CUC43_00035 SM01409 CUC43_00035 CUC43_00040 SM00072 Guanylate kinase homologues. CUC43_00055 SM00831 Cation transporter/ATPase, N-terminus CUC43_00115 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CUC43_00130 SM00851 MGS-like domain CUC43_00130 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CUC43_00130 SM01209 CUC43_00130 CUC43_00135 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CUC43_00160 SM00363 S4 RNA-binding domain CUC43_00185 SM00363 S4 RNA-binding domain CUC43_00230 SM00864 Tubulin/FtsZ family, GTPase domain CUC43_00230 SM00865 Tubulin/FtsZ family, C-terminal domain CUC43_00235 SM00842 Cell division protein FtsA CUC43_00275 SM00740 CUC43_00275 CUC43_00280 SM00740 CUC43_00280 CUC43_00310 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains CUC43_00345 SM00530 Helix-turn-helix XRE-family like proteins CUC43_00535 SM00530 Helix-turn-helix XRE-family like proteins CUC43_00585 SM00966 SpoVT / AbrB like domain CUC43_00595 SM00382 ATPases associated with a variety of cellular activities CUC43_00620 SM00530 Helix-turn-helix XRE-family like proteins CUC43_00625 SM00530 Helix-turn-helix XRE-family like proteins CUC43_00640 SM00530 Helix-turn-helix XRE-family like proteins CUC43_00670 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUC43_00715 SM00855 Phosphoglycerate mutase family CUC43_00775 SM00878 Biotin carboxylase C-terminal domain CUC43_00800 SM00670 Large family of predicted nucleotide-binding domains CUC43_00825 SM00838 Elongation factor G C-terminus CUC43_00905 SM00861 Transketolase, pyrimidine binding domain CUC43_00940 SM00849 Metallo-beta-lactamase superfamily CUC43_01005 SM00052 Putative diguanylate phosphodiesterase CUC43_01105 SM00387 Histidine kinase-like ATPases CUC43_01105 SM00388 His Kinase A (phosphoacceptor) domain CUC43_01120 SM00354 helix_turn _helix lactose operon repressor CUC43_01140 SM00642 Alpha-amylase domain CUC43_01145 SM00642 Alpha-amylase domain CUC43_01150 SM00382 ATPases associated with a variety of cellular activities CUC43_01190 SM00382 ATPases associated with a variety of cellular activities CUC43_01275 SM01007 Class II Aldolase and Adducin N-terminal domain CUC43_01305 SM00267 diguanylate cyclase CUC43_01340 SM01061 CAT RNA binding domain CUC43_01350 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_01350 SM00866 CUC43_01350 CUC43_01365 SM00849 Metallo-beta-lactamase superfamily CUC43_01470 SM00387 Histidine kinase-like ATPases CUC43_01480 SM00936 Penicillin-binding protein 5, C-terminal domain CUC43_01490 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_01495 SM00382 ATPases associated with a variety of cellular activities CUC43_01515 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_01535 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CUC43_01630 SM00354 helix_turn _helix lactose operon repressor CUC43_01650 SM00704 CDGSH-type zinc finger. Function unknown. CUC43_01680 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_01680 SM00876 Biotin and Thiamin Synthesis associated domain CUC43_01735 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_01750 SM00860 SMI1 / KNR4 family CUC43_01780 SM00859 Semialdehyde dehydrogenase, NAD binding domain CUC43_01795 SM00849 Metallo-beta-lactamase superfamily CUC43_01820 SM00849 Metallo-beta-lactamase superfamily CUC43_01830 SM00831 Cation transporter/ATPase, N-terminus CUC43_01875 SM00382 ATPases associated with a variety of cellular activities CUC43_01885 SM00062 Bacterial periplasmic substrate-binding proteins CUC43_01885 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CUC43_01930 SM00861 Transketolase, pyrimidine binding domain CUC43_01950 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CUC43_01965 SM00091 PAS domain CUC43_01965 SM00382 ATPases associated with a variety of cellular activities CUC43_01990 SM00448 cheY-homologous receiver domain CUC43_02000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUC43_02015 SM00363 S4 RNA-binding domain CUC43_02020 SM00861 Transketolase, pyrimidine binding domain CUC43_02055 SM00878 Biotin carboxylase C-terminal domain CUC43_02105 SM00382 ATPases associated with a variety of cellular activities CUC43_02125 SM00841 Elongation factor P, C-terminal CUC43_02125 SM01185 CUC43_02125 CUC43_02160 SM00529 Helix-turn-helix diphteria tox regulatory element CUC43_02195 SM00450 Rhodanese Homology Domain CUC43_02205 SM00354 helix_turn _helix lactose operon repressor CUC43_02260 SM00382 ATPases associated with a variety of cellular activities CUC43_02265 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_02300 SM00487 DEAD-like helicases superfamily CUC43_02300 SM00490 helicase superfamily c-terminal domain CUC43_02340 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CUC43_02375 SM00382 ATPases associated with a variety of cellular activities CUC43_02430 SM01018 B12 binding domain CUC43_02455 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_02465 SM00849 Metallo-beta-lactamase superfamily CUC43_02505 SM00382 ATPases associated with a variety of cellular activities CUC43_02570 SM00382 ATPases associated with a variety of cellular activities CUC43_02585 SM00518 AP endonuclease family 2 CUC43_02590 SM00487 DEAD-like helicases superfamily CUC43_02590 SM00490 helicase superfamily c-terminal domain CUC43_02625 SM00400 zinc finger CUC43_02625 SM00493 CUC43_02625 CUC43_02625 SM00766 DNA primase DnaG DnaB-binding CUC43_02650 SM00116 Domain in cystathionine beta-synthase and other proteins. CUC43_02685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_02730 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_02745 SM00271 DnaJ molecular chaperone homology domain CUC43_02765 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_02775 SM00838 Elongation factor G C-terminus CUC43_02805 SM00849 Metallo-beta-lactamase superfamily CUC43_02815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CUC43_02835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_02845 SM01103 CUC43_02845 CUC43_02900 SM00954 Region found in RelA / SpoT proteins CUC43_02910 SM00098 Alkaline phosphatase homologues CUC43_02940 SM00855 Phosphoglycerate mutase family CUC43_02985 SM00530 Helix-turn-helix XRE-family like proteins CUC43_03010 SM00382 ATPases associated with a variety of cellular activities CUC43_03110 SM00732 Likely ribonuclease with RNase H fold. CUC43_03120 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CUC43_03155 SM00028 Tetratricopeptide repeats CUC43_03175 SM00382 ATPases associated with a variety of cellular activities CUC43_03220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_03220 SM00954 Region found in RelA / SpoT proteins CUC43_03275 SM01323 CUC43_03275 CUC43_03295 SM00382 ATPases associated with a variety of cellular activities CUC43_03300 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CUC43_03320 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_03335 SM00257 Lysin motif CUC43_03390 SM00382 ATPases associated with a variety of cellular activities CUC43_03395 SM00387 Histidine kinase-like ATPases CUC43_03400 SM00448 cheY-homologous receiver domain CUC43_03400 SM00862 Transcriptional regulatory protein, C terminal CUC43_03410 SM01317 CUC43_03410 CUC43_03505 SM00257 Lysin motif CUC43_03515 SM01004 Delta-aminolevulinic acid dehydratase CUC43_03540 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_03555 SM00382 ATPases associated with a variety of cellular activities CUC43_03555 SM00464 Found in ATP-dependent protease La (LON) CUC43_03560 SM00382 ATPases associated with a variety of cellular activities CUC43_03565 SM00382 ATPases associated with a variety of cellular activities CUC43_03565 SM00994 ClpX C4-type zinc finger CUC43_03565 SM01086 C-terminal, D2-small domain, of ClpB protein CUC43_03645 SM00909 Sporulation and spore germination CUC43_03675 SM00421 helix_turn_helix, Lux Regulon CUC43_03695 SM00530 Helix-turn-helix XRE-family like proteins CUC43_03720 SM00382 ATPases associated with a variety of cellular activities CUC43_03775 SM00465 GIY-YIG type nucleases (URI domain) CUC43_03785 SM00893 Electron transfer flavoprotein domain CUC43_03790 SM00893 Electron transfer flavoprotein domain CUC43_03845 SM00382 ATPases associated with a variety of cellular activities CUC43_03850 SM00387 Histidine kinase-like ATPases CUC43_03850 SM00388 His Kinase A (phosphoacceptor) domain CUC43_03855 SM00448 cheY-homologous receiver domain CUC43_03855 SM00862 Transcriptional regulatory protein, C terminal CUC43_03870 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CUC43_03885 SM00382 ATPases associated with a variety of cellular activities CUC43_03900 SM00725 NEAr Transporter domain CUC43_03905 SM00725 NEAr Transporter domain CUC43_03910 SM00725 NEAr Transporter domain CUC43_03920 SM00363 S4 RNA-binding domain CUC43_03930 SM00463 Small MutS-related domain CUC43_03930 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CUC43_03930 SM00534 ATPase domain of DNA mismatch repair MUTS family CUC43_03935 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CUC43_03935 