28_23075 IPR009057 Homeobox-like domain superfamily LIT28_23080 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_23080 IPR020845 AMP-binding, conserved site LIT28_23080 IPR042099 AMP-dependent synthetase-like superfamily LIT28_23080 IPR000873 AMP-dependent synthetase/ligase LIT28_23090 IPR002491 ABC transporter periplasmic binding domain LIT28_23095 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_23095 IPR037294 ABC transporter, BtuC-like LIT28_23100 IPR034660 DinB/YfiT-like putative metalloenzymes LIT28_23100 IPR007837 DNA damage-inducible protein DinB LIT28_23130 IPR003593 AAA+ ATPase domain LIT28_23130 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_23130 IPR017871 ABC transporter, conserved site LIT28_23130 IPR003439 ABC transporter-like LIT28_23135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_23135 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_23135 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_23135 IPR005467 Histidine kinase domain LIT28_23135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_23135 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_23140 IPR039420 Transcriptional regulatory protein WalR-like LIT28_23140 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_23140 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_23140 IPR011006 CheY-like superfamily LIT28_23140 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_23140 IPR001789 Signal transduction response regulator, receiver domain LIT28_23150 IPR019240 Protein of unknown function DUF2196 LIT28_23155 IPR002478 PUA domain LIT28_23155 IPR015947 PUA-like superfamily LIT28_23155 IPR036974 PUA domain superfamily LIT28_23155 IPR041532 RlmI, PUA-like domain LIT28_23155 IPR019614 S-adenosylmethionine-dependent methyltransferase LIT28_23155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_23160 IPR007138 Antibiotic biosynthesis monooxygenase domain LIT28_23160 IPR011008 Dimeric alpha-beta barrel LIT28_23160 IPR023953 Heme oxygenase IsdG LIT28_23165 IPR005754 Sortase family LIT28_23165 IPR023365 Sortase domain superfamily LIT28_23165 IPR009835 Sortase B family LIT28_23165 IPR015986 Sortase B, Firmicutes LIT28_23170 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_23170 IPR017871 ABC transporter, conserved site LIT28_23170 IPR003439 ABC transporter-like LIT28_23170 IPR003593 AAA+ ATPase domain LIT28_23175 IPR037294 ABC transporter, BtuC-like LIT28_23175 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_23180 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE LIT28_23180 IPR002491 ABC transporter periplasmic binding domain LIT28_23185 IPR006635 NEAT domain LIT28_23185 IPR037250 NEAT domain superfamily LIT28_23185 IPR017502 Sortase B cell surface sorting signal LIT28_23195 IPR019909 Haem uptake protein IsdC LIT28_23195 IPR006635 NEAT domain LIT28_23195 IPR037250 NEAT domain superfamily LIT28_23195 IPR017502 Sortase B cell surface sorting signal LIT28_23200 IPR004685 Branched-chain amino acid transport system II carrier protein LIT28_23205 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LIT28_23205 IPR006145 Pseudouridine synthase, RsuA/RluA LIT28_23205 IPR002942 RNA-binding S4 domain LIT28_23205 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LIT28_23205 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_23205 IPR036986 RNA-binding S4 domain superfamily LIT28_23205 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LIT28_23210 IPR007696 DNA mismatch repair protein MutS, core LIT28_23210 IPR000432 DNA mismatch repair protein MutS, C-terminal LIT28_23210 IPR036187 DNA mismatch repair protein MutS, core domain superfamily LIT28_23210 IPR005747 Endonuclease MutS2 LIT28_23210 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_23210 IPR002625 Smr domain LIT28_23210 IPR036063 Smr domain superfamily LIT28_23215 IPR022311 Uncharacterised conserved protein UCP005047, YshC LIT28_23215 IPR016195 Polymerase/histidinol phosphatase-like LIT28_23215 IPR003141 Polymerase/histidinol phosphatase, N-terminal LIT28_23215 IPR004013 PHP domain LIT28_23215 IPR029398 DNA polymerase beta, thumb domain LIT28_23215 IPR037160 DNA polymerase, thumb domain superfamily LIT28_23215 IPR027421 DNA polymerase lambda lyase domain superfamily LIT28_23215 IPR010996 DNA polymerase beta-like, N-terminal domain LIT28_23215 IPR002054 DNA-directed DNA polymerase X LIT28_23215 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LIT28_23220 IPR003825 Colicin V production, CvpA LIT28_23225 IPR007838 Cell division protein ZapA-like LIT28_23225 IPR036192 Cell division protein ZapA-like superfamily LIT28_23225 IPR023688 Cell division protein ZapA, firmicutes LIT28_23230 IPR012295 TBP domain superfamily LIT28_23230 IPR036397 Ribonuclease H superfamily LIT28_23230 IPR012337 Ribonuclease H-like superfamily LIT28_23230 IPR001352 Ribonuclease HII/HIII LIT28_23230 IPR004641 Ribonuclease HIII LIT28_23230 IPR024567 Ribonuclease HII/HIII domain LIT28_23230 IPR024568 Ribonuclease HIII, N-terminal LIT28_23250 IPR012340 Nucleic acid-binding, OB-fold LIT28_23250 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LIT28_23250 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb LIT28_23250 IPR004522 Asparagine-tRNA ligase LIT28_23250 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_23250 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LIT28_23255 IPR005147 tRNA synthetase, B5-domain LIT28_23255 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain LIT28_23255 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain LIT28_23255 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LIT28_23255 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit LIT28_23255 IPR012340 Nucleic acid-binding, OB-fold LIT28_23255 IPR002547 tRNA-binding domain LIT28_23255 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily LIT28_23255 IPR005121 Ferrodoxin-fold anticodon-binding domain LIT28_23255 IPR009061 Putative DNA-binding domain superfamily LIT28_23255 IPR005146 B3/B4 tRNA-binding domain LIT28_23260 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_23260 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit LIT28_23260 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal LIT28_23260 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial LIT28_23260 IPR002319 Phenylalanyl-tRNA synthetase LIT28_23260 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LIT28_23265 IPR013123 RNA 2-O ribose methyltransferase, substrate binding LIT28_23265 IPR001537 tRNA/rRNA methyltransferase, SpoU type LIT28_23265 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIT28_23265 IPR029064 50S ribosomal protein L30e-like LIT28_23265 IPR029028 Alpha/beta knot methyltransferases LIT28_23270 IPR017525 Small, acid-soluble spore protein I LIT28_23275 IPR006674 HD domain LIT28_23275 IPR006675 HDIG domain LIT28_23275 IPR003607 HD/PDEase domain LIT28_23305 IPR004638 Drug resistance transporter EmrB-like LIT28_23305 IPR011701 Major facilitator superfamily LIT28_23305 IPR036259 MFS transporter superfamily LIT28_23305 IPR020846 Major facilitator superfamily domain LIT28_23310 IPR011053 Single hybrid motif LIT28_23315 IPR009057 Homeobox-like domain superfamily LIT28_23315 IPR001647 DNA-binding HTH domain, TetR-type LIT28_23315 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_23315 IPR011075 Tetracyclin repressor-like, C-terminal domain LIT28_23320 IPR008007 Peptidase M42 LIT28_23320 IPR023367 Peptidase M42, domain 2 LIT28_23330 IPR005813 Ribosomal protein L20 LIT28_23330 IPR035566 Ribosomal protein L20, C-terminal LIT28_23335 IPR001706 Ribosomal protein L35, non-mitochondrial LIT28_23335 IPR037229 Ribosomal protein L35 superfamily LIT28_23335 IPR018265 Ribosomal protein L35, conserved site LIT28_23335 IPR021137 Ribosomal protein L35 LIT28_23340 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily LIT28_23340 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily LIT28_23340 IPR019813 Translation initiation factor 3, conserved site LIT28_23340 IPR001288 Translation initiation factor 3 LIT28_23340 IPR019815 Translation initiation factor 3, C-terminal LIT28_23340 IPR019814 Translation initiation factor 3, N-terminal LIT28_23345 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LIT28_23345 IPR033728 Threonine-tRNA ligase catalytic core domain LIT28_23345 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LIT28_23345 IPR002320 Threonine-tRNA ligase, class IIa LIT28_23345 IPR012675 Beta-grasp domain superfamily LIT28_23345 IPR004095 TGS LIT28_23345 IPR036621 Anticodon-binding domain superfamily LIT28_23345 IPR004154 Anticodon-binding LIT28_23345 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_23345 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIT28_23345 IPR012676 TGS-like LIT28_23350 IPR014199 Sporulation protein YtxC LIT28_23355 IPR003593 AAA+ ATPase domain LIT28_23355 IPR002611 IstB-like ATP-binding protein LIT28_23355 IPR009928 Primosomal DnaI, N-terminal LIT28_23355 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_23360 IPR006343 DnaD domain LIT28_23365 IPR005144 ATP-cone domain LIT28_23365 IPR003796 Ribonucleotide reductase regulator NrdR-like LIT28_23370 IPR016067 S-adenosylmethionine decarboxylase, core LIT28_23370 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic LIT28_23370 IPR017716 S-adenosylmethionine decarboxylase proenzyme LIT28_23375 IPR036291 NAD(P)-binding domain superfamily LIT28_23375 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LIT28_23375 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LIT28_23375 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LIT28_23375 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I LIT28_23375 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site LIT28_23380 IPR001977 Dephospho-CoA kinase LIT28_23380 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_23385 IPR003810 Putative manganese efflux pump LIT28_23385 IPR014205 Sporulation protein YtaF LIT28_23390 IPR010663 Zinc finger, FPG/IleRS-type LIT28_23390 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type LIT28_23390 IPR010979 Ribosomal protein S13-like, H2TH LIT28_23390 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain LIT28_23390 IPR020629 Formamidopyrimidine-DNA glycosylase LIT28_23390 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding LIT28_23390 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site LIT28_23390 IPR035937 MutM-like, N-terminal LIT28_23395 IPR036397 Ribonuclease H superfamily LIT28_23395 IPR012337 Ribonuclease H-like superfamily LIT28_23395 IPR029060 PIN-like domain superfamily LIT28_23395 IPR008918 Helix-hairpin-helix motif, class 2 LIT28_23395 IPR002298 DNA polymerase A LIT28_23395 IPR018320 DNA polymerase 1 LIT28_23395 IPR001098 DNA-directed DNA polymerase, family A, palm domain LIT28_23395 IPR019760 DNA-directed DNA polymerase, family A, conserved site LIT28_23395 IPR036279 5'-3' exonuclease, C-terminal domain superfamily LIT28_23395 IPR002421 5'-3' exonuclease, N-terminal LIT28_23395 IPR002562 3'-5' exonuclease domain LIT28_23395 IPR020045 DNA polymerase I-like, H3TH domain LIT28_23395 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal LIT28_23400 IPR035965 PAS domain superfamily LIT28_23400 IPR000014 PAS domain LIT28_23400 IPR005467 Histidine kinase domain LIT28_23400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_23400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_23400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_23400 IPR013767 PAS fold LIT28_23400 IPR031967 PhoR, single Cache-like domain LIT28_23400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_23400 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_23405 IPR039420 Transcriptional regulatory protein WalR-like LIT28_23405 IPR001789 Signal transduction response regulator, receiver domain LIT28_23405 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_23405 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_23405 IPR011006 CheY-like superfamily LIT28_23405 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_23420 IPR036291 NAD(P)-binding domain superfamily LIT28_23420 IPR001557 L-lactate/malate dehydrogenase LIT28_23420 IPR022383 Lactate/malate dehydrogenase, C-terminal LIT28_23420 IPR001236 Lactate/malate dehydrogenase, N-terminal LIT28_23420 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LIT28_23420 IPR011275 Malate dehydrogenase, type 3 LIT28_23425 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic LIT28_23425 IPR024084 Isopropylmalate dehydrogenase-like domain LIT28_23425 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LIT28_23430 IPR019810 Citrate synthase active site LIT28_23430 IPR036969 Citrate synthase superfamily LIT28_23430 IPR002020 Citrate synthase LIT28_23430 IPR016143 Citrate synthase-like, small alpha subdomain LIT28_23430 IPR024176 Citrate synthase, bacterial-type LIT28_23430 IPR011278 2-methylcitrate synthase/citrate synthase type I LIT28_23430 IPR016142 Citrate synthase-like, large alpha subdomain LIT28_23435 IPR007382 Uncharacterised protein family UPF0756, transmembrame LIT28_23440 IPR002549 Transmembrane protein TqsA-like LIT28_23440 IPR014227 Putative transport protein YtvI-like LIT28_23445 IPR007313 FxsA cytoplasmic membrane protein LIT28_23450 IPR015806 Pyruvate kinase, insert domain superfamily LIT28_23450 IPR036918 Pyruvate kinase, C-terminal domain superfamily LIT28_23450 IPR015793 Pyruvate kinase, barrel LIT28_23450 IPR018209 Pyruvate kinase, active site LIT28_23450 IPR011037 Pyruvate kinase-like, insert domain superfamily LIT28_23450 IPR040442 Pyruvate kinase-like domain superfamily LIT28_23450 IPR015795 Pyruvate kinase, C-terminal LIT28_23450 IPR001697 Pyruvate kinase LIT28_23450 IPR036637 Phosphohistidine domain superfamily LIT28_23450 IPR008279 PEP-utilising enzyme, mobile domain LIT28_23450 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIT28_23455 IPR035966 Phosphofructokinase superfamily LIT28_23455 IPR000023 Phosphofructokinase domain LIT28_23455 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic LIT28_23455 IPR015912 Phosphofructokinase, conserved site LIT28_23455 IPR022953 ATP-dependent 6-phosphofructokinase LIT28_23455 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type LIT28_23460 IPR001095 Acetyl-CoA carboxylase, alpha subunit LIT28_23460 IPR029045 ClpP/crotonase-like domain superfamily LIT28_23460 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal LIT28_23465 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal LIT28_23465 IPR034733 Acetyl-CoA carboxylase LIT28_23465 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit LIT28_23465 IPR029045 ClpP/crotonase-like domain superfamily LIT28_23465 IPR041010 Acetyl-coA carboxylase zinc finger domain LIT28_23470 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_23470 IPR036390 Winged helix DNA-binding domain superfamily LIT28_23470 IPR000524 Transcription regulator HTH, GntR LIT28_23475 IPR036291 NAD(P)-binding domain superfamily LIT28_23475 IPR015884 Malic enzyme, conserved site LIT28_23475 IPR012301 Malic enzyme, N-terminal domain LIT28_23475 IPR037062 Malic enzyme, N-terminal domain superfamily LIT28_23475 IPR012302 Malic enzyme, NAD-binding LIT28_23475 IPR001891 Malic oxidoreductase LIT28_23480 IPR004805 DNA polymerase III, alpha subunit LIT28_23480 IPR016195 Polymerase/histidinol phosphatase-like LIT28_23480 IPR003141 Polymerase/histidinol phosphatase, N-terminal LIT28_23480 IPR004013 PHP domain LIT28_23480 IPR029460 DNA polymerase, helix-hairpin-helix motif LIT28_23480 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain LIT28_23480 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain LIT28_23480 IPR040982 DNA polymerase III alpha subunit finger domain LIT28_23480 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LIT28_23485 IPR025689 Sporulation protein YtrH LIT28_23495 IPR003156 DHHA1 domain LIT28_23495 IPR001667 DDH domain LIT28_23495 IPR038763 DHH phosphoesterase superfamily LIT28_23500 IPR025618 YtpI-like protein LIT28_23510 IPR002575 Aminoglycoside phosphotransferase LIT28_23510 IPR011009 Protein kinase-like domain superfamily LIT28_23520 IPR000644 CBS domain LIT28_23520 IPR000524 Transcription regulator HTH, GntR LIT28_23520 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily LIT28_23520 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_23520 IPR036390 Winged helix DNA-binding domain superfamily LIT28_23520 IPR010766 DRTGG LIT28_23520 IPR029069 HotDog domain superfamily LIT28_23520 IPR006683 Thioesterase domain LIT28_23530 IPR001279 Metallo-beta-lactamase LIT28_23530 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_23530 IPR022877 Protein of unknown funcion UPF0173 LIT28_23535 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LIT28_23535 IPR036005 Creatinase/aminopeptidase-like LIT28_23535 IPR000587 Creatinase, N-terminal LIT28_23535 IPR000994 Peptidase M24 LIT28_23535 IPR001714 Peptidase M24, methionine aminopeptidase LIT28_23535 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LIT28_23575 IPR011051 RmlC-like cupin domain superfamily LIT28_23575 IPR014710 RmlC-like jelly roll fold LIT28_23575 IPR019780 Germin, manganese binding site LIT28_23575 IPR013096 Cupin 2, conserved barrel LIT28_23585 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_23585 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_23595 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 LIT28_23595 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 LIT28_23595 IPR036291 NAD(P)-binding domain superfamily LIT28_23595 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LIT28_23595 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LIT28_23595 IPR008141 Alanine dehydrogenase LIT28_23600 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_23600 IPR036291 NAD(P)-binding domain superfamily LIT28_23605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_23605 IPR006015 Universal stress protein A family LIT28_23605 IPR006016 UspA LIT28_23625 IPR008948 L-Aspartase-like LIT28_23625 IPR000362 Fumarate lyase family LIT28_23625 IPR020557 Fumarate lyase, conserved site LIT28_23625 IPR024083 Fumarase/histidase, N-terminal LIT28_23625 IPR009049 Argininosuccinate lyase LIT28_23625 IPR029419 Argininosuccinate lyase, C-terminal LIT28_23625 IPR022761 Fumarate lyase, N-terminal LIT28_23630 IPR001518 Argininosuccinate synthase LIT28_23630 IPR018223 Argininosuccinate synthase, conserved site LIT28_23630 IPR023434 Argininosuccinate synthase, type 1 subfamily LIT28_23630 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body LIT28_23630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_23645 IPR019264 Domain of unknown function DUF2179 LIT28_23645 IPR003740 Uncharacterised membrane protein YitT LIT28_23645 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_23650 IPR024787 EcsC protein LIT28_23665 IPR004372 Acetate/propionate kinase LIT28_23665 IPR023865 Aliphatic acid kinase, short-chain, conserved site LIT28_23665 IPR000890 Aliphatic acid kinase, short-chain LIT28_23670 IPR003356 DNA methylase, adenine-specific LIT28_23670 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted LIT28_23670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_23675 IPR013740 Redoxin LIT28_23675 IPR036249 Thioredoxin-like superfamily LIT28_23675 IPR018219 Thiol peroxidase conserved site LIT28_23675 IPR002065 Thiol peroxidase Tpx LIT28_23675 IPR013766 Thioredoxin domain LIT28_23680 IPR014229 Sporulation protein YtfJ LIT28_23690 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal LIT28_23690 IPR002504 NAD kinase LIT28_23690 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily LIT28_23690 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal LIT28_23695 IPR032466 Metal-dependent hydrolase LIT28_23695 IPR033932 YtcJ like LIT28_23695 IPR013108 Amidohydrolase 3 LIT28_23695 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_23705 IPR020845 AMP-binding, conserved site LIT28_23705 IPR042099 AMP-dependent synthetase-like superfamily LIT28_23705 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_23705 IPR000873 AMP-dependent synthetase/ligase LIT28_23710 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_23710 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_23710 IPR038300 SASP, alpha/beta-type superfamily LIT28_23715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_23715 IPR020536 Thil, AANH domain LIT28_23715 IPR003720 tRNA sulfurtransferase ThiI LIT28_23715 IPR004114 THUMP domain LIT28_23720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_23720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_23720 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_23720 IPR016454 Cysteine desulfurase LIT28_23720 IPR000192 Aminotransferase