MC28_4649 75cd8f54d5e27478167ab1d0381521c3 696 Pfam PF02554 Carbon starvation protein CstA 37 414 3.1E-172 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 MC28_4649 75cd8f54d5e27478167ab1d0381521c3 696 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 468 596 7.7E-36 T 14-10-2018 IPR025299 CstA, C-terminal domain MC28_E044 71b05152a05cddba29717cbf7d32a6c6 122 SMART SM00530 4 59 1.7E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_E044 71b05152a05cddba29717cbf7d32a6c6 122 SUPERFAMILY SSF47413 3 66 2.28E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_E044 71b05152a05cddba29717cbf7d32a6c6 122 Gene3D G3DSA:1.10.260.40 1 82 5.4E-18 T 14-10-2018 MC28_E044 71b05152a05cddba29717cbf7d32a6c6 122 Pfam PF01381 Helix-turn-helix 5 59 1.7E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1661 987f0437dc551fae21a794d88d58d2ad 436 SUPERFAMILY SSF51905 1 423 2.85E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1661 987f0437dc551fae21a794d88d58d2ad 436 Gene3D G3DSA:3.90.660.50 83 370 2.6E-33 T 14-10-2018 MC28_1661 987f0437dc551fae21a794d88d58d2ad 436 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 376 398 1.7E-5 T 14-10-2018 MC28_1661 987f0437dc551fae21a794d88d58d2ad 436 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.7E-5 T 14-10-2018 MC28_1661 987f0437dc551fae21a794d88d58d2ad 436 Gene3D G3DSA:3.50.50.60 8 398 2.6E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1661 987f0437dc551fae21a794d88d58d2ad 436 Pfam PF01593 Flavin containing amine oxidoreductase 13 252 2.1E-21 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 MC28_3718 d7ea97b67cac6b0244c8205c57b6fdde 784 Gene3D G3DSA:3.10.350.10 1 54 6.0E-16 T 14-10-2018 IPR036779 LysM domain superfamily MC28_3718 d7ea97b67cac6b0244c8205c57b6fdde 784 SMART SM00257 1 43 1.9E-12 T 14-10-2018 IPR018392 LysM domain MC28_3718 d7ea97b67cac6b0244c8205c57b6fdde 784 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 1 44 5.5E-28 T 14-10-2018 IPR014248 Spore coat assembly protein SafA MC28_3718 d7ea97b67cac6b0244c8205c57b6fdde 784 SUPERFAMILY SSF54106 1 43 1.7E-9 T 14-10-2018 MC28_3718 d7ea97b67cac6b0244c8205c57b6fdde 784 Pfam PF01476 LysM domain 1 43 2.2E-14 T 14-10-2018 IPR018392 LysM domain MC28_3628 70c058c71b247e05cc817581d44339b2 170 SUPERFAMILY SSF56784 14 147 3.74E-25 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3628 70c058c71b247e05cc817581d44339b2 170 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 27 137 3.8E-24 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 MC28_3628 70c058c71b247e05cc817581d44339b2 170 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 59 129 1.3E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_3628 70c058c71b247e05cc817581d44339b2 170 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 35 135 1.2E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_3628 70c058c71b247e05cc817581d44339b2 170 Pfam PF13242 HAD-hyrolase-like 90 135 6.8E-12 T 14-10-2018 MC28_3628 70c058c71b247e05cc817581d44339b2 170 Pfam PF08282 haloacid dehalogenase-like hydrolase 29 84 7.4E-5 T 14-10-2018 MC28_3628 70c058c71b247e05cc817581d44339b2 170 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 2 163 7.0E-58 T 14-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like MC28_3628 70c058c71b247e05cc817581d44339b2 170 Gene3D G3DSA:3.40.50.1000 15 161 2.6E-24 T 14-10-2018 IPR023214 HAD superfamily MC28_4748 204b8ccc2aac9d0d95ff40d617f5811b 118 PIRSF PIRSF021439 3 118 1.4E-42 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 MC28_4748 204b8ccc2aac9d0d95ff40d617f5811b 118 Pfam PF06156 Initiation control protein YabA 4 113 1.3E-37 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 MC28_4748 204b8ccc2aac9d0d95ff40d617f5811b 118 Hamap MF_01159 Initiation-control protein YabA. 3 117 25.453 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 MC28_5237 97c1229e1119ad0631c8ef787b7545a2 388 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 18 179 6.3E-41 T 14-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 MC28_5237 97c1229e1119ad0631c8ef787b7545a2 388 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 224 348 2.7E-13 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 MC28_5237 97c1229e1119ad0631c8ef787b7545a2 388 Gene3D G3DSA:3.40.50.2000 189 352 2.8E-29 T 14-10-2018 MC28_5237 97c1229e1119ad0631c8ef787b7545a2 388 Hamap MF_01280 Processive diacylglycerol beta-glucosyltransferase [ugtP]. 1 388 57.841 T 14-10-2018 IPR023589 Processive diacylglycerol beta-glucosyltransferase GO:0047228 KEGG: 00561+2.4.1.315|MetaCyc: PWY-7817 MC28_5237 97c1229e1119ad0631c8ef787b7545a2 388 SUPERFAMILY SSF53756 6 367 8.38E-35 T 14-10-2018 MC28_3559 0ed1e8f09301c9a9c9065afe22da45ec 784 Gene3D G3DSA:2.160.10.10 240 373 2.5E-21 T 14-10-2018 MC28_3559 0ed1e8f09301c9a9c9065afe22da45ec 784 SUPERFAMILY SSF53738 388 516 7.06E-6 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_3559 0ed1e8f09301c9a9c9065afe22da45ec 784 Pfam PF00483 Nucleotidyl transferase 2 230 2.1E-50 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 MC28_3559 0ed1e8f09301c9a9c9065afe22da45ec 784 Gene3D G3DSA:3.40.120.10 383 524 1.2E-14 T 14-10-2018 MC28_3559 0ed1e8f09301c9a9c9065afe22da45ec 784 SUPERFAMILY SSF53448 1 234 4.12E-76 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_3559 0ed1e8f09301c9a9c9065afe22da45ec 784 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 393 509 1.2E-8 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_3559 0ed1e8f09301c9a9c9065afe22da45ec 784 SUPERFAMILY SSF51161 241 430 1.7E-27 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_3559 0ed1e8f09301c9a9c9065afe22da45ec 784 Gene3D G3DSA:3.90.550.10 1 239 2.2E-72 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_3559 0ed1e8f09301c9a9c9065afe22da45ec 784 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 297 4.7E-6 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_5066 3500772b3cb39e34237d6e2edfe92aa3 305 SUPERFAMILY SSF53807 38 298 1.77E-52 T 14-10-2018 MC28_5066 3500772b3cb39e34237d6e2edfe92aa3 305 Pfam PF01497 Periplasmic binding protein 70 278 1.8E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_5066 3500772b3cb39e34237d6e2edfe92aa3 305 Gene3D G3DSA:3.40.50.1980 148 305 2.6E-58 T 14-10-2018 MC28_5066 3500772b3cb39e34237d6e2edfe92aa3 305 Gene3D G3DSA:3.40.50.1980 24 147 1.9E-25 T 14-10-2018 MC28_0120 140e67085169fa73427ab4f6ea44404d 588 Pfam PF12793 Sugar transport-related sRNA regulator N-term 10 123 4.1E-30 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain MC28_0120 140e67085169fa73427ab4f6ea44404d 588 Gene3D G3DSA:3.40.190.10 126 352 4.9E-46 T 14-10-2018 MC28_0120 140e67085169fa73427ab4f6ea44404d 588 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 175 482 1.0E-42 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_0120 140e67085169fa73427ab4f6ea44404d 588 Gene3D G3DSA:3.10.105.10 353 554 2.5E-18 T 14-10-2018 MC28_0120 140e67085169fa73427ab4f6ea44404d 588 SUPERFAMILY SSF53850 132 584 1.39E-79 T 14-10-2018 MC28_0120 140e67085169fa73427ab4f6ea44404d 588 PIRSF PIRSF002741 111 586 7.0E-52 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 3.9E-90 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 3.9E-90 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 3.9E-90 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 3.9E-90 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 3.9E-90 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 3.9E-90 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 3.9E-90 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 3.9E-90 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 3.9E-90 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 PIRSF PIRSF000532 1 319 1.6E-124 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 1.2E-141 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 Pfam PF00365 Phosphofructokinase 3 275 3.9E-115 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 50.039 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 SUPERFAMILY SSF53784 1 316 9.42E-121 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 Gene3D G3DSA:3.40.50.460 142 251 4.6E-121 T 14-10-2018 MC28_3877 6faaf23ce0e8a184a1074d6bc4d96393 319 Gene3D G3DSA:3.40.50.450 3 278 4.6E-121 T 14-10-2018 MC28_4881 ef6644d631799bd646e1c725f0900852 473 Pfam PF01565 FAD binding domain 42 175 8.8E-27 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 MC28_4881 ef6644d631799bd646e1c725f0900852 473 SUPERFAMILY SSF56176 22 203 1.26E-38 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_4881 ef6644d631799bd646e1c725f0900852 473 SUPERFAMILY SSF55103 181 461 2.71E-21 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 MC28_4881 ef6644d631799bd646e1c725f0900852 473 Pfam PF04030 D-arabinono-1,4-lactone oxidase 199 469 3.8E-7 T 14-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 MC28_4881 ef6644d631799bd646e1c725f0900852 473 Gene3D G3DSA:3.30.465.10 92 206 3.2E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 MC28_4881 ef6644d631799bd646e1c725f0900852 473 Gene3D G3DSA:1.10.45.10 436 472 2.6E-5 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 MC28_4510 d508917334057991ebb2db88d09ee8cc 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 263 1.8E-121 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 MC28_4510 d508917334057991ebb2db88d09ee8cc 293 SUPERFAMILY SSF53448 3 267 2.5E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4510 d508917334057991ebb2db88d09ee8cc 293 Pfam PF00483 Nucleotidyl transferase 6 258 2.2E-35 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 MC28_4510 d508917334057991ebb2db88d09ee8cc 293 Gene3D G3DSA:3.90.550.10 1 290 8.6E-97 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 1292 1352 1.33E-8 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49401 574 710 8.95E-29 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 1763 1828 6.67E-7 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49401 43 186 6.71E-22 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2330 2396 2.47E-7 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2048 2113 1.73E-6 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2991 3054 5.1E-6 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 1577 1636 9.02E-7 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49401 854 973 4.47E-15 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2693 2785 2.1E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2879 2974 3.7E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2035 2131 2.0E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 1939 2031 4.1E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 1565 1657 9.3E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2786 2878 3.9E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 1279 1376 1.3E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 1753 1844 1.0E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2412 2505 1.2E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2319 2411 5.0E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2975 3075 6.7E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2506 2597 3.2E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2132 2224 4.1E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2598 2692 3.0E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 2225 2318 1.1E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 1658 1752 2.7E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 1377 1471 8.8E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 1472 1564 7.7E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.10 1845 1936 1.3E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2424 2486 1.06E-5 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49401 430 569 5.47E-31 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Pfam PF05737 Collagen binding domain 713 837 1.1E-10 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Pfam PF05737 Collagen binding domain 988 1111 1.3E-16 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Pfam PF05737 Collagen binding domain 574 701 4.0E-24 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Pfam PF05737 Collagen binding domain 1137 1258 1.1E-12 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49401 710 848 2.48E-24 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2144 2208 1.02E-7 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2706 2769 5.49E-6 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 1382 1451 1.22E-7 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 1857 1919 3.06E-6 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.740 575 712 4.7E-10 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2803 2863 2.12E-6 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 1674 1736 1.96E-6 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.1280 424 573 2.8E-24 T 14-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 Gene3D G3DSA:2.60.40.1280 49 191 4.5E-16 T 14-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 1958 2018 3.65E-6 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2892 2957 6.67E-8 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 1483 1548 3.1E-6 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49401 1128 1266 6.71E-25 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2517 2578 5.89E-7 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 3124 3156 4.7E-4 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49401 988 1123 5.96E-25 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2243 2302 1.06E-5 T 14-10-2018 MC28_4593 7a2e534fa3bfcff499180d36315b378e 3158 SUPERFAMILY SSF49478 2610 2676 2.55E-7 T 14-10-2018 MC28_0815 625721650a2740d18666416203edfd80 505 Gene3D G3DSA:1.10.1370.30 3 505 1.9E-211 T 14-10-2018 MC28_0815 625721650a2740d18666416203edfd80 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 406 427 2.1E-81 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 249 268 2.1E-81 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 152 172 2.1E-81 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 451 469 2.1E-81 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 269 288 2.1E-81 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 296 312 2.1E-81 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 383 400 2.1E-81 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 337 356 2.1E-81 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 232 248 2.1E-81 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 PIRSF PIRSF006615 4 505 2.7E-200 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0815 625721650a2740d18666416203edfd80 505 SUPERFAMILY SSF55486 7 499 2.09E-124 T 14-10-2018 MC28_0815 625721650a2740d18666416203edfd80 505 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 2 499 1.6E-215 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 MC28_0130 298e610842e1323e15f05b5107986b31 666 SMART SM00382 453 641 1.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0130 298e610842e1323e15f05b5107986b31 666 SUPERFAMILY SSF52540 421 660 9.48E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0130 298e610842e1323e15f05b5107986b31 666 Pfam PF00005 ABC transporter 444 589 1.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0130 298e610842e1323e15f05b5107986b31 666 Pfam PF00664 ABC transporter transmembrane region 148 384 2.6E-39 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 MC28_0130 298e610842e1323e15f05b5107986b31 666 Gene3D G3DSA:3.40.50.300 424 666 8.0E-83 T 14-10-2018 MC28_0130 298e610842e1323e15f05b5107986b31 666 Gene3D G3DSA:1.20.1560.10 125 412 2.7E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_0130 298e610842e1323e15f05b5107986b31 666 SUPERFAMILY SSF90123 5 414 1.96E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 Gene3D G3DSA:2.60.40.1180 507 586 6.4E-22 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 121 1.8E-47 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 Gene3D G3DSA:2.60.40.10 1 125 2.8E-46 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 Pfam PF00128 Alpha amylase, catalytic domain 173 469 6.4E-80 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 SUPERFAMILY SSF51445 68 503 3.58E-123 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 Pfam PF16657 Maltogenic Amylase, C-terminal domain 507 583 2.6E-14 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 Gene3D G3DSA:3.90.400.10 246 299 5.6E-156 T 14-10-2018 MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 Gene3D G3DSA:3.20.20.80 133 499 5.6E-156 T 14-10-2018 MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 SMART SM00642 139 497 2.6E-120 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_3304 5eb0e90fe918ac15379b6a45e2aa0291 586 SUPERFAMILY SSF51011 507 585 2.44E-17 T 14-10-2018 MC28_3053 d52626647a5289ae3046bd1c640f6611 180 SUPERFAMILY SSF56235 4 179 9.77E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_3053 d52626647a5289ae3046bd1c640f6611 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 180 5.4E-85 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 MC28_3053 d52626647a5289ae3046bd1c640f6611 180 Pfam PF00227 Proteasome subunit 5 178 3.8E-25 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 MC28_3053 d52626647a5289ae3046bd1c640f6611 180 Gene3D G3DSA:3.60.20.10 2 180 8.7E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_3053 d52626647a5289ae3046bd1c640f6611 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 180 41.219 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 MC28_3053 d52626647a5289ae3046bd1c640f6611 180 PIRSF PIRSF039093 1 180 2.7E-85 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 MC28_E138 ee6eed31d34fef129eaacda913cec964 708 SMART SM00148 63 209 2.4E-7 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_E138 ee6eed31d34fef129eaacda913cec964 708 Gene3D G3DSA:3.20.20.190 47 315 2.1E-70 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_E138 ee6eed31d34fef129eaacda913cec964 708 Gene3D G3DSA:2.80.10.50 464 606 2.8E-26 T 14-10-2018 MC28_E138 ee6eed31d34fef129eaacda913cec964 708 SUPERFAMILY SSF51695 52 359 1.31E-51 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_E138 ee6eed31d34fef129eaacda913cec964 708 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 91 207 3.5E-10 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_E138 ee6eed31d34fef129eaacda913cec964 708 SUPERFAMILY SSF50370 466 600 3.41E-16 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_A09 7b79049faf1677f83f4840c07890bc1d 166 Gene3D G3DSA:1.10.260.40 57 162 3.4E-16 T 14-10-2018 MC28_A09 7b79049faf1677f83f4840c07890bc1d 166 SUPERFAMILY SSF47413 57 123 2.82E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_A09 7b79049faf1677f83f4840c07890bc1d 166 Pfam PF01381 Helix-turn-helix 61 115 8.8E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_A09 7b79049faf1677f83f4840c07890bc1d 166 SMART SM00530 60 115 5.4E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 Gene3D G3DSA:3.30.70.260 255 398 5.3E-45 T 14-10-2018 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 SUPERFAMILY SSF55021 326 400 3.72E-20 T 14-10-2018 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 59 399 1.1E-117 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 SUPERFAMILY SSF55021 250 322 1.52E-13 T 14-10-2018 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 Pfam PF01842 ACT domain 272 321 9.5E-7 T 14-10-2018 IPR002912 ACT domain MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 Gene3D G3DSA:3.40.1160.10 1 254 6.0E-89 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 399 8.8E-144 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 Gene3D G3DSA:3.30.70.260 260 335 5.3E-45 T 14-10-2018 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 PIRSF PIRSF000726 1 61 4.0E-19 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 PIRSF PIRSF000726 53 405 8.5E-130 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 SUPERFAMILY SSF53633 3 243 2.62E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 Pfam PF13840 ACT domain 333 396 1.4E-11 T 14-10-2018 IPR027795 CASTOR, ACT domain MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_1001 896bf9843b36fd59f6156704fb04a1e3 409 Pfam PF00696 Amino acid kinase family 3 223 1.4E-51 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 302 331 3.2E-6 T 14-10-2018 MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 340 369 1.5E-5 T 14-10-2018 MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 21 46 8.9E-5 T 14-10-2018 MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 SUPERFAMILY SSF50985 21 183 2.62E-19 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 305 315 - T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 SUPERFAMILY SSF50985 156 381 1.11E-39 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 Gene3D G3DSA:2.130.10.30 299 379 1.1E-19 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 Gene3D G3DSA:2.130.10.30 154 298 1.4E-27 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 Gene3D G3DSA:2.130.10.30 19 153 6.7E-21 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 267 277 - T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 MC28_1027 34135ec445bbe33cfa3621e43cbdeb95 383 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 21 31 - T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 269 368 7.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 Gene3D G3DSA:3.30.565.10 226 372 5.4E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 Gene3D G3DSA:1.10.287.130 165 220 1.2E-10 T 14-10-2018 MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 SUPERFAMILY SSF55874 221 369 1.7E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 Pfam PF09385 Histidine kinase N terminal 11 139 8.4E-50 T 14-10-2018 IPR018984 Histidine kinase, N-terminal MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 SMART SM00387 266 372 4.5E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 Gene3D G3DSA:1.10.490.70 6 159 1.4E-53 T 14-10-2018 IPR038284 Histidine kinase, N-terminal domain superfamily MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 353 6.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 334 6.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 320 6.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 Pfam PF00512 His Kinase A (phospho-acceptor) domain 163 222 2.7E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 SMART SM00388 162 224 3.3E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1462 13eea80cef0a8f7b31b8bad0363e9846 372 SUPERFAMILY SSF47384 151 222 1.65E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Pfam PF05227 CHASE3 domain 33 159 1.3E-19 T 14-10-2018 IPR007891 CHASE3 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Gene3D G3DSA:1.20.1440.210 37 156 2.0E-11 T 14-10-2018 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 550 9.3E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 SUPERFAMILY SSF47384 468 551 2.35E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 SUPERFAMILY SSF55874 539 721 1.27E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 PRINTS PR00344 Bacterial sensor protein C-terminal signature 705 718 1.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 660 1.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 699 1.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 674 1.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Gene3D G3DSA:3.30.450.40 233 399 4.6E-13 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 SMART SM00448 763 877 2.7E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 597 718 4.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Pfam PF13185 GAF domain 262 397 4.9E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Gene3D G3DSA:3.40.50.12740 762 881 1.5E-39 T 14-10-2018 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Pfam PF00072 Response regulator receiver domain 765 875 5.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 SMART SM00387 597 721 4.0E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Gene3D G3DSA:1.10.287.130 447 548 1.5E-24 T 14-10-2018 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 SUPERFAMILY SSF55781 242 426 2.39E-22 T 14-10-2018 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 Gene3D G3DSA:3.30.565.10 549 720 9.8E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 SMART SM00388 482 550 4.7E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0241 9bd6482f7e64ea8e1547c013f4750f21 883 SUPERFAMILY SSF52172 760 880 1.15E-36 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4514 b672ca54b6f20fc9ab0c1ae442a11d72 259 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 59 259 1.1E-69 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 MC28_4514 b672ca54b6f20fc9ab0c1ae442a11d72 259 Pfam PF13614 AAA domain 80 221 1.2E-13 T 14-10-2018 IPR025669 AAA domain MC28_4514 b672ca54b6f20fc9ab0c1ae442a11d72 259 Gene3D G3DSA:3.40.50.300 9 259 3.8E-75 T 14-10-2018 MC28_4514 b672ca54b6f20fc9ab0c1ae442a11d72 259 SUPERFAMILY SSF52540 78 252 4.38E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4104 9b0f18524368d7c5442fc8a80623528f 300 SMART SM00046 8 134 2.7E-13 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 MC28_4104 9b0f18524368d7c5442fc8a80623528f 300 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 130 1.8E-34 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 MC28_4104 9b0f18524368d7c5442fc8a80623528f 300 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 7 293 2.8E-80 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase MC28_4104 9b0f18524368d7c5442fc8a80623528f 300 Gene3D G3DSA:2.60.200.40 129 281 4.8E-101 T 14-10-2018 MC28_4104 9b0f18524368d7c5442fc8a80623528f 300 Gene3D G3DSA:3.40.50.10330 10 128 4.8E-101 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 MC28_4104 9b0f18524368d7c5442fc8a80623528f 300 SUPERFAMILY SSF111331 6 297 6.8E-75 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily MC28_1428 90ee1d963da14568aa8a74ae3e21d5f3 333 Gene3D G3DSA:2.30.30.40 273 329 7.4E-7 T 14-10-2018 MC28_1428 90ee1d963da14568aa8a74ae3e21d5f3 333 Gene3D G3DSA:2.30.30.40 193 260 1.8E-8 T 14-10-2018 MC28_1428 90ee1d963da14568aa8a74ae3e21d5f3 333 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 175 1.5E-44 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 MC28_1428 90ee1d963da14568aa8a74ae3e21d5f3 333 Gene3D G3DSA:3.40.630.40 1 181 8.2E-52 T 14-10-2018 MC28_1428 90ee1d963da14568aa8a74ae3e21d5f3 333 SUPERFAMILY SSF53187 1 180 3.77E-50 T 14-10-2018 MC28_1428 90ee1d963da14568aa8a74ae3e21d5f3 333 SMART SM00287 271 330 1.4 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1428 90ee1d963da14568aa8a74ae3e21d5f3 333 SMART SM00287 201 264 0.042 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1428 90ee1d963da14568aa8a74ae3e21d5f3 333 SMART SM00646 62 175 1.1E-30 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 MC28_3921 d0b28f52c4c3f23ae41e016492c08797 523 Gene3D G3DSA:3.10.310.70 78 197 1.6E-129 T 14-10-2018 MC28_3921 d0b28f52c4c3f23ae41e016492c08797 523 SUPERFAMILY SSF51556 59 478 3.12E-32 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_3921 d0b28f52c4c3f23ae41e016492c08797 523 SUPERFAMILY SSF51338 4 520 2.7E-16 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_3921 d0b28f52c4c3f23ae41e016492c08797 523 Pfam PF07969 Amidohydrolase family 50 519 1.7E-129 T 14-10-2018 IPR013108 Amidohydrolase 3 MC28_3921 d0b28f52c4c3f23ae41e016492c08797 523 Gene3D G3DSA:2.30.40.10 7 495 1.6E-129 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_3921 d0b28f52c4c3f23ae41e016492c08797 523 Gene3D G3DSA:3.20.20.140 60 478 1.6E-129 T 14-10-2018 MC28_2845 4285458e7a8ccbe475ec3384a09f5703 622 Gene3D G3DSA:3.60.20.10 2 204 3.2E-31 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_2845 4285458e7a8ccbe475ec3384a09f5703 622 Gene3D G3DSA:3.40.50.620 208 366 1.8E-23 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_2845 4285458e7a8ccbe475ec3384a09f5703 622 Pfam PF13537 Glutamine amidotransferase domain 35 140 5.2E-19 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain MC28_2845 4285458e7a8ccbe475ec3384a09f5703 622 SUPERFAMILY SSF56235 13 202 7.43E-28 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_2845 4285458e7a8ccbe475ec3384a09f5703 622 Gene3D G3DSA:3.40.50.620 448 589 2.8E-7 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_2845 4285458e7a8ccbe475ec3384a09f5703 622 PIRSF PIRSF001589 1 547 4.2E-45 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 MC28_2845 4285458e7a8ccbe475ec3384a09f5703 622 Pfam PF00733 Asparagine synthase 222 542 4.7E-22 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 MC28_2845 4285458e7a8ccbe475ec3384a09f5703 622 SUPERFAMILY SSF52402 213 586 2.93E-26 T 14-10-2018 MC28_1559 ff9b4170106f9cd23a241c8cba17213c 302 SUPERFAMILY SSF51621 9 294 1.97E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 MC28_1559 ff9b4170106f9cd23a241c8cba17213c 302 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 256 2.8E-53 T 14-10-2018 MC28_1559 ff9b4170106f9cd23a241c8cba17213c 302 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 MC28_1559 ff9b4170106f9cd23a241c8cba17213c 302 Gene3D G3DSA:3.20.20.60 1 302 1.2E-113 T 14-10-2018 MC28_1559 ff9b4170106f9cd23a241c8cba17213c 302 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 17 295 4.1E-130 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 MC28_1559 ff9b4170106f9cd23a241c8cba17213c 302 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 296 48.442 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 MC28_2741 ac1393b472e05f2e834a659608270ab1 177 Pfam PF04542 Sigma-70 region 2 35 94 4.1E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_2741 ac1393b472e05f2e834a659608270ab1 177 Gene3D G3DSA:1.10.10.10 120 177 9.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2741 ac1393b472e05f2e834a659608270ab1 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 174 4.7E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_2741 ac1393b472e05f2e834a659608270ab1 177 SUPERFAMILY SSF88659 115 175 6.54E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_2741 ac1393b472e05f2e834a659608270ab1 177 SUPERFAMILY SSF88946 14 109 2.12E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_2741 ac1393b472e05f2e834a659608270ab1 177 Pfam PF08281 Sigma-70, region 4 122 170 3.6E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_2741 ac1393b472e05f2e834a659608270ab1 177 Gene3D G3DSA:1.10.1740.10 10 119 4.8E-21 T 14-10-2018 MC28_3885 3ba85fea2c58179ddcad09875697a436 352 Gene3D G3DSA:3.90.1640.10 40 239 1.3E-61 T 14-10-2018 MC28_3885 3ba85fea2c58179ddcad09875697a436 352 Pfam PF02272 DHHA1 domain 221 350 2.3E-13 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 MC28_3885 3ba85fea2c58179ddcad09875697a436 352 Pfam PF01368 DHH family 57 195 1.3E-13 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 MC28_3885 3ba85fea2c58179ddcad09875697a436 352 Gene3D G3DSA:3.10.310.30 241 352 9.0E-35 T 14-10-2018 MC28_3885 3ba85fea2c58179ddcad09875697a436 352 SUPERFAMILY SSF64182 55 341 6.67E-74 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 Pfam PF02743 Cache domain 41 268 1.3E-28 T 14-10-2018 IPR033479 Double Cache domain 1 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 Gene3D G3DSA:1.20.1480.50 276 362 2.7E-16 T 14-10-2018 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 Pfam PF00672 HAMP domain 307 353 3.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 SUPERFAMILY SSF103190 99 198 1.67E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 Gene3D G3DSA:1.10.287.950 363 663 1.8E-65 T 14-10-2018 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 486 513 3.5E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 3.5E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 515 544 3.5E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 SUPERFAMILY SSF58104 327 663 1.11E-70 T 14-10-2018 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 Gene3D G3DSA:3.30.450.20 92 187 8.6E-27 T 14-10-2018 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 SMART SM00283 388 663 2.9E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 SMART SM00304 307 359 8.8E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 Gene3D G3DSA:3.30.450.20 188 275 8.6E-27 T 14-10-2018 MC28_4280 4fbfaa4cd5414a6a40e983d81402979b 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 462 599 1.7E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_0993 c824c3c6f311e074b1d0762ab2500a3b 311 Pfam PF00072 Response regulator receiver domain 6 115 2.5E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0993 c824c3c6f311e074b1d0762ab2500a3b 311 SUPERFAMILY SSF52172 6 136 5.12E-21 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0993 c824c3c6f311e074b1d0762ab2500a3b 311 SMART SM00448 5 115 5.6E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0993 c824c3c6f311e074b1d0762ab2500a3b 311 Gene3D G3DSA:3.40.50.12740 5 156 1.8E-20 T 14-10-2018 MC28_0993 c824c3c6f311e074b1d0762ab2500a3b 311 Pfam PF08664 YcbB domain 162 300 1.4E-48 T 14-10-2018 IPR013972 YcbB domain MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 PRINTS PR01035 Tetracycline resistance protein signature 142 164 2.8E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 PRINTS PR01035 Tetracycline resistance protein signature 285 306 2.8E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 PRINTS PR01035 Tetracycline resistance protein signature 85 109 2.8E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 PRINTS PR01035 Tetracycline resistance protein signature 112 133 2.8E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 PRINTS PR01035 Tetracycline resistance protein signature 346 369 2.8E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 PRINTS PR01035 Tetracycline resistance protein signature 23 39 2.8E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 Gene3D G3DSA:1.20.1250.20 216 405 6.1E-34 T 14-10-2018 MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 Gene3D G3DSA:1.20.1250.20 6 215 3.4E-43 T 14-10-2018 MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 SUPERFAMILY SSF103473 10 398 4.1E-76 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1040 58920a0b7e09dba2fbc729b25d8d35b5 410 Pfam PF07690 Major Facilitator Superfamily 18 301 1.1E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_4213 c14d87bd0fa4dc15fcdff81f07c7384c 264 Pfam PF13427 Domain of unknown function (DUF4111) 153 238 7.7E-8 T 14-10-2018 IPR025184 Domain of unknown function DUF4111 MC28_4213 c14d87bd0fa4dc15fcdff81f07c7384c 264 Pfam PF01909 Nucleotidyltransferase domain 29 78 1.5E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 MC28_4213 c14d87bd0fa4dc15fcdff81f07c7384c 264 SUPERFAMILY SSF81301 32 78 3.6E-8 T 14-10-2018 MC28_4213 c14d87bd0fa4dc15fcdff81f07c7384c 264 Gene3D G3DSA:3.30.460.10 5 112 4.8E-6 T 14-10-2018 MC28_0524 48a4c231de27b3249e6a4d67bee50f5c 273 Gene3D G3DSA:3.40.33.10 15 272 1.3E-66 T 14-10-2018 IPR035940 CAP superfamily MC28_0524 48a4c231de27b3249e6a4d67bee50f5c 273 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 150 271 4.7E-62 T 14-10-2018 IPR014258 CAP domain, YkwD-like MC28_0524 48a4c231de27b3249e6a4d67bee50f5c 273 SUPERFAMILY SSF55797 149 270 9.55E-28 T 14-10-2018 IPR035940 CAP superfamily MC28_0524 48a4c231de27b3249e6a4d67bee50f5c 273 Pfam PF00188 Cysteine-rich secretory protein family 158 270 4.5E-24 T 14-10-2018 IPR014044 CAP domain MC28_0751 3b278192516fb026033bc1cdb83a25bb 361 Gene3D G3DSA:3.40.50.1970 2 171 2.0E-57 T 14-10-2018 MC28_0751 3b278192516fb026033bc1cdb83a25bb 361 Pfam PF01761 3-dehydroquinate synthase 68 323 2.8E-95 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 MC28_0751 3b278192516fb026033bc1cdb83a25bb 361 PIRSF PIRSF001455 3 361 1.2E-100 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 MC28_0751 3b278192516fb026033bc1cdb83a25bb 361 Gene3D G3DSA:1.20.1090.10 173 358 2.6E-52 T 14-10-2018 MC28_0751 3b278192516fb026033bc1cdb83a25bb 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 359 64.224 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 MC28_0751 3b278192516fb026033bc1cdb83a25bb 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 349 7.1E-110 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 MC28_0751 3b278192516fb026033bc1cdb83a25bb 361 SUPERFAMILY SSF56796 7 356 4.19E-98 T 14-10-2018 MC28_3673 2e4123207137edf5f292863db9ccf383 309 Pfam PF01136 Peptidase family U32 75 306 1.5E-70 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 MC28_1914 b35dfece3cb39a331c3c6ce6350e292d 255 SUPERFAMILY SSF54001 4 255 1.37E-61 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_1914 b35dfece3cb39a331c3c6ce6350e292d 255 Gene3D G3DSA:3.30.2140.20 1 255 1.1E-76 T 14-10-2018 MC28_1914 b35dfece3cb39a331c3c6ce6350e292d 255 Pfam PF00797 N-acetyltransferase 23 255 6.7E-43 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1914 b35dfece3cb39a331c3c6ce6350e292d 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 5.2E-7 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1914 b35dfece3cb39a331c3c6ce6350e292d 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 5.2E-7 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1914 b35dfece3cb39a331c3c6ce6350e292d 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 102 127 5.2E-7 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1914 b35dfece3cb39a331c3c6ce6350e292d 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 5.2E-7 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 Gene3D G3DSA:3.30.540.10 1 144 2.1E-44 T 14-10-2018 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 Gene3D G3DSA:3.40.190.80 146 263 2.0E-31 T 14-10-2018 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 1.6E-36 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 1.6E-36 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 1.6E-36 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 1.6E-36 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 1.6E-36 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 1.6E-36 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 Pfam PF00459 Inositol monophosphatase family 8 255 9.8E-64 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 MC28_3244 5aa895824005f31f9de2a22fc994bd14 263 SUPERFAMILY SSF56655 5 262 8.64E-75 T 14-10-2018 MC28_4758 fab7ce71a4e3cf7016efde3250d55d27 86 PIRSF PIRSF037257 1 85 1.0E-35 T 14-10-2018 IPR009366 Protein Veg GO:0006355 MC28_4758 fab7ce71a4e3cf7016efde3250d55d27 86 Gene3D G3DSA:2.30.30.100 1 78 1.1E-25 T 14-10-2018 MC28_4758 fab7ce71a4e3cf7016efde3250d55d27 86 Pfam PF06257 Biofilm formation stimulator VEG 4 74 6.7E-30 T 14-10-2018 IPR009366 Protein Veg GO:0006355 MC28_E079 9c229976bd7a4d71bf94b5167afe58e5 498 SUPERFAMILY SSF51695 43 351 2.77E-47 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_E079 9c229976bd7a4d71bf94b5167afe58e5 498 Gene3D G3DSA:2.80.10.50 354 495 9.9E-25 T 14-10-2018 MC28_E079 9c229976bd7a4d71bf94b5167afe58e5 498 Pfam PF05588 Clostridium botulinum HA-17 domain 356 418 2.7E-4 T 14-10-2018 MC28_E079 9c229976bd7a4d71bf94b5167afe58e5 498 SMART SM00458 358 490 7.4E-7 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_E079 9c229976bd7a4d71bf94b5167afe58e5 498 SMART SM00148 53 199 2.2E-8 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_E079 9c229976bd7a4d71bf94b5167afe58e5 498 Gene3D G3DSA:3.20.20.190 42 297 4.6E-64 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_E079 9c229976bd7a4d71bf94b5167afe58e5 498 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 86 197 8.5E-7 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_E079 9c229976bd7a4d71bf94b5167afe58e5 498 SUPERFAMILY SSF50370 357 485 7.42E-22 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_0905 4ffaf1988348786473caacecf09937e4 341 Pfam PF00669 Bacterial flagellin N-terminal helical region 2 114 3.5E-28 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MC28_0905 4ffaf1988348786473caacecf09937e4 341 Pfam PF00700 Bacterial flagellin C-terminal helical region 256 340 8.4E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MC28_0905 4ffaf1988348786473caacecf09937e4 341 SUPERFAMILY SSF64518 1 341 1.7E-84 T 14-10-2018 MC28_0905 4ffaf1988348786473caacecf09937e4 341 Gene3D G3DSA:3.30.70.2120 145 240 4.3E-52 T 14-10-2018 MC28_0905 4ffaf1988348786473caacecf09937e4 341 Gene3D G3DSA:1.10.8.410 291 341 1.3E-19 T 14-10-2018 MC28_0905 4ffaf1988348786473caacecf09937e4 341 PRINTS PR00207 Flagellin signature 9 26 2.7E-19 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 MC28_0905 4ffaf1988348786473caacecf09937e4 341 PRINTS PR00207 Flagellin signature 83 106 2.7E-19 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 MC28_0905 4ffaf1988348786473caacecf09937e4 341 PRINTS PR00207 Flagellin signature 48 67 2.7E-19 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 MC28_0905 4ffaf1988348786473caacecf09937e4 341 Gene3D G3DSA:1.20.1330.10 16 290 4.3E-52 T 14-10-2018 MC28_1645 0f9c28f0a369fb6b68f05aaf443ddf47 305 Gene3D G3DSA:1.10.10.10 4 92 4.