SM00481 DNA polymerase alpha chain like domain CUC43_03935 SM00483 DNA polymerase X family CUC43_03975 SM00873 B3/4 domain CUC43_03975 SM00874 tRNA synthetase B5 domain CUC43_03975 SM00896 Ferredoxin-fold anticodon binding domain CUC43_03985 SM00967 RNA 2'-O ribose methyltransferase substrate binding CUC43_04045 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CUC43_04055 SM00382 ATPases associated with a variety of cellular activities CUC43_04080 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CUC43_04095 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CUC43_04095 SM01232 CUC43_04095 CUC43_04100 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CUC43_04100 SM00474 3'-5' exonuclease CUC43_04100 SM00475 5'-3' exonuclease CUC43_04100 SM00482 DNA polymerase A domain CUC43_04105 SM00091 PAS domain CUC43_04105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_04105 SM00387 Histidine kinase-like ATPases CUC43_04105 SM00388 His Kinase A (phosphoacceptor) domain CUC43_04110 SM00448 cheY-homologous receiver domain CUC43_04110 SM00862 Transcriptional regulatory protein, C terminal CUC43_04135 SM01329 CUC43_04135 CUC43_04185 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_04190 SM00919 Malic enzyme, NAD binding domain CUC43_04190 SM01274 CUC43_04190 CUC43_04195 SM00481 DNA polymerase alpha chain like domain CUC43_04230 SM00116 Domain in cystathionine beta-synthase and other proteins. CUC43_04240 SM00849 Metallo-beta-lactamase superfamily CUC43_04310 SM00530 Helix-turn-helix XRE-family like proteins CUC43_04320 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CUC43_04320 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CUC43_04450 SM00981 CUC43_04450 CUC43_04500 SM00363 S4 RNA-binding domain CUC43_04500 SM01390 CUC43_04500 CUC43_04535 SM00363 S4 RNA-binding domain CUC43_04570 SM00116 Domain in cystathionine beta-synthase and other proteins. CUC43_04590 SM00448 cheY-homologous receiver domain CUC43_04590 SM00862 Transcriptional regulatory protein, C terminal CUC43_04595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_04595 SM00387 Histidine kinase-like ATPases CUC43_04595 SM00388 His Kinase A (phosphoacceptor) domain CUC43_04615 SM00248 ankyrin repeats CUC43_04650 SM00354 helix_turn _helix lactose operon repressor CUC43_04710 SM00422 helix_turn_helix, mercury resistance CUC43_04735 SM00843 CUC43_04735 CUC43_04740 SM00646 CUC43_04740 CUC43_04785 SM00849 Metallo-beta-lactamase superfamily CUC43_04805 SM00642 Alpha-amylase domain CUC43_04825 SM00420 helix_turn_helix, Deoxyribose operon repressor CUC43_04830 SM00363 S4 RNA-binding domain CUC43_04855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_04885 SM01058 CarD-like/TRCF domain CUC43_04920 SM00852 Probable molybdopterin binding domain CUC43_04935 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_04960 SM00450 Rhodanese Homology Domain CUC43_05060 SM00382 ATPases associated with a variety of cellular activities CUC43_05085 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_05095 SM00382 ATPases associated with a variety of cellular activities CUC43_05140 SM00014 Acid phosphatase homologues CUC43_05155 SM00852 Probable molybdopterin binding domain CUC43_05250 SM00387 Histidine kinase-like ATPases CUC43_05255 SM00387 Histidine kinase-like ATPases CUC43_05255 SM00388 His Kinase A (phosphoacceptor) domain CUC43_05285 SM00382 ATPases associated with a variety of cellular activities CUC43_05360 SM01234 CUC43_05360 CUC43_05365 SM00947 Carbonic anhydrase CUC43_05390 SM00894 Excalibur calcium-binding domain CUC43_05450 SM00899 CUC43_05450 CUC43_05470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_05470 SM00387 Histidine kinase-like ATPases CUC43_05470 SM00388 His Kinase A (phosphoacceptor) domain CUC43_05475 SM00448 cheY-homologous receiver domain CUC43_05475 SM00862 Transcriptional regulatory protein, C terminal CUC43_05505 SM00046 Diacylglycerol kinase catalytic domain (presumed) CUC43_05535 SM00382 ATPases associated with a variety of cellular activities CUC43_05590 SM00342 helix_turn_helix, arabinose operon control protein CUC43_05605 SM00382 ATPases associated with a variety of cellular activities CUC43_05610 SM00342 helix_turn_helix, arabinose operon control protein CUC43_05610 SM00871 Bacterial transcription activator, effector binding domain CUC43_05620 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_05625 SM00448 cheY-homologous receiver domain CUC43_05625 SM00862 Transcriptional regulatory protein, C terminal CUC43_05630 SM00387 Histidine kinase-like ATPases CUC43_05645 SM00382 ATPases associated with a variety of cellular activities CUC43_05675 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_05675 SM00866 CUC43_05675 CUC43_05705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_05705 SM00387 Histidine kinase-like ATPases CUC43_05705 SM00388 His Kinase A (phosphoacceptor) domain CUC43_05710 SM00448 cheY-homologous receiver domain CUC43_05710 SM00862 Transcriptional regulatory protein, C terminal CUC43_05715 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUC43_05760 SM00357 Cold shock protein domain CUC43_05805 SM00642 Alpha-amylase domain CUC43_05990 SM00316 Ribosomal protein S1-like RNA-binding domain CUC43_06000 SM00344 helix_turn_helix ASNC type CUC43_06030 SM01298 CUC43_06030 CUC43_06035 SM00479 CUC43_06035 CUC43_06125 SM00871 Bacterial transcription activator, effector binding domain CUC43_06175 SM00644 CUC43_06175 CUC43_06265 SM00507 HNH nucleases CUC43_06300 SM00891 ERCC4 domain CUC43_06315 SM00885 D5 N terminal like CUC43_06355 SM00530 Helix-turn-helix XRE-family like proteins CUC43_06365 SM00530 Helix-turn-helix XRE-family like proteins CUC43_06370 SM00530 Helix-turn-helix XRE-family like proteins CUC43_06440 SM00382 ATPases associated with a variety of cellular activities CUC43_06505 SM00382 ATPases associated with a variety of cellular activities CUC43_06575 SM00422 helix_turn_helix, mercury resistance CUC43_06590 SM00855 Phosphoglycerate mutase family CUC43_06600 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_06660 SM00382 ATPases associated with a variety of cellular activities CUC43_06680 SM00382 ATPases associated with a variety of cellular activities CUC43_06680 SM00930 CUC43_06680 CUC43_06695 SM00493 CUC43_06695 CUC43_06770 SM00530 Helix-turn-helix XRE-family like proteins CUC43_06785 SM00849 Metallo-beta-lactamase superfamily CUC43_06850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_06850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_06935 SM00530 Helix-turn-helix XRE-family like proteins CUC43_06960 SM00448 cheY-homologous receiver domain CUC43_06960 SM00862 Transcriptional regulatory protein, C terminal CUC43_06965 SM00387 Histidine kinase-like ATPases CUC43_06965 SM00388 His Kinase A (phosphoacceptor) domain CUC43_06985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_06985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_06990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_06990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_07010 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_07145 SM00363 S4 RNA-binding domain CUC43_07155 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain CUC43_07160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_07210 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_07220 SM00382 ATPases associated with a variety of cellular activities CUC43_07240 SM00448 cheY-homologous receiver domain CUC43_07240 SM00862 Transcriptional regulatory protein, C terminal CUC43_07260 SM00316 Ribosomal protein S1-like RNA-binding domain CUC43_07260 SM00357 Cold shock protein domain CUC43_07260 SM00955 CUC43_07260 CUC43_07290 SM01192 CUC43_07290 CUC43_07290 SM01193 CUC43_07290 CUC43_07310 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CUC43_07340 SM00382 ATPases associated with a variety of cellular activities CUC43_07345 SM00387 Histidine kinase-like ATPases CUC43_07350 SM00421 helix_turn_helix, Lux Regulon CUC43_07350 SM00448 cheY-homologous receiver domain CUC43_07445 SM00028 Tetratricopeptide repeats CUC43_07485 SM00487 DEAD-like helicases superfamily CUC43_07485 SM00490 helicase superfamily c-terminal domain CUC43_07500 SM00422 helix_turn_helix, mercury resistance CUC43_07525 SM00530 Helix-turn-helix XRE-family like proteins CUC43_07540 SM00422 helix_turn_helix, mercury resistance CUC43_07560 SM00382 ATPases associated with a variety of cellular activities CUC43_07575 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUC43_07575 SM00245 tail specific protease CUC43_07585 SM00382 ATPases associated with a variety of cellular activities CUC43_07600 SM00957 SecA DEAD-like domain CUC43_07600 SM00958 SecA preprotein cross-linking domain CUC43_07610 SM00357 Cold shock protein domain CUC43_07620 SM00487 DEAD-like helicases superfamily CUC43_07620 SM00490 helicase superfamily c-terminal domain CUC43_07660 SM00984 UDP binding domain CUC43_07675 SM00382 ATPases associated with a variety of cellular activities CUC43_07680 