class V domain LIT28_23725 IPR010379 Septation ring formation regulator EzrA LIT28_23735 IPR000620 EamA domain LIT28_23740 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_23740 IPR009057 Homeobox-like domain superfamily LIT28_23740 IPR001647 DNA-binding HTH domain, TetR-type LIT28_23745 IPR000614 Free Met sulfoxide reductase conserved site LIT28_23745 IPR003018 GAF domain LIT28_23745 IPR029016 GAF-like domain superfamily LIT28_23750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_23750 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_23750 IPR006237 L-methionine gamma-lyase LIT28_23750 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_23750 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LIT28_23755 IPR022801 Ribosomal protein S4/S9 LIT28_23755 IPR005709 Ribosomal protein S4, bacterial-type LIT28_23755 IPR018079 Ribosomal protein S4, conserved site LIT28_23755 IPR002942 RNA-binding S4 domain LIT28_23755 IPR036986 RNA-binding S4 domain superfamily LIT28_23755 IPR001912 Ribosomal protein S4/S9, N-terminal LIT28_23770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_23770 IPR002942 RNA-binding S4 domain LIT28_23770 IPR002305 Aminoacyl-tRNA synthetase, class Ic LIT28_23770 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 LIT28_23770 IPR024088 Tyrosine-tRNA ligase, bacterial-type LIT28_23770 IPR002307 Tyrosine-tRNA ligase LIT28_23770 IPR036986 RNA-binding S4 domain superfamily LIT28_23770 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_23780 IPR039425 RNA polymerase sigma-70 like LIT28_23780 IPR014294 RNA polymerase sigma-W, bacillaceae LIT28_23780 IPR007627 RNA polymerase sigma-70 region 2 LIT28_23780 IPR013325 RNA polymerase sigma factor, region 2 LIT28_23780 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_23780 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_23780 IPR014284 RNA polymerase sigma-70 like domain LIT28_23780 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LIT28_23780 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_23795 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_23795 IPR020845 AMP-binding, conserved site LIT28_23795 IPR042099 AMP-dependent synthetase-like superfamily LIT28_23795 IPR000873 AMP-dependent synthetase/ligase LIT28_23800 IPR016181 Acyl-CoA N-acyltransferase LIT28_23800 IPR024699 Acetoin utilization protein AcuA LIT28_23800 IPR000182 GNAT domain LIT28_23805 IPR000644 CBS domain LIT28_23810 IPR003085 Acetoin utilization protein AcuC LIT28_23810 IPR000286 Histone deacetylase family LIT28_23810 IPR023801 Histone deacetylase domain LIT28_23810 IPR037138 Histone deacetylase domain superfamily LIT28_23810 IPR023696 Ureohydrolase domain superfamily LIT28_23825 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_23825 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_23825 IPR001789 Signal transduction response regulator, receiver domain LIT28_23825 IPR039420 Transcriptional regulatory protein WalR-like LIT28_23825 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_23825 IPR011006 CheY-like superfamily LIT28_23830 IPR005467 Histidine kinase domain LIT28_23830 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_23830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_23830 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_23830 IPR003660 HAMP domain LIT28_23830 IPR000014 PAS domain LIT28_23830 IPR035965 PAS domain superfamily LIT28_23830 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_23830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_23835 IPR002110 Ankyrin repeat LIT28_23835 IPR020683 Ankyrin repeat-containing domain LIT28_23835 IPR036770 Ankyrin repeat-containing domain superfamily LIT28_23840 IPR036291 NAD(P)-binding domain superfamily LIT28_23840 IPR000683 Oxidoreductase, N-terminal LIT28_23845 IPR036019 Gated mechanosensitive channel LIT28_23845 IPR019823 Large-conductance mechanosensitive channel, conserved site LIT28_23845 IPR001185 Large-conductance mechanosensitive channel LIT28_23845 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L LIT28_23870 IPR006377 Catabolite control protein A LIT28_23870 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_23870 IPR028082 Periplasmic binding protein-like I LIT28_23870 IPR000843 LacI-type HTH domain LIT28_23875 IPR011426 CamS sex pheromone cAM373 LIT28_23880 IPR022551 Protein of unknown function DUF2847 LIT28_23880 IPR036249 Thioredoxin-like superfamily LIT28_23890 IPR035097 Peptidase M29, N-terminal LIT28_23890 IPR000787 Peptidase M29 LIT28_23910 IPR016181 Acyl-CoA N-acyltransferase LIT28_23910 IPR000182 GNAT domain LIT28_23915 IPR036565 Mur-like, catalytic domain superfamily LIT28_23915 IPR004101 Mur ligase, C-terminal LIT28_23915 IPR036615 Mur ligase, C-terminal domain superfamily LIT28_23915 IPR013221 Mur ligase, central LIT28_23915 IPR000713 Mur ligase, N-terminal catalytic domain LIT28_23915 IPR005758 UDP-N-acetylmuramate--L-alanine ligase LIT28_23925 IPR041027 FtsK alpha domain LIT28_23925 IPR002543 FtsK domain LIT28_23925 IPR018541 FtsK gamma domain LIT28_23925 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_23925 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_23925 IPR036390 Winged helix DNA-binding domain superfamily LIT28_23925 IPR003593 AAA+ ATPase domain LIT28_23930 IPR017273 Probable cell wall amidase LytH LIT28_23930 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LIT28_23930 IPR003646 SH3-like domain, bacterial-type LIT28_23940 IPR002547 tRNA-binding domain LIT28_23940 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain LIT28_23940 IPR037154 YtpR-like superfamily LIT28_23940 IPR012340 Nucleic acid-binding, OB-fold LIT28_23940 IPR027855 Domain of unknown function DUF4479 LIT28_23945 IPR010838 Protein of unknown unction DUF1444 LIT28_23950 IPR036249 Thioredoxin-like superfamily LIT28_23950 IPR013766 Thioredoxin domain LIT28_23955 IPR029001 Inosine triphosphate pyrophosphatase-like LIT28_23955 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 LIT28_23955 IPR002786 Inosine/xanthosine triphosphatase LIT28_23960 IPR023367 Peptidase M42, domain 2 LIT28_23960 IPR008007 Peptidase M42 LIT28_23970 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_23970 IPR001279 Metallo-beta-lactamase LIT28_23975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_23975 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type LIT28_23980 IPR025547 YtzH-like protein LIT28_23985 IPR002575 Aminoglycoside phosphotransferase LIT28_23985 IPR011009 Protein kinase-like domain superfamily LIT28_23990 IPR040697 Pullulanase, N1 domain LIT28_23990 IPR011840 Pullulanase, type I LIT28_23990 IPR013783 Immunoglobulin-like fold LIT28_23990 IPR017853 Glycoside hydrolase superfamily LIT28_23990 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LIT28_23990 IPR013780 Glycosyl hydrolase, all-beta LIT28_23990 IPR004193 Glycoside hydrolase, family 13, N-terminal LIT28_23990 IPR014756 Immunoglobulin E-set LIT28_23995 IPR004175 RNA 2',3'-cyclic phosphodiesterase LIT28_23995 IPR009097 Cyclic phosphodiesterase LIT28_23995 IPR014051 Phosphoesterase, HXTX LIT28_24000 IPR010964 Peptidase M20A, peptidase V-related LIT28_24000 IPR002933 Peptidase M20 LIT28_24000 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site LIT28_24000 IPR036264 Bacterial exopeptidase dimerisation domain LIT28_24005 IPR001034 DeoR-type HTH domain LIT28_24005 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_24005 IPR036390 Winged helix DNA-binding domain superfamily LIT28_24010 IPR036986 RNA-binding S4 domain superfamily LIT28_24010 IPR002942 RNA-binding S4 domain LIT28_24010 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LIT28_24010 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LIT28_24010 IPR006145 Pseudouridine synthase, RsuA/RluA LIT28_24010 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIT28_24010 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LIT28_24015 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type LIT28_24015 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LIT28_24015 IPR002797 Polysaccharide biosynthesis protein LIT28_24020 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like LIT28_24020 IPR023166 HI0933-like insert domain superfamily LIT28_24020 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_24025 IPR004638 Drug resistance transporter EmrB-like LIT28_24025 IPR011701 Major facilitator superfamily LIT28_24025 IPR020846 Major facilitator superfamily domain LIT28_24025 IPR036259 MFS transporter superfamily LIT28_24030 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_24030 IPR001845 HTH ArsR-type DNA-binding domain LIT28_24030 IPR018334 ArsR-type transcription regulator, HTH motif LIT28_24030 IPR036390 Winged helix DNA-binding domain superfamily LIT28_24030 IPR011991 ArsR-like helix-turn-helix domain LIT28_24035 IPR013538 Activator of Hsp90 ATPase homologue 1-like LIT28_24035 IPR023393 START-like domain superfamily LIT28_24045 IPR020296 Sporulation protein Cse60 LIT28_24055 IPR036101 CarD-like/TRCF domain superfamily LIT28_24055 IPR003711 CarD-like/TRCF domain LIT28_24055 IPR042215 CarD-like, C-terminal domain LIT28_24060 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_24060 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_24060 IPR036291 NAD(P)-binding domain superfamily LIT28_24065 IPR010651 Sugar transport protein LIT28_24080 IPR003448 Molybdopterin biosynthesis MoaE LIT28_24080 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily LIT28_24085 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_24085 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain LIT28_24090 IPR005111 MoeA, C-terminal, domain IV LIT28_24090 IPR036135 MoeA, N-terminal and linker domain superfamily LIT28_24090 IPR038987 Molybdopterin biosynthesis protein MoeA-like LIT28_24090 IPR036688 MoeA, C-terminal, domain IV superfamily LIT28_24090 IPR001453 MoaB/Mog domain LIT28_24090 IPR005110 MoeA, N-terminal and linker domain LIT28_24090 IPR036425 MoaB/Mog-like domain superfamily LIT28_24095 IPR023045 Molybdenum cofactor biosynthesis C LIT28_24095 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily LIT28_24095 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain LIT28_24100 IPR035985 Ubiquitin-activating enzyme LIT28_24100 IPR000594 THIF-type NAD/FAD binding fold LIT28_24105 IPR007197 Radical SAM LIT28_24105 IPR013483 Molybdenum cofactor biosynthesis protein A LIT28_24105 IPR010505 Molybdenum cofactor synthesis C-terminal LIT28_24105 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site LIT28_24105 IPR013785 Aldolase-type TIM barrel LIT28_24105 IPR006638 Elp3/MiaB/NifB LIT28_24125 IPR001763 Rhodanese-like domain LIT28_24125 IPR036873 Rhodanese-like domain superfamily LIT28_24135 IPR000073 Alpha/beta hydrolase fold-1 LIT28_24135 IPR008220 Homoserine/serine acetyltransferase MetX-like LIT28_24135 IPR029058 Alpha/Beta hydrolase fold LIT28_24140 IPR004995 Bacillus/Clostridium Ger spore germination protein LIT28_24145 IPR004761 Spore germination GerAB LIT28_24175 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_24175 IPR002300 Aminoacyl-tRNA synthetase, class Ia LIT28_24175 IPR002302 Leucine-tRNA ligase LIT28_24175 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LIT28_24175 IPR015413 Methionyl/Leucyl tRNA synthetase LIT28_24175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_24175 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIT28_24175 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LIT28_24175 IPR025709 Leucyl-tRNA synthetase, editing domain LIT28_24180 IPR036259 MFS transporter superfamily LIT28_24180 IPR020846 Major facilitator superfamily domain LIT28_24180 IPR011701 Major facilitator superfamily LIT28_24185 IPR038770 Sodium/solute symporter superfamily LIT28_24185 IPR006153 Cation/H+ exchanger LIT28_24190 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LIT28_24190 IPR006037 Regulator of K+ conductance, C-terminal LIT28_24190 IPR026278 Potassium/proton antiporter subunit KhtT LIT28_24195 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_24195 IPR002104 Integrase, catalytic domain LIT28_24195 IPR013762 Integrase-like, catalytic domain superfamily LIT28_24205 IPR003439 ABC transporter-like LIT28_24205 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_24205 IPR003593 AAA+ ATPase domain LIT28_24210 IPR007349 Domain of unknown function DUF418 LIT28_24210 IPR012429 Domain of unknown function DUF1624 LIT28_24220 IPR019668 Uncharacterised protein family YtzC LIT28_24225 IPR032432 Radical SAM, C-terminal extension LIT28_24225 IPR006638 Elp3/MiaB/NifB LIT28_24225 IPR039661 ELP3/YhcC LIT28_24225 IPR007197 Radical SAM LIT28_24225 IPR023404 Radical SAM, alpha/beta horseshoe LIT28_24225 IPR005911 Protein YhcC-like LIT28_24230 IPR010719 Putative rRNA methylase LIT28_24230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_24235 IPR003439 ABC transporter-like LIT28_24235 IPR017871 ABC transporter, conserved site LIT28_24235 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_24235 IPR003593 AAA+ ATPase domain LIT28_24245 IPR001920 Asp/Glu racemase LIT28_24245 IPR004380 Aspartate racemase LIT28_24245 IPR015942 Asp/Glu/hydantoin racemase LIT28_24245 IPR033134 Asp/Glu racemase, active site 2 LIT28_24245 IPR018187 Asp/Glu racemase, active site 1 LIT28_24260 IPR019712 Tetraprenyl-beta-curcumene synthase YtpB-like LIT28_24265 IPR029058 Alpha/Beta hydrolase fold LIT28_24265 IPR000073 Alpha/beta hydrolase fold-1 LIT28_24265 IPR022742 Serine aminopeptidase, S33 LIT28_24270 IPR001451 Hexapeptide repeat LIT28_24270 IPR011004 Trimeric LpxA-like superfamily LIT28_24275 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LIT28_24275 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LIT28_24280 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LIT28_24280 IPR001296 Glycosyl transferase, family 1 LIT28_24285 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_24285 IPR025877 MobA-like NTP transferase LIT28_24285 IPR013482 Molybdenum cofactor guanylyltransferase LIT28_24290 IPR012245 Molybdenum cofactor biosynthesis protein MoaB LIT28_24290 IPR036425 MoaB/Mog-like domain superfamily LIT28_24290 IPR001453 MoaB/Mog domain LIT28_24290 IPR008284 Molybdenum cofactor biosynthesis, conserved site LIT28_24305 IPR022629 S-adenosylmethionine synthetase, central domain LIT28_24305 IPR022636 S-adenosylmethionine synthetase superfamily LIT28_24305 IPR002133 S-adenosylmethionine synthetase LIT28_24305 IPR022630 S-adenosylmethionine synthetase, C-terminal LIT28_24305 IPR022631 S-adenosylmethionine synthetase, conserved site LIT28_24305 IPR022628 S-adenosylmethionine synthetase, N-terminal LIT28_24310 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal LIT28_24310 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal LIT28_24310 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site LIT28_24310 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising LIT28_24340 IPR013767 PAS fold LIT28_24340 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_24340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_24340 IPR005467 Histidine kinase domain LIT28_24340 IPR035965 PAS domain superfamily LIT28_24340 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_24340 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_24340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_24340 IPR000014 PAS domain LIT28_24345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_24345 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_24345 IPR013655 PAS fold-3 LIT28_24345 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_24345 IPR035965 PAS domain superfamily LIT28_24345 IPR001610 PAC motif LIT28_24345 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_24345 IPR005467 Histidine kinase domain LIT28_24345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_24345 IPR013767 PAS fold LIT28_24345 IPR000014 PAS domain LIT28_24355 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIT28_24355 IPR000917 Sulfatase, N-terminal LIT28_24375 IPR003439 ABC transporter-like LIT28_24375 IPR017871 ABC transporter, conserved site LIT28_24375 IPR003593 AAA+ ATPase domain LIT28_24375 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_24380 IPR035906 MetI-like superfamily LIT28_24380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_24400 IPR000086 NUDIX hydrolase domain LIT28_24400 IPR020084 NUDIX hydrolase, conserved site LIT28_24400 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_24400 IPR014078 Nucleoside triphosphatase YtkD LIT28_24400 IPR020476 NUDIX hydrolase LIT28_24430 IPR003815 S-ribosylhomocysteinase (LuxS) LIT28_24430 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily LIT28_24430 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LIT28_24435 IPR002696 Putative membrane protein insertion efficiency factor LIT28_24440 IPR001765 Carbonic anhydrase LIT28_24440 IPR036874 Carbonic anhydrase superfamily LIT28_24445 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LIT28_24450 IPR003317 Cytochrome ubiquinol oxidase subunit 2 LIT28_24455 IPR019618 Spore germination protein GerPA/GerPF LIT28_24480 IPR019264 Domain of unknown function DUF2179 LIT28_24480 IPR003740 Uncharacterised membrane protein YitT LIT28_24480 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_24505 IPR007157 PspA/IM30 LIT28_24520 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_24520 IPR011640 Ferrous iron transport protein B, C-terminal LIT28_24520 IPR041069 FeoB, cytosolic helical domain LIT28_24520 IPR030389 FeoB-type guanine nucleotide-binding (G) domain LIT28_24520 IPR003373 Ferrous iron transport protein B LIT28_24520 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain LIT28_24530 IPR012651 Thiamine transporter ThiT LIT28_24535 IPR003660 HAMP domain LIT28_24535 IPR013767 PAS fold LIT28_24535 IPR035965 PAS domain superfamily LIT28_24535 IPR000014 PAS domain LIT28_24535 IPR041328 ResE, histidine kinase sensor domain LIT28_24535 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_24535 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_24535 IPR005467 Histidine kinase domain LIT28_24535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_24535 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_24535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_24540 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_24540 IPR039420 Transcriptional regulatory protein WalR-like LIT28_24540 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_24540 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_24540 IPR001789 Signal transduction response regulator, receiver domain LIT28_24540 IPR011006 CheY-like superfamily LIT28_24565 IPR029057 Phosphoribosyltransferase-like LIT28_24565 IPR000836 Phosphoribosyltransferase domain LIT28_24565 IPR005904 Hypoxanthine phosphoribosyl transferase LIT28_24570 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily LIT28_24570 IPR001206 Diacylglycerol kinase, catalytic domain LIT28_24570 IPR005218 Diacylglycerol/lipid kinase LIT28_24570 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal LIT28_24580 IPR003838 ABC transporter permease protein domain LIT28_24580 IPR027022 ABC transporter permease protein, BceB-type LIT28_24585 IPR003593 AAA+ ATPase domain LIT28_24585 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_24585 IPR003439 ABC transporter-like LIT28_24595 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_24595 IPR023210 NADP-dependent oxidoreductase domain LIT28_24610 IPR032816 SNARE associated Golgi protein LIT28_24615 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site LIT28_24615 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LIT28_24615 IPR011530 Ribosomal RNA adenine dimethylase LIT28_24615 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal LIT28_24615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_24615 IPR023165 rRNA adenine dimethylase-like LIT28_24620 IPR018060 DNA binding HTH domain, AraC-type LIT28_24620 IPR018062 HTH domain AraC-type, conserved site LIT28_24620 IPR020449 Transcription regulator HTH, AraC- type LIT28_24620 IPR003313 AraC-type arabinose-binding/dimerisation domain LIT28_24620 IPR037923 Transcription regulator HTH-like LIT28_24620 IPR009057 Homeobox-like domain superfamily LIT28_24630 IPR027022 ABC transporter permease protein, BceB-type LIT28_24630 IPR003838 ABC transporter permease protein domain LIT28_24635 IPR003593 AAA+ ATPase domain LIT28_24635 IPR003439 ABC transporter-like LIT28_24635 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_24640 IPR009057 Homeobox-like domain superfamily LIT28_24640 IPR011256 Regulatory factor, effector binding domain superfamily LIT28_24640 IPR018060 DNA binding HTH domain, AraC-type LIT28_24640 