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1645 0f9c28f0a369fb6b68f05aaf443ddf47 305 SUPERFAMILY SSF53850 99 297 2.05E-45 T 14-10-2018 MC28_1645 0f9c28f0a369fb6b68f05aaf443ddf47 305 Gene3D G3DSA:3.40.190.290 99 303 4.6E-57 T 14-10-2018 MC28_1645 0f9c28f0a369fb6b68f05aaf443ddf47 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 2.5E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1645 0f9c28f0a369fb6b68f05aaf443ddf47 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.2E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1645 0f9c28f0a369fb6b68f05aaf443ddf47 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.2E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1645 0f9c28f0a369fb6b68f05aaf443ddf47 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.2E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1645 0f9c28f0a369fb6b68f05aaf443ddf47 305 SUPERFAMILY SSF46785 10 94 2.17E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1645 0f9c28f0a369fb6b68f05aaf443ddf47 305 Pfam PF03466 LysR substrate binding domain 99 297 1.1E-47 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 SMART SM00936 276 367 1.4E-21 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 26 256 6.7E-90 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 SUPERFAMILY SSF56601 31 276 1.08E-83 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 SUPERFAMILY SSF69189 268 365 2.55E-20 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 276 366 1.0E-19 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 Gene3D G3DSA:3.40.710.10 6 274 3.0E-99 T 14-10-2018 MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 Gene3D G3DSA:2.60.410.10 276 366 1.8E-19 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 112 129 1.2E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 1.2E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_3368 20aea036df0adddf1de3e5089ac0d0c2 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 139 152 1.2E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 Gene3D G3DSA:1.10.287.130 318 377 1.7E-5 T 14-10-2018 MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 Pfam PF00989 PAS fold 216 315 4.4E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 SUPERFAMILY SSF55874 396 526 3.15E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 Pfam PF17203 Single cache domain 3 39 173 4.2E-22 T 14-10-2018 IPR033463 Single cache domain 3 MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 Gene3D G3DSA:3.30.565.10 393 533 9.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 SUPERFAMILY SSF55785 215 314 6.75E-8 T 14-10-2018 IPR035965 PAS domain superfamily MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 527 9.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 329 374 3.8E-11 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 SUPERFAMILY SSF103190 40 171 8.63E-40 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 Gene3D G3DSA:3.30.450.20 33 174 1.6E-44 T 14-10-2018 MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 Gene3D G3DSA:3.30.450.20 201 317 4.4E-23 T 14-10-2018 MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 1.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 1.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 1.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5299 eb6c4703b42eacbf7ca23baa630460ee 534 SMART SM00387 422 529 1.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1430 84c850852de778d4d235281bab9d80fa 305 Pfam PF01063 Amino-transferase class IV 51 273 1.2E-50 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 MC28_1430 84c850852de778d4d235281bab9d80fa 305 Gene3D G3DSA:3.30.470.10 2 140 8.9E-33 T 14-10-2018 MC28_1430 84c850852de778d4d235281bab9d80fa 305 ProSitePatterns PS00770 Aminotransferases class-IV signature. 199 228 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 MC28_1430 84c850852de778d4d235281bab9d80fa 305 SUPERFAMILY SSF56752 18 296 5.23E-79 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 MC28_1430 84c850852de778d4d235281bab9d80fa 305 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 23 298 1.2E-94 T 14-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 MC28_1430 84c850852de778d4d235281bab9d80fa 305 Gene3D G3DSA:3.20.10.10 143 300 7.5E-57 T 14-10-2018 MC28_0848 66c28a5f6f5c5d34be3928ef57372444 65 Pfam PF00313 'Cold-shock' DNA-binding domain 1 64 9.8E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_0848 66c28a5f6f5c5d34be3928ef57372444 65 PIRSF PIRSF002599 1 65 2.7E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 MC28_0848 66c28a5f6f5c5d34be3928ef57372444 65 SUPERFAMILY SSF50249 1 64 3.05E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_0848 66c28a5f6f5c5d34be3928ef57372444 65 SMART SM00357 2 65 1.3E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 MC28_0848 66c28a5f6f5c5d34be3928ef57372444 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 32 - T 14-10-2018 IPR019844 Cold-shock conserved site MC28_0848 66c28a5f6f5c5d34be3928ef57372444 65 Gene3D G3DSA:2.40.50.140 1 64 1.3E-30 T 14-10-2018 MC28_0848 66c28a5f6f5c5d34be3928ef57372444 65 PRINTS PR00050 Cold shock protein signature 3 18 1.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_0848 66c28a5f6f5c5d34be3928ef57372444 65 PRINTS PR00050 Cold shock protein signature 23 32 1.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_0848 66c28a5f6f5c5d34be3928ef57372444 65 PRINTS PR00050 Cold shock protein signature 38 56 1.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 365 393 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 SUPERFAMILY SSF56281 10 424 4.92E-98 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 Gene3D G3DSA:3.10.20.580 450 556 1.5E-37 T 14-10-2018 MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 Hamap MF_01491 Ribonuclease J [rnj]. 4 556 48.393 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 363 409 2.6E-11 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 1.5E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 Gene3D G3DSA:3.60.15.10 12 443 1.6E-185 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 PIRSF PIRSF004803 1 556 2.6E-244 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 Gene3D G3DSA:3.40.50.10710 208 358 1.6E-185 T 14-10-2018 MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 SMART SM00849 21 216 5.9E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2967 77e3639bba3a1e821ec0c4538ec59043 556 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 554 6.7E-214 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 MC28_4354 60127080c46bc3213b6b9816a6feec61 113 Gene3D G3DSA:2.40.50.480 18 112 2.6E-13 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_4354 60127080c46bc3213b6b9816a6feec61 113 Pfam PF06486 Protein of unknown function (DUF1093) 19 92 2.4E-14 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_4354 60127080c46bc3213b6b9816a6feec61 113 SUPERFAMILY SSF159121 17 110 1.1E-17 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_4354 60127080c46bc3213b6b9816a6feec61 113 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 5 105 1.1E-7 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Pfam PF03147 Ferredoxin-fold anticodon binding domain 712 805 3.2E-30 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Pfam PF03483 B3/4 domain 222 394 4.2E-67 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Gene3D G3DSA:3.30.70.380 713 806 1.3E-31 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 SUPERFAMILY SSF54991 707 805 3.27E-32 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 SMART SM00874 411 479 7.0E-26 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 799 46.593 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 SMART SM00873 221 394 4.1E-92 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 SMART SM00896 712 805 3.9E-45 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 805 6.8E-267 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 SUPERFAMILY SSF56037 208 405 1.28E-71 T 14-10-2018 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Gene3D G3DSA:3.30.56.10 410 483 1.1E-23 T 14-10-2018 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Gene3D G3DSA:3.30.930.10 495 699 3.7E-62 T 14-10-2018 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Gene3D G3DSA:2.40.50.140 40 161 1.2E-68 T 14-10-2018 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 SUPERFAMILY SSF46955 412 483 8.51E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Pfam PF03484 tRNA synthetase B5 domain 414 479 5.6E-18 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 SUPERFAMILY SSF55681 475 695 8.95E-51 T 14-10-2018 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Gene3D G3DSA:3.30.56.10 4 189 1.2E-68 T 14-10-2018 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Pfam PF01588 Putative tRNA binding domain 46 152 4.8E-27 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 Gene3D G3DSA:3.50.40.10 204 405 1.2E-82 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 MC28_3840 973cf07ff1243a6fac6b87ca52ff2f45 806 SUPERFAMILY SSF50249 36 199 6.37E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3777 4659228f5ebe6b15e80689de91904ad7 212 Gene3D G3DSA:1.10.357.10 15 179 1.6E-16 T 14-10-2018 MC28_3777 4659228f5ebe6b15e80689de91904ad7 212 SUPERFAMILY SSF46689 12 66 4.44E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3777 4659228f5ebe6b15e80689de91904ad7 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 56 2.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2807 95ef4033e856bc78f1278e8ecf997478 302 SUPERFAMILY SSF103481 193 280 9.15E-9 T 14-10-2018 MC28_2807 95ef4033e856bc78f1278e8ecf997478 302 Pfam PF00892 EamA-like transporter family 148 279 3.8E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_2807 95ef4033e856bc78f1278e8ecf997478 302 Pfam PF00892 EamA-like transporter family 5 135 2.0E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_2690 66316c3ec2c338465a8604892ed3613a 147 Pfam PF00258 Flavodoxin 6 134 1.7E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 MC28_2690 66316c3ec2c338465a8604892ed3613a 147 Gene3D G3DSA:3.40.50.360 2 146 1.6E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_2690 66316c3ec2c338465a8604892ed3613a 147 SUPERFAMILY SSF52218 3 146 1.77E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_2690 66316c3ec2c338465a8604892ed3613a 147 TIGRFAM TIGR01753 flav_short: flavodoxin 4 143 2.8E-46 T 14-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 MC28_2690 66316c3ec2c338465a8604892ed3613a 147 PRINTS PR00369 Flavodoxin signature 82 92 8.7E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 MC28_2690 66316c3ec2c338465a8604892ed3613a 147 PRINTS PR00369 Flavodoxin signature 5 18 8.7E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 MC28_2690 66316c3ec2c338465a8604892ed3613a 147 PRINTS PR00369 Flavodoxin signature 53 64 8.7E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 MC28_F192 19c1f371bb8993ad7d039297ffefc02b 194 SUPERFAMILY SSF51182 7 191 2.27E-70 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_F192 19c1f371bb8993ad7d039297ffefc02b 194 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 10 183 9.9E-63 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MC28_F192 19c1f371bb8993ad7d039297ffefc02b 194 Gene3D G3DSA:2.60.120.10 6 187 5.2E-70 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_F192 19c1f371bb8993ad7d039297ffefc02b 194 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 7 182 1.0E-97 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MC28_F192 19c1f371bb8993ad7d039297ffefc02b 194 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 12 182 2.1E-67 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MC28_4490 bc87bb0c5d55eeb092a8051e75e5e351 344 Gene3D G3DSA:3.40.190.10 142 262 1.1E-65 T 14-10-2018 MC28_4490 bc87bb0c5d55eeb092a8051e75e5e351 344 Gene3D G3DSA:3.40.190.10 45 313 1.1E-65 T 14-10-2018 MC28_4490 bc87bb0c5d55eeb092a8051e75e5e351 344 SUPERFAMILY SSF53850 42 307 4.16E-48 T 14-10-2018 MC28_4490 bc87bb0c5d55eeb092a8051e75e5e351 344 Pfam PF13343 Bacterial extracellular solute-binding protein 88 329 2.2E-48 T 14-10-2018 MC28_3593 668603f2a9e4cf6bebeb678d267c4f31 117 Pfam PF01219 Prokaryotic diacylglycerol kinase 11 112 1.9E-37 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 MC28_3593 668603f2a9e4cf6bebeb678d267c4f31 117 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 65 76 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 MC28_3593 668603f2a9e4cf6bebeb678d267c4f31 117 Gene3D G3DSA:1.10.3830.10 2 116 5.3E-41 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 MC28_0943 c0771c608b7922fc95a00b263e8b7e94 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 1.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0943 c0771c608b7922fc95a00b263e8b7e94 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0943 c0771c608b7922fc95a00b263e8b7e94 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 1.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0943 c0771c608b7922fc95a00b263e8b7e94 305 Pfam PF00561 alpha/beta hydrolase fold 35 151 4.1E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0943 c0771c608b7922fc95a00b263e8b7e94 305 SUPERFAMILY SSF53474 4 296 1.45E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0943 c0771c608b7922fc95a00b263e8b7e94 305 Gene3D G3DSA:3.40.50.1820 17 301 7.7E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3841 586e6c14062d8ab6fcf04ac55cb1284a 344 SUPERFAMILY SSF46589 16 100 1.2E-21 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 MC28_3841 586e6c14062d8ab6fcf04ac55cb1284a 344 Pfam PF01409 tRNA synthetases class II core domain (F) 93 341 5.2E-112 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 MC28_3841 586e6c14062d8ab6fcf04ac55cb1284a 344 SUPERFAMILY SSF55681 93 342 1.59E-83 T 14-10-2018 MC28_3841 586e6c14062d8ab6fcf04ac55cb1284a 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 5.4E-24 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 MC28_3841 586e6c14062d8ab6fcf04ac55cb1284a 344 Gene3D G3DSA:3.30.930.10 8 343 4.2E-126 T 14-10-2018 MC28_3841 586e6c14062d8ab6fcf04ac55cb1284a 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 342 1.4E-115 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 MC28_3841 586e6c14062d8ab6fcf04ac55cb1284a 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 341 48.957 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 MC28_3849 c045860636ec2af47a1239b741573ae7 205 SUPERFAMILY SSF46689 9 76 1.1E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3849 c045860636ec2af47a1239b741573ae7 205 Gene3D G3DSA:1.10.357.10 6 197 3.5E-46 T 14-10-2018 MC28_3849 c045860636ec2af47a1239b741573ae7 205 Pfam PF14278 Transcriptional regulator C-terminal region 95 173 8.9E-14 T 14-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type MC28_3849 c045860636ec2af47a1239b741573ae7 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 62 2.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3849 c045860636ec2af47a1239b741573ae7 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 3.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3849 c045860636ec2af47a1239b741573ae7 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0067 b2baab97160f62fdaa203495ed133715 111 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 12 103 6.3E-36 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 MC28_0067 b2baab97160f62fdaa203495ed133715 111 Gene3D G3DSA:1.20.58.280 3 109 8.0E-39 T 14-10-2018 MC28_0067 b2baab97160f62fdaa203495ed133715 111 PIRSF PIRSF000699 3 110 3.7E-38 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 MC28_0067 b2baab97160f62fdaa203495ed133715 111 SUPERFAMILY SSF46973 8 104 4.05E-35 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 MC28_0102 d6059b5d02dca18d10fc181e21742c83 46 Gene3D G3DSA:3.10.450.50 2 46 4.6E-6 T 14-10-2018 MC28_1863 f204dec264c7f6ec42b2791b34eed4a1 407 Gene3D G3DSA:3.40.50.150 184 381 7.3E-13 T 14-10-2018 MC28_1863 f204dec264c7f6ec42b2791b34eed4a1 407 SMART SM00422 1 68 1.2E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_1863 f204dec264c7f6ec42b2791b34eed4a1 407 SUPERFAMILY SSF46955 1 113 2.86E-16 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_1863 f204dec264c7f6ec42b2791b34eed4a1 407 Gene3D G3DSA:1.10.1660.10 1 124 4.8E-20 T 14-10-2018 MC28_1863 f204dec264c7f6ec42b2791b34eed4a1 407 Pfam PF13411 MerR HTH family regulatory protein 1 65 2.7E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_1863 f204dec264c7f6ec42b2791b34eed4a1 407 SUPERFAMILY SSF53335 224 336 2.41E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1863 f204dec264c7f6ec42b2791b34eed4a1 407 Pfam PF13847 Methyltransferase domain 229 347 4.0E-7 T 14-10-2018 IPR025714 Methyltransferase domain MC28_4569 a7609c4f982493499917170b10a4bb92 321 SUPERFAMILY SSF56655 2 313 1.53E-112 T 14-10-2018 MC28_4569 a7609c4f982493499917170b10a4bb92 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 2 321 3.7E-155 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 MC28_4569 a7609c4f982493499917170b10a4bb92 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 310 1.1E-144 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 MC28_4569 a7609c4f982493499917170b10a4bb92 321 PIRSF PIRSF004532 1 321 1.0E-151 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 MC28_4569 a7609c4f982493499917170b10a4bb92 321 Gene3D G3DSA:3.40.190.90 122 284 7.8E-136 T 14-10-2018 MC28_4569 a7609c4f982493499917170b10a4bb92 321 Gene3D G3DSA:3.30.540.10 7 310 7.8E-136 T 14-10-2018 MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 SUPERFAMILY SSF161093 269 440 1.96E-50 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 SMART SM00116 133 186 1.5 T 14-10-2018 IPR000644 CBS domain MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 SMART SM00116 197 245 3.7E-4 T 14-10-2018 IPR000644 CBS domain MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 Pfam PF01769 Divalent cation transporter 312 434 7.6E-29 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 Pfam PF00571 CBS domain 192 244 1.3E-6 T 14-10-2018 IPR000644 CBS domain MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 Pfam PF00571 CBS domain 127 184 2.1E-5 T 14-10-2018 IPR000644 CBS domain MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 441 2.3E-109 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 Gene3D G3DSA:1.10.357.20 263 441 1.8E-56 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 SUPERFAMILY SSF54631 125 265 1.26E-29 T 14-10-2018 MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 Gene3D G3DSA:1.25.60.10 1 121 2.1E-7 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 SUPERFAMILY SSF158791 17 122 1.31E-10 T 14-10-2018 MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 Pfam PF03448 MgtE intracellular N domain 25 123 1.7E-9 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 SMART SM00924 23 126 1.3E-6 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain MC28_1101 c81340d07e6dfa891fe656e5b111de90 442 Gene3D G3DSA:3.10.580.10 122 250 5.8E-38 T 14-10-2018 MC28_4691 1966670fb950bc025f7bc2c7be1898e7 167 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 9 167 2.3E-67 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 MC28_4691 1966670fb950bc025f7bc2c7be1898e7 167 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 9 167 30.048 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 MC28_4691 1966670fb950bc025f7bc2c7be1898e7 167 SUPERFAMILY SSF75217 10 165 5.56E-60 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases MC28_4691 1966670fb950bc025f7bc2c7be1898e7 167 Pfam PF02590 Predicted SPOUT methyltransferase 10 166 1.7E-56 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 MC28_4691 1966670fb950bc025f7bc2c7be1898e7 167 PIRSF PIRSF004505 9 167 7.3E-52 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 MC28_4691 1966670fb950bc025f7bc2c7be1898e7 167 Gene3D G3DSA:3.40.1280.10 9 167 7.4E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MC28_0103 294a4512bd98a3e3bc5de49681c7c83d 81 SUPERFAMILY SSF54427 2 79 2.19E-17 T 14-10-2018 IPR032710 NTF2-like domain superfamily MC28_0103 294a4512bd98a3e3bc5de49681c7c83d 81 Gene3D G3DSA:3.10.450.50 1 81 3.0E-19 T 14-10-2018 MC28_3781 56d8d50c2029aa030d558d9a7f8fbf67 404 Pfam PF07969 Amidohydrolase family 46 392 1.1E-36 T 14-10-2018 IPR013108 Amidohydrolase 3 MC28_3781 56d8d50c2029aa030d558d9a7f8fbf67 404 Gene3D G3DSA:3.20.20.140 57 351 1.6E-114 T 14-10-2018 MC28_3781 56d8d50c2029aa030d558d9a7f8fbf67 404 SUPERFAMILY SSF51338 18 77 3.37E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_3781 56d8d50c2029aa030d558d9a7f8fbf67 404 SUPERFAMILY SSF51556 57 361 2.08E-72 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_3781 56d8d50c2029aa030d558d9a7f8fbf67 404 Gene3D G3DSA:2.30.40.10 19 391 1.6E-114 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 330 2.2E-74 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PIRSF PIRSF000350 3 459 1.4E-99 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 Gene3D G3DSA:3.50.50.60 152 273 1.9E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 Gene3D G3DSA:3.30.390.30 348 468 6.5E-43 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 468 5.5E-176 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 6.9E-42 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 6.9E-42 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 6.9E-42 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 6.9E-42 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 6.9E-42 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 Gene3D G3DSA:3.50.50.60 13 335 1.9E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 SUPERFAMILY SSF51905 8 340 1.18E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 SUPERFAMILY SSF55424 346 468 9.28E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 7.5E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 6.5E-76 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 6.5E-76 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 6.5E-76 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 6.5E-76 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 6.5E-76 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 6.5E-76 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 6.5E-76 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 6.5E-76 T 14-10-2018 MC28_3258 73e7b07761a2863e55e5b2bbc7206339 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 6.5E-76 T 14-10-2018 MC28_1716 ebea2233c581ff713e531ee39e932a1c 291 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 113 287 2.3E-27 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_1716 ebea2233c581ff713e531ee39e932a1c 291 Gene3D G3DSA:3.30.300.210 129 290 2.5E-26 T 14-10-2018 IPR038501 Spore germination GerAC superfamily MC28_1716 ebea2233c581ff713e531ee39e932a1c 291 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 290 1.0E-49 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 Pfam PF00206 Lyase 47 313 2.2E-42 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 Gene3D G3DSA:1.20.200.10 133 472 1.5E-127 T 14-10-2018 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 Gene3D G3DSA:1.10.40.30 376 454 1.5E-127 T 14-10-2018 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 TIGRFAM TIGR00838 argH: argininosuccinate lyase 37 477 8.6E-97 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 SUPERFAMILY SSF48557 39 476 9.9E-95 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 PRINTS PR00145 Argininosuccinate lyase family signature 245 269 3.7E-26 T 14-10-2018 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 PRINTS PR00145 Argininosuccinate lyase family signature 156 176 3.7E-26 T 14-10-2018 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 PRINTS PR00145 Argininosuccinate lyase family signature 115 137 3.7E-26 T 14-10-2018 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 PRINTS PR00145 Argininosuccinate lyase family signature 289 305 3.7E-26 T 14-10-2018 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 PRINTS PR00145 Argininosuccinate lyase family signature 207 223 3.7E-26 T 14-10-2018 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 PRINTS PR00149 Fumarate lyase superfamily signature 245 272 4.2E-17 T 14-10-2018 IPR000362 Fumarate lyase family MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 PRINTS PR00149 Fumarate lyase superfamily signature 289 305 4.2E-17 T 14-10-2018 IPR000362 Fumarate lyase family MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 PRINTS PR00149 Fumarate lyase superfamily signature 116 134 4.2E-17 T 14-10-2018 IPR000362 Fumarate lyase family MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 PRINTS PR00149 Fumarate lyase superfamily signature 161 179 4.2E-17 T 14-10-2018 IPR000362 Fumarate lyase family MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 Pfam PF14698 Argininosuccinate lyase C-terminal 380 452 7.3E-12 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_2698 7683091478ad4fb659c60f6e884c90bf 508 Gene3D G3DSA:1.10.275.10 48 243 1.5E-127 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 SUPERFAMILY SSF55874 294 459 1.7E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 458 9.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 SMART SM00387 349 461 4.7E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 Gene3D G3DSA:1.10.8.500 186 233 9.2E-10 T 14-10-2018 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 SUPERFAMILY SSF158472 186 233 4.32E-11 T 14-10-2018 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 Gene3D G3DSA:3.30.565.10 309 465 2.7E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 SMART SM00388 238 304 3.7E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 SMART SM00304 185 237 4.8E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 Pfam PF00672 HAMP domain 187 233 4.5E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 Gene3D G3DSA:1.10.287.130 234 304 5.2E-24 T 14-10-2018 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 303 3.0E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0530 e2940ee18a063c8d6f1b58c1f65cc98b 466 SUPERFAMILY SSF47384 221 304 2.16E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_4855 ca887ba7c53142f3967062ae7d0af2e1 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 28.213 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 MC28_4855 ca887ba7c53142f3967062ae7d0af2e1 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 9.7E-65 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4855 ca887ba7c53142f3967062ae7d0af2e1 145 Gene3D G3DSA:3.90.1180.10 1 143 6.5E-61 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_4855 ca887ba7c53142f3967062ae7d0af2e1 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 MC28_4855 ca887ba7c53142f3967062ae7d0af2e1 145 PIRSF PIRSF002181 1 143 1.8E-50 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 MC28_4855 ca887ba7c53142f3967062ae7d0af2e1 145 SUPERFAMILY SSF52161 5 143 1.11E-59 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_4855 ca887ba7c53142f3967062ae7d0af2e1 145 Pfam PF00572 Ribosomal protein L13 15 139 1.0E-56 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 MC28_2027 6481cb5c0c255a0507b9db8b0b4e8e6a 110 Gene3D G3DSA:3.10.20.440 7 103 2.0E-22 T 14-10-2018 MC28_2027 6481cb5c0c255a0507b9db8b0b4e8e6a 110 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 95 2.9E-26 T 14-10-2018 MC28_2027 6481cb5c0c255a0507b9db8b0b4e8e6a 110 SUPERFAMILY SSF54292 19 109 3.15E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 MC28_0481 a1916577c104a1903055d03cd0f4dab0 644 Gene3D G3DSA:3.40.50.720 14 184 1.8E-26 T 14-10-2018 MC28_0481 a1916577c104a1903055d03cd0f4dab0 644 Gene3D G3DSA:1.10.490.140 269 600 1.1E-48 T 14-10-2018 MC28_0481 a1916577c104a1903055d03cd0f4dab0 644 SUPERFAMILY SSF69572 47 209 8.04E-6 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 MC28_0481 a1916577c104a1903055d03cd0f4dab0 644 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 261 644 3.0E-143 T 14-10-2018 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component MC28_0481 a1916577c104a1903055d03cd0f4dab0 644 Gene3D G3DSA:3.30.160.660 407 546 1.1E-48 T 14-10-2018 MC28_0481 a1916577c104a1903055d03cd0f4dab0 644 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 63 232 2.5E-44 T 14-10-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain MC28_0481 a1916577c104a1903055d03cd0f4dab0 644 Gene3D G3DSA:2.40.50.820 291 370 1.1E-48 T 14-10-2018 MC28_0481 a1916577c104a1903055d03cd0f4dab0 644 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 261 599 1.3E-89 T 14-10-2018 IPR003776 YcaO-like domain MC28_G298 9f614342a5dcff712f113ab686191cbf 140 SUPERFAMILY SSF159121 46 138 1.96E-29 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_G298 9f614342a5dcff712f113ab686191cbf 140 Gene3D G3DSA:2.40.50.480 46 140 3.2E-34 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_G298 9f614342a5dcff712f113ab686191cbf 140 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 29 137 1.4E-22 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_G298 9f614342a5dcff712f113ab686191cbf 140 Pfam PF06486 Protein of unknown function (DUF1093) 49 127 3.4E-26 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 SUPERFAMILY SSF49265 599 690 8.66E-14 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 SMART SM01276 81 374 1.2E-97 T 14-10-2018 IPR031161 Peptidase family M60 domain MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 SMART SM00060 605 678 1.5E-8 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 Gene3D G3DSA:2.60.120.1250 42 168 2.5E-41 T 14-10-2018 MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 Gene3D G3DSA:1.10.390.30 302 461 1.2E-57 T 14-10-2018 MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 Gene3D G3DSA:1.10.1740.210 169 300 6.0E-41 T 14-10-2018 MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 163 424 2.8E-56 T 14-10-2018 IPR031161 Peptidase family M60 domain MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 Pfam PF17291 N-terminal domain of M60-like peptidases 78 153 1.8E-12 T 14-10-2018 IPR035423 M60-like domain, N-terminal MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 Gene3D G3DSA:2.60.40.10 603 689 1.8E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 SMART SM00495 696 742 0.0011 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 SUPERFAMILY SSF51055 698 740 1.44E-5 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 Gene3D G3DSA:2.10.10.20 696 743 3.2E-8 T 14-10-2018 MC28_F124 b925065857afd1b2b67fbef60d14fe52 746 Pfam PF03272 Putative mucin or carbohydrate-binding module 476 589 8.4E-28 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 PIRSF PIRSF006809 1 418 7.4E-146 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.8E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 274 292 1.8E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 Pfam PF13167 GTP-binding GTPase N-terminal 24 110 6.9E-35 T 14-10-2018 IPR025121 GTPase HflX, N-terminal MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 Gene3D G3DSA:3.40.50.11060 18 136 1.4E-41 T 14-10-2018 MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 Pfam PF16360 GTP-binding GTPase Middle Region 112 192 3.0E-26 T 14-10-2018 IPR032305 GTP-binding protein, middle domain MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 SUPERFAMILY SSF52540 198 372 2.26E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 Hamap MF_00900 GTPase HflX [hflX]. 25 391 46.93 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 7 361 1.3E-139 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 Gene3D G3DSA:3.40.50.300 197 369 1.3E-35 T 14-10-2018 MC28_1016 4193dfab4c5634b7b834c28f874a1ebf 419 Pfam PF01926 50S ribosome-binding GTPase 200 325 1.1E-17 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_G129 ad11d55b3f125626b385e98c66994095 66 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 22 31 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_G129 ad11d55b3f125626b385e98c66994095 66 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 40 54 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_G129 ad11d55b3f125626b385e98c66994095 66 Gene3D G3DSA:1.10.8.910 8 66 3.0E-30 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily MC28_G129 ad11d55b3f125626b385e98c66994095 66 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 7 61 3.1E-22 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 MC28_0557 989bdba193244248081bab05d480331d 260 Pfam PF00455 DeoR C terminal sensor domain 77 240 1.6E-42 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain MC28_0557 989bdba193244248081bab05d480331d 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 1.6E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_0557 989bdba193244248081bab05d480331d 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 1.6E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_0557 989bdba193244248081bab05d480331d 260 SUPERFAMILY SSF46785 6 62 3.11E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0557 989bdba193244248081bab05d480331d 260 Gene3D G3DSA:1.10.10.10 1 56 2.6E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0557 989bdba193244248081bab05d480331d 260 SMART SM00420 8 60 4.6E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_0557 989bdba193244248081bab05d480331d 260 SUPERFAMILY SSF100950 75 241 1.2E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_0557 989bdba193244248081bab05d480331d 260 SMART SM01134 75 241 3.9E-56 T 14-10-2018 MC28_0557 989bdba193244248081bab05d480331d 260 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 3.9E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_3724 cf178ce6f43b3a5200fcdf6932c35d30 215 Pfam PF03475 3-alpha domain 171 213 3.9E-12 T 14-10-2018 IPR005163 3-alpha domain MC28_3724 cf178ce6f43b3a5200fcdf6932c35d30 215 SUPERFAMILY SSF50800 5 213 1.15E-67 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily MC28_3724 cf178ce6f43b3a5200fcdf6932c35d30 215 Gene3D G3DSA:2.40.33.20 2 215 2.2E-69 T 14-10-2018 MC28_3724 cf178ce6f43b3a5200fcdf6932c35d30 215 Pfam PF03473 MOSC domain 50 161 9.6E-21 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 Hamap MF_00577 Urocanate hydratase [hutU]. 