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. CUC43_07845 SM00287 Bacterial SH3 domain homologues CUC43_07880 SM00287 Bacterial SH3 domain homologues CUC43_07910 SM00487 DEAD-like helicases superfamily CUC43_07910 SM00490 helicase superfamily c-terminal domain CUC43_07975 SM00382 ATPases associated with a variety of cellular activities CUC43_08000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_08000 SM00387 Histidine kinase-like ATPases CUC43_08000 SM00388 His Kinase A (phosphoacceptor) domain CUC43_08005 SM00448 cheY-homologous receiver domain CUC43_08005 SM00862 Transcriptional regulatory protein, C terminal CUC43_08040 SM00287 Bacterial SH3 domain homologues CUC43_08040 SM00382 ATPases associated with a variety of cellular activities CUC43_08050 SM00984 UDP binding domain CUC43_08115 SM00382 ATPases associated with a variety of cellular activities CUC43_08120 SM00850 LytTr DNA-binding domain CUC43_08205 SM00052 Putative diguanylate phosphodiesterase CUC43_08205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUC43_08205 SM00091 PAS domain CUC43_08205 SM00267 diguanylate cyclase CUC43_08225 SM00382 ATPases associated with a variety of cellular activities CUC43_08295 SM00226 Low molecular weight phosphatase family CUC43_08315 SM00903 Flavin reductase like domain CUC43_08350 SM00937 CUC43_08350 CUC43_08370 SM00357 Cold shock protein domain CUC43_08370 SM00382 ATPases associated with a variety of cellular activities CUC43_08370 SM00959 Rho termination factor, N-terminal domain CUC43_08395 SM00448 cheY-homologous receiver domain CUC43_08445 SM00155 Phospholipase D. Active site motifs. CUC43_08455 SM00052 Putative diguanylate phosphodiesterase CUC43_08455 SM00267 diguanylate cyclase CUC43_08465 SM00530 Helix-turn-helix XRE-family like proteins CUC43_08480 SM00421 helix_turn_helix, Lux Regulon CUC43_08480 SM00448 cheY-homologous receiver domain CUC43_08495 SM00382 ATPases associated with a variety of cellular activities CUC43_08535 SM00836 DALR anticodon binding domain CUC43_08535 SM01016 Arginyl tRNA synthetase N terminal dom CUC43_08575 SM00422 helix_turn_helix, mercury resistance CUC43_08605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_08615 SM00382 ATPases associated with a variety of cellular activities CUC43_08660 SM00936 Penicillin-binding protein 5, C-terminal domain CUC43_08705 SM00986 Uracil DNA glycosylase superfamily CUC43_08705 SM00987 UreE urease accessory protein, C-terminal domain CUC43_08715 SM00382 ATPases associated with a variety of cellular activities CUC43_08725 SM00354 helix_turn _helix lactose operon repressor CUC43_08775 SM00421 helix_turn_helix, Lux Regulon CUC43_08775 SM00448 cheY-homologous receiver domain CUC43_08780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUC43_08790 SM00267 diguanylate cyclase CUC43_08815 SM00448 cheY-homologous receiver domain CUC43_08815 SM00850 LytTr DNA-binding domain CUC43_08845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_08875 SM00382 ATPases associated with a variety of cellular activities CUC43_08935 SM00448 cheY-homologous receiver domain CUC43_08935 SM00850 LytTr DNA-binding domain CUC43_08940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUC43_08940 SM00387 Histidine kinase-like ATPases CUC43_09005 SM00487 DEAD-like helicases superfamily CUC43_09005 SM00490 helicase superfamily c-terminal domain CUC43_09015 SM01240 CUC43_09015 CUC43_09045 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUC43_09050 SM00849 Metallo-beta-lactamase superfamily CUC43_09065 SM00091 PAS domain CUC43_09065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_09065 SM00387 Histidine kinase-like ATPases CUC43_09065 SM00388 His Kinase A (phosphoacceptor) domain CUC43_09070 SM00448 cheY-homologous receiver domain CUC43_09070 SM00862 Transcriptional regulatory protein, C terminal CUC43_09095 SM00788 Adenylosuccinate synthetase CUC43_09110 SM00267 diguanylate cyclase CUC43_09155 SM00470 ParB-like nuclease domain CUC43_09165 SM00470 ParB-like nuclease domain CUC43_09175 SM01228 CUC43_09175 CUC43_09185 SM00393 Putative single-stranded nucleic acids-binding domain CUC43_09185 SM01245 CUC43_09185 CUC43_09205 SM00382 ATPases associated with a variety of cellular activities CUC43_09205 SM00760 Bacterial dnaA protein helix-turn-helix domain CUC43_09210 SM00480 DNA polymerase III beta subunit CUC43_09225 SM00387 Histidine kinase-like ATPases CUC43_09225 SM00433 TopoisomeraseII CUC43_09230 SM00434 DNA Topoisomerase IV CUC43_09265 SM00116 Domain in cystathionine beta-synthase and other proteins. CUC43_09265 SM01240 CUC43_09265 CUC43_09270 SM00936 Penicillin-binding protein 5, C-terminal domain CUC43_09330 SM00382 ATPases associated with a variety of cellular activities CUC43_09340 SM00493 CUC43_09340 CUC43_09425 SM00966 SpoVT / AbrB like domain CUC43_09440 SM00493 CUC43_09440 CUC43_09445 SM00650 Ribosomal RNA adenine dimethylases CUC43_09495 SM01400 CUC43_09495 CUC43_09510 SM00487 DEAD-like helicases superfamily CUC43_09510 SM00490 helicase superfamily c-terminal domain CUC43_09510 SM00982 CUC43_09510 CUC43_09510 SM01058 CarD-like/TRCF domain CUC43_09515 SM00966 SpoVT / AbrB like domain CUC43_09530 SM00363 S4 RNA-binding domain CUC43_09550 SM00316 Ribosomal protein S1-like RNA-binding domain CUC43_09565 SM00331 Sigma factor PP2C-like phosphatases CUC43_09565 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CUC43_09570 SM00977 TilS substrate C-terminal domain CUC43_09580 SM00382 ATPases associated with a variety of cellular activities CUC43_09620 SM00905 Dihydroneopterin aldolase CUC43_09630 SM00530 Helix-turn-helix XRE-family like proteins CUC43_09735 SM00382 ATPases associated with a variety of cellular activities CUC43_09735 SM01086 C-terminal, D2-small domain, of ClpB protein CUC43_09740 SM00382 ATPases associated with a variety of cellular activities CUC43_09750 SM00670 Large family of predicted nucleotide-binding domains CUC43_09775 SM00840 CUC43_09775 CUC43_09780 SM00535 Ribonuclease III family CUC43_09785 SM00967 RNA 2'-O ribose methyltransferase substrate binding CUC43_09795 SM00421 helix_turn_helix, Lux Regulon CUC43_09810 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CUC43_09815 SM00649 Ribosomal protein L11/L12 CUC43_09845 SM00663 RNA polymerase I subunit A N-terminus CUC43_09865 SM00838 Elongation factor G C-terminus CUC43_09865 SM00889 Elongation factor G, domain IV CUC43_09880 SM01403 CUC43_09880 CUC43_09900 SM01382 CUC43_09900 CUC43_09900 SM01383 CUC43_09900 CUC43_09915 SM00322 K homology RNA-binding domain CUC43_09935 SM01374 CUC43_09935 CUC43_09940 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CUC43_10000 SM00316 Ribosomal protein S1-like RNA-binding domain CUC43_10020 SM00662 RNA polymerases D CUC43_10030 SM00382 ATPases associated with a variety of cellular activities CUC43_10035 SM00382 ATPases associated with a variety of cellular activities CUC43_10065 SM00646 CUC43_10065 CUC43_10080 SM01251 CUC43_10080 CUC43_10200 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_10200 SM00895 CUC43_10200 CUC43_10215 SM01350 CUC43_10215 CUC43_10260 SM00382 ATPases associated with a variety of cellular activities CUC43_10260 SM00930 CUC43_10260 CUC43_10270 SM00829 Enoylreductase CUC43_10320 SM00382 ATPases associated with a variety of cellular activities CUC43_10325 SM00382 ATPases associated with a variety of cellular activities CUC43_10440 SM00563 Phosphate acyltransferases CUC43_10450 SM00354 helix_turn _helix lactose operon repressor CUC43_10510 SM00382 ATPases associated with a variety of cellular activities CUC43_10515 SM00387 Histidine kinase-like ATPases CUC43_10520 SM00421 helix_turn_helix, Lux Regulon CUC43_10520 SM00448 cheY-homologous receiver domain CUC43_10525 SM00382 ATPases associated with a variety of cellular activities CUC43_10565 SM00382 ATPases associated with a variety of cellular activities CUC43_10570 SM00382 ATPases associated with a variety of cellular activities CUC43_10650 SM00487 DEAD-like helicases superfamily CUC43_10650 SM00490 helicase superfamily c-terminal domain CUC43_10675 SM01005 Alanine racemase, C-terminal domain CUC43_10690 SM00316 Ribosomal protein S1-like RNA-binding domain CUC43_10690 SM00732 Likely ribonuclease with RNase H fold. CUC43_10700 SM00731 SprT homologues. CUC43_10805 SM00382 ATPases associated with a variety of cellular activities CUC43_10810 SM00881 CoA binding domain CUC43_10825 SM00883 Chaperonin 10 Kd subunit CUC43_10840 SM00860 SMI1 / KNR4 family CUC43_10855 SM00448 cheY-homologous receiver domain CUC43_10855 SM00862 Transcriptional regulatory protein, C terminal CUC43_10860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_10860 SM00387 Histidine kinase-like ATPases CUC43_10860 SM00388 His Kinase A (phosphoacceptor) domain CUC43_10975 SM00382 ATPases associated with a variety of cellular activities CUC43_10980 SM00387 Histidine kinase-like ATPases CUC43_10980 SM00388 His Kinase A (phosphoacceptor) domain CUC43_10985 SM00448 cheY-homologous receiver domain CUC43_10985 SM00862 Transcriptional