locus-tag	class	description
CUC43_00020	COG0242	peptide deformylase activity
CUC43_00040	COG0194	GDP metabolic process
CUC43_00050	COG1561	YicC-like family, N-terminal region
CUC43_00055	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CUC43_00070	COG0006	proline dipeptidase activity
CUC43_00095	COG3069	C4-dicarboxylate transmembrane transporter activity
CUC43_00105	COG1011	Hydrolase
CUC43_00135	COG0505	Belongs to the CarA family
CUC43_00160	COG0564	pseudouridine synthase activity
CUC43_00180	COG3599	regulation of cell shape
CUC43_00185	COG2302	S4 RNA-binding domain
CUC43_00190	COG0762	integral membrane protein
CUC43_00200	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CUC43_00210	COG1873	PFAM PRC-barrel domain
CUC43_00215	COG1191	sigma factor activity
CUC43_00220	COG1191	sigma factor activity
CUC43_00230	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CUC43_00235	COG0849	cell division
CUC43_00240	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CUC43_00250	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CUC43_00255	COG0772	Belongs to the SEDS family
CUC43_00270	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CUC43_00275	COG0768	penicillin binding
CUC43_00285	COG4839	cell division protein FtsL
CUC43_00300	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CUC43_00320	COG1399	metal-binding, possibly nucleic acid-binding protein
CUC43_00445	COG4626	Terminase
CUC43_00445	COG1802	Transcriptional regulator
CUC43_00485	COG0582	viral genome integration into host DNA
CUC43_00505	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_00585	COG2002	toxin-antitoxin pair type II binding
CUC43_00595	COG1484	DNA-dependent DNA replication
CUC43_00625	COG1396	sequence-specific DNA binding
CUC43_00640	COG1396	sequence-specific DNA binding
CUC43_00660	COG0582	viral genome integration into host DNA
CUC43_00670	COG3480	Lon protease (S16) C-terminal proteolytic domain
CUC43_00680	COG3314	Sporulation integral membrane protein YlbJ
CUC43_00690	COG0742	ribosomal rna small subunit methyltransferase
CUC43_00710	COG3679	Belongs to the UPF0342 family
CUC43_00715	COG0406	alpha-ribazole phosphatase activity
CUC43_00730	COG2340	Cysteine-rich secretory protein family
CUC43_00740	COG3336	cytochrome c oxidase
CUC43_00775	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CUC43_00785	COG0772	Belongs to the SEDS family
CUC43_00795	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUC43_00800	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CUC43_00810	COG4896	Protein conserved in bacteria
CUC43_00835	COG0483	inositol monophosphate 1-phosphatase activity
CUC43_00855	COG1982	Orn Lys Arg decarboxylase major
CUC43_00905	COG0022	dehydrogenase e1 component
CUC43_00910	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CUC43_00920	COG0242	peptide deformylase activity
CUC43_00925	COG0561	phosphatase activity
CUC43_00940	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CUC43_00945	COG0569	domain protein
CUC43_00965	COG0583	DNA-binding transcription factor activity
CUC43_00970	COG0517	IMP dehydrogenase activity
CUC43_00980	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CUC43_00990	COG4703	Protein of unknown function (DUF1797)
CUC43_01005	COG2200	EAL domain
CUC43_01010	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_01015	COG1408	metallophosphoesterase
CUC43_01030	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CUC43_01070	COG2814	Major facilitator Superfamily
CUC43_01090	COG3209	COG3209 Rhs family protein
CUC43_01105	COG2205	protein histidine kinase activity
CUC43_01115	COG0436	Aminotransferase
CUC43_01120	COG1609	Transcriptional regulator
CUC43_01125	COG3833	ABC-type maltose transport systems, permease component
CUC43_01130	COG1175	transmembrane transport
CUC43_01135	COG2182	Extracellular solute-binding protein
CUC43_01145	COG0366	Alpha amylase catalytic
CUC43_01150	COG3842	ATPase activity
CUC43_01190	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CUC43_01195	COG0183	Belongs to the thiolase family
CUC43_01230	COG1695	Transcriptional regulator
CUC43_01235	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_01255	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CUC43_01260	COG0436	Aminotransferase
CUC43_01295	COG2084	Dehydrogenase
CUC43_01305	COG2199	diguanylate cyclase activity
CUC43_01305	COG2203	Gaf domain
CUC43_01310	COG0778	Nitroreductase
CUC43_01335	COG1263	PTS System
CUC43_01335	COG2190	(PTS) system
CUC43_01335	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CUC43_01340	COG3711	transcriptional antiterminator
CUC43_01360	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CUC43_01390	COG1547	Domain of unknown function (DUF309)
CUC43_01395	COG0456	acetyltransferase
CUC43_01405	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CUC43_01410	COG4086	secreted protein
CUC43_01415	COG0561	phosphatase activity
CUC43_01420	COG0697	spore germination
CUC43_01435	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CUC43_01460	COG0733	neurotransmitter:sodium symporter activity
CUC43_01480	COG1686	Belongs to the peptidase S11 family
CUC43_01490	COG1725	Transcriptional regulator
CUC43_01495	COG1131	(ABC) transporter
CUC43_01515	COG1846	Transcriptional regulator
CUC43_01530	COG0598	Magnesium transport protein CorA
CUC43_01555	COG4974	Belongs to the 'phage' integrase family
CUC43_01565	COG0735	belongs to the Fur family
CUC43_01570	COG1300	Membrane
CUC43_01590	COG0667	Aldo Keto reductase
CUC43_01595	COG0656	L-ascorbic acid biosynthetic process
CUC43_01600	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CUC43_01600	COG0456	acetyltransferase
CUC43_01610	COG4085	toxin activity
CUC43_01610	COG1525	nuclease
CUC43_01610	COG0737	Belongs to the 5'-nucleotidase family
CUC43_01620	COG0596	Alpha beta hydrolase
CUC43_01625	COG2056	Na+-H+ antiporter family
CUC43_01630	COG1609	Transcriptional regulator
CUC43_01635	COG0456	acetyltransferase
CUC43_01640	COG1073	alpha beta
CUC43_01655	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CUC43_01655	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CUC43_01660	COG0307	riboflavin synthase, alpha
CUC43_01680	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CUC43_01685	COG4106	trans-aconitate 2-methyltransferase activity
CUC43_01690	COG2226	methyltransferase
CUC43_01690	COG1073	alpha beta
CUC43_01705	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUC43_01725	COG0737	Belongs to the 5'-nucleotidase family
CUC43_01735	COG1522	sequence-specific DNA binding
CUC43_01755	COG5444	nuclease activity
CUC43_01765	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CUC43_01790	COG0300	oxidoreductase activity
CUC43_01795	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_01800	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CUC43_01805	COG1760	l-serine dehydratase
CUC43_01810	COG1760	l-serine dehydratase
CUC43_01835	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CUC43_01845	COG2195	Cleaves the N-terminal amino acid of tripeptides
CUC43_01850	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUC43_01865	COG1376	ErfK ybiS ycfS ynhG family protein
CUC43_01870	COG4129	membrane
CUC43_01875	COG1126	abc transporter atp-binding protein
CUC43_01880	COG0765	amino acid transport
CUC43_01885	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUC43_01910	COG2323	membrane
CUC43_01915	COG0772	Belongs to the SEDS family
CUC43_01925	COG0508	dehydrogenase complex catalyzes the overall conversion of
CUC43_01930	COG0022	dehydrogenase e1 component
CUC43_01935	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CUC43_01940	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CUC43_01950	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CUC43_01955	COG0280	phosphate acetyltransferase
CUC43_01965	COG3829	transcription factor binding
CUC43_01965	COG3290	protein histidine kinase activity
CUC43_01975	COG0584	glycerophosphoryl diester phosphodiesterase
CUC43_01980	COG3093	addiction module antidote protein HigA
CUC43_01990	COG0745	RESPONSE REGULATOR receiver
CUC43_02000	COG0750	zinc metalloprotease
CUC43_02005	COG0497	DNA recombination
CUC43_02015	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CUC43_02025	COG0142	geranyltranstransferase activity
CUC43_02050	COG1302	Protein conserved in bacteria
CUC43_02055	COG0439	Biotin carboxylase
CUC43_02060	COG0511	ligase activity, forming carbon-carbon bonds
CUC43_02105	COG3854	ATPases associated with a variety of cellular activities
CUC43_02130	COG0006	proline dipeptidase activity
CUC43_02145	COG3872	metal-dependent enzyme
CUC43_02155	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUC43_02190	COG0095	Lipoate-protein ligase
CUC43_02195	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CUC43_02205	COG1609	Transcriptional regulator
CUC43_02215	COG2076	Multidrug Resistance protein
CUC43_02220	COG2076	Multidrug Resistance protein
CUC43_02265	COG1725	Transcriptional regulator
CUC43_02300	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CUC43_02360	COG4970	Tfp pilus assembly protein FimT
CUC43_02370	COG1459	type II secretion system
CUC43_02375	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CUC43_02430	COG1410	methionine synthase
CUC43_02430	COG0646	methionine synthase
CUC43_02435	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CUC43_02435	COG0646	methionine synthase
CUC43_02440	COG0626	cystathionine gamma-synthase activity
CUC43_02445	COG0626	cystathionine gamma-synthase activity
CUC43_02465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_02475	COG1940	carbohydrate kinase activity
CUC43_02480	COG4483	Protein conserved in bacteria
CUC43_02485	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CUC43_02495	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CUC43_02500	COG0704	Plays a role in the regulation of phosphate uptake
CUC43_02505	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CUC43_02510	COG0581	inorganic phosphate transmembrane transporter activity
CUC43_02515	COG0573	inorganic phosphate transmembrane transporter activity
CUC43_02520	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CUC43_02530	COG0477	Major facilitator Superfamily
CUC43_02535	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CUC43_02560	COG0735	belongs to the Fur family
CUC43_02565	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CUC43_02570	COG1121	(ABC) transporter
CUC43_02575	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_02605	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CUC43_02610	COG2384	SAM-dependent methyltransferase
CUC43_02615	COG2010	Cytochrome c
CUC43_02620	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CUC43_02625	COG0358	DNA primase activity
CUC43_02650	COG0517	IMP dehydrogenase activity
CUC43_02665	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CUC43_02670	COG0295	cytidine deaminase activity
CUC43_02675	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CUC43_02685	COG1480	7TM receptor with intracellular HD hydrolase
CUC43_02690	COG1702	phosphate starvation-inducible protein PhoH
CUC43_02710	COG1610	YqeY-like protein
CUC43_02730	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CUC43_02735	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CUC43_02765	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CUC43_02770	COG1733	regulation of RNA biosynthetic process
CUC43_02795	COG1466	dna polymerase III delta subunit
CUC43_02805	COG2333	competence protein COMEC
CUC43_02805	COG0658	competence protein
CUC43_02810	COG2131	deaminase
CUC43_02815	COG1555	photosystem II stabilization
CUC43_02815	COG1596	polysaccharide export
CUC43_02820	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CUC43_02825	COG2226	methyltransferase
CUC43_02830	COG0799	negative regulation of ribosome biogenesis
CUC43_02835	COG1713	HD superfamily hydrolase involved in NAD metabolism
CUC43_02845	COG1534	Rna-binding protein
CUC43_02855	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CUC43_02860	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CUC43_02875	COG1191	sigma factor activity
CUC43_02900	COG2357	RelA SpoT domain protein
CUC43_02910	COG1785	Belongs to the alkaline phosphatase family
CUC43_02925	COG2267	carboxylic ester hydrolase activity
CUC43_02960	COG1404	Belongs to the peptidase S8 family
CUC43_02965	COG3186	Phenylalanine-4-hydroxylase
CUC43_02975	COG2514	catechol 2,3-dioxygenase activity
CUC43_02980	COG2259	Doxx family
CUC43_03020	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUC43_03035	COG1012	belongs to the aldehyde dehydrogenase family
CUC43_03035	COG1454	alcohol dehydrogenase
CUC43_03040	COG0626	cystathionine gamma-synthase activity
CUC43_03045	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CUC43_03070	COG0768	penicillin binding
CUC43_03100	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CUC43_03130	COG0628	permease
CUC43_03150	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CUC43_03165	COG1104	cysteine desulfurase activity
CUC43_03170	COG1959	2 iron, 2 sulfur cluster binding
CUC43_03175	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CUC43_03190	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CUC43_03220	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CUC43_03230	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CUC43_03230	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CUC43_03235	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CUC43_03240	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CUC43_03240	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CUC43_03250	COG2244	polysaccharide biosynthetic process
CUC43_03255	COG2323	membrane
CUC43_03265	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_03275	COG1862	Preprotein translocase
CUC43_03305	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CUC43_03315	COG0697	spore germination
CUC43_03320	COG0640	Transcriptional regulator
CUC43_03345	COG0157	Belongs to the NadC ModD family
CUC43_03350	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CUC43_03355	COG1104	cysteine desulfurase activity
CUC43_03360	COG1827	regulation of RNA biosynthetic process
CUC43_03365	COG2258	MOSC domain
CUC43_03375	COG0077	Prephenate dehydratase
CUC43_03380	COG0577	efflux transmembrane transporter activity
CUC43_03385	COG0577	efflux transmembrane transporter activity
CUC43_03390	COG1136	(ABC) transporter
CUC43_03395	COG5002	protein histidine kinase activity
CUC43_03400	COG0745	RESPONSE REGULATOR receiver
CUC43_03410	COG3290	protein histidine kinase activity
CUC43_03420	COG2868	ribosomal protein
CUC43_03430	COG1530	ribonuclease E activity
CUC43_03435	COG1994	Peptidase M50
CUC43_03440	COG0739	heme binding
CUC43_03445	COG2894	cell division
CUC43_03460	COG1792	Involved in formation and maintenance of cell shape
CUC43_03465	COG1077	Cell shape determining protein MreB Mrl
CUC43_03490	COG0285	dihydrofolate synthase activity
CUC43_03505	COG1388	LysM domain
CUC43_03515	COG0113	porphobilinogen synthase activity
CUC43_03520	COG1587	Uroporphyrinogen-III synthase
CUC43_03530	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CUC43_03540	COG1846	Transcriptional regulator
CUC43_03545	COG1764	response to oxidative stress
CUC43_03560	COG0470	DNA polymerase III
CUC43_03560	COG1067	ATP-dependent peptidase activity
CUC43_03630	COG0622	Phosphoesterase
CUC43_03645	COG5401	PFAM Sporulation and spore germination
CUC43_03665	COG1309	transcriptional regulator
CUC43_03675	COG2197	response regulator
CUC43_03680	COG2233	PERMEase
CUC43_03685	COG0402	S-adenosylhomocysteine deaminase activity
CUC43_03690	COG1983	PspC domain protein
CUC43_03695	COG1396	sequence-specific DNA binding
CUC43_03700	COG0697	spore germination
CUC43_03710	COG1959	2 iron, 2 sulfur cluster binding
CUC43_03715	COG1668	transmembrane transport
CUC43_03720	COG4152	abc transporter atp-binding protein
CUC43_03725	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CUC43_03730	COG1360	Flagellar Motor Protein
CUC43_03735	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CUC43_03745	COG1876	peptidase activity
CUC43_03750	COG0824	Thioesterase
CUC43_03755	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CUC43_03760	COG1053	succinate dehydrogenase
CUC43_03765	COG2009	succinate dehydrogenase
CUC43_03770	COG1719	4-vinyl reductase, 4VR
CUC43_03780	COG3118	belongs to the thioredoxin family
CUC43_03785	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CUC43_03790	COG2086	electron transfer activity
CUC43_03795	COG1024	Enoyl-CoA hydratase
CUC43_03800	COG1309	transcriptional regulator