5 552 51.671 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 Pfam PF17391 Urocanase N-terminal domain 8 134 2.0E-63 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 Gene3D G3DSA:3.40.50.10730 140 352 3.1E-97 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 PIRSF PIRSF001423 1 552 8.9E-303 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 Pfam PF17392 Urocanase C-terminal domain 348 542 1.4E-95 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 SUPERFAMILY SSF111326 5 551 2.35E-266 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 TIGRFAM TIGR01228 hutU: urocanate hydratase 6 550 0.0 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 ProSitePatterns PS01233 Urocanase signature. 438 453 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 Gene3D G3DSA:3.40.1770.10 353 552 7.1E-94 T 14-10-2018 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 Gene3D G3DSA:3.40.1770.10 2 139 1.6E-64 T 14-10-2018 MC28_2795 38fa96d2b05f28b3ffc80e54069849f6 552 Pfam PF01175 Urocanase Rossmann-like domain 137 345 1.9E-92 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 SUPERFAMILY SSF47384 157 235 4.71E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 SMART SM00387 278 382 1.9E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 Gene3D G3DSA:3.30.565.10 231 382 1.3E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 Gene3D G3DSA:1.10.287.130 174 230 9.9E-16 T 14-10-2018 MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 SMART SM00388 171 237 1.3E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 Pfam PF00512 His Kinase A (phospho-acceptor) domain 173 235 1.3E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 362 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 381 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 SUPERFAMILY SSF55874 228 382 5.37E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2677 bdc2225df4a4d8e305e28c023ea5fbb3 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 381 1.8E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3739 6873ce5e03bfff315d8a1e4d9cd04d05 248 Gene3D G3DSA:2.70.70.10 117 246 3.8E-22 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_3739 6873ce5e03bfff315d8a1e4d9cd04d05 248 SUPERFAMILY SSF51261 106 244 2.46E-21 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_3739 6873ce5e03bfff315d8a1e4d9cd04d05 248 Pfam PF01551 Peptidase family M23 148 241 9.3E-22 T 14-10-2018 IPR016047 Peptidase M23 MC28_2306 361789d2cd007d6d46c08f6ce7d32c4c 341 Gene3D G3DSA:3.30.420.40 6 325 2.1E-27 T 14-10-2018 MC28_2306 361789d2cd007d6d46c08f6ce7d32c4c 341 Gene3D G3DSA:3.30.420.40 171 308 2.1E-27 T 14-10-2018 MC28_2306 361789d2cd007d6d46c08f6ce7d32c4c 341 Pfam PF06406 StbA protein 136 311 5.6E-5 T 14-10-2018 IPR009440 Plasmid segregation protein ParM/StbA MC28_2306 361789d2cd007d6d46c08f6ce7d32c4c 341 SUPERFAMILY SSF53067 5 166 1.42E-7 T 14-10-2018 MC28_2486 b5b58250cef7d1ddb277c2ee217991c1 332 Gene3D G3DSA:1.10.240.10 196 296 2.1E-108 T 14-10-2018 MC28_2486 b5b58250cef7d1ddb277c2ee217991c1 332 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 328 8.8E-80 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 MC28_2486 b5b58250cef7d1ddb277c2ee217991c1 332 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_2486 b5b58250cef7d1ddb277c2ee217991c1 332 Pfam PF00579 tRNA synthetases class I (W and Y) 5 281 2.5E-54 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_2486 b5b58250cef7d1ddb277c2ee217991c1 332 Gene3D G3DSA:3.40.50.620 6 327 2.1E-108 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_2486 b5b58250cef7d1ddb277c2ee217991c1 332 SUPERFAMILY SSF52374 5 328 1.38E-80 T 14-10-2018 MC28_2486 b5b58250cef7d1ddb277c2ee217991c1 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 6.4E-12 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 MC28_2486 b5b58250cef7d1ddb277c2ee217991c1 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 6.4E-12 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 MC28_2486 b5b58250cef7d1ddb277c2ee217991c1 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 6.4E-12 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 MC28_3351 81d0afbf1a8c49f4c0160e079a392d31 172 Gene3D G3DSA:1.10.3450.10 8 107 3.1E-15 T 14-10-2018 MC28_3351 81d0afbf1a8c49f4c0160e079a392d31 172 Pfam PF03745 Domain of unknown function (DUF309) 6 66 4.9E-22 T 14-10-2018 IPR005500 Protein of unknown function DUF309 MC28_3351 81d0afbf1a8c49f4c0160e079a392d31 172 SUPERFAMILY SSF140663 1 129 1.31E-33 T 14-10-2018 IPR023203 TTHA0068-like superfamily MC28_D196 5c60dad278b313be8cc64f9de883d90d 170 Pfam PF17631 Family of unknown function (DUF5512) 31 170 4.5E-48 T 14-10-2018 IPR020257 Protein of unknown function DUF5512 MC28_D196 5c60dad278b313be8cc64f9de883d90d 170 ProDom PD275198 PLASMID LIPOPROTEIN PALMITATE MEMBRANE PXO2-32/BXB0031/GBAA_PXO2_0031 PRECURSOR SIGNAL 13 170 1.0E-39 T 14-10-2018 IPR020257 Protein of unknown function DUF5512 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 SUPERFAMILY SSF69360 32 135 2.26E-16 T 14-10-2018 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Pfam PF01473 Putative cell wall binding repeat 285 301 0.0094 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Pfam PF01473 Putative cell wall binding repeat 305 322 0.016 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Pfam PF01473 Putative cell wall binding repeat 33 49 0.0088 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 PRINTS PR00117 Barnase signature 873 890 4.3E-35 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 PRINTS PR00117 Barnase signature 853 870 4.3E-35 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 PRINTS PR00117 Barnase signature 893 911 4.3E-35 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 PRINTS PR00117 Barnase signature 914 933 4.3E-35 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 PRINTS PR00117 Barnase signature 936 954 4.3E-35 T 14-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Pfam PF14449 Pre-toxin TG 767 826 1.2E-6 T 14-10-2018 IPR027797 Pre-toxin TG domain MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Pfam PF00545 ribonuclease 866 953 3.7E-21 T 14-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Gene3D G3DSA:2.10.270.20 343 423 3.0E-10 T 14-10-2018 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Gene3D G3DSA:2.10.270.10 236 342 1.4E-23 T 14-10-2018 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 SUPERFAMILY SSF53933 851 955 3.12E-32 T 14-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 SUPERFAMILY SSF69360 264 410 7.69E-39 T 14-10-2018 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Gene3D G3DSA:2.30.30.40 424 461 3.5E-5 T 14-10-2018 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Gene3D G3DSA:3.10.450.30 842 956 3.2E-43 T 14-10-2018 MC28_F275 38c6ee78ee69250cf2b716241e6bfdf2 956 Gene3D G3DSA:2.10.270.10 19 145 2.6E-13 T 14-10-2018 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 Gene3D G3DSA:1.10.460.10 165 601 7.0E-133 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 SUPERFAMILY SSF56712 3 604 2.22E-161 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 SMART SM00436 131 226 3.5E-32 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 104 117 3.4E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 3.4E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 317 326 3.4E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 3.4E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 Gene3D G3DSA:2.70.20.10 220 486 7.0E-133 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 Pfam PF01751 Toprim domain 3 139 1.2E-17 T 14-10-2018 IPR006171 TOPRIM domain MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 Gene3D G3DSA:1.10.290.10 284 412 7.0E-133 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 701 2.8E-184 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 SMART SM00493 2 130 2.8E-16 T 14-10-2018 IPR006171 TOPRIM domain MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 326 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 Pfam PF01131 DNA topoisomerase 159 590 1.0E-97 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 SMART SM00437 275 556 4.8E-71 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 Gene3D G3DSA:3.40.50.140 2 159 3.3E-50 T 14-10-2018 MC28_D048 2e86f55baa1894bb6e9da41fac681d6a 715 Pfam PF13342 C-terminal repeat of topoisomerase 652 710 2.1E-14 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat MC28_2582 756833414b105230a81eb883008f055f 320 SUPERFAMILY SSF46785 1 63 6.62E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2582 756833414b105230a81eb883008f055f 320 Gene3D G3DSA:1.10.10.10 1 63 3.1E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2582 756833414b105230a81eb883008f055f 320 Pfam PF08279 HTH domain 6 60 4.6E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 MC28_4695 32eab27f2798c324658a10850a97c36d 278 Gene3D G3DSA:3.30.310.160 70 179 3.5E-58 T 14-10-2018 MC28_4695 32eab27f2798c324658a10850a97c36d 278 Gene3D G3DSA:3.10.450.660 47 256 3.5E-58 T 14-10-2018 MC28_4695 32eab27f2798c324658a10850a97c36d 278 Pfam PF09648 YycH protein 32 252 8.7E-57 T 14-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 Gene3D G3DSA:1.50.10.10 87 443 5.7E-149 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 PRINTS PR00735 Glycosyl hydrolase family 8 signature 136 149 3.3E-30 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 PRINTS PR00735 Glycosyl hydrolase family 8 signature 333 342 3.3E-30 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 PRINTS PR00735 Glycosyl hydrolase family 8 signature 304 315 3.3E-30 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 PRINTS PR00735 Glycosyl hydrolase family 8 signature 261 278 3.3E-30 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 PRINTS PR00735 Glycosyl hydrolase family 8 signature 198 216 3.3E-30 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 PRINTS PR00735 Glycosyl hydrolase family 8 signature 429 443 3.3E-30 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 198 216 - T 14-10-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 Pfam PF01270 Glycosyl hydrolases family 8 100 441 3.1E-27 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MC28_1874 7126ea4cddbc84cdd4d7568158f82686 470 SUPERFAMILY SSF48208 68 450 9.36E-105 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 MC28_3269 1191d9860e9e088fe61a12fdba679559 376 Pfam PF01546 Peptidase family M20/M25/M40 67 370 1.5E-26 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_3269 1191d9860e9e088fe61a12fdba679559 376 Pfam PF07687 Peptidase dimerisation domain 180 269 1.2E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_3269 1191d9860e9e088fe61a12fdba679559 376 SUPERFAMILY SSF55031 178 283 6.41E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_3269 1191d9860e9e088fe61a12fdba679559 376 Gene3D G3DSA:3.30.70.360 173 287 4.5E-117 T 14-10-2018 MC28_3269 1191d9860e9e088fe61a12fdba679559 376 PIRSF PIRSF005962 1 376 1.2E-104 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_3269 1191d9860e9e088fe61a12fdba679559 376 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 3 372 62.261 T 14-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 MC28_3269 1191d9860e9e088fe61a12fdba679559 376 Gene3D G3DSA:3.40.630.10 7 358 4.5E-117 T 14-10-2018 MC28_3269 1191d9860e9e088fe61a12fdba679559 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 361 7.1E-89 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_3269 1191d9860e9e088fe61a12fdba679559 376 SUPERFAMILY SSF53187 4 369 3.9E-66 T 14-10-2018 MC28_4901 eb0cb8ddc64d995dc7c5dccbed5cefec 268 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 48 263 5.0E-70 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 MC28_4901 eb0cb8ddc64d995dc7c5dccbed5cefec 268 SUPERFAMILY SSF53850 42 265 5.6E-68 T 14-10-2018 MC28_4901 eb0cb8ddc64d995dc7c5dccbed5cefec 268 Gene3D G3DSA:3.40.190.10 122 227 5.0E-84 T 14-10-2018 MC28_4901 eb0cb8ddc64d995dc7c5dccbed5cefec 268 PIRSF PIRSF004846 1 268 1.1E-90 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 MC28_4901 eb0cb8ddc64d995dc7c5dccbed5cefec 268 Gene3D G3DSA:3.40.190.10 45 264 5.0E-84 T 14-10-2018 MC28_4901 eb0cb8ddc64d995dc7c5dccbed5cefec 268 Pfam PF13531 Bacterial extracellular solute-binding protein 43 264 2.1E-49 T 14-10-2018 MC28_4263 d5b8e1d667befc0ae159cf693d1006c9 215 Pfam PF14378 PAP2 superfamily 51 192 1.5E-10 T 14-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 MC28_4263 d5b8e1d667befc0ae159cf693d1006c9 215 SUPERFAMILY SSF48317 15 210 2.81E-6 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily MC28_F087 0189f09d9d9a5340d5dcd80054c13559 468 SUPERFAMILY SSF102114 96 418 3.66E-51 T 14-10-2018 MC28_F087 0189f09d9d9a5340d5dcd80054c13559 468 Pfam PF13353 4Fe-4S single cluster domain 106 238 2.5E-12 T 14-10-2018 MC28_F087 0189f09d9d9a5340d5dcd80054c13559 468 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 105 116 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_F087 0189f09d9d9a5340d5dcd80054c13559 468 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 349 437 3.7E-18 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain MC28_F087 0189f09d9d9a5340d5dcd80054c13559 468 Gene3D G3DSA:3.20.20.70 97 457 3.4E-71 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_F087 0189f09d9d9a5340d5dcd80054c13559 468 TIGRFAM TIGR03974 rSAM_six_Cys: SCIFF radical SAM maturase 2 453 1.5E-220 T 14-10-2018 IPR024025 SCIFF radical SAM maturase MC28_F087 0189f09d9d9a5340d5dcd80054c13559 468 Pfam PF04055 Radical SAM superfamily 104 250 5.4E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_2727 3baec4b1cfef1405fa8e3e57de6abb8a 460 Gene3D G3DSA:1.20.1740.10 15 459 1.4E-131 T 14-10-2018 MC28_2727 3baec4b1cfef1405fa8e3e57de6abb8a 460 Pfam PF13520 Amino acid permease 22 442 6.0E-62 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_2727 3baec4b1cfef1405fa8e3e57de6abb8a 460 PIRSF PIRSF006060 5 458 4.1E-95 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_3574 22f325c66f4ecad6688b8c432e698dc4 292 Gene3D G3DSA:3.30.70.120 202 277 1.6E-25 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_3574 22f325c66f4ecad6688b8c432e698dc4 292 PIRSF PIRSF006483 1 291 6.7E-90 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_3574 22f325c66f4ecad6688b8c432e698dc4 292 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 230 284 3.4E-21 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_3574 22f325c66f4ecad6688b8c432e698dc4 292 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 18 224 7.7E-66 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_1760 86c9cb0cd6a8279e80edb552b3054d77 408 Pfam PF12833 Helix-turn-helix domain 325 403 2.2E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_1760 86c9cb0cd6a8279e80edb552b3054d77 408 SMART SM00342 319 402 2.2E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_1760 86c9cb0cd6a8279e80edb552b3054d77 408 Gene3D G3DSA:1.10.10.60 353 406 3.7E-17 T 14-10-2018 MC28_1760 86c9cb0cd6a8279e80edb552b3054d77 408 Gene3D G3DSA:1.10.10.60 299 352 6.2E-13 T 14-10-2018 MC28_1760 86c9cb0cd6a8279e80edb552b3054d77 408 SUPERFAMILY SSF46689 302 353 3.58E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1760 86c9cb0cd6a8279e80edb552b3054d77 408 SUPERFAMILY SSF46689 356 406 2.06E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1760 86c9cb0cd6a8279e80edb552b3054d77 408 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 356 398 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 Gene3D G3DSA:1.10.240.10 223 325 1.2E-39 T 14-10-2018 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 SUPERFAMILY SSF55174 321 417 1.96E-24 T 14-10-2018 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 SUPERFAMILY SSF52374 2 323 1.5E-107 T 14-10-2018 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 Gene3D G3DSA:3.40.50.620 1 222 5.4E-89 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 Pfam PF00579 tRNA synthetases class I (W and Y) 28 323 3.2E-87 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 418 46.768 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 Gene3D G3DSA:3.10.290.10 326 418 3.6E-35 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 7.6E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 7.6E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 7.6E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 7.6E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 Pfam PF01479 S4 domain 356 399 3.8E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 417 2.8E-139 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_3937 de2c79d9c46565ce94c870cf608adb08 418 SMART SM00363 353 414 2.4E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_2491 48e22e3c7535016b4cf7623dc4d6d99f 182 SUPERFAMILY SSF53335 1 157 4.74E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2491 48e22e3c7535016b4cf7623dc4d6d99f 182 Pfam PF08241 Methyltransferase domain 2 83 8.5E-11 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_2491 48e22e3c7535016b4cf7623dc4d6d99f 182 Gene3D G3DSA:3.40.50.150 1 180 3.9E-32 T 14-10-2018 MC28_3636 cb00edc4840054a4f53f6d686993e9e5 216 Gene3D G3DSA:1.10.287.860 156 208 4.7E-22 T 14-10-2018 MC28_3636 cb00edc4840054a4f53f6d686993e9e5 216 SUPERFAMILY SSF81301 11 202 1.24E-56 T 14-10-2018 MC28_3636 cb00edc4840054a4f53f6d686993e9e5 216 SMART SM00954 50 173 2.7E-46 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 MC28_3636 cb00edc4840054a4f53f6d686993e9e5 216 Gene3D G3DSA:3.30.460.10 1 155 6.7E-50 T 14-10-2018 MC28_3636 cb00edc4840054a4f53f6d686993e9e5 216 Pfam PF04607 Region found in RelA / SpoT proteins 50 171 2.0E-38 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SUPERFAMILY SSF158911 497 632 4.19E-47 T 14-10-2018 IPR037250 NEAT domain superfamily MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SUPERFAMILY SSF158911 348 479 5.49E-47 T 14-10-2018 IPR037250 NEAT domain superfamily MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SMART SM00725 674 795 5.3E-39 T 14-10-2018 IPR006635 NEAT domain MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SMART SM00725 20 141 6.0E-46 T 14-10-2018 IPR006635 NEAT domain MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SMART SM00725 505 626 3.0E-41 T 14-10-2018 IPR006635 NEAT domain MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SMART SM00725 183 304 2.8E-32 T 14-10-2018 IPR006635 NEAT domain MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SMART SM00725 352 473 1.9E-43 T 14-10-2018 IPR006635 NEAT domain MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SUPERFAMILY SSF158911 664 800 7.72E-47 T 14-10-2018 IPR037250 NEAT domain superfamily MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Gene3D G3DSA:2.60.40.1850 665 792 8.6E-49 T 14-10-2018 MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 TIGRFAM TIGR03063 srtB_target: sortase B cell surface sorting signal 848 876 4.9E-13 T 14-10-2018 IPR017502 Sortase B cell surface sorting signal MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SUPERFAMILY SSF158911 172 309 4.97E-43 T 14-10-2018 IPR037250 NEAT domain superfamily MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Gene3D G3DSA:2.60.40.1850 165 321 1.4E-44 T 14-10-2018 MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Gene3D G3DSA:2.60.40.1850 487 625 4.6E-49 T 14-10-2018 MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Gene3D G3DSA:2.60.40.1850 7 140 1.8E-48 T 14-10-2018 MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Gene3D G3DSA:2.60.40.1850 333 472 3.7E-49 T 14-10-2018 MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 SUPERFAMILY SSF158911 2 147 8.89E-50 T 14-10-2018 IPR037250 NEAT domain superfamily MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Pfam PF05031 Iron Transport-associated domain 350 466 4.3E-36 T 14-10-2018 IPR006635 NEAT domain MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Pfam PF05031 Iron Transport-associated domain 181 297 1.8E-32 T 14-10-2018 IPR006635 NEAT domain MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Pfam PF05031 Iron Transport-associated domain 673 789 1.7E-34 T 14-10-2018 IPR006635 NEAT domain MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Pfam PF05031 Iron Transport-associated domain 504 619 1.1E-36 T 14-10-2018 IPR006635 NEAT domain MC28_3827 d05c7f7c0a64d9527a59482fde354c36 880 Pfam PF05031 Iron Transport-associated domain 19 134 3.1E-37 T 14-10-2018 IPR006635 NEAT domain MC28_0115 2386a5446bab5229be80c7284cb35afc 400 PRINTS PR01035 Tetracycline resistance protein signature 136 158 1.5E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0115 2386a5446bab5229be80c7284cb35afc 400 PRINTS PR01035 Tetracycline resistance protein signature 21 37 1.5E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0115 2386a5446bab5229be80c7284cb35afc 400 PRINTS PR01035 Tetracycline resistance protein signature 78 102 1.5E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0115 2386a5446bab5229be80c7284cb35afc 400 PRINTS PR01035 Tetracycline resistance protein signature 164 184 1.5E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0115 2386a5446bab5229be80c7284cb35afc 400 PRINTS PR01035 Tetracycline resistance protein signature 341 364 1.5E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0115 2386a5446bab5229be80c7284cb35afc 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_0115 2386a5446bab5229be80c7284cb35afc 400 Gene3D G3DSA:1.20.1250.20 3 393 1.7E-75 T 14-10-2018 MC28_0115 2386a5446bab5229be80c7284cb35afc 400 SUPERFAMILY SSF103473 8 393 7.06E-76 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0115 2386a5446bab5229be80c7284cb35afc 400 Pfam PF07690 Major Facilitator Superfamily 16 357 3.2E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2371 8951524f8ccf88fb62014111c2c829c2 329 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 186 1.2E-21 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_2371 8951524f8ccf88fb62014111c2c829c2 329 SUPERFAMILY SSF53901 4 328 1.84E-55 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_2371 8951524f8ccf88fb62014111c2c829c2 329 Gene3D G3DSA:3.40.47.10 1 329 5.2E-100 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_2371 8951524f8ccf88fb62014111c2c829c2 329 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 241 329 5.3E-27 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_2453 e02dcb35986e93fe486cb790a0041e81 275 SUPERFAMILY SSF54060 57 268 4.94E-60 T 14-10-2018 MC28_2453 e02dcb35986e93fe486cb790a0041e81 275 Pfam PF04231 Endonuclease I 59 268 1.0E-44 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 MC28_0768 3fd2fde4af271b029406f028d3207923 239 Gene3D G3DSA:3.40.50.10320 6 239 8.8E-100 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 MC28_0768 3fd2fde4af271b029406f028d3207923 239 SUPERFAMILY SSF102588 9 231 6.02E-59 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 MC28_0768 3fd2fde4af271b029406f028d3207923 239 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 9 229 1.6E-98 T 14-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 MC28_0768 3fd2fde4af271b029406f028d3207923 239 Pfam PF02585 GlcNAc-PI de-N-acetylase 12 129 3.5E-23 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 MC28_4697 26ba05547305b784e62d0522106baca8 613 SUPERFAMILY SSF158472 211 259 2.09E-10 T 14-10-2018 MC28_4697 26ba05547305b784e62d0522106baca8 613 SUPERFAMILY SSF55785 257 374 2.62E-11 T 14-10-2018 IPR035965 PAS domain superfamily MC28_4697 26ba05547305b784e62d0522106baca8 613 Gene3D G3DSA:1.10.287.130 208 280 1.6E-11 T 14-10-2018 MC28_4697 26ba05547305b784e62d0522106baca8 613 SMART SM00304 210 262 2.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4697 26ba05547305b784e62d0522106baca8 613 SUPERFAMILY SSF55874 438 608 1.83E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4697 26ba05547305b784e62d0522106baca8 613 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 382 4.4E-6 T 14-10-2018 IPR000014 PAS domain MC28_4697 26ba05547305b784e62d0522106baca8 613 Gene3D G3DSA:3.30.450.20 281 373 5.4E-22 T 14-10-2018 MC28_4697 26ba05547305b784e62d0522106baca8 613 Gene3D G3DSA:1.10.287.130 374 453 2.7E-28 T 14-10-2018 MC28_4697 26ba05547305b784e62d0522106baca8 613 Pfam PF00512 His Kinase A (phospho-acceptor) domain 383 448 6.9E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4697 26ba05547305b784e62d0522106baca8 613 Pfam PF00989 PAS fold 271 319 6.6E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 MC28_4697 26ba05547305b784e62d0522106baca8 613 Gene3D G3DSA:3.30.565.10 455 612 2.3E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4697 26ba05547305b784e62d0522106baca8 613 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 584 1.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4697 26ba05547305b784e62d0522106baca8 613 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 545 1.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4697 26ba05547305b784e62d0522106baca8 613 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 603 1.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4697 26ba05547305b784e62d0522106baca8 613 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 559 1.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4697 26ba05547305b784e62d0522106baca8 613 Gene3D G3DSA:3.30.450.20 32 188 9.4E-43 T 14-10-2018 MC28_4697 26ba05547305b784e62d0522106baca8 613 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 605 2.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4697 26ba05547305b784e62d0522106baca8 613 SMART SM00388 382 449 6.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4697 26ba05547305b784e62d0522106baca8 613 SMART SM00091 269 335 6.2E-7 T 14-10-2018 IPR000014 PAS domain MC28_4697 26ba05547305b784e62d0522106baca8 613 SUPERFAMILY SSF47384 368 448 7.46E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_4697 26ba05547305b784e62d0522106baca8 613 SMART SM00387 494 606 1.9E-42 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4697 26ba05547305b784e62d0522106baca8 613 Pfam PF00672 HAMP domain 211 259 1.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 255 6.9E-64 T 14-10-2018 MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 258 2.3E-110 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.4E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.4E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.4E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.4E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.4E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.4E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 SUPERFAMILY SSF51735 4 257 1.73E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3322 8bfca12ae853ed6d84ef8821b0adace3 258 Gene3D G3DSA:3.40.50.720 1 258 4.1E-80 T 14-10-2018 MC28_3627 b0c30753447af60f8393f9da4c320ff0 368 SUPERFAMILY SSF52540 70 281 1.01E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3627 b0c30753447af60f8393f9da4c320ff0 368 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 368 8.5E-158 T 14-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH MC28_3627 b0c30753447af60f8393f9da4c320ff0 368 Pfam PF01926 50S ribosome-binding GTPase 163 237 1.1E-13 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3627 b0c30753447af60f8393f9da4c320ff0 368 Gene3D G3DSA:3.40.50.300 56 225 4.8E-53 T 14-10-2018 MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 SUPERFAMILY SSF50974 66 357 8.63E-81 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 Gene3D G3DSA:2.130.10.10 199 286 3.0E-29 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 Gene3D G3DSA:2.130.10.10 119 198 7.0E-23 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 Pfam PF10282 Lactonase, 7-bladed beta-propeller 66 132 5.9E-5 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 Pfam PF10282 Lactonase, 7-bladed beta-propeller 188 343 7.1E-12 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 276 317 3.0E-10 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 322 358 7.1E-12 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 68 107 7.7E-13 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 108 149 6.8E-14 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 156 191 1.0E-12 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 194 233 2.8E-10 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 234 275 3.6E-9 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 Gene3D G3DSA:2.130.10.10 53 118 1.8E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_E112 1c5dc2df71534b6616400a5e6eb97957 358 Gene3D G3DSA:2.130.10.10 287 358 3.9E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF08239 Bacterial SH3 domain 321 390 3.1E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 585 603 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 485 503 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 405 423 5.1E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 605 623 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 565 583 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 465 483 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 665 682 2.6E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 386 403 6.6E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 645 663 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 425 443 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 545 563 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 505 523 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 625 643 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 445 463 5.6E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01473 Putative cell wall binding repeat 525 543 2.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0199 818653d7c99df376ce1cd72b244f1809 688 SUPERFAMILY SSF69360 602 686 6.87E-27 T 14-10-2018 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 SMART SM00644 132 280 3.0E-25 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 SUPERFAMILY SSF69360 463 606 2.16E-59 T 14-10-2018 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Gene3D G3DSA:2.10.270.10 584 635 6.8E-21 T 14-10-2018 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Gene3D G3DSA:2.10.270.10 636 688 8.4E-19 T 14-10-2018 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Gene3D G3DSA:2.30.30.40 305 388 1.1E-8 T 14-10-2018 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 SUPERFAMILY SSF69360 350 505 1.31E-51 T 14-10-2018 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Gene3D G3DSA:2.20.120.10 389 425 5.0E-11 T 14-10-2018 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 141 264 4.5E-23 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 SMART SM00287 312 371 2.9E-4 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Gene3D G3DSA:2.10.270.10 426 478 1.3E-22 T 14-10-2018 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 SUPERFAMILY SSF55846 122 281 1.57E-43 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Gene3D G3DSA:2.10.270.10 479 583 4.3E-48 T 14-10-2018 MC28_0199 818653d7c99df376ce1cd72b244f1809 688 Gene3D G3DSA:3.40.80.10 121 279 7.3E-46 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_4555 fb472b49277d10a65ddcc1672c18169b 147 Gene3D G3DSA:3.40.1400.10 1 147 7.8E-58 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 MC28_4555 fb472b49277d10a65ddcc1672c18169b 147 SUPERFAMILY SSF89623 1 145 4.97E-57 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 MC28_4555 fb472b49277d10a65ddcc1672c18169b 147 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 1.1E-48 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 MC28_4555 fb472b49277d10a65ddcc1672c18169b 147 PIRSF PIRSF005384 1 147 1.9E-57 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 MC28_4555 fb472b49277d10a65ddcc1672c18169b 147 Pfam PF02502 Ribose/Galactose Isomerase 3 141 7.2E-54 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 MC28_4555 fb472b49277d10a65ddcc1672c18169b 147 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 1.2E-59 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 SUPERFAMILY SSF52374 123 503 5.9E-80 T 14-10-2018 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 Pfam PF07883 Cupin domain 40 105 6.3E-15 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_G192 338cd096b8ae90acc2fba045aed00374 671 SUPERFAMILY SSF51182 33 112 2.14E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_G192 338cd096b8ae90acc2fba045aed00374 671 Gene3D G3DSA:1.10.730.10 503 666 5.3E-10 T 14-10-2018 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 Gene3D G3DSA:3.40.50.620 126 502 2.0E-123 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_G192 338cd096b8ae90acc2fba045aed00374 671 Pfam PF09334 tRNA synthetases class I (M) 126 510 5.2E-96 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 144 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 Gene3D G3DSA:2.60.120.10 2 122 9.4E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_G192 338cd096b8ae90acc2fba045aed00374 671 Gene3D G3DSA:2.20.28.20 262 295 2.0E-123 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 SUPERFAMILY SSF47323 542 664 7.41E-9 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 PRINTS PR01041 Methionyl-tRNA synthetase signature 128 141 4.8E-8 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 PRINTS PR01041 Methionyl-tRNA synthetase signature 161 175 4.8E-8 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 PRINTS PR01041 Methionyl-tRNA synthetase signature 371 382 4.8E-8 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_G192 338cd096b8ae90acc2fba045aed00374 671 PRINTS PR01041 Methionyl-tRNA synthetase signature 411 426 4.8E-8 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_5116 3b7ca59350ede50835aaf063f388535f 64 SMART SM00530 4 59 2.9E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5116 3b7ca59350ede50835aaf063f388535f 64 Gene3D G3DSA:1.10.260.40 1 63 5.4E-26 T 14-10-2018 MC28_5116 3b7ca59350ede50835aaf063f388535f 64 Pfam PF01381 Helix-turn-helix 5 59 2.2E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5116 3b7ca59350ede50835aaf063f388535f 64 SUPERFAMILY SSF47413 2 62 6.17E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_G305 144542ddbd7d577d621edb53e0994f4b 193 Gene3D G3DSA:1.10.10.60 1 64 3.0E-29 T 14-10-2018 MC28_G305 144542ddbd7d577d621edb53e0994f4b 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MC28_G305 144542ddbd7d577d621edb53e0994f4b 193 SUPERFAMILY SSF46689 2 73 3.75E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_G305 144542ddbd7d577d621edb53e0994f4b 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 1.4E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_G305 144542ddbd7d577d621edb53e0994f4b 193 SUPERFAMILY SSF48498 79 192 1.44E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_G305 144542ddbd7d577d621edb53e0994f4b 193 Gene3D G3DSA:1.10.357.10 65 193 5.9E-19 T 14-10-2018 MC28_G305 144542ddbd7d577d621edb53e0994f4b 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_G305 144542ddbd7d577d621edb53e0994f4b 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Gene3D G3DSA:2.10.270.10 202 275 3.5E-23 T 14-10-2018 MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Gene3D G3DSA:2.10.270.10 330 392 2.1E-21 T 14-10-2018 MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 107 123 0.11 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 354 371 2.0E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 187 199 0.2 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 293 307 0.0032 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 206 224 6.9E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 226 244 2.8E-8 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 255 271 0.26 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 315 327 0.23 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 333 351 5.3E-8 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 378 391 0.18 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 42 58 0.12 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 62 80 6.2E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Pfam PF01473 Putative cell wall binding repeat 168 182 0.74 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 SUPERFAMILY SSF69360 141 275 2.59E-32 T 14-10-2018 MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Gene3D G3DSA:2.10.270.10 94 156 4.1E-11 T 14-10-2018 MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Gene3D G3DSA:2.10.270.10 157 201 3.3E-10 T 14-10-2018 MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Gene3D G3DSA:2.10.270.10 18 93 4.6E-13 T 14-10-2018 MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 Gene3D G3DSA:2.10.270.10 276 329 1.7E-15 T 14-10-2018 MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 SUPERFAMILY SSF69360 25 159 5.49E-23 T 14-10-2018 MC28_0319 ebd30c92f65e52f51aa382b0a0e209eb 392 SUPERFAMILY SSF69360 255 391 1.96E-43 T 14-10-2018 MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 740 776 0.0017 T 14-10-2018 MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 Gene3D G3DSA:2.60.40.10 577 691 1.3E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 TIGRFAM TIGR03934 TQXA_dom: TQXA domain 109 148 1.4E-8 T 14-10-2018 IPR023849 Uncharacterised domain CHP03934, TQXA MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 SUPERFAMILY SSF49478 583 643 1.26E-6 T 14-10-2018 MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 SUPERFAMILY SSF49478 497 558 2.04E-6 T 14-10-2018 MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 SUPERFAMILY SSF49478 310 377 2.98E-9 T 14-10-2018 MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 SUPERFAMILY SSF49478 403 463 1.26E-8 T 14-10-2018 MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 Gene3D G3DSA:2.60.40.10 393 481 1.0E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 Gene3D G3DSA:2.60.40.10 300 392 1.4E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_E018 4627111d6a84ddf2d0154e7a0d98ac63 779 Gene3D G3DSA:2.60.40.10 482 572 5.7E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4716 de805e63781d6584e5304db71db04a33 458 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 123 1.6E-39 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 MC28_4716 de805e63781d6584e5304db71db04a33 458 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 458 3.9E-131 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 MC28_4716 de805e63781d6584e5304db71db04a33 458 SUPERFAMILY SSF52540 77 376 1.49E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4716 de805e63781d6584e5304db71db04a33 458 Gene3D G3DSA:3.30.1360.120 1 123 9.1E-46 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MC28_4716 de805e63781d6584e5304db71db04a33 458 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 223 372 2.2E-27 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_4716 de805e63781d6584e5304db71db04a33 458 Pfam PF12631 MnmE helical domain 126 455 2.5E-60 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 MC28_4716 de805e63781d6584e5304db71db04a33 458 Pfam PF01926 50S ribosome-binding GTPase 224 335 1.2E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_4716 de805e63781d6584e5304db71db04a33 458 Gene3D G3DSA:1.20.120.430 124 458 1.2E-107 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 MC28_4716 de805e63781d6584e5304db71db04a33 458 SUPERFAMILY SSF116878 124 458 6.8E-51 T 14-10-2018 MC28_4716 de805e63781d6584e5304db71db04a33 458 Gene3D G3DSA:3.40.50.300 221 386 1.2E-107 T 14-10-2018 MC28_4716 de805e63781d6584e5304db71db04a33 458 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 458 34.174 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 Pfam PF00406 Adenylate kinase 5 189 2.6E-60 T 14-10-2018 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 209 1.8E-78 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 PRINTS PR00094 Adenylate kinase signature 177 191 4.