regulatory protein, C terminal CUC43_11030 SM01001 AIR carboxylase CUC43_11040 SM00998 Adenylosuccinate lyase C-terminus CUC43_11055 SM01211 CUC43_11055 CUC43_11080 SM00798 AICARFT/IMPCHase bienzyme CUC43_11080 SM00851 MGS-like domain CUC43_11085 SM01209 CUC43_11085 CUC43_11085 SM01210 CUC43_11085 CUC43_11095 SM00244 prohibitin homologues CUC43_11120 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CUC43_11120 SM00292 breast cancer carboxy-terminal domain CUC43_11120 SM00532 Ligase N family CUC43_11155 SM00382 ATPases associated with a variety of cellular activities CUC43_11155 SM00930 CUC43_11155 CUC43_11195 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_11215 SM00845 GatB domain CUC43_11220 SM00046 Diacylglycerol kinase catalytic domain (presumed) CUC43_11235 SM00382 ATPases associated with a variety of cellular activities CUC43_11300 SM00530 Helix-turn-helix XRE-family like proteins CUC43_11310 SM00530 Helix-turn-helix XRE-family like proteins CUC43_11315 SM00530 Helix-turn-helix XRE-family like proteins CUC43_11355 SM00966 SpoVT / AbrB like domain CUC43_11445 SM00843 CUC43_11445 CUC43_11465 SM00507 HNH nucleases CUC43_11595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUC43_11595 SM00387 Histidine kinase-like ATPases CUC43_11595 SM00388 His Kinase A (phosphoacceptor) domain CUC43_11610 SM00028 Tetratricopeptide repeats CUC43_11625 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUC43_11675 SM01007 Class II Aldolase and Adducin N-terminal domain CUC43_11795 SM00062 Bacterial periplasmic substrate-binding proteins CUC43_11795 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CUC43_11800 SM00382 ATPases associated with a variety of cellular activities CUC43_11805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_11805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_11815 SM00642 Alpha-amylase domain CUC43_11835 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CUC43_11835 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CUC43_11835 SM00493 CUC43_11835 CUC43_11860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_11860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_11880 SM00382 ATPases associated with a variety of cellular activities CUC43_11905 SM00060 Fibronectin type 3 domain CUC43_11905 SM00636 CUC43_11905 CUC43_11905 SM00637 CUC43_11905 CUC43_11940 SM00530 Helix-turn-helix XRE-family like proteins CUC43_11965 SM00946 Prolyl-tRNA synthetase, C-terminal CUC43_12010 SM00831 Cation transporter/ATPase, N-terminus CUC43_12020 SM00226 Low molecular weight phosphatase family CUC43_12115 SM00478 endonuclease III CUC43_12135 SM00382 ATPases associated with a variety of cellular activities CUC43_12155 SM00530 Helix-turn-helix XRE-family like proteins CUC43_12220 SM00984 UDP binding domain CUC43_12305 SM00478 endonuclease III CUC43_12305 SM00525 CUC43_12305 CUC43_12330 SM00382 ATPases associated with a variety of cellular activities CUC43_12350 SM00382 ATPases associated with a variety of cellular activities CUC43_12490 SM00465 GIY-YIG type nucleases (URI domain) CUC43_12495 SM00530 Helix-turn-helix XRE-family like proteins CUC43_12520 SM00857 Resolvase, N terminal domain CUC43_12620 SM00567 E-Z type HEAT repeats CUC43_12635 SM00052 Putative diguanylate phosphodiesterase CUC43_12635 SM00091 PAS domain CUC43_12635 SM00267 diguanylate cyclase CUC43_12645 SM00763 PrkA AAA domain CUC43_12660 SM00365 Leucine-rich repeat, SDS22-like subfamily CUC43_12660 SM00725 NEAr Transporter domain CUC43_12675 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CUC43_12685 SM00244 prohibitin homologues CUC43_12690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_12690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_12695 SM00091 PAS domain CUC43_12695 SM00387 Histidine kinase-like ATPases CUC43_12700 SM00448 cheY-homologous receiver domain CUC43_12720 SM00248 ankyrin repeats CUC43_12735 SM00382 ATPases associated with a variety of cellular activities CUC43_12770 SM00448 cheY-homologous receiver domain CUC43_12770 SM00862 Transcriptional regulatory protein, C terminal CUC43_12775 SM00387 Histidine kinase-like ATPases CUC43_12775 SM00388 His Kinase A (phosphoacceptor) domain CUC43_12790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_12790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_12795 SM00387 Histidine kinase-like ATPases CUC43_12800 SM00448 cheY-homologous receiver domain CUC43_12810 SM00919 Malic enzyme, NAD binding domain CUC43_12810 SM01274 CUC43_12810 CUC43_12825 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_12835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_12835 SM00387 Histidine kinase-like ATPases CUC43_12835 SM00388 His Kinase A (phosphoacceptor) domain CUC43_12840 SM00448 cheY-homologous receiver domain CUC43_12840 SM00862 Transcriptional regulatory protein, C terminal CUC43_12860 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CUC43_12860 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CUC43_12875 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CUC43_12875 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CUC43_12885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_12900 SM00028 Tetratricopeptide repeats CUC43_12900 SM00530 Helix-turn-helix XRE-family like proteins CUC43_12945 SM01091 Transporter associated domain CUC43_12965 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_12995 SM00382 ATPases associated with a variety of cellular activities CUC43_13025 SM00327 von Willebrand factor (vWF) type A domain CUC43_13030 SM00382 ATPases associated with a variety of cellular activities CUC43_13035 SM00155 Phospholipase D. Active site motifs. CUC43_13050 SM00052 Putative diguanylate phosphodiesterase CUC43_13050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUC43_13050 SM00267 diguanylate cyclase CUC43_13060 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_13060 SM00866 CUC43_13060 CUC43_13070 SM00642 Alpha-amylase domain CUC43_13090 SM00387 Histidine kinase-like ATPases CUC43_13095 SM00421 helix_turn_helix, Lux Regulon CUC43_13095 SM00448 cheY-homologous receiver domain CUC43_13140 SM00382 ATPases associated with a variety of cellular activities CUC43_13145 SM00062 Bacterial periplasmic substrate-binding proteins CUC43_13145 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CUC43_13200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_13200 SM00387 Histidine kinase-like ATPases CUC43_13200 SM00388 His Kinase A (phosphoacceptor) domain CUC43_13205 SM00448 cheY-homologous receiver domain CUC43_13205 SM00862 Transcriptional regulatory protein, C terminal CUC43_13245 SM00382 ATPases associated with a variety of cellular activities CUC43_13250 SM00382 ATPases associated with a variety of cellular activities CUC43_13260 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_13270 SM00354 helix_turn _helix lactose operon repressor CUC43_13285 SM00382 ATPases associated with a variety of cellular activities CUC43_13325 SM00829 Enoylreductase CUC43_13335 SM00770 Zinc dependent phospholipase C (alpha toxin) CUC43_13370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_13380 SM00530 Helix-turn-helix XRE-family like proteins CUC43_13420 SM00382 ATPases associated with a variety of cellular activities CUC43_13450 SM00530 Helix-turn-helix XRE-family like proteins CUC43_13550 SM00899 CUC43_13550 CUC43_13700 SM00116 Domain in cystathionine beta-synthase and other proteins. CUC43_13740 SM00382 ATPases associated with a variety of cellular activities CUC43_13835 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_13940 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_13955 SM00450 Rhodanese Homology Domain CUC43_13965 SM00450 Rhodanese Homology Domain CUC43_13970 SM00450 Rhodanese Homology Domain CUC43_13970 SM00849 Metallo-beta-lactamase superfamily CUC43_13980 SM00450 Rhodanese Homology Domain CUC43_13985 SM00450 Rhodanese Homology Domain CUC43_14010 SM00829 Enoylreductase CUC43_14065 SM00287 Bacterial SH3 domain homologues CUC43_14075 SM00382 ATPases associated with a variety of cellular activities CUC43_14130 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CUC43_14220 SM00344 helix_turn_helix ASNC type CUC43_14295 SM01060 CUC43_14295 CUC43_14340 SM00382 ATPases associated with a variety of cellular activities CUC43_14345 SM00382 ATPases associated with a variety of cellular activities CUC43_14355 SM00062 Bacterial periplasmic substrate-binding proteins CUC43_14355 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CUC43_14365 SM00382 ATPases associated with a variety of cellular activities CUC43_14435 SM00644 CUC43_14435 CUC43_14445 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_14560 SM00646 CUC43_14560 CUC43_14675 SM00287 Bacterial SH3 domain homologues CUC43_14675 SM00644 CUC43_14675 CUC43_14695 SM00530 Helix-turn-helix XRE-family like proteins CUC43_14735 SM00091 PAS domain CUC43_14735 SM00387 Histidine kinase-like ATPases CUC43_14740 SM00448 cheY-homologous receiver domain CUC43_14800 SM00487 DEAD-like