CUC43_03805	COG0318	PFAM AMP-dependent synthetase and ligase
CUC43_03815	COG2318	DinB family
CUC43_03845	COG1131	(ABC) transporter
CUC43_03850	COG2205	protein histidine kinase activity
CUC43_03855	COG0745	RESPONSE REGULATOR receiver
CUC43_03865	COG4895	conserved protein (DUF2196)
CUC43_03870	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CUC43_03880	COG4509	Sortase family
CUC43_03885	COG1120	ATPase activity
CUC43_03900	COG5386	Cell surface protein
CUC43_03910	COG5386	Cell surface protein
CUC43_03915	COG1114	Component of the transport system for branched-chain amino acids
CUC43_03920	COG1187	pseudouridine synthase activity
CUC43_03935	COG1796	DNA polymerase
CUC43_03935	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CUC43_03940	COG1286	toxin biosynthetic process
CUC43_03970	COG0017	Asparaginyl-tRNA synthetase
CUC43_03985	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CUC43_03995	COG1418	mRNA catabolic process
CUC43_04005	COG2814	Major facilitator Superfamily
CUC43_04010	COG1566	PFAM secretion protein HlyD family protein
CUC43_04015	COG1309	transcriptional regulator
CUC43_04020	COG1363	Peptidase, m42
CUC43_04040	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CUC43_04045	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CUC43_04055	COG1484	DNA-dependent DNA replication
CUC43_04060	COG3611	Membrane attachment protein
CUC43_04070	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CUC43_04080	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CUC43_04085	COG0237	dephospho-CoA kinase activity
CUC43_04090	COG1971	Probably functions as a manganese efflux pump
CUC43_04100	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CUC43_04100	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CUC43_04105	COG5002	protein histidine kinase activity
CUC43_04110	COG0745	RESPONSE REGULATOR receiver
CUC43_04135	COG0538	isocitrate dehydrogenase activity
CUC43_04140	COG0372	Belongs to the citrate synthase family
CUC43_04155	COG0628	permease
CUC43_04160	COG3030	protein affecting phage T7 exclusion by the F plasmid
CUC43_04185	COG1725	Transcriptional regulator
CUC43_04190	COG0281	malic enzyme
CUC43_04195	COG0587	DNA-directed DNA polymerase activity
CUC43_04210	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CUC43_04230	COG4109	DRTGG domain
CUC43_04245	COG0006	proline dipeptidase activity
CUC43_04300	COG0662	Cupin 2, conserved barrel domain protein
CUC43_04310	COG1476	TRANSCRIPTIONal
CUC43_04325	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_04330	COG0589	response to stress
CUC43_04380	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_04405	COG0827	DNA restriction-modification system
CUC43_04410	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CUC43_04415	COG3874	Sporulation protein YtfJ
CUC43_04425	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CUC43_04430	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CUC43_04440	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CUC43_04455	COG1104	cysteine desulfurase activity
CUC43_04470	COG0583	DNA-binding transcription factor activity
CUC43_04475	COG0697	spore germination
CUC43_04480	COG1309	transcriptional regulator
CUC43_04485	COG1956	GAF domain-containing protein
CUC43_04490	COG0626	cystathionine gamma-synthase activity
CUC43_04545	COG1595	DNA-templated transcription, initiation
CUC43_04560	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CUC43_04565	COG0454	-acetyltransferase
CUC43_04570	COG0517	IMP dehydrogenase activity
CUC43_04575	COG0123	including yeast histone deacetylase and acetoin utilization protein
CUC43_04580	COG2267	carboxylic ester hydrolase activity
CUC43_04590	COG0745	RESPONSE REGULATOR receiver
CUC43_04595	COG5002	protein histidine kinase activity
CUC43_04605	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_04615	COG0666	response to abiotic stimulus
CUC43_04650	COG1609	Transcriptional regulator
CUC43_04660	COG4851	CamS sex pheromone cAM373 precursor
CUC43_04665	COG3118	belongs to the thioredoxin family
CUC43_04675	COG2309	aminopeptidase activity
CUC43_04700	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUC43_04705	COG0697	spore germination
CUC43_04710	COG0789	Transcriptional regulator
CUC43_04715	COG1695	Transcriptional regulator
CUC43_04735	COG1674	ftsk spoiiie
CUC43_04750	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CUC43_04760	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CUC43_04765	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CUC43_04770	COG1363	Peptidase, m42
CUC43_04785	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_04800	COG0510	thiamine kinase activity
CUC43_04805	COG1523	belongs to the glycosyl hydrolase 13 family
CUC43_04820	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUC43_04825	COG1349	DNA-binding transcription factor activity
CUC43_04830	COG1187	pseudouridine synthase activity
CUC43_04835	COG2244	polysaccharide biosynthetic process
CUC43_04840	COG2081	HI0933 family
CUC43_04850	COG2814	Major facilitator Superfamily
CUC43_04860	COG3832	glyoxalase III activity
CUC43_04885	COG1329	Transcriptional regulator
CUC43_04910	COG0314	molybdopterin synthase activity
CUC43_04915	COG1763	Mo-molybdopterin cofactor biosynthetic process
CUC43_04920	COG0303	'Molybdopterin
CUC43_04930	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CUC43_04935	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CUC43_04960	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CUC43_04970	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CUC43_05025	COG2814	Major facilitator Superfamily
CUC43_05045	COG0490	domain, Protein
CUC43_05050	COG0582	viral genome integration into host DNA
CUC43_05060	COG1136	(ABC) transporter
CUC43_05085	COG1242	4 iron, 4 sulfur cluster binding
CUC43_05090	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CUC43_05095	COG1131	(ABC) transporter
CUC43_05105	COG1794	racemase activity, acting on amino acids and derivatives
CUC43_05130	COG2267	carboxylic ester hydrolase activity
CUC43_05135	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CUC43_05140	COG0671	phosphoesterase, PA-phosphatase related
CUC43_05145	COG0438	transferase activity, transferring glycosyl groups
CUC43_05155	COG0521	Mo-molybdopterin cofactor biosynthetic process
CUC43_05250	COG5002	protein histidine kinase activity
CUC43_05255	COG4191	Histidine kinase
CUC43_05260	COG2267	carboxylic ester hydrolase activity
CUC43_05265	COG1368	sulfuric ester hydrolase activity
CUC43_05280	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUC43_05285	COG1116	anion transmembrane transporter activity
CUC43_05290	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUC43_05305	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CUC43_05325	COG0494	nUDIX hydrolase
CUC43_05365	COG0288	reversible hydration of carbon dioxide
CUC43_05370	COG1271	oxidase subunit
CUC43_05375	COG1294	oxidase, subunit
CUC43_05405	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_05430	COG1842	Phage shock protein A
CUC43_05470	COG5002	protein histidine kinase activity
CUC43_05475	COG0745	RESPONSE REGULATOR receiver
CUC43_05505	COG1597	lipid kinase activity
CUC43_05535	COG1136	(ABC) transporter
CUC43_05570	COG0586	Pfam SNARE associated Golgi protein
CUC43_05600	COG0577	efflux transmembrane transporter activity
CUC43_05605	COG1136	(ABC) transporter
CUC43_05610	COG3708	Transcriptional regulator
CUC43_05610	COG2207	Transcriptional regulator
CUC43_05615	COG5658	integral membrane protein
CUC43_05620	COG0640	Transcriptional regulator
CUC43_05625	COG0745	RESPONSE REGULATOR receiver
CUC43_05630	COG2205	protein histidine kinase activity
CUC43_05635	COG0577	efflux transmembrane transporter activity
CUC43_05640	COG0577	efflux transmembrane transporter activity
CUC43_05645	COG1136	(ABC) transporter
CUC43_05650	COG0577	efflux transmembrane transporter activity
CUC43_05695	COG3964	amidohydrolase
CUC43_05715	COG4948	Mandelate Racemase Muconate Lactonizing
CUC43_05730	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CUC43_05735	COG0596	Alpha beta hydrolase
CUC43_05745	COG1169	isochorismate synthase
CUC43_05750	COG1575	Belongs to the MenA family. Type 1 subfamily
CUC43_05755	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CUC43_05760	COG1278	Cold shock
CUC43_05785	COG0058	SHG alpha-glucan phosphorylase activity
CUC43_05795	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CUC43_05815	COG1404	Belongs to the peptidase S8 family
CUC43_05830	COG1595	DNA-templated transcription, initiation
CUC43_05925	COG0544	peptidyl-prolyl cis-trans isomerase activity
CUC43_05960	COG1285	pathogenesis
CUC43_05965	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CUC43_05985	COG2155	Conserved Protein
CUC43_05990	COG1098	S1 RNA binding domain
CUC43_05995	COG0436	Aminotransferase
CUC43_06000	COG1522	sequence-specific DNA binding
CUC43_06005	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUC43_06010	COG2267	carboxylic ester hydrolase activity
CUC43_06020	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CUC43_06035	COG5018	Exonuclease
CUC43_06040	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CUC43_06060	COG0423	glycine-tRNA ligase activity
CUC43_06065	COG2050	protein possibly involved in aromatic compounds catabolism
CUC43_06075	COG1268	BioY protein
CUC43_06080	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CUC43_06085	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CUC43_06100	COG3584	3D domain protein
CUC43_06115	COG1252	NADH dehydrogenase
CUC43_06125	COG3708	Transcriptional regulator
CUC43_06145	COG1683	Conserved Protein
CUC43_06245	COG0740	serine-type endopeptidase activity
CUC43_06255	COG1802	Transcriptional regulator
CUC43_06255	COG4626	Terminase
CUC43_06370	COG1396	sequence-specific DNA binding
CUC43_06415	COG0316	Belongs to the HesB IscA family
CUC43_06430	COG1252	NADH dehydrogenase
CUC43_06445	COG0390	transport system, permease component
CUC43_06450	COG2824	Alkylphosphonate utilization operon protein PhnA
CUC43_06470	COG4837	Protein of unknown function (DUF1462)
CUC43_06475	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CUC43_06485	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CUC43_06490	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CUC43_06505	COG1136	(ABC) transporter
CUC43_06505	COG0577	efflux transmembrane transporter activity
CUC43_06520	COG2249	NAD(P)H dehydrogenase (quinone) activity
CUC43_06530	COG0647	UMP catabolic process
CUC43_06540	COG2445	Protein of unknown function DUF86
CUC43_06545	COG1494	fructose-1,6-bisphosphatase
CUC43_06565	COG4470	Protein conserved in bacteria
CUC43_06575	COG0789	Transcriptional regulator
CUC43_06580	COG4377	Putative membrane peptidase family (DUF2324)
CUC43_06605	COG0739	heme binding
CUC43_06615	COG3377	Domain of unknown function (DUF1805)
CUC43_06620	COG0737	Belongs to the 5'-nucleotidase family
CUC43_06630	COG1695	Transcriptional regulator
CUC43_06640	COG0719	Fe-S assembly protein
CUC43_06645	COG0822	iron-sulfur transferase activity
CUC43_06650	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CUC43_06655	COG0719	Fe-S assembly protein
CUC43_06660	COG0396	ATPase activity
CUC43_06665	COG1464	Belongs to the NlpA lipoprotein family
CUC43_06670	COG1464	Belongs to the NlpA lipoprotein family
CUC43_06675	COG2011	ABC-type metal ion transport system permease component
CUC43_06680	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CUC43_06690	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CUC43_06695	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CUC43_06705	COG1393	Belongs to the ArsC family
CUC43_06780	COG1309	transcriptional regulator
CUC43_06785	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_06795	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_06800	COG1960	acyl-CoA dehydrogenase activity
CUC43_06810	COG0183	Belongs to the thiolase family
CUC43_06815	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUC43_06815	COG1024	Enoyl-CoA hydratase
CUC43_06830	COG1686	Belongs to the peptidase S11 family
CUC43_06845	COG0011	TIGRFAM Protein of
CUC43_06850	COG0840	transmembrane signaling receptor activity
CUC43_06870	COG2814	Major facilitator Superfamily
CUC43_06875	COG0531	amino acid
CUC43_06900	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_06945	COG0586	Pfam SNARE associated Golgi protein
CUC43_06960	COG0745	RESPONSE REGULATOR receiver
CUC43_06965	COG5002	protein histidine kinase activity
CUC43_06990	COG0840	transmembrane signaling receptor activity
CUC43_06995	COG2151	metal-sulfur cluster biosynthetic enzyme
CUC43_07000	COG3227	Zinc metalloprotease (Elastase)
CUC43_07005	COG1741	Belongs to the pirin family
CUC43_07020	COG0586	Pfam SNARE associated Golgi protein
CUC43_07025	COG0475	glutathione-regulated potassium exporter activity
CUC43_07030	COG0490	domain, Protein
CUC43_07040	COG1115	amino acid carrier protein
CUC43_07045	COG0783	Belongs to the Dps family
CUC43_07060	COG1611	Belongs to the LOG family
CUC43_07070	COG1528	Iron-storage protein
CUC43_07080	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CUC43_07085	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CUC43_07090	COG1115	amino acid carrier protein
CUC43_07095	COG1115	amino acid carrier protein
CUC43_07100	COG2910	NAD(P)H-binding
CUC43_07120	COG0656	L-ascorbic acid biosynthetic process
CUC43_07125	COG2814	Major facilitator Superfamily
CUC43_07130	COG1733	regulation of RNA biosynthetic process
CUC43_07140	COG1252	NADH dehydrogenase
CUC43_07145	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CUC43_07160	COG0840	transmembrane signaling receptor activity
CUC43_07160	COG3290	protein histidine kinase activity
CUC43_07170	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CUC43_07190	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUC43_07195	COG3223	Belongs to the PsiE family
CUC43_07260	COG0557	exoribonuclease II activity
CUC43_07265	COG1647	Serine aminopeptidase, S33
CUC43_07270	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CUC43_07275	COG1346	cytolysis
CUC43_07310	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CUC43_07325	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CUC43_07335	COG1668	transmembrane transport
CUC43_07340	COG4152	abc transporter atp-binding protein
CUC43_07345	COG4585	Histidine kinase
CUC43_07375	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CUC43_07390	COG2323	membrane
CUC43_07410	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUC43_07420	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CUC43_07430	COG1051	belongs to the nudix hydrolase family
CUC43_07440	COG0492	ferredoxin-NADP+ reductase activity
CUC43_07445	COG0457	Tetratricopeptide repeat
CUC43_07450	COG0110	maltose O-acetyltransferase activity
CUC43_07470	COG1950	PFAM Membrane protein of
CUC43_07480	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CUC43_07500	COG0789	Transcriptional regulator
CUC43_07535	COG0583	DNA-binding transcription factor activity
CUC43_07545	COG0655	NAD(P)H dehydrogenase (quinone) activity
CUC43_07560	COG1132	(ABC) transporter
CUC43_07570	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUC43_07575	COG3409	Peptidoglycan-binding domain 1 protein
CUC43_07575	COG0793	Belongs to the peptidase S41A family
CUC43_07580	COG2177	Part of the ABC transporter FtsEX involved in
CUC43_07585	COG2884	Cell division ATP-binding protein ftsE
CUC43_07605	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CUC43_07610	COG1278	Cold shock
CUC43_07615	COG1040	competence protein
CUC43_07620	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CUC43_07625	COG0791	NLP P60 protein
CUC43_07625	COG1388	LysM domain
CUC43_07630	COG1733	regulation of RNA biosynthetic process
CUC43_07640	COG1307	EDD domain protein, DegV family
CUC43_07645	COG1739	Uncharacterized protein family UPF0029
CUC43_07650	COG1316	TRANSCRIPTIONal
CUC43_07655	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CUC43_07660	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CUC43_07665	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CUC43_07675	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CUC43_07675	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CUC43_07695	COG1486	melibiose metabolic process
CUC43_07700	COG1447	Phosphotransferase system cellobiose-specific component IIA
CUC43_07705	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CUC43_07725	COG1447	Phosphotransferase system cellobiose-specific component IIA
CUC43_07735	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CUC43_07740	COG1301	dicarboxylic acid transport