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 PRINTS PR00094 Adenylate kinase signature 4 17 4.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 PRINTS PR00094 Adenylate kinase signature 81 97 4.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 PRINTS PR00094 Adenylate kinase signature 160 175 4.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 PRINTS PR00094 Adenylate kinase signature 32 46 4.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 SUPERFAMILY SSF52540 1 212 6.71E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 Pfam PF05191 Adenylate kinase, active site lid 127 162 9.1E-18 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 Hamap MF_00235 Adenylate kinase [adk]. 1 213 54.036 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 MC28_4843 819c2df8fbfcee1bd5cd8909ff8b8229 216 Gene3D G3DSA:3.40.50.300 1 212 7.4E-81 T 14-10-2018 MC28_1632 a60b71d7fca26770a61d56bd6c451dc1 186 Pfam PF01381 Helix-turn-helix 13 61 7.3E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1632 a60b71d7fca26770a61d56bd6c451dc1 186 Gene3D G3DSA:1.10.260.40 2 71 7.8E-18 T 14-10-2018 MC28_1632 a60b71d7fca26770a61d56bd6c451dc1 186 SUPERFAMILY SSF51182 57 184 1.83E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_1632 a60b71d7fca26770a61d56bd6c451dc1 186 Gene3D G3DSA:2.60.120.10 72 180 9.6E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_1632 a60b71d7fca26770a61d56bd6c451dc1 186 SUPERFAMILY SSF47413 4 69 1.56E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_1632 a60b71d7fca26770a61d56bd6c451dc1 186 SMART SM00530 9 64 9.3E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1632 a60b71d7fca26770a61d56bd6c451dc1 186 Pfam PF07883 Cupin domain 110 180 4.3E-16 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_F276 292ceb90d5de82abce0034009cf1e2f2 190 Pfam PF00589 Phage integrase family 30 177 1.3E-21 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_F276 292ceb90d5de82abce0034009cf1e2f2 190 SUPERFAMILY SSF56349 17 185 2.12E-32 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_F276 292ceb90d5de82abce0034009cf1e2f2 190 Gene3D G3DSA:1.10.443.10 10 189 6.8E-29 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_1279 db2b890f1f58c32293996f5022bad9aa 165 SUPERFAMILY SSF55729 2 164 4.82E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1279 db2b890f1f58c32293996f5022bad9aa 165 Gene3D G3DSA:3.40.630.30 1 165 1.1E-40 T 14-10-2018 MC28_1279 db2b890f1f58c32293996f5022bad9aa 165 Pfam PF13673 Acetyltransferase (GNAT) domain 40 144 9.0E-16 T 14-10-2018 IPR000182 GNAT domain MC28_2781 493c935d5554b169478f0e2110d1e3df 70 Pfam PF05532 CsbD-like 10 61 1.1E-17 T 14-10-2018 IPR008462 CsbD-like domain MC28_2781 493c935d5554b169478f0e2110d1e3df 70 Gene3D G3DSA:1.10.1470.10 9 69 4.1E-9 T 14-10-2018 IPR036629 YjbJ superfamily MC28_2781 493c935d5554b169478f0e2110d1e3df 70 SUPERFAMILY SSF69047 9 63 1.57E-12 T 14-10-2018 IPR036629 YjbJ superfamily MC28_F083 901192cdd58eaaee3c778d1a1cd43f0b 525 SUPERFAMILY SSF53041 13 159 8.76E-22 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_F083 901192cdd58eaaee3c778d1a1cd43f0b 525 Pfam PF00239 Resolvase, N terminal domain 16 158 3.2E-21 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_F083 901192cdd58eaaee3c778d1a1cd43f0b 525 Pfam PF07508 Recombinase 181 281 5.4E-17 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 MC28_F083 901192cdd58eaaee3c778d1a1cd43f0b 525 SMART SM00857 14 159 8.1E-26 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_F083 901192cdd58eaaee3c778d1a1cd43f0b 525 Gene3D G3DSA:3.40.50.1390 9 118 2.2E-20 T 14-10-2018 MC28_F083 901192cdd58eaaee3c778d1a1cd43f0b 525 Gene3D G3DSA:1.10.10.2600 144 284 2.8E-15 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily MC28_F083 901192cdd58eaaee3c778d1a1cd43f0b 525 ProSitePatterns PS00397 Site-specific recombinases active site. 17 25 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_4329 eb2081a8f0d8af40d006107314338ff3 114 Pfam PF01638 HxlR-like helix-turn-helix 14 102 1.6E-38 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type MC28_4329 eb2081a8f0d8af40d006107314338ff3 114 Gene3D G3DSA:1.10.10.10 1 114 2.3E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4329 eb2081a8f0d8af40d006107314338ff3 114 SUPERFAMILY SSF46785 2 105 1.57E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4946 69dc172446f2c2c8b08d9c3e7ef96a31 157 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 132 3.6E-38 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 MC28_4946 69dc172446f2c2c8b08d9c3e7ef96a31 157 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 135 2.4E-40 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 MC28_4946 69dc172446f2c2c8b08d9c3e7ef96a31 157 SUPERFAMILY SSF52540 26 120 3.21E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4946 69dc172446f2c2c8b08d9c3e7ef96a31 157 Gene3D G3DSA:3.40.50.300 2 149 1.6E-41 T 14-10-2018 MC28_3201 a384d4013f6adfd0d2a5eecc032faaa6 64 Pfam PF01381 Helix-turn-helix 7 62 8.3E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3201 a384d4013f6adfd0d2a5eecc032faaa6 64 SMART SM00530 6 62 1.1E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3201 a384d4013f6adfd0d2a5eecc032faaa6 64 SUPERFAMILY SSF47413 4 63 4.5E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3201 a384d4013f6adfd0d2a5eecc032faaa6 64 Gene3D G3DSA:1.10.260.40 4 64 2.2E-11 T 14-10-2018 MC28_5013 5ae96082a73d04454534fa5f20b12122 511 PIRSF PIRSF000414 1 511 2.2E-217 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5013 5ae96082a73d04454534fa5f20b12122 511 Gene3D G3DSA:3.40.140.20 378 511 1.9E-57 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5013 5ae96082a73d04454534fa5f20b12122 511 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 511 6.7E-245 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5013 5ae96082a73d04454534fa5f20b12122 511 SUPERFAMILY SSF53927 206 511 2.91E-130 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 MC28_5013 5ae96082a73d04454534fa5f20b12122 511 Pfam PF02142 MGS-like domain 14 129 8.8E-27 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain MC28_5013 5ae96082a73d04454534fa5f20b12122 511 SUPERFAMILY SSF52335 2 194 5.23E-70 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily MC28_5013 5ae96082a73d04454534fa5f20b12122 511 SMART SM00851 14 129 1.0E-56 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain MC28_5013 5ae96082a73d04454534fa5f20b12122 511 Gene3D G3DSA:3.40.140.20 203 360 1.2E-61 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5013 5ae96082a73d04454534fa5f20b12122 511 Gene3D G3DSA:3.40.50.1380 1 198 9.5E-88 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily MC28_5013 5ae96082a73d04454534fa5f20b12122 511 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 444 4.0E-124 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5013 5ae96082a73d04454534fa5f20b12122 511 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 511 45.907 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5013 5ae96082a73d04454534fa5f20b12122 511 SMART SM00798 134 446 7.0E-201 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 SUPERFAMILY SSF54719 90 201 1.7E-47 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 98 198 6.1E-42 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 SUPERFAMILY SSF46609 2 92 4.45E-38 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 Gene3D G3DSA:2.40.500.20 92 203 5.7E-51 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 91 5.6E-33 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 1.2E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 1.2E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 PRINTS PR01703 Manganese superoxide dismutase signature 127 135 1.2E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 1.2E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 PRINTS PR01703 Manganese superoxide dismutase signature 74 87 1.2E-27 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 Gene3D G3DSA:1.10.287.990 21 91 2.4E-32 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_3567 22a054e16c44615fbab98b5100c816fe 203 PIRSF PIRSF000349 1 203 1.3E-85 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 SMART SM00388 191 258 5.0E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 SMART SM00387 303 414 7.0E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 SUPERFAMILY SSF47384 184 259 1.24E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 354 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 368 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 413 1.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 Gene3D G3DSA:1.10.287.130 179 260 4.4E-18 T 14-10-2018 MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 SUPERFAMILY SSF55874 248 412 5.76E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 Pfam PF00512 His Kinase A (phospho-acceptor) domain 192 257 4.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5295 bbd431255e1248ac984b65c1c0aca66d 416 Gene3D G3DSA:3.30.565.10 262 415 5.1E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2056 0b2c7740876a0ae9c239d727e654b18f 186 Pfam PF00583 Acetyltransferase (GNAT) family 67 160 3.7E-17 T 14-10-2018 IPR000182 GNAT domain MC28_2056 0b2c7740876a0ae9c239d727e654b18f 186 Gene3D G3DSA:3.40.630.30 18 186 5.3E-37 T 14-10-2018 MC28_2056 0b2c7740876a0ae9c239d727e654b18f 186 SUPERFAMILY SSF55729 17 184 6.42E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_B27 f444884ab66516f3d87d888ab261d37e 378 Gene3D G3DSA:1.25.40.10 14 378 2.8E-92 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_B27 f444884ab66516f3d87d888ab261d37e 378 SUPERFAMILY SSF48452 142 285 1.01E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_5368 10eafb545689969a2bcfe6e39c3963c2 276 Gene3D G3DSA:3.40.190.10 138 235 5.0E-83 T 14-10-2018 MC28_5368 10eafb545689969a2bcfe6e39c3963c2 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 272 4.8E-59 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_5368 10eafb545689969a2bcfe6e39c3963c2 276 Gene3D G3DSA:3.40.190.10 51 269 5.0E-83 T 14-10-2018 MC28_5368 10eafb545689969a2bcfe6e39c3963c2 276 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 74 87 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site MC28_5368 10eafb545689969a2bcfe6e39c3963c2 276 SMART SM00079 50 272 4.4E-6 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 MC28_5368 10eafb545689969a2bcfe6e39c3963c2 276 SUPERFAMILY SSF53850 4 273 5.83E-70 T 14-10-2018 MC28_5368 10eafb545689969a2bcfe6e39c3963c2 276 SMART SM00062 50 273 4.3E-83 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 Gene3D G3DSA:2.40.50.140 551 660 1.6E-36 T 14-10-2018 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 523 8.6E-179 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 SUPERFAMILY SSF52374 5 360 5.9E-118 T 14-10-2018 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 Gene3D G3DSA:1.10.730.10 351 528 1.7E-49 T 14-10-2018 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 522 51.074 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 Gene3D G3DSA:3.40.50.620 8 344 3.3E-153 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 8.5E-34 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 361 372 8.5E-34 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 8.5E-34 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 8.5E-34 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 269 284 8.5E-34 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 236 247 8.5E-34 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 SUPERFAMILY SSF50249 554 659 2.15E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 Pfam PF01588 Putative tRNA binding domain 566 658 9.3E-28 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 Pfam PF09334 tRNA synthetases class I (M) 8 373 4.0E-120 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 Pfam PF08264 Anticodon-binding domain of tRNA 397 499 4.5E-8 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 530 660 5.1E-48 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 Gene3D G3DSA:2.170.220.10 119 238 3.3E-153 T 14-10-2018 MC28_4753 68a0bbfe2213de310ce12b5b9023a7c0 660 SUPERFAMILY SSF47323 363 573 5.4E-47 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_5139 a82c1c7546b0b8dbe74940139a9263cc 920 SUPERFAMILY SSF48452 41 168 8.01E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_5139 a82c1c7546b0b8dbe74940139a9263cc 920 Gene3D G3DSA:1.25.40.10 28 182 1.5E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_5139 a82c1c7546b0b8dbe74940139a9263cc 920 Gene3D G3DSA:3.40.50.300 382 597 6.2E-7 T 14-10-2018 MC28_G083 40c6b54c720db2577452c7d7a45489ff 388 SUPERFAMILY SSF103473 4 374 6.8E-57 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_G083 40c6b54c720db2577452c7d7a45489ff 388 Pfam PF07690 Major Facilitator Superfamily 7 339 4.8E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_G083 40c6b54c720db2577452c7d7a45489ff 388 Gene3D G3DSA:1.20.1250.20 1 369 4.1E-48 T 14-10-2018 MC28_E173 36faef7d1bd4c6e41a9a0be4d2ded373 837 Pfam PF06114 IrrE N-terminal-like domain 185 259 1.3E-8 T 14-10-2018 IPR010359 IrrE N-terminal-like domain MC28_5369 2c5354562dd96af8d62ca09556efde81 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 2.1E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_5369 2c5354562dd96af8d62ca09556efde81 218 Gene3D G3DSA:1.10.3720.10 2 217 8.6E-56 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5369 2c5354562dd96af8d62ca09556efde81 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 1.0E-26 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 MC28_5369 2c5354562dd96af8d62ca09556efde81 218 SUPERFAMILY SSF161098 13 199 3.27E-45 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3263 bbd45f3726117780d3fb39e319e46505 184 Pfam PF01327 Polypeptide deformylase 5 171 3.0E-45 T 14-10-2018 IPR023635 Peptide deformylase MC28_3263 bbd45f3726117780d3fb39e319e46505 184 PRINTS PR01576 Peptide deformylase signature 121 139 2.3E-32 T 14-10-2018 IPR023635 Peptide deformylase MC28_3263 bbd45f3726117780d3fb39e319e46505 184 PRINTS PR01576 Peptide deformylase signature 140 169 2.3E-32 T 14-10-2018 IPR023635 Peptide deformylase MC28_3263 bbd45f3726117780d3fb39e319e46505 184 PRINTS PR01576 Peptide deformylase signature 47 76 2.3E-32 T 14-10-2018 IPR023635 Peptide deformylase MC28_3263 bbd45f3726117780d3fb39e319e46505 184 PRINTS PR01576 Peptide deformylase signature 108 119 2.3E-32 T 14-10-2018 IPR023635 Peptide deformylase MC28_3263 bbd45f3726117780d3fb39e319e46505 184 PIRSF PIRSF004749 2 184 8.5E-48 T 14-10-2018 IPR023635 Peptide deformylase MC28_3263 bbd45f3726117780d3fb39e319e46505 184 Gene3D G3DSA:3.90.45.10 1 184 1.9E-70 T 14-10-2018 IPR036821 Peptide deformylase superfamily MC28_3263 bbd45f3726117780d3fb39e319e46505 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 177 1.3E-50 T 14-10-2018 IPR023635 Peptide deformylase MC28_3263 bbd45f3726117780d3fb39e319e46505 184 Hamap MF_00163 Peptide deformylase [def]. 3 182 27.851 T 14-10-2018 IPR023635 Peptide deformylase MC28_3263 bbd45f3726117780d3fb39e319e46505 184 SUPERFAMILY SSF56420 2 178 1.03E-60 T 14-10-2018 IPR036821 Peptide deformylase superfamily MC28_4393 bc8e3ee0414a768c8eed89bd0e492cd1 515 SUPERFAMILY SSF48452 164 331 1.04E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_4393 bc8e3ee0414a768c8eed89bd0e492cd1 515 Gene3D G3DSA:1.25.40.10 16 144 1.4E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_4393 bc8e3ee0414a768c8eed89bd0e492cd1 515 SUPERFAMILY SSF48452 34 130 2.22E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_4393 bc8e3ee0414a768c8eed89bd0e492cd1 515 SMART SM00028 33 66 34.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_4393 bc8e3ee0414a768c8eed89bd0e492cd1 515 SMART SM00028 100 133 88.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_4393 bc8e3ee0414a768c8eed89bd0e492cd1 515 SMART SM00028 196 229 0.0048 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_4393 bc8e3ee0414a768c8eed89bd0e492cd1 515 Pfam PF13432 Tetratricopeptide repeat 168 229 3.9E-7 T 14-10-2018 MC28_4393 bc8e3ee0414a768c8eed89bd0e492cd1 515 Gene3D G3DSA:1.25.40.10 163 375 6.6E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.2E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 Pfam PF09269 Domain of unknown function (DUF1967) 358 426 6.2E-25 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 Pfam PF01018 GTP1/OBG 3 157 1.2E-59 T 14-10-2018 IPR006169 GTP1/OBG domain MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 SUPERFAMILY SSF82051 1 157 2.22E-54 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 Gene3D G3DSA:2.70.210.12 1 157 9.5E-60 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 Gene3D G3DSA:3.40.50.300 158 340 2.9E-61 T 14-10-2018 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 2.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 2.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 PIRSF PIRSF002401 1 375 3.4E-142 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 358 426 2.2E-26 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 Gene3D G3DSA:2.40.240.60 357 428 3.1E-18 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 320 6.1E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 SUPERFAMILY SSF52540 160 332 7.19E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 1.7E-142 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 SUPERFAMILY SSF102741 357 428 1.83E-23 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily MC28_3732 b34bf6244b592c5d451fe41bb34c0124 428 Hamap MF_01454 GTPase Obg [obg]. 1 329 47.842 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 MC28_1847 1872662b1be8debc84db9f45907a12e7 433 SUPERFAMILY SSF47384 214 283 1.96E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_1847 1872662b1be8debc84db9f45907a12e7 433 Pfam PF07694 5TMR of 5TMR-LYT 38 195 5.4E-24 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 MC28_1847 1872662b1be8debc84db9f45907a12e7 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 430 2.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1847 1872662b1be8debc84db9f45907a12e7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1847 1872662b1be8debc84db9f45907a12e7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1847 1872662b1be8debc84db9f45907a12e7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1847 1872662b1be8debc84db9f45907a12e7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1847 1872662b1be8debc84db9f45907a12e7 433 Gene3D G3DSA:3.30.565.10 283 428 9.4E-60 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1847 1872662b1be8debc84db9f45907a12e7 433 SMART SM00387 325 431 2.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1847 1872662b1be8debc84db9f45907a12e7 433 SMART SM00388 219 285 1.3E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1847 1872662b1be8debc84db9f45907a12e7 433 SUPERFAMILY SSF55874 274 429 1.07E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1847 1872662b1be8debc84db9f45907a12e7 433 Gene3D G3DSA:1.10.287.130 223 282 9.4E-60 T 14-10-2018 MC28_1847 1872662b1be8debc84db9f45907a12e7 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 221 281 6.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2108 ba0eb07a87bdfec6bdfad487d6a42b68 170 Pfam PF04167 Protein of unknown function (DUF402) 64 129 1.9E-13 T 14-10-2018 IPR007295 Domain of unknown function DUF402 MC28_2108 ba0eb07a87bdfec6bdfad487d6a42b68 170 SUPERFAMILY SSF159234 23 148 6.41E-28 T 14-10-2018 IPR035930 FomD-like superfamily MC28_2108 ba0eb07a87bdfec6bdfad487d6a42b68 170 Gene3D G3DSA:2.40.380.10 30 168 1.3E-7 T 14-10-2018 IPR035930 FomD-like superfamily MC28_0378 3891ad1c09d80b0eaf897710e57159d2 284 Gene3D G3DSA:2.40.50.140 73 149 7.8E-23 T 14-10-2018 MC28_0378 3891ad1c09d80b0eaf897710e57159d2 284 Gene3D G3DSA:2.40.50.140 153 219 9.3E-17 T 14-10-2018 MC28_0378 3891ad1c09d80b0eaf897710e57159d2 284 Gene3D G3DSA:1.10.10.10 221 282 2.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0378 3891ad1c09d80b0eaf897710e57159d2 284 PIRSF PIRSF012524 1 284 3.6E-105 T 14-10-2018 IPR014464 Conserved virulence factor B MC28_0378 3891ad1c09d80b0eaf897710e57159d2 284 SUPERFAMILY SSF50249 154 213 4.83E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_0378 3891ad1c09d80b0eaf897710e57159d2 284 SMART SM00316 69 136 34.0 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_0378 3891ad1c09d80b0eaf897710e57159d2 284 SMART SM00316 4 64 3.1 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_0378 3891ad1c09d80b0eaf897710e57159d2 284 SMART SM00316 151 213 4.5 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_0378 3891ad1c09d80b0eaf897710e57159d2 284 Pfam PF13509 S1 domain 5 64 1.9E-20 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain MC28_1583 28b1531ebe99c52213082e3da2c4cd21 90 Gene3D G3DSA:4.10.520.10 1 90 4.9E-40 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_1583 28b1531ebe99c52213082e3da2c4cd21 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_1583 28b1531ebe99c52213082e3da2c4cd21 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_1583 28b1531ebe99c52213082e3da2c4cd21 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_1583 28b1531ebe99c52213082e3da2c4cd21 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.8E-36 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_1583 28b1531ebe99c52213082e3da2c4cd21 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MC28_1583 28b1531ebe99c52213082e3da2c4cd21 90 SUPERFAMILY SSF47729 1 90 1.15E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_1583 28b1531ebe99c52213082e3da2c4cd21 90 SMART SM00411 1 90 4.5E-49 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_4157 d8318718e566a5079a58c3b47286d659 645 SMART SM00642 152 504 1.5E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_4157 d8318718e566a5079a58c3b47286d659 645 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 1 619 40.648 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 MC28_4157 d8318718e566a5079a58c3b47286d659 645 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 15 617 2.4E-259 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 MC28_4157 d8318718e566a5079a58c3b47286d659 645 SUPERFAMILY SSF51445 81 508 2.02E-107 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_4157 d8318718e566a5079a58c3b47286d659 645 Gene3D G3DSA:2.60.40.1180 515 619 3.6E-36 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_4157 d8318718e566a5079a58c3b47286d659 645 Gene3D G3DSA:2.60.40.10 3 122 6.4E-41 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4157 d8318718e566a5079a58c3b47286d659 645 Pfam PF00128 Alpha amylase, catalytic domain 175 276 1.7E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_4157 d8318718e566a5079a58c3b47286d659 645 SUPERFAMILY SSF51011 515 619 9.46E-32 T 14-10-2018 MC28_4157 d8318718e566a5079a58c3b47286d659 645 PIRSF PIRSF000463 3 629 8.1E-260 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 MC28_4157 d8318718e566a5079a58c3b47286d659 645 Gene3D G3DSA:3.20.20.80 125 514 6.1E-148 T 14-10-2018 MC28_4157 d8318718e566a5079a58c3b47286d659 645 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 520 618 2.9E-21 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 MC28_4157 d8318718e566a5079a58c3b47286d659 645 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 26 108 1.6E-20 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 MC28_G262 d3f46d622fc7aaa71e46f01455ae30c7 846 Pfam PF12846 AAA-like domain 447 808 1.5E-104 T 14-10-2018 MC28_G262 d3f46d622fc7aaa71e46f01455ae30c7 846 SUPERFAMILY SSF52540 412 791 2.28E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G262 d3f46d622fc7aaa71e46f01455ae30c7 846 PIRSF PIRSF015040 2 823 5.4E-161 T 14-10-2018 IPR016628 ATPase, SAG2001, predicted MC28_F152 0a9b20d1d24db32982f044f667fd030d 458 Pfam PF02687 FtsX-like permease family 331 450 2.2E-14 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 Gene3D G3DSA:3.90.190.20 315 448 2.0E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 SUPERFAMILY SSF51984 10 100 6.02E-18 T 14-10-2018 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 SUPERFAMILY SSF53244 310 449 4.58E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 SUPERFAMILY SSF53623 103 308 1.98E-50 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 449 35.987 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 Gene3D G3DSA:3.40.50.720 10 95 1.2E-28 T 14-10-2018 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 Pfam PF08245 Mur ligase middle domain 117 290 3.2E-33 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 376 3.3E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 447 1.0E-137 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_3134 912a629e00ca6ac04c6fda5f45765ec1 450 Gene3D G3DSA:3.40.1190.10 102 308 1.3E-64 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_0352 ebbca6b9885bd8a775f826d620bc2984 67 SMART SM00357 4 67 1.1E-27 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 MC28_0352 ebbca6b9885bd8a775f826d620bc2984 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.8E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_0352 ebbca6b9885bd8a775f826d620bc2984 67 SUPERFAMILY SSF50249 3 66 5.14E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_0352 ebbca6b9885bd8a775f826d620bc2984 67 PIRSF PIRSF002599 1 67 3.9E-25 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 MC28_0352 ebbca6b9885bd8a775f826d620bc2984 67 PRINTS PR00050 Cold shock protein signature 5 20 1.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_0352 ebbca6b9885bd8a775f826d620bc2984 67 PRINTS PR00050 Cold shock protein signature 40 58 1.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_0352 ebbca6b9885bd8a775f826d620bc2984 67 PRINTS PR00050 Cold shock protein signature 25 34 1.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_0352 ebbca6b9885bd8a775f826d620bc2984 67 Gene3D G3DSA:2.40.50.140 2 65 1.3E-28 T 14-10-2018 MC28_0352 ebbca6b9885bd8a775f826d620bc2984 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 34 - T 14-10-2018 IPR019844 Cold-shock conserved site MC28_1410 e8267a8561796d32679b5f1e4e99833b 485 Gene3D G3DSA:3.40.710.10 2 349 4.9E-91 T 14-10-2018 MC28_1410 e8267a8561796d32679b5f1e4e99833b 485 SUPERFAMILY SSF56601 9 352 2.71E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1410 e8267a8561796d32679b5f1e4e99833b 485 Pfam PF00144 Beta-lactamase 13 337 8.1E-61 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_1410 e8267a8561796d32679b5f1e4e99833b 485 Pfam PF11954 Domain of unknown function (DUF3471) 385 476 4.8E-19 T 14-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal MC28_1410 e8267a8561796d32679b5f1e4e99833b 485 Gene3D G3DSA:2.40.128.600 381 464 1.9E-7 T 14-10-2018 MC28_1050 8314095e83f78cad99afbd2e2f51bfa2 176 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 3.3E-34 T 14-10-2018 IPR000182 GNAT domain MC28_1050 8314095e83f78cad99afbd2e2f51bfa2 176 SUPERFAMILY SSF55729 1 174 2.42E-51 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1050 8314095e83f78cad99afbd2e2f51bfa2 176 Gene3D G3DSA:3.40.630.30 4 170 4.2E-49 T 14-10-2018 MC28_0939 dfff21fd74c75b1668cf53b5aeeb442f 220 SMART SM00835 37 175 4.5E-34 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 MC28_0939 dfff21fd74c75b1668cf53b5aeeb442f 220 SUPERFAMILY SSF51182 33 190 1.88E-29 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_0939 dfff21fd74c75b1668cf53b5aeeb442f 220 Gene3D G3DSA:2.60.120.10 22 190 2.5E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_0939 dfff21fd74c75b1668cf53b5aeeb442f 220 Pfam PF00190 Cupin 48 173 5.8E-17 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 SUPERFAMILY SSF53822 58 287 1.43E-35 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 SMART SM00354 1 71 1.6E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 Gene3D G3DSA:1.10.260.40 3 58 3.3E-23 T 14-10-2018 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 Gene3D G3DSA:3.40.50.2300 142 267 1.3E-38 T 14-10-2018 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 Pfam PF13377 Periplasmic binding protein-like domain 155 283 1.7E-10 T 14-10-2018 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 Gene3D G3DSA:3.40.50.2300 62 281 1.3E-38 T 14-10-2018 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 SUPERFAMILY SSF47413 2 59 2.25E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.8E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.8E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3397 191b89c8ac9d06418a77002297ec74d4 287 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3944 4dc2a7de5e3c497ed452205284618299 214 SUPERFAMILY SSF54631 1 127 4.67E-31 T 14-10-2018 MC28_3944 4dc2a7de5e3c497ed452205284618299 214 Gene3D G3DSA:3.10.580.10 1 132 7.2E-34 T 14-10-2018 MC28_3944 4dc2a7de5e3c497ed452205284618299 214 SUPERFAMILY SSF55021 137 206 5.6E-11 T 14-10-2018 MC28_3944 4dc2a7de5e3c497ed452205284618299 214 Pfam PF01842 ACT domain 139 199 2.5E-10 T 14-10-2018 IPR002912 ACT domain MC28_3944 4dc2a7de5e3c497ed452205284618299 214 Pfam PF00571 CBS domain 77 128 4.0E-9 T 14-10-2018 IPR000644 CBS domain MC28_3944 4dc2a7de5e3c497ed452205284618299 214 Pfam PF00571 CBS domain 3 56 2.7E-16 T 14-10-2018 IPR000644 CBS domain MC28_3944 4dc2a7de5e3c497ed452205284618299 214 Gene3D G3DSA:3.30.70.260 133 204 4.9E-7 T 14-10-2018 MC28_3944 4dc2a7de5e3c497ed452205284618299 214 SMART SM00116 81 128 3.2E-9 T 14-10-2018 IPR000644 CBS domain MC28_3944 4dc2a7de5e3c497ed452205284618299 214 SMART SM00116 10 58 1.7E-12 T 14-10-2018 IPR000644 CBS domain MC28_3944 4dc2a7de5e3c497ed452205284618299 214 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 140 205 0.006 T 14-10-2018 MC28_F039 da4dc8f85ea1e43d30872f19661232f8 395 Gene3D G3DSA:3.30.420.40 226 357 9.3E-12 T 14-10-2018 MC28_F039 da4dc8f85ea1e43d30872f19661232f8 395 SUPERFAMILY SSF53067 227 354 9.71E-8 T 14-10-2018 MC28_2725 b764240ce75f32198d2567a4c8bb609f 365 Gene3D G3DSA:1.20.1740.10 3 364 3.2E-8 T 14-10-2018 MC28_2725 b764240ce75f32198d2567a4c8bb609f 365 Pfam PF03845 Spore germination protein 9 322 2.8E-58 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_2725 b764240ce75f32198d2567a4c8bb609f 365 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 8 362 3.7E-107 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 SUPERFAMILY SSF52954 529 638 1.37E-31 T 14-10-2018 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Pfam PF02824 TGS domain 7 65 1.3E-10 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Gene3D G3DSA:3.30.54.20 134 190 1.3E-63 T 14-10-2018 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 634 8.9E-235 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 SUPERFAMILY SSF55186 67 244 2.49E-64 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 530 5.5E-42 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 SUPERFAMILY SSF55681 246 528 2.67E-98 T 14-10-2018 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 365 388 4.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 4.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 4.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 4.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 332 360 4.