helicases superfamily CUC43_14890 SM00091 PAS domain CUC43_14890 SM00382 ATPases associated with a variety of cellular activities CUC43_15010 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_15055 SM01120 CUC43_15055 CUC43_15105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_15130 SM00460 Transglutaminase/protease-like homologues CUC43_15175 SM00382 ATPases associated with a variety of cellular activities CUC43_15250 SM00331 Sigma factor PP2C-like phosphatases CUC43_15250 SM00448 cheY-homologous receiver domain CUC43_15255 SM00138 Methyltransferase, chemotaxis proteins CUC43_15260 SM00387 Histidine kinase-like ATPases CUC43_15260 SM00388 His Kinase A (phosphoacceptor) domain CUC43_15260 SM00448 cheY-homologous receiver domain CUC43_15305 SM00829 Enoylreductase CUC43_15345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_15415 SM00028 Tetratricopeptide repeats CUC43_15505 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_15580 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_15600 SM00382 ATPases associated with a variety of cellular activities CUC43_15685 SM00422 helix_turn_helix, mercury resistance CUC43_15790 SM00354 helix_turn _helix lactose operon repressor CUC43_15800 SM00849 Metallo-beta-lactamase superfamily CUC43_15835 SM00725 NEAr Transporter domain CUC43_15885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_15920 SM00342 helix_turn_helix, arabinose operon control protein CUC43_15920 SM00871 Bacterial transcription activator, effector binding domain CUC43_15925 SM00387 Histidine kinase-like ATPases CUC43_15925 SM00388 His Kinase A (phosphoacceptor) domain CUC43_15930 SM00448 cheY-homologous receiver domain CUC43_15930 SM00862 Transcriptional regulatory protein, C terminal CUC43_15995 SM00357 Cold shock protein domain CUC43_16120 SM01060 CUC43_16120 CUC43_16135 SM00642 Alpha-amylase domain CUC43_16150 SM00530 Helix-turn-helix XRE-family like proteins CUC43_16165 SM00316 Ribosomal protein S1-like RNA-binding domain CUC43_16210 SM00382 ATPases associated with a variety of cellular activities CUC43_16210 SM01086 C-terminal, D2-small domain, of ClpB protein CUC43_16245 SM00825 Beta-ketoacyl synthase CUC43_16290 SM00382 ATPases associated with a variety of cellular activities CUC43_16295 SM00382 ATPases associated with a variety of cellular activities CUC43_16335 SM00155 Phospholipase D. Active site motifs. CUC43_16365 SM01118 CUC43_16365 CUC43_16375 SM00954 Region found in RelA / SpoT proteins CUC43_16615 SM01324 CUC43_16615 CUC43_16670 SM00861 Transketolase, pyrimidine binding domain CUC43_16675 SM00530 Helix-turn-helix XRE-family like proteins CUC43_16855 SM00530 Helix-turn-helix XRE-family like proteins CUC43_16875 SM00382 ATPases associated with a variety of cellular activities CUC43_16895 SM00014 Acid phosphatase homologues CUC43_16945 SM00448 cheY-homologous receiver domain CUC43_16945 SM00862 Transcriptional regulatory protein, C terminal CUC43_16950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_16950 SM00387 Histidine kinase-like ATPases CUC43_16950 SM00388 His Kinase A (phosphoacceptor) domain CUC43_16955 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_16955 SM00895 CUC43_16955 CUC43_17025 SM00822 CUC43_17025 CUC43_17065 SM00382 ATPases associated with a variety of cellular activities CUC43_17090 SM00420 helix_turn_helix, Deoxyribose operon repressor CUC43_17090 SM01134 CUC43_17090 CUC43_17105 SM01007 Class II Aldolase and Adducin N-terminal domain CUC43_17125 SM00387 Histidine kinase-like ATPases CUC43_17125 SM00388 His Kinase A (phosphoacceptor) domain CUC43_17130 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_17150 SM00387 Histidine kinase-like ATPases CUC43_17150 SM00388 His Kinase A (phosphoacceptor) domain CUC43_17230 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_17235 SM00382 ATPases associated with a variety of cellular activities CUC43_17245 SM00382 ATPases associated with a variety of cellular activities CUC43_17265 SM00344 helix_turn_helix ASNC type CUC43_17390 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_17470 SM00917 LeuA allosteric (dimerisation) domain CUC43_17475 SM01329 CUC43_17475 CUC43_17565 SM00530 Helix-turn-helix XRE-family like proteins CUC43_17575 SM00530 Helix-turn-helix XRE-family like proteins CUC43_17580 SM00530 Helix-turn-helix XRE-family like proteins CUC43_17705 SM00843 CUC43_17705 CUC43_17725 SM00507 HNH nucleases CUC43_17825 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CUC43_17825 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CUC43_17840 SM00966 SpoVT / AbrB like domain CUC43_17850 SM00411 bacterial (prokaryotic) histone like domain CUC43_17870 SM00823 Phosphopantetheine attachment site CUC43_17910 SM00382 ATPases associated with a variety of cellular activities CUC43_17950 SM00644 CUC43_17950 CUC43_18075 SM00387 Histidine kinase-like ATPases CUC43_18080 SM00421 helix_turn_helix, Lux Regulon CUC43_18080 SM00448 cheY-homologous receiver domain CUC43_18175 SM00091 PAS domain CUC43_18175 SM00387 Histidine kinase-like ATPases CUC43_18175 SM00388 His Kinase A (phosphoacceptor) domain CUC43_18195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_18195 SM00387 Histidine kinase-like ATPases CUC43_18195 SM00388 His Kinase A (phosphoacceptor) domain CUC43_18245 SM00363 S4 RNA-binding domain CUC43_18265 SM00448 cheY-homologous receiver domain CUC43_18265 SM00862 Transcriptional regulatory protein, C terminal CUC43_18270 SM00091 PAS domain CUC43_18270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_18270 SM00387 Histidine kinase-like ATPases CUC43_18270 SM00388 His Kinase A (phosphoacceptor) domain CUC43_18280 SM00257 Lysin motif CUC43_18305 SM00487 DEAD-like helicases superfamily CUC43_18305 SM00490 helicase superfamily c-terminal domain CUC43_18315 SM00257 Lysin motif CUC43_18325 SM00422 helix_turn_helix, mercury resistance CUC43_18335 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CUC43_18350 SM00644 CUC43_18350 CUC43_18360 SM00870 CUC43_18360 CUC43_18375 SM00316 Ribosomal protein S1-like RNA-binding domain CUC43_18435 SM00411 bacterial (prokaryotic) histone like domain CUC43_18460 SM00562 CUC43_18460 CUC43_18480 SM00028 Tetratricopeptide repeats CUC43_18485 SM00914 CUC43_18485 CUC43_18535 SM00986 Uracil DNA glycosylase superfamily CUC43_18535 SM00987 UreE urease accessory protein, C-terminal domain CUC43_18615 SM00479 CUC43_18615 CUC43_18615 SM00491 CUC43_18615 CUC43_18640 SM00478 endonuclease III CUC43_18640 SM00525 CUC43_18640 CUC43_18650 SM00060 Fibronectin type 3 domain CUC43_18710 SM00981 CUC43_18710 CUC43_18720 SM00491 CUC43_18720 CUC43_18780 SM00450 Rhodanese Homology Domain CUC43_18820 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CUC43_18820 SM00475 5'-3' exonuclease CUC43_18885 SM00357 Cold shock protein domain CUC43_18940 SM00849 Metallo-beta-lactamase superfamily CUC43_18945 SM00422 helix_turn_helix, mercury resistance CUC43_18945 SM00871 Bacterial transcription activator, effector binding domain CUC43_19010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_19055 SM00448 cheY-homologous receiver domain CUC43_19060 SM00073 Histidine Phosphotransfer domain CUC43_19060 SM00260 Two component signalling adaptor domain CUC43_19060 SM00387 Histidine kinase-like ATPases CUC43_19060 SM01231 CUC43_19060 CUC43_19080 SM00138 Methyltransferase, chemotaxis proteins CUC43_19155 SM00382 ATPases associated with a variety of cellular activities CUC43_19190 SM00260 Two component signalling adaptor domain CUC43_19190 SM00448 cheY-homologous receiver domain CUC43_19260 SM00382 ATPases associated with a variety of cellular activities CUC43_19260 SM00962 SRP54-type protein, GTPase domain CUC43_19270 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CUC43_19345 SM00530 Helix-turn-helix XRE-family like proteins CUC43_19370 SM00382 ATPases associated with a variety of cellular activities CUC43_19410 SM00835 Cupin CUC43_19435 SM00855 Phosphoglycerate mutase family CUC43_19450 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_19490 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_19490 SM00895 CUC43_19490 CUC43_19575 SM00530 Helix-turn-helix XRE-family like proteins CUC43_19615 SM00421 helix_turn_helix, Lux Regulon CUC43_19615 SM00448 cheY-homologous receiver domain CUC43_19625 SM00382 ATPases associated with a variety of cellular activities CUC43_19640 SM00155 Phospholipase D. Active site motifs. CUC43_19660 SM00919 Malic enzyme, NAD binding domain CUC43_19660 SM01274 CUC43_19660 CUC43_19665 SM00387 Histidine kinase-like ATPases CUC43_19670 SM00448 cheY-homologous receiver domain CUC43_19675 SM00487 DEAD-like helicases superfamily CUC43_19675 SM00490 helicase superfamily c-terminal domain CUC43_19750 SM00047 Lysozyme subfamily 2 CUC43_19940 SM00854 Bacterial capsule synthesis protein PGA_cap CUC43_19970 SM00850 LytTr DNA-binding domain CUC43_20000 SM00860 SMI1 / KNR4 family CUC43_20045 SM00448 cheY-homologous receiver domain CUC43_20045 SM00862 Transcriptional regulatory protein, C terminal