CUC43_07745	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_07760	COG0346	lactoylglutathione lyase activity
CUC43_07765	COG1511	domain protein
CUC43_07770	COG0583	DNA-binding transcription factor activity
CUC43_07775	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CUC43_07785	COG1271	oxidase subunit
CUC43_07790	COG1294	oxidase, subunit
CUC43_07795	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CUC43_07805	COG1620	l-lactate permease
CUC43_07815	COG2389	metal-binding protein
CUC43_07830	COG1368	sulfuric ester hydrolase activity
CUC43_07845	COG1388	LysM domain
CUC43_07845	COG0791	NLP P60 protein
CUC43_07850	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CUC43_07860	COG1215	transferase activity, transferring glycosyl groups
CUC43_07870	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CUC43_07880	COG3584	3D domain protein
CUC43_07880	COG1388	LysM domain
CUC43_07905	COG4715	Zinc finger, swim domain protein
CUC43_07910	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CUC43_07955	COG1191	sigma factor activity
CUC43_07970	COG0577	efflux transmembrane transporter activity
CUC43_07975	COG1136	(ABC) transporter
CUC43_08000	COG5002	protein histidine kinase activity
CUC43_08005	COG0745	RESPONSE REGULATOR receiver
CUC43_08010	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CUC43_08015	COG4464	protein tyrosine phosphatase activity
CUC43_08035	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CUC43_08040	COG1134	teichoic acid transport
CUC43_08045	COG1682	transport, permease protein
CUC43_08050	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CUC43_08090	COG1609	Transcriptional regulator
CUC43_08105	COG0739	heme binding
CUC43_08120	COG3279	Response regulator of the LytR AlgR family
CUC43_08125	COG0318	PFAM AMP-dependent synthetase and ligase
CUC43_08130	COG2385	sporulation resulting in formation of a cellular spore
CUC43_08135	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CUC43_08145	COG4836	Membrane
CUC43_08150	COG1007	ATP synthesis coupled electron transport
CUC43_08155	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUC43_08160	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CUC43_08170	COG0839	Belongs to the complex I subunit 6 family
CUC43_08190	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUC43_08205	COG3300	MHYT domain
CUC43_08205	COG5001	Diguanylate cyclase
CUC43_08255	COG0356	it plays a direct role in the translocation of protons across the membrane
CUC43_08290	COG0698	ribose 5-phosphate isomerase
CUC43_08305	COG2190	(PTS) system
CUC43_08310	COG2259	Doxx family
CUC43_08315	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUC43_08330	COG0009	L-threonylcarbamoyladenylate synthase
CUC43_08345	COG2890	protein-(glutamine-N5) methyltransferase activity
CUC43_08350	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CUC43_08370	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CUC43_08375	COG1494	fructose-1,6-bisphosphatase
CUC43_08385	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CUC43_08400	COG4821	SIS domain
CUC43_08410	COG3343	RNA polymerase activity
CUC43_08420	COG1960	acyl-CoA dehydrogenase activity
CUC43_08425	COG1960	acyl-CoA dehydrogenase activity
CUC43_08430	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUC43_08435	COG0183	Belongs to the thiolase family
CUC43_08440	COG0247	lactate metabolic process
CUC43_08440	COG2181	nitrate reductase activity
CUC43_08445	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CUC43_08455	COG3300	MHYT domain
CUC43_08455	COG5001	Diguanylate cyclase
CUC43_08480	COG2197	response regulator
CUC43_08485	COG4585	Histidine kinase
CUC43_08490	COG0842	Transport permease protein
CUC43_08495	COG1131	(ABC) transporter
CUC43_08500	COG0024	Methionine aminopeptidase
CUC43_08510	COG2234	aminopeptidase activity
CUC43_08540	COG4506	Protein conserved in bacteria
CUC43_08545	COG1619	proteins homologs of microcin C7 resistance protein MccF
CUC43_08565	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CUC43_08570	COG2814	Major facilitator Superfamily
CUC43_08575	COG0789	Transcriptional regulator
CUC43_08580	COG0584	glycerophosphoryl diester phosphodiesterase
CUC43_08585	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CUC43_08595	COG1994	Peptidase M50
CUC43_08605	COG1078	dGTPase activity
CUC43_08610	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUC43_08615	COG1120	ATPase activity
CUC43_08620	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_08625	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_08645	COG0095	Lipoate-protein ligase
CUC43_08650	COG0280	phosphate acetyltransferase
CUC43_08665	COG3773	Cell wall hydrolase
CUC43_08675	COG2363	Small membrane protein
CUC43_08685	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CUC43_08690	COG2233	PERMEase
CUC43_08695	COG0561	phosphatase activity
CUC43_08700	COG2814	Major facilitator Superfamily
CUC43_08710	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CUC43_08715	COG1131	(ABC) transporter
CUC43_08720	COG2755	lipolytic protein G-D-S-L family
CUC43_08725	COG1609	Transcriptional regulator
CUC43_08735	COG0460	homoserine dehydrogenase
CUC43_08755	COG1011	Hydrolase
CUC43_08775	COG2197	response regulator
CUC43_08780	COG4585	Histidine kinase
CUC43_08780	COG2203	Gaf domain
CUC43_08785	COG0351	phosphomethylpyrimidine kinase
CUC43_08790	COG3706	GGDEF domain
CUC43_08795	COG2879	small protein
CUC43_08815	COG3279	Response regulator of the LytR AlgR family
CUC43_08820	COG0477	Major facilitator Superfamily
CUC43_08845	COG0840	transmembrane signaling receptor activity
CUC43_08855	COG1607	acyl-coa hydrolase
CUC43_08875	COG0488	(ABC) transporter
CUC43_08900	COG0463	Glycosyl transferase, family 2
CUC43_08905	COG1309	transcriptional regulator
CUC43_08910	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CUC43_08915	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CUC43_08915	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CUC43_08920	COG0628	permease
CUC43_08935	COG3279	Response regulator of the LytR AlgR family
CUC43_08940	COG3275	phosphorelay sensor kinase activity
CUC43_08945	COG2814	Major facilitator Superfamily
CUC43_08950	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CUC43_08955	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CUC43_08965	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CUC43_08985	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CUC43_08990	COG1272	protein, Hemolysin III
CUC43_09020	COG1164	Oligoendopeptidase f
CUC43_09045	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUC43_09050	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CUC43_09055	COG4853	Protein conserved in bacteria
CUC43_09060	COG4863	YycH protein
CUC43_09065	COG5002	protein histidine kinase activity
CUC43_09070	COG0745	RESPONSE REGULATOR receiver
CUC43_09100	COG0305	Participates in initiation and elongation during chromosome replication
CUC43_09110	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CUC43_09115	COG4241	membrane
CUC43_09125	COG0629	single-stranded DNA binding
CUC43_09135	COG0012	GTP binding
CUC43_09140	COG4481	Protein conserved in bacteria
CUC43_09145	COG0668	transmembrane transport
CUC43_09155	COG1475	DNA binding
CUC43_09160	COG1192	Involved in chromosome partitioning
CUC43_09185	COG1847	R3H domain protein
CUC43_09190	COG0706	membrane insertase activity
CUC43_09210	COG0592	DNA-directed DNA polymerase activity
CUC43_09215	COG2501	S4 domain
CUC43_09225	COG0187	DNA topoisomerase II activity
CUC43_09230	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CUC43_09265	COG0516	GMP reductase activity
CUC43_09265	COG0517	IMP dehydrogenase activity
CUC43_09270	COG1686	Belongs to the peptidase S11 family
CUC43_09300	COG1428	Deoxynucleoside kinase
CUC43_09305	COG1428	Deoxynucleoside kinase
CUC43_09310	COG1335	isochorismatase
CUC43_09320	COG0590	tRNA wobble adenosine to inosine editing
CUC43_09330	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CUC43_09385	COG1982	Orn Lys Arg decarboxylase major
CUC43_09395	COG0470	DNA polymerase III
CUC43_09400	COG1774	PSP1 C-terminal conserved region
CUC43_09410	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CUC43_09420	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CUC43_09425	COG2002	toxin-antitoxin pair type II binding
CUC43_09435	COG0084	hydrolase, TatD family'
CUC43_09440	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CUC43_09455	COG4466	Protein conserved in bacteria
CUC43_09470	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CUC43_09480	COG0251	oxidation-reduction process
CUC43_09495	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CUC43_09510	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CUC43_09515	COG2002	toxin-antitoxin pair type II binding
CUC43_09520	COG2244	polysaccharide biosynthetic process
CUC43_09525	COG3956	TIGRFAM MazG family protein
CUC43_09530	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CUC43_09550	COG1098	S1 RNA binding domain
CUC43_09565	COG2208	phosphoserine phosphatase activity
CUC43_09580	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CUC43_09595	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CUC43_09600	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CUC43_09605	COG0512	Glutamine amidotransferase of anthranilate synthase
CUC43_09610	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CUC43_09615	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CUC43_09620	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CUC43_09625	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CUC43_09630	COG1396	sequence-specific DNA binding
CUC43_09635	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CUC43_09725	COG3880	PFAM UvrB UvrC protein
CUC43_09735	COG0542	response to heat
CUC43_09740	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CUC43_09750	COG4956	integral membrane protein (PIN domain superfamily)
CUC43_09770	COG1045	serine acetyltransferase
CUC43_09785	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CUC43_09790	COG3688	RNA-binding protein containing a PIN domain
CUC43_09800	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CUC43_09805	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CUC43_09810	COG0250	Participates in transcription elongation, termination and antitermination
CUC43_09835	COG2813	Specifically methylates the guanine in position
CUC43_09850	COG1358	cellular component organization or biogenesis
CUC43_09960	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CUC43_09985	COG0201	protein transport
CUC43_09995	COG0024	Methionine aminopeptidase
CUC43_10005	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CUC43_10040	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CUC43_10065	COG0860	N-Acetylmuramoyl-L-alanine amidase
CUC43_10070	COG0489	protein tyrosine kinase activity
CUC43_10080	COG2194	sulfuric ester hydrolase activity
CUC43_10085	COG0726	polysaccharide deacetylase
CUC43_10170	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CUC43_10175	COG4856	YbbR-like protein
CUC43_10195	COG0596	Alpha beta hydrolase
CUC43_10215	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CUC43_10250	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_10255	COG2011	ABC-type metal ion transport system permease component
CUC43_10260	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CUC43_10265	COG1464	Belongs to the NlpA lipoprotein family
CUC43_10280	COG0277	FAD linked oxidase domain protein
CUC43_10295	COG2814	Major facilitator Superfamily
CUC43_10310	COG0601	transmembrane transport
CUC43_10315	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUC43_10320	COG0444	Belongs to the ABC transporter superfamily
CUC43_10325	COG4608	Belongs to the ABC transporter superfamily
CUC43_10330	COG4166	transmembrane transport
CUC43_10345	COG4166	transmembrane transport
CUC43_10350	COG4166	transmembrane transport
CUC43_10355	COG0656	L-ascorbic acid biosynthetic process
CUC43_10360	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CUC43_10390	COG4149	molybdate abc transporter
CUC43_10395	COG0725	ABC transporter, periplasmic molybdate-binding protein
CUC43_10400	COG1910	domain protein
CUC43_10420	COG0697	spore germination
CUC43_10440	COG0204	Acyl-transferase
CUC43_10450	COG1609	Transcriptional regulator
CUC43_10460	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_10475	COG0084	hydrolase, TatD family'
CUC43_10485	COG5298	Protein conserved in bacteria
CUC43_10510	COG0488	(ABC) transporter
CUC43_10515	COG4585	Histidine kinase
CUC43_10520	COG2197	response regulator
CUC43_10525	COG1131	(ABC) transporter
CUC43_10530	COG0842	Transport permease protein
CUC43_10530	COG1511	domain protein
CUC43_10535	COG0842	Transport permease protein
CUC43_10550	COG0747	negative chemotaxis
CUC43_10555	COG0601	transmembrane transport
CUC43_10565	COG0444	Belongs to the ABC transporter superfamily
CUC43_10570	COG4608	Belongs to the ABC transporter superfamily
CUC43_10575	COG0561	phosphatase activity
CUC43_10615	COG0179	Fumarylacetoacetate (FAA) hydrolase
CUC43_10630	COG0531	amino acid
CUC43_10635	COG2814	Major facilitator Superfamily
CUC43_10645	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CUC43_10655	COG4294	response to UV
CUC43_10660	COG0705	Rhomboid family
CUC43_10670	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CUC43_10675	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CUC43_10680	COG0864	Transcriptional regulator
CUC43_10685	COG2337	Toxic component of a toxin-antitoxin (TA) module
CUC43_10690	COG2183	response to ionizing radiation
CUC43_10785	COG0802	atpase or kinase
CUC43_10790	COG1214	PFAM Peptidase M22, glycoprotease
CUC43_10795	COG0456	acetyltransferase
CUC43_10805	COG0488	(ABC) transporter
CUC43_10820	COG1266	CAAX protease self-immunity
CUC43_10830	COG0459	protein refolding
CUC43_10850	COG2252	PERMEase
CUC43_10860	COG5002	protein histidine kinase activity
CUC43_10885	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CUC43_10915	COG2226	methyltransferase
CUC43_10945	COG1215	transferase activity, transferring glycosyl groups
CUC43_10980	COG2205	protein histidine kinase activity
CUC43_10985	COG0745	RESPONSE REGULATOR receiver
CUC43_11005	COG0697	spore germination
CUC43_11030	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CUC43_11035	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CUC43_11040	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CUC43_11050	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CUC43_11065	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CUC43_11075	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CUC43_11085	COG0151	Belongs to the GarS family
CUC43_11115	COG0210	DNA helicase
CUC43_11125	COG4851	CamS sex pheromone cAM373 precursor
CUC43_11145	COG1335	isochorismatase
CUC43_11160	COG2011	ABC-type metal ion transport system permease component
CUC43_11165	COG1464	Belongs to the NlpA lipoprotein family
CUC43_11190	COG0003	Pfam Anion-transporting ATPase
CUC43_11195	COG1846	Transcriptional regulator
CUC43_11200	COG4682	membrane
CUC43_11220	COG1597	lipid kinase activity
CUC43_11225	COG0546	phosphoglycolate phosphatase activity
CUC43_11230	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CUC43_11240	COG1012	belongs to the aldehyde dehydrogenase family
CUC43_11245	COG2076	Multidrug Resistance protein
CUC43_11250	COG2309	aminopeptidase activity
CUC43_11280	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CUC43_11285	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CUC43_11290	COG0582	viral genome integration into host DNA
CUC43_11300	COG1396	sequence-specific DNA binding
CUC43_11310	COG1396	sequence-specific DNA binding
CUC43_11355	COG2002	toxin-antitoxin pair type II binding
CUC43_11440	COG0582	viral genome integration into host DNA
CUC43_11445	COG1674	ftsk spoiiie
CUC43_11445	COG4980	gas vesicle protein
CUC43_11480	COG4626	Terminase
CUC43_11480	COG1802	Transcriptional regulator
CUC43_11490	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_11560	COG4824	toxin secretion phage lysis holin
CUC43_11565	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_11585	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CUC43_11595	COG3852	Histidine kinase
CUC43_11600	COG4807	Protein conserved in bacteria
CUC43_11640	COG1473	amidohydrolase
CUC43_11660	COG0450	alkyl hydroperoxide reductase
CUC43_11665	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
CUC43_11675	COG0235	Class ii aldolase