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Gene3D G3DSA:3.30.980.10 73 225 1.3E-63 T 14-10-2018 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Gene3D G3DSA:3.30.930.10 226 533 2.9E-135 T 14-10-2018 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 SUPERFAMILY SSF81271 6 65 5.45E-14 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 637 35.271 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Pfam PF03129 Anticodon binding domain 543 633 1.6E-20 T 14-10-2018 IPR004154 Anticodon-binding MC28_1591 21984049d4d262f2820a6c884c3e340f 640 SMART SM00863 173 222 6.9E-24 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Gene3D G3DSA:3.40.50.800 534 640 6.7E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Gene3D G3DSA:3.10.20.30 3 66 3.5E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_1591 21984049d4d262f2820a6c884c3e340f 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 222 7.9E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 MC28_2016 453bee0ac49c3140cc1380252944c5a8 213 Pfam PF01966 HD domain 26 148 3.3E-7 T 14-10-2018 IPR006674 HD domain MC28_2016 453bee0ac49c3140cc1380252944c5a8 213 SUPERFAMILY SSF109604 9 149 6.51E-15 T 14-10-2018 MC28_2016 453bee0ac49c3140cc1380252944c5a8 213 Gene3D G3DSA:1.10.3210.10 7 191 2.9E-9 T 14-10-2018 MC28_2016 453bee0ac49c3140cc1380252944c5a8 213 SMART SM00471 21 160 1.0E-5 T 14-10-2018 IPR003607 HD/PDEase domain MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 SMART SM01274 18 151 8.0E-81 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 SUPERFAMILY SSF51735 163 393 2.07E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 Gene3D G3DSA:3.40.50.720 161 399 2.0E-81 T 14-10-2018 MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 SMART SM00919 163 386 3.6E-123 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 1.3E-28 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 Gene3D G3DSA:3.40.50.10380 1 160 1.0E-73 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 PIRSF PIRSF000106 19 399 2.3E-80 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 SUPERFAMILY SSF53223 10 161 1.58E-55 T 14-10-2018 MC28_5302 8e850cc8bde428597d770d6c5a2d3d45 400 Pfam PF03949 Malic enzyme, NAD binding domain 165 385 1.0E-24 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 Gene3D G3DSA:3.30.420.340 365 523 4.5E-62 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 SMART SM00465 15 95 8.3E-21 T 14-10-2018 IPR000305 GIY-YIG endonuclease MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 5 570 1.9E-212 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 SUPERFAMILY SSF47781 502 591 6.04E-21 T 14-10-2018 IPR010994 RuvA domain 2-like MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 28.364 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 SUPERFAMILY SSF82771 14 97 2.62E-22 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 SUPERFAMILY SSF46600 182 235 6.8E-14 T 14-10-2018 IPR036876 UVR domain superfamily MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 Pfam PF02151 UvrB/uvrC motif 198 229 1.1E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 Gene3D G3DSA:3.40.1440.10 1 99 3.1E-37 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 Pfam PF01541 GIY-YIG catalytic domain 16 90 5.7E-10 T 14-10-2018 IPR000305 GIY-YIG endonuclease MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 372 523 2.3E-54 T 14-10-2018 IPR001162 UvrC family homology region MC28_3798 adf79b6060f4d1777eff86b485b6c99c 594 Gene3D G3DSA:1.10.150.20 527 589 3.8E-20 T 14-10-2018 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 PRINTS PR01607 Apyrase family signature 36 54 3.2E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 PRINTS PR01607 Apyrase family signature 465 484 3.2E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 PRINTS PR01607 Apyrase family signature 251 274 3.2E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 PRINTS PR01607 Apyrase family signature 394 417 3.2E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 PRINTS PR01607 Apyrase family signature 222 239 3.2E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 PRINTS PR01607 Apyrase family signature 277 297 3.2E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 Gene3D G3DSA:3.60.21.10 35 341 2.2E-85 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 Gene3D G3DSA:3.90.780.10 342 529 4.4E-59 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 SUPERFAMILY SSF56300 33 341 8.51E-81 T 14-10-2018 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 490 1.2E-48 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 Pfam PF00149 Calcineurin-like phosphoesterase 41 269 1.3E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 SUPERFAMILY SSF55816 339 528 3.4E-57 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3393 ef71940f5d24fea01789b3915dd58d80 529 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3120 25a687fe4bd389827f3082614644acb0 255 Gene3D G3DSA:3.30.70.330 79 164 2.2E-29 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily MC28_3120 25a687fe4bd389827f3082614644acb0 255 Gene3D G3DSA:3.10.290.10 174 229 1.2E-10 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_3120 25a687fe4bd389827f3082614644acb0 255 SMART SM00363 179 241 2.0E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3120 25a687fe4bd389827f3082614644acb0 255 Gene3D G3DSA:3.30.1370.160 2 77 3.5E-26 T 14-10-2018 MC28_3120 25a687fe4bd389827f3082614644acb0 255 Pfam PF01479 S4 domain 180 224 4.5E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3120 25a687fe4bd389827f3082614644acb0 255 SUPERFAMILY SSF55174 34 252 3.4E-38 T 14-10-2018 MC28_0904 751e45336e6c689b87653ad40698e6ce 269 Gene3D G3DSA:1.10.8.410 220 268 6.7E-14 T 14-10-2018 MC28_0904 751e45336e6c689b87653ad40698e6ce 269 SUPERFAMILY SSF64518 4 268 6.41E-72 T 14-10-2018 MC28_0904 751e45336e6c689b87653ad40698e6ce 269 Pfam PF00700 Bacterial flagellin C-terminal helical region 183 267 4.3E-20 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MC28_0904 751e45336e6c689b87653ad40698e6ce 269 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 143 1.4E-33 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MC28_0904 751e45336e6c689b87653ad40698e6ce 269 PRINTS PR00207 Flagellin signature 38 55 3.7E-15 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 MC28_0904 751e45336e6c689b87653ad40698e6ce 269 PRINTS PR00207 Flagellin signature 112 135 3.7E-15 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 MC28_0904 751e45336e6c689b87653ad40698e6ce 269 PRINTS PR00207 Flagellin signature 77 96 3.7E-15 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 MC28_0904 751e45336e6c689b87653ad40698e6ce 269 Gene3D G3DSA:1.20.1330.10 51 219 4.4E-43 T 14-10-2018 MC28_3408 5775e20725f15db285c195d43570be67 257 Gene3D G3DSA:3.40.50.150 2 223 3.7E-47 T 14-10-2018 MC28_3408 5775e20725f15db285c195d43570be67 257 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 2 253 26.356 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 MC28_3408 5775e20725f15db285c195d43570be67 257 SUPERFAMILY SSF53335 5 176 5.78E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3408 5775e20725f15db285c195d43570be67 257 Pfam PF13847 Methyltransferase domain 31 153 2.4E-24 T 14-10-2018 IPR025714 Methyltransferase domain MC28_3408 5775e20725f15db285c195d43570be67 257 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 2 253 1.9E-78 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 MC28_2577 e992a1468dcaaa6a1d7b6ac738331184 253 Pfam PF02709 N-terminal domain of galactosyltransferase 154 195 2.1E-5 T 14-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 MC28_2577 e992a1468dcaaa6a1d7b6ac738331184 253 Pfam PF00535 Glycosyl transferase family 2 19 121 8.2E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_2577 e992a1468dcaaa6a1d7b6ac738331184 253 SUPERFAMILY SSF53448 16 218 1.18E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_2577 e992a1468dcaaa6a1d7b6ac738331184 253 Gene3D G3DSA:3.90.550.10 4 207 9.9E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1805 b7c4add415b82930481d8eeca7d61073 413 SUPERFAMILY SSF53474 31 387 3.85E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1805 b7c4add415b82930481d8eeca7d61073 413 Gene3D G3DSA:3.40.50.1820 24 413 3.2E-147 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0863 e3c7665e2b40d724fba9cfd452d68c06 264 PIRSF PIRSF005426 20 264 1.2E-91 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 MC28_0863 e3c7665e2b40d724fba9cfd452d68c06 264 Gene3D G3DSA:3.40.109.10 21 264 4.5E-73 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_0863 e3c7665e2b40d724fba9cfd452d68c06 264 Pfam PF00881 Nitroreductase family 30 181 2.7E-21 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_0863 e3c7665e2b40d724fba9cfd452d68c06 264 SUPERFAMILY SSF55469 21 263 8.51E-71 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 SUPERFAMILY SSF53218 186 329 4.84E-40 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 SUPERFAMILY SSF63882 8 184 1.23E-51 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 Gene3D G3DSA:2.170.190.11 50 150 5.2E-117 T 14-10-2018 MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 SMART SM00852 189 327 2.1E-38 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 Gene3D G3DSA:3.40.980.10 184 336 5.2E-117 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 Pfam PF03454 MoeA C-terminal region (domain IV) 341 411 7.5E-18 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 3.3E-33 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 SUPERFAMILY SSF63867 338 412 1.31E-16 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 176 8.1E-40 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 Pfam PF00994 Probable molybdopterin binding domain 189 326 8.1E-26 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 Gene3D G3DSA:2.40.340.10 337 406 5.2E-117 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4001 1223a1605629640126c1b6f75ac5fc53 429 Gene3D G3DSA:3.90.105.10 26 183 5.2E-117 T 14-10-2018 MC28_F256 ca1320f3e6ebe22cf59465c4e67576ba 79 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 5 76 2.1E-34 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 MC28_F256 ca1320f3e6ebe22cf59465c4e67576ba 79 SUPERFAMILY SSF47336 2 77 4.32E-13 T 14-10-2018 IPR036736 ACP-like superfamily MC28_F256 ca1320f3e6ebe22cf59465c4e67576ba 79 Gene3D G3DSA:1.10.1200.10 2 79 9.4E-21 T 14-10-2018 IPR036736 ACP-like superfamily MC28_F256 ca1320f3e6ebe22cf59465c4e67576ba 79 Hamap MF_00565 D-alanyl carrier protein [dltC]. 1 79 44.474 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 MC28_F256 ca1320f3e6ebe22cf59465c4e67576ba 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 6.9E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 SMART SM00363 352 420 0.0047 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 4.0E-29 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 4.0E-29 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 4.0E-29 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 4.0E-29 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 418 44.142 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 Gene3D G3DSA:3.40.50.620 1 222 1.6E-91 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 Pfam PF00579 tRNA synthetases class I (W and Y) 28 323 1.1E-80 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 Gene3D G3DSA:1.10.240.10 223 325 1.9E-37 T 14-10-2018 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 Pfam PF01479 S4 domain 356 395 1.2E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 SUPERFAMILY SSF55174 321 417 4.97E-23 T 14-10-2018 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 SUPERFAMILY SSF52374 1 323 5.63E-111 T 14-10-2018 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 Gene3D G3DSA:3.10.290.10 326 420 2.7E-31 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_4332 5026a01612ff42fe180acb9d90ffefc2 420 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 417 3.4E-129 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 MC28_3294 0010203f6ed8abd2cd4a15c195510b2c 129 Pfam PF11033 Competence protein J (ComJ) 2 126 8.1E-50 T 14-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ MC28_3294 0010203f6ed8abd2cd4a15c195510b2c 129 Gene3D G3DSA:2.60.34.30 1 123 1.1E-39 T 14-10-2018 IPR038691 DNA-entry nuclease inhibitor, ComJ superfamily MC28_3294 0010203f6ed8abd2cd4a15c195510b2c 129 ProDom PD081734 COMPETENCE J NIN DNA-ENTRY MEMBRANE INHIBITOR NUCLEASE 3 106 4.0E-52 T 14-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ MC28_E169 cf0179abcba048dc2ba4fe9fb2415ff1 611 SUPERFAMILY SSF56672 37 377 2.09E-47 T 14-10-2018 MC28_E169 cf0179abcba048dc2ba4fe9fb2415ff1 611 Pfam PF01348 Type II intron maturase 399 511 1.1E-12 T 14-10-2018 IPR024937 Domain X GO:0006397 MC28_E169 cf0179abcba048dc2ba4fe9fb2415ff1 611 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 95 240 1.3E-30 T 14-10-2018 IPR000477 Reverse transcriptase domain MC28_E169 cf0179abcba048dc2ba4fe9fb2415ff1 611 SMART SM00507 542 603 0.0038 T 14-10-2018 IPR003615 HNH nuclease MC28_3655 de14565e22d4ff7d024bb59187898c79 174 Pfam PF13302 Acetyltransferase (GNAT) domain 12 152 1.0E-28 T 14-10-2018 IPR000182 GNAT domain MC28_3655 de14565e22d4ff7d024bb59187898c79 174 SUPERFAMILY SSF55729 7 157 2.8E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3655 de14565e22d4ff7d024bb59187898c79 174 Gene3D G3DSA:3.40.630.30 2 174 1.2E-38 T 14-10-2018 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 Gene3D G3DSA:1.10.275.10 12 145 1.0E-57 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 PRINTS PR00145 Argininosuccinate lyase family signature 140 162 2.6E-7 T 14-10-2018 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 PRINTS PR00145 Argininosuccinate lyase family signature 181 201 2.6E-7 T 14-10-2018 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 PRINTS PR00145 Argininosuccinate lyase family signature 323 339 2.6E-7 T 14-10-2018 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 12 473 1.4E-233 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 Gene3D G3DSA:1.10.40.30 414 465 2.3E-22 T 14-10-2018 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 SUPERFAMILY SSF48557 12 468 4.71E-148 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 PRINTS PR00149 Fumarate lyase superfamily signature 141 159 3.5E-32 T 14-10-2018 IPR000362 Fumarate lyase family MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 PRINTS PR00149 Fumarate lyase superfamily signature 186 204 3.5E-32 T 14-10-2018 IPR000362 Fumarate lyase family MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 PRINTS PR00149 Fumarate lyase superfamily signature 277 304 3.5E-32 T 14-10-2018 IPR000362 Fumarate lyase family MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 PRINTS PR00149 Fumarate lyase superfamily signature 323 339 3.5E-32 T 14-10-2018 IPR000362 Fumarate lyase family MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 ProSitePatterns PS00163 Fumarate lyases signature. 323 332 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 Pfam PF10415 Fumarase C C-terminus 414 467 1.1E-20 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 Gene3D G3DSA:1.20.200.10 146 413 7.7E-114 T 14-10-2018 MC28_0990 6abcda5b1f2e4bf305ee28b3c49c62b7 479 Pfam PF00206 Lyase 19 348 2.4E-110 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal MC28_5374 cd65db86761b973676d3b7c297303878 185 SUPERFAMILY SSF88659 91 172 5.98E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_5374 cd65db86761b973676d3b7c297303878 185 Gene3D G3DSA:1.10.1740.10 1 114 3.2E-19 T 14-10-2018 MC28_5374 cd65db86761b973676d3b7c297303878 185 SUPERFAMILY SSF88946 3 98 3.14E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_5374 cd65db86761b973676d3b7c297303878 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 169 3.8E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_5374 cd65db86761b973676d3b7c297303878 185 Pfam PF08281 Sigma-70, region 4 115 165 1.6E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_5374 cd65db86761b973676d3b7c297303878 185 Pfam PF04542 Sigma-70 region 2 14 83 5.3E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_5374 cd65db86761b973676d3b7c297303878 185 Gene3D G3DSA:1.10.10.10 115 171 1.2E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1965 6a224bf8e461202584a7cd993d503552 400 Gene3D G3DSA:3.30.559.10 163 398 7.8E-85 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 MC28_1965 6a224bf8e461202584a7cd993d503552 400 SUPERFAMILY SSF47005 115 159 7.98E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 MC28_1965 6a224bf8e461202584a7cd993d503552 400 Pfam PF00364 Biotin-requiring enzyme 4 76 2.7E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment MC28_1965 6a224bf8e461202584a7cd993d503552 400 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 1.3E-82 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 MC28_1965 6a224bf8e461202584a7cd993d503552 400 SUPERFAMILY SSF51230 1 87 9.95E-22 T 14-10-2018 IPR011053 Single hybrid motif MC28_1965 6a224bf8e461202584a7cd993d503552 400 Gene3D G3DSA:2.40.50.100 2 99 7.0E-23 T 14-10-2018 MC28_1965 6a224bf8e461202584a7cd993d503552 400 Gene3D G3DSA:4.10.320.10 111 162 3.6E-15 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 MC28_1965 6a224bf8e461202584a7cd993d503552 400 SUPERFAMILY SSF52777 173 400 1.6E-80 T 14-10-2018 MC28_1965 6a224bf8e461202584a7cd993d503552 400 Pfam PF02817 e3 binding domain 120 155 8.3E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.375 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 SUPERFAMILY SSF53697 244 600 9.8E-94 T 14-10-2018 MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 Gene3D G3DSA:3.40.50.10490 444 600 7.5E-61 T 14-10-2018 MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 Pfam PF01380 SIS domain 457 582 5.7E-17 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 Pfam PF01380 SIS domain 287 413 2.3E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 SUPERFAMILY SSF56235 2 234 6.26E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 Gene3D G3DSA:3.40.50.10490 243 442 6.4E-65 T 14-10-2018 MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 Gene3D G3DSA:3.60.20.10 2 239 1.4E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 3.9E-225 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 MC28_4870 135054ab72939a941eaf7211a5cab0cb 600 Pfam PF13522 Glutamine amidotransferase domain 62 192 8.3E-19 T 14-10-2018 MC28_1801 9b338aa4b8356848e951f4f459f75450 256 SUPERFAMILY SSF52540 3 224 1.14E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1801 9b338aa4b8356848e951f4f459f75450 256 Pfam PF00005 ABC transporter 24 170 3.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1801 9b338aa4b8356848e951f4f459f75450 256 SMART SM00382 31 226 2.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1801 9b338aa4b8356848e951f4f459f75450 256 Gene3D G3DSA:3.40.50.300 1 244 1.8E-64 T 14-10-2018 MC28_1133 0952bd071901ff799328c78d4f930de1 314 Gene3D G3DSA:3.90.110.10 148 313 9.7E-63 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_1133 0952bd071901ff799328c78d4f930de1 314 Gene3D G3DSA:3.40.50.720 2 147 1.9E-59 T 14-10-2018 MC28_1133 0952bd071901ff799328c78d4f930de1 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 145 1.2E-49 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_1133 0952bd071901ff799328c78d4f930de1 314 SUPERFAMILY SSF51735 4 145 1.56E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1133 0952bd071901ff799328c78d4f930de1 314 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 314 47.88 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_1133 0952bd071901ff799328c78d4f930de1 314 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 6.0E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_1133 0952bd071901ff799328c78d4f930de1 314 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 6.0E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_1133 0952bd071901ff799328c78d4f930de1 314 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 6.0E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_1133 0952bd071901ff799328c78d4f930de1 314 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 6.0E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_1133 0952bd071901ff799328c78d4f930de1 314 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 6.0E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_1133 0952bd071901ff799328c78d4f930de1 314 SUPERFAMILY SSF56327 146 312 9.66E-58 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_1133 0952bd071901ff799328c78d4f930de1 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 311 2.1E-37 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 MC28_1133 0952bd071901ff799328c78d4f930de1 314 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_1133 0952bd071901ff799328c78d4f930de1 314 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 308 6.3E-134 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_1133 0952bd071901ff799328c78d4f930de1 314 PIRSF PIRSF000102 2 313 1.1E-114 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_0843 71753c26123d0c39dd5e58fdd4888215 290 Pfam PF01263 Aldose 1-epimerase 2 282 8.3E-34 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 MC28_0843 71753c26123d0c39dd5e58fdd4888215 290 Gene3D G3DSA:2.70.98.10 2 290 1.3E-106 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 MC28_0843 71753c26123d0c39dd5e58fdd4888215 290 SUPERFAMILY SSF74650 4 289 5.02E-56 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 TIGRFAM TIGR00235 udk: uridine kinase 2 207 9.7E-91 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 8 193 2.3E-40 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 SUPERFAMILY SSF52540 4 198 3.93E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3671 bca9c1ccea591a946729d86e30851eff 212 Hamap MF_00551 Uridine kinase [udk]. 3 207 40.893 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 PRINTS PR00988 Uridine kinase signature 36 47 1.4E-36 T 14-10-2018 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 PRINTS PR00988 Uridine kinase signature 173 186 1.4E-36 T 14-10-2018 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 PRINTS PR00988 Uridine kinase signature 6 23 1.4E-36 T 14-10-2018 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 PRINTS PR00988 Uridine kinase signature 137 147 1.4E-36 T 14-10-2018 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 PRINTS PR00988 Uridine kinase signature 81 96 1.4E-36 T 14-10-2018 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 PRINTS PR00988 Uridine kinase signature 151 162 1.4E-36 T 14-10-2018 MC28_3671 bca9c1ccea591a946729d86e30851eff 212 Gene3D G3DSA:3.40.50.300 2 211 1.1E-65 T 14-10-2018 MC28_4838 fa26a9fcf000bb97cd454396de6e4d85 120 Gene3D G3DSA:3.30.420.100 5 120 5.7E-48 T 14-10-2018 MC28_4838 fa26a9fcf000bb97cd454396de6e4d85 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 30.937 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4838 fa26a9fcf000bb97cd454396de6e4d85 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 2.6E-49 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4838 fa26a9fcf000bb97cd454396de6e4d85 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 6.8E-53 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4838 fa26a9fcf000bb97cd454396de6e4d85 120 SUPERFAMILY SSF53137 7 118 3.49E-56 T 14-10-2018 MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 SUPERFAMILY SSF55890 324 365 2.62E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 503 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 470 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 484 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 SUPERFAMILY SSF55785 218 309 2.03E-7 T 14-10-2018 IPR035965 PAS domain superfamily MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 SUPERFAMILY SSF55874 394 524 1.83E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 SMART SM00091 218 283 8.2E-4 T 14-10-2018 IPR000014 PAS domain MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 Gene3D G3DSA:3.30.450.20 33 169 3.9E-27 T 14-10-2018 MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 524 5.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 Gene3D G3DSA:3.30.450.20 204 312 5.6E-22 T 14-10-2018 MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 SMART SM00387 417 525 5.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 Gene3D G3DSA:3.30.565.10 383 527 6.6E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 365 3.2E-9 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 SUPERFAMILY SSF103190 42 172 1.02E-25 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily MC28_0178 48ecbcdd0cf0f5abd5dee8b662006298 529 Pfam PF17203 Single cache domain 3 40 169 2.1E-14 T 14-10-2018 IPR033463 Single cache domain 3 MC28_5384 685d5751e63b92aae76423e8930c9900 449 ProSitePatterns PS00942 glpT family of transporters signature. 155 171 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 MC28_5384 685d5751e63b92aae76423e8930c9900 449 Pfam PF07690 Major Facilitator Superfamily 36 402 7.0E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_5384 685d5751e63b92aae76423e8930c9900 449 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 37 421 6.4E-153 T 14-10-2018 MC28_5384 685d5751e63b92aae76423e8930c9900 449 Gene3D G3DSA:1.20.1250.20 20 229 1.4E-56 T 14-10-2018 MC28_5384 685d5751e63b92aae76423e8930c9900 449 Gene3D G3DSA:1.20.1250.20 244 446 1.3E-54 T 14-10-2018 MC28_5384 685d5751e63b92aae76423e8930c9900 449 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 5 442 3.5E-226 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 MC28_5384 685d5751e63b92aae76423e8930c9900 449 SUPERFAMILY SSF103473 12 439 1.44E-78 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_5384 685d5751e63b92aae76423e8930c9900 449 PIRSF PIRSF002808 7 449 5.1E-165 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 MC28_3581 5f466a643ece1bf98bb4c53024a340e8 373 PIRSF PIRSF037489 4 373 3.0E-160 T 14-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria MC28_3581 5f466a643ece1bf98bb4c53024a340e8 373 SUPERFAMILY SSF102705 6 372 5.1E-135 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily MC28_3581 5f466a643ece1bf98bb4c53024a340e8 373 Gene3D G3DSA:3.40.1390.30 3 126 2.0E-39 T 14-10-2018 MC28_3581 5f466a643ece1bf98bb4c53024a340e8 373 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 352 3.2E-84 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 MC28_3581 5f466a643ece1bf98bb4c53024a340e8 373 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 368 1.2E-88 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 MC28_3581 5f466a643ece1bf98bb4c53024a340e8 373 Gene3D G3DSA:3.30.70.120 133 242 4.4E-46 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 SUPERFAMILY SSF52499 1 217 2.49E-62 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 Pfam PF00857 Isochorismatase family 32 203 1.4E-39 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 SUPERFAMILY SSF47336 220 293 1.83E-11 T 14-10-2018 IPR036736 ACP-like superfamily MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 Pfam PF00550 Phosphopantetheine attachment site 225 287 3.4E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 PIRSF PIRSF001111 1 297 3.0E-134 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 Gene3D G3DSA:3.40.50.850 1 207 1.4E-75 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 Gene3D G3DSA:1.10.1200.10 221 293 4.5E-24 T 14-10-2018 IPR036736 ACP-like superfamily MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 PRINTS PR01398 Isochorismatase signature 112 134 1.3E-45 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 PRINTS PR01398 Isochorismatase signature 63 80 1.3E-45 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 PRINTS PR01398 Isochorismatase signature 186 203 1.3E-45 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 PRINTS PR01398 Isochorismatase signature 80 99 1.3E-45 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 PRINTS PR01398 Isochorismatase signature 168 186 1.3E-45 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 MC28_1577 3cf0947343efeb7a75b51ef2e4dee8c7 297 PRINTS PR01398 Isochorismatase signature 2 14 1.3E-45 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 MC28_4574 2e1a6061c0da2f951e300410a0997988 535 Gene3D G3DSA:3.40.50.880 286 535 3.5E-102 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4574 2e1a6061c0da2f951e300410a0997988 535 SUPERFAMILY SSF52317 289 533 3.52E-83 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4574 2e1a6061c0da2f951e300410a0997988 535 Gene3D G3DSA:3.40.50.300 1 285 1.5E-135 T 14-10-2018 MC28_4574 2e1a6061c0da2f951e300410a0997988 535 Pfam PF06418 CTP synthase N-terminus 3 267 8.1E-131 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 MC28_4574 2e1a6061c0da2f951e300410a0997988 535 Hamap MF_01227 CTP synthase [pyrG]. 2 532 52.94 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 MC28_4574 2e1a6061c0da2f951e300410a0997988 535 SUPERFAMILY SSF52540 1 269 3.0E-127 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4574 2e1a6061c0da2f951e300410a0997988 535 Pfam PF00117 Glutamine amidotransferase class-I 302 526 8.0E-60 T 14-10-2018 IPR017926 Glutamine amidotransferase MC28_4574 2e1a6061c0da2f951e300410a0997988 535 TIGRFAM TIGR00337 PyrG: CTP synthase 1 527 1.3E-263 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 MC28_2892 958d8b88d0fc32598c3687d33d6d5589 93 Pfam PF00216 Bacterial DNA-binding protein 4 93 1.1E-35 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_2892 958d8b88d0fc32598c3687d33d6d5589 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MC28_2892 958d8b88d0fc32598c3687d33d6d5589 93 Gene3D G3DSA:4.10.520.10 1 93 9.5E-40 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_2892 958d8b88d0fc32598c3687d33d6d5589 93 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 2.3E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_2892 958d8b88d0fc32598c3687d33d6d5589 93 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 2.3E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_2892 958d8b88d0fc32598c3687d33d6d5589 93 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 2.3E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_2892 958d8b88d0fc32598c3687d33d6d5589 93 SUPERFAMILY SSF47729 4 93 4.12E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_2892 958d8b88d0fc32598c3687d33d6d5589 93 SMART SM00411 4 93 1.4E-47 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 262 271 8.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 8.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 8.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 274 297 8.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 Gene3D G3DSA:3.40.50.1370 13 305 1.5E-130 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 12 148 2.7E-50 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 11 310 80.735 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 307 6.6E-56 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 7.9E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 7.9E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 288 299 7.9E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 227 237 7.9E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 7.9E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 Gene3D G3DSA:3.40.50.1370 138 296 1.5E-130 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 12 309 9.5E-130 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_3420 fc6e7380bf94feea5b3df49047fabb1d 316 SUPERFAMILY SSF53671 9 311 1.07E-107 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 MC28_2571 204738e3e66f6ea9ee81f3c78d4c11af 107 Gene3D G3DSA:1.10.10.10 1 107 4.3E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2571 204738e3e66f6ea9ee81f3c78d4c11af 107 Pfam PF01638 HxlR-like helix-turn-helix 15 100 2.1E-35 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type MC28_2571 204738e3e66f6ea9ee81f3c78d4c11af 107 SUPERFAMILY SSF46785 4 102 1.14E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 SUPERFAMILY SSF48008 86 224 2.01E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 Pfam PF07729 FCD domain 90 215 2.5E-16 T 14-10-2018 IPR011711 GntR, C-terminal MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 80 4.8E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 Gene3D G3DSA:1.20.120.530 84 221 7.5E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 SMART SM00895 90 219 2.3E-6 T 14-10-2018 IPR011711 GntR, C-terminal MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 SUPERFAMILY SSF46785 14 84 8.79E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 SMART SM00345 23 81 1.4E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 2.4E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 2.4E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_G251 25549f2d45ff5a9cbed9f4df270166d3 243 Gene3D G3DSA:1.10.10.10 15 81 1.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0069 3ea825bc7eae7b27f18253051594db70 436 PIRSF PIRSF006351 1 434 2.2E-140 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 MC28_0069 3ea825bc7eae7b27f18253051594db70 436 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 425 1.8E-117 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 MC28_0069 3ea825bc7eae7b27f18253051594db70 436 Pfam PF02378 Phosphotransferase system, EIIC 29 352 6.3E-59 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 Gene3D G3DSA:3.40.50.11610 726 935 4.1E-149 T 14-10-2018 MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 SUPERFAMILY SSF52518 152 521 5.89E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 SMART SM00861 590 786 1.2E-42 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 Gene3D G3DSA:3.40.50.970 155 528 8.5E-134 T 14-10-2018 MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 SUPERFAMILY SSF52518 572 791 5.99E-43 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 1 939 23.329 T 14-10-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 PIRSF PIRSF000157 1 939 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 937 7.0E-37 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 Pfam PF00676 Dehydrogenase E1 component 223 522 2.0E-62 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 Gene3D G3DSA:3.40.50.12470 548 808 4.1E-149 T 14-10-2018 MC28_0484 28dcb99b6d0ebfa6fa990d0dab28cd40 955 Pfam PF02779 Transketolase, pyrimidine binding domain 589 787 1.1E-54 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_D166 0e6b2fefacde88f56b7db3b39c409fd3 301 Gene3D G3DSA:2.170.15.10 69 235 3.5E-27 T 14-10-2018 MC28_D166 0e6b2fefacde88f56b7db3b39c409fd3 301 Pfam PF03318 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 75 218 2.8E-21 T 14-10-2018 IPR004991 Aerolysin-like toxin MC28_D166 0e6b2fefacde88f56b7db3b39c409fd3 301 SUPERFAMILY SSF56973 69 266 1.14E-19 T 14-10-2018 MC28_G196 51f931bb315fb7c4c37843a025ab5fdc 111 Pfam PF07883 Cupin domain 35 98 1.5E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_G196 51f931bb315fb7c4c37843a025ab5fdc 111 SUPERFAMILY SSF51182 21 104 1.01E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_G196 51f931bb315fb7c4c37843a025ab5fdc 111 Gene3D G3DSA:2.60.120.10 2 108 1.4E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_G103 39bf8921c87e37aaf6e2bb92b862ded0 145 Gene3D G3DSA:3.40.1580.10 3 145 1.4E-35 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily MC28_G103 39bf8921c87e37aaf6e2bb92b862ded0 145 SUPERFAMILY SSF160631 2 142 2.22E-31 T 14-10-2018 MC28_G103 39bf8921c87e37aaf6e2bb92b862ded0 145 SMART SM00860 21 134 7.1E-8 T 14-10-2018 IPR018958 Knr4/Smi1-like domain MC28_G103 39bf8921c87e37aaf6e2bb92b862ded0 145 Pfam PF14567 SMI1-KNR4 cell-wall 3 135 6.3E-28 T 14-10-2018 MC28_2881 d787f57272fe812d57d8c3eaedf3965a 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 6.7E-115 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 MC28_2881 d787f57272fe812d57d8c3eaedf3965a 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 MC28_2881 d787f57272fe812d57d8c3eaedf3965a 303 PIRSF PIRSF000535 1 302 1.5E-93 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 MC28_2881 d787f57272fe812d57d8c3eaedf3965a 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 300 4.0E-113 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 MC28_2881 d787f57272fe812d57d8c3eaedf3965a 303 SUPERFAMILY SSF53613 1 282 2.65E-69 T 14-10-2018 IPR029056 Ribokinase-like MC28_2881 d787f57272fe812d57d8c3eaedf3965a 303 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 MC28_2881 d787f57272fe812d57d8c3eaedf3965a 303 Pfam PF00294 pfkB family carbohydrate kinase 7 280 3.3E-52 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB MC28_2881 d787f57272fe812d57d8c3eaedf3965a 303 Gene3D G3DSA:3.40.1190.20 1 302 2.1E-111 T 14-10-2018 IPR029056 Ribokinase-like MC28_5098 a4f458442973b09db4ad3f667319bb39 729 SUPERFAMILY SSF56712 3 598 5.62E-177 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain MC28_5098 a4f458442973b09db4ad3f667319bb39 729 Pfam PF01751 Toprim domain 5 134 1.7E-16 T 14-10-2018 IPR006171 TOPRIM domain MC28_5098 a4f458442973b09db4ad3f667319bb39 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 512 526 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 305 314 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 Gene3D G3DSA:2.70.20.10 210 477 2.7E-147 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 SMART SM00493 3 126 3.7E-18 T 14-10-2018 IPR006171 TOPRIM domain MC28_5098 a4f458442973b09db4ad3f667319bb39 729 Gene3D G3DSA:3.40.50.140 3 154 3.6E-54 T 14-10-2018 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 SMART SM00437 262 549 6.3E-83 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 Gene3D G3DSA:1.10.290.10 271 401 2.7E-147 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 SMART SM00436 126 216 1.1E-35 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 727 2.6E-262 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 Gene3D G3DSA:1.10.460.10 160 593 2.7E-147 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 Pfam PF01131 DNA topoisomerase 152 583 2.5E-117 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 638 72.108 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 MC28_5098 a4f458442973b09db4ad3f667319bb39 729 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 314 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 MC28_4204 5f3e7ae771449d3c944cb325cadb77a3 288 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 MC28_4204 5f3e7ae771449d3c944cb325cadb77a3 288 SUPERFAMILY SSF54506 3 284 4.59E-52 T 14-10-2018 MC28_4204 5f3e7ae771449d3c944cb325cadb77a3 288 Gene3D G3DSA:3.10.310.10 6 280 8.4E-119 T 14-10-2018 MC28_4204 5f3e7ae771449d3c944cb325cadb77a3 288 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 283 1.3E-96 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 MC28_4204 5f3e7ae771449d3c944cb325cadb77a3 288 Gene3D G3DSA:3.10.310.10 126 274 8.4E-119 T 14-10-2018 MC28_4204 5f3e7ae771449d3c944cb325cadb77a3 288 Pfam PF01678 Diaminopimelate epimerase 161 276 2.2E-35 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 MC28_4204 5f3e7ae771449d3c944cb325cadb77a3 288 Pfam PF01678 Diaminopimelate epimerase 6 130 5.1E-31 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 MC28_4204 5f3e7ae771449d3c944cb325cadb77a3 288 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 4 284 37.921 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 Gene3D G3DSA:3.30.930.10 3 284 6.0E-108 T 14-10-2018 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 Gene3D G3DSA:3.40.50.800 285 400 8.6E-36 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 Gene3D G3DSA:3.30.110.30 403 476 4.9E-23 T 14-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 409 476 1.4E-22 T 14-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 SUPERFAMILY SSF52954 279 401 1.23E-33 T 14-10-2018 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 SMART SM00946 409 476 7.4E-31 T 14-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 SUPERFAMILY SSF55681 13 277 8.64E-81 T 14-10-2018 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 Pfam PF03129 Anticodon binding domain 291 381 4.2E-22 T 14-10-2018 IPR004154 Anticodon-binding MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 Hamap MF_01571 Proline--tRNA ligase [proS]. 