CUC43_20050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_20050 SM00387 Histidine kinase-like ATPases CUC43_20050 SM00388 His Kinase A (phosphoacceptor) domain CUC43_20065 SM00450 Rhodanese Homology Domain CUC43_20135 SM01133 CUC43_20135 CUC43_20145 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CUC43_20170 SM01011 Aminopeptidase P, N-terminal domain CUC43_20185 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CUC43_20185 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CUC43_20185 SM00493 CUC43_20185 CUC43_20365 SM00849 Metallo-beta-lactamase superfamily CUC43_20405 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_20405 SM00866 CUC43_20405 CUC43_20440 SM00914 CUC43_20440 CUC43_20485 SM00028 Tetratricopeptide repeats CUC43_20585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_20585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_20590 SM01276 CUC43_20590 CUC43_20615 SM00829 Enoylreductase CUC43_20625 SM00422 helix_turn_helix, mercury resistance CUC43_20635 SM00829 Enoylreductase CUC43_20650 SM00861 Transketolase, pyrimidine binding domain CUC43_20655 SM01350 CUC43_20655 CUC43_20730 SM00422 helix_turn_helix, mercury resistance CUC43_20735 SM01091 Transporter associated domain CUC43_20815 SM01266 CUC43_20815 CUC43_20870 SM00530 Helix-turn-helix XRE-family like proteins CUC43_20885 SM00382 ATPases associated with a variety of cellular activities CUC43_20960 SM00530 Helix-turn-helix XRE-family like proteins CUC43_21010 SM00382 ATPases associated with a variety of cellular activities CUC43_21085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_21095 SM00382 ATPases associated with a variety of cellular activities CUC43_21120 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_21145 SM00854 Bacterial capsule synthesis protein PGA_cap CUC43_21185 SM00644 CUC43_21185 CUC43_21200 SM00342 helix_turn_helix, arabinose operon control protein CUC43_21310 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_21320 SM00448 cheY-homologous receiver domain CUC43_21320 SM00862 Transcriptional regulatory protein, C terminal CUC43_21325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_21325 SM00387 Histidine kinase-like ATPases CUC43_21325 SM00388 His Kinase A (phosphoacceptor) domain CUC43_21340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_21350 SM00382 ATPases associated with a variety of cellular activities CUC43_21385 SM00849 Metallo-beta-lactamase superfamily CUC43_21500 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_21560 SM00344 helix_turn_helix ASNC type CUC43_21620 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_21635 SM00226 Low molecular weight phosphatase family CUC43_21655 SM00421 helix_turn_helix, Lux Regulon CUC43_21655 SM00448 cheY-homologous receiver domain CUC43_21670 SM00382 ATPases associated with a variety of cellular activities CUC43_21900 SM00387 Histidine kinase-like ATPases CUC43_21905 SM00448 cheY-homologous receiver domain CUC43_21950 SM00530 Helix-turn-helix XRE-family like proteins CUC43_21955 SM00870 CUC43_21955 CUC43_21990 SM00849 Metallo-beta-lactamase superfamily CUC43_22060 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_22080 SM00346 helix_turn_helix isocitrate lyase regulation CUC43_22085 SM00796 Allophanate hydrolase subunit 1 CUC43_22090 SM00797 Allophanate hydrolase subunit 2 CUC43_22225 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_22250 SM00342 helix_turn_helix, arabinose operon control protein CUC43_22250 SM00871 Bacterial transcription activator, effector binding domain CUC43_22275 SM00382 ATPases associated with a variety of cellular activities CUC43_22285 SM00773 Proposed nucleic acid binding domain CUC43_22300 SM00889 Elongation factor G, domain IV CUC43_22310 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_22325 SM00382 ATPases associated with a variety of cellular activities CUC43_22360 SM01060 CUC43_22360 CUC43_22425 SM00850 LytTr DNA-binding domain CUC43_22450 SM00530 Helix-turn-helix XRE-family like proteins CUC43_22460 SM00098 Alkaline phosphatase homologues CUC43_22495 SM00346 helix_turn_helix isocitrate lyase regulation CUC43_22515 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CUC43_22535 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_22580 SM01133 CUC43_22580 CUC43_22600 SM00382 ATPases associated with a variety of cellular activities CUC43_22640 SM00287 Bacterial SH3 domain homologues CUC43_22675 SM00830 Chorismate mutase type II CUC43_22725 SM00382 ATPases associated with a variety of cellular activities CUC43_22830 SM00028 Tetratricopeptide repeats CUC43_22860 SM00382 ATPases associated with a variety of cellular activities CUC43_22865 SM00062 Bacterial periplasmic substrate-binding proteins CUC43_22940 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_22945 SM00382 ATPases associated with a variety of cellular activities CUC43_23165 SM00448 cheY-homologous receiver domain CUC43_23165 SM00862 Transcriptional regulatory protein, C terminal CUC43_23170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_23170 SM00387 Histidine kinase-like ATPases CUC43_23170 SM00388 His Kinase A (phosphoacceptor) domain CUC43_23175 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CUC43_23225 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUC43_23245 SM00530 Helix-turn-helix XRE-family like proteins CUC43_23320 SM00091 PAS domain CUC43_23320 SM00382 ATPases associated with a variety of cellular activities CUC43_23340 SM01130 CUC43_23340 CUC43_23360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_23375 SM01131 CUC43_23375 CUC43_23425 SM00341 Helicase and RNase D C-terminal CUC43_23425 SM00487 DEAD-like helicases superfamily CUC43_23425 SM00490 helicase superfamily c-terminal domain CUC43_23425 SM00956 CUC43_23425 CUC43_23455 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_23490 SM00849 Metallo-beta-lactamase superfamily CUC43_23530 SM00060 Fibronectin type 3 domain CUC43_23530 SM00495 Chitin-binding domain type 3 CUC43_23565 SM00116 Domain in cystathionine beta-synthase and other proteins. CUC43_23565 SM00382 ATPases associated with a variety of cellular activities CUC43_23635 SM00861 Transketolase, pyrimidine binding domain CUC43_23675 SM00420 helix_turn_helix, Deoxyribose operon repressor CUC43_23675 SM01134 CUC43_23675 CUC43_23695 SM00382 ATPases associated with a variety of cellular activities CUC43_23720 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUC43_23825 SM00829 Enoylreductase CUC43_23860 SM00871 Bacterial transcription activator, effector binding domain CUC43_23880 SM00642 Alpha-amylase domain CUC43_23885 SM00014 Acid phosphatase homologues CUC43_23965 SM00465 GIY-YIG type nucleases (URI domain) CUC43_24055 SM00480 DNA polymerase III beta subunit CUC43_24115 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_24155 SM00422 helix_turn_helix, mercury resistance CUC43_24200 SM00740 CUC43_24200 CUC43_24205 SM00014 Acid phosphatase homologues CUC43_24210 SM00829 Enoylreductase CUC43_24215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_24215 SM00387 Histidine kinase-like ATPases CUC43_24215 SM00388 His Kinase A (phosphoacceptor) domain CUC43_24220 SM00448 cheY-homologous receiver domain CUC43_24220 SM00862 Transcriptional regulatory protein, C terminal CUC43_24240 SM00387 Histidine kinase-like ATPases CUC43_24240 SM00388 His Kinase A (phosphoacceptor) domain CUC43_24255 SM00382 ATPases associated with a variety of cellular activities CUC43_24275 SM00014 Acid phosphatase homologues CUC43_24285 SM00507 HNH nucleases CUC43_24290 SM00530 Helix-turn-helix XRE-family like proteins CUC43_24455 SM00091 PAS domain CUC43_24455 SM00387 Histidine kinase-like ATPases CUC43_24455 SM00388 His Kinase A (phosphoacceptor) domain CUC43_24565 SM01209 CUC43_24565 CUC43_24570 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_24600 SM00382 ATPases associated with a variety of cellular activities CUC43_24615 SM00382 ATPases associated with a variety of cellular activities CUC43_24630 SM00387 Histidine kinase-like ATPases CUC43_24635 SM00448 cheY-homologous receiver domain CUC43_24635 SM00862 Transcriptional regulatory protein, C terminal CUC43_24715 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_24730 SM00342 helix_turn_helix, arabinose operon control protein CUC43_24790 SM00422 helix_turn_helix, mercury resistance CUC43_24790 SM00871 Bacterial transcription activator, effector binding domain CUC43_24810 SM00382 ATPases associated with a variety of cellular activities CUC43_24865 SM00448 cheY-homologous receiver domain CUC43_24865 SM00862 Transcriptional regulatory protein, C terminal CUC43_24870 SM00387 Histidine kinase-like ATPases CUC43_24870 SM00388 His Kinase A (phosphoacceptor) domain CUC43_24930 SM00878 Biotin carboxylase C-terminal domain CUC43_24965 SM00382 ATPases associated with a variety of cellular activities CUC43_24980 SM00450 Rhodanese Homology Domain CUC43_24980 SM00849 Metallo-beta-lactamase superfamily CUC43_25020 SM00028 Tetratricopeptide repeats CUC43_25060 SM00052 Putative