CUC43_11680	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_11685	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_11690	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUC43_11715	COG0166	Belongs to the GPI family
CUC43_11765	COG3541	Predicted nucleotidyltransferase
CUC43_11770	COG2814	Major facilitator Superfamily
CUC43_11780	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUC43_11780	COG0723	plastoquinol--plastocyanin reductase activity
CUC43_11790	COG0765	amino acid transport
CUC43_11795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUC43_11805	COG0840	transmembrane signaling receptor activity
CUC43_11810	COG0277	FAD linked oxidase domain protein
CUC43_11815	COG0366	Alpha amylase catalytic
CUC43_11820	COG2190	(PTS) system
CUC43_11820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CUC43_11820	COG1263	PTS System
CUC43_11855	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CUC43_11870	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUC43_11880	COG1116	anion transmembrane transporter activity
CUC43_11950	COG2270	Major facilitator Superfamily
CUC43_11980	COG2310	stress, protein
CUC43_11985	COG2310	stress, protein
CUC43_11990	COG2310	stress, protein
CUC43_11995	COG0861	Integral membrane protein TerC family
CUC43_12005	COG3853	Toxic anion resistance protein (TelA)
CUC43_12020	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CUC43_12030	COG1295	ribonuclease BN
CUC43_12040	COG2217	Heavy metal translocating P-type atpase
CUC43_12045	COG0697	spore germination
CUC43_12055	COG0681	Belongs to the peptidase S26 family
CUC43_12065	COG0586	Pfam SNARE associated Golgi protein
CUC43_12080	COG3871	stress protein (general stress protein 26)
CUC43_12085	COG0387	Pfam Sodium calcium exchanger
CUC43_12095	COG0535	radical SAM domain protein
CUC43_12115	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CUC43_12135	COG3829	transcription factor binding
CUC43_12145	COG0833	amino acid
CUC43_12150	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUC43_12180	COG2066	Belongs to the glutaminase family
CUC43_12190	COG1263	PTS System
CUC43_12190	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CUC43_12195	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CUC43_12215	COG0463	Glycosyl transferase, family 2
CUC43_12225	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CUC43_12225	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUC43_12240	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CUC43_12260	COG0402	S-adenosylhomocysteine deaminase activity
CUC43_12265	COG1090	epimerase
CUC43_12270	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_12300	COG1988	membrane-bound metal-dependent
CUC43_12305	COG1194	a g-specific adenine glycosylase
CUC43_12330	COG1132	(ABC) transporter
CUC43_12335	COG4129	membrane
CUC43_12340	COG0067	glutamate synthase
CUC43_12340	COG0069	glutamate synthase activity
CUC43_12340	COG0070	glutamate synthase
CUC43_12350	COG4555	ABC transporter
CUC43_12370	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CUC43_12375	COG0735	belongs to the Fur family
CUC43_12480	COG4974	Belongs to the 'phage' integrase family
CUC43_12490	COG0322	excinuclease ABC activity
CUC43_12590	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CUC43_12595	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CUC43_12620	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CUC43_12630	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CUC43_12645	COG2766	serine protein kinase
CUC43_12670	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CUC43_12680	COG1585	Membrane protein implicated in regulation of membrane protease activity
CUC43_12685	COG2268	Band 7 protein
CUC43_12695	COG3290	protein histidine kinase activity
CUC43_12700	COG4565	transcriptional regulatory protein
CUC43_12705	COG2851	Citrate transporter
CUC43_12730	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CUC43_12735	COG3842	ATPase activity
CUC43_12740	COG1175	transmembrane transport
CUC43_12745	COG0395	ABC-type sugar transport system, permease component
CUC43_12770	COG0745	RESPONSE REGULATOR receiver
CUC43_12775	COG5002	protein histidine kinase activity
CUC43_12785	COG4990	cell redox homeostasis
CUC43_12795	COG3290	protein histidine kinase activity
CUC43_12800	COG4565	transcriptional regulatory protein
CUC43_12805	COG3493	citrate carrier protein
CUC43_12810	COG0281	malic enzyme
CUC43_12820	COG0697	spore germination
CUC43_12825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUC43_12835	COG5002	protein histidine kinase activity
CUC43_12840	COG0745	RESPONSE REGULATOR receiver
CUC43_12850	COG0456	acetyltransferase
CUC43_12850	COG0454	-acetyltransferase
CUC43_12855	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CUC43_12860	COG3383	formate dehydrogenase (NAD+) activity
CUC43_12865	COG2427	Protein of unknown function (DUF1641)
CUC43_12880	COG0531	amino acid
CUC43_12885	COG0640	Transcriptional regulator
CUC43_12890	COG2217	Heavy metal translocating P-type atpase
CUC43_12895	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CUC43_12905	COG3227	Zinc metalloprotease (Elastase)
CUC43_12925	COG2720	vancomycin resistance protein
CUC43_12930	COG1316	TRANSCRIPTIONal
CUC43_12935	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CUC43_12940	COG0346	lactoylglutathione lyase activity
CUC43_12945	COG1253	flavin adenine dinucleotide binding
CUC43_12950	COG1027	Aspartate ammonia-lyase
CUC43_12955	COG1620	l-lactate permease
CUC43_12975	COG3104	oligopeptide transport
CUC43_12980	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUC43_12985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_12990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_13000	COG2226	methyltransferase
CUC43_13005	COG0156	8-amino-7-oxononanoate synthase activity
CUC43_13010	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUC43_13015	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CUC43_13025	COG4548	von Willebrand factor, type A
CUC43_13030	COG0714	Associated with various cellular activities
CUC43_13035	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CUC43_13055	COG0531	amino acid
CUC43_13060	COG2188	Transcriptional regulator
CUC43_13065	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CUC43_13065	COG1263	PTS System
CUC43_13070	COG0366	Alpha amylase catalytic
CUC43_13085	COG0697	spore germination
CUC43_13090	COG4585	Histidine kinase
CUC43_13095	COG2197	response regulator
CUC43_13125	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CUC43_13130	COG1115	amino acid carrier protein
CUC43_13140	COG1126	abc transporter atp-binding protein
CUC43_13145	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUC43_13150	COG0765	amino acid transport
CUC43_13155	COG0765	amino acid transport
CUC43_13160	COG0833	amino acid
CUC43_13175	COG1595	DNA-templated transcription, initiation
CUC43_13190	COG2378	regulation of single-species biofilm formation
CUC43_13195	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CUC43_13200	COG5002	protein histidine kinase activity
CUC43_13215	COG0659	secondary active sulfate transmembrane transporter activity
CUC43_13230	COG0747	negative chemotaxis
CUC43_13240	COG0601	transmembrane transport
CUC43_13245	COG4608	Belongs to the ABC transporter superfamily
CUC43_13255	COG2271	Major facilitator Superfamily
CUC43_13260	COG1846	Transcriptional regulator
CUC43_13265	COG0477	Major facilitator Superfamily
CUC43_13270	COG1609	Transcriptional regulator
CUC43_13275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUC43_13285	COG1129	ABC transporter
CUC43_13290	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUC43_13295	COG1879	ABC-type sugar transport system periplasmic component
CUC43_13300	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CUC43_13325	COG1063	alcohol dehydrogenase
CUC43_13340	COG3568	Endonuclease Exonuclease Phosphatase
CUC43_13370	COG0840	transmembrane signaling receptor activity
CUC43_13375	COG3584	3D domain protein
CUC43_13375	COG1388	LysM domain
CUC43_13380	COG1476	TRANSCRIPTIONal
CUC43_13400	COG3104	oligopeptide transport
CUC43_13405	COG1114	Component of the transport system for branched-chain amino acids
CUC43_13410	COG1464	Belongs to the NlpA lipoprotein family
CUC43_13415	COG1960	acyl-CoA dehydrogenase activity
CUC43_13420	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CUC43_13425	COG2011	ABC-type metal ion transport system permease component
CUC43_13440	COG1113	amino acid transport
CUC43_13445	COG2252	PERMEase
CUC43_13460	COG2153	protein acetylation
CUC43_13470	COG0569	domain protein
CUC43_13470	COG0475	glutathione-regulated potassium exporter activity
CUC43_13485	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CUC43_13490	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CUC43_13495	COG0833	amino acid
CUC43_13500	COG4990	cell redox homeostasis
CUC43_13515	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CUC43_13520	COG0697	spore germination
CUC43_13525	COG0531	amino acid
CUC43_13540	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CUC43_13545	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CUC43_13550	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CUC43_13550	COG1918	ferrous iron import across plasma membrane
CUC43_13555	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CUC43_13560	COG0573	inorganic phosphate transmembrane transporter activity
CUC43_13565	COG0581	inorganic phosphate transmembrane transporter activity
CUC43_13575	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CUC43_13700	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CUC43_13735	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CUC43_13740	COG1116	anion transmembrane transporter activity
CUC43_13745	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUC43_13750	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUC43_13755	COG0352	thiamine-phosphate diphosphorylase activity
CUC43_13760	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUC43_13765	COG2104	thiamine diphosphate biosynthetic process
CUC43_13775	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CUC43_13780	COG0351	phosphomethylpyrimidine kinase
CUC43_13825	COG2205	protein histidine kinase activity
CUC43_13830	COG2814	Major facilitator Superfamily
CUC43_13835	COG1846	Transcriptional regulator
CUC43_13850	COG2252	PERMEase
CUC43_13855	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_13875	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CUC43_13880	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CUC43_13915	COG0778	Nitroreductase
CUC43_13920	COG2719	SpoVR family
CUC43_13930	COG3591	Belongs to the peptidase S1B family
CUC43_13955	COG0446	pyridine nucleotide-disulphide oxidoreductase
CUC43_13960	COG1937	Protein conserved in bacteria
CUC43_13965	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CUC43_13965	COG0425	Belongs to the sulfur carrier protein TusA family
CUC43_13970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_13970	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CUC43_13975	COG0425	Belongs to the sulfur carrier protein TusA family
CUC43_13980	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CUC43_13980	COG0425	Belongs to the sulfur carrier protein TusA family
CUC43_13990	COG2210	Belongs to the sulfur carrier protein TusA family
CUC43_13995	COG0730	response to heat
CUC43_14005	COG1316	TRANSCRIPTIONal
CUC43_14010	COG0604	alcohol dehydrogenase
CUC43_14015	COG1283	sodium-dependent phosphate transmembrane transporter activity
CUC43_14020	COG2814	Major facilitator Superfamily
CUC43_14035	COG3711	transcriptional antiterminator
CUC43_14035	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUC43_14040	COG1447	Phosphotransferase system cellobiose-specific component IIA
CUC43_14045	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CUC43_14050	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CUC43_14065	COG3584	3D domain protein
CUC43_14065	COG1388	LysM domain
CUC43_14070	COG0577	efflux transmembrane transporter activity
CUC43_14075	COG1136	(ABC) transporter
CUC43_14100	COG1114	Component of the transport system for branched-chain amino acids
CUC43_14105	COG3546	catalase activity
CUC43_14140	COG0586	Pfam SNARE associated Golgi protein
CUC43_14165	COG0531	amino acid
CUC43_14170	COG0475	glutathione-regulated potassium exporter activity
CUC43_14180	COG1737	Transcriptional regulator
CUC43_14190	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CUC43_14190	COG1263	PTS System
CUC43_14200	COG2259	Doxx family
CUC43_14220	COG1522	sequence-specific DNA binding
CUC43_14230	COG2076	Multidrug Resistance protein
CUC43_14240	COG1309	transcriptional regulator
CUC43_14245	COG2814	Major facilitator Superfamily
CUC43_14250	COG1733	regulation of RNA biosynthetic process
CUC43_14260	COG2249	NAD(P)H dehydrogenase (quinone) activity
CUC43_14280	COG2211	Major facilitator Superfamily
CUC43_14290	COG0693	protein deglycase activity
CUC43_14305	COG0531	amino acid
CUC43_14310	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CUC43_14320	COG1012	belongs to the aldehyde dehydrogenase family
CUC43_14340	COG1132	(ABC) transporter
CUC43_14345	COG1132	(ABC) transporter
CUC43_14355	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUC43_14360	COG0765	amino acid transport
CUC43_14365	COG1126	abc transporter atp-binding protein
CUC43_14380	COG0189	ligase activity
CUC43_14410	COG0028	Belongs to the TPP enzyme family
CUC43_14415	COG3527	Alpha-acetolactate decarboxylase
CUC43_14425	COG0561	phosphatase activity
CUC43_14435	COG3409	Peptidoglycan-binding domain 1 protein
CUC43_14435	COG5632	N-Acetylmuramoyl-L-alanine amidase
CUC43_14445	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CUC43_14470	COG0659	secondary active sulfate transmembrane transporter activity
CUC43_14505	COG2244	polysaccharide biosynthetic process
CUC43_14535	COG1024	Enoyl-CoA hydratase
CUC43_14555	COG1363	Peptidase, m42
CUC43_14610	COG0305	Participates in initiation and elongation during chromosome replication
CUC43_14640	COG3409	Peptidoglycan-binding domain 1 protein
CUC43_14660	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_14675	COG5632	N-Acetylmuramoyl-L-alanine amidase
CUC43_14695	COG1396	sequence-specific DNA binding
CUC43_14700	COG3409	Peptidoglycan-binding domain 1 protein
CUC43_14720	COG0477	Major facilitator Superfamily
CUC43_14725	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_14735	COG3290	protein histidine kinase activity
CUC43_14740	COG4565	transcriptional regulatory protein
CUC43_14745	COG3181	Tripartite tricarboxylate transporter family receptor
CUC43_14790	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CUC43_14800	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CUC43_14840	COG0305	Participates in initiation and elongation during chromosome replication
CUC43_14870	COG1160	GTP binding
CUC43_14895	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CUC43_14900	COG1288	antiporter activity
CUC43_14915	COG0477	Major facilitator Superfamily
CUC43_15015	COG1183	phosphatidylcholine synthase activity
CUC43_15040	COG2376	Dihydroxyacetone kinase
CUC43_15055	COG2376	Dihydroxyacetone kinase
CUC43_15070	COG1959	2 iron, 2 sulfur cluster binding
CUC43_15105	COG2770	Histidine kinase
CUC43_15105	COG3437	response regulator, receiver
CUC43_15130	COG0860	N-Acetylmuramoyl-L-alanine amidase
CUC43_15175	COG1136	(ABC) transporter
CUC43_15180	COG0577	efflux transmembrane transporter activity
CUC43_15185	COG0596	Alpha beta hydrolase
CUC43_15205	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_15215	COG3237	CsbD-like
CUC43_15240	COG1191	sigma factor activity
CUC43_15250	COG2208	phosphoserine phosphatase activity
CUC43_15255	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CUC43_15260	COG0784	Response regulator, receiver
CUC43_15260	COG2205	protein histidine kinase activity
CUC43_15260	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUC43_15260	COG2198	Histidine kinase
CUC43_15285	COG0393	Putative heavy-metal-binding
CUC43_15335	COG0420	3'-5' exonuclease activity
CUC43_15340	COG4717	serine-type aminopeptidase activity
CUC43_15405	COG0346	lactoylglutathione lyase activity
CUC43_15410	COG0346	lactoylglutathione lyase activity
CUC43_15415	COG0457	Tetratricopeptide repeat
CUC43_15425	COG2267	carboxylic ester hydrolase activity
CUC43_15455	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CUC43_15460	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CUC43_15470	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CUC43_15515	COG0477	Major facilitator Superfamily