9 476 44.75 T 14-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 PRINTS PR01046 Prolyl-tRNA synthetase signature 138 146 4.1E-10 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 PRINTS PR01046 Prolyl-tRNA synthetase signature 108 119 4.1E-10 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 PRINTS PR01046 Prolyl-tRNA synthetase signature 147 158 4.1E-10 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 PRINTS PR01046 Prolyl-tRNA synthetase signature 67 85 4.1E-10 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 105 269 1.3E-19 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 10 476 1.4E-189 T 14-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 MC28_5120 e54cfbdb9bd9b05b510d90eed27f83b3 476 SUPERFAMILY SSF64586 404 476 1.04E-22 T 14-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 MC28_4642 564bf26696f1cca9e875a384402e50dc 223 SUPERFAMILY SSF51206 28 138 3.27E-23 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like MC28_4642 564bf26696f1cca9e875a384402e50dc 223 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 3.9E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_4642 564bf26696f1cca9e875a384402e50dc 223 Gene3D G3DSA:2.60.120.1460 26 214 1.1E-24 T 14-10-2018 MC28_4642 564bf26696f1cca9e875a384402e50dc 223 SMART SM00100 15 136 4.8E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_4642 564bf26696f1cca9e875a384402e50dc 223 SUPERFAMILY SSF46785 151 219 2.99E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1147 c1b7807b19cf02f7973548bbcde7210e 467 PIRSF PIRSF006446 1 467 2.6E-179 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 MC28_1147 c1b7807b19cf02f7973548bbcde7210e 467 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 441 2.5E-170 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 MC28_5009 4bb01a7e4936b89631770240a639eaed 471 Gene3D G3DSA:3.40.50.2020 270 434 9.6E-168 T 14-10-2018 MC28_5009 4bb01a7e4936b89631770240a639eaed 471 SUPERFAMILY SSF56235 12 239 1.97E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_5009 4bb01a7e4936b89631770240a639eaed 471 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 456 1.5E-168 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 MC28_5009 4bb01a7e4936b89631770240a639eaed 471 PIRSF PIRSF000485 8 471 1.1E-185 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 MC28_5009 4bb01a7e4936b89631770240a639eaed 471 Pfam PF00156 Phosphoribosyl transferase domain 268 381 5.0E-8 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 MC28_5009 4bb01a7e4936b89631770240a639eaed 471 SUPERFAMILY SSF53271 246 463 3.54E-77 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_5009 4bb01a7e4936b89631770240a639eaed 471 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 455 47.59 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 MC28_5009 4bb01a7e4936b89631770240a639eaed 471 Pfam PF13537 Glutamine amidotransferase domain 93 208 8.0E-22 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain MC28_5009 4bb01a7e4936b89631770240a639eaed 471 Gene3D G3DSA:3.60.20.10 12 457 9.6E-168 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_2384 7ffd1d9cf5a5dd8fd3ea4c74d6f217ce 279 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 7 210 2.8E-60 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_2384 7ffd1d9cf5a5dd8fd3ea4c74d6f217ce 279 Gene3D G3DSA:3.30.70.120 188 263 9.7E-23 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_2384 7ffd1d9cf5a5dd8fd3ea4c74d6f217ce 279 PIRSF PIRSF006483 1 278 1.5E-81 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_2384 7ffd1d9cf5a5dd8fd3ea4c74d6f217ce 279 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 4.9E-22 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_2714 0a4c4ebd3e57d9d7e03bfb5d3944b6a5 140 Gene3D G3DSA:3.90.1170.40 1 135 2.0E-51 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 MC28_2714 0a4c4ebd3e57d9d7e03bfb5d3944b6a5 140 SUPERFAMILY SSF54690 5 125 2.22E-44 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 MC28_2714 0a4c4ebd3e57d9d7e03bfb5d3944b6a5 140 Pfam PF02391 MoaE protein 2 105 7.4E-36 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 MC28_0872 6ef28a979059fede039e3e0f58d0d997 200 Gene3D G3DSA:1.10.3210.10 2 191 7.6E-48 T 14-10-2018 MC28_0872 6ef28a979059fede039e3e0f58d0d997 200 SUPERFAMILY SSF109604 3 175 9.94E-37 T 14-10-2018 MC28_0872 6ef28a979059fede039e3e0f58d0d997 200 Pfam PF13023 HD domain 12 169 2.2E-48 T 14-10-2018 IPR006674 HD domain MC28_3366 8c5027cd2ac33ffafda0022d13038cfe 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 34.875 T 14-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 MC28_3366 8c5027cd2ac33ffafda0022d13038cfe 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 1 136 1.3E-70 T 14-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 MC28_3366 8c5027cd2ac33ffafda0022d13038cfe 146 Pfam PF13581 Histidine kinase-like ATPase domain 10 136 5.9E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3366 8c5027cd2ac33ffafda0022d13038cfe 146 SMART SM00387 35 140 7.7E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3366 8c5027cd2ac33ffafda0022d13038cfe 146 Gene3D G3DSA:3.30.565.10 1 142 1.3E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3366 8c5027cd2ac33ffafda0022d13038cfe 146 SUPERFAMILY SSF55874 28 135 7.33E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2257 15472365b5c374531e203aa137f77803 180 Pfam PF00293 NUDIX domain 12 114 1.0E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_2257 15472365b5c374531e203aa137f77803 180 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_2257 15472365b5c374531e203aa137f77803 180 Gene3D G3DSA:3.90.79.10 7 166 3.6E-28 T 14-10-2018 MC28_2257 15472365b5c374531e203aa137f77803 180 SUPERFAMILY SSF55811 10 151 2.3E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_G314 466faaa5d3c55c5a00b9e0c6722dec49 114 Gene3D G3DSA:1.10.10.10 19 113 9.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G314 466faaa5d3c55c5a00b9e0c6722dec49 114 Pfam PF01022 Bacterial regulatory protein, arsR family 43 83 6.1E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_G314 466faaa5d3c55c5a00b9e0c6722dec49 114 SMART SM00418 36 114 2.4E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_G314 466faaa5d3c55c5a00b9e0c6722dec49 114 SUPERFAMILY SSF46785 30 112 5.15E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1739 88e4fcebc2477ef11aa9d35fb4de81b9 62 Pfam PF04977 Septum formation initiator 8 61 1.2E-12 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC MC28_4944 9e3b814d2f14745254affa788ec0898f 722 Gene3D G3DSA:1.10.150.310 495 629 1.4E-44 T 14-10-2018 MC28_4944 9e3b814d2f14745254affa788ec0898f 722 SUPERFAMILY SSF158832 9 317 2.22E-114 T 14-10-2018 MC28_4944 9e3b814d2f14745254affa788ec0898f 722 Pfam PF16921 Tex protein YqgF-like domain 322 447 6.3E-56 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain MC28_4944 9e3b814d2f14745254affa788ec0898f 722 Gene3D G3DSA:2.40.50.140 633 720 2.1E-25 T 14-10-2018 MC28_4944 9e3b814d2f14745254affa788ec0898f 722 SUPERFAMILY SSF53098 318 465 7.21E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_4944 9e3b814d2f14745254affa788ec0898f 722 Pfam PF12836 Helix-hairpin-helix motif 487 551 6.0E-26 T 14-10-2018 MC28_4944 9e3b814d2f14745254affa788ec0898f 722 SMART SM00732 322 420 4.4E-32 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 MC28_4944 9e3b814d2f14745254affa788ec0898f 722 Pfam PF00575 S1 RNA binding domain 648 718 3.5E-17 T 14-10-2018 IPR003029 S1 domain GO:0003676 MC28_4944 9e3b814d2f14745254affa788ec0898f 722 SUPERFAMILY SSF47781 466 552 8.89E-26 T 14-10-2018 IPR010994 RuvA domain 2-like MC28_4944 9e3b814d2f14745254affa788ec0898f 722 Gene3D G3DSA:1.10.3500.10 117 494 8.7E-155 T 14-10-2018 IPR023323 Tex-like domain superfamily MC28_4944 9e3b814d2f14745254affa788ec0898f 722 SUPERFAMILY SSF50249 634 720 6.56E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4944 9e3b814d2f14745254affa788ec0898f 722 Pfam PF09371 Tex-like protein N-terminal domain 15 197 3.8E-69 T 14-10-2018 IPR018974 Tex-like protein, N-terminal MC28_4944 9e3b814d2f14745254affa788ec0898f 722 Gene3D G3DSA:3.30.420.140 321 447 8.7E-155 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 MC28_4944 9e3b814d2f14745254affa788ec0898f 722 SUPERFAMILY SSF47781 557 631 2.67E-14 T 14-10-2018 IPR010994 RuvA domain 2-like MC28_4944 9e3b814d2f14745254affa788ec0898f 722 Gene3D G3DSA:1.10.10.650 4 114 1.8E-36 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily MC28_4944 9e3b814d2f14745254affa788ec0898f 722 SMART SM00316 648 719 1.2E-22 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_3604 49affef9ba660af3094bbe6767c502a4 368 PRINTS PR00625 DnaJ domain signature 41 61 5.5E-32 T 14-10-2018 IPR001623 DnaJ domain MC28_3604 49affef9ba660af3094bbe6767c502a4 368 PRINTS PR00625 DnaJ domain signature 7 25 5.5E-32 T 14-10-2018 IPR001623 DnaJ domain MC28_3604 49affef9ba660af3094bbe6767c502a4 368 PRINTS PR00625 DnaJ domain signature 25 40 5.5E-32 T 14-10-2018 IPR001623 DnaJ domain MC28_3604 49affef9ba660af3094bbe6767c502a4 368 PRINTS PR00625 DnaJ domain signature 61 80 5.5E-32 T 14-10-2018 IPR001623 DnaJ domain MC28_3604 49affef9ba660af3094bbe6767c502a4 368 SUPERFAMILY SSF49493 110 263 5.1E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 MC28_3604 49affef9ba660af3094bbe6767c502a4 368 Pfam PF01556 DnaJ C terminal domain 116 333 1.5E-43 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal MC28_3604 49affef9ba660af3094bbe6767c502a4 368 Gene3D G3DSA:1.10.287.110 1 107 4.4E-38 T 14-10-2018 IPR036869 Chaperone J-domain superfamily MC28_3604 49affef9ba660af3094bbe6767c502a4 368 Gene3D G3DSA:2.60.260.20 253 333 1.7E-30 T 14-10-2018 MC28_3604 49affef9ba660af3094bbe6767c502a4 368 SUPERFAMILY SSF46565 1 101 2.09E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily MC28_3604 49affef9ba660af3094bbe6767c502a4 368 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 14-10-2018 IPR018253 DnaJ domain, conserved site MC28_3604 49affef9ba660af3094bbe6767c502a4 368 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 364 41.307 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 MC28_3604 49affef9ba660af3094bbe6767c502a4 368 SUPERFAMILY SSF49493 258 344 5.23E-25 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 MC28_3604 49affef9ba660af3094bbe6767c502a4 368 Gene3D G3DSA:2.10.230.10 143 207 8.6E-36 T 14-10-2018 MC28_3604 49affef9ba660af3094bbe6767c502a4 368 SMART SM00271 4 61 1.5E-30 T 14-10-2018 IPR001623 DnaJ domain MC28_3604 49affef9ba660af3094bbe6767c502a4 368 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 1.2E-141 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 MC28_3604 49affef9ba660af3094bbe6767c502a4 368 Pfam PF00684 DnaJ central domain 143 207 1.2E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 MC28_3604 49affef9ba660af3094bbe6767c502a4 368 Pfam PF00226 DnaJ domain 5 66 1.6E-27 T 14-10-2018 IPR001623 DnaJ domain MC28_3604 49affef9ba660af3094bbe6767c502a4 368 SUPERFAMILY SSF57938 130 211 1.83E-18 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily MC28_3604 49affef9ba660af3094bbe6767c502a4 368 Gene3D G3DSA:2.60.260.20 113 249 8.6E-36 T 14-10-2018 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 SUPERFAMILY SSF51735 3 145 1.02E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 145 2.8E-47 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 311 1.7E-36 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 SUPERFAMILY SSF56327 146 311 3.17E-56 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 308 2.6E-132 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 Gene3D G3DSA:3.90.110.10 148 313 4.0E-62 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 PIRSF PIRSF000102 2 313 2.6E-112 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 Gene3D G3DSA:3.40.50.720 2 147 1.5E-58 T 14-10-2018 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 2.5E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 2.5E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 2.5E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 2.5E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 2.5E-49 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_F059 aabdc79fb7a6e194516470ba54ca44b2 314 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 314 46.827 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 Gene3D G3DSA:3.20.20.80 110 436 2.3E-95 T 14-10-2018 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 SUPERFAMILY SSF49265 434 616 2.41E-25 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 SMART SM00495 47 91 0.97 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 SMART SM00495 622 668 1.1 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 Gene3D G3DSA:2.60.40.10 527 614 8.9E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 Gene3D G3DSA:2.60.40.10 437 520 1.0E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 SUPERFAMILY SSF51445 117 390 1.33E-26 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 SMART SM00060 530 604 3.0E-8 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 SMART SM00060 434 509 7.6E-12 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 Gene3D G3DSA:2.10.10.20 622 667 6.8E-5 T 14-10-2018 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 Pfam PF00041 Fibronectin type III domain 436 511 2.4E-7 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 Pfam PF00041 Fibronectin type III domain 532 601 3.3E-6 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_F106 d839cc6ab2202ecb4038ab2196e342ed 669 SUPERFAMILY SSF51055 39 91 4.71E-5 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 Gene3D G3DSA:3.60.21.10 35 341 2.9E-82 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 Gene3D G3DSA:3.90.780.10 346 527 1.7E-57 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 490 4.9E-46 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 SUPERFAMILY SSF55816 339 529 8.63E-55 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 SUPERFAMILY SSF56300 34 341 6.73E-78 T 14-10-2018 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 PRINTS PR01607 Apyrase family signature 36 54 5.5E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 PRINTS PR01607 Apyrase family signature 222 239 5.5E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 PRINTS PR01607 Apyrase family signature 394 417 5.5E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 PRINTS PR01607 Apyrase family signature 251 274 5.5E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 PRINTS PR01607 Apyrase family signature 465 484 5.5E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 PRINTS PR01607 Apyrase family signature 277 297 5.5E-25 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 Pfam PF00149 Calcineurin-like phosphoesterase 41 269 5.2E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_2298 fcdb245c08eb7756c1320047b829eb21 529 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3653 acf4531e1f3e2dbe7981c5e2b6daf875 125 Gene3D G3DSA:3.10.129.10 1 125 6.2E-20 T 14-10-2018 MC28_3653 acf4531e1f3e2dbe7981c5e2b6daf875 125 SUPERFAMILY SSF54637 4 123 6.56E-22 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_3653 acf4531e1f3e2dbe7981c5e2b6daf875 125 Pfam PF01575 MaoC like domain 9 101 7.7E-6 T 14-10-2018 IPR002539 MaoC-like dehydratase domain MC28_2014 a98c9f15a5a4a6b7b9efb3888411469c 176 Pfam PF05163 DinB family 5 168 8.5E-26 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB MC28_2014 a98c9f15a5a4a6b7b9efb3888411469c 176 SUPERFAMILY SSF109854 7 157 1.65E-27 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2014 a98c9f15a5a4a6b7b9efb3888411469c 176 Gene3D G3DSA:1.20.120.450 2 171 1.2E-38 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_5341 597dfc724867572da677011f58de688a 334 Pfam PF01032 FecCD transport family 20 329 9.3E-93 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_5341 597dfc724867572da677011f58de688a 334 SUPERFAMILY SSF81345 4 329 2.35E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_5341 597dfc724867572da677011f58de688a 334 Gene3D G3DSA:1.10.3470.10 6 333 2.5E-93 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_5431 c69a62f60f20283be32533df67b24884 399 Pfam PF01546 Peptidase family M20/M25/M40 80 392 1.1E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_5431 c69a62f60f20283be32533df67b24884 399 Gene3D G3DSA:3.30.70.360 189 303 1.4E-138 T 14-10-2018 MC28_5431 c69a62f60f20283be32533df67b24884 399 SUPERFAMILY SSF53187 19 397 2.31E-82 T 14-10-2018 MC28_5431 c69a62f60f20283be32533df67b24884 399 SUPERFAMILY SSF55031 192 303 5.1E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_5431 c69a62f60f20283be32533df67b24884 399 Pfam PF07687 Peptidase dimerisation domain 194 289 2.1E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_5431 c69a62f60f20283be32533df67b24884 399 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 22 383 1.8E-116 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_5431 c69a62f60f20283be32533df67b24884 399 PIRSF PIRSF005962 7 399 3.2E-135 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_5431 c69a62f60f20283be32533df67b24884 399 Gene3D G3DSA:3.40.630.10 22 380 1.4E-138 T 14-10-2018 MC28_0449 a7a426cb11660fc918d21c1c3acbc1b7 688 Pfam PF13361 UvrD-like helicase C-terminal domain 314 659 2.6E-43 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 MC28_0449 a7a426cb11660fc918d21c1c3acbc1b7 688 Gene3D G3DSA:3.40.50.300 319 674 3.4E-72 T 14-10-2018 MC28_0449 a7a426cb11660fc918d21c1c3acbc1b7 688 SUPERFAMILY SSF52540 45 682 9.11E-129 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0449 a7a426cb11660fc918d21c1c3acbc1b7 688 Gene3D G3DSA:1.10.486.10 421 578 3.4E-72 T 14-10-2018 MC28_0449 a7a426cb11660fc918d21c1c3acbc1b7 688 Gene3D G3DSA:3.40.50.300 51 309 1.9E-79 T 14-10-2018 MC28_0449 a7a426cb11660fc918d21c1c3acbc1b7 688 Gene3D G3DSA:1.10.10.160 150 226 1.9E-79 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily MC28_0449 a7a426cb11660fc918d21c1c3acbc1b7 688 Pfam PF00580 UvrD/REP helicase N-terminal domain 51 309 2.2E-57 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 MC28_5265 fc28e0930f3b782352eb22210f1219b8 246 Gene3D G3DSA:1.10.10.200 7 86 9.4E-25 T 14-10-2018 IPR017856 Integrase-like, N-terminal MC28_5265 fc28e0930f3b782352eb22210f1219b8 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 8 242 1.4E-72 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5265 fc28e0930f3b782352eb22210f1219b8 246 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 8 245 55.046 T 14-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN MC28_5265 fc28e0930f3b782352eb22210f1219b8 246 Gene3D G3DSA:3.30.70.980 134 210 1.5E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5265 fc28e0930f3b782352eb22210f1219b8 246 Pfam PF01709 Transcriptional regulator 11 242 2.0E-82 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5265 fc28e0930f3b782352eb22210f1219b8 246 Gene3D G3DSA:3.30.70.980 90 241 1.5E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5265 fc28e0930f3b782352eb22210f1219b8 246 SUPERFAMILY SSF75625 8 245 1.96E-81 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5265 fc28e0930f3b782352eb22210f1219b8 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 8 244 32.139 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_2364 d7c538eba50ed0978dab0cd1c7d3e2d0 410 SUPERFAMILY SSF56300 34 321 4.43E-33 T 14-10-2018 MC28_2364 d7c538eba50ed0978dab0cd1c7d3e2d0 410 Pfam PF13285 Domain of unknown function (DUF4073) 251 407 5.3E-97 T 14-10-2018 IPR025142 Domain of unknown function DUF4073 MC28_2364 d7c538eba50ed0978dab0cd1c7d3e2d0 410 Pfam PF00149 Calcineurin-like phosphoesterase 35 250 4.0E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 SUPERFAMILY SSF53738 306 457 3.77E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 Gene3D G3DSA:3.30.310.50 466 570 1.8E-9 T 14-10-2018 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 Gene3D G3DSA:3.40.120.10 209 326 2.9E-21 T 14-10-2018 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 3.0E-22 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 SUPERFAMILY SSF53738 29 238 9.81E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 Gene3D G3DSA:3.40.120.10 33 190 2.6E-47 T 14-10-2018 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 SUPERFAMILY SSF53738 209 317 1.69E-19 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 Gene3D G3DSA:3.40.120.10 327 454 1.3E-36 T 14-10-2018 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 SUPERFAMILY SSF55957 470 556 3.14E-15 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 326 453 2.0E-22 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 495 555 5.2E-11 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 180 3.1E-41 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 298 313 1.1E-5 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4188 304d1f977356e71cf422c49830f9c05b 574 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 1.1E-5 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_5306 2aa337c31819517f16b87db62c4a7035 170 Gene3D G3DSA:3.40.630.30 1 170 5.4E-43 T 14-10-2018 MC28_5306 2aa337c31819517f16b87db62c4a7035 170 SUPERFAMILY SSF55729 6 168 4.82E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_5306 2aa337c31819517f16b87db62c4a7035 170 Pfam PF00583 Acetyltransferase (GNAT) family 37 140 6.0E-19 T 14-10-2018 IPR000182 GNAT domain MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 SUPERFAMILY SSF57716 36 71 3.42E-11 T 14-10-2018 MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 SMART SM00994 35 74 6.2E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 SUPERFAMILY SSF52540 84 420 7.92E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 27 431 1.3E-212 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 Gene3D G3DSA:1.10.8.60 335 441 7.1E-37 T 14-10-2018 MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 Gene3D G3DSA:3.40.50.300 78 334 1.8E-106 T 14-10-2018 MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 134 330 4.7E-51 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 SMART SM01086 336 430 3.8E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 336 414 1.2E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 Gene3D G3DSA:3.30.50.30 27 75 1.9E-21 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 SMART SM00382 133 294 4.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 27 434 53.574 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 MC28_3764 a2bbe856bdfb2432771ece40a9999e5f 444 Pfam PF06689 ClpX C4-type zinc finger 37 73 5.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 SUPERFAMILY SSF51735 7 259 8.47E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 Gene3D G3DSA:3.40.50.720 1 259 2.4E-73 T 14-10-2018 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 258 3.2E-58 T 14-10-2018 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 260 2.9E-121 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 107 127 1.1E-61 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 237 256 1.1E-61 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 87 104 1.1E-61 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 1.1E-61 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 230 1.1E-61 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 MC28_1574 0d136272be7eaad0c9baeda9a8677093 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 172 195 1.1E-61 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 MC28_3386 f6f7a6679d498e44ea07a079ed021097 183 SUPERFAMILY SSF55729 9 182 1.14E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3386 f6f7a6679d498e44ea07a079ed021097 183 Pfam PF13302 Acetyltransferase (GNAT) domain 16 156 1.8E-17 T 14-10-2018 IPR000182 GNAT domain MC28_3386 f6f7a6679d498e44ea07a079ed021097 183 Gene3D G3DSA:3.40.630.30 6 182 3.0E-37 T 14-10-2018 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 SUPERFAMILY SSF81624 2 139 2.22E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 44.435 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 SMART SM00898 2 118 4.7E-51 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 224 2.6E-30 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 Gene3D G3DSA:3.20.190.10 2 131 7.5E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 Pfam PF06827 Zinc finger found in FPG and IleRS 246 275 2.4E-10 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 SMART SM01232 134 226 2.8E-45 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 SUPERFAMILY SSF57716 222 274 9.78E-18 T 14-10-2018 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 8.7E-108 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 Gene3D G3DSA:1.10.8.50 136 275 1.6E-49 T 14-10-2018 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 SUPERFAMILY SSF46946 134 223 1.96E-29 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 MC28_3864 ec7d381eca981a579bc4f29e6a728536 276 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 4.0E-34 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 Gene3D G3DSA:3.30.70.260 344 415 1.1E-146 T 14-10-2018 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 SUPERFAMILY SSF55347 137 302 1.24E-52 T 14-10-2018 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 Gene3D G3DSA:3.40.50.720 4 336 1.1E-146 T 14-10-2018 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 1.3E-22 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 PIRSF PIRSF000098 1 429 3.9E-167 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 SUPERFAMILY SSF55021 348 418 1.78E-10 T 14-10-2018 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 355 397 0.002 T 14-10-2018 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 Pfam PF00742 Homoserine dehydrogenase 137 315 2.8E-65 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 Gene3D G3DSA:3.30.360.10 136 343 1.1E-146 T 14-10-2018 MC28_4637 748f3332f13c5dcabcb16300a7037964 431 SUPERFAMILY SSF51735 1 158 4.53E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4637 748f3332f13c5dcabcb16300a7037964 431 Pfam PF01842 ACT domain 351 404 2.9E-8 T 14-10-2018 IPR002912 ACT domain MC28_0284 a198fb7fa0f421aca32286a507581c44 67 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 43 63 7.1E-8 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_0284 a198fb7fa0f421aca32286a507581c44 67 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 41 62 7.9E-11 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_1352 37d1fb6c5424d038cb656b7c5828a250 143 SUPERFAMILY SSF51735 2 88 3.66E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1352 37d1fb6c5424d038cb656b7c5828a250 143 Gene3D G3DSA:3.40.50.720 1 113 9.4E-30 T 14-10-2018 MC28_1352 37d1fb6c5424d038cb656b7c5828a250 143 Pfam PF13241 Putative NAD(P)-binding 2 97 7.7E-21 T 14-10-2018 MC28_1352 37d1fb6c5424d038cb656b7c5828a250 143 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 138 7.6E-25 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 MC28_1352 37d1fb6c5424d038cb656b7c5828a250 143 SUPERFAMILY SSF75615 92 132 5.89E-5 T 14-10-2018 MC28_E051 a753620589bb16408471a49b926a1c1f 508 Gene3D G3DSA:2.80.10.50 228 361 9.3E-26 T 14-10-2018 MC28_E051 a753620589bb16408471a49b926a1c1f 508 SMART SM00458 221 356 4.7E-6 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_E051 a753620589bb16408471a49b926a1c1f 508 SMART SM00458 375 505 5.0E-4 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_E051 a753620589bb16408471a49b926a1c1f 508 Pfam PF01338 Bacillus thuringiensis toxin 2 228 1.0E-85 T 14-10-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 MC28_E051 a753620589bb16408471a49b926a1c1f 508 ProDom PD009844 CYTOLYTIC TOXIN DELTA-ENDOTOXIN SPORULATION PLASMID TYPE-1AA TOCIN 3D-STRUCTURE CRYET29 TYPE-1BA 61 226 6.0E-66 T 14-10-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 MC28_E051 a753620589bb16408471a49b926a1c1f 508 Gene3D G3DSA:3.40.198.10 19 227 1.0E-73 T 14-10-2018 IPR035918 Delta-endotoxin CytB-like superfamily MC28_E051 a753620589bb16408471a49b926a1c1f 508 SUPERFAMILY SSF50370 222 356 2.93E-25 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_E051 a753620589bb16408471a49b926a1c1f 508 Gene3D G3DSA:2.80.10.50 362 508 6.2E-30 T 14-10-2018 MC28_E051 a753620589bb16408471a49b926a1c1f 508 SUPERFAMILY SSF50370 364 506 2.37E-24 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_E051 a753620589bb16408471a49b926a1c1f 508 SUPERFAMILY SSF55676 4 229 2.35E-66 T 14-10-2018 IPR035918 Delta-endotoxin CytB-like superfamily MC28_E051 a753620589bb16408471a49b926a1c1f 508 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 404 491 1.8E-8 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_E051 a753620589bb16408471a49b926a1c1f 508 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 255 342 5.4E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_G407 b3a55cb5238b39d052e87ed9fa34cdbb 582 Pfam PF13289 SIR2-like domain 128 244 8.7E-9 T 14-10-2018 IPR039444 SIR2-like domain MC28_G407 b3a55cb5238b39d052e87ed9fa34cdbb 582 SUPERFAMILY SSF52467 7 217 8.88E-8 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_G407 b3a55cb5238b39d052e87ed9fa34cdbb 582 Gene3D G3DSA:3.40.50.1220 94 155 3.0E-5 T 14-10-2018 MC28_0577 0bc6153bc0118f66f98188f24034d39c 183 Gene3D G3DSA:3.40.50.1240 16 179 5.1E-9 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_0577 0bc6153bc0118f66f98188f24034d39c 183 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 34 171 9.2E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_0577 0bc6153bc0118f66f98188f24034d39c 183 SUPERFAMILY SSF53254 35 172 1.71E-16 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_2342 8ae081c647b9bed415ed25bfa5b04e3c 266 Pfam PF07690 Major Facilitator Superfamily 27 262 6.2E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2342 8ae081c647b9bed415ed25bfa5b04e3c 266 Gene3D G3DSA:1.20.1250.20 25 263 4.0E-30 T 14-10-2018 MC28_2342 8ae081c647b9bed415ed25bfa5b04e3c 266 SUPERFAMILY SSF103473 25 258 8.63E-35 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 877 942 3.2E-5 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 SUPERFAMILY SSF49299 724 841 6.15E-17 T 14-10-2018 IPR035986 PKD domain superfamily MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 SUPERFAMILY SSF89260 846 955 2.09E-30 T 14-10-2018 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 Gene3D G3DSA:3.30.980.50 646 755 7.4E-48 T 14-10-2018 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 Pfam PF01752 Collagenase 290 624 4.6E-81 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 Gene3D G3DSA:2.60.120.380 843 956 4.6E-24 T 14-10-2018 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 Gene3D G3DSA:1.10.1740.190 364 507 5.1E-59 T 14-10-2018 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 Gene3D G3DSA:1.10.390.20 508 645 6.2E-56 T 14-10-2018 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 437 451 2.1E-29 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 517 532 2.1E-29 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 454 470 2.1E-29 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 151 169 2.1E-29 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 491 509 2.1E-29 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 Pfam PF00801 PKD domain 784 831 3.6E-10 T 14-10-2018 IPR000601 PKD domain MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 Gene3D G3DSA:2.60.40.10 756 842 3.1E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 SMART SM00089 762 844 1.4E-15 T 14-10-2018 IPR022409 PKD/Chitinase domain MC28_5277 c4a50038bfbed047d65d23556fd88cea 956 Pfam PF08453 Peptidase family M9 N-terminal 85 266 3.3E-52 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 5.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 5.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 5.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 SUPERFAMILY SSF51735 8 256 3.66E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 7.8E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.8E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.8E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 7.8E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 7.8E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 7.8E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 Gene3D G3DSA:3.40.50.720 4 256 1.5E-83 T 14-10-2018 MC28_2343 7dea551e0486db5deb3efb6c73a2a274 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 2.6E-59 T 14-10-2018 MC28_E074 ada482df81e3a7e596bff039563441b2 710 Gene3D G3DSA:2.60.120.260 334 702 4.4E-107 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E074 ada482df81e3a7e596bff039563441b2 710 SUPERFAMILY SSF51096 328 537 1.27E-44 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_E074 ada482df81e3a7e596bff039563441b2 710 Gene3D G3DSA:2.100.10.10 339 535 4.4E-107 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_E074 ada482df81e3a7e596bff039563441b2 710 SUPERFAMILY SSF49785 538 701 1.36E-37 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E074 ada482df81e3a7e596bff039563441b2 710 SUPERFAMILY SSF56849 62 325 1.96E-60 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E074 ada482df81e3a7e596bff039563441b2 710 Pfam PF03944 delta endotoxin 547 701 2.4E-37 T 14-10-2018 IPR005638 Pesticidal crystal protein, C-terminal GO:0090729 MC28_E074 ada482df81e3a7e596bff039563441b2 710 Gene3D G3DSA:1.20.190.10 86 326 2.5E-56 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E074 ada482df81e3a7e596bff039563441b2 710 Pfam PF03945 delta endotoxin, N-terminal domain 164 325 8.6E-10 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_E074 ada482df81e3a7e596bff039563441b2 710 Pfam PF00555 delta endotoxin 333 537 2.4E-21 T 14-10-2018 IPR001178 Pesticidal crystal protein, central domain GO:0005102|GO:0009405 MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 356 4.3E-124 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 100 1.3E-21 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 Gene3D G3DSA:3.40.430.10 137 362 4.9E-77 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 356 1.7E-68 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 Gene3D G3DSA:3.40.140.10 1 136 3.1E-45 T 14-10-2018 MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 PIRSF PIRSF006769 1 362 4.8E-134 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 SUPERFAMILY SSF53597 145 359 1.07E-61 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 SUPERFAMILY SSF53927 4 143 6.42E-46 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 MC28_2526 3bd71d6abbea4b317ec489d0a76b78e8 367 Pfam PF01872 RibD C-terminal domain 148 354 3.8E-55 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 MC28_F233 c664d5ea770955d23dc13e0e05dcffae 314 SUPERFAMILY SSF51182 1 311 1.82E-103 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_F233 c664d5ea770955d23dc13e0e05dcffae 314 Gene3D G3DSA:2.60.120.10 227 314 4.4E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_F233 c664d5ea770955d23dc13e0e05dcffae 314 Gene3D G3DSA:2.60.120.10 1 225 1.5E-93 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_F233 c664d5ea770955d23dc13e0e05dcffae 314 PIRSF PIRSF036894 2 314 8.9E-132 T 14-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 MC28_F233 c664d5ea770955d23dc13e0e05dcffae 314 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 5 100 4.2E-34 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 MC28_F233 c664d5ea770955d23dc13e0e05dcffae 314 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 99 312 1.4E-52 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 MC28_F233 c664d5ea770955d23dc13e0e05dcffae 314 Pfam PF01238 Phosphomannose isomerase type I 7 195 2.7E-39 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 MC28_1937 0a09348bdee41e131f6d52e623260231 308 Gene3D G3DSA:3.90.180.10 8 305 2.2E-93 T 14-10-2018 MC28_1937 0a09348bdee41e131f6d52e623260231 308 SUPERFAMILY SSF51735 117 244 4.85E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1937 0a09348bdee41e131f6d52e623260231 308 SMART SM00829 10 305 1.6E-27 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_1937 0a09348bdee41e131f6d52e623260231 308 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 1.4E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_1937 0a09348bdee41e131f6d52e623260231 308 Gene3D G3DSA:3.40.50.720 125 274 2.2E-93 T 14-10-2018 MC28_1937 0a09348bdee41e131f6d52e623260231 308 Pfam PF13602 Zinc-binding dehydrogenase 187 305 1.4E-23 T 14-10-2018 MC28_1937 0a09348bdee41e131f6d52e623260231 308 SUPERFAMILY SSF50129 1 144 2.43E-36 T 14-10-2018 IPR011032 GroES-like superfamily MC28_3271 77b2534bdade63e742af6e9161c1fabf 294 Pfam PF03466 LysR substrate binding domain 99 289 1.6E-31 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_3271 77b2534bdade63e742af6e9161c1fabf 294 Gene3D G3DSA:3.40.190.290 91 290 4.1E-63 T 14-10-2018 MC28_3271 77b2534bdade63e742af6e9161c1fabf 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_3271 77b2534bdade63e742af6e9161c1fabf 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_3271 77b2534bdade63e742af6e9161c1fabf 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_3271 77b2534bdade63e742af6e9161c1fabf 294 SUPERFAMILY SSF46785 8 120 6.01E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3271 77b2534bdade63e742af6e9161c1fabf 294 SUPERFAMILY SSF53850 100 292 4.71E-27 T 14-10-2018 MC28_3271 77b2534bdade63e742af6e9161c1fabf 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 1.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_3271 77b2534bdade63e742af6e9161c1fabf 294 Gene3D G3DSA:1.10.10.10 4 90 4.