IPR018062 HTH domain AraC-type, conserved site LIT28_24640 IPR029442 GyrI-like small molecule binding domain LIT28_24640 IPR010499 Bacterial transcription activator, effector binding LIT28_24640 IPR020449 Transcription regulator HTH, AraC- type LIT28_24645 IPR025962 SdpI/YhfL protein family LIT28_24645 IPR026272 Immunity protein SdpI LIT28_24645 IPR012867 Domain of unknown function DUF1648 LIT28_24650 IPR011991 ArsR-like helix-turn-helix domain LIT28_24650 IPR001845 HTH ArsR-type DNA-binding domain LIT28_24650 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_24650 IPR036390 Winged helix DNA-binding domain superfamily LIT28_24655 IPR001789 Signal transduction response regulator, receiver domain LIT28_24655 IPR039420 Transcriptional regulatory protein WalR-like LIT28_24655 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_24655 IPR011006 CheY-like superfamily LIT28_24655 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_24655 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_24660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_24660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_24660 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_24660 IPR005467 Histidine kinase domain LIT28_24660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_24665 IPR027022 ABC transporter permease protein, BceB-type LIT28_24665 IPR003838 ABC transporter permease protein domain LIT28_24670 IPR027022 ABC transporter permease protein, BceB-type LIT28_24670 IPR003838 ABC transporter permease protein domain LIT28_24675 IPR003593 AAA+ ATPase domain LIT28_24675 IPR017871 ABC transporter, conserved site LIT28_24675 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_24675 IPR003439 ABC transporter-like LIT28_24680 IPR003838 ABC transporter permease protein domain LIT28_24680 IPR027022 ABC transporter permease protein, BceB-type LIT28_24690 IPR003474 Gluconate transporter LIT28_24695 IPR036390 Winged helix DNA-binding domain superfamily LIT28_24695 IPR000524 Transcription regulator HTH, GntR LIT28_24695 IPR011663 UbiC transcription regulator-associated LIT28_24695 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_24695 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LIT28_24705 IPR013785 Aldolase-type TIM barrel LIT28_24705 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase LIT28_24710 IPR018319 L-seryl-tRNA selenium transferase-like LIT28_24710 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_24710 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_24710 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like LIT28_24715 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIT28_24715 IPR006680 Amidohydrolase-related LIT28_24715 IPR020043 Deacetylase Atu3266-like LIT28_24715 IPR032466 Metal-dependent hydrolase LIT28_24720 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LIT28_24720 IPR003709 Peptidase M15B LIT28_24725 IPR005467 Histidine kinase domain LIT28_24725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_24725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_24725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_24725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_24725 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_24730 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_24730 IPR011006 CheY-like superfamily LIT28_24730 IPR039420 Transcriptional regulatory protein WalR-like LIT28_24730 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_24730 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_24730 IPR001789 Signal transduction response regulator, receiver domain LIT28_24735 IPR029065 Enolase C-terminal domain-like LIT28_24735 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LIT28_24735 IPR010197 o-Succinylbenzoate synthase, MenC type 2 LIT28_24735 IPR029017 Enolase-like, N-terminal LIT28_24735 IPR036849 Enolase-like, C-terminal domain superfamily LIT28_24735 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LIT28_24740 IPR010192 2-succinylbenzoate--CoA ligase LIT28_24740 IPR042099 AMP-dependent synthetase-like superfamily LIT28_24740 IPR020845 AMP-binding, conserved site LIT28_24740 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_24740 IPR000873 AMP-dependent synthetase/ligase LIT28_24745 IPR029045 ClpP/crotonase-like domain superfamily LIT28_24745 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LIT28_24745 IPR001753 Enoyl-CoA hydratase/isomerase LIT28_24745 IPR014748 Enoyl-CoA hydratase, C-terminal LIT28_24745 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB LIT28_24750 IPR000639 Epoxide hydrolase-like LIT28_24750 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase LIT28_24750 IPR029058 Alpha/Beta hydrolase fold LIT28_24750 IPR000073 Alpha/beta hydrolase fold-1 LIT28_24755 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LIT28_24755 IPR029061 Thiamin diphosphate-binding fold LIT28_24755 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LIT28_24755 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase LIT28_24755 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIT28_24755 IPR032264 Menaquinone biosynthesis protein MenD, middle domain LIT28_24760 IPR005801 ADC synthase LIT28_24760 IPR015890 Chorismate-utilising enzyme, C-terminal LIT28_24760 IPR004561 Isochorismate synthase LIT28_24760 IPR034681 Isochorismate synthase MenF LIT28_24765 IPR026046 UbiA prenyltransferase domain containing protein 1 LIT28_24765 IPR000537 UbiA prenyltransferase family LIT28_24765 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase LIT28_24770 IPR000962 Zinc finger, DksA/TraR C4-type LIT28_24770 IPR037187 DksA, N-terminal domain superfamily LIT28_24770 IPR014240 Regulatory protein, YteA family LIT28_24775 IPR012340 Nucleic acid-binding, OB-fold LIT28_24775 IPR012156 Cold shock, CspA LIT28_24775 IPR011129 Cold shock domain LIT28_24775 IPR019844 Cold-shock (CSD) domain LIT28_24775 IPR002059 Cold-shock protein, DNA-binding LIT28_24785 IPR000944 Transcription regulator Rrf2-type LIT28_24785 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_24785 IPR036390 Winged helix DNA-binding domain superfamily LIT28_24790 IPR003779 Carboxymuconolactone decarboxylase-like LIT28_24790 IPR004675 Alkylhydroperoxidase AhpD core LIT28_24790 IPR029032 AhpD-like LIT28_24800 IPR000182 GNAT domain LIT28_24800 IPR016181 Acyl-CoA N-acyltransferase LIT28_24805 IPR035090 Phosphorylase pyridoxal-phosphate attachment site LIT28_24805 IPR000811 Glycosyl transferase, family 35 LIT28_24805 IPR011833 Glycogen/starch/alpha-glucan phosphorylase LIT28_24810 IPR013534 Starch synthase, catalytic domain LIT28_24810 IPR011835 Bacterial/plant glycogen synthase LIT28_24810 IPR001296 Glycosyl transferase, family 1 LIT28_24815 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit LIT28_24815 IPR011004 Trimeric LpxA-like superfamily LIT28_24815 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_24815 IPR005835 Nucleotidyl transferase domain LIT28_24820 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_24820 IPR005835 Nucleotidyl transferase domain LIT28_24820 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial LIT28_24820 IPR005836 ADP-glucose pyrophosphorylase, conserved site LIT28_24820 IPR011831 Glucose-1-phosphate adenylyltransferase LIT28_24820 IPR011004 Trimeric LpxA-like superfamily LIT28_24825 IPR006047 Glycosyl hydrolase, family 13, catalytic domain LIT28_24825 IPR017853 Glycoside hydrolase superfamily LIT28_24825 IPR013780 Glycosyl hydrolase, all-beta LIT28_24825 IPR004193 Glycoside hydrolase, family 13, N-terminal LIT28_24825 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB LIT28_24825 IPR037439 1,4-alpha-glucan-branching enzyme LIT28_24825 IPR013783 Immunoglobulin-like fold LIT28_24825 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta LIT28_24835 IPR025965 FlgD Ig-like domain LIT28_24835 IPR000209 Peptidase S8/S53 domain LIT28_24835 IPR036852 Peptidase S8/S53 domain superfamily LIT28_24835 IPR023827 Peptidase S8, subtilisin, Asp-active site LIT28_24835 IPR022398 Peptidase S8, subtilisin, His-active site LIT28_24835 IPR023828 Peptidase S8, subtilisin, Ser-active site LIT28_24835 IPR015500 Peptidase S8, subtilisin-related LIT28_24835 IPR034213 Vpr-like peptidase, catalytic domain LIT28_24835 IPR003137 PA domain LIT28_24835 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily LIT28_24835 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 LIT28_24840 IPR036291 NAD(P)-binding domain superfamily LIT28_24840 IPR001557 L-lactate/malate dehydrogenase LIT28_24840 IPR001236 Lactate/malate dehydrogenase, N-terminal LIT28_24840 IPR018177 L-lactate dehydrogenase, active site LIT28_24840 IPR022383 Lactate/malate dehydrogenase, C-terminal LIT28_24840 IPR011304 L-lactate dehydrogenase LIT28_24840 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LIT28_24850 IPR039425 RNA polymerase sigma-70 like LIT28_24850 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_24850 IPR013325 RNA polymerase sigma factor, region 2 LIT28_24850 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_24850 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_24850 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LIT28_24850 IPR007627 RNA polymerase sigma-70 region 2 LIT28_24850 IPR014284 RNA polymerase sigma-70 like domain LIT28_24945 IPR027304 Trigger factor/SurA domain superfamily LIT28_24945 IPR036611 Trigger factor ribosome-binding domain superfamily LIT28_24945 IPR008881 Trigger factor, ribosome-binding, bacterial LIT28_24945 IPR008880 Trigger factor, C-terminal LIT28_24945 IPR005215 Trigger factor LIT28_24945 IPR037041 Trigger factor, C-terminal domain superfamily LIT28_24980 IPR003416 MgtC/SapB/SrpB/YhiD family LIT28_24985 IPR036291 NAD(P)-binding domain superfamily LIT28_24985 IPR003148 Regulator of K+ conductance, N-terminal LIT28_24985 IPR013099 Potassium channel domain LIT28_24990 IPR014967 Uncharacterised protein family, YugN-like LIT28_24990 IPR036491 YugN-like superfamily LIT28_24995 IPR035482 Phosphoglucose isomerase, SIS domain 2 LIT28_24995 IPR001672 Phosphoglucose isomerase (PGI) LIT28_24995 IPR018189 Phosphoglucose isomerase, conserved site LIT28_24995 IPR035476 Phosphoglucose isomerase, SIS domain 1 LIT28_25000 IPR007211 Protein of unknown function DUF378 LIT28_25005 IPR012340 Nucleic acid-binding, OB-fold LIT28_25005 IPR022967 RNA-binding domain, S1 LIT28_25005 IPR003029 S1 domain LIT28_25010 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_25010 IPR004839 Aminotransferase, class I/classII LIT28_25010 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LIT28_25010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_25010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_25015 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_25015 IPR036390 Winged helix DNA-binding domain superfamily LIT28_25015 IPR000485 AsnC-type HTH domain LIT28_25015 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LIT28_25015 IPR011008 Dimeric alpha-beta barrel LIT28_25015 IPR019888 Transcription regulator AsnC-type LIT28_25020 IPR036291 NAD(P)-binding domain superfamily LIT28_25020 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT28_25020 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LIT28_25020 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LIT28_25020 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LIT28_25025 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal LIT28_25025 IPR000639 Epoxide hydrolase-like LIT28_25025 IPR000073 Alpha/beta hydrolase fold-1 LIT28_25025 IPR029058 Alpha/Beta hydrolase fold LIT28_25035 IPR027619 Putative C-S lyase LIT28_25035 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_25035 IPR004839 Aminotransferase, class I/classII LIT28_25035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_25035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_25050 IPR014916 Kinase associated protein B LIT28_25050 IPR038080 Kinase associated protein B superfamily LIT28_25055 IPR013520 Exonuclease, RNase T/DNA polymerase III LIT28_25055 IPR012337 Ribonuclease H-like superfamily LIT28_25055 IPR036397 Ribonuclease H superfamily LIT28_25060 IPR000802 Arsenical pump membrane protein, ArsB LIT28_25060 IPR004680 Citrate transporter-like domain LIT28_25075 IPR033731 Glycyl-tRNA synthetase-like core domain LIT28_25075 IPR002315 Glycyl-tRNA synthetase LIT28_25075 IPR022961 Glycine-tRNA ligase, bacterial LIT28_25075 IPR006195 Aminoacyl-tRNA synthetase, class II LIT28_25075 IPR036621 Anticodon-binding domain superfamily LIT28_25075 IPR004154 Anticodon-binding LIT28_25075 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIT28_25075 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 LIT28_25080 IPR029069 HotDog domain superfamily LIT28_25080 IPR003736 Phenylacetic acid degradation-related domain LIT28_25080 IPR006683 Thioesterase domain LIT28_25090 IPR003784 BioY protein LIT28_25095 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type LIT28_25095 IPR005835 Nucleotidyl transferase domain LIT28_25095 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_25100 IPR005841 Alpha-D-phosphohexomutase superfamily LIT28_25100 IPR016066 Alpha-D-phosphohexomutase, conserved site LIT28_25100 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily LIT28_25100 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II LIT28_25100 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III LIT28_25100 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III LIT28_25100 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I LIT28_25100 IPR005843 Alpha-D-phosphohexomutase, C-terminal LIT28_25105 IPR003390 DNA integrity scanning protein, DisA, N-terminal LIT28_25105 IPR014046 Diadenylate cyclase LIT28_25105 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily LIT28_25105 IPR019457 Uncharacterised domain YojJ, N-terminal LIT28_25105 IPR034693 Diadenylate cyclase CdaS LIT28_25110 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal LIT28_25110 IPR023042 Peptidase M17, leucine aminopeptidase LIT28_25110 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LIT28_25110 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LIT28_25115 IPR010611 3D domain LIT28_25115 IPR036908 RlpA-like domain superfamily LIT28_25125 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_25125 IPR020476 NUDIX hydrolase LIT28_25125 IPR023214 HAD superfamily LIT28_25125 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_25125 IPR020084 NUDIX hydrolase, conserved site LIT28_25125 IPR000086 NUDIX hydrolase domain LIT28_25125 IPR036412 HAD-like superfamily LIT28_25130 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_25130 IPR023753 FAD/NAD(P)-binding domain LIT28_25135 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_25135 IPR023753 FAD/NAD(P)-binding domain LIT28_25135 IPR022890 Ferredoxin--NADP reductase, type 2 LIT28_25140 IPR010499 Bacterial transcription activator, effector binding LIT28_25140 IPR029442 GyrI-like small molecule binding domain LIT28_25140 IPR011256 Regulatory factor, effector binding domain superfamily LIT28_25155 IPR007553 Domain of unknown function DUF523 LIT28_25175 IPR000361 FeS cluster biogenesis LIT28_25175 IPR016092 FeS cluster insertion protein LIT28_25175 IPR017870 FeS cluster insertion, C-terminal, conserved site LIT28_25175 IPR035903 HesB-like domain superfamily LIT28_25180 IPR018510 Diaminopimelate epimerase, active site LIT28_25180 IPR001653 Diaminopimelate epimerase, DapF LIT28_25185 IPR009910 Protein of unknown function DUF1450 LIT28_25185 IPR022916 Protein of unknown function UPF0349 LIT28_25190 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_25190 IPR023753 FAD/NAD(P)-binding domain LIT28_25200 IPR039421 Type I protein exporter LIT28_25200 IPR005074 Peptidase C39, bacteriocin processing LIT28_25200 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_25200 IPR017871 ABC transporter, conserved site LIT28_25200 IPR003439 ABC transporter-like LIT28_25200 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_25200 IPR011527 ABC transporter type 1, transmembrane domain LIT28_25200 IPR005897 Peptidase C39, ABC-type bacteriocin transporter LIT28_25200 IPR003593 AAA+ ATPase domain LIT28_25205 IPR005226 UPF0014 family LIT28_25210 IPR004624 PhnA protein LIT28_25210 IPR013988 PhnA protein, C-terminal LIT28_25210 IPR013987 PhnA protein, N-terminal LIT28_25225 IPR025184 Domain of unknown function DUF4111 LIT28_25225 IPR002934 Polymerase, nucleotidyl transferase domain LIT28_25230 IPR009190 Protein of unknown function DUF1462 LIT28_25230 IPR036249 Thioredoxin-like superfamily LIT28_25230 IPR038218 YuzD-like superfamily LIT28_25235 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal LIT28_25235 IPR034904 Fe-S cluster assembly domain superfamily LIT28_25245 IPR011009 Protein kinase-like domain superfamily LIT28_25245 IPR014254 Spore coat protein YutH LIT28_25250 IPR036681 PgpA-like superfamily LIT28_25250 IPR026038 Putative phosphatidylglycerophosphatase LIT28_25250 IPR007686 YutG/PgpA domain LIT28_25265 IPR017871 ABC transporter, conserved site LIT28_25265 IPR003593 AAA+ ATPase domain LIT28_25265 IPR003838 ABC transporter permease protein domain LIT28_25265 IPR003439 ABC transporter-like LIT28_25265 IPR017911 ABC transporter, macrolide export, ATP-binding domain LIT28_25265 IPR025857 MacB-like periplasmic core domain LIT28_25265 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_25270 IPR029039 Flavoprotein-like superfamily LIT28_25270 IPR003680 Flavodoxin-like fold LIT28_25280 IPR006357 HAD-superfamily hydrolase, subfamily IIA LIT28_25280 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 LIT28_25280 IPR023214 HAD superfamily LIT28_25280 IPR036412 HAD-like superfamily LIT28_25290 IPR008201 Protein of unknown function DUF86 LIT28_25290 IPR037038 Bsu32300-like superfamily LIT28_25295 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase LIT28_25310 IPR009370 Protein of unknown function DUF1027 LIT28_25310 IPR038141 YutD-like superfamily LIT28_25315 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like LIT28_25325 IPR036397 Ribonuclease H superfamily LIT28_25325 IPR012337 Ribonuclease H-like superfamily LIT28_25325 IPR001584 Integrase, catalytic core LIT28_25325 IPR025948 HTH-like domain LIT28_25325 IPR038965 Transposase InsF-like LIT28_25330 IPR000551 MerR-type HTH domain LIT28_25330 IPR009061 Putative DNA-binding domain superfamily LIT28_25330 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain LIT28_25330 IPR012925 TipAS antibiotic-recognition domain LIT28_25335 IPR011397 Intramembrane metalloprotease YhfC LIT28_25355 IPR031691 Lipoyl synthase, N-terminal LIT28_25355 IPR013785 Aldolase-type TIM barrel LIT28_25355 IPR003698 Lipoyl synthase LIT28_25355 IPR006638 Elp3/MiaB/NifB LIT28_25355 IPR007197 Radical SAM LIT28_25360 IPR016047 Peptidase M23 LIT28_25360 IPR011055 Duplicated hybrid motif LIT28_25370 IPR014931 Protein of unknown function DUF1805 LIT28_25370 IPR036493 Hypothetical protein YunC superfamily LIT28_25375 IPR008334 5'-Nucleotidase, C-terminal LIT28_25375 IPR006179 5'-Nucleotidase/apyrase LIT28_25375 IPR029052 Metallo-dependent phosphatase-like LIT28_25375 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LIT28_25375 IPR011240 Phosphoesterase-related protein YunD LIT28_25380 IPR011991 ArsR-like helix-turn-helix domain LIT28_25380 IPR005149 Transcription regulator PadR, N-terminal LIT28_25380 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_25380 IPR036390 Winged helix DNA-binding domain superfamily LIT28_25385 IPR006976 VanZ-like LIT28_25390 IPR000825 SUF system FeS cluster assembly, SufBD LIT28_25390 IPR010231 SUF system FeS cluster assembly, SufB LIT28_25390 IPR037284 SUF system FeS cluster assembly, SufBD superfamily LIT28_25395 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal LIT28_25400 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_25400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_25400 IPR010970 Cysteine desulfurase, SufS LIT28_25400 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LIT28_25400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_25400 IPR016454 Cysteine desulfurase LIT28_25400 IPR000192 Aminotransferase class V domain LIT28_25405 IPR011542 SUF system FeS cluster assembly, SufD LIT28_25405 IPR000825 SUF system FeS cluster assembly, SufBD LIT28_25405 IPR037284 SUF system FeS cluster assembly, SufBD superfamily LIT28_25410 IPR017871 ABC transporter, conserved site LIT28_25410 IPR003593 AAA+ ATPase domain LIT28_25410 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_25410 IPR010230 FeS cluster assembly SUF system, ATPase SufC LIT28_25410 IPR003439 ABC transporter-like LIT28_25415 IPR004872 Lipoprotein NlpA family LIT28_25420 IPR004872 Lipoprotein