CUC43_15520	COG0477	Major facilitator Superfamily
CUC43_15530	COG1033	growth of symbiont in host cell
CUC43_15530	COG2409	Drug exporters of the RND superfamily
CUC43_15585	COG4980	gas vesicle protein
CUC43_15590	COG0537	adenosine 5'-monophosphoramidase activity
CUC43_15600	COG1131	(ABC) transporter
CUC43_15605	COG4473	ABC transporter
CUC43_15635	COG1309	transcriptional regulator
CUC43_15645	COG3402	PFAM membrane-flanked domain
CUC43_15650	COG3428	Bacterial PH domain
CUC43_15695	COG3402	PFAM membrane-flanked domain
CUC43_15700	COG3428	Bacterial PH domain
CUC43_15705	COG2329	Antibiotic biosynthesis monooxygenase
CUC43_15710	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CUC43_15750	COG1309	transcriptional regulator
CUC43_15755	COG1511	domain protein
CUC43_15775	COG2318	DinB family
CUC43_15780	COG2378	regulation of single-species biofilm formation
CUC43_15790	COG1609	Transcriptional regulator
CUC43_15800	COG1234	tRNA 3'-trailer cleavage
CUC43_15805	COG0095	Lipoate-protein ligase
CUC43_15815	COG0318	PFAM AMP-dependent synthetase and ligase
CUC43_15825	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_15870	COG1073	alpha beta
CUC43_15875	COG1408	metallophosphoesterase
CUC43_15885	COG1078	dGTPase activity
CUC43_15915	COG1595	DNA-templated transcription, initiation
CUC43_15920	COG2207	Transcriptional regulator
CUC43_15920	COG3708	Transcriptional regulator
CUC43_15925	COG2205	protein histidine kinase activity
CUC43_15930	COG0745	RESPONSE REGULATOR receiver
CUC43_15955	COG0501	Belongs to the peptidase M48B family
CUC43_15960	COG0697	spore germination
CUC43_15975	COG0497	DNA recombination
CUC43_15980	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CUC43_15985	COG2224	Isocitrate lyase
CUC43_15995	COG1278	Cold shock
CUC43_16015	COG4903	ComK protein
CUC43_16025	COG0398	Pfam SNARE associated Golgi protein
CUC43_16085	COG0179	Fumarylacetoacetate (FAA) hydrolase
CUC43_16110	COG0367	asparagine synthase
CUC43_16120	COG0753	catalase activity
CUC43_16125	COG0004	ammonium transporteR
CUC43_16165	COG2996	Protein conserved in bacteria
CUC43_16170	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CUC43_16180	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_16195	COG0561	phosphatase activity
CUC43_16210	COG0542	response to heat
CUC43_16220	COG2267	carboxylic ester hydrolase activity
CUC43_16240	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CUC43_16245	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CUC43_16250	COG5504	Zn-dependent protease
CUC43_16260	COG0180	Tryptophanyl-tRNA synthetase
CUC43_16275	COG4166	transmembrane transport
CUC43_16280	COG0601	transmembrane transport
CUC43_16285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUC43_16290	COG0444	Belongs to the ABC transporter superfamily
CUC43_16295	COG4608	Belongs to the ABC transporter superfamily
CUC43_16300	COG0534	Mate efflux family protein
CUC43_16320	COG1393	Belongs to the ArsC family
CUC43_16325	COG0861	Integral membrane protein TerC family
CUC43_16330	COG4862	establishment of competence for transformation
CUC43_16335	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CUC43_16345	COG1164	Oligoendopeptidase f
CUC43_16360	COG2346	COG2346, Truncated hemoglobins
CUC43_16365	COG4116	CYTH
CUC43_16375	COG2357	RelA SpoT domain protein
CUC43_16385	COG0564	pseudouridine synthase activity
CUC43_16400	COG0772	Belongs to the SEDS family
CUC43_16405	COG1216	Glycosyl transferase, family 2
CUC43_16425	COG0463	Glycosyl transferase, family 2
CUC43_16425	COG0457	Tetratricopeptide repeat
CUC43_16445	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CUC43_16460	COG1091	dTDP-4-dehydrorhamnose reductase activity
CUC43_16505	COG2153	protein acetylation
CUC43_16515	COG2382	esterase
CUC43_16530	COG5492	domain, Protein
CUC43_16535	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CUC43_16550	COG0512	Glutamine amidotransferase of anthranilate synthase
CUC43_16550	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CUC43_16585	COG1620	l-lactate permease
CUC43_16590	COG5634	Uncharacterized conserved protein (DUF2278)
CUC43_16645	COG2226	methyltransferase
CUC43_16665	COG0508	dehydrogenase complex catalyzes the overall conversion of
CUC43_16675	COG1476	TRANSCRIPTIONal
CUC43_16815	COG2226	methyltransferase
CUC43_16830	COG1686	Belongs to the peptidase S11 family
CUC43_16835	COG0681	Belongs to the peptidase S26 family
CUC43_16870	COG1012	belongs to the aldehyde dehydrogenase family
CUC43_16880	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUC43_16885	COG1177	transmembrane transport
CUC43_16890	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CUC43_16900	COG2409	Drug exporters of the RND superfamily
CUC43_16910	COG0564	pseudouridine synthase activity
CUC43_16920	COG2340	Cysteine-rich secretory protein family
CUC43_16925	COG0247	lactate metabolic process
CUC43_16930	COG0277	FAD linked oxidase domain protein
CUC43_16935	COG3835	regulator
CUC43_16945	COG0745	RESPONSE REGULATOR receiver
CUC43_16950	COG5002	protein histidine kinase activity
CUC43_16955	COG2186	Transcriptional regulator
CUC43_16975	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CUC43_16985	COG2116	formate transmembrane transporter activity
CUC43_16990	COG0861	Integral membrane protein TerC family
CUC43_16995	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CUC43_17005	COG2030	dehydratase
CUC43_17025	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_17030	COG3243	poly(R)-hydroxyalkanoic acid synthase
CUC43_17040	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CUC43_17060	COG1840	ABC-type Fe3 transport system, periplasmic component
CUC43_17065	COG3842	ATPase activity
CUC43_17090	COG1349	DNA-binding transcription factor activity
CUC43_17105	COG0235	Class ii aldolase
CUC43_17115	COG2861	carbohydrate metabolic process
CUC43_17125	COG3852	Histidine kinase
CUC43_17130	COG1846	Transcriptional regulator
CUC43_17140	COG2318	DinB family
CUC43_17150	COG5002	protein histidine kinase activity
CUC43_17160	COG0720	synthase
CUC43_17175	COG4873	Protein conserved in bacteria
CUC43_17210	COG1780	Probably involved in ribonucleotide reductase function
CUC43_17225	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CUC43_17230	COG1725	Transcriptional regulator
CUC43_17235	COG1131	(ABC) transporter
CUC43_17245	COG1131	(ABC) transporter
CUC43_17250	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CUC43_17255	COG1266	CAAX protease self-immunity
CUC43_17265	COG1522	sequence-specific DNA binding
CUC43_17275	COG1335	isochorismatase
CUC43_17285	COG1619	proteins homologs of microcin C7 resistance protein MccF
CUC43_17290	COG2070	2-Nitropropane dioxygenase
CUC43_17295	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CUC43_17305	COG1696	Membrane protein involved in D-alanine export
CUC43_17330	COG0716	FMN binding
CUC43_17370	COG0534	Mate efflux family protein
CUC43_17390	COG1846	Transcriptional regulator
CUC43_17400	COG1301	dicarboxylic acid transport
CUC43_17410	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CUC43_17415	COG4709	membrane
CUC43_17420	COG3874	Sporulation protein YtfJ
CUC43_17450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CUC43_17455	COG0028	Belongs to the TPP enzyme family
CUC43_17460	COG0440	acetolactate synthase activity
CUC43_17535	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CUC43_17550	COG1183	phosphatidylcholine synthase activity
CUC43_17555	COG1368	sulfuric ester hydrolase activity
CUC43_17560	COG0582	viral genome integration into host DNA
CUC43_17575	COG1396	sequence-specific DNA binding
CUC43_17585	COG3646	Phage regulatory protein
CUC43_17585	COG3645	SOS response
CUC43_17680	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_17700	COG0582	viral genome integration into host DNA
CUC43_17705	COG1674	ftsk spoiiie
CUC43_17705	COG4980	gas vesicle protein
CUC43_17740	COG4626	Terminase
CUC43_17740	COG1802	Transcriptional regulator
CUC43_17750	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_17755	COG0740	serine-type endopeptidase activity
CUC43_17820	COG3344	reverse transcriptase
CUC43_17825	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CUC43_17825	COG0551	DNA topoisomerase type I activity
CUC43_17840	COG2002	toxin-antitoxin pair type II binding
CUC43_17845	COG1923	regulation of RNA biosynthetic process
CUC43_17875	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CUC43_17880	COG5433	transposase activity
CUC43_17980	COG0019	diaminopimelate decarboxylase activity
CUC43_18000	COG0529	Catalyzes the synthesis of activated sulfate
CUC43_18005	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CUC43_18025	COG1648	precorrin-2 dehydrogenase activity
CUC43_18035	COG0733	neurotransmitter:sodium symporter activity
CUC43_18055	COG1757	Na H antiporter
CUC43_18070	COG4758	membrane
CUC43_18075	COG4585	Histidine kinase
CUC43_18080	COG2197	response regulator
CUC43_18090	COG1114	Component of the transport system for branched-chain amino acids
CUC43_18100	COG2226	methyltransferase
CUC43_18145	COG0730	response to heat
CUC43_18150	COG0306	phosphate transporter
CUC43_18155	COG1392	Phosphate transport regulator
CUC43_18160	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CUC43_18175	COG3852	Histidine kinase
CUC43_18180	COG1801	Protein of unknown function DUF72
CUC43_18190	COG0582	viral genome integration into host DNA
CUC43_18195	COG5002	protein histidine kinase activity
CUC43_18210	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CUC43_18210	COG0392	lysyltransferase activity
CUC43_18225	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CUC43_18230	COG1686	Belongs to the peptidase S11 family
CUC43_18235	COG2715	membrane protein required for spore maturation
CUC43_18240	COG0700	Nucleoside recognition
CUC43_18245	COG1187	pseudouridine synthase activity
CUC43_18255	COG1333	cytochrome c biogenesis protein
CUC43_18260	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CUC43_18265	COG0745	RESPONSE REGULATOR receiver
CUC43_18270	COG5002	protein histidine kinase activity
CUC43_18275	COG2096	Adenosyltransferase
CUC43_18280	COG4942	peptidase
CUC43_18290	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CUC43_18295	COG1141	Ferredoxin
CUC43_18305	COG0514	ATP-dependent DNA helicase (RecQ)
CUC43_18310	COG1266	CAAX protease self-immunity
CUC43_18320	COG1408	metallophosphoesterase
CUC43_18330	COG4862	establishment of competence for transformation
CUC43_18335	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CUC43_18355	COG0492	ferredoxin-NADP+ reductase activity
CUC43_18430	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CUC43_18445	COG0142	geranyltranstransferase activity
CUC43_18455	COG0142	geranyltranstransferase activity
CUC43_18480	COG0457	Tetratricopeptide repeat
CUC43_18500	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CUC43_18505	COG2010	Cytochrome c
CUC43_18505	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CUC43_18515	COG4347	Protein of unknown function (DUF1405)
CUC43_18530	COG2738	Putative neutral zinc metallopeptidase
CUC43_18540	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_18550	COG1694	Mazg nucleotide pyrophosphohydrolase
CUC43_18570	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CUC43_18575	COG0438	transferase activity, transferring glycosyl groups
CUC43_18615	COG1199	ATP-dependent helicase activity
CUC43_18615	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CUC43_18635	COG3935	DnaD domain protein
CUC43_18640	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CUC43_18650	COG4499	WXG100 protein secretion system (Wss), protein YukC
CUC43_18650	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CUC43_18710	COG0116	Belongs to the methyltransferase superfamily
CUC43_18720	COG1199	ATP-dependent helicase activity
CUC43_18725	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CUC43_18735	COG0024	Methionine aminopeptidase
CUC43_18745	COG2233	PERMEase
CUC43_18750	COG2311	Membrane
CUC43_18760	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CUC43_18770	COG0456	acetyltransferase
CUC43_18805	COG0754	glutathionylspermidine amidase activity
CUC43_18820	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CUC43_18835	COG0454	-acetyltransferase
CUC43_18855	COG0328	RNA-DNA hybrid ribonuclease activity
CUC43_18890	COG3403	YqcI/YcgG family
CUC43_18895	COG1280	lysine exporter protein (LysE YggA)
CUC43_18910	COG3162	membrane
CUC43_18915	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CUC43_18920	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUC43_18935	COG0475	glutathione-regulated potassium exporter activity
CUC43_18940	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CUC43_18945	COG4978	Transcriptional regulator
CUC43_18945	COG0789	Transcriptional regulator
CUC43_18955	COG2323	membrane
CUC43_18960	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CUC43_19035	COG1923	regulation of RNA biosynthetic process
CUC43_19045	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CUC43_19055	COG2201	protein-glutamate methylesterase activity
CUC43_19060	COG2198	Histidine kinase
CUC43_19060	COG0643	Histidine kinase
CUC43_19065	COG1776	CheC inhibitor of MCP methylation
CUC43_19065	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CUC43_19080	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CUC43_19100	COG1256	bacterial-type flagellum assembly
CUC43_19105	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CUC43_19110	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CUC43_19125	COG1815	bacterial-type flagellum-dependent cell motility
CUC43_19130	COG1558	bacterial-type flagellum-dependent cell motility
CUC43_19135	COG1677	Flagellar hook-basal body complex protein FliE
CUC43_19145	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CUC43_19155	COG1157	protein secretion by the type III secretion system
CUC43_19190	COG0835	chemotaxis
CUC43_19190	COG0784	Response regulator, receiver
CUC43_19200	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CUC43_19205	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CUC43_19210	COG0741	lytic transglycosylase activity
CUC43_19220	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CUC43_19225	COG1776	CheC inhibitor of MCP methylation
CUC43_19225	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CUC43_19235	COG1338	Plays a role in the flagellum-specific transport system
CUC43_19240	COG1987	bacterial-type flagellum assembly
CUC43_19250	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CUC43_19255	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CUC43_19260	COG1419	protein localization to endoplasmic reticulum
CUC43_19265	COG4786	Flagellar basal body rod
CUC43_19270	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CUC43_19295	COG1309	transcriptional regulator
CUC43_19315	COG2329	Antibiotic biosynthesis monooxygenase
CUC43_19330	COG3764	Sortase (surface protein transpeptidase)
CUC43_19335	COG3764	Sortase (surface protein transpeptidase)
CUC43_19375	COG0725	ABC transporter, periplasmic molybdate-binding protein
CUC43_19380	COG1177	transmembrane transport
CUC43_19425	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_19435	COG0406	alpha-ribazole phosphatase activity
CUC43_19450	COG1846	Transcriptional regulator
CUC43_19460	COG0367	asparagine synthase
CUC43_19490	COG1802	Transcriptional regulator
CUC43_19495	COG0697	spore germination
CUC43_19500	COG1216	Glycosyl transferase, family 2
CUC43_19500	COG0438	transferase activity, transferring glycosyl groups
CUC43_19505	COG1757	Na H antiporter
CUC43_19510	COG0114	fumarate hydratase activity
CUC43_19530	COG0534	Mate efflux family protein
CUC43_19540	COG3340	Belongs to the peptidase S51 family
CUC43_19560	COG0785	Cytochrome C biogenesis protein
CUC43_19585	COG2733	membrane
CUC43_19625	COG1131	(ABC) transporter
CUC43_19640	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CUC43_19645	COG0528	UMP kinase activity
CUC43_19655	COG1027	Aspartate ammonia-lyase
CUC43_19660	COG0281	malic enzyme
CUC43_19665	COG4191	Histidine kinase
CUC43_19670	COG0784	Response regulator, receiver
CUC43_19675	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CUC43_19730	COG1051	belongs to the nudix hydrolase family
CUC43_19755	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUC43_19790	COG0477	Major facilitator Superfamily
CUC43_19795	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CUC43_19815	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CUC43_19820	COG4166	transmembrane transport
CUC43_19825	COG2223	nitrite transmembrane transporter activity