diguanylate phosphodiesterase CUC43_25060 SM00091 PAS domain CUC43_25060 SM00267 diguanylate cyclase CUC43_25095 SM00849 Metallo-beta-lactamase superfamily CUC43_25130 SM00257 Lysin motif CUC43_25190 SM00354 helix_turn _helix lactose operon repressor CUC43_25195 SM00014 Acid phosphatase homologues CUC43_25245 SM00936 Penicillin-binding protein 5, C-terminal domain CUC43_25290 SM00855 Phosphoglycerate mutase family CUC43_25295 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_25315 SM00382 ATPases associated with a variety of cellular activities CUC43_25345 SM00487 DEAD-like helicases superfamily CUC43_25345 SM00490 helicase superfamily c-terminal domain CUC43_25360 SM00849 Metallo-beta-lactamase superfamily CUC43_25385 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_25400 SM01207 CUC43_25400 CUC43_25475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_25480 SM00835 Cupin CUC43_25505 SM00530 Helix-turn-helix XRE-family like proteins CUC43_25515 SM00646 CUC43_25515 CUC43_25525 SM00382 ATPases associated with a variety of cellular activities CUC43_25530 SM00382 ATPases associated with a variety of cellular activities CUC43_25595 SM00857 Resolvase, N terminal domain CUC43_25635 SM00530 Helix-turn-helix XRE-family like proteins CUC43_25660 SM00646 CUC43_25660 CUC43_25790 SM00857 Resolvase, N terminal domain CUC43_25830 SM00966 SpoVT / AbrB like domain CUC43_25890 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains CUC43_25920 SM00482 DNA polymerase A domain CUC43_25945 SM00487 DEAD-like helicases superfamily CUC43_25945 SM00490 helicase superfamily c-terminal domain CUC43_26000 SM00530 Helix-turn-helix XRE-family like proteins CUC43_26005 SM00530 Helix-turn-helix XRE-family like proteins CUC43_26020 SM00530 Helix-turn-helix XRE-family like proteins CUC43_26030 SM00357 Cold shock protein domain CUC43_26070 SM00530 Helix-turn-helix XRE-family like proteins CUC43_26095 SM01059 Chloramphenicol acetyltransferase CUC43_26115 SM00849 Metallo-beta-lactamase superfamily CUC43_26125 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_26155 SM00849 Metallo-beta-lactamase superfamily CUC43_26205 SM00382 ATPases associated with a variety of cellular activities CUC43_26215 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CUC43_26220 SM00363 S4 RNA-binding domain CUC43_26265 SM00411 bacterial (prokaryotic) histone like domain CUC43_26285 SM00923 MbtH-like protein CUC43_26290 SM00823 Phosphopantetheine attachment site CUC43_26290 SM00824 Thioesterase CUC43_26330 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_26550 SM00014 Acid phosphatase homologues CUC43_26560 SM00219 Tyrosine kinase, catalytic domain CUC43_26600 SM00382 ATPases associated with a variety of cellular activities CUC43_26615 SM00882 Coenzyme A transferase CUC43_26620 SM00882 Coenzyme A transferase CUC43_26640 SM00387 Histidine kinase-like ATPases CUC43_26640 SM00388 His Kinase A (phosphoacceptor) domain CUC43_26655 SM01091 Transporter associated domain CUC43_26695 SM00382 ATPases associated with a variety of cellular activities CUC43_26750 SM00829 Enoylreductase CUC43_26765 SM00421 helix_turn_helix, Lux Regulon CUC43_26765 SM00448 cheY-homologous receiver domain CUC43_26770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUC43_26875 SM00563 Phosphate acyltransferases CUC43_26910 SM00245 tail specific protease CUC43_26940 SM00382 ATPases associated with a variety of cellular activities CUC43_26975 SM00857 Resolvase, N terminal domain CUC43_27035 SM00248 ankyrin repeats CUC43_27085 SM00857 Resolvase, N terminal domain CUC43_27135 SM00028 Tetratricopeptide repeats CUC43_27145 SM00382 ATPases associated with a variety of cellular activities CUC43_27160 SM00327 von Willebrand factor (vWF) type A domain CUC43_27215 SM00028 Tetratricopeptide repeats CUC43_27225 SM00836 DALR anticodon binding domain CUC43_27225 SM01016 Arginyl tRNA synthetase N terminal dom CUC43_27245 SM00567 E-Z type HEAT repeats CUC43_27245 SM00932 Scaffold protein Nfu/NifU N terminal CUC43_27270 SM00382 ATPases associated with a variety of cellular activities CUC43_27275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_27410 SM00852 Probable molybdopterin binding domain CUC43_27420 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_27425 SM00100 Cyclic nucleotide-monophosphate binding domain CUC43_27425 SM00419 helix_turn_helix, cAMP Regulatory protein CUC43_27445 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CUC43_27460 SM00460 Transglutaminase/protease-like homologues CUC43_27475 SM00849 Metallo-beta-lactamase superfamily CUC43_27505 SM00829 Enoylreductase CUC43_27520 SM00487 DEAD-like helicases superfamily CUC43_27520 SM00490 helicase superfamily c-terminal domain CUC43_27640 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_27670 SM01005 Alanine racemase, C-terminal domain CUC43_27685 SM00855 Phosphoglycerate mutase family CUC43_27705 SM00859 Semialdehyde dehydrogenase, NAD binding domain CUC43_27740 SM00346 helix_turn_helix isocitrate lyase regulation CUC43_27750 SM00244 prohibitin homologues CUC43_27825 SM01091 Transporter associated domain CUC43_27850 SM00155 Phospholipase D. Active site motifs. CUC43_27915 SM00855 Phosphoglycerate mutase family CUC43_27970 SM00833 Cobalamin synthesis protein cobW C-terminal domain CUC43_28035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUC43_28035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_28070 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_28085 SM00966 SpoVT / AbrB like domain CUC43_28110 SM00460 Transglutaminase/protease-like homologues CUC43_28135 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_28205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUC43_28205 SM00387 Histidine kinase-like ATPases CUC43_28205 SM00388 His Kinase A (phosphoacceptor) domain CUC43_28210 SM00448 cheY-homologous receiver domain CUC43_28210 SM00862 Transcriptional regulatory protein, C terminal CUC43_28285 SM00387 Histidine kinase-like ATPases CUC43_28285 SM00388 His Kinase A (phosphoacceptor) domain CUC43_28290 SM00448 cheY-homologous receiver domain CUC43_28290 SM00862 Transcriptional regulatory protein, C terminal CUC43_28295 SM00382 ATPases associated with a variety of cellular activities CUC43_28305 SM00287 Bacterial SH3 domain homologues CUC43_28360 SM00382 ATPases associated with a variety of cellular activities CUC43_28365 SM00382 ATPases associated with a variety of cellular activities CUC43_28385 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_28420 SM00382 ATPases associated with a variety of cellular activities CUC43_28425 SM00382 ATPases associated with a variety of cellular activities CUC43_28470 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_28475 SM00636 CUC43_28475 CUC43_28505 SM00871 Bacterial transcription activator, effector binding domain CUC43_28510 SM00420 helix_turn_helix, Deoxyribose operon repressor CUC43_28525 SM00382 ATPases associated with a variety of cellular activities CUC43_28560 SM00849 Metallo-beta-lactamase superfamily CUC43_28630 SM00849 Metallo-beta-lactamase superfamily CUC43_28635 SM00829 Enoylreductase CUC43_28750 SM00829 Enoylreductase CUC43_28755 SM00855 Phosphoglycerate mutase family CUC43_28765 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CUC43_28765 SM00534 ATPase domain of DNA mismatch repair MUTS family CUC43_28775 SM00642 Alpha-amylase domain CUC43_28790 SM00422 helix_turn_helix, mercury resistance CUC43_28790 SM00871 Bacterial transcription activator, effector binding domain CUC43_28890 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_28895 SM00829 Enoylreductase CUC43_28905 SM00028 Tetratricopeptide repeats CUC43_28955 SM00347 helix_turn_helix multiple antibiotic resistance protein CUC43_28990 SM00646 CUC43_28990 CUC43_28995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_29010 SM00387 Histidine kinase-like ATPases CUC43_29010 SM00388 His Kinase A (phosphoacceptor) domain CUC43_29015 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CUC43_29040 SM00062 Bacterial periplasmic substrate-binding proteins CUC43_29040 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CUC43_29045 SM00382 ATPases associated with a variety of cellular activities CUC43_29090 SM00479 CUC43_29090 CUC43_29095 SM00357 Cold shock protein domain CUC43_29120 SM01022 CUC43_29120 CUC43_29230 SM00852 Probable molybdopterin binding domain CUC43_29250 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_29310 SM00530 Helix-turn-helix XRE-family like proteins CUC43_29320 SM00646 CUC43_29320 CUC43_29430 SM00507 HNH nucleases CUC43_29450 SM00843 CUC43_29450 CUC43_29540 SM00530 Helix-turn-helix XRE-family like proteins CUC43_29545 SM00530 Helix-turn-helix XRE-family like proteins CUC43_29550 SM00530 Helix-turn-helix XRE-family like proteins CUC43_29565 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CUC43_29675 SM00382 ATPases associated with a variety of cellular activities CUC43_29685 SM00420 helix_turn_helix, Deoxyribose operon repressor CUC43_29700 SM00434 DNA Topoisomerase