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3012 0e63eda33d353f946a38588f66593ab2 63 Pfam PF13128 Protein of unknown function (DUF3954) 14 55 2.3E-14 T 14-10-2018 IPR025017 Protein of unknown function DUF3954 MC28_D113 c90ab92475129663fde375661751ee96 120 Pfam PF14208 Domain of unknown function (DUF4320) 15 104 1.2E-5 T 14-10-2018 IPR025469 Protein of unknown function DUF4320 MC28_D113 c90ab92475129663fde375661751ee96 120 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 7 120 2.0E-40 T 14-10-2018 MC28_4797 d487db816b58322cd4d5d1054b8b0dba 367 SUPERFAMILY SSF88723 167 295 1.74E-25 T 14-10-2018 IPR029060 PIN-like domain superfamily MC28_4797 d487db816b58322cd4d5d1054b8b0dba 367 Gene3D G3DSA:3.40.50.1010 163 298 6.9E-54 T 14-10-2018 MC28_4797 d487db816b58322cd4d5d1054b8b0dba 367 SMART SM00670 167 274 1.0E-13 T 14-10-2018 IPR002716 PIN domain MC28_1980 3b9f06b56e40f1a7dfb5ef3867532612 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 81 5.3E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MC28_1980 3b9f06b56e40f1a7dfb5ef3867532612 106 SUPERFAMILY SSF54292 11 90 1.04E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 MC28_1980 3b9f06b56e40f1a7dfb5ef3867532612 106 Gene3D G3DSA:3.10.20.30 5 92 8.1E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_G042 7a7d038b747630a98926c59a89404ed3 186 Gene3D G3DSA:3.40.630.30 2 176 3.9E-42 T 14-10-2018 MC28_G042 7a7d038b747630a98926c59a89404ed3 186 Pfam PF13420 Acetyltransferase (GNAT) domain 11 160 1.1E-13 T 14-10-2018 MC28_G042 7a7d038b747630a98926c59a89404ed3 186 SUPERFAMILY SSF55729 7 163 6.64E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_G042 7a7d038b747630a98926c59a89404ed3 186 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 8 162 5.5E-38 T 14-10-2018 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 528 9.9E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 542 9.9E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 587 9.9E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 568 9.9E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 SUPERFAMILY SSF158472 197 244 2.22E-9 T 14-10-2018 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 SUPERFAMILY SSF47384 348 432 5.49E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 Pfam PF00672 HAMP domain 197 243 2.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 588 5.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 Gene3D G3DSA:3.30.565.10 434 590 2.2E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 Pfam PF00512 His Kinase A (phospho-acceptor) domain 364 431 1.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 SUPERFAMILY SSF55874 420 587 2.49E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 SMART SM00304 196 248 4.7E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 Gene3D G3DSA:3.30.450.20 246 355 7.1E-18 T 14-10-2018 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 SMART SM00091 255 320 7.0E-5 T 14-10-2018 IPR000014 PAS domain MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 SUPERFAMILY SSF55785 243 356 1.42E-8 T 14-10-2018 IPR035965 PAS domain superfamily MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 SMART SM00388 364 431 5.4E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 Gene3D G3DSA:1.10.8.500 195 245 3.2E-11 T 14-10-2018 MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 SMART SM00387 477 590 5.4E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0712 c4330736812e79a5a6aa07a44ad4e07d 591 Gene3D G3DSA:1.10.287.130 356 433 1.4E-25 T 14-10-2018 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 SUPERFAMILY SSF51735 18 173 4.41E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 Gene3D G3DSA:3.90.110.10 176 344 2.1E-57 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 PRINTS PR00086 L-lactate dehydrogenase signature 171 189 2.2E-44 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 PRINTS PR00086 L-lactate dehydrogenase signature 60 84 2.2E-44 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 PRINTS PR00086 L-lactate dehydrogenase signature 201 214 2.2E-44 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 PRINTS PR00086 L-lactate dehydrogenase signature 35 59 2.2E-44 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 PRINTS PR00086 L-lactate dehydrogenase signature 147 167 2.2E-44 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 35 173 9.4E-43 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 38 336 3.7E-119 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 SUPERFAMILY SSF56327 174 342 8.5E-55 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 33 343 44.624 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 Gene3D G3DSA:3.40.50.720 29 175 2.6E-56 T 14-10-2018 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 203 209 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 PIRSF PIRSF000102 30 344 1.1E-111 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4265 99723de3ca4cfb2113b7d18ed1d8a184 344 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 176 340 8.1E-26 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 MC28_2050 bd05e20be0671f884b5fbc6ee24efdc4 215 Gene3D G3DSA:1.10.10.10 119 215 2.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2050 bd05e20be0671f884b5fbc6ee24efdc4 215 Pfam PF00072 Response regulator receiver domain 3 111 2.8E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2050 bd05e20be0671f884b5fbc6ee24efdc4 215 SMART SM00448 1 111 1.0E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2050 bd05e20be0671f884b5fbc6ee24efdc4 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 210 2.2E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2050 bd05e20be0671f884b5fbc6ee24efdc4 215 SUPERFAMILY SSF52172 1 169 1.51E-37 T 14-10-2018 IPR011006 CheY-like superfamily MC28_2050 bd05e20be0671f884b5fbc6ee24efdc4 215 SMART SM00862 139 210 1.6E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2050 bd05e20be0671f884b5fbc6ee24efdc4 215 Gene3D G3DSA:3.40.50.2300 1 118 2.1E-35 T 14-10-2018 MC28_E180 37e9f8cd08e77cf3989d371c8e3ca89a 363 Pfam PF00877 NlpC/P60 family 262 363 1.6E-17 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_E180 37e9f8cd08e77cf3989d371c8e3ca89a 363 Gene3D G3DSA:3.90.1720.10 227 363 2.7E-27 T 14-10-2018 MC28_E180 37e9f8cd08e77cf3989d371c8e3ca89a 363 Gene3D G3DSA:1.10.530.10 58 226 1.5E-53 T 14-10-2018 MC28_E180 37e9f8cd08e77cf3989d371c8e3ca89a 363 Pfam PF13702 Lysozyme-like 61 227 5.3E-47 T 14-10-2018 MC28_E180 37e9f8cd08e77cf3989d371c8e3ca89a 363 SUPERFAMILY SSF54001 244 363 1.86E-23 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_E180 37e9f8cd08e77cf3989d371c8e3ca89a 363 SUPERFAMILY SSF53955 67 177 9.56E-11 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_4830 4d3f43dba4db11a4460bfa8f5c071032 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4830 4d3f43dba4db11a4460bfa8f5c071032 66 SUPERFAMILY SSF46561 1 64 9.42E-24 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4830 4d3f43dba4db11a4460bfa8f5c071032 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.193 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4830 4d3f43dba4db11a4460bfa8f5c071032 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.5E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4830 4d3f43dba4db11a4460bfa8f5c071032 66 Gene3D G3DSA:1.10.287.310 1 66 4.3E-30 T 14-10-2018 MC28_4830 4d3f43dba4db11a4460bfa8f5c071032 66 Pfam PF00831 Ribosomal L29 protein 4 60 2.6E-26 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4755 7c5498c1e71a5ee27587f422c6572793 191 SUPERFAMILY SSF110455 7 120 2.51E-36 T 14-10-2018 MC28_4755 7c5498c1e71a5ee27587f422c6572793 191 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 8 181 1.1E-64 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 MC28_4755 7c5498c1e71a5ee27587f422c6572793 191 Gene3D G3DSA:3.40.1360.20 6 125 7.2E-26 T 14-10-2018 MC28_4755 7c5498c1e71a5ee27587f422c6572793 191 Hamap MF_01469 Ribonuclease M5 [rnmV]. 9 184 32.955 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 MC28_4755 7c5498c1e71a5ee27587f422c6572793 191 Pfam PF13662 Toprim domain 10 76 2.6E-7 T 14-10-2018 IPR006171 TOPRIM domain MC28_4755 7c5498c1e71a5ee27587f422c6572793 191 SMART SM00493 10 83 2.6E-7 T 14-10-2018 IPR006171 TOPRIM domain MC28_4755 7c5498c1e71a5ee27587f422c6572793 191 Pfam PF13331 Domain of unknown function (DUF4093) 99 181 2.3E-27 T 14-10-2018 IPR025156 Ribonuclease M5, C-terminal domain MC28_3284 c815ca4b376491b5bebf64cb3300e7e9 519 Gene3D G3DSA:3.30.420.150 123 313 9.5E-54 T 14-10-2018 MC28_3284 c815ca4b376491b5bebf64cb3300e7e9 519 SUPERFAMILY SSF109604 326 517 1.19E-23 T 14-10-2018 MC28_3284 c815ca4b376491b5bebf64cb3300e7e9 519 Pfam PF02541 Ppx/GppA phosphatase family 32 317 9.7E-51 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 MC28_3284 c815ca4b376491b5bebf64cb3300e7e9 519 SUPERFAMILY SSF53067 142 317 1.27E-40 T 14-10-2018 MC28_3284 c815ca4b376491b5bebf64cb3300e7e9 519 SUPERFAMILY SSF53067 19 139 1.54E-28 T 14-10-2018 MC28_3284 c815ca4b376491b5bebf64cb3300e7e9 519 Gene3D G3DSA:1.10.3210.10 350 519 2.8E-25 T 14-10-2018 MC28_3284 c815ca4b376491b5bebf64cb3300e7e9 519 Gene3D G3DSA:3.30.420.40 5 122 1.1E-23 T 14-10-2018 MC28_2532 1fa107825ced9c8bfaacc4aa24203325 404 Pfam PF07690 Major Facilitator Superfamily 24 334 3.0E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2532 1fa107825ced9c8bfaacc4aa24203325 404 SUPERFAMILY SSF103473 11 395 6.54E-61 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2532 1fa107825ced9c8bfaacc4aa24203325 404 PRINTS PR01035 Tetracycline resistance protein signature 26 42 2.4E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_2532 1fa107825ced9c8bfaacc4aa24203325 404 PRINTS PR01035 Tetracycline resistance protein signature 174 194 2.4E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_2532 1fa107825ced9c8bfaacc4aa24203325 404 PRINTS PR01035 Tetracycline resistance protein signature 56 75 2.4E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_2532 1fa107825ced9c8bfaacc4aa24203325 404 PRINTS PR01035 Tetracycline resistance protein signature 114 135 2.4E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_2532 1fa107825ced9c8bfaacc4aa24203325 404 PRINTS PR01035 Tetracycline resistance protein signature 378 397 2.4E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_2532 1fa107825ced9c8bfaacc4aa24203325 404 Gene3D G3DSA:1.20.1250.20 9 396 5.3E-49 T 14-10-2018 MC28_3468 bb68840d341ecf83687f6cc2100743c9 280 Pfam PF01728 FtsJ-like methyltransferase 62 244 2.5E-18 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 MC28_3468 bb68840d341ecf83687f6cc2100743c9 280 Gene3D G3DSA:3.40.50.150 65 280 3.8E-84 T 14-10-2018 MC28_3468 bb68840d341ecf83687f6cc2100743c9 280 SUPERFAMILY SSF55174 5 71 4.86E-13 T 14-10-2018 MC28_3468 bb68840d341ecf83687f6cc2100743c9 280 SMART SM00363 6 71 2.3E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3468 bb68840d341ecf83687f6cc2100743c9 280 PIRSF PIRSF005578 1 270 4.0E-104 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 MC28_3468 bb68840d341ecf83687f6cc2100743c9 280 Gene3D G3DSA:3.10.290.10 2 64 1.3E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_3468 bb68840d341ecf83687f6cc2100743c9 280 SUPERFAMILY SSF53335 55 246 2.24E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3468 bb68840d341ecf83687f6cc2100743c9 280 Pfam PF01479 S4 domain 6 48 1.6E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3468 bb68840d341ecf83687f6cc2100743c9 280 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 4.4E-94 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 MC28_0743 2a0b472b455589dd886837906b18ebec 492 Gene3D G3DSA:3.40.50.300 12 235 3.9E-10 T 14-10-2018 MC28_0743 2a0b472b455589dd886837906b18ebec 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 2 492 1.8E-226 T 14-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 MC28_0743 2a0b472b455589dd886837906b18ebec 492 PIRSF PIRSF007466 1 492 8.9E-274 T 14-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 MC28_0743 2a0b472b455589dd886837906b18ebec 492 SUPERFAMILY SSF52540 21 236 3.32E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0743 2a0b472b455589dd886837906b18ebec 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 7.9E-263 T 14-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 Gene3D G3DSA:3.40.50.10990 204 374 1.7E-78 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 Gene3D G3DSA:3.90.870.10 1 203 2.7E-90 T 14-10-2018 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 196 2.9E-81 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 196 2.0E-85 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 1 393 55.457 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 208 395 4.3E-81 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 PIRSF PIRSF001259 1 397 1.6E-188 T 14-10-2018 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 Pfam PF00925 GTP cyclohydrolase II 206 371 8.4E-77 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 202 397 42.149 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 SUPERFAMILY SSF142695 203 374 2.75E-74 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 201 38.809 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3404 d331f0da6948bc4af9f60bcd2c062637 397 SUPERFAMILY SSF55821 2 201 1.19E-85 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily MC28_3115 3d2bc31bf0a5062265c7fff714a25732 302 Pfam PF00849 RNA pseudouridylate synthase 89 242 4.7E-36 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3115 3d2bc31bf0a5062265c7fff714a25732 302 SUPERFAMILY SSF55174 16 102 7.06E-16 T 14-10-2018 MC28_3115 3d2bc31bf0a5062265c7fff714a25732 302 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 301 1.6E-107 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3115 3d2bc31bf0a5062265c7fff714a25732 302 Pfam PF01479 S4 domain 16 62 3.2E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3115 3d2bc31bf0a5062265c7fff714a25732 302 SMART SM00363 16 75 2.4E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3115 3d2bc31bf0a5062265c7fff714a25732 302 Gene3D G3DSA:3.30.2350.10 81 302 4.7E-77 T 14-10-2018 MC28_3115 3d2bc31bf0a5062265c7fff714a25732 302 SUPERFAMILY SSF55120 75 301 7.44E-80 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3115 3d2bc31bf0a5062265c7fff714a25732 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3115 3d2bc31bf0a5062265c7fff714a25732 302 Gene3D G3DSA:3.10.290.10 4 71 1.5E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_2386 a44c89f6edaca36c265ff3542dec7382 343 SUPERFAMILY SSF52317 2 169 1.51E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_2386 a44c89f6edaca36c265ff3542dec7382 343 SUPERFAMILY SSF141986 173 334 1.2E-27 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily MC28_2386 a44c89f6edaca36c265ff3542dec7382 343 PIRSF PIRSF028757 2 343 1.7E-64 T 14-10-2018 IPR003507 Peptidase family S66 MC28_2386 a44c89f6edaca36c265ff3542dec7382 343 Gene3D G3DSA:3.50.30.60 166 343 7.4E-64 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily MC28_2386 a44c89f6edaca36c265ff3542dec7382 343 Pfam PF02016 LD-carboxypeptidase 14 328 6.0E-70 T 14-10-2018 IPR003507 Peptidase family S66 MC28_2386 a44c89f6edaca36c265ff3542dec7382 343 Gene3D G3DSA:3.40.50.10740 1 165 1.3E-62 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal MC28_0423 c688c860de006afb93d4ab7ff6955148 215 Gene3D G3DSA:3.30.460.10 2 150 2.5E-51 T 14-10-2018 MC28_0423 c688c860de006afb93d4ab7ff6955148 215 Gene3D G3DSA:1.10.287.860 151 214 1.1E-28 T 14-10-2018 MC28_0423 c688c860de006afb93d4ab7ff6955148 215 Pfam PF04607 Region found in RelA / SpoT proteins 47 165 1.4E-37 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 MC28_0423 c688c860de006afb93d4ab7ff6955148 215 SMART SM00954 47 168 3.9E-38 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 MC28_0423 c688c860de006afb93d4ab7ff6955148 215 SUPERFAMILY SSF81301 7 201 9.48E-60 T 14-10-2018 MC28_1195 30fa065ff32ee5c2977faee2bbe28b8d 321 Gene3D G3DSA:3.40.1090.20 4 101 2.1E-22 T 14-10-2018 MC28_1195 30fa065ff32ee5c2977faee2bbe28b8d 321 SUPERFAMILY SSF52151 6 302 3.14E-45 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MC28_1195 30fa065ff32ee5c2977faee2bbe28b8d 321 Pfam PF01734 Patatin-like phospholipase 6 198 1.2E-31 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 MC28_4399 c2bc8ca73a88389f16ab575d73c99d57 130 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 5 115 7.7E-25 T 14-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV MC28_1459 917e949896dd98e9572be6680b7c8b19 442 SMART SM01091 346 422 1.3E-18 T 14-10-2018 IPR005170 Transporter-associated domain MC28_1459 917e949896dd98e9572be6680b7c8b19 442 SUPERFAMILY SSF54631 196 333 6.06E-32 T 14-10-2018 MC28_1459 917e949896dd98e9572be6680b7c8b19 442 SUPERFAMILY SSF56176 343 420 7.63E-13 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_1459 917e949896dd98e9572be6680b7c8b19 442 Gene3D G3DSA:3.30.465.10 340 420 3.8E-14 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 MC28_1459 917e949896dd98e9572be6680b7c8b19 442 Gene3D G3DSA:3.10.580.10 187 339 1.5E-50 T 14-10-2018 MC28_1459 917e949896dd98e9572be6680b7c8b19 442 Pfam PF03471 Transporter associated domain 347 420 3.1E-13 T 14-10-2018 IPR005170 Transporter-associated domain MC28_1459 917e949896dd98e9572be6680b7c8b19 442 Pfam PF00571 CBS domain 214 263 8.2E-8 T 14-10-2018 IPR000644 CBS domain MC28_1459 917e949896dd98e9572be6680b7c8b19 442 Pfam PF00571 CBS domain 281 330 9.2E-4 T 14-10-2018 IPR000644 CBS domain MC28_1459 917e949896dd98e9572be6680b7c8b19 442 Pfam PF01595 Domain of unknown function DUF21 2 193 3.4E-48 T 14-10-2018 IPR002550 CNNM, transmembrane domain MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1273 1345 7.06E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1634 1706 7.06E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1091 1157 7.65E-10 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1819 1885 7.06E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 1086 1171 1.3E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 900 993 2.1E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 1714 1808 6.4E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 1809 1903 1.3E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 809 899 8.4E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 1172 1265 1.1E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 1626 1713 1.0E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 721 808 9.6E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 994 1085 1.7E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 1360 1447 2.1E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 356 449 8.3E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1003 1066 2.79E-11 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 641 705 5.1E-10 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 457 524 5.1E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 910 979 8.63E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 541 632 1.4E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 1448 1538 2.7E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 450 540 3.2E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 1266 1359 1.9E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 1539 1625 6.6E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 Gene3D G3DSA:2.60.40.10 633 720 2.0E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 361 430 3.18E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 729 798 8.63E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1187 1254 9.42E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 822 886 4.32E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1453 1525 7.06E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1727 1791 2.31E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1546 1610 2.24E-9 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 1366 1429 2.47E-11 T 14-10-2018 MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 62 343 5.3E-22 T 14-10-2018 IPR026588 Choice-of-anchor A domain MC28_0144 778505a745a05441bf1e14b40eb46fd4 1971 SUPERFAMILY SSF49478 548 617 8.63E-9 T 14-10-2018 MC28_4858 d6a0203c579453198baed5f8c3eeb713 237 SMART SM00646 115 226 2.1E-30 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 MC28_4858 d6a0203c579453198baed5f8c3eeb713 237 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 40 228 6.9E-83 T 14-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 MC28_4858 d6a0203c579453198baed5f8c3eeb713 237 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 42 226 2.9E-46 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 MC28_4858 d6a0203c579453198baed5f8c3eeb713 237 Gene3D G3DSA:3.40.630.40 38 235 2.7E-53 T 14-10-2018 MC28_4858 d6a0203c579453198baed5f8c3eeb713 237 SUPERFAMILY SSF53187 40 231 1.07E-50 T 14-10-2018 MC28_G082 dd0f5ae40d5830bc0d3652e5b6fec65d 288 SUPERFAMILY SSF46785 5 110 2.8E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_G082 dd0f5ae40d5830bc0d3652e5b6fec65d 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_G082 dd0f5ae40d5830bc0d3652e5b6fec65d 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_G082 dd0f5ae40d5830bc0d3652e5b6fec65d 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_G082 dd0f5ae40d5830bc0d3652e5b6fec65d 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 61 5.3E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_G082 dd0f5ae40d5830bc0d3652e5b6fec65d 288 SUPERFAMILY SSF53850 82 272 1.81E-24 T 14-10-2018 MC28_G082 dd0f5ae40d5830bc0d3652e5b6fec65d 288 Gene3D G3DSA:1.10.10.10 1 86 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G082 dd0f5ae40d5830bc0d3652e5b6fec65d 288 Pfam PF03466 LysR substrate binding domain 90 282 2.5E-25 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_G082 dd0f5ae40d5830bc0d3652e5b6fec65d 288 Gene3D G3DSA:3.40.190.290 91 286 4.8E-29 T 14-10-2018 MC28_3599 6ff2a6518abf232a8118ca44f3386b0a 147 Gene3D G3DSA:1.10.10.410 91 147 3.7E-23 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal MC28_3599 6ff2a6518abf232a8118ca44f3386b0a 147 SUPERFAMILY SSF89095 1 146 3.45E-42 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 MC28_3599 6ff2a6518abf232a8118ca44f3386b0a 147 Gene3D G3DSA:1.10.1510.10 1 90 3.1E-29 T 14-10-2018 MC28_3599 6ff2a6518abf232a8118ca44f3386b0a 147 Pfam PF09424 Yqey-like protein 6 146 1.5E-53 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 MC28_G327 abf5121f0ea856198d2b2ef7fe9514db 273 SUPERFAMILY SSF56281 24 229 1.74E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_G327 abf5121f0ea856198d2b2ef7fe9514db 273 SMART SM00849 25 207 6.9E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_G327 abf5121f0ea856198d2b2ef7fe9514db 273 Gene3D G3DSA:3.60.15.10 10 241 6.6E-23 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_4984 c045f4ed3b1ab121c5d155d16e16adee 152 Pfam PF04266 ASCH domain 25 144 3.7E-28 T 14-10-2018 IPR007374 ASCH domain MC28_4984 c045f4ed3b1ab121c5d155d16e16adee 152 PIRSF PIRSF021320 1 148 3.2E-54 T 14-10-2018 IPR009326 Protein of unknown function DUF984 MC28_4984 c045f4ed3b1ab121c5d155d16e16adee 152 SMART SM01022 25 145 5.9E-42 T 14-10-2018 IPR007374 ASCH domain MC28_4984 c045f4ed3b1ab121c5d155d16e16adee 152 Gene3D G3DSA:3.10.400.10 2 151 1.9E-58 T 14-10-2018 MC28_4984 c045f4ed3b1ab121c5d155d16e16adee 152 SUPERFAMILY SSF88697 5 145 1.37E-51 T 14-10-2018 IPR015947 PUA-like superfamily MC28_0636 f32357218c6319a99cec6a00e2795622 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 4 330 45.349 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_0636 f32357218c6319a99cec6a00e2795622 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 3.7E-78 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_0636 f32357218c6319a99cec6a00e2795622 338 Gene3D G3DSA:3.40.50.720 3 183 1.0E-78 T 14-10-2018 MC28_0636 f32357218c6319a99cec6a00e2795622 338 PIRSF PIRSF000116 2 208 3.9E-40 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_0636 f32357218c6319a99cec6a00e2795622 338 PIRSF PIRSF000116 203 334 3.8E-13 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_0636 f32357218c6319a99cec6a00e2795622 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 17 328 2.5E-141 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_0636 f32357218c6319a99cec6a00e2795622 338 Gene3D G3DSA:1.10.3730.40 184 336 3.8E-69 T 14-10-2018 MC28_0636 f32357218c6319a99cec6a00e2795622 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 327 1.3E-65 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_0636 f32357218c6319a99cec6a00e2795622 338 SUPERFAMILY SSF48179 185 330 1.25E-69 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_0636 f32357218c6319a99cec6a00e2795622 338 SUPERFAMILY SSF51735 5 184 3.27E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0684 8ea0835a34ab422be78d2193d766b405 402 Gene3D G3DSA:3.40.50.80 261 400 1.5E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MC28_0684 8ea0835a34ab422be78d2193d766b405 402 Pfam PF00175 Oxidoreductase NAD-binding domain 269 376 4.4E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 MC28_0684 8ea0835a34ab422be78d2193d766b405 402 Hamap MF_01252 Flavohemoprotein [hmp]. 1 401 58.721 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 MC28_0684 8ea0835a34ab422be78d2193d766b405 402 Pfam PF00042 Globin 7 103 2.0E-10 T 14-10-2018 IPR000971 Globin GO:0020037 MC28_0684 8ea0835a34ab422be78d2193d766b405 402 SUPERFAMILY SSF52343 262 397 3.4E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MC28_0684 8ea0835a34ab422be78d2193d766b405 402 SUPERFAMILY SSF46458 2 141 1.66E-41 T 14-10-2018 IPR009050 Globin-like superfamily MC28_0684 8ea0835a34ab422be78d2193d766b405 402 SUPERFAMILY SSF63380 149 259 5.11E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel MC28_0684 8ea0835a34ab422be78d2193d766b405 402 Gene3D G3DSA:1.10.490.10 1 143 2.8E-55 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 MC28_0684 8ea0835a34ab422be78d2193d766b405 402 Gene3D G3DSA:2.40.30.10 149 258 3.8E-38 T 14-10-2018 MC28_0684 8ea0835a34ab422be78d2193d766b405 402 Pfam PF00970 Oxidoreductase FAD-binding domain 156 257 2.4E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 MC28_0684 8ea0835a34ab422be78d2193d766b405 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 363 371 1.5E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 MC28_0684 8ea0835a34ab422be78d2193d766b405 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 268 287 1.5E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 MC28_0684 8ea0835a34ab422be78d2193d766b405 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.5E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 MC28_3565 107e8f541b665848030e0fc5b028769d 685 Gene3D G3DSA:1.10.10.1230 62 164 2.0E-225 T 14-10-2018 MC28_3565 107e8f541b665848030e0fc5b028769d 685 Pfam PF03717 Penicillin-binding Protein dimerisation domain 35 274 3.0E-37 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_3565 107e8f541b665848030e0fc5b028769d 685 SUPERFAMILY SSF56601 289 661 2.21E-68 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_3565 107e8f541b665848030e0fc5b028769d 685 Gene3D G3DSA:3.40.710.10 288 648 2.0E-225 T 14-10-2018 MC28_3565 107e8f541b665848030e0fc5b028769d 685 Gene3D G3DSA:3.90.1310.30 37 542 2.0E-225 T 14-10-2018 MC28_3565 107e8f541b665848030e0fc5b028769d 685 Pfam PF00905 Penicillin binding protein transpeptidase domain 319 654 2.9E-67 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_3565 107e8f541b665848030e0fc5b028769d 685 SUPERFAMILY SSF56519 31 288 5.1E-36 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_0553 6e2484389b14ea4bdbf1a3de84d7a21b 585 SUPERFAMILY SSF161098 313 570 1.96E-33 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0553 6e2484389b14ea4bdbf1a3de84d7a21b 585 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 397 574 4.6E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0553 6e2484389b14ea4bdbf1a3de84d7a21b 585 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 284 7.1E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0553 6e2484389b14ea4bdbf1a3de84d7a21b 585 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 25 584 1.5E-250 T 14-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative MC28_0553 6e2484389b14ea4bdbf1a3de84d7a21b 585 Gene3D G3DSA:1.10.3720.10 313 576 9.6E-33 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0553 6e2484389b14ea4bdbf1a3de84d7a21b 585 Gene3D G3DSA:1.10.3720.10 28 293 5.3E-56 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0553 6e2484389b14ea4bdbf1a3de84d7a21b 585 SUPERFAMILY SSF161098 23 289 3.64E-50 T 14-10-2018 IPR035906 MetI-like superfamily MC28_F127 57d05f8a0d42c49577668c838a8eaff1 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 169 2.9E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_F127 57d05f8a0d42c49577668c838a8eaff1 181 Gene3D G3DSA:1.10.10.10 95 173 1.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F127 57d05f8a0d42c49577668c838a8eaff1 181 SUPERFAMILY SSF88946 12 94 1.37E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_F127 57d05f8a0d42c49577668c838a8eaff1 181 Pfam PF08281 Sigma-70, region 4 116 166 2.9E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_F127 57d05f8a0d42c49577668c838a8eaff1 181 SUPERFAMILY SSF88659 104 171 5.89E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_F127 57d05f8a0d42c49577668c838a8eaff1 181 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 41 72 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_F127 57d05f8a0d42c49577668c838a8eaff1 181 Gene3D G3DSA:1.10.1740.10 3 82 7.6E-20 T 14-10-2018 MC28_F127 57d05f8a0d42c49577668c838a8eaff1 181 Pfam PF04542 Sigma-70 region 2 20 83 2.3E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_2044 dfcbd32aa257956b2af0a2e048f3d39d 166 Gene3D G3DSA:1.10.530.10 13 165 9.7E-6 T 14-10-2018 MC28_2044 dfcbd32aa257956b2af0a2e048f3d39d 166 SUPERFAMILY SSF53955 39 135 2.22E-10 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_F076 0b865be5cc22a710fc742acd08840edf 255 Gene3D G3DSA:3.30.40.60 6 105 8.1E-9 T 14-10-2018 MC28_F076 0b865be5cc22a710fc742acd08840edf 255 SMART SM00507 37 94 4.6E-4 T 14-10-2018 IPR003615 HNH nuclease MC28_F076 0b865be5cc22a710fc742acd08840edf 255 Pfam PF01844 HNH endonuclease 54 98 1.8E-4 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 MC28_1183 ec12433564170cc75f7e9874a28d508e 174 SUPERFAMILY SSF55729 4 153 1.26E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1183 ec12433564170cc75f7e9874a28d508e 174 Pfam PF00583 Acetyltransferase (GNAT) family 42 143 4.6E-10 T 14-10-2018 IPR000182 GNAT domain MC28_1183 ec12433564170cc75f7e9874a28d508e 174 Gene3D G3DSA:3.40.630.30 4 171 1.3E-32 T 14-10-2018 MC28_2271 a4ea4b405d4c98d52c1cbe3f71579e32 214 SUPERFAMILY SSF48371 38 212 1.01E-36 T 14-10-2018 IPR016024 Armadillo-type fold MC28_2271 a4ea4b405d4c98d52c1cbe3f71579e32 214 Gene3D G3DSA:1.25.40.290 91 212 1.5E-33 T 14-10-2018 MC28_2271 a4ea4b405d4c98d52c1cbe3f71579e32 214 Pfam PF08713 DNA alkylation repair enzyme 102 186 3.9E-8 T 14-10-2018 IPR014825 DNA alkylation repair enzyme MC28_2770 6c9c4e81b21620f67975951a59dc709b 411 SUPERFAMILY SSF50447 14 95 1.69E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_2770 6c9c4e81b21620f67975951a59dc709b 411 Gene3D G3DSA:2.40.30.130 12 96 5.8E-24 T 14-10-2018 MC28_2770 6c9c4e81b21620f67975951a59dc709b 411 SMART SM00863 192 234 4.7E-10 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 MC28_2770 6c9c4e81b21620f67975951a59dc709b 411 Pfam PF01411 tRNA synthetases class II (A) 27 92 9.5E-9 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 MC28_2770 6c9c4e81b21620f67975951a59dc709b 411 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 192 232 5.8E-9 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 MC28_2770 6c9c4e81b21620f67975951a59dc709b 411 Gene3D G3DSA:3.30.980.10 97 250 1.2E-41 T 14-10-2018 MC28_2770 6c9c4e81b21620f67975951a59dc709b 411 Pfam PF02272 DHHA1 domain 271 403 1.4E-11 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 MC28_2770 6c9c4e81b21620f67975951a59dc709b 411 SUPERFAMILY SSF55186 100 240 3.66E-35 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 MC28_2770 6c9c4e81b21620f67975951a59dc709b 411 Gene3D G3DSA:3.10.310.40 301 408 8.6E-12 T 14-10-2018 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Gene3D G3DSA:3.90.740.10 226 410 4.2E-282 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Pfam PF08264 Anticodon-binding domain of tRNA 652 766 4.3E-22 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Gene3D G3DSA:3.40.50.620 32 571 4.2E-282 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 SUPERFAMILY SSF50677 224 407 3.87E-55 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 412 603 4.4E-21 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Gene3D G3DSA:2.30.210.10 572 587 4.2E-282 T 14-10-2018 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 SUPERFAMILY SSF52374 2 625 2.5E-146 T 14-10-2018 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 SUPERFAMILY SSF47323 618 801 9.53E-44 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 801 23.297 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 1.2E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 1.2E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.2E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.2E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.2E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 1.2E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 1.2E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 801 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Gene3D G3DSA:1.10.730.10 599 740 5.3E-48 T 14-10-2018 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 399 1.4E-70 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Gene3D G3DSA:3.10.20.590 744 801 1.6E-18 T 14-10-2018 MC28_4019 f075c73f5594812bb8a6c6a1ec645655 802 Pfam PF09334 tRNA synthetases class I (M) 39 170 1.1E-16 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_2674 536a17c8adc3dc226440b24c7cb8a6bd 172 SUPERFAMILY SSF48295 3 54 1.73E-11 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 MC28_2674 536a17c8adc3dc226440b24c7cb8a6bd 172 SUPERFAMILY SSF46689 56 160 4.84E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2674 536a17c8adc3dc226440b24c7cb8a6bd 172 Pfam PF13518 Helix-turn-helix domain 63 116 6.5E-10 T 14-10-2018 MC28_2674 536a17c8adc3dc226440b24c7cb8a6bd 172 Pfam PF13518 Helix-turn-helix domain 8 55 3.5E-8 T 14-10-2018 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 Gene3D G3DSA:3.30.450.20 72 183 6.2E-35 T 14-10-2018 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 SMART SM00304 593 656 95.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 SMART SM00304 303 355 1.0E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 SUPERFAMILY SSF103190 98 190 1.57E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 1.2E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 540 1.2E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 SUPERFAMILY SSF58104 323 659 3.27E-72 T 14-10-2018 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 Gene3D G3DSA:1.10.287.950 360 659 1.4E-70 T 14-10-2018 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 SMART SM00283 384 659 1.1E-75 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 Pfam PF00672 HAMP domain 304 352 5.7E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 Gene3D G3DSA:1.10.8.500 302 355 6.0E-12 T 14-10-2018 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 Pfam PF02743 Cache domain 47 266 5.3E-30 T 14-10-2018 IPR033479 Double Cache domain 1 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 Gene3D G3DSA:3.30.450.20 61 274 6.2E-35 T 14-10-2018 MC28_5298 fec0457a1dde40d3e3fb92e45240f4b4 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 432 610 2.7E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 SMART SM00853 461 603 2.6E-52 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 SUPERFAMILY SSF118116 457 645 5.62E-55 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 SUPERFAMILY SSF54211 189 326 7.21E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 Gene3D G3DSA:2.30.42.20 462 645 1.4E-63 T 14-10-2018 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 SUPERFAMILY SSF55874 3 212 6.16E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 Pfam PF08676 MutL C terminal dimerisation domain 461 603 2.7E-46 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 Gene3D G3DSA:3.30.565.10 1 212 1.1E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 120 4.3E-12 T 14-10-2018 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 643 27.439 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 4.0E-37 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 3.4E-99 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 SMART SM01340 208 326 1.8E-56 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 Gene3D G3DSA:3.30.1370.100 503 596 1.4E-63 T 14-10-2018 MC28_2937 aaf25cb41b563de702a9c052862bfd55 647 Gene3D G3DSA:3.30.230.10 214 325 1.0E-33 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 Pfam PF08448 PAS fold 26 135 3.6E-19 T 14-10-2018 IPR013656 PAS fold-4 MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 Pfam PF08448 PAS fold 157 260 3.9E-10 T 14-10-2018 IPR013656 PAS fold-4 MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 SUPERFAMILY SSF55785 25 135 8.2E-9 T 14-10-2018 IPR035965 PAS domain superfamily MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 Gene3D G3DSA:3.30.450.20 21 145 8.4E-14 T 14-10-2018 MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 424 3.3E-27 T 14-10-2018 IPR000160 GGDEF domain MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 Pfam PF00563 EAL domain 443 677 2.3E-70 T 14-10-2018 IPR001633 EAL domain MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 260 1.4E-18 T 14-10-2018 IPR000014 PAS domain MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 SMART SM00091 147 213 2.1E-9 T 14-10-2018 IPR000014 PAS domain MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 SMART SM00091 19 88 19.0 T 14-10-2018 IPR000014 PAS domain MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 SUPERFAMILY SSF55073 276 427 1.26E-36 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 SMART SM00052 437 682 5.5E-114 T 14-10-2018 IPR001633 EAL domain MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 Gene3D G3DSA:3.30.450.20 146 261 1.4E-17 T 14-10-2018 MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 SMART SM00267 259 427 1.7E-39 T 14-10-2018 IPR000160 GGDEF domain MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 SUPERFAMILY SSF141868 442 687 2.48E-84 T 14-10-2018 IPR035919 EAL domain superfamily MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 422 5.0E-36 T 14-10-2018 IPR000160 GGDEF domain MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 Gene3D G3DSA:3.30.70.270 265 439 5.1E-44 T 14-10-2018 MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 SUPERFAMILY SSF55785 132 258 1.61E-18 T 14-10-2018 IPR035965 PAS domain superfamily MC28_5272 8f6582ee65d1eb41ec544a2e14406f81 689 Gene3D G3DSA:3.20.20.450 440 689 7.6E-94 T 14-10-2018 IPR035919 EAL domain superfamily MC28_1682 45bc4b9ddf62dbf9a0ca176b74b4e0d4 135 Gene3D G3DSA:3.30.720.100 10 74 1.6E-33 T 14-10-2018 MC28_1682 45bc4b9ddf62dbf9a0ca176b74b4e0d4 135 SUPERFAMILY SSF54593 6 132 2.97E-40 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1682 45bc4b9ddf62dbf9a0ca176b74b4e0d4 135 PIRSF PIRSF500687 1 135 6.0E-70 T 14-10-2018 IPR027259 Predicted 3-demethylubiquinone-9 3-methyltransferase, bacterial MC28_1682 45bc4b9ddf62dbf9a0ca176b74b4e0d4 135 PIRSF PIRSF021700 3 135 7.2E-45 T 14-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase MC28_1682 45bc4b9ddf62dbf9a0ca176b74b4e0d4 135 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 132 4.2E-45 T 14-10-2018 IPR028973 PhnB-like MC28_1682 45bc4b9ddf62dbf9a0ca176b74b4e0d4 135 Gene3D G3DSA:3.30.720.110 75 135 3.7E-32 T 14-10-2018 MC28_0218 449bf46509d06b2ed60d84ba7ac59f06 188 TIGRFAM TIGR02366 DHAK_reg: probable dihydroxyacetone kinase regulator 4 179 9.8E-79 T 14-10-2018 IPR012738 Transcription regulator DhaS MC28_0218 449bf46509d06b2ed60d84ba7ac59f06 188 Pfam PF14278 Transcriptional regulator C-terminal region 78 157 4.4E-15 T 14-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type MC28_0218 449bf46509d06b2ed60d84ba7ac59f06 188 Gene3D G3DSA:1.10.357.10 1 187 1.5E-52 T 14-10-2018 MC28_0218 449bf46509d06b2ed60d84ba7ac59f06 188 SUPERFAMILY SSF46689 5 63 6.67E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_0218 449bf46509d06b2ed60d84ba7ac59f06 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 54 1.