CUC43_19830	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CUC43_19845	COG2244	polysaccharide biosynthetic process
CUC43_19850	COG0733	neurotransmitter:sodium symporter activity
CUC43_19860	COG5566	PFAM Mor transcription activator
CUC43_19865	COG2323	membrane
CUC43_19895	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CUC43_19900	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CUC43_19905	COG0028	Belongs to the TPP enzyme family
CUC43_19915	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CUC43_19925	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CUC43_19955	COG2814	Major facilitator Superfamily
CUC43_19960	COG3384	dioxygenase
CUC43_19970	COG3279	Response regulator of the LytR AlgR family
CUC43_19975	COG0427	acetyl-CoA hydrolase
CUC43_20010	COG4166	transmembrane transport
CUC43_20040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUC43_20060	COG1914	H( )-stimulated, divalent metal cation uptake system
CUC43_20080	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CUC43_20085	COG0531	amino acid
CUC43_20115	COG1280	lysine exporter protein (LysE YggA)
CUC43_20125	COG1309	transcriptional regulator
CUC43_20130	COG2390	Transcriptional regulator
CUC43_20140	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CUC43_20145	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CUC43_20160	COG4846	Membrane protein involved in cytochrome C biogenesis
CUC43_20170	COG0006	proline dipeptidase activity
CUC43_20210	COG1114	Component of the transport system for branched-chain amino acids
CUC43_20225	COG2372	response to copper ion
CUC43_20225	COG1276	copper resistance
CUC43_20230	COG4549	nuclear export factor GLE1
CUC43_20240	COG0697	spore germination
CUC43_20245	COG0583	DNA-binding transcription factor activity
CUC43_20250	COG1959	2 iron, 2 sulfur cluster binding
CUC43_20255	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CUC43_20260	COG0778	Nitroreductase
CUC43_20275	COG0628	permease
CUC43_20280	COG0039	L-malate dehydrogenase activity
CUC43_20285	COG1231	oxidoreductase activity
CUC43_20310	COG1733	regulation of RNA biosynthetic process
CUC43_20315	COG2249	NAD(P)H dehydrogenase (quinone) activity
CUC43_20320	COG0318	PFAM AMP-dependent synthetase and ligase
CUC43_20335	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_20345	COG0384	phenazine biosynthesis protein PhzF
CUC43_20365	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_20385	COG1733	regulation of RNA biosynthetic process
CUC43_20390	COG1733	regulation of RNA biosynthetic process
CUC43_20395	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CUC43_20400	COG0673	inositol 2-dehydrogenase activity
CUC43_20405	COG2188	Transcriptional regulator
CUC43_20410	COG1733	regulation of RNA biosynthetic process
CUC43_20420	COG1393	Belongs to the ArsC family
CUC43_20455	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_20485	COG0463	Glycosyl transferase, family 2
CUC43_20500	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_20520	COG0814	amino acid
CUC43_20525	COG0346	lactoylglutathione lyase activity
CUC43_20540	COG2814	Major facilitator Superfamily
CUC43_20545	COG0656	L-ascorbic acid biosynthetic process
CUC43_20565	COG1733	regulation of RNA biosynthetic process
CUC43_20570	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CUC43_20575	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CUC43_20575	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CUC43_20585	COG0840	transmembrane signaling receptor activity
CUC43_20600	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_20620	COG4221	oxidoreductase activity
CUC43_20625	COG0789	Transcriptional regulator
CUC43_20630	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUC43_20635	COG0604	alcohol dehydrogenase
CUC43_20640	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CUC43_20645	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CUC43_20655	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CUC43_20660	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CUC43_20675	COG2706	6-phosphogluconolactonase activity
CUC43_20680	COG3813	Protein conserved in bacteria
CUC43_20685	COG1357	PFAM Pentapeptide repeats (8 copies)
CUC43_20690	COG0697	spore germination
CUC43_20720	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CUC43_20730	COG0789	Transcriptional regulator
CUC43_20735	COG1253	flavin adenine dinucleotide binding
CUC43_20760	COG0477	Major facilitator Superfamily
CUC43_20770	COG0500	methyltransferase
CUC43_20800	COG0628	permease
CUC43_20810	COG0180	Tryptophanyl-tRNA synthetase
CUC43_20815	COG0110	maltose O-acetyltransferase activity
CUC43_20820	COG1940	carbohydrate kinase activity
CUC43_20825	COG0346	lactoylglutathione lyase activity
CUC43_20860	COG1011	Hydrolase
CUC43_20885	COG1131	(ABC) transporter
CUC43_20895	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_20920	COG0778	Nitroreductase
CUC43_20925	COG1733	regulation of RNA biosynthetic process
CUC43_20945	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CUC43_20980	COG2356	endonuclease I
CUC43_20985	COG1288	antiporter activity
CUC43_20990	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CUC43_21005	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CUC43_21040	COG2249	NAD(P)H dehydrogenase (quinone) activity
CUC43_21050	COG2031	fatty acid transporter
CUC43_21070	COG1309	transcriptional regulator
CUC43_21075	COG2076	Multidrug Resistance protein
CUC43_21095	COG1131	(ABC) transporter
CUC43_21100	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CUC43_21115	COG2814	Major facilitator Superfamily
CUC43_21120	COG1846	Transcriptional regulator
CUC43_21135	COG0477	Major facilitator Superfamily
CUC43_21145	COG2843	Capsule synthesis protein
CUC43_21150	COG1876	peptidase activity
CUC43_21185	COG5632	N-Acetylmuramoyl-L-alanine amidase
CUC43_21185	COG3409	Peptidoglycan-binding domain 1 protein
CUC43_21200	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUC43_21200	COG2207	Transcriptional regulator
CUC43_21210	COG0662	Cupin 2, conserved barrel domain protein
CUC43_21230	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CUC43_21250	COG1619	proteins homologs of microcin C7 resistance protein MccF
CUC43_21270	COG0583	DNA-binding transcription factor activity
CUC43_21280	COG1139	Iron-sulfur cluster binding protein
CUC43_21285	COG1556	Lactate utilization protein
CUC43_21290	COG2271	Major facilitator Superfamily
CUC43_21295	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_21300	COG2808	Putative FMN-binding domain
CUC43_21305	COG0456	acetyltransferase
CUC43_21310	COG1846	Transcriptional regulator
CUC43_21315	COG2364	Membrane
CUC43_21325	COG3850	Histidine kinase
CUC43_21325	COG5002	protein histidine kinase activity
CUC43_21345	COG0577	efflux transmembrane transporter activity
CUC43_21365	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CUC43_21370	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CUC43_21380	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUC43_21385	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_21410	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CUC43_21480	COG4895	conserved protein (DUF2196)
CUC43_21490	COG2814	Major facilitator Superfamily
CUC43_21545	COG0346	lactoylglutathione lyase activity
CUC43_21560	COG1522	sequence-specific DNA binding
CUC43_21570	COG1309	transcriptional regulator
CUC43_21575	COG2814	Major facilitator Superfamily
CUC43_21585	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CUC43_21585	COG3320	Male sterility
CUC43_21605	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CUC43_21620	COG0640	Transcriptional regulator
CUC43_21625	COG0346	lactoylglutathione lyase activity
CUC43_21630	COG0798	PFAM Bile acid sodium symporter
CUC43_21665	COG0577	efflux transmembrane transporter activity
CUC43_21670	COG1136	(ABC) transporter
CUC43_21675	COG4641	Protein conserved in bacteria
CUC43_21715	COG1575	Belongs to the MenA family. Type 1 subfamily
CUC43_21735	COG5609	conserved protein (DUF2294)
CUC43_21740	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CUC43_21750	COG0288	reversible hydration of carbon dioxide
CUC43_21755	COG0415	Belongs to the DNA photolyase family
CUC43_21800	COG0583	DNA-binding transcription factor activity
CUC43_21835	COG0583	DNA-binding transcription factor activity
CUC43_21850	COG0531	amino acid
CUC43_21860	COG0534	Mate efflux family protein
CUC43_21865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUC43_21865	COG0723	plastoquinol--plastocyanin reductase activity
CUC43_21880	COG2124	cytochrome p450
CUC43_21890	COG1115	amino acid carrier protein
CUC43_21895	COG2066	Belongs to the glutaminase family
CUC43_21900	COG4191	Histidine kinase
CUC43_21905	COG0784	Response regulator, receiver
CUC43_21915	COG0697	spore germination
CUC43_21920	COG0531	amino acid
CUC43_21930	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CUC43_21935	COG0531	amino acid
CUC43_21940	COG0322	excinuclease ABC activity
CUC43_21950	COG1396	sequence-specific DNA binding
CUC43_21955	COG0252	asparaginase activity
CUC43_21960	COG1027	Aspartate ammonia-lyase
CUC43_21970	COG1063	alcohol dehydrogenase
CUC43_21990	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_22000	COG3848	Pyruvate phosphate dikinase
CUC43_22000	COG0574	Belongs to the PEP-utilizing enzyme family
CUC43_22015	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CUC43_22050	COG1960	acyl-CoA dehydrogenase activity
CUC43_22060	COG0640	Transcriptional regulator
CUC43_22065	COG0860	N-Acetylmuramoyl-L-alanine amidase
CUC43_22070	COG3142	Participates in the control of copper homeostasis
CUC43_22080	COG1414	Transcriptional regulator
CUC43_22085	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CUC43_22090	COG1984	allophanate hydrolase subunit 2
CUC43_22165	COG4335	DNA alkylation repair
CUC43_22175	COG0833	amino acid
CUC43_22185	COG0730	response to heat
CUC43_22225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUC43_22230	COG0697	spore germination
CUC43_22245	COG0456	acetyltransferase
CUC43_22275	COG1136	(ABC) transporter
CUC43_22285	COG3831	ATPase activity
CUC43_22285	COG4884	unkown
CUC43_22310	COG1846	Transcriptional regulator
CUC43_22315	COG0778	Nitroreductase
CUC43_22325	COG0714	Associated with various cellular activities
CUC43_22350	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CUC43_22360	COG0753	catalase activity
CUC43_22365	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CUC43_22385	COG0714	Associated with various cellular activities
CUC43_22405	COG0346	lactoylglutathione lyase activity
CUC43_22425	COG3279	Response regulator of the LytR AlgR family
CUC43_22435	COG4377	Putative membrane peptidase family (DUF2324)
CUC43_22450	COG3655	Transcriptional regulator
CUC43_22460	COG1785	Belongs to the alkaline phosphatase family
CUC43_22470	COG3239	Fatty acid desaturase
CUC43_22475	COG1690	Belongs to the RtcB family
CUC43_22485	COG0833	amino acid
CUC43_22495	COG1414	Transcriptional regulator
CUC43_22500	COG4187	Peptidase family M20/M25/M40
CUC43_22505	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CUC43_22525	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CUC43_22545	COG2329	Antibiotic biosynthesis monooxygenase
CUC43_22555	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_22590	COG1070	Carbohydrate kinase
CUC43_22595	COG2390	Transcriptional regulator
CUC43_22605	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUC43_22615	COG1879	ABC-type sugar transport system periplasmic component
CUC43_22640	COG3584	3D domain protein
CUC43_22640	COG1388	LysM domain
CUC43_22675	COG1605	Chorismate mutase
CUC43_22675	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CUC43_22695	COG0287	Prephenate dehydrogenase
CUC43_22710	COG1309	transcriptional regulator
CUC43_22715	COG1033	growth of symbiont in host cell
CUC43_22715	COG2409	Drug exporters of the RND superfamily
CUC43_22725	COG0488	(ABC) transporter
CUC43_22735	COG1368	sulfuric ester hydrolase activity
CUC43_22740	COG0861	Integral membrane protein TerC family
CUC43_22745	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUC43_22755	COG3037	sugar-specific permease SgaT UlaA
CUC43_22765	COG0726	polysaccharide deacetylase
CUC43_22790	COG2318	DinB family
CUC43_22795	COG0697	spore germination
CUC43_22820	COG2746	aminoglycoside 3-N-acetyltransferase activity
CUC43_22865	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUC43_22870	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUC43_22875	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUC43_22890	COG0628	permease
CUC43_22945	COG1131	(ABC) transporter
CUC43_22970	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CUC43_22975	COG0436	Aminotransferase
CUC43_23030	COG2261	transglycosylase associated protein
CUC43_23050	COG0477	Major facilitator Superfamily
CUC43_23050	COG2814	Major facilitator Superfamily
CUC43_23055	COG4533	DNA binding
CUC43_23060	COG0789	Transcriptional regulator
CUC43_23065	COG1664	Polymer-forming cytoskeletal
CUC43_23075	COG2814	Major facilitator Superfamily
CUC43_23120	COG1307	EDD domain protein, DegV family
CUC43_23130	COG1164	Oligoendopeptidase f
CUC43_23165	COG0745	RESPONSE REGULATOR receiver
CUC43_23170	COG5002	protein histidine kinase activity
CUC43_23175	COG2936	dipeptidyl-peptidase activity
CUC43_23225	COG4948	Mandelate Racemase Muconate Lactonizing
CUC43_23235	COG4166	transmembrane transport
CUC43_23255	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CUC43_23270	COG0586	Pfam SNARE associated Golgi protein
CUC43_23325	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUC43_23330	COG3938	Belongs to the proline racemase family
CUC43_23340	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUC43_23345	COG1012	belongs to the aldehyde dehydrogenase family
CUC43_23350	COG1115	amino acid carrier protein
CUC43_23355	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUC43_23370	COG3397	chitin binding
CUC43_23400	COG4637	Psort location Cytoplasmic, score
CUC43_23425	COG0514	ATP-dependent DNA helicase (RecQ)
CUC43_23445	COG3973	AAA domain
CUC43_23490	COG0658	competence protein
CUC43_23490	COG2333	competence protein COMEC
CUC43_23500	COG2315	Protein conserved in bacteria
CUC43_23505	COG2226	methyltransferase
CUC43_23510	COG2205	protein histidine kinase activity
CUC43_23525	COG1819	glycosyl
CUC43_23530	COG3397	chitin binding
CUC43_23535	COG2153	protein acetylation
CUC43_23565	COG0517	IMP dehydrogenase activity
CUC43_23565	COG4175	Glycine betaine
CUC43_23570	COG4176	ABC-type proline glycine betaine transport system permease component
CUC43_23610	COG0572	uridine kinase
CUC43_23615	COG0456	acetyltransferase
CUC43_23615	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CUC43_23620	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_23630	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CUC43_23635	COG0022	dehydrogenase e1 component
CUC43_23640	COG0508	dehydrogenase complex catalyzes the overall conversion of
CUC43_23645	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CUC43_23660	COG1959	2 iron, 2 sulfur cluster binding
CUC43_23675	COG1349	DNA-binding transcription factor activity
CUC43_23695	COG3284	Transcriptional regulator
CUC43_23710	COG1473	amidohydrolase
CUC43_23720	COG4948	Mandelate Racemase Muconate Lactonizing
CUC43_23725	COG3949	Membrane
CUC43_23735	COG1309	transcriptional regulator
CUC43_23770	COG3409	Peptidoglycan-binding domain 1 protein
CUC43_23770	COG3773	Cell wall hydrolase
CUC43_23775	COG2959	enzyme of heme biosynthesis
CUC43_23790	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUC43_23835	COG0697	spore germination
CUC43_23845	COG0201	protein transport
CUC43_23875	COG3227	Zinc metalloprotease (Elastase)
CUC43_23880	COG1523	belongs to the glycosyl hydrolase 13 family
CUC43_23930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUC43_23965	COG0322	excinuclease ABC activity
CUC43_24005	COG4667	esterase of the alpha-beta hydrolase superfamily
CUC43_24025	COG3878	Protein conserved in bacteria
CUC43_24055	COG0592	DNA-directed DNA polymerase activity
CUC43_24075	COG2223	nitrite transmembrane transporter activity
CUC43_24100	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CUC43_24110	COG0697	spore germination
CUC43_24115	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUC43_24130	COG0584	glycerophosphoryl diester phosphodiesterase
CUC43_24160	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_24205	COG0671	phosphoesterase, PA-phosphatase related
CUC43_24210	COG0604	alcohol dehydrogenase
CUC43_24215	COG5002	protein histidine kinase activity