IV CUC43_29705 SM00387 Histidine kinase-like ATPases CUC43_29705 SM00433 TopoisomeraseII CUC43_29715 SM00881 CoA binding domain CUC43_29720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUC43_29725 SM00448 cheY-homologous receiver domain CUC43_29725 SM00862 Transcriptional regulatory protein, C terminal CUC43_29740 SM01207 CUC43_29740 CUC43_29755 SM00257 Lysin motif CUC43_29755 SM00636 CUC43_29755 CUC43_29770 SM00479 CUC43_29770 CUC43_29785 SM00382 ATPases associated with a variety of cellular activities CUC43_29835 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CUC43_29875 SM00382 ATPases associated with a variety of cellular activities CUC43_29880 SM00530 Helix-turn-helix XRE-family like proteins CUC43_29925 SM00644 CUC43_29925 CUC43_29925 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. CUC43_29930 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CUC43_29950 SM00091 PAS domain CUC43_29950 SM00387 Histidine kinase-like ATPases CUC43_29950 SM00388 His Kinase A (phosphoacceptor) domain CUC43_30085 SM00382 ATPases associated with a variety of cellular activities CUC43_30130 SM00644 CUC43_30130 CUC43_30145 SM00287 Bacterial SH3 domain homologues CUC43_30145 SM00641 Glycosyl hydrolases family 25 CUC43_30150 SM00382 ATPases associated with a variety of cellular activities CUC43_30155 SM00382 ATPases associated with a variety of cellular activities CUC43_30170 SM00861 Transketolase, pyrimidine binding domain CUC43_30185 SM00382 ATPases associated with a variety of cellular activities CUC43_30190 SM00062 Bacterial periplasmic substrate-binding proteins CUC43_30205 SM00857 Resolvase, N terminal domain CUC43_30230 SM00382 ATPases associated with a variety of cellular activities CUC43_30275 SM00710 Parallel beta-helix repeats CUC43_30360 SM01230 CUC43_30360 CUC43_30365 SM00422 helix_turn_helix, mercury resistance CUC43_30385 SM00382 ATPases associated with a variety of cellular activities CUC43_30415 SM00287 Bacterial SH3 domain homologues CUC43_30435 SM00420 helix_turn_helix, Deoxyribose operon repressor CUC43_30435 SM01134 CUC43_30435 CUC43_30470 SM00636 CUC43_30470 CUC43_30485 SM00411 bacterial (prokaryotic) histone like domain CUC43_30520 SM00382 ATPases associated with a variety of cellular activities CUC43_30545 SM00342 helix_turn_helix, arabinose operon control protein CUC43_30555 SM00478 endonuclease III CUC43_30625 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_30645 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_30645 SM00866 CUC43_30645 CUC43_30655 SM00148 Phospholipase C, catalytic domain (part); domain X CUC43_30665 SM00257 Lysin motif CUC43_30705 SM00387 Histidine kinase-like ATPases CUC43_30705 SM00388 His Kinase A (phosphoacceptor) domain CUC43_30710 SM00448 cheY-homologous receiver domain CUC43_30710 SM00862 Transcriptional regulatory protein, C terminal CUC43_30725 SM00382 ATPases associated with a variety of cellular activities CUC43_30730 SM00853 MutL C terminal dimerisation domain CUC43_30730 SM01340 CUC43_30730 CUC43_30735 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CUC43_30735 SM00534 ATPase domain of DNA mismatch repair MUTS family CUC43_30750 SM00729 Elongator protein 3, MiaB family, Radical SAM CUC43_30780 SM00322 K homology RNA-binding domain CUC43_30780 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUC43_30800 SM00852 Probable molybdopterin binding domain CUC43_30855 SM00382 ATPases associated with a variety of cellular activities CUC43_30865 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUC43_30865 SM00866 CUC43_30865 CUC43_30875 SM00382 ATPases associated with a variety of cellular activities CUC43_30875 SM00843 CUC43_30875 CUC43_30890 SM00849 Metallo-beta-lactamase superfamily CUC43_30900 SM01130 CUC43_30900 CUC43_30910 SM00859 Semialdehyde dehydrogenase, NAD binding domain CUC43_30940 SM00316 Ribosomal protein S1-like RNA-binding domain CUC43_30940 SM00322 K homology RNA-binding domain CUC43_30945 SM01387 CUC43_30945 CUC43_30950 SM00904 Riboflavin kinase CUC43_30985 SM00316 Ribosomal protein S1-like RNA-binding domain CUC43_30985 SM00322 K homology RNA-binding domain CUC43_30995 SM00479 CUC43_30995 CUC43_30995 SM00481 DNA polymerase alpha chain like domain CUC43_31010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUC43_31055 SM00382 ATPases associated with a variety of cellular activities CUC43_31055 SM01086 C-terminal, D2-small domain, of ClpB protein CUC43_31075 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CUC43_31075 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CUC43_31075 SM00493 CUC43_31075 CUC43_31095 SM00881 CoA binding domain CUC43_31145 SM00382 ATPases associated with a variety of cellular activities CUC43_31145 SM00962 SRP54-type protein, GTPase domain CUC43_31145 SM00963 SRP54-type protein, helical bundle domain CUC43_31155 SM00382 ATPases associated with a variety of cellular activities CUC43_31155 SM00962 SRP54-type protein, GTPase domain CUC43_31155 SM00963 SRP54-type protein, helical bundle domain CUC43_31160 SM00968 SMC proteins Flexible Hinge Domain CUC43_31165 SM00358 Double-stranded RNA binding motif CUC43_31165 SM00535 Ribonuclease III family CUC43_31175 SM00822 CUC43_31175 CUC43_31180 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CUC43_31195 SM00487 DEAD-like helicases superfamily CUC43_31195 SM00490 helicase superfamily c-terminal domain CUC43_31200 SM01120 CUC43_31200 CUC43_31200 SM01121 CUC43_31200 CUC43_31220 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CUC43_31235 SM00220 Serine/Threonine protein kinases, catalytic domain CUC43_31235 SM00740 CUC43_31235 CUC43_31240 SM00331 Sigma factor PP2C-like phosphatases CUC43_31240 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CUC43_31320 SM00758 CUC43_31320 CUC43_31340 SM00458 Ricin-type beta-trefoil CUC43_31355 SM00448 cheY-homologous receiver domain CUC43_31355 SM00862 Transcriptional regulatory protein, C terminal CUC43_31380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUC43_31380 SM00091 PAS domain CUC43_31380 SM00387 Histidine kinase-like ATPases CUC43_31380 SM00388 His Kinase A (phosphoacceptor) domain CUC43_31420 SM00758 CUC43_31420 CUC43_31465 SM00458 Ricin-type beta-trefoil CUC43_31465 SM00758 CUC43_31465 CUC43_31550 SM00267 diguanylate cyclase CUC43_31670 SM00458 Ricin-type beta-trefoil CUC43_31700 SM00758 CUC43_31700 CUC43_31735 SM00422 helix_turn_helix, mercury resistance CUC43_31805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_31900 SM00382 ATPases associated with a variety of cellular activities CUC43_31930 SM00382 ATPases associated with a variety of cellular activities CUC43_31945 SM00857 Resolvase, N terminal domain CUC43_31975 SM00966 SpoVT / AbrB like domain CUC43_31980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_32050 SM00758 CUC43_32050 CUC43_32115 SM00710 Parallel beta-helix repeats CUC43_32135 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CUC43_32325 SM00382 ATPases associated with a variety of cellular activities CUC43_32330 SM00387 Histidine kinase-like ATPases CUC43_32335 SM00448 cheY-homologous receiver domain CUC43_32335 SM00862 Transcriptional regulatory protein, C terminal CUC43_32490 SM00857 Resolvase, N terminal domain CUC43_32500 SM00382 ATPases associated with a variety of cellular activities CUC43_32580 SM00857 Resolvase, N terminal domain CUC43_32595 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_32600 SM00411 bacterial (prokaryotic) histone like domain CUC43_32610 SM00966 SpoVT / AbrB like domain CUC43_32645 SM00857 Resolvase, N terminal domain CUC43_32755 SM00028 Tetratricopeptide repeats CUC43_32790 SM00530 Helix-turn-helix XRE-family like proteins CUC43_32795 SM00530 Helix-turn-helix XRE-family like proteins CUC43_32980 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CUC43_32980 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CUC43_32980 SM00493 CUC43_32980 CUC43_33050 SM00966 SpoVT / AbrB like domain CUC43_33055 SM00411 bacterial (prokaryotic) histone like domain CUC43_33120 SM00028 Tetratricopeptide repeats CUC43_33320 SM00857 Resolvase, N terminal domain CUC43_33370 SM00857 Resolvase, N terminal domain CUC43_33430 SM00530 Helix-turn-helix XRE-family like proteins CUC43_33505 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CUC43_33505 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CUC43_33505 SM00493 CUC43_33505 CUC43_33610 SM00530 Helix-turn-helix XRE-family like proteins CUC43_33615 SM00530 Helix-turn-helix XRE-family like proteins CUC43_33740 SM00966 SpoVT / AbrB like domain CUC43_33750 SM00411 bacterial (prokaryotic) histone like domain CUC43_33755 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUC43_33795 SM00758 CUC43_33795 CUC43_33825 SM00646 CUC43_33825 CUC43_33830 SM00646 CUC43_33830 CUC43_33910 SM00382 ATPases associated with a variety of cellular activities CUC43_33965 SM00530 Helix-turn-helix XRE-family like proteins CUC43_33970 SM00530 Helix-turn-helix XRE-family like proteins CUC43_34000 SM00287 Bacterial SH3 domain homologues