NlpA family LIT28_25425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIT28_25425 IPR035906 MetI-like superfamily LIT28_25430 IPR003439 ABC transporter-like LIT28_25430 IPR003593 AAA+ ATPase domain LIT28_25430 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal LIT28_25430 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain LIT28_25430 IPR018449 NIL domain LIT28_25430 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_25430 IPR017871 ABC transporter, conserved site LIT28_25440 IPR013766 Thioredoxin domain LIT28_25440 IPR036249 Thioredoxin-like superfamily LIT28_25445 IPR034141 Ribonuclease M5-like, TOPRIM domain LIT28_25445 IPR006171 TOPRIM domain LIT28_25455 IPR000089 Biotin/lipoyl attachment LIT28_25455 IPR017453 Glycine cleavage system H-protein, subgroup LIT28_25455 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LIT28_25455 IPR002930 Glycine cleavage system H-protein LIT28_25455 IPR033753 Glycine cleavage system H-protein/Simiate LIT28_25455 IPR011053 Single hybrid motif LIT28_25460 IPR006504 Transcriptional regulator Spx/MgsR LIT28_25460 IPR036249 Thioredoxin-like superfamily LIT28_25460 IPR006660 Arsenate reductase-like LIT28_25505 IPR001236 Lactate/malate dehydrogenase, N-terminal LIT28_25505 IPR022383 Lactate/malate dehydrogenase, C-terminal LIT28_25505 IPR018177 L-lactate dehydrogenase, active site LIT28_25505 IPR011304 L-lactate dehydrogenase LIT28_25505 IPR001557 L-lactate/malate dehydrogenase LIT28_25505 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LIT28_25505 IPR036291 NAD(P)-binding domain superfamily LIT28_25520 IPR009057 Homeobox-like domain superfamily LIT28_25520 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_25520 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) LIT28_25520 IPR001647 DNA-binding HTH domain, TetR-type LIT28_25525 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_25525 IPR001279 Metallo-beta-lactamase LIT28_25530 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIT28_25530 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIT28_25530 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIT28_25530 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIT28_25530 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIT28_25530 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIT28_25530 IPR006089 Acyl-CoA dehydrogenase, conserved site LIT28_25535 IPR020616 Thiolase, N-terminal LIT28_25535 IPR002155 Thiolase LIT28_25535 IPR020617 Thiolase, C-terminal LIT28_25535 IPR020610 Thiolase, active site LIT28_25535 IPR020615 Thiolase, acyl-enzyme intermediate active site LIT28_25535 IPR016039 Thiolase-like LIT28_25535 IPR020613 Thiolase, conserved site LIT28_25540 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LIT28_25540 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LIT28_25540 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_25540 IPR029045 ClpP/crotonase-like domain superfamily LIT28_25540 IPR001753 Enoyl-CoA hydratase/isomerase LIT28_25540 IPR036291 NAD(P)-binding domain superfamily LIT28_25540 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_25545 IPR025625 YuzL-like protein LIT28_25550 IPR012338 Beta-lactamase/transpeptidase-like LIT28_25550 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIT28_25550 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIT28_25550 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIT28_25555 IPR029041 FAD-linked oxidoreductase-like LIT28_25555 IPR008219 Proline dehydrogenase, bacteria and archaea LIT28_25555 IPR002872 Proline dehydrogenase domain LIT28_25555 IPR015659 Proline oxidase family LIT28_25560 IPR020393 Uncharacterised protein family YusU LIT28_25565 IPR029756 MTH1187/YkoF-like LIT28_25565 IPR002767 Thiamine-binding protein LIT28_25570 IPR033479 Double Cache domain 1 LIT28_25570 IPR003660 HAMP domain LIT28_25570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_25570 IPR029151 Periplasmic sensor-like domain superfamily LIT28_25590 IPR036259 MFS transporter superfamily LIT28_25590 IPR020846 Major facilitator superfamily domain LIT28_25590 IPR011701 Major facilitator superfamily LIT28_25595 IPR002293 Amino acid/polyamine transporter I LIT28_25605 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 LIT28_25605 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LIT28_25605 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes LIT28_25615 IPR003740 Uncharacterised membrane protein YitT LIT28_25615 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIT28_25615 IPR019264 Domain of unknown function DUF2179 LIT28_25650 IPR032816 SNARE associated Golgi protein LIT28_25660 IPR005490 L,D-transpeptidase catalytic domain LIT28_25660 IPR041597 L,D-transpeptidase C-terminal domain LIT28_25660 IPR038063 L,D-transpeptidase catalytic domain-like LIT28_25665 IPR011006 CheY-like superfamily LIT28_25665 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_25665 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_25665 IPR001789 Signal transduction response regulator, receiver domain LIT28_25665 IPR039420 Transcriptional regulatory protein WalR-like LIT28_25665 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_25670 IPR031967 PhoR, single Cache-like domain LIT28_25670 IPR013767 PAS fold LIT28_25670 IPR035965 PAS domain superfamily LIT28_25670 IPR000014 PAS domain LIT28_25670 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_25670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_25670 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_25670 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_25670 IPR005467 Histidine kinase domain LIT28_25670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_25680 IPR023458 Methionine-tRNA ligase, type 1 LIT28_25680 IPR033911 Methioninyl-tRNA synthetase core domain LIT28_25680 IPR029038 Methionyl-tRNA synthetase, Zn-domain LIT28_25680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_25680 IPR015413 Methionyl/Leucyl tRNA synthetase LIT28_25680 IPR014758 Methionyl-tRNA synthetase LIT28_25680 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain LIT28_25680 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_25680 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIT28_25680 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LIT28_25690 IPR004090 Chemotaxis methyl-accepting receptor LIT28_25690 IPR033479 Double Cache domain 1 LIT28_25690 IPR000727 Target SNARE coiled-coil homology domain LIT28_25690 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_25690 IPR029151 Periplasmic sensor-like domain superfamily LIT28_25690 IPR003660 HAMP domain LIT28_25695 IPR029151 Periplasmic sensor-like domain superfamily LIT28_25695 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_25695 IPR003660 HAMP domain LIT28_25695 IPR033479 Double Cache domain 1 LIT28_25695 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding LIT28_25700 IPR034904 Fe-S cluster assembly domain superfamily LIT28_25700 IPR002744 MIP18 family-like LIT28_25705 IPR001570 Peptidase M4, C-terminal LIT28_25705 IPR025711 PepSY domain LIT28_25705 IPR013856 Peptidase M4 domain LIT28_25705 IPR011096 FTP domain LIT28_25705 IPR027268 Peptidase M4/M1, CTD superfamily LIT28_25705 IPR023612 Peptidase M4 LIT28_25710 IPR011051 RmlC-like cupin domain superfamily LIT28_25710 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain LIT28_25710 IPR003829 Pirin, N-terminal domain LIT28_25710 IPR014710 RmlC-like jelly roll fold LIT28_25710 IPR012093 Pirin LIT28_25715 IPR011991 ArsR-like helix-turn-helix domain LIT28_25715 IPR000835 MarR-type HTH domain LIT28_25715 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_25715 IPR036390 Winged helix DNA-binding domain superfamily LIT28_25725 IPR006153 Cation/H+ exchanger LIT28_25725 IPR038770 Sodium/solute symporter superfamily LIT28_25730 IPR006037 Regulator of K+ conductance, C-terminal LIT28_25730 IPR026278 Potassium/proton antiporter subunit KhtT LIT28_25730 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LIT28_25735 IPR001463 Sodium:alanine symporter LIT28_25740 IPR008331 Ferritin/DPS protein domain LIT28_25740 IPR009078 Ferritin-like superfamily LIT28_25740 IPR012347 Ferritin-like LIT28_25740 IPR002177 DNA-binding protein Dps LIT28_25740 IPR023188 DNA-binding protein Dps, conserved site LIT28_25755 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG LIT28_25755 IPR031100 LOG family LIT28_25765 IPR009040 Ferritin-like diiron domain LIT28_25765 IPR009078 Ferritin-like superfamily LIT28_25765 IPR008331 Ferritin/DPS protein domain LIT28_25765 IPR041719 Ferritin, prokaryotic-type LIT28_25765 IPR001519 Ferritin LIT28_25765 IPR012347 Ferritin-like LIT28_25775 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LIT28_25775 IPR008276 Concentrative nucleoside transporter LIT28_25775 IPR002668 Concentrative nucleoside transporter N-terminal domain LIT28_25775 IPR011657 Concentrative nucleoside transporter C-terminal domain LIT28_25780 IPR008276 Concentrative nucleoside transporter LIT28_25780 IPR002668 Concentrative nucleoside transporter N-terminal domain LIT28_25780 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LIT28_25780 IPR011657 Concentrative nucleoside transporter C-terminal domain LIT28_25785 IPR001463 Sodium:alanine symporter LIT28_25790 IPR001463 Sodium:alanine symporter LIT28_25795 IPR016040 NAD(P)-binding domain LIT28_25795 IPR036291 NAD(P)-binding domain superfamily LIT28_25810 IPR023210 NADP-dependent oxidoreductase domain LIT28_25810 IPR018170 Aldo/keto reductase, conserved site LIT28_25810 IPR036812 NADP-dependent oxidoreductase domain superfamily LIT28_25810 IPR020471 Aldo/keto reductase LIT28_25815 IPR036259 MFS transporter superfamily LIT28_25815 IPR020846 Major facilitator superfamily domain LIT28_25815 IPR011701 Major facilitator superfamily LIT28_25820 IPR036390 Winged helix DNA-binding domain superfamily LIT28_25820 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_25820 IPR002577 Helix-turn-helix, HxlR type LIT28_25825 IPR012440 Protein of unknown function DUF1641 LIT28_25830 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_25830 IPR023753 FAD/NAD(P)-binding domain LIT28_25835 IPR002307 Tyrosine-tRNA ligase LIT28_25835 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_25835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_25835 IPR002305 Aminoacyl-tRNA synthetase, class Ic LIT28_25835 IPR002942 RNA-binding S4 domain LIT28_25835 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 LIT28_25835 IPR024088 Tyrosine-tRNA ligase, bacterial-type LIT28_25835 IPR036986 RNA-binding S4 domain superfamily LIT28_25840 IPR006094 FAD linked oxidase, N-terminal LIT28_25840 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily LIT28_25840 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal LIT28_25840 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase LIT28_25840 IPR016169 FAD-binding, type PCMH, subdomain 2 LIT28_25840 IPR016167 FAD-binding, type PCMH, subdomain 1 LIT28_25840 IPR036318 FAD-binding, type PCMH-like superfamily LIT28_25840 IPR016166 FAD-binding domain, PCMH-type LIT28_25850 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_25850 IPR003660 HAMP domain LIT28_25850 IPR004090 Chemotaxis methyl-accepting receptor LIT28_25860 IPR003691 Putative fluoride ion transporter CrcB LIT28_25865 IPR003691 Putative fluoride ion transporter CrcB LIT28_25880 IPR000182 GNAT domain LIT28_25880 IPR016181 Acyl-CoA N-acyltransferase LIT28_25885 IPR009315 Phosphate-starvation-induced PsiE LIT28_25885 IPR020948 Phosphate-starvation-induced PsiE-like LIT28_25900 IPR003593 AAA+ ATPase domain LIT28_25900 IPR003439 ABC transporter-like LIT28_25900 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_25905 IPR037294 ABC transporter, BtuC-like LIT28_25905 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_25910 IPR037294 ABC transporter, BtuC-like LIT28_25910 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_25920 IPR039420 Transcriptional regulatory protein WalR-like LIT28_25920 IPR001789 Signal transduction response regulator, receiver domain LIT28_25920 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_25920 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_25920 IPR011006 CheY-like superfamily LIT28_25920 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_25935 IPR000037 SsrA-binding protein LIT28_25935 IPR020081 SsrA-binding protein, conserved site LIT28_25935 IPR023620 Small protein B LIT28_25940 IPR012340 Nucleic acid-binding, OB-fold LIT28_25940 IPR013223 Ribonuclease B, N-terminal OB domain LIT28_25940 IPR001900 Ribonuclease II/R LIT28_25940 IPR022966 Ribonuclease II/R, conserved site LIT28_25940 IPR004476 Ribonuclease II/ribonuclease R LIT28_25940 IPR011129 Cold shock domain LIT28_25940 IPR003029 S1 domain LIT28_25940 IPR040476 RNase II/RNase R, cold shock domain LIT28_25940 IPR022967 RNA-binding domain, S1 LIT28_25940 IPR011805 Ribonuclease R LIT28_25945 IPR029058 Alpha/Beta hydrolase fold LIT28_25945 IPR012354 Esterase/lipase LIT28_25945 IPR022742 Serine aminopeptidase, S33 LIT28_25950 IPR004692 Preprotein translocase SecG subunit LIT28_25955 IPR007300 CidB/LrgB family LIT28_25960 IPR005538 LrgA/CidA family LIT28_25960 IPR023760 Holin-like protein CidA LIT28_25965 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA LIT28_25965 IPR036452 Ribonucleoside hydrolase-like LIT28_25965 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LIT28_25965 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LIT28_25965 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site LIT28_25970 IPR020809 Enolase, conserved site LIT28_25970 IPR020810 Enolase, C-terminal TIM barrel domain LIT28_25970 IPR029017 Enolase-like, N-terminal LIT28_25970 IPR036849 Enolase-like, C-terminal domain superfamily LIT28_25970 IPR020811 Enolase, N-terminal LIT28_25970 IPR000941 Enolase LIT28_25975 IPR006124 Metalloenzyme LIT28_25975 IPR011258 BPG-independent PGAM, N-terminal LIT28_25975 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIT28_25975 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily LIT28_25975 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent LIT28_25980 IPR013785 Aldolase-type TIM barrel LIT28_25980 IPR035990 Triosephosphate isomerase superfamily LIT28_25980 IPR020861 Triosephosphate isomerase, active site LIT28_25980 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic LIT28_25980 IPR000652 Triosephosphate isomerase LIT28_25985 IPR015824 Phosphoglycerate kinase, N-terminal LIT28_25985 IPR036043 Phosphoglycerate kinase superfamily LIT28_25985 IPR001576 Phosphoglycerate kinase LIT28_25985 IPR015911 Phosphoglycerate kinase, conserved site LIT28_25990 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I LIT28_25990 IPR036291 NAD(P)-binding domain superfamily LIT28_25990 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LIT28_25990 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LIT28_25990 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site LIT28_25990 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LIT28_25995 IPR007324 Sugar-binding domain, putative LIT28_25995 IPR037171 NagB/RpiA transferase-like LIT28_25995 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_25995 IPR036390 Winged helix DNA-binding domain superfamily LIT28_26005 IPR000394 RNA polymerase sigma factor 54 LIT28_26005 IPR007046 RNA polymerase sigma factor 54, core-binding domain LIT28_26005 IPR007634 RNA polymerase sigma factor 54, DNA-binding LIT28_26005 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily LIT28_26025 IPR014203 Sporulation stage V, protein AC LIT28_26025 IPR005562 SpoVA LIT28_26030 IPR016039 Thiolase-like LIT28_26030 IPR038369 Stage V sporulation AD superfamily LIT28_26030 IPR010894 Stage V sporulation AD LIT28_26035 IPR005562 SpoVA LIT28_26035 IPR014204 Sporulation stage V, protein AE LIT28_26045 IPR023090 UPF0702, alpha/beta domain superfamily LIT28_26045 IPR007353 Protein of unknown function DUF421 LIT28_26050 IPR001907 ATP-dependent Clp protease proteolytic subunit LIT28_26050 IPR029045 ClpP/crotonase-like domain superfamily LIT28_26050 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LIT28_26050 IPR033135 ClpP, histidine active site LIT28_26050 IPR018215 ClpP, Ser active site LIT28_26055 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LIT28_26055 IPR000032 Phosphocarrier protein HPr-like LIT28_26055 IPR035895 HPr-like superfamily LIT28_26060 IPR027434 Homing endonuclease LIT28_26060 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain LIT28_26060 IPR039518 WhiA, LAGLIDADG-like domain LIT28_26060 IPR023054 Sporulation regulator WhiA, C-terminal LIT28_26060 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_26060 IPR003802 Sporulation regulator WhiA LIT28_26065 IPR038136 Gluconeogenesis factor superfamily LIT28_26065 IPR010119 Gluconeogenesis factor LIT28_26065 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 LIT28_26070 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26070 IPR005337 RapZ-like family LIT28_26075 IPR000086 NUDIX hydrolase domain LIT28_26075 IPR020476 NUDIX hydrolase LIT28_26075 IPR015797 NUDIX hydrolase-like domain superfamily LIT28_26085 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_26085 IPR023753 FAD/NAD(P)-binding domain LIT28_26085 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site LIT28_26085 IPR005982 Thioredoxin reductase LIT28_26090 IPR013026 Tetratricopeptide repeat-containing domain LIT28_26090 IPR011990 Tetratricopeptide-like helical domain superfamily LIT28_26090 IPR019734 Tetratricopeptide repeat LIT28_26095 IPR001451 Hexapeptide repeat LIT28_26095 IPR011004 Trimeric LpxA-like superfamily LIT28_26100 IPR023214 HAD superfamily LIT28_26100 IPR023733 Pyrophosphatase PpaX LIT28_26100 IPR036412 HAD-like superfamily LIT28_26100 IPR006439 HAD hydrolase, subfamily IA LIT28_26100 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_26100 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LIT28_26100 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_26105 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt LIT28_26110 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily LIT28_26110 IPR011104 HPr kinase/phosphorylase, C-terminal LIT28_26110 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal LIT28_26110 IPR003755 HPr(Ser) kinase/phosphorylase LIT28_26115 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV LIT28_26125 IPR041102 UvrA, interaction domain LIT28_26125 IPR041552 UvrA DNA-binding domain LIT28_26125 IPR004602 UvrABC system subunit A LIT28_26125 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26125 IPR017871 ABC transporter, conserved site LIT28_26125 IPR003439 ABC transporter-like LIT28_26125 IPR003593 AAA+ ATPase domain LIT28_26130 IPR006935 Helicase/UvrB, N-terminal LIT28_26130 IPR041471 UvrB, interaction domain LIT28_26130 IPR004807 UvrABC system, subunit B LIT28_26130 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_26130 IPR001650 Helicase, C-terminal LIT28_26130 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26130 IPR001943 UVR domain LIT28_26130 IPR036876 UVR domain superfamily LIT28_26130 IPR024759 UvrB, YAD/RRR-motif-containing domain LIT28_26145 IPR009061 Putative DNA-binding domain superfamily LIT28_26145 IPR000551 MerR-type HTH domain LIT28_26145 IPR012925 TipAS antibiotic-recognition domain LIT28_26145 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain LIT28_26170 IPR018383 Uncharacterised protein family UPF0324, prokaryote LIT28_26175 IPR000847 Transcription regulator HTH, LysR LIT28_26175 IPR036390 Winged helix DNA-binding domain superfamily LIT28_26175 IPR005119 LysR, substrate-binding LIT28_26175 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_26180 IPR009061 Putative DNA-binding domain superfamily LIT28_26180 IPR000551 MerR-type HTH domain LIT28_26180 IPR015358 Transcription regulator MerR, DNA binding LIT28_26180 IPR011789 Cu(I)-responsive transcriptional regulator LIT28_26185 IPR029039 Flavoprotein-like superfamily LIT28_26185 IPR005025 NADPH-dependent FMN reductase-like LIT28_26190 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26190 IPR003439 ABC transporter-like LIT28_26190 IPR032781 ABC-transporter extension domain LIT28_26190 IPR003593 AAA+ ATPase domain LIT28_26195 IPR035439 UPF0145 domain superfamily LIT28_26195 IPR002765 Uncharacterised protein family UPF0145 LIT28_26200 IPR003439 ABC transporter-like LIT28_26200 IPR039421 Type I protein exporter LIT28_26200 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26200 IPR017871 ABC transporter, conserved site LIT28_26200 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_26200 IPR011527 ABC transporter type 1, transmembrane domain LIT28_26200 IPR003593 AAA+ ATPase domain