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0296 92e1468ccec1793000ee9b7bdb8361c3 267 Gene3D G3DSA:1.10.1660.10 2 141 2.4E-22 T 14-10-2018 MC28_0296 92e1468ccec1793000ee9b7bdb8361c3 267 SUPERFAMILY SSF46955 4 108 9.52E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_0296 92e1468ccec1793000ee9b7bdb8361c3 267 SUPERFAMILY SSF55136 124 252 8.89E-7 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_0296 92e1468ccec1793000ee9b7bdb8361c3 267 SMART SM00422 5 75 7.0E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0296 92e1468ccec1793000ee9b7bdb8361c3 267 Pfam PF13411 MerR HTH family regulatory protein 5 74 3.5E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 Pfam PF01938 TRAM domain 10 65 1.2E-12 T 14-10-2018 IPR002792 TRAM domain MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 441 451 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 SUPERFAMILY SSF50249 3 66 4.85E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 SUPERFAMILY SSF53335 75 456 1.03E-82 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 Gene3D G3DSA:2.40.50.140 2 86 4.0E-24 T 14-10-2018 MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 23 451 4.7E-176 T 14-10-2018 MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 Gene3D G3DSA:3.40.1350.30 136 291 2.4E-117 T 14-10-2018 MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 390 421 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 Gene3D G3DSA:3.40.50.150 88 453 2.4E-117 T 14-10-2018 MC28_5151 984013274c4bd5e3e7f5362c4779a9ff 459 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 95 457 1.7E-18 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 MC28_0365 17f1697f5f98ac320e566acdf6664d24 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 1.2E-28 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF MC28_2413 ab1e7f54d651ccce939bba4b25cce9b6 411 SUPERFAMILY SSF56300 76 340 4.03E-42 T 14-10-2018 MC28_2413 ab1e7f54d651ccce939bba4b25cce9b6 411 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 77 323 3.4E-70 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA MC28_2413 ab1e7f54d651ccce939bba4b25cce9b6 411 Gene3D G3DSA:3.60.21.10 160 333 1.1E-6 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_2413 ab1e7f54d651ccce939bba4b25cce9b6 411 SMART SM00854 76 323 9.1E-86 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA MC28_0640 533ca8695a875e5caae97f1d22e223e2 193 Gene3D G3DSA:3.20.19.10 1 171 3.7E-76 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 MC28_0640 533ca8695a875e5caae97f1d22e223e2 193 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 183 8.8E-74 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 MC28_0640 533ca8695a875e5caae97f1d22e223e2 193 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 193 40.276 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 MC28_0640 533ca8695a875e5caae97f1d22e223e2 193 SUPERFAMILY SSF52016 1 188 1.86E-60 T 14-10-2018 MC28_0640 533ca8695a875e5caae97f1d22e223e2 193 Pfam PF00694 Aconitase C-terminal domain 1 123 2.1E-36 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 MC28_3370 76768736bdd86853dfd49fc34dec8e9e 290 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3370 76768736bdd86853dfd49fc34dec8e9e 290 Gene3D G3DSA:3.40.50.300 1 243 1.5E-51 T 14-10-2018 MC28_3370 76768736bdd86853dfd49fc34dec8e9e 290 Pfam PF00005 ABC transporter 14 151 1.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3370 76768736bdd86853dfd49fc34dec8e9e 290 SMART SM00382 23 199 3.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3370 76768736bdd86853dfd49fc34dec8e9e 290 SUPERFAMILY SSF52540 3 216 1.85E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3983 9ef5ce9ca4680c83f5d53200219ced0a 181 SUPERFAMILY SSF55144 3 180 3.14E-38 T 14-10-2018 IPR009097 Cyclic phosphodiesterase MC28_3983 9ef5ce9ca4680c83f5d53200219ced0a 181 Pfam PF02834 LigT like Phosphoesterase 11 90 1.0E-13 T 14-10-2018 IPR014051 Phosphoesterase, HXTX MC28_3983 9ef5ce9ca4680c83f5d53200219ced0a 181 Pfam PF02834 LigT like Phosphoesterase 99 171 1.8E-9 T 14-10-2018 IPR014051 Phosphoesterase, HXTX MC28_3983 9ef5ce9ca4680c83f5d53200219ced0a 181 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 3 179 21.177 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 MC28_3983 9ef5ce9ca4680c83f5d53200219ced0a 181 Gene3D G3DSA:3.90.1140.10 2 180 2.3E-40 T 14-10-2018 MC28_3983 9ef5ce9ca4680c83f5d53200219ced0a 181 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 4 179 4.5E-52 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 PIRSF PIRSF002162 1 178 7.8E-51 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 1.6E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.6E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 1.6E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 1.8E-77 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 Gene3D G3DSA:3.90.930.12 84 179 1.4E-41 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 SUPERFAMILY SSF56053 1 83 5.04E-27 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 Pfam PF00347 Ribosomal protein L6 91 165 1.2E-21 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 Pfam PF00347 Ribosomal protein L6 11 83 2.4E-23 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 39.451 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 SUPERFAMILY SSF56053 84 177 8.06E-36 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4837 466f5cfc844bc0cd9fcbbc0376189b1b 179 Gene3D G3DSA:3.90.930.12 1 83 5.5E-32 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_2142 b2d5797b02cf32e4e39e38747f91dc42 390 SUPERFAMILY SSF103263 1 389 9.03E-152 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_2142 b2d5797b02cf32e4e39e38747f91dc42 390 Gene3D G3DSA:3.60.150.10 1 390 9.4E-157 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_2142 b2d5797b02cf32e4e39e38747f91dc42 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_2142 b2d5797b02cf32e4e39e38747f91dc42 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 370 2.1E-131 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_2142 b2d5797b02cf32e4e39e38747f91dc42 390 Pfam PF01264 Chorismate synthase 1 364 6.8E-125 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_2142 b2d5797b02cf32e4e39e38747f91dc42 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 36.979 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_2142 b2d5797b02cf32e4e39e38747f91dc42 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_2142 b2d5797b02cf32e4e39e38747f91dc42 390 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_2142 b2d5797b02cf32e4e39e38747f91dc42 390 PIRSF PIRSF001456 1 385 1.8E-131 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_1763 e673574084d3272ffc9c33ce43de231a 617 SUPERFAMILY SSF49478 505 567 1.88E-7 T 14-10-2018 MC28_1763 e673574084d3272ffc9c33ce43de231a 617 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 12 294 1.0E-22 T 14-10-2018 IPR026588 Choice-of-anchor A domain MC28_1763 e673574084d3272ffc9c33ce43de231a 617 SUPERFAMILY SSF49478 405 471 8.63E-8 T 14-10-2018 MC28_1763 e673574084d3272ffc9c33ce43de231a 617 SUPERFAMILY SSF49478 310 378 4.32E-8 T 14-10-2018 MC28_1763 e673574084d3272ffc9c33ce43de231a 617 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 586 615 1.0E-4 T 14-10-2018 MC28_1763 e673574084d3272ffc9c33ce43de231a 617 Gene3D G3DSA:2.60.40.10 304 397 6.8E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1763 e673574084d3272ffc9c33ce43de231a 617 Gene3D G3DSA:2.60.40.10 399 490 1.1E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1763 e673574084d3272ffc9c33ce43de231a 617 Gene3D G3DSA:2.60.40.10 493 590 1.6E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_3990 2eb2ed8a6b3b8a9b2fa3a6004df8c5d4 106 Gene3D G3DSA:1.10.10.10 3 106 3.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3990 2eb2ed8a6b3b8a9b2fa3a6004df8c5d4 106 SMART SM00418 9 87 7.5E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3990 2eb2ed8a6b3b8a9b2fa3a6004df8c5d4 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 1.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3990 2eb2ed8a6b3b8a9b2fa3a6004df8c5d4 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 1.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3990 2eb2ed8a6b3b8a9b2fa3a6004df8c5d4 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 1.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3990 2eb2ed8a6b3b8a9b2fa3a6004df8c5d4 106 SUPERFAMILY SSF46785 8 93 4.55E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3990 2eb2ed8a6b3b8a9b2fa3a6004df8c5d4 106 Pfam PF12840 Helix-turn-helix domain 9 67 2.3E-12 T 14-10-2018 MC28_0976 207d413ffd9a40f76f7a355311ceba2b 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 106 120 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 MC28_0976 207d413ffd9a40f76f7a355311ceba2b 443 Gene3D G3DSA:3.40.50.1100 22 434 1.5E-201 T 14-10-2018 MC28_0976 207d413ffd9a40f76f7a355311ceba2b 443 SUPERFAMILY SSF53686 49 432 2.06E-57 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_0976 207d413ffd9a40f76f7a355311ceba2b 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 71 395 2.6E-57 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_0976 207d413ffd9a40f76f7a355311ceba2b 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 9 434 1.2E-223 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 MC28_0976 207d413ffd9a40f76f7a355311ceba2b 443 Gene3D G3DSA:3.40.50.1100 114 236 1.5E-201 T 14-10-2018 MC28_0976 207d413ffd9a40f76f7a355311ceba2b 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 262.851 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 SUPERFAMILY SSF49478 270 329 1.92E-9 T 14-10-2018 MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 SUPERFAMILY SSF49478 360 421 2.51E-8 T 14-10-2018 MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 SUPERFAMILY SSF49478 449 513 1.26E-7 T 14-10-2018 MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 Gene3D G3DSA:2.60.40.10 348 437 9.8E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 Gene3D G3DSA:2.60.40.10 621 719 1.5E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 Gene3D G3DSA:2.60.40.10 260 347 8.7E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 Gene3D G3DSA:2.60.40.10 438 528 1.4E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 Gene3D G3DSA:2.60.40.10 529 620 2.7E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 781 817 0.0018 T 14-10-2018 MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 SUPERFAMILY SSF49478 631 699 3.65E-9 T 14-10-2018 MC28_C025 ae47d2475b6508ef13228e897ad3d6dc 820 SUPERFAMILY SSF49478 539 607 2.0E-9 T 14-10-2018 MC28_1697 72a2f858e8d3ea8e28fc4c82e5aab465 292 SUPERFAMILY SSF47413 5 65 3.38E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_1697 72a2f858e8d3ea8e28fc4c82e5aab465 292 Pfam PF12844 Helix-turn-helix domain 7 68 1.9E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1697 72a2f858e8d3ea8e28fc4c82e5aab465 292 Gene3D G3DSA:1.25.40.10 1 292 8.5E-83 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1697 72a2f858e8d3ea8e28fc4c82e5aab465 292 SUPERFAMILY SSF48452 133 270 5.48E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1697 72a2f858e8d3ea8e28fc4c82e5aab465 292 SMART SM00530 9 63 3.2E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_2866 cc8da98c441d41cce9c513742b90337e 423 Gene3D G3DSA:3.40.640.10 58 271 7.3E-186 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2866 cc8da98c441d41cce9c513742b90337e 423 Gene3D G3DSA:3.90.1150.60 17 411 7.3E-186 T 14-10-2018 MC28_2866 cc8da98c441d41cce9c513742b90337e 423 SUPERFAMILY SSF53383 60 398 1.22E-47 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_2866 cc8da98c441d41cce9c513742b90337e 423 Pfam PF06838 Methionine gamma-lyase 14 414 3.6E-211 T 14-10-2018 IPR009651 Putative methionine gamma-lyase MC28_3902 169085c41fb0ca93887443b9ebd0cef1 170 Pfam PF00582 Universal stress protein family 23 162 1.9E-36 T 14-10-2018 IPR006016 UspA MC28_3902 169085c41fb0ca93887443b9ebd0cef1 170 SUPERFAMILY SSF52402 23 162 1.76E-35 T 14-10-2018 MC28_3902 169085c41fb0ca93887443b9ebd0cef1 170 Gene3D G3DSA:3.40.50.620 25 162 2.5E-42 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3902 169085c41fb0ca93887443b9ebd0cef1 170 PIRSF PIRSF006276 19 165 4.6E-23 T 14-10-2018 IPR006015 Universal stress protein A MC28_3902 169085c41fb0ca93887443b9ebd0cef1 170 PRINTS PR01438 Universal stress protein signature 122 134 1.0E-18 T 14-10-2018 IPR006015 Universal stress protein A MC28_3902 169085c41fb0ca93887443b9ebd0cef1 170 PRINTS PR01438 Universal stress protein signature 23 41 1.0E-18 T 14-10-2018 IPR006015 Universal stress protein A MC28_3902 169085c41fb0ca93887443b9ebd0cef1 170 PRINTS PR01438 Universal stress protein signature 140 162 1.0E-18 T 14-10-2018 IPR006015 Universal stress protein A MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 Gene3D G3DSA:3.40.50.1370 154 315 1.7E-138 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 326 3.7E-57 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 PRINTS PR00102 Ornithine carbamoyltransferase signature 87 100 2.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 PRINTS PR00102 Ornithine carbamoyltransferase signature 54 68 2.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 PRINTS PR00102 Ornithine carbamoyltransferase signature 227 237 2.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 PRINTS PR00102 Ornithine carbamoyltransferase signature 307 318 2.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 PRINTS PR00102 Ornithine carbamoyltransferase signature 127 141 2.4E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 11 328 6.4E-128 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 273 3.0E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 138 149 3.0E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 56 75 3.0E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 293 316 3.0E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 SUPERFAMILY SSF53671 7 330 2.23E-106 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 10 329 83.656 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 56 63 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 11 151 8.7E-48 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 MC28_5088 7ab6b8745ece93171c18e74f384716fe 332 Gene3D G3DSA:3.40.50.1370 8 325 1.7E-138 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 MC28_3219 78d1b927bd0975a60f1360c7d5f4963e 190 Gene3D G3DSA:3.40.50.1240 1 190 8.9E-46 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_3219 78d1b927bd0975a60f1360c7d5f4963e 190 PIRSF PIRSF000709 2 79 0.0067 T 14-10-2018 MC28_3219 78d1b927bd0975a60f1360c7d5f4963e 190 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 184 1.7E-43 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_3219 78d1b927bd0975a60f1360c7d5f4963e 190 SUPERFAMILY SSF53254 1 189 5.14E-47 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_3219 78d1b927bd0975a60f1360c7d5f4963e 190 SMART SM00855 3 147 1.1E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_3219 78d1b927bd0975a60f1360c7d5f4963e 190 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 MC28_2301 075f7b0d16c0e5396386474c39a182c1 214 SUPERFAMILY SSF52499 3 204 3.92E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_2301 075f7b0d16c0e5396386474c39a182c1 214 Gene3D G3DSA:3.40.50.850 2 204 3.1E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_2301 075f7b0d16c0e5396386474c39a182c1 214 Pfam PF00857 Isochorismatase family 12 163 1.8E-24 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1098 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SUPERFAMILY SSF52540 802 1008 8.11E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SUPERFAMILY SSF52540 377 490 3.77E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SUPERFAMILY SSF52540 13 367 6.34E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Gene3D G3DSA:3.40.50.11180 36 326 1.2E-63 T 14-10-2018 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1118 28.928 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Pfam PF02559 CarD-like/TRCF domain 500 595 7.0E-32 T 14-10-2018 IPR003711 CarD-like/TRCF domain MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SMART SM00982 1024 1124 6.1E-40 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SMART SM00487 620 810 5.5E-36 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Gene3D G3DSA:3.40.50.300 498 1008 1.2E-246 T 14-10-2018 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Gene3D G3DSA:2.30.30.840 503 561 1.2E-246 T 14-10-2018 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SUPERFAMILY SSF143517 1014 1168 1.57E-35 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SUPERFAMILY SSF141259 490 568 1.7E-26 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Pfam PF00271 Helicase conserved C-terminal domain 828 929 2.0E-17 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SMART SM00490 846 930 2.7E-19 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Pfam PF00270 DEAD/DEAH box helicase 625 784 3.5E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Pfam PF03461 TRCF domain 1025 1117 1.0E-26 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SUPERFAMILY SSF52540 543 803 6.82E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 SMART SM01058 499 596 5.8E-50 T 14-10-2018 IPR003711 CarD-like/TRCF domain MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Gene3D G3DSA:3.30.2060.10 140 225 1.2E-63 T 14-10-2018 MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Gene3D G3DSA:3.90.1150.50 1020 1175 1.8E-40 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain MC28_4768 7bdca629327344b4d49f55dd537b5dc6 1176 Gene3D G3DSA:3.40.50.300 562 801 1.2E-246 T 14-10-2018 MC28_C050 92b3f7b0c096f98a4c9cf9533c4bd303 162 Pfam PF13610 DDE domain 16 139 5.3E-34 T 14-10-2018 IPR032874 DDE domain MC28_4095 158d411d0358f72795ae38649bc0c138 75 Pfam PF04023 FeoA domain 1 73 3.2E-15 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 MC28_4095 158d411d0358f72795ae38649bc0c138 75 SUPERFAMILY SSF50037 3 73 5.8E-15 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal MC28_4095 158d411d0358f72795ae38649bc0c138 75 SMART SM00899 1 74 7.3E-18 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 MC28_4095 158d411d0358f72795ae38649bc0c138 75 Gene3D G3DSA:2.30.30.90 1 75 2.0E-17 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain MC28_4931 7c77c9070b6f595c399ae9a462ad21be 385 Pfam PF04209 homogentisate 1,2-dioxygenase 95 377 4.0E-19 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 MC28_4931 7c77c9070b6f595c399ae9a462ad21be 385 SUPERFAMILY SSF51182 2 377 1.18E-99 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_4931 7c77c9070b6f595c399ae9a462ad21be 385 Gene3D G3DSA:2.60.120.10 262 355 1.5E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_4931 7c77c9070b6f595c399ae9a462ad21be 385 Gene3D G3DSA:2.60.120.10 72 170 3.8E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 Gene3D G3DSA:3.40.50.620 3 375 3.9E-150 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 PRINTS PR01041 Methionyl-tRNA synthetase signature 287 302 2.7E-19 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 PRINTS PR01041 Methionyl-tRNA synthetase signature 37 51 2.7E-19 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 PRINTS PR01041 Methionyl-tRNA synthetase signature 85 96 2.7E-19 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 PRINTS PR01041 Methionyl-tRNA synthetase signature 5 18 2.7E-19 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 PRINTS PR01041 Methionyl-tRNA synthetase signature 380 391 2.7E-19 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 2.7E-19 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 Gene3D G3DSA:1.10.730.10 376 539 2.4E-39 T 14-10-2018 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 SUPERFAMILY SSF52374 4 380 1.46E-92 T 14-10-2018 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 SUPERFAMILY SSF57770 137 170 3.14E-8 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 SUPERFAMILY SSF47323 385 540 4.3E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 Pfam PF09334 tRNA synthetases class I (M) 4 393 4.2E-141 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 Hamap MF_00098 Methionine--tRNA ligase [metG]. 1 538 38.701 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 Gene3D G3DSA:2.20.28.20 137 170 3.9E-150 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 528 1.0E-160 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MC28_4300 4064ed2de03a556b202a7cbb1cfc90b7 544 Pfam PF08264 Anticodon-binding domain of tRNA 416 513 1.5E-8 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 MC28_4792 78aacb1063ee7343130e960da8468df3 182 Pfam PF02151 UvrB/uvrC motif 139 172 3.1E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 MC28_4792 78aacb1063ee7343130e960da8468df3 182 SUPERFAMILY SSF46600 138 174 4.84E-6 T 14-10-2018 IPR036876 UVR domain superfamily MC28_4792 78aacb1063ee7343130e960da8468df3 182 PIRSF PIRSF015034 1 182 8.6E-61 T 14-10-2018 IPR025542 YacH protein MC28_3364 0fcb4142fe6648b2b5e74343e2fb823a 508 SUPERFAMILY SSF161070 4 486 1.31E-142 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 MC28_3364 0fcb4142fe6648b2b5e74343e2fb823a 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 4.8E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_3364 0fcb4142fe6648b2b5e74343e2fb823a 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 4.8E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_3364 0fcb4142fe6648b2b5e74343e2fb823a 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 4.8E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_3364 0fcb4142fe6648b2b5e74343e2fb823a 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 4.8E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_3364 0fcb4142fe6648b2b5e74343e2fb823a 508 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 4.8E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_3364 0fcb4142fe6648b2b5e74343e2fb823a 508 Pfam PF00209 Sodium:neurotransmitter symporter family 124 482 4.9E-78 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_3364 0fcb4142fe6648b2b5e74343e2fb823a 508 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 28 42 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_3951 41e45a053afd8017930eee0079f752b6 312 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 125 5.4E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 MC28_3951 41e45a053afd8017930eee0079f752b6 312 SUPERFAMILY SSF51735 8 141 7.58E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3951 41e45a053afd8017930eee0079f752b6 312 Gene3D G3DSA:3.30.360.10 125 312 2.9E-52 T 14-10-2018 MC28_3951 41e45a053afd8017930eee0079f752b6 312 SUPERFAMILY SSF55347 130 270 4.25E-42 T 14-10-2018 MC28_3951 41e45a053afd8017930eee0079f752b6 312 Gene3D G3DSA:3.40.50.720 3 124 7.5E-32 T 14-10-2018 MC28_2058 d6a31cfb67c824020c20b2923a4aff8a 145 Gene3D G3DSA:3.40.630.30 4 139 3.2E-16 T 14-10-2018 MC28_2058 d6a31cfb67c824020c20b2923a4aff8a 145 SUPERFAMILY SSF55729 1 120 1.35E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2058 d6a31cfb67c824020c20b2923a4aff8a 145 Pfam PF00583 Acetyltransferase (GNAT) family 34 111 1.2E-8 T 14-10-2018 IPR000182 GNAT domain MC28_3066 55a3ea6a781956a5b176c020de2a6f73 75 Pfam PF13083 KH domain 2 74 7.6E-23 T 14-10-2018 MC28_3066 55a3ea6a781956a5b176c020de2a6f73 75 Gene3D G3DSA:3.30.300.20 1 72 2.5E-6 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_3066 55a3ea6a781956a5b176c020de2a6f73 75 SUPERFAMILY SSF54814 15 58 1.96E-7 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 MC28_3066 55a3ea6a781956a5b176c020de2a6f73 75 Hamap MF_00088 UPF0109 protein . 1 75 21.45 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 MC28_0519 ae64bfdd0c452f7c4ea1f302c9a04e5b 205 Pfam PF01569 PAP2 superfamily 83 192 1.8E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MC28_0519 ae64bfdd0c452f7c4ea1f302c9a04e5b 205 SUPERFAMILY SSF48317 4 197 2.75E-34 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily MC28_0519 ae64bfdd0c452f7c4ea1f302c9a04e5b 205 Gene3D G3DSA:1.20.144.10 1 107 1.6E-10 T 14-10-2018 MC28_0519 ae64bfdd0c452f7c4ea1f302c9a04e5b 205 Gene3D G3DSA:1.20.144.10 108 205 5.3E-24 T 14-10-2018 MC28_0519 ae64bfdd0c452f7c4ea1f302c9a04e5b 205 SMART SM00014 75 189 1.0E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MC28_4488 241b5d311b2f1c16668b40b30cb1a23a 397 Gene3D G3DSA:2.40.420.20 324 381 1.3E-30 T 14-10-2018 MC28_4488 241b5d311b2f1c16668b40b30cb1a23a 397 Gene3D G3DSA:2.40.50.100 73 234 1.3E-30 T 14-10-2018 MC28_4488 241b5d311b2f1c16668b40b30cb1a23a 397 Gene3D G3DSA:2.40.30.170 64 323 1.3E-30 T 14-10-2018 MC28_4488 241b5d311b2f1c16668b40b30cb1a23a 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 82 275 6.8E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MC28_4488 241b5d311b2f1c16668b40b30cb1a23a 397 Gene3D G3DSA:1.10.287.470 108 195 1.3E-30 T 14-10-2018 MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 SUPERFAMILY SSF56235 24 396 6.18E-76 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 Gene3D G3DSA:2.160.20.60 1217 1478 1.9E-59 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 Pfam PF01645 Conserved region in glutamate synthase 790 1151 2.3E-101 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 Pfam PF00310 Glutamine amidotransferases class-II 24 390 3.8E-49 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 Gene3D G3DSA:3.60.20.10 24 535 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 SUPERFAMILY SSF69336 1227 1474 4.32E-43 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 SUPERFAMILY SSF51395 449 1168 6.72E-162 T 14-10-2018 MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 Pfam PF04898 Glutamate synthase central domain 450 729 3.3E-69 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 Pfam PF01493 GXGXG motif 1230 1338 2.2E-14 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 Pfam PF01493 GXGXG motif 1358 1400 5.7E-7 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 Gene3D G3DSA:3.20.20.70 474 1166 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_5254 d71262d25eb0f2b3a6f0a006cee5d0c1 1478 Gene3D G3DSA:3.20.20.70 423 776 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4169 f4365520040c938fc00a6d86f596821c 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 MC28_4169 f4365520040c938fc00a6d86f596821c 396 Gene3D G3DSA:3.40.640.10 61 282 5.8E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_4169 f4365520040c938fc00a6d86f596821c 396 SUPERFAMILY SSF53383 7 385 3.36E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_4169 f4365520040c938fc00a6d86f596821c 396 Gene3D G3DSA:3.90.1150.10 25 379 5.8E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_4169 f4365520040c938fc00a6d86f596821c 396 Pfam PF00155 Aminotransferase class I and II 30 378 7.1E-70 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_4821 35868332db1e892ba7188e536bd58957 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4821 35868332db1e892ba7188e536bd58957 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.4E-36 T 14-10-2018 IPR027486 Ribosomal protein S10 domain MC28_4821 35868332db1e892ba7188e536bd58957 102 SUPERFAMILY SSF54999 5 102 1.2E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily MC28_4821 35868332db1e892ba7188e536bd58957 102 SMART SM01403 7 101 8.1E-60 T 14-10-2018 IPR027486 Ribosomal protein S10 domain MC28_4821 35868332db1e892ba7188e536bd58957 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4821 35868332db1e892ba7188e536bd58957 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4821 35868332db1e892ba7188e536bd58957 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4821 35868332db1e892ba7188e536bd58957 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.5E-46 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4821 35868332db1e892ba7188e536bd58957 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.164 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4821 35868332db1e892ba7188e536bd58957 102 Gene3D G3DSA:3.30.70.600 1 102 5.3E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Gene3D G3DSA:3.30.470.130 1 462 3.9E-195 T 14-10-2018 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 116 1.7E-42 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 SUPERFAMILY SSF51246 342 460 8.89E-38 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 SUPERFAMILY SSF51569 527 838 1.79E-86 T 14-10-2018 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 9 1146 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 PIRSF PIRSF001594 2 1148 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 SUPERFAMILY SSF52440 4 118 3.31E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Gene3D G3DSA:2.40.50.100 1071 1147 6.9E-26 T 14-10-2018 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Gene3D G3DSA:3.20.20.70 515 819 3.9E-299 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 SUPERFAMILY SSF51230 1072 1146 8.64E-23 T 14-10-2018 IPR011053 Single hybrid motif MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Pfam PF00364 Biotin-requiring enzyme 1080 1146 3.0E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Gene3D G3DSA:1.10.472.90 820 944 3.9E-299 T 14-10-2018 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 SMART SM00878 347 454 7.3E-52 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Pfam PF02436 Conserved carboxylase domain 830 1030 1.5E-77 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Pfam PF00682 HMGL-like 535 807 1.3E-27 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 SUPERFAMILY SSF89000 835 1012 3.81E-60 T 14-10-2018 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 121 327 5.7E-80 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 SUPERFAMILY SSF56059 89 335 3.18E-68 T 14-10-2018 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Gene3D G3DSA:3.10.600.10 507 1062 3.9E-299 T 14-10-2018 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Pfam PF02785 Biotin carboxylase C-terminal domain 347 454 2.6E-33 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 MC28_3232 12098a8ffb8eac73dc0ae012c3f282c3 1148 Gene3D G3DSA:1.10.10.2790 945 980 3.9E-299 T 14-10-2018 MC28_G039 a41a43e605e0854416dcbfb407832eae 401 PIRSF PIRSF000390 15 395 6.4E-122 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase MC28_G039 a41a43e605e0854416dcbfb407832eae 401 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 19 393 2.4E-154 T 14-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase MC28_G039 a41a43e605e0854416dcbfb407832eae 401 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 26 390 2.3E-129 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase MC28_G039 a41a43e605e0854416dcbfb407832eae 401 Gene3D G3DSA:3.90.1150.10 268 396 2.2E-38 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_G039 a41a43e605e0854416dcbfb407832eae 401 SUPERFAMILY SSF53383 19 394 2.83E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_G039 a41a43e605e0854416dcbfb407832eae 401 Gene3D G3DSA:3.40.640.10 7 267 1.4E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2092 59f9c393081422a1f4d46d2e40a48e81 223 Pfam PF13261 Protein of unknown function (DUF4052) 4 220 1.4E-95 T 14-10-2018 IPR025126 Protein of unknown function DUF4052 MC28_0855 4a93192796f35fb64b69b821ffa79a1c 461 SUPERFAMILY SSF53383 31 459 5.23E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0855 4a93192796f35fb64b69b821ffa79a1c 461 PIRSF PIRSF000521 40 461 1.0E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0855 4a93192796f35fb64b69b821ffa79a1c 461 Pfam PF00202 Aminotransferase class-III 42 457 1.6E-109 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0855 4a93192796f35fb64b69b821ffa79a1c 461 Gene3D G3DSA:3.90.1150.10 25 458 1.5E-152 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_0855 4a93192796f35fb64b69b821ffa79a1c 461 Gene3D G3DSA:3.40.640.10 76 350 1.5E-152 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_0855 4a93192796f35fb64b69b821ffa79a1c 461 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 261 298 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_2195 70a94376d3c27d9515c205a62a0f958d 193 Gene3D G3DSA:3.40.50.300 3 193 2.9E-51 T 14-10-2018 MC28_2195 70a94376d3c27d9515c205a62a0f958d 193 SUPERFAMILY SSF52540 12 192 6.76E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2195 70a94376d3c27d9515c205a62a0f958d 193 Pfam PF13238 AAA domain 20 162 1.0E-7 T 14-10-2018 MC28_1068 f674912b1023c3890dd568b38cf89ef2 131 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 101 2.1E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain MC28_1068 f674912b1023c3890dd568b38cf89ef2 131 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 129 6.6E-48 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 MC28_1068 f674912b1023c3890dd568b38cf89ef2 131 Gene3D G3DSA:3.40.140.10 1 131 2.7E-55 T 14-10-2018 MC28_1068 f674912b1023c3890dd568b38cf89ef2 131 SUPERFAMILY SSF53927 2 130 3.01E-48 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 MC28_1068 f674912b1023c3890dd568b38cf89ef2 131 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 MC28_F246 d8072fdb038e7f93b79e215feb66bca7 75 SUPERFAMILY SSF47413 16 61 5.3E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_F246 d8072fdb038e7f93b79e215feb66bca7 75 Pfam PF01381 Helix-turn-helix 17 61 2.3E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F246 d8072fdb038e7f93b79e215feb66bca7 75 Gene3D G3DSA:1.10.260.40 9 74 2.4E-7 T 14-10-2018 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 312 4.1E-72 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 324 5.1E-141 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 SUPERFAMILY SSF51735 3 167 1.28E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 6.5E-43 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 PIRSF PIRSF000149 1 333 4.4E-142 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 SUPERFAMILY SSF55347 151 313 4.17E-75 T 14-10-2018 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 Gene3D G3DSA:3.30.360.10 150 314 6.4E-161 T 14-10-2018 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 SMART SM00846 2 151 3.6E-98 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 Gene3D G3DSA:3.40.50.720 3 328 6.4E-161 T 14-10-2018 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 5.1E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 5.1E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.1E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.1E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4371 1d01c2023665765c21ac37ef47c7fee7 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 5.1E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4740 fa0fd4