CUC43_24220	COG0745	RESPONSE REGULATOR receiver
CUC43_24240	COG2205	protein histidine kinase activity
CUC43_24305	COG0109	protoheme IX farnesyltransferase activity
CUC43_24355	COG0723	plastoquinol--plastocyanin reductase activity
CUC43_24355	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUC43_24400	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CUC43_24425	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_24440	COG1794	racemase activity, acting on amino acids and derivatives
CUC43_24445	COG1819	glycosyl
CUC43_24455	COG5002	protein histidine kinase activity
CUC43_24465	COG0561	phosphatase activity
CUC43_24500	COG2124	cytochrome p450
CUC43_24560	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CUC43_24570	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUC43_24575	COG0460	homoserine dehydrogenase
CUC43_24595	COG0577	efflux transmembrane transporter activity
CUC43_24600	COG1136	(ABC) transporter
CUC43_24630	COG2205	protein histidine kinase activity
CUC43_24635	COG0745	RESPONSE REGULATOR receiver
CUC43_24645	COG3773	Cell wall hydrolase
CUC43_24650	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
CUC43_24660	COG3386	PFAM SMP-30 Gluconolaconase
CUC43_24670	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CUC43_24680	COG2323	membrane
CUC43_24705	COG2368	4-hydroxyphenylacetate
CUC43_24715	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUC43_24735	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CUC43_24755	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CUC43_24770	COG2226	methyltransferase
CUC43_24780	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CUC43_24795	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CUC43_24810	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CUC43_24825	COG3227	Zinc metalloprotease (Elastase)
CUC43_24845	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CUC43_24875	COG1686	Belongs to the peptidase S11 family
CUC43_24880	COG2318	DinB family
CUC43_24885	COG0596	Alpha beta hydrolase
CUC43_24890	COG0572	uridine kinase
CUC43_24905	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CUC43_24910	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CUC43_24915	COG1024	Enoyl-CoA hydratase
CUC43_24920	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUC43_24925	COG0511	ligase activity, forming carbon-carbon bonds
CUC43_24930	COG0439	Biotin carboxylase
CUC43_24935	COG1960	acyl-CoA dehydrogenase activity
CUC43_24955	COG1309	transcriptional regulator
CUC43_24965	COG1131	(ABC) transporter
CUC43_25000	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CUC43_25005	COG1442	glycosyl transferase family 8
CUC43_25010	COG1088	dTDP-glucose 4,6-dehydratase activity
CUC43_25020	COG0457	Tetratricopeptide repeat
CUC43_25055	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUC43_25060	COG3300	MHYT domain
CUC43_25060	COG5001	Diguanylate cyclase
CUC43_25095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_25115	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CUC43_25115	COG2755	lipolytic protein G-D-S-L family
CUC43_25130	COG3773	Cell wall hydrolase
CUC43_25145	COG3718	enzyme involved in inositol metabolism
CUC43_25175	COG0673	inositol 2-dehydrogenase activity
CUC43_25185	COG2814	Major facilitator Superfamily
CUC43_25190	COG1609	Transcriptional regulator
CUC43_25195	COG0671	phosphoesterase, PA-phosphatase related
CUC43_25200	COG2367	Beta-lactamase
CUC43_25220	COG1595	DNA-templated transcription, initiation
CUC43_25245	COG1686	Belongs to the peptidase S11 family
CUC43_25265	COG2195	Cleaves the N-terminal amino acid of tripeptides
CUC43_25295	COG1846	Transcriptional regulator
CUC43_25300	COG3961	Belongs to the TPP enzyme family
CUC43_25310	COG3615	Tellurite resistance protein tehB
CUC43_25310	COG0500	methyltransferase
CUC43_25315	COG1136	(ABC) transporter
CUC43_25315	COG0577	efflux transmembrane transporter activity
CUC43_25330	COG1309	transcriptional regulator
CUC43_25360	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_25385	COG1846	Transcriptional regulator
CUC43_25405	COG2971	BadF BadG BcrA BcrD
CUC43_25430	COG1649	PFAM Uncharacterised BCR, COG1649
CUC43_25460	COG1595	DNA-templated transcription, initiation
CUC43_25475	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CUC43_25505	COG1396	sequence-specific DNA binding
CUC43_25525	COG1132	(ABC) transporter
CUC43_25530	COG1132	(ABC) transporter
CUC43_25565	COG0583	DNA-binding transcription factor activity
CUC43_25575	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_25585	COG0010	Belongs to the arginase family
CUC43_25790	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CUC43_25830	COG2002	toxin-antitoxin pair type II binding
CUC43_25880	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_25920	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CUC43_25920	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CUC43_26030	COG1278	Cold shock
CUC43_26040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUC43_26080	COG1247	-acetyltransferase
CUC43_26115	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_26125	COG1846	Transcriptional regulator
CUC43_26170	COG0028	Belongs to the TPP enzyme family
CUC43_26185	COG2814	Major facilitator Superfamily
CUC43_26190	COG0596	Alpha beta hydrolase
CUC43_26205	COG1136	(ABC) transporter
CUC43_26215	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CUC43_26220	COG1187	pseudouridine synthase activity
CUC43_26225	COG2329	Antibiotic biosynthesis monooxygenase
CUC43_26245	COG1115	amino acid carrier protein
CUC43_26255	COG2318	DinB family
CUC43_26265	COG0776	regulation of translation
CUC43_26280	COG2814	Major facilitator Superfamily
CUC43_26285	COG3251	PFAM MbtH domain protein
CUC43_26290	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CUC43_26295	COG1535	isochorismatase
CUC43_26295	COG3433	isochorismatase activity
CUC43_26300	COG1021	2,3-dihydroxybenzoate-AMP ligase
CUC43_26305	COG1169	isochorismate synthase
CUC43_26310	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_26315	COG2223	nitrite transmembrane transporter activity
CUC43_26345	COG0420	3'-5' exonuclease activity
CUC43_26360	COG1024	Enoyl-CoA hydratase
CUC43_26365	COG1280	lysine exporter protein (LysE YggA)
CUC43_26370	COG1012	belongs to the aldehyde dehydrogenase family
CUC43_26375	COG2084	Dehydrogenase
CUC43_26380	COG1960	acyl-CoA dehydrogenase activity
CUC43_26385	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CUC43_26390	COG2079	MmgE PrpD family protein
CUC43_26395	COG0372	Belongs to the citrate synthase family
CUC43_26400	COG4841	protein insertion into membrane
CUC43_26405	COG2814	Major facilitator Superfamily
CUC43_26415	COG4499	WXG100 protein secretion system (Wss), protein YukC
CUC43_26415	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CUC43_26435	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_26470	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CUC43_26505	COG1595	DNA-templated transcription, initiation
CUC43_26540	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CUC43_26545	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CUC43_26550	COG0671	phosphoesterase, PA-phosphatase related
CUC43_26560	COG3064	Membrane
CUC43_26560	COG0515	serine threonine protein kinase
CUC43_26560	COG4991	sh3 domain protein
CUC43_26595	COG1509	lysine 2,3-aminomutase activity
CUC43_26600	COG3829	transcription factor binding
CUC43_26605	COG0456	acetyltransferase
CUC43_26610	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUC43_26615	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CUC43_26620	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CUC43_26625	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUC43_26645	COG5506	Protein of unknown function (DUF1694)
CUC43_26650	COG1012	belongs to the aldehyde dehydrogenase family
CUC43_26655	COG1253	flavin adenine dinucleotide binding
CUC43_26690	COG1174	glycine betaine transport
CUC43_26695	COG0517	IMP dehydrogenase activity
CUC43_26695	COG1125	glycine betaine transport
CUC43_26725	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CUC43_26750	COG1064	alcohol dehydrogenase
CUC43_26755	COG1737	Transcriptional regulator
CUC43_26760	COG1737	Transcriptional regulator
CUC43_26765	COG2197	response regulator
CUC43_26770	COG2203	Gaf domain
CUC43_26770	COG4585	Histidine kinase
CUC43_26775	COG0668	transmembrane transport
CUC43_26780	COG0071	Belongs to the small heat shock protein (HSP20) family
CUC43_26785	COG1335	isochorismatase
CUC43_26805	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CUC43_26810	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUC43_26825	COG0367	asparagine synthase
CUC43_26830	COG0071	Belongs to the small heat shock protein (HSP20) family
CUC43_26835	COG1999	signal sequence binding
CUC43_26840	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CUC43_26845	COG1307	EDD domain protein, DegV family
CUC43_26860	COG0805	protein transport
CUC43_26870	COG1272	protein, Hemolysin III
CUC43_26875	COG0204	Acyl-transferase
CUC43_26885	COG0768	penicillin binding
CUC43_26925	COG0546	phosphoglycolate phosphatase activity
CUC43_26935	COG4473	ABC transporter
CUC43_26940	COG1131	(ABC) transporter
CUC43_26950	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CUC43_26955	COG0456	acetyltransferase
CUC43_26995	COG2610	gluconate transmembrane transporter activity
CUC43_27020	COG0733	neurotransmitter:sodium symporter activity
CUC43_27145	COG1674	ftsk spoiiie
CUC43_27165	COG0017	Asparaginyl-tRNA synthetase
CUC43_27225	COG0018	arginyl-trna synthetase
CUC43_27230	COG2136	Putative SAM-dependent methyltransferase
CUC43_27230	COG2521	methyltransferase
CUC43_27245	COG1413	lyase activity
CUC43_27270	COG0488	(ABC) transporter
CUC43_27275	COG1418	mRNA catabolic process
CUC43_27305	COG0305	Participates in initiation and elongation during chromosome replication
CUC43_27315	COG2359	stage V sporulation protein S
CUC43_27345	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CUC43_27350	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CUC43_27355	COG2146	nitrite reductase [NAD(P)H] activity
CUC43_27360	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CUC43_27360	COG1587	Uroporphyrinogen-III synthase
CUC43_27370	COG1648	precorrin-2 dehydrogenase activity
CUC43_27395	COG2223	nitrite transmembrane transporter activity
CUC43_27405	COG0314	molybdopterin synthase activity
CUC43_27410	COG0303	'Molybdopterin
CUC43_27415	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CUC43_27420	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CUC43_27425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CUC43_27430	COG2181	nitrate reductase activity
CUC43_27435	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CUC43_27440	COG1140	nitrate reductase beta subunit
CUC43_27445	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CUC43_27450	COG0714	Associated with various cellular activities
CUC43_27455	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CUC43_27460	COG1305	Transglutaminase-like
CUC43_27465	COG0386	Belongs to the glutathione peroxidase family
CUC43_27475	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUC43_27475	COG0426	domain, Protein
CUC43_27500	COG1595	DNA-templated transcription, initiation
CUC43_27505	COG0604	alcohol dehydrogenase
CUC43_27515	COG0346	lactoylglutathione lyase activity
CUC43_27535	COG2226	methyltransferase
CUC43_27560	COG3874	Sporulation protein YtfJ
CUC43_27610	COG0456	acetyltransferase
CUC43_27640	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUC43_27645	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_27650	COG1819	glycosyl
CUC43_27670	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CUC43_27680	COG0561	phosphatase activity
CUC43_27720	COG0251	oxidation-reduction process
CUC43_27735	COG0196	riboflavin kinase activity
CUC43_27745	COG2368	4-hydroxyphenylacetate
CUC43_27760	COG2211	Major facilitator Superfamily
CUC43_27765	COG0154	amidase activity
CUC43_27775	COG1876	peptidase activity
CUC43_27785	COG0860	N-Acetylmuramoyl-L-alanine amidase
CUC43_27805	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CUC43_27810	COG1114	Component of the transport system for branched-chain amino acids
CUC43_27825	COG1253	flavin adenine dinucleotide binding
CUC43_27830	COG2839	Protein conserved in bacteria
CUC43_27835	COG0702	epimerase
CUC43_27850	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CUC43_27860	COG1607	acyl-coa hydrolase
CUC43_27865	COG3689	TIGRFAM TIGR03943 family protein
CUC43_27870	COG0701	Predicted permease
CUC43_27880	COG2244	polysaccharide biosynthetic process
CUC43_27885	COG0586	Pfam SNARE associated Golgi protein
CUC43_27890	COG1051	belongs to the nudix hydrolase family
CUC43_27895	COG5337	Spore coat protein CotH
CUC43_27915	COG0406	alpha-ribazole phosphatase activity
CUC43_27930	COG4166	transmembrane transport
CUC43_27940	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CUC43_27950	COG0702	epimerase
CUC43_27960	COG0803	Belongs to the bacterial solute-binding protein 9 family
CUC43_27960	COG3443	Belongs to the bacterial solute-binding protein 9 family
CUC43_27965	COG0456	acetyltransferase
CUC43_27970	COG0523	cobalamin synthesis protein
CUC43_27975	COG4989	oxidoreductase activity
CUC43_27980	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUC43_27985	COG1231	oxidoreductase activity
CUC43_27995	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUC43_28010	COG0783	Belongs to the Dps family
CUC43_28015	COG3949	Membrane
CUC43_28060	COG2814	Major facilitator Superfamily
CUC43_28065	COG0667	Aldo Keto reductase
CUC43_28070	COG0640	Transcriptional regulator
CUC43_28075	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
CUC43_28080	COG1404	Belongs to the peptidase S8 family
CUC43_28085	COG2002	toxin-antitoxin pair type II binding
CUC43_28090	COG0577	efflux transmembrane transporter activity
CUC43_28125	COG1752	Esterase of the alpha-beta hydrolase superfamily
CUC43_28135	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUC43_28140	COG1279	arginine transmembrane transporter activity
CUC43_28145	COG2814	Major facilitator Superfamily
CUC43_28155	COG1082	Xylose isomerase domain protein TIM barrel
CUC43_28170	COG0318	PFAM AMP-dependent synthetase and ligase
CUC43_28175	COG4264	IucA IucC family
CUC43_28185	COG1247	-acetyltransferase
CUC43_28190	COG1285	pathogenesis
CUC43_28200	COG0726	polysaccharide deacetylase
CUC43_28205	COG5002	protein histidine kinase activity
CUC43_28210	COG0745	RESPONSE REGULATOR receiver
CUC43_28220	COG1316	TRANSCRIPTIONal
CUC43_28245	COG0460	homoserine dehydrogenase
CUC43_28260	COG0726	polysaccharide deacetylase
CUC43_28275	COG0300	oxidoreductase activity
CUC43_28285	COG5002	protein histidine kinase activity
CUC43_28290	COG0745	RESPONSE REGULATOR receiver
CUC43_28295	COG1132	(ABC) transporter
CUC43_28305	COG1388	LysM domain
CUC43_28305	COG0791	NLP P60 protein
CUC43_28320	COG1686	Belongs to the peptidase S11 family
CUC43_28350	COG1216	Glycosyl transferase, family 2
CUC43_28360	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CUC43_28365	COG4988	ABC transporter
CUC43_28370	COG1294	oxidase, subunit
CUC43_28375	COG1271	oxidase subunit
CUC43_28395	COG1942	4-Oxalocrotonate Tautomerase
CUC43_28405	COG0583	DNA-binding transcription factor activity
CUC43_28415	COG0559	Belongs to the binding-protein-dependent transport system permease family
CUC43_28425	COG0411	ABC transporter
CUC43_28435	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CUC43_28440	COG2030	dehydratase
CUC43_28445	COG0318	PFAM AMP-dependent synthetase and ligase
CUC43_28475	COG0726	polysaccharide deacetylase
CUC43_28485	COG1191	sigma factor activity
CUC43_28495	COG1280	lysine exporter protein (LysE YggA)
CUC43_28515	COG3152	Membrane
CUC43_28545	COG1151	hydroxylamine reductase activity
CUC43_28560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUC43_28600	COG2072	flavoprotein involved in K transport
CUC43_28640	COG1113	amino acid transport
CUC43_28645	COG2814	Major facilitator Superfamily
CUC43_28675	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CUC43_28680	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CUC43_28695	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUC43_28700	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_28705	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_28710	COG3739	integral membrane protein
CUC43_28745	COG0583	DNA-binding transcription factor activity
CUC43_28765	COG1193	negative regulation of DNA recombination