LIT28_26205 IPR036034 PDZ superfamily LIT28_26205 IPR041489 PDZ domain 6 LIT28_26205 IPR001478 PDZ domain LIT28_26210 IPR005151 Tail specific protease LIT28_26210 IPR036366 PGBD superfamily LIT28_26210 IPR036365 PGBD-like superfamily LIT28_26210 IPR002477 Peptidoglycan binding-like LIT28_26210 IPR004447 C-terminal-processing peptidase S41A LIT28_26210 IPR029045 ClpP/crotonase-like domain superfamily LIT28_26210 IPR041489 PDZ domain 6 LIT28_26210 IPR001478 PDZ domain LIT28_26210 IPR036034 PDZ superfamily LIT28_26215 IPR040690 FtsX, extracellular domain LIT28_26215 IPR003838 ABC transporter permease protein domain LIT28_26215 IPR004513 Cell division protein FtsX LIT28_26220 IPR005286 Cell division protein FtsE, ATP-binding LIT28_26220 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26220 IPR003439 ABC transporter-like LIT28_26220 IPR017871 ABC transporter, conserved site LIT28_26220 IPR003593 AAA+ ATPase domain LIT28_26235 IPR036266 SecA, Wing/Scaffold superfamily LIT28_26235 IPR036670 SecA, preprotein cross-linking domain superfamily LIT28_26235 IPR011116 SecA Wing/Scaffold LIT28_26235 IPR011130 SecA, preprotein cross-linking domain LIT28_26235 IPR011115 SecA DEAD-like, N-terminal LIT28_26235 IPR020937 SecA conserved site LIT28_26235 IPR014018 SecA motor DEAD LIT28_26235 IPR000185 Protein translocase subunit SecA LIT28_26235 IPR004027 SEC-C motif LIT28_26235 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26240 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily LIT28_26240 IPR034694 Ribosome hibernation promoting factor, long/plastid LIT28_26240 IPR036567 Ribosome hibernation promotion factor-like LIT28_26240 IPR003489 Ribosome hibernation promoting factor/RaiA LIT28_26240 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal LIT28_26245 IPR019844 Cold-shock (CSD) domain LIT28_26245 IPR002059 Cold-shock protein, DNA-binding LIT28_26245 IPR012340 Nucleic acid-binding, OB-fold LIT28_26245 IPR011129 Cold shock domain LIT28_26245 IPR012156 Cold shock, CspA LIT28_26250 IPR000836 Phosphoribosyltransferase domain LIT28_26250 IPR029057 Phosphoribosyltransferase-like LIT28_26250 IPR005222 Competence protein ComF LIT28_26255 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_26255 IPR001650 Helicase, C-terminal LIT28_26255 IPR006935 Helicase/UvrB, N-terminal LIT28_26255 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26260 IPR018392 LysM domain LIT28_26260 IPR036779 LysM domain superfamily LIT28_26260 IPR000064 Endopeptidase, NLPC/P60 domain LIT28_26260 IPR038765 Papain-like cysteine peptidase superfamily LIT28_26265 IPR002577 Helix-turn-helix, HxlR type LIT28_26265 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_26265 IPR036390 Winged helix DNA-binding domain superfamily LIT28_26270 IPR003797 DegV LIT28_26275 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_26275 IPR036956 Impact, N-terminal domain superfamily LIT28_26275 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site LIT28_26275 IPR035647 EF-G domain III/V-like LIT28_26275 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal LIT28_26275 IPR023582 Impact family LIT28_26275 IPR001498 Impact, N-terminal LIT28_26275 IPR015796 Impact family, bacterial/archaeal LIT28_26280 IPR004474 Cell envelope-related transcriptional attenuator domain LIT28_26285 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like LIT28_26285 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain LIT28_26290 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type LIT28_26290 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal LIT28_26290 IPR036291 NAD(P)-binding domain superfamily LIT28_26290 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily LIT28_26290 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal LIT28_26290 IPR017476 UDP-glucose/GDP-mannose dehydrogenase LIT28_26290 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation LIT28_26290 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_26295 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site LIT28_26295 IPR000715 Glycosyl transferase, family 4 LIT28_26300 IPR002509 NodB homology domain LIT28_26300 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_26305 IPR036390 Winged helix DNA-binding domain superfamily LIT28_26305 IPR001550 Transcription antiterminator, conserved site LIT28_26305 IPR011608 PRD domain LIT28_26305 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LIT28_26305 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26305 IPR033887 PTS system mannose/sorbose specific IIA subunit LIT28_26305 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily LIT28_26305 IPR004701 Phosphotransferase system, mannose-type IIA component LIT28_26305 IPR003593 AAA+ ATPase domain LIT28_26305 IPR002078 RNA polymerase sigma factor 54 interaction domain LIT28_26305 IPR036634 PRD domain superfamily LIT28_26315 IPR014047 Chromate transporter, long chain LIT28_26315 IPR003370 Chromate transporter LIT28_26320 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria LIT28_26320 IPR006879 Carbohydrate deacetylase YdjC-like LIT28_26320 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_26325 IPR001088 Glycoside hydrolase, family 4 LIT28_26325 IPR022616 Glycosyl hydrolase, family 4, C-terminal LIT28_26325 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LIT28_26325 IPR036291 NAD(P)-binding domain superfamily LIT28_26325 IPR019802 Glycoside hydrolase, family 4, conserved site LIT28_26330 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit LIT28_26330 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily LIT28_26335 IPR004796 Phosphotransferase system, cellobiose-type IIC component LIT28_26335 IPR004501 Phosphotransferase system, EIIC component, type 3 LIT28_26335 IPR003352 Phosphotransferase system, EIIC LIT28_26340 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LIT28_26340 IPR013012 Phosphotransferase system, EIIB component, type 3 LIT28_26340 IPR036095 PTS system IIB component-like superfamily LIT28_26345 IPR030374 Polyamine biosynthesis domain LIT28_26345 IPR030373 Polyamine biosynthesis domain, conserved site LIT28_26345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_26345 IPR001045 Spermidine/spermine synthases LIT28_26350 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic LIT28_26350 IPR017716 S-adenosylmethionine decarboxylase proenzyme LIT28_26350 IPR016067 S-adenosylmethionine decarboxylase, core LIT28_26355 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily LIT28_26355 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit LIT28_26360 IPR003352 Phosphotransferase system, EIIC LIT28_26360 IPR004501 Phosphotransferase system, EIIC component, type 3 LIT28_26360 IPR004796 Phosphotransferase system, cellobiose-type IIC component LIT28_26365 IPR036095 PTS system IIB component-like superfamily LIT28_26365 IPR013012 Phosphotransferase system, EIIB component, type 3 LIT28_26365 IPR003501 Phosphotransferase system, EIIB component, type 2/3 LIT28_26370 IPR033380 Glutamate-aspartate symport protein GltP/GltT LIT28_26370 IPR036458 Sodium:dicarboxylate symporter superfamily LIT28_26370 IPR018107 Sodium:dicarboxylate symporter, conserved site LIT28_26370 IPR001991 Sodium:dicarboxylate symporter LIT28_26380 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIT28_26380 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIT28_26380 IPR037523 Vicinal oxygen chelate (VOC) domain LIT28_26385 IPR017500 Phage infection protein, YhgE, N-terminal LIT28_26385 IPR023908 xxxLxxG heptad repeat LIT28_26385 IPR017501 Phage infection protein, YhgE, C-terminal LIT28_26390 IPR005119 LysR, substrate-binding LIT28_26390 IPR000847 Transcription regulator HTH, LysR LIT28_26390 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_26390 IPR036390 Winged helix DNA-binding domain superfamily LIT28_26395 IPR008928 Six-hairpin glycosidase superfamily LIT28_26395 IPR012341 Six-hairpin glycosidase-like superfamily LIT28_26405 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LIT28_26410 IPR003317 Cytochrome ubiquinol oxidase subunit 2 LIT28_26415 IPR000802 Arsenical pump membrane protein, ArsB LIT28_26420 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B LIT28_26420 IPR037509 Phosphomethylpyrimidine synthase LIT28_26420 IPR025747 ThiC-associated domain LIT28_26420 IPR038521 ThiC/Bza superfamily LIT28_26425 IPR003804 L-lactate permease LIT28_26435 IPR019250 Protein of unknown function DUF2227, metal-binding LIT28_26445 IPR000917 Sulfatase, N-terminal LIT28_26445 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIT28_26445 IPR012160 Lipoteichoic acid synthase-like LIT28_26450 IPR025948 HTH-like domain LIT28_26450 IPR038965 Transposase InsF-like LIT28_26450 IPR001584 Integrase, catalytic core LIT28_26450 IPR012337 Ribonuclease H-like superfamily LIT28_26450 IPR036397 Ribonuclease H superfamily LIT28_26460 IPR018300 Aminotransferase, class IV, conserved site LIT28_26460 IPR036038 Aminotransferase-like, PLP-dependent enzymes LIT28_26460 IPR005784 D-amino acid aminotransferase LIT28_26460 IPR001544 Aminotransferase class IV LIT28_26465 IPR018392 LysM domain LIT28_26465 IPR036779 LysM domain superfamily LIT28_26465 IPR000064 Endopeptidase, NLPC/P60 domain LIT28_26465 IPR038765 Papain-like cysteine peptidase superfamily LIT28_26470 IPR002668 Concentrative nucleoside transporter N-terminal domain LIT28_26470 IPR011657 Concentrative nucleoside transporter C-terminal domain LIT28_26470 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial LIT28_26470 IPR008276 Concentrative nucleoside transporter LIT28_26480 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_26485 IPR000060 BCCT transporter family LIT28_26485 IPR018093 BCCT transporter, conserved site LIT28_26490 IPR010611 3D domain LIT28_26490 IPR018392 LysM domain LIT28_26490 IPR036779 LysM domain superfamily LIT28_26490 IPR036908 RlpA-like domain superfamily LIT28_26515 IPR007527 Zinc finger, SWIM-type LIT28_26520 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_26520 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26520 IPR001650 Helicase, C-terminal LIT28_26520 IPR022138 Helicase SWF/SNF-related LIT28_26520 IPR038718 SNF2-like, N-terminal domain superfamily LIT28_26520 IPR000330 SNF2-related, N-terminal domain LIT28_26550 IPR007627 RNA polymerase sigma-70 region 2 LIT28_26550 IPR000943 RNA polymerase sigma-70 LIT28_26550 IPR014209 RNA polymerase sigma-K type LIT28_26550 IPR014284 RNA polymerase sigma-70 like domain LIT28_26550 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_26550 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_26550 IPR013325 RNA polymerase sigma factor, region 2 LIT28_26550 IPR007630 RNA polymerase sigma-70 region 4 LIT28_26555 IPR006977 Yip1 domain LIT28_26560 IPR025857 MacB-like periplasmic core domain LIT28_26560 IPR005085 Carbohydrate binding module family 25 LIT28_26560 IPR003838 ABC transporter permease protein domain LIT28_26565 IPR017871 ABC transporter, conserved site LIT28_26565 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26565 IPR003593 AAA+ ATPase domain LIT28_26565 IPR003439 ABC transporter-like LIT28_26575 IPR020846 Major facilitator superfamily domain LIT28_26575 IPR011701 Major facilitator superfamily LIT28_26575 IPR036259 MFS transporter superfamily LIT28_26575 IPR005267 Glycerol-3-phosphate transporter LIT28_26575 IPR021159 Glycerate/sugar phosphate transporter, conserved site LIT28_26575 IPR000849 Sugar phosphate transporter LIT28_26590 IPR000014 PAS domain LIT28_26590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_26590 IPR013767 PAS fold LIT28_26590 IPR035965 PAS domain superfamily LIT28_26590 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_26590 IPR005467 Histidine kinase domain LIT28_26590 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_26590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_26590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_26590 IPR031967 PhoR, single Cache-like domain LIT28_26595 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_26595 IPR011006 CheY-like superfamily LIT28_26595 IPR001789 Signal transduction response regulator, receiver domain LIT28_26595 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_26595 IPR039420 Transcriptional regulatory protein WalR-like LIT28_26595 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_26600 IPR016040 NAD(P)-binding domain LIT28_26600 IPR036291 NAD(P)-binding domain superfamily LIT28_26600 IPR005886 UDP-glucose 4-epimerase LIT28_26605 IPR004474 Cell envelope-related transcriptional attenuator domain LIT28_26605 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU LIT28_26610 IPR029069 HotDog domain superfamily LIT28_26610 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ LIT28_26610 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ LIT28_26620 IPR005835 Nucleotidyl transferase domain LIT28_26620 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_26620 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type LIT28_26630 IPR036397 Ribonuclease H superfamily LIT28_26630 IPR012337 Ribonuclease H-like superfamily LIT28_26630 IPR001584 Integrase, catalytic core LIT28_26630 IPR038965 Transposase InsF-like LIT28_26630 IPR025948 HTH-like domain LIT28_26635 IPR001296 Glycosyl transferase, family 1 LIT28_26635 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LIT28_26635 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA LIT28_26640 IPR007554 CDP-glycerol glycerophosphotransferase LIT28_26640 IPR001173 Glycosyltransferase 2-like LIT28_26640 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_26645 IPR007554 CDP-glycerol glycerophosphotransferase LIT28_26650 IPR003646 SH3-like domain, bacterial-type LIT28_26650 IPR003439 ABC transporter-like LIT28_26650 IPR003593 AAA+ ATPase domain LIT28_26650 IPR015860 ABC transporter, teichoic acids export, TagH LIT28_26650 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26650 IPR017871 ABC transporter, conserved site LIT28_26655 IPR000412 ABC-2 transporter LIT28_26655 IPR013525 ABC-2 type transporter LIT28_26660 IPR007554 CDP-glycerol glycerophosphotransferase LIT28_26665 IPR007554 CDP-glycerol glycerophosphotransferase LIT28_26670 IPR006409 Glycerol-3-phosphate cytidylyltransferase LIT28_26670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_26670 IPR004821 Cytidyltransferase-like domain LIT28_26675 IPR004753 Cell shape determining protein MreB LIT28_26680 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID LIT28_26680 IPR018356 Transcription regulator, HTH DeoR-type, conserved site LIT28_26685 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIT28_26685 IPR002509 NodB homology domain LIT28_26695 IPR011055 Duplicated hybrid motif LIT28_26695 IPR016047 Peptidase M23 LIT28_26705 IPR003593 AAA+ ATPase domain LIT28_26705 IPR003439 ABC transporter-like LIT28_26705 IPR017871 ABC transporter, conserved site LIT28_26705 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26710 IPR001789 Signal transduction response regulator, receiver domain LIT28_26710 IPR007492 LytTR DNA-binding domain LIT28_26710 IPR011006 CheY-like superfamily LIT28_26720 IPR013486 Sporulation stage II protein D, amidase enhancer LytB LIT28_26720 IPR014225 Sporulation stage II, protein D firmicutes LIT28_26720 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal LIT28_26725 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase LIT28_26725 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta LIT28_26725 IPR036968 Enolpyruvate transferase domain superfamily LIT28_26725 IPR001986 Enolpyruvate transferase domain LIT28_26735 IPR009526 Protein of unknown function DUF1146 LIT28_26740 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LIT28_26740 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 LIT28_26745 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LIT28_26745 IPR022997 NADH-quinone oxidoreductase chain 4 LIT28_26745 IPR003918 NADH:ubiquinone oxidoreductase LIT28_26745 IPR010227 NADH-quinone oxidoreductase, chain M/4 LIT28_26750 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal LIT28_26750 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LIT28_26750 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal LIT28_26750 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup LIT28_26750 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 LIT28_26755 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K LIT28_26755 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like LIT28_26760 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 LIT28_26760 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ LIT28_26770 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H LIT28_26770 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site LIT28_26775 IPR029014 [NiFe]-hydrogenase, large subunit LIT28_26775 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H LIT28_26775 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily LIT28_26775 IPR001135 NADH-quinone oxidoreductase, subunit D LIT28_26780 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site LIT28_26780 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit LIT28_26780 IPR010218 NADH dehydrogenase, subunit C LIT28_26780 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily LIT28_26785 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit LIT28_26785 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit LIT28_26790 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily LIT28_26790 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 LIT28_26790 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid LIT28_26795 IPR005330 MHYT domain LIT28_26795 IPR035965 PAS domain superfamily LIT28_26795 IPR029787 Nucleotide cyclase LIT28_26795 IPR000160 GGDEF domain LIT28_26795 IPR035919 EAL domain superfamily LIT28_26795 IPR001633 EAL domain LIT28_26810 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal LIT28_26810 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal LIT28_26810 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain LIT28_26810 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily LIT28_26810 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit LIT28_26815 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26815 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LIT28_26815 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal LIT28_26815 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily LIT28_26815 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LIT28_26815 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LIT28_26815 IPR005722 ATP synthase, F1 complex, beta subunit LIT28_26815 IPR003593 AAA+ ATPase domain LIT28_26820 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily LIT28_26820 IPR000131 ATP synthase, F1 complex, gamma subunit LIT28_26820 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site LIT28_26825 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26825 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LIT28_26825 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily LIT28_26825 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LIT28_26825 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LIT28_26825 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily LIT28_26825 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain LIT28_26825 IPR000793 ATP synthase, alpha subunit, C-terminal LIT28_26825 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LIT28_26825 IPR005294 ATP synthase, F1 complex, alpha subunit LIT28_26830 IPR020781 ATPase, OSCP/delta subunit, conserved site LIT28_26830 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily LIT28_26830 IPR000711 ATPase, OSCP/delta subunit LIT28_26835 IPR005864 ATP synthase, F0 complex, subunit b, bacterial LIT28_26835 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast LIT28_26835 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily LIT28_26840 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast LIT28_26840 IPR000454 ATP synthase, F0 complex, subunit C LIT28_26840 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site LIT28_26840 IPR038662 F1F0 ATP synthase subunit C superfamily LIT28_26840 IPR002379 V-ATPase proteolipid subunit C-like domain LIT28_26840 IPR035921 F/V-ATP synthase subunit C superfamily LIT28_26845 IPR000568 ATP synthase, F0 complex, subunit A LIT28_26845 IPR023011 ATP synthase, F0 complex, subunit A, active site LIT28_26845 IPR035908 ATP synthase, F0 complex, subunit A superfamily LIT28_26850 IPR039072 ATP synthase protein I, Bacilli-type LIT28_26850 IPR005598 ATP synthase protein I LIT28_26865 IPR005765 Uracil phosphoribosyl transferase LIT28_26865 IPR029057 Phosphoribosyltransferase-like LIT28_26865 IPR034332 Uracil phosphoribosyltransferase, bacterial-type LIT28_26865 IPR000836 Phosphoribosyltransferase domain LIT28_26870 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_26870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_26870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_26870 IPR001085 Serine hydroxymethyltransferase LIT28_26870 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site LIT28_26870 IPR039429 Serine hydroxymethyltransferase-like domain LIT28_26875 IPR028345 Aminoglycoside 3-N-acetyltransferase-like LIT28_26875 IPR006340 Protein of unknown function DUF436 LIT28_26880 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family LIT28_26880 IPR004785 Ribose 5-phosphate isomerase B LIT28_26880 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily LIT28_26885 IPR023485 Phosphotyrosine protein phosphatase I LIT28_26885 IPR036196 Phosphotyrosine protein phosphatase I superfamily LIT28_26885 IPR017867 Protein-tyrosine phosphatase, low molecular weight LIT28_26890 IPR011055 Duplicated hybrid motif LIT28_26890 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 LIT28_26895 IPR032808 DoxX family LIT28_26900 IPR012349 FMN-binding split barrel LIT28_26900 IPR002563 Flavin reductase like domain LIT28_26910 IPR022929 Putative manganese efflux pump MntP LIT28_26910 IPR003810 Putative manganese efflux pump LIT28_26915 IPR005145 Putative GTP-binding controlling metal-binding domain LIT28_26915 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily LIT28_26915 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 LIT28_26915 IPR006070 YrdC-like domain LIT28_26915 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LIT28_26925 IPR014202 Sporulation stage II, protein R LIT28_26930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_26930 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific LIT28_26930 IPR040758 Release factor glutamine methyltransferase, N-terminal domain LIT28_26930 IPR004556 Methyltransferase HemK-like LIT28_26930 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LIT28_26930 IPR025714 Methyltransferase domain LIT28_26935 IPR005139 Peptide chain release factor LIT28_26935 IPR000352 Peptide chain release factor class I LIT28_26935 IPR004373 Peptide chain release factor 1 LIT28_26940 IPR020633 Thymidine kinase, conserved site LIT28_26940 IPR001267 Thymidine kinase LIT28_26940 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26945 IPR034704 L28p-like LIT28_26945 IPR002150 Ribosomal protein L31 LIT28_26945 IPR027493 Ribosomal protein L31 type B LIT28_26945 IPR042105 Ribosomal protein L31 superfamily LIT28_26950 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LIT28_26950 IPR004665 Transcription termination factor Rho LIT28_26950 IPR011113 Rho termination factor, RNA-binding domain LIT28_26950 IPR003593 AAA+ ATPase domain LIT28_26950 IPR036269 Rho termination factor, N-terminal domain superfamily LIT28_26950 IPR011129 Cold shock domain LIT28_26950 IPR012340 Nucleic acid-binding, OB-fold LIT28_26950 IPR011112 Rho termination factor, N-terminal LIT28_26950 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26950 IPR041703 Transcription termination factor Rho, ATP binding domain LIT28_26955 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase LIT28_26960 IPR036968 Enolpyruvate transferase domain superfamily LIT28_26960 IPR001986 Enolpyruvate transferase domain LIT28_26960 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta LIT28_26960 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase LIT28_26965 IPR000771 Fructose-bisphosphate aldolase, class-II LIT28_26965 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 LIT28_26965 IPR013785 Aldolase-type TIM barrel LIT28_26970 IPR011006 CheY-like superfamily LIT28_26970 IPR001789 Signal transduction response regulator, receiver domain LIT28_26975 IPR019676 Domain of unknown function (DUF2529) LIT28_26980 IPR029062 Class I glutamine amidotransferase-like LIT28_26980 IPR004468 CTP synthase LIT28_26980 IPR017456 CTP synthase, N-terminal LIT28_26980 IPR017926 Glutamine amidotransferase LIT28_26980 IPR033828 CTP synthase GATase domain LIT28_26980 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_26985 IPR007759 HB1/Asxl, restriction endonuclease HTH domain LIT28_26985 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily LIT28_26985 IPR029757 DNA-directed RNA polymerase subunit delta LIT28_26995 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIT28_26995 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIT28_26995 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIT28_26995 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIT28_26995 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIT28_26995 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIT28_26995 IPR006089 Acyl-CoA dehydrogenase, conserved site LIT28_27000 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIT28_27000 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIT28_27000 IPR006089 Acyl-CoA dehydrogenase, conserved site LIT28_27000 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIT28_27000 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIT28_27000 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIT28_27000 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIT28_27005 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LIT28_27005 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_27005 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_27005 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site LIT28_27005 IPR022694 3-hydroxyacyl-CoA dehydrogenase LIT28_27005 IPR036291 NAD(P)-binding domain superfamily LIT28_27005 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LIT28_27015 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIT28_27015 IPR004017 Cysteine-rich domain LIT28_27015 IPR009051 Alpha-helical ferredoxin LIT28_27015 IPR036197 NarG-like superfamily LIT28_27015 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIT28_27020 IPR025202 Phospholipase D-like domain LIT28_27020 IPR022924 Cardiolipin synthase LIT28_27020 IPR001736 Phospholipase D/Transphosphatidylase LIT28_27025 IPR036237 Xylose isomerase-like superfamily LIT28_27025 IPR023520 UV-endonuclease UvdE, bacterial LIT28_27025 IPR004601 UV-endonuclease UvdE LIT28_27030 IPR001633 EAL domain LIT28_27030 IPR000160 GGDEF domain LIT28_27030 IPR005330 MHYT domain LIT28_27030 IPR029787 Nucleotide cyclase LIT28_27030 IPR035965 PAS domain superfamily LIT28_27030 IPR035919 EAL domain superfamily LIT28_27050 IPR000792 Transcription regulator LuxR, C-terminal LIT28_27050 IPR011006 CheY-like superfamily LIT28_27050 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_27050 IPR001789 Signal transduction response regulator, receiver domain LIT28_27055 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_27055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_27055 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LIT28_27060 IPR000412 ABC-2 transporter LIT28_27065 IPR003593 AAA+ ATPase domain LIT28_27065 IPR003439 ABC transporter-like LIT28_27065 IPR017871 ABC transporter, conserved site LIT28_27065 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27070 IPR000994 Peptidase M24 LIT28_27070 IPR001714 Peptidase M24, methionine aminopeptidase LIT28_27070 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 LIT28_27070 IPR036005 Creatinase/aminopeptidase-like LIT28_27080 IPR003137 PA domain LIT28_27080 IPR007484 Peptidase M28 LIT28_27100 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_27100 IPR013325 RNA polymerase sigma factor, region 2 LIT28_27100 IPR039425 RNA polymerase sigma-70 like LIT28_27100 IPR014284 RNA polymerase sigma-70 like domain LIT28_27100 IPR014294 RNA polymerase sigma-W, bacillaceae LIT28_27100 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site LIT28_27100 IPR007627 RNA polymerase sigma-70 region 2 LIT28_27100 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 LIT28_27100 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_27105 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIT28_27105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_27105 IPR008909 DALR anticodon binding LIT28_27105 IPR035684 Arginyl-tRNA synthetase, catalytic core domain LIT28_27105 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily LIT28_27105 IPR005148 Arginyl tRNA synthetase N-terminal domain LIT28_27105 IPR001278 Arginine-tRNA ligase LIT28_27105 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIT28_27110 IPR012674 Calycin LIT28_27110 IPR015231 Protein of unknown function DUF1934 LIT28_27115 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily LIT28_27115 IPR029062 Class I glutamine amidotransferase-like LIT28_27115 IPR040921 LD-carboxypeptidase, C-terminal LIT28_27115 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal LIT28_27115 IPR040449 LD-carboxypeptidase, N-terminal LIT28_27115 IPR003507 Peptidase family S66 LIT28_27130 IPR006035 Ureohydrolase LIT28_27130 IPR020855 Ureohydrolase, manganese-binding site LIT28_27130 IPR023696 Ureohydrolase domain superfamily LIT28_27130 IPR005925 Agmatinase-related LIT28_27135 IPR037163 Spermidine synthase, tetramerisation domain superfamily LIT28_27135 IPR001045 Spermidine/spermine synthases LIT28_27135 IPR030374 Polyamine biosynthesis domain LIT28_27135 IPR030373 Polyamine biosynthesis domain, conserved site LIT28_27135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_27135 IPR035246 Spermidine synthase, tetramerisation domain LIT28_27140 IPR036259 MFS transporter superfamily LIT28_27140 IPR011701 Major facilitator superfamily LIT28_27140 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIT28_27140 IPR020846 Major facilitator superfamily domain LIT28_27145 IPR037392 YfmP, Helix-Turn-Helix DNA binding domain LIT28_27145 IPR000551 MerR-type HTH domain LIT28_27145 IPR009061 Putative DNA-binding domain superfamily LIT28_27150 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily LIT28_27150 IPR030395 Glycerophosphodiester phosphodiesterase domain LIT28_27155 IPR023346 Lysozyme-like domain superfamily LIT28_27155 IPR001264 Glycosyl transferase, family 51 LIT28_27155 IPR012338 Beta-lactamase/transpeptidase-like LIT28_27155 IPR036950 Penicillin binding protein transglycosylase domain LIT28_27155 IPR001460 Penicillin-binding protein, transpeptidase LIT28_27160 IPR014852 Uncharacterised protein YwhD LIT28_27165 IPR008915 Peptidase M50 LIT28_27170 IPR014347 Tautomerase/MIF superfamily LIT28_27170 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type LIT28_27170 IPR004370 4-oxalocrotonate tautomerase LIT28_27175 IPR003607 HD/PDEase domain LIT28_27175 IPR006674 HD domain LIT28_27180 IPR002491 ABC transporter periplasmic binding domain LIT28_27185 IPR003439 ABC transporter-like LIT28_27185 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27185 IPR017871 ABC transporter, conserved site LIT28_27185 IPR003593 AAA+ ATPase domain LIT28_27190 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_27190 IPR037294 ABC transporter, BtuC-like LIT28_27195 IPR000522 ABC transporter, permease protein, BtuC-like LIT28_27195 IPR037294 ABC transporter, BtuC-like LIT28_27200 IPR020880 Protein of unknown function UPF0741 LIT28_27200 IPR009910 Protein of unknown function DUF1450 LIT28_27205 IPR017877 Myb-like domain LIT28_27205 IPR014243 Transcription factor, RsfA LIT28_27210 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LIT28_27210 IPR024897 Octanoyltransferase LipL LIT28_27215 IPR004614 Phosphate acetyltransferase LIT28_27215 IPR042113 Phosphate acetyltransferase, domain 1 LIT28_27215 IPR042112 Phosphate acetyltransferase, domain 2 LIT28_27215 IPR012147 Phosphate acetyl/butyryltransferase LIT28_27215 IPR002505 Phosphate acetyl/butaryl transferase LIT28_27220 IPR011008 Dimeric alpha-beta barrel LIT28_27220 IPR031332 Putative heme-dependent peroxidase, UPF0447 family LIT28_27220 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase LIT28_27225 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LIT28_27225 IPR012338 Beta-lactamase/transpeptidase-like LIT28_27225 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIT28_27225 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIT28_27225 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LIT28_27225 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIT28_27230 IPR042047 Cell wall hydrolase SleB, domain 1 LIT28_27230 IPR011105 Cell wall hydrolase, SleB LIT28_27235 IPR014099 Spore coat protein GerQ LIT28_27240 IPR006696 Protein of unknown function DUF423 LIT28_27250 IPR036291 NAD(P)-binding domain superfamily LIT28_27250 IPR003148 Regulator of K+ conductance, N-terminal LIT28_27250 IPR013099 Potassium channel domain LIT28_27255 IPR006042 Xanthine/uracil permease LIT28_27255 IPR006043 Xanthine/uracil/vitamin C permease LIT28_27260 IPR006379 HAD-superfamily hydrolase, subfamily IIB LIT28_27260 IPR000150 Cof family LIT28_27260 IPR036412 HAD-like superfamily LIT28_27260 IPR023214 HAD superfamily LIT28_27265 IPR023845 Domain of unknown function DUF3817, transmembrane LIT28_27270 IPR002043 Uracil-DNA glycosylase family 1 LIT28_27270 IPR018085 Uracil-DNA glycosylase, active site LIT28_27270 IPR005122 Uracil-DNA glycosylase-like LIT28_27270 IPR036895 Uracil-DNA glycosylase-like domain superfamily LIT28_27275 IPR032688 ABC-2 family transporter protein LIT28_27280 IPR003593 AAA+ ATPase domain LIT28_27280 IPR003439 ABC transporter-like LIT28_27280 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27280 IPR017871 ABC transporter, conserved site LIT28_27285 IPR036514 SGNH hydrolase superfamily LIT28_27285 IPR013830 SGNH hydrolase-type esterase domain LIT28_27290 IPR001761 Periplasmic binding protein/LacI sugar binding domain LIT28_27290 IPR000843 LacI-type HTH domain LIT28_27290 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_27290 IPR028082 Periplasmic binding protein-like I LIT28_27300 IPR016204 Homoserine dehydrogenase LIT28_27300 IPR036291 NAD(P)-binding domain superfamily LIT28_27300 IPR002912 ACT domain LIT28_27300 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding LIT28_27300 IPR001342 Homoserine dehydrogenase, catalytic LIT28_27300 IPR019811 Homoserine dehydrogenase, conserved site LIT28_27305 IPR029062 Class I glutamine amidotransferase-like LIT28_27305 IPR005697 Homoserine O-succinyltransferase MetA LIT28_27305 IPR033752 MetA family LIT28_27310 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LIT28_27310 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase LIT28_27310 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_27310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_27310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_27320 IPR041492 Haloacid dehalogenase-like hydrolase LIT28_27320 IPR006439 HAD hydrolase, subfamily IA LIT28_27320 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB LIT28_27320 IPR023214 HAD superfamily LIT28_27320 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIT28_27320 IPR036412 HAD-like superfamily LIT28_27325 IPR012318 Crp-type HTH domain LIT28_27325 IPR000595 Cyclic nucleotide-binding domain LIT28_27325 IPR018490 Cyclic nucleotide-binding-like LIT28_27330 IPR003680 Flavodoxin-like fold LIT28_27330 IPR029039 Flavoprotein-like superfamily LIT28_27330 IPR023048 NADH-azoreductase, FMN-dependent LIT28_27335 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_27335 IPR001789 Signal transduction response regulator, receiver domain LIT28_27335 IPR000792 Transcription regulator LuxR, C-terminal LIT28_27335 IPR011006 CheY-like superfamily LIT28_27340 IPR003018 GAF domain LIT28_27340 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LIT28_27340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_27340 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_27340 IPR029016 GAF-like domain superfamily LIT28_27345 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase LIT28_27345 IPR029056 Ribokinase-like LIT28_27345 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase LIT28_27350 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LIT28_27350 IPR029787 Nucleotide cyclase LIT28_27350 IPR000160 GGDEF domain LIT28_27355 IPR007423 Selenoprotein, putative LIT28_27360 IPR003706 CstA, N-terminal domain LIT28_27360 IPR025299 CstA, C-terminal domain LIT28_27365 IPR011006 CheY-like superfamily LIT28_27365 IPR007492 LytTR DNA-binding domain LIT28_27365 IPR001789 Signal transduction response regulator, receiver domain LIT28_27370 IPR005829 Sugar transporter, conserved site LIT28_27370 IPR036259 MFS transporter superfamily LIT28_27370 IPR011701 Major facilitator superfamily LIT28_27370 IPR020846 Major facilitator superfamily domain LIT28_27375 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase LIT28_27375 IPR004629 Glycosyl transferase WecB/TagA/CpsF LIT28_27390 IPR005115 Uncharacterised domain UPF0126 LIT28_27395 IPR009050 Globin-like superfamily LIT28_27395 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_27395 IPR039379 Protoglobin, globin sensor domain LIT28_27395 IPR012292 Globin/Protoglobin LIT28_27405 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain LIT28_27405 IPR006683 Thioesterase domain LIT28_27405 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase LIT28_27405 IPR029069 HotDog domain superfamily LIT28_27415 IPR001173 Glycosyltransferase 2-like LIT28_27415 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_27420 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27420 IPR017871 ABC transporter, conserved site LIT28_27420 IPR003593 AAA+ ATPase domain LIT28_27420 IPR032781 ABC-transporter extension domain LIT28_27420 IPR003439 ABC transporter-like LIT28_27435 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_27435 IPR001173 Glycosyltransferase 2-like LIT28_27440 IPR001647 DNA-binding HTH domain, TetR-type LIT28_27440 IPR009057 Homeobox-like domain superfamily LIT28_27440 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_27445 IPR001036 Acriflavin resistance protein LIT28_27445 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LIT28_27450 IPR028427 Peptide methionine sulfoxide reductase LIT28_27450 IPR002579 Peptide methionine sulphoxide reductase MrsB LIT28_27450 IPR011057 Mss4-like superfamily LIT28_27460 IPR002549 Transmembrane protein TqsA-like LIT28_27465 IPR024891 Antiholin-like protein LrgB LIT28_27465 IPR007300 CidB/LrgB family LIT28_27470 IPR023736 Antiholin-like protein LrgA LIT28_27470 IPR005538 LrgA/CidA family LIT28_27475 IPR001789 Signal transduction response regulator, receiver domain LIT28_27475 IPR007492 LytTR DNA-binding domain LIT28_27475 IPR011006 CheY-like superfamily LIT28_27480 IPR029016 GAF-like domain superfamily LIT28_27480 IPR003018 GAF domain LIT28_27480 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_27480 IPR005467 Histidine kinase domain LIT28_27480 IPR010559 Signal transduction histidine kinase, internal region LIT28_27480 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LIT28_27480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_27485 IPR011701 Major facilitator superfamily LIT28_27485 IPR020846 Major facilitator superfamily domain LIT28_27485 IPR036259 MFS transporter superfamily LIT28_27485 IPR005829 Sugar transporter, conserved site LIT28_27490 IPR000060 BCCT transporter family LIT28_27495 IPR036119 Nitric oxide synthase, N-terminal domain superfamily LIT28_27495 IPR004030 Nitric oxide synthase, N-terminal LIT28_27495 IPR017142 Nitric oxide synthase, oxygenase subunit LIT28_27500 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily LIT28_27500 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily LIT28_27500 IPR019831 Manganese/iron superoxide dismutase, N-terminal LIT28_27500 IPR019832 Manganese/iron superoxide dismutase, C-terminal LIT28_27500 IPR019833 Manganese/iron superoxide dismutase, binding site LIT28_27500 IPR001189 Manganese/iron superoxide dismutase LIT28_27510 IPR038523 AmiS/UreI transporter superfamily LIT28_27510 IPR003211 AmiS/UreI transporter LIT28_27520 IPR005886 UDP-glucose 4-epimerase LIT28_27520 IPR016040 NAD(P)-binding domain LIT28_27520 IPR036291 NAD(P)-binding domain superfamily LIT28_27525 IPR004254 AdipoR/Haemolysin-III-related LIT28_27525 IPR005744 Hly-III LIT28_27535 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LIT28_27535 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27535 IPR028619 ATP-dependent RNA helicase DbpA LIT28_27535 IPR014014 RNA helicase, DEAD-box type, Q motif LIT28_27535 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain LIT28_27535 IPR011545 DEAD/DEAH box helicase domain LIT28_27535 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LIT28_27535 IPR001650 Helicase, C-terminal LIT28_27535 