CUC43_28780	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CUC43_28785	COG1164	Oligoendopeptidase f
CUC43_28790	COG4978	Transcriptional regulator
CUC43_28790	COG0789	Transcriptional regulator
CUC43_28805	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CUC43_28835	COG0584	glycerophosphoryl diester phosphodiesterase
CUC43_28890	COG0640	Transcriptional regulator
CUC43_28895	COG0604	alcohol dehydrogenase
CUC43_28905	COG0457	Tetratricopeptide repeat
CUC43_28915	COG2808	Putative FMN-binding domain
CUC43_28920	COG0456	acetyltransferase
CUC43_28920	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CUC43_28930	COG0385	Bile acid
CUC43_28935	COG0277	FAD linked oxidase domain protein
CUC43_28960	COG0825	malonyl-CoA metabolic process
CUC43_28980	COG1309	transcriptional regulator
CUC43_29010	COG3852	Histidine kinase
CUC43_29020	COG1285	pathogenesis
CUC43_29035	COG2514	catechol 2,3-dioxygenase activity
CUC43_29040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUC43_29045	COG1126	abc transporter atp-binding protein
CUC43_29065	COG2720	vancomycin resistance protein
CUC43_29095	COG1278	Cold shock
CUC43_29105	COG0716	FMN binding
CUC43_29135	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_29145	COG0165	Argininosuccinate lyase
CUC43_29160	COG4145	pantothenate transmembrane transporter activity
CUC43_29170	COG1012	belongs to the aldehyde dehydrogenase family
CUC43_29175	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_29185	COG1657	PFAM Prenyltransferase squalene oxidase
CUC43_29190	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CUC43_29195	COG2962	Rard protein
CUC43_29200	COG3326	Membrane
CUC43_29215	COG0489	protein tyrosine kinase activity
CUC43_29225	COG0314	molybdopterin synthase activity
CUC43_29230	COG0303	'Molybdopterin
CUC43_29235	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CUC43_29240	COG2116	formate transmembrane transporter activity
CUC43_29270	COG5609	conserved protein (DUF2294)
CUC43_29275	COG2427	Protein of unknown function (DUF1641)
CUC43_29405	COG0740	serine-type endopeptidase activity
CUC43_29415	COG1802	Transcriptional regulator
CUC43_29415	COG4626	Terminase
CUC43_29450	COG1674	ftsk spoiiie
CUC43_29450	COG4980	gas vesicle protein
CUC43_29455	COG0582	viral genome integration into host DNA
CUC43_29475	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_29515	COG1484	DNA-dependent DNA replication
CUC43_29565	COG3383	formate dehydrogenase (NAD+) activity
CUC43_29575	COG0697	spore germination
CUC43_29620	COG2226	methyltransferase
CUC43_29625	COG4166	transmembrane transport
CUC43_29630	COG4166	transmembrane transport
CUC43_29635	COG4166	transmembrane transport
CUC43_29645	COG1316	TRANSCRIPTIONal
CUC43_29655	COG1595	DNA-templated transcription, initiation
CUC43_29675	COG1131	(ABC) transporter
CUC43_29695	COG0673	inositol 2-dehydrogenase activity
CUC43_29700	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CUC43_29705	COG0187	DNA topoisomerase II activity
CUC43_29715	COG1832	CoA-binding protein
CUC43_29720	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUC43_29725	COG0745	RESPONSE REGULATOR receiver
CUC43_29745	COG4841	protein insertion into membrane
CUC43_29750	COG0824	Thioesterase
CUC43_29775	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CUC43_29785	COG2274	protein secretion by the type I secretion system
CUC43_29790	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CUC43_29800	COG0726	polysaccharide deacetylase
CUC43_29820	COG2211	Major facilitator Superfamily
CUC43_29835	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CUC43_29850	COG0183	Belongs to the thiolase family
CUC43_29855	COG0318	PFAM AMP-dependent synthetase and ligase
CUC43_29860	COG1268	BioY protein
CUC43_29865	COG0318	PFAM AMP-dependent synthetase and ligase
CUC43_29875	COG1131	(ABC) transporter
CUC43_29880	COG1396	sequence-specific DNA binding
CUC43_29935	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CUC43_29950	COG5002	protein histidine kinase activity
CUC43_29955	COG0400	carboxylic ester hydrolase activity
CUC43_29960	COG0346	lactoylglutathione lyase activity
CUC43_29965	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CUC43_29975	COG0069	glutamate synthase activity
CUC43_29980	COG1902	pentaerythritol trinitrate reductase activity
CUC43_30000	COG0010	Belongs to the arginase family
CUC43_30055	COG4846	Membrane protein involved in cytochrome C biogenesis
CUC43_30060	COG0785	Cytochrome C biogenesis protein
CUC43_30085	COG1131	(ABC) transporter
CUC43_30095	COG0583	DNA-binding transcription factor activity
CUC43_30105	COG1346	cytolysis
CUC43_30120	COG0730	response to heat
CUC43_30130	COG5632	N-Acetylmuramoyl-L-alanine amidase
CUC43_30130	COG3409	Peptidoglycan-binding domain 1 protein
CUC43_30150	COG1132	(ABC) transporter
CUC43_30155	COG1132	(ABC) transporter
CUC43_30180	COG3639	organic phosphonate transmembrane transporter activity
CUC43_30190	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUC43_30195	COG0737	Belongs to the 5'-nucleotidase family
CUC43_30205	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CUC43_30225	COG1695	Transcriptional regulator
CUC43_30230	COG1132	(ABC) transporter
CUC43_30260	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CUC43_30265	COG0110	maltose O-acetyltransferase activity
CUC43_30270	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CUC43_30300	COG0438	transferase activity, transferring glycosyl groups
CUC43_30305	COG1442	glycosyl transferase family 8
CUC43_30305	COG1216	Glycosyl transferase, family 2
CUC43_30315	COG1442	glycosyl transferase family 8
CUC43_30330	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CUC43_30330	COG0463	Glycosyl transferase, family 2
CUC43_30335	COG0438	transferase activity, transferring glycosyl groups
CUC43_30340	COG0438	transferase activity, transferring glycosyl groups
CUC43_30345	COG1086	Polysaccharide biosynthesis protein
CUC43_30350	COG0489	protein tyrosine kinase activity
CUC43_30355	COG3944	biosynthesis protein
CUC43_30360	COG0174	glutamine synthetase
CUC43_30365	COG0789	Transcriptional regulator
CUC43_30370	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CUC43_30375	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CUC43_30380	COG2860	membrane
CUC43_30385	COG0464	growth
CUC43_30415	COG1388	LysM domain
CUC43_30415	COG3584	3D domain protein
CUC43_30425	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CUC43_30425	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CUC43_30425	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUC43_30430	COG1105	Belongs to the carbohydrate kinase PfkB family
CUC43_30435	COG1349	DNA-binding transcription factor activity
CUC43_30440	COG1979	alcohol dehydrogenase
CUC43_30445	COG2322	membrane
CUC43_30460	COG1113	amino acid transport
CUC43_30475	COG1408	metallophosphoesterase
CUC43_30480	COG2116	formate transmembrane transporter activity
CUC43_30495	COG2217	Heavy metal translocating P-type atpase
CUC43_30500	COG2608	mercury ion transmembrane transporter activity
CUC43_30505	COG1937	Protein conserved in bacteria
CUC43_30515	COG2819	hydrolase of the alpha beta superfamily
CUC43_30520	COG1120	ATPase activity
CUC43_30525	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_30530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUC43_30535	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUC43_30540	COG0708	Exodeoxyribonuclease III
CUC43_30545	COG2169	Transcriptional regulator
CUC43_30550	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CUC43_30555	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CUC43_30565	COG2364	Membrane
CUC43_30580	COG2267	carboxylic ester hydrolase activity
CUC43_30585	COG0346	lactoylglutathione lyase activity
CUC43_30605	COG0384	phenazine biosynthesis protein PhzF
CUC43_30615	COG1346	cytolysis
CUC43_30620	COG1380	Effector of murein hydrolase LrgA
CUC43_30625	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUC43_30635	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CUC43_30645	COG2188	Transcriptional regulator
CUC43_30650	COG2723	6-phospho-beta-galactosidase activity
CUC43_30660	COG1404	Belongs to the peptidase S8 family
CUC43_30665	COG3773	Cell wall hydrolase
CUC43_30685	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CUC43_30700	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CUC43_30745	COG4550	Control of competence regulator ComK, YlbF/YmcA
CUC43_30755	COG1013	pyruvate-flavodoxin oxidoreductase activity
CUC43_30760	COG0674	pyruvate-flavodoxin oxidoreductase activity
CUC43_30760	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CUC43_30770	COG2359	stage V sporulation protein S
CUC43_30775	COG1692	metallophosphoesterase
CUC43_30805	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CUC43_30810	COG1426	Protein conserved in bacteria
CUC43_30825	COG0300	oxidoreductase activity
CUC43_30830	COG0612	Peptidase, M16
CUC43_30835	COG0612	Peptidase, M16
CUC43_30865	COG2188	Transcriptional regulator
CUC43_30875	COG1674	ftsk spoiiie
CUC43_30885	COG0740	serine-type endopeptidase activity
CUC43_30890	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CUC43_30905	COG0527	aspartate kinase activity
CUC43_30910	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CUC43_30915	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CUC43_30920	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUC43_30925	COG1873	PFAM PRC-barrel domain
CUC43_30930	COG0612	Peptidase, M16
CUC43_30935	COG0726	polysaccharide deacetylase
CUC43_30950	COG0196	riboflavin kinase activity
CUC43_30965	COG1550	Protein conserved in bacteria
CUC43_30975	COG1358	cellular component organization or biogenesis
CUC43_30980	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CUC43_30985	COG0195	Participates in both transcription termination and antitermination
CUC43_31010	COG0750	zinc metalloprotease
CUC43_31020	COG4589	Belongs to the CDS family
CUC43_31035	COG0528	UMP kinase activity
CUC43_31065	COG4974	Belongs to the 'phage' integrase family
CUC43_31075	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CUC43_31095	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CUC43_31135	COG1837	Belongs to the UPF0109 family
CUC43_31145	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CUC43_31155	COG0552	protein localization to endoplasmic reticulum
CUC43_31160	COG1196	nuclear chromosome segregation
CUC43_31175	COG1028	Short-chain dehydrogenase reductase Sdr
CUC43_31180	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CUC43_31195	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CUC43_31200	COG1461	Dihydroxyacetone kinase
CUC43_31205	COG1302	Protein conserved in bacteria
CUC43_31220	COG1564	THIamine pyrophosphokinase
CUC43_31225	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CUC43_31235	COG2815	serine threonine protein kinase
CUC43_31235	COG0515	serine threonine protein kinase
CUC43_31240	COG0631	protein serine/threonine phosphatase activity
CUC43_31270	COG3316	Transposase and inactivated derivatives
CUC43_31275	COG3316	Transposase and inactivated derivatives
CUC43_31285	COG3316	Transposase and inactivated derivatives
CUC43_31305	COG3316	Transposase and inactivated derivatives
CUC43_31325	COG3316	Transposase and inactivated derivatives
CUC43_31355	COG0745	RESPONSE REGULATOR receiver
CUC43_31365	COG3316	Transposase and inactivated derivatives
CUC43_31380	COG5002	protein histidine kinase activity
CUC43_31470	COG3316	Transposase and inactivated derivatives
CUC43_31505	COG2378	regulation of single-species biofilm formation
CUC43_31510	COG3316	Transposase and inactivated derivatives
CUC43_31550	COG3706	GGDEF domain
CUC43_31585	COG3316	Transposase and inactivated derivatives
CUC43_31630	COG3316	Transposase and inactivated derivatives
CUC43_31635	COG3316	Transposase and inactivated derivatives
CUC43_31645	COG3316	Transposase and inactivated derivatives
CUC43_31660	COG3316	Transposase and inactivated derivatives
CUC43_31680	COG3316	Transposase and inactivated derivatives
CUC43_31695	COG3316	Transposase and inactivated derivatives
CUC43_31750	COG1301	dicarboxylic acid transport
CUC43_31755	COG1114	Component of the transport system for branched-chain amino acids
CUC43_31785	COG3316	Transposase and inactivated derivatives
CUC43_31795	COG4974	Belongs to the 'phage' integrase family
CUC43_31810	COG3316	Transposase and inactivated derivatives
CUC43_31895	COG0577	efflux transmembrane transporter activity
CUC43_31900	COG1136	(ABC) transporter
CUC43_31930	COG4133	protoheme IX ABC transporter activity
CUC43_31975	COG2002	toxin-antitoxin pair type II binding
CUC43_31995	COG3316	Transposase and inactivated derivatives
CUC43_32080	COG3316	Transposase and inactivated derivatives
CUC43_32095	COG3316	Transposase and inactivated derivatives
CUC43_32120	COG3316	Transposase and inactivated derivatives
CUC43_32135	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CUC43_32140	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CUC43_32145	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CUC43_32150	COG0697	spore germination
CUC43_32180	COG3316	Transposase and inactivated derivatives
CUC43_32195	COG3209	COG3209 Rhs family protein
CUC43_32200	COG3316	Transposase and inactivated derivatives
CUC43_32260	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_32265	COG3316	Transposase and inactivated derivatives
CUC43_32270	COG0546	phosphoglycolate phosphatase activity
CUC43_32320	COG0577	efflux transmembrane transporter activity
CUC43_32325	COG1136	(ABC) transporter
CUC43_32330	COG2205	protein histidine kinase activity
CUC43_32335	COG0745	RESPONSE REGULATOR receiver
CUC43_32340	COG3316	Transposase and inactivated derivatives
CUC43_32345	COG3316	Transposase and inactivated derivatives
CUC43_32400	COG3316	Transposase and inactivated derivatives
CUC43_32425	COG3316	Transposase and inactivated derivatives
CUC43_32465	COG3316	Transposase and inactivated derivatives
CUC43_32480	COG0697	spore germination
CUC43_32500	COG1136	(ABC) transporter
CUC43_32525	COG3316	Transposase and inactivated derivatives
CUC43_32540	COG3316	Transposase and inactivated derivatives
CUC43_32555	COG0463	Glycosyl transferase, family 2
CUC43_32600	COG0776	regulation of translation
CUC43_32605	COG1923	regulation of RNA biosynthetic process
CUC43_32610	COG2002	toxin-antitoxin pair type II binding
CUC43_32635	COG3316	Transposase and inactivated derivatives
CUC43_32640	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CUC43_32755	COG0457	Tetratricopeptide repeat
CUC43_32790	COG1396	sequence-specific DNA binding
CUC43_32885	COG3505	Type IV secretory pathway VirD4
CUC43_32915	COG0791	NLP P60 protein
CUC43_32915	COG3883	PFAM NLP P60 protein
CUC43_33010	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_33020	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CUC43_33050	COG2002	toxin-antitoxin pair type II binding
CUC43_33105	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_33120	COG0463	Glycosyl transferase, family 2
CUC43_33170	COG3316	Transposase and inactivated derivatives
CUC43_33200	COG3316	Transposase and inactivated derivatives
CUC43_33240	COG1181	Belongs to the D-alanine--D-alanine ligase family
CUC43_33270	COG2963	transposase activity
CUC43_33305	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_33315	COG4974	Belongs to the 'phage' integrase family
CUC43_33450	COG3335	DDE superfamily endonuclease
CUC43_33455	COG5298	Protein conserved in bacteria
CUC43_33495	COG3316	Transposase and inactivated derivatives
CUC43_33570	COG0791	NLP P60 protein
CUC43_33570	COG0741	lytic transglycosylase activity
CUC43_33605	COG3547	Transposase (IS116 IS110 IS902 family)
CUC43_33705	COG1674	ftsk spoiiie
CUC43_33725	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CUC43_33740	COG2002	toxin-antitoxin pair type II binding
CUC43_33745	COG1923	regulation of RNA biosynthetic process
CUC43_33790	COG0582	viral genome integration into host DNA
CUC43_33855	COG3316	Transposase and inactivated derivatives
CUC43_33870	COG3316	Transposase and inactivated derivatives
CUC43_33885	COG3316	Transposase and inactivated derivatives
CUC43_33910	COG1136	(ABC) transporter
CUC43_33930	COG3316	Transposase and inactivated derivatives
CUC43_33945	COG0582	viral genome integration into host DNA
CUC43_33950	COG3209	COG3209 Rhs family protein
CUC43_33960	COG3316	Transposase and inactivated derivatives
CUC43_34015	COG1192	Involved in chromosome partitioning
CUC43_34075	COG3316	Transposase and inactivated derivatives
CUC43_34090	COG3316	Transposase and inactivated derivatives