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIT28_27545 IPR001093 IMP dehydrogenase/GMP reductase LIT28_27545 IPR015875 IMP dehydrogenase / GMP reductase, conserved site LIT28_27545 IPR005994 Guanosine monophosphate reductase, type2 LIT28_27545 IPR013785 Aldolase-type TIM barrel LIT28_27545 IPR001295 Dihydroorotate dehydrogenase, conserved site LIT28_27550 IPR042088 Oligoendopeptidase F, C-terminal domain LIT28_27550 IPR001567 Peptidase M3A/M3B catalytic domain LIT28_27550 IPR004438 Peptidase M3B, oligoendopeptidase F LIT28_27550 IPR013647 Oligopeptidase F, N-terminal domain LIT28_27560 IPR003742 RNA methyltransferase RlmH LIT28_27560 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIT28_27560 IPR029028 Alpha/beta knot methyltransferases LIT28_27570 IPR001940 Peptidase S1C LIT28_27570 IPR009003 Peptidase S1, PA clan LIT28_27570 IPR036034 PDZ superfamily LIT28_27570 IPR001478 PDZ domain LIT28_27575 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_27575 IPR001279 Metallo-beta-lactamase LIT28_27580 IPR018604 Regulatory protein YycH-like LIT28_27580 IPR042274 Regulatory protein YycH/YycI , domain 2 LIT28_27585 IPR009996 Regulatory protein YycH LIT28_27585 IPR042274 Regulatory protein YycH/YycI , domain 2 LIT28_27590 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_27590 IPR000014 PAS domain LIT28_27590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_27590 IPR035965 PAS domain superfamily LIT28_27590 IPR003660 HAMP domain LIT28_27590 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_27590 IPR000700 PAS-associated, C-terminal LIT28_27590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_27590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_27590 IPR005467 Histidine kinase domain LIT28_27590 IPR001610 PAC motif LIT28_27595 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_27595 IPR039420 Transcriptional regulatory protein WalR-like LIT28_27595 IPR001789 Signal transduction response regulator, receiver domain LIT28_27595 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_27595 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_27595 IPR011006 CheY-like superfamily LIT28_27620 IPR042109 Adenylosuccinate synthetase, domain 1 LIT28_27620 IPR001114 Adenylosuccinate synthetase LIT28_27620 IPR033128 Adenylosuccinate synthase, active site LIT28_27620 IPR042110 Adenylosuccinate synthetase, domain 2 LIT28_27620 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27620 IPR018220 Adenylosuccinate synthase, GTP-binding site LIT28_27620 IPR042111 Adenylosuccinate synthetase, domain 3 LIT28_27625 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27625 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LIT28_27625 IPR007693 DNA helicase, DnaB-like, N-terminal LIT28_27625 IPR007694 DNA helicase, DnaB-like, C-terminal LIT28_27625 IPR007692 DNA helicase, DnaB type LIT28_27625 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily LIT28_27625 IPR003593 AAA+ ATPase domain LIT28_27630 IPR036935 Ribosomal protein L9, N-terminal domain superfamily LIT28_27630 IPR000244 Ribosomal protein L9 LIT28_27630 IPR020070 Ribosomal protein L9, N-terminal LIT28_27630 IPR036791 Ribosomal protein L9, C-terminal domain superfamily LIT28_27630 IPR020069 Ribosomal protein L9, C-terminal LIT28_27630 IPR020594 Ribosomal protein L9, bacteria/chloroplast LIT28_27630 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LIT28_27635 IPR003156 DHHA1 domain LIT28_27635 IPR038763 DHH phosphoesterase superfamily LIT28_27635 IPR001667 DDH domain LIT28_27635 IPR000160 GGDEF domain LIT28_27635 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA LIT28_27640 IPR018710 Protein of unknown function DUF2232 LIT28_27645 IPR001648 Ribosomal protein S18 LIT28_27645 IPR018275 Ribosomal protein S18, conserved site LIT28_27645 IPR036870 Ribosomal protein S18 superfamily LIT28_27650 IPR012340 Nucleic acid-binding, OB-fold LIT28_27650 IPR000424 Primosome PriB/single-strand DNA-binding LIT28_27650 IPR011344 Single-stranded DNA-binding protein LIT28_27655 IPR020814 Ribosomal protein S6, plastid/chloroplast LIT28_27655 IPR000529 Ribosomal protein S6 LIT28_27655 IPR020815 Ribosomal protein S6, conserved site LIT28_27655 IPR035980 Ribosomal protein S6 superfamily LIT28_27655 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LIT28_27660 IPR013029 YchF, C-terminal domain LIT28_27660 IPR012676 TGS-like LIT28_27660 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 LIT28_27660 IPR012675 Beta-grasp domain superfamily LIT28_27660 IPR004095 TGS LIT28_27660 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27660 IPR023192 TGS-like domain superfamily LIT28_27660 IPR006073 GTP binding domain LIT28_27660 IPR041706 YchF, N-terminal LIT28_27660 IPR031167 OBG-type guanine nucleotide-binding (G) domain LIT28_27665 IPR009296 Protein of unknown function DUF951 LIT28_27670 IPR006685 Mechanosensitive ion channel MscS LIT28_27670 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LIT28_27670 IPR023408 Mechanosensitive ion channel MscS domain superfamily LIT28_27670 IPR010920 LSM domain superfamily LIT28_27670 IPR011066 Mechanosensitive ion channel MscS, C-terminal LIT28_27675 IPR009665 Protein of unknown function DUF1256 LIT28_27675 IPR023430 Peptidase HybD-like domain superfamily LIT28_27680 IPR041468 ParB/Spo0J, HTH domain LIT28_27680 IPR036086 ParB/Sulfiredoxin superfamily LIT28_27680 IPR003115 ParB/Sulfiredoxin LIT28_27680 IPR004437 ParB/RepB/Spo0J partition protein LIT28_27685 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27685 IPR025669 AAA domain LIT28_27690 IPR036086 ParB/Sulfiredoxin superfamily LIT28_27690 IPR003115 ParB/Sulfiredoxin LIT28_27690 IPR004437 ParB/RepB/Spo0J partition protein LIT28_27690 IPR023705 Nucleoid occlusion protein LIT28_27690 IPR041468 ParB/Spo0J, HTH domain LIT28_27695 IPR003682 rRNA small subunit methyltransferase G LIT28_27695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIT28_27700 IPR020595 MnmG-related, conserved site LIT28_27700 IPR026904 GidA associated domain 3 LIT28_27700 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_27700 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG LIT28_27700 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related LIT28_27705 IPR005225 Small GTP-binding protein domain LIT28_27705 IPR018948 GTP-binding protein TrmE, N-terminal LIT28_27705 IPR006073 GTP binding domain LIT28_27705 IPR004520 tRNA modification GTPase MnmE LIT28_27705 IPR027368 tRNA modification GTPase MnmE domain 2 LIT28_27705 IPR025867 MnmE, helical domain LIT28_27705 IPR031168 TrmE-type guanine nucleotide-binding domain LIT28_27705 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 LIT28_27705 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_27710 IPR015946 K homology domain-like, alpha/beta LIT28_27710 IPR034079 Jag, R3H domain LIT28_27710 IPR004087 K Homology domain LIT28_27710 IPR038247 Jag, N-terminal domain superfamily LIT28_27710 IPR032782 Jag, N-terminal LIT28_27710 IPR039247 Jag protein LIT28_27710 IPR001374 R3H domain LIT28_27710 IPR036867 R3H domain superfamily LIT28_27710 IPR038008 Jag, KH domain LIT28_27715 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LIT28_27715 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 LIT28_27715 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes LIT28_27720 IPR020539 Ribonuclease P, conserved site LIT28_27720 IPR000100 Ribonuclease P LIT28_27720 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIT28_27720 IPR020568 Ribosomal protein S5 domain 2-type fold LIT28_27725 IPR020939 Ribosomal protein L34, conserved site LIT28_27725 IPR000271 Ribosomal protein L34 LIT28_27740 IPR021027 Transposase, putative, helix-turn-helix domain LIT28_27740 IPR010095 Transposase IS605, OrfB, C-terminal LIT28_27740 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIT28_27800 IPR004465 Ribonucleotide reductase Class Ib, NrdI LIT28_27800 IPR029039 Flavoprotein-like superfamily LIT28_27800 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial LIT28_27850 IPR012338 Beta-lactamase/transpeptidase-like LIT28_27850 IPR001466 Beta-lactamase-related LIT28_27860 IPR012337 Ribonuclease H-like superfamily LIT28_27860 IPR002559 Transposase, IS4-like LIT28_27865 IPR020816 Histone-like DNA-binding protein, conserved site LIT28_27865 IPR000119 Histone-like DNA-binding protein LIT28_27865 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LIT28_27880 IPR009061 Putative DNA-binding domain superfamily LIT28_27880 IPR000551 MerR-type HTH domain LIT28_27880 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain LIT28_27880 IPR012925 TipAS antibiotic-recognition domain LIT28_27890 IPR002559 Transposase, IS4-like LIT28_27890 IPR012337 Ribonuclease H-like superfamily LIT28_27895 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIT28_27895 IPR009057 Homeobox-like domain superfamily LIT28_27895 IPR001647 DNA-binding HTH domain, TetR-type LIT28_27900 IPR000537 UbiA prenyltransferase family LIT28_27900 IPR030470 UbiA prenyltransferase conserved site LIT28_27900 IPR006369 Protohaem IX farnesyltransferase LIT28_27905 IPR012338 Beta-lactamase/transpeptidase-like LIT28_27905 IPR001466 Beta-lactamase-related LIT28_27965 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LIT28_27965 IPR002611 IstB-like ATP-binding protein LIT28_27965 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_28000 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase LIT28_28000 IPR033704 dUTPase, trimeric LIT28_28000 IPR036157 dUTPase-like superfamily LIT28_28000 IPR029054 dUTPase-like LIT28_28035 IPR011856 tRNA endonuclease-like domain superfamily LIT28_28035 IPR004612 Holliday junction resolvase RecU LIT28_28035 IPR011335 Restriction endonuclease type II-like LIT28_28105 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LIT28_28105 IPR006120 Resolvase, HTH domain LIT28_28105 IPR006119 Resolvase, N-terminal catalytic domain LIT28_28105 IPR006118 Recombinase, conserved site LIT28_28120 IPR016032 Signal transduction response regulator, C-terminal effector LIT28_28120 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_28120 IPR011006 CheY-like superfamily LIT28_28120 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_28120 IPR001789 Signal transduction response regulator, receiver domain LIT28_28120 IPR039420 Transcriptional regulatory protein WalR-like LIT28_28125 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_28125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_28125 IPR005467 Histidine kinase domain LIT28_28125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_28125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_28125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_28130 IPR003593 AAA+ ATPase domain LIT28_28130 IPR017871 ABC transporter, conserved site LIT28_28130 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_28130 IPR003439 ABC transporter-like LIT28_28150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_28150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_28150 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_28150 IPR004839 Aminotransferase, class I/classII LIT28_28150 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LIT28_28150 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase LIT28_28160 IPR029009 Allosteric substrate binding domain superfamily LIT28_28160 IPR005131 Serine dehydratase beta chain LIT28_28160 IPR002912 ACT domain LIT28_28160 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit LIT28_28165 IPR010998 Integrase/recombinase, N-terminal LIT28_28165 IPR002104 Integrase, catalytic domain LIT28_28165 IPR013762 Integrase-like, catalytic domain superfamily LIT28_28165 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_28165 IPR004107 Integrase, SAM-like, N-terminal LIT28_28170 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_28170 IPR013762 Integrase-like, catalytic domain superfamily LIT28_28170 IPR002104 Integrase, catalytic domain LIT28_28170 IPR010998 Integrase/recombinase, N-terminal LIT28_28170 IPR011932 Tyrosine recombinase XerD LIT28_28170 IPR023009 Tyrosine recombinase XerC/XerD LIT28_28170 IPR004107 Integrase, SAM-like, N-terminal LIT28_28190 IPR008844 Spore germination GerAC LIT28_28190 IPR038501 Spore germination GerAC superfamily LIT28_28205 IPR012337 Ribonuclease H-like superfamily LIT28_28205 IPR002559 Transposase, IS4-like LIT28_28210 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_28210 IPR005119 LysR, substrate-binding LIT28_28210 IPR000847 Transcription regulator HTH, LysR LIT28_28210 IPR036390 Winged helix DNA-binding domain superfamily LIT28_28215 IPR036259 MFS transporter superfamily LIT28_28215 IPR020846 Major facilitator superfamily domain LIT28_28215 IPR011701 Major facilitator superfamily LIT28_28230 IPR001647 DNA-binding HTH domain, TetR-type LIT28_28230 IPR009057 Homeobox-like domain superfamily LIT28_28230 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIT28_28235 IPR011701 Major facilitator superfamily LIT28_28235 IPR020846 Major facilitator superfamily domain LIT28_28235 IPR036259 MFS transporter superfamily LIT28_28240 IPR012337 Ribonuclease H-like superfamily LIT28_28240 IPR002559 Transposase, IS4-like LIT28_28255 IPR002765 Uncharacterised protein family UPF0145 LIT28_28255 IPR035439 UPF0145 domain superfamily LIT28_28275 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_28275 IPR013762 Integrase-like, catalytic domain superfamily LIT28_28275 IPR002104 Integrase, catalytic domain LIT28_28285 IPR012337 Ribonuclease H-like superfamily LIT28_28285 IPR002559 Transposase, IS4-like LIT28_28295 IPR012337 Ribonuclease H-like superfamily LIT28_28295 IPR002559 Transposase, IS4-like LIT28_28305 IPR013094 Alpha/beta hydrolase fold-3 LIT28_28305 IPR029058 Alpha/Beta hydrolase fold LIT28_28310 IPR019834 Glycoside hydrolase, family 8, conserved site LIT28_28310 IPR012341 Six-hairpin glycosidase-like superfamily LIT28_28310 IPR008928 Six-hairpin glycosidase superfamily LIT28_28310 IPR002037 Glycoside hydrolase, family 8 LIT28_28325 IPR001119 S-layer homology domain LIT28_28330 IPR020846 Major facilitator superfamily domain LIT28_28330 IPR011701 Major facilitator superfamily LIT28_28330 IPR036259 MFS transporter superfamily LIT28_28335 IPR023404 Radical SAM, alpha/beta horseshoe LIT28_28335 IPR038135 Methylthiotransferase, N-terminal domain superfamily LIT28_28335 IPR013848 Methylthiotransferase, N-terminal LIT28_28335 IPR020612 Methylthiotransferase, conserved site LIT28_28335 IPR005839 Methylthiotransferase LIT28_28335 IPR006638 Elp3/MiaB/NifB LIT28_28335 IPR002792 TRAM domain LIT28_28335 IPR007197 Radical SAM LIT28_28335 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB LIT28_28355 IPR025502 TldD LIT28_28355 IPR002510 Metalloprotease TldD/PmbA LIT28_28355 IPR035068 Metalloprotease TldD/PmbA, N-terminal LIT28_28355 IPR036059 Metalloprotease TldD/PmbA superfamily LIT28_28365 IPR008007 Peptidase M42 LIT28_28365 IPR023367 Peptidase M42, domain 2 LIT28_28385 IPR038300 SASP, alpha/beta-type superfamily LIT28_28385 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_28385 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_28395 IPR001789 Signal transduction response regulator, receiver domain LIT28_28395 IPR001867 OmpR/PhoB-type DNA-binding domain LIT28_28395 IPR039420 Transcriptional regulatory protein WalR-like LIT28_28395 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_28395 IPR011006 CheY-like superfamily LIT28_28400 IPR005467 Histidine kinase domain LIT28_28400 IPR003660 HAMP domain LIT28_28400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIT28_28400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIT28_28400 IPR003594 Histidine kinase/HSP90-like ATPase LIT28_28400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIT28_28400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIT28_28435 IPR008947 Phospholipase C/P1 nuclease domain superfamily LIT28_28435 IPR001531 Zinc-dependent phospholipase C LIT28_28435 IPR029002 Phospholipase C/D LIT28_28480 IPR006076 FAD dependent oxidoreductase LIT28_28480 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_28480 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LIT28_28480 IPR038010 YhfW, C-terminal Rieske domain LIT28_28480 IPR005805 Rieske iron-sulphur protein, C-terminal LIT28_28480 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LIT28_28495 IPR001119 S-layer homology domain LIT28_28495 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LIT28_28500 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_28500 IPR005650 BlaI transcriptional regulatory family LIT28_28500 IPR036390 Winged helix DNA-binding domain superfamily LIT28_28510 IPR039564 Peptidase C39-like LIT28_28510 IPR039563 Peptidase C39 single domain protein LIT28_28510 IPR016997 Uncharacterised conserved protein UCP032442 LIT28_28515 IPR029058 Alpha/Beta hydrolase fold LIT28_28515 IPR000073 Alpha/beta hydrolase fold-1 LIT28_28515 IPR002410 Peptidase S33 LIT28_28515 IPR005945 Proline-specific peptidase LIT28_28540 IPR020792 Sulphate adenylyltransferase, prokaryotic-type LIT28_28540 IPR015947 PUA-like superfamily LIT28_28540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_28540 IPR025980 ATP-sulfurylase PUA-like domain LIT28_28540 IPR024951 Sulphate adenylyltransferase catalytic domain LIT28_28540 IPR002650 Sulphate adenylyltransferase LIT28_28545 IPR025980 ATP-sulfurylase PUA-like domain LIT28_28545 IPR015947 PUA-like superfamily LIT28_28545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIT28_28545 IPR020792 Sulphate adenylyltransferase, prokaryotic-type LIT28_28545 IPR024951 Sulphate adenylyltransferase catalytic domain LIT28_28545 IPR002650 Sulphate adenylyltransferase LIT28_28550 IPR012674 Calycin LIT28_28550 IPR015304 ZinT domain LIT28_28555 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily LIT28_28555 IPR006667 SLC41 divalent cation transporters, integral membrane domain LIT28_28555 IPR006669 Magnesium transporter MgtE LIT28_28555 IPR006668 Magnesium transporter, MgtE intracellular domain LIT28_28555 IPR038076 MgtE, N-terminal domain superfamily LIT28_28555 IPR038048 Magnesium transporter MgtE, transmembrane domain LIT28_28555 IPR000644 CBS domain LIT28_28565 IPR004107 Integrase, SAM-like, N-terminal LIT28_28565 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_28565 IPR013762 Integrase-like, catalytic domain superfamily LIT28_28565 IPR002104 Integrase, catalytic domain LIT28_28565 IPR010998 Integrase/recombinase, N-terminal LIT28_28565 IPR023670 Tyrosine recombinase XerS LIT28_28575 IPR017938 Riboflavin synthase-like beta-barrel LIT28_28575 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase LIT28_28575 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding LIT28_28575 IPR001128 Cytochrome P450 LIT28_28575 IPR036396 Cytochrome P450 superfamily LIT28_28575 IPR017927 FAD-binding domain, ferredoxin reductase-type LIT28_28575 IPR001094 Flavodoxin-like LIT28_28575 IPR017972 Cytochrome P450, conserved site LIT28_28575 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIT28_28575 IPR029039 Flavoprotein-like superfamily LIT28_28575 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIT28_28575 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily LIT28_28575 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIT28_28575 IPR008254 Flavodoxin/nitric oxide synthase LIT28_28580 IPR001094 Flavodoxin-like LIT28_28580 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIT28_28580 IPR017938 Riboflavin synthase-like beta-barrel LIT28_28580 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase LIT28_28580 IPR029039 Flavoprotein-like superfamily LIT28_28580 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIT28_28580 IPR008254 Flavodoxin/nitric oxide synthase LIT28_28580 IPR017927 FAD-binding domain, ferredoxin reductase-type LIT28_28580 IPR017972 Cytochrome P450, conserved site LIT28_28580 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily LIT28_28580 IPR001128 Cytochrome P450 LIT28_28580 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding LIT28_28580 IPR036396 Cytochrome P450 superfamily LIT28_28580 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIT28_28590 IPR006638 Elp3/MiaB/NifB LIT28_28590 IPR013483 Molybdenum cofactor biosynthesis protein A LIT28_28590 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site LIT28_28590 IPR007197 Radical SAM LIT28_28590 IPR013785 Aldolase-type TIM barrel LIT28_28590 IPR010505 Molybdenum cofactor synthesis C-terminal LIT28_28605 IPR003593 AAA+ ATPase domain LIT28_28605 IPR003439 ABC transporter-like LIT28_28605 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_28615 IPR003828 Epoxyqueuosine reductase QueH LIT28_28620 IPR011528 Nuclease-related domain, NERD LIT28_28630 IPR035919 EAL domain superfamily LIT28_28630 IPR001633 EAL domain LIT28_28630 IPR005330 MHYT domain LIT28_28630 IPR029787 Nucleotide cyclase LIT28_28630 IPR000160 GGDEF domain LIT28_28645 IPR001119 S-layer homology domain LIT28_28645 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain LIT28_28655 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily LIT28_28655 IPR003709 Peptidase M15B LIT28_28670 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIT28_28670 IPR010095 Transposase IS605, OrfB, C-terminal LIT28_28670 IPR021027 Transposase, putative, helix-turn-helix domain LIT28_28680 IPR000914 Solute-binding protein family 5 domain LIT28_28680 IPR023765 Solute-binding protein family 5, conserved site LIT28_28680 IPR030678 Peptide/nickel binding protein, MppA-type LIT28_28680 IPR039424 Solute-binding protein family 5 LIT28_28690 IPR001570 Peptidase M4, C-terminal LIT28_28690 IPR027268 Peptidase M4/M1, CTD superfamily LIT28_28690 IPR023612 Peptidase M4 LIT28_28690 IPR025711 PepSY domain LIT28_28690 IPR013856 Peptidase M4 domain LIT28_28690 IPR011096 FTP domain LIT28_28710 IPR029058 Alpha/Beta hydrolase fold LIT28_28710 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS LIT28_28710 IPR001031 Thioesterase LIT28_28715 IPR008278 4'-phosphopantetheinyl transferase domain LIT28_28715 IPR037143 4'-phosphopantetheinyl transferase domain superfamily LIT28_28715 IPR004568 Phosphopantetheine-protein transferase domain LIT28_28720 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LIT28_28720 IPR020845 AMP-binding, conserved site LIT28_28720 IPR006162 Phosphopantetheine attachment site LIT28_28720 IPR000873 AMP-dependent synthetase/ligase LIT28_28720 IPR042099 AMP-dependent synthetase-like superfamily LIT28_28720 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_28720 IPR036736 ACP-like superfamily LIT28_28720 IPR010060 Non-ribosomal peptide synthase LIT28_28720 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_28720 IPR010071 Amino acid adenylation domain LIT28_28720 IPR009081 Phosphopantetheine binding ACP domain LIT28_28720 IPR001242 Condensation domain LIT28_28725 IPR010080 Thioester reductase-like domain LIT28_28725 IPR006162 Phosphopantetheine attachment site LIT28_28725 IPR000873 AMP-dependent synthetase/ligase LIT28_28725 IPR036736 ACP-like superfamily LIT28_28725 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_28725 IPR020845 AMP-binding, conserved site LIT28_28725 IPR042099 AMP-dependent synthetase-like superfamily LIT28_28725 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_28725 IPR001242 Condensation domain LIT28_28725 IPR013120 Male sterility, NAD-binding LIT28_28725 IPR036291 NAD(P)-binding domain superfamily LIT28_28725 IPR010060 Non-ribosomal peptide synthase LIT28_28725 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LIT28_28725 IPR009081 Phosphopantetheine binding ACP domain LIT28_28725 IPR010071 Amino acid adenylation domain LIT28_28730 IPR010071 Amino acid adenylation domain LIT28_28730 IPR000873 AMP-dependent synthetase/ligase LIT28_28730 IPR009081 Phosphopantetheine binding ACP domain LIT28_28730 IPR006162 Phosphopantetheine attachment site LIT28_28730 IPR036736 ACP-like superfamily LIT28_28730 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LIT28_28730 IPR010060 Non-ribosomal peptide synthase LIT28_28730 IPR001242 Condensation domain LIT28_28730 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIT28_28730 IPR020845 AMP-binding, conserved site LIT28_28730 IPR025110 AMP-binding enzyme, C-terminal domain LIT28_28730 IPR042099 AMP-dependent synthetase-like superfamily LIT28_28735 IPR011701 Major facilitator superfamily LIT28_28735 IPR022324 Bacilysin exporter BacE, putative LIT28_28735 IPR036259 MFS transporter superfamily LIT28_28745 IPR012338 Beta-lactamase/transpeptidase-like LIT28_28745 IPR001466 Beta-lactamase-related LIT28_28750 IPR001466 Beta-lactamase-related LIT28_28750 IPR012338 Beta-lactamase/transpeptidase-like LIT28_28755 IPR001466 Beta-lactamase-related LIT28_28755 IPR012338 Beta-lactamase/transpeptidase-like LIT28_28760 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase LIT28_28760 IPR006326 UDP-glycosyltransferase, MGT LIT28_28765 IPR012337 Ribonuclease H-like superfamily LIT28_28765 IPR002559 Transposase, IS4-like LIT28_28775 IPR012337 Ribonuclease H-like superfamily LIT28_28775 IPR002559 Transposase, IS4-like LIT28_28780 IPR005001 RNA-binding protein Hfq LIT28_28780 IPR010920 LSM domain superfamily LIT28_28790 IPR000524 Transcription regulator HTH, GntR LIT28_28790 IPR011711 GntR, C-terminal LIT28_28790 IPR008920 Transcription regulator FadR/GntR, C-terminal LIT28_28790 IPR036390 Winged helix DNA-binding domain superfamily LIT28_28790 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_28790 IPR000485 AsnC-type HTH domain LIT28_28795 IPR032713 Putative multidrug resistance efflux transporter LIT28_28805 IPR020139 Protein of unknown function DUF2642 LIT28_28820 IPR036101 CarD-like/TRCF domain superfamily LIT28_28820 IPR003711 CarD-like/TRCF domain LIT28_28820 IPR042215 CarD-like, C-terminal domain LIT28_28840 IPR012156 Cold shock, CspA LIT28_28840 IPR011129 Cold shock domain LIT28_28840 IPR012340 Nucleic acid-binding, OB-fold LIT28_28840 IPR019844 Cold-shock (CSD) domain LIT28_28840 IPR002059 Cold-shock protein, DNA-binding LIT28_28880 IPR000209 Peptidase S8/S53 domain LIT28_28880 IPR036852 Peptidase S8/S53 domain superfamily LIT28_28880 IPR023827 Peptidase S8, subtilisin, Asp-active site LIT28_28880 IPR022398 Peptidase S8, subtilisin, His-active site LIT28_28880 IPR023828 Peptidase S8, subtilisin, Ser-active site LIT28_28880 IPR015500 Peptidase S8, subtilisin-related LIT28_28880 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily LIT28_28880 IPR041909 Sbi, C3 binding domain IV LIT28_28880 IPR034202 Subtilisin Carlsberg-like catalytic domain LIT28_28915 IPR011990 Tetratricopeptide-like helical domain superfamily LIT28_28915 IPR040702 Response regulator aspartate phosphatase, N-terminal LIT28_28915 IPR013026 Tetratricopeptide repeat-containing domain LIT28_28915 IPR019734 Tetratricopeptide repeat LIT28_28930 IPR024203 5-deoxy-glucuronate isomerase, IolB LIT28_28930 IPR023770 5-deoxy-glucuronate isomerase, Bacilli LIT28_28930 IPR021120 KduI/IolB isomerase LIT28_28930 IPR014710 RmlC-like jelly roll fold LIT28_28930 IPR011051 RmlC-like cupin domain superfamily LIT28_28935 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 LIT28_28935 IPR013785 Aldolase-type TIM barrel LIT28_28935 IPR000771 Fructose-bisphosphate aldolase, class-II LIT28_28940 IPR030823 IolE/MocC family LIT28_28940 IPR023952 Inosose dehydratase LIT28_28940 IPR036237 Xylose isomerase-like superfamily LIT28_28940 IPR013022 Xylose isomerase-like, TIM barrel domain LIT28_28945 IPR000399 TPP-binding enzyme, conserved site LIT28_28945 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LIT28_28945 IPR029061 Thiamin diphosphate-binding fold LIT28_28945 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes LIT28_28945 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LIT28_28945 IPR012000 Thiamine pyrophosphate enzyme, central domain LIT28_28945 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIT28_28945 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase LIT28_28950 IPR016163 Aldehyde dehydrogenase, C-terminal LIT28_28950 IPR016160 Aldehyde dehydrogenase, cysteine active site LIT28_28950 IPR016162 Aldehyde dehydrogenase, N-terminal LIT28_28950 IPR015590 Aldehyde dehydrogenase domain LIT28_28950 IPR010061 Methylmalonate-semialdehyde dehydrogenase LIT28_28950 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria LIT28_28950 IPR016161 Aldehyde/histidinol dehydrogenase LIT28_28955 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes LIT28_28955 IPR029056 Ribokinase-like LIT28_28955 IPR011611 Carbohydrate kinase PfkB LIT28_28955 IPR030830 5-Dehydro-2-deoxygluconokinase LIT28_28955 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LIT28_28955 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily LIT28_28960 IPR000683 Oxidoreductase, N-terminal LIT28_28960 IPR036291 NAD(P)-binding domain superfamily LIT28_28960 IPR030827 Inositol 2-dehydrogenase LIT28_28960 IPR004104 Oxidoreductase, C-terminal LIT28_28965 IPR036259 MFS transporter superfamily LIT28_28965 IPR020846 Major facilitator superfamily domain LIT28_28965 IPR011701 Major facilitator superfamily LIT28_28965 IPR004748 Polyol permease LIT28_28970 IPR000843 LacI-type HTH domain LIT28_28970 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_28970 IPR028082 Periplasmic binding protein-like I LIT28_29000 IPR001405 Uncharacterised protein family UPF0758 LIT28_29000 IPR037518 MPN domain LIT28_29000 IPR025657 RadC-like JAB domain LIT28_29000 IPR010994 RuvA domain 2-like LIT28_29000 IPR020891 Uncharacterised protein family UPF0758, conserved site LIT28_29075 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_29075 IPR021961 Protein of unknown function DUF3578 LIT28_29075 IPR003593 AAA+ ATPase domain LIT28_29075 IPR011704 ATPase, dynein-related, AAA domain LIT28_29090 IPR021027 Transposase, putative, helix-turn-helix domain LIT28_29090 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIT28_29090 IPR010095 Transposase IS605, OrfB, C-terminal LIT28_29100 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily LIT28_29100 IPR002502 N-acetylmuramoyl-L-alanine amidase domain LIT28_29100 IPR003646 SH3-like domain, bacterial-type LIT28_29225 IPR027924 Phage-like element PBSX protein, XkdF LIT28_29295 IPR006200 Transcription regulator LexA LIT28_29295 IPR039418 LexA-like LIT28_29295 IPR036286 LexA/Signal peptidase-like superfamily LIT28_29295 IPR006199 LexA repressor, DNA-binding domain LIT28_29295 IPR006197 Peptidase S24, LexA-like LIT28_29295 IPR015927 Peptidase S24/S26A/S26B/S26C LIT28_29295 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_29295 IPR036390 Winged helix DNA-binding domain superfamily LIT28_29320 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIT28_29320 IPR001279 Metallo-beta-lactamase LIT28_29320 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain LIT28_29320 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain LIT28_29320 IPR017782 Hydroxyacylglutathione hydrolase LIT28_29335 IPR002656 Acyltransferase 3 LIT28_29335 IPR036514 SGNH hydrolase superfamily LIT28_29350 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_29350 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_29350 IPR041027 FtsK alpha domain LIT28_29350 IPR036390 Winged helix DNA-binding domain superfamily LIT28_29350 IPR018541 FtsK gamma domain LIT28_29350 IPR002543 FtsK domain LIT28_29365 IPR011105 Cell wall hydrolase, SleB LIT28_29365 IPR042047 Cell wall hydrolase SleB, domain 1 LIT28_29375 IPR040702 Response regulator aspartate phosphatase, N-terminal LIT28_29375 IPR013026 Tetratricopeptide repeat-containing domain LIT28_29375 IPR011990 Tetratricopeptide-like helical domain superfamily LIT28_29375 IPR019734 Tetratricopeptide repeat LIT28_29420 IPR029058 Alpha/Beta hydrolase fold LIT28_29420 IPR002938 FAD-binding domain LIT28_29420 IPR036188 FAD/NAD(P)-binding domain superfamily LIT28_29435 IPR006118 Recombinase, conserved site LIT28_29435 IPR006119 Resolvase, N-terminal catalytic domain LIT28_29435 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LIT28_29435 IPR006120 Resolvase, HTH domain LIT28_29440 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain LIT28_29440 IPR015815 3-hydroxyisobutyrate dehydrogenase-related LIT28_29440 IPR036291 NAD(P)-binding domain superfamily LIT28_29440 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_29440 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_29440 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LIT28_29490 IPR024542 Domain of unknown function DUF3880 LIT28_29495 IPR013785 Aldolase-type TIM barrel LIT28_29495 IPR013132 N-acetylneuraminic acid synthase, N-terminal LIT28_29495 IPR020030 Pseudaminic acid biosynthesis, PseI LIT28_29495 IPR013974 SAF domain LIT28_29495 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal LIT28_29495 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily LIT28_29510 IPR003329 Acylneuraminate cytidylyltransferase LIT28_29510 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_29510 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase LIT28_29515 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LIT28_29515 IPR015424 Pyridoxal phosphate-dependent transferase LIT28_29515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIT28_29515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIT28_29520 IPR005888 dTDP-glucose 4,6-dehydratase LIT28_29520 IPR036291 NAD(P)-binding domain superfamily LIT28_29520 IPR016040 NAD(P)-binding domain LIT28_29525 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain LIT28_29525 IPR036291 NAD(P)-binding domain superfamily LIT28_29525 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain LIT28_29535 IPR001173 Glycosyltransferase 2-like LIT28_29535 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_29540 IPR029044 Nucleotide-diphospho-sugar transferases LIT28_29540 IPR001173 Glycosyltransferase 2-like LIT28_29550 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_29550 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIT28_29550 IPR036291 NAD(P)-binding domain superfamily LIT28_29550 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIT28_29560 IPR013132 N-acetylneuraminic acid synthase, N-terminal LIT28_29560 IPR020007 N-acetylneuraminate synthase LIT28_29560 IPR013785 Aldolase-type TIM barrel LIT28_29560 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily LIT28_29560 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal LIT28_29560 IPR013974 SAF domain LIT28_29565 IPR036291 NAD(P)-binding domain superfamily LIT28_29565 IPR002347 Short-chain dehydrogenase/reductase SDR LIT28_29575 IPR007554 CDP-glycerol glycerophosphotransferase LIT28_29580 IPR011045 Nitrous oxide reductase, N-terminal LIT28_29580 IPR015943 WD40/YVTN repeat-like-containing domain superfamily LIT28_29595 IPR001845 HTH ArsR-type DNA-binding domain LIT28_29595 IPR011991 ArsR-like helix-turn-helix domain LIT28_29595 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_29595 IPR036390 Winged helix DNA-binding domain superfamily LIT28_29600 IPR001119 S-layer homology domain LIT28_29610 IPR014756 Immunoglobulin E-set LIT28_29610 IPR004302 Cellulose/chitin-binding protein, N-terminal LIT28_29610 IPR041029 N-acetylglucosamine binding protein A domain 2 LIT28_29610 IPR020879 N-acetylglucosamine-binding protein A LIT28_29630 IPR001448 Small acid-soluble spore protein, alpha/beta-type LIT28_29630 IPR038300 SASP, alpha/beta-type superfamily LIT28_29630 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site LIT28_29635 IPR013655 PAS fold-3 LIT28_29635 IPR004090 Chemotaxis methyl-accepting receptor LIT28_29635 IPR035965 PAS domain superfamily LIT28_29635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT28_29635 IPR001610 PAC motif LIT28_29635 IPR000014 PAS domain LIT28_29635 IPR000700 PAS-associated, C-terminal LIT28_29640 IPR011096 FTP domain LIT28_29640 IPR025711 PepSY domain LIT28_29640 IPR023612 Peptidase M4 LIT28_29640 IPR027268 Peptidase M4/M1, CTD superfamily LIT28_29640 IPR001570 Peptidase M4, C-terminal LIT28_29640 IPR013856 Peptidase M4 domain LIT28_29680 IPR014243 Transcription factor, RsfA LIT28_29680 IPR009057 Homeobox-like domain superfamily LIT28_29680 IPR017930 Myb domain LIT28_29700 IPR038765 Papain-like cysteine peptidase superfamily LIT28_29700 IPR023346 Lysozyme-like domain superfamily LIT28_29700 IPR000064 Endopeptidase, NLPC/P60 domain LIT28_29705 IPR000477 Reverse transcriptase domain LIT28_29750 IPR006183 6-phosphogluconate dehydrogenase LIT28_29750 IPR036291 NAD(P)-binding domain superfamily LIT28_29750 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LIT28_29750 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating LIT28_29750 IPR006114 6-phosphogluconate dehydrogenase, C-terminal LIT28_29750 IPR006184 6-phosphogluconate-binding site LIT28_29750 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIT28_29750 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIT28_29755 IPR003474 Gluconate transporter LIT28_29760 IPR006002 Gluconate kinase LIT28_29760 IPR018484 Carbohydrate kinase, FGGY, N-terminal LIT28_29760 IPR018485 Carbohydrate kinase, FGGY, C-terminal LIT28_29760 IPR018483 Carbohydrate kinase, FGGY, conserved site LIT28_29760 IPR000577 Carbohydrate kinase, FGGY LIT28_29765 IPR000524 Transcription regulator HTH, GntR LIT28_29765 IPR008920 Transcription regulator FadR/GntR, C-terminal LIT28_29765 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_29765 IPR011711 GntR, C-terminal LIT28_29765 IPR036390 Winged helix DNA-binding domain superfamily LIT28_29775 IPR012337 Ribonuclease H-like superfamily LIT28_29775 IPR002559 Transposase, IS4-like LIT28_29780 IPR000073 Alpha/beta hydrolase fold-1 LIT28_29780 IPR029058 Alpha/Beta hydrolase fold LIT28_29835 IPR010095 Transposase IS605, OrfB, C-terminal LIT28_29835 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIT28_29835 IPR021027 Transposase, putative, helix-turn-helix domain LIT28_29845 IPR014284 RNA polymerase sigma-70 like domain LIT28_29845 IPR000943 RNA polymerase sigma-70 LIT28_29845 IPR007627 RNA polymerase sigma-70 region 2 LIT28_29845 IPR007624 RNA polymerase sigma-70 region 3 LIT28_29845 IPR007630 RNA polymerase sigma-70 region 4 LIT28_29845 IPR009042 RNA polymerase sigma-70 region 1.2 LIT28_29845 IPR013325 RNA polymerase sigma factor, region 2 LIT28_29845 IPR013324 RNA polymerase sigma factor, region 3/4-like LIT28_29845 IPR012760 RNA polymerase sigma factor RpoD, C-terminal LIT28_29845 IPR028630 RNA polymerase sigma factor RpoD LIT28_29845 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_29845 IPR042189 Sigma-70 factor, region 1.1 superfamily LIT28_29845 IPR007127 RNA polymerase sigma factor 70, region 1.1 LIT28_29865 IPR009061 Putative DNA-binding domain superfamily LIT28_29865 IPR000551 MerR-type HTH domain LIT28_29865 IPR025052 Domain of unknown function DUF3967 LIT28_29870 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIT28_29870 IPR001387 Cro/C1-type helix-turn-helix domain LIT28_29885 IPR002104 Integrase, catalytic domain LIT28_29885 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIT28_29885 IPR013762 Integrase-like, catalytic domain superfamily LIT28_29895 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_29895 IPR025669 AAA domain LIT28_29900 IPR014820 Primase, C-terminal 1 LIT28_29910 IPR003439 ABC transporter-like LIT28_29910 IPR003593 AAA+ ATPase domain LIT28_29910 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_29955 IPR027632 Type 2 lantibiotic, SP_1948 family LIT28_29960 IPR027632 Type 2 lantibiotic, SP_1948 family LIT28_29965 IPR027632 Type 2 lantibiotic, SP_1948 family LIT28_29970 IPR027632 Type 2 lantibiotic, SP_1948 family LIT28_29975 IPR027632 Type 2 lantibiotic, SP_1948 family LIT28_29980 IPR027632 Type 2 lantibiotic, SP_1948 family LIT28_29985 IPR027632 Type 2 lantibiotic, SP_1948 family LIT28_29990 IPR029243 Lantibiotic alpha component LIT28_29995 IPR029243 Lantibiotic alpha component LIT28_30000 IPR029243 Lantibiotic alpha component LIT28_30010 IPR015500 Peptidase S8, subtilisin-related LIT28_30010 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily LIT28_30010 IPR023828 Peptidase S8, subtilisin, Ser-active site LIT28_30010 IPR022398 Peptidase S8, subtilisin, His-active site LIT28_30010 IPR036852 Peptidase S8/S53 domain superfamily LIT28_30010 IPR000209 Peptidase S8/S53 domain LIT28_30010 IPR008357 Lantibiotic leader peptide-processing serine protease LIT28_30010 IPR023827 Peptidase S8, subtilisin, Asp-active site LIT28_30015 IPR003593 AAA+ ATPase domain LIT28_30015 IPR003439 ABC transporter-like LIT28_30015 IPR017871 ABC transporter, conserved site LIT28_30015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_30030 IPR039421 Type I protein exporter LIT28_30030 IPR005074 Peptidase C39, bacteriocin processing LIT28_30030 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIT28_30030 IPR033838 Colicin V processing peptidase LIT28_30030 IPR003593 AAA+ ATPase domain LIT28_30030 IPR003439 ABC transporter-like LIT28_30030 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIT28_30030 IPR011527 ABC transporter type 1, transmembrane domain LIT28_30030 IPR017871 ABC transporter, conserved site LIT28_30070 IPR036388 Winged helix-like DNA-binding domain superfamily LIT28_30070 IPR036390 Winged helix DNA-binding domain superfamily LIT28_30070 IPR012318 Crp-type HTH domain LIT28_30070 IPR008813 Plasmid replication protein, RepL LIT28_30085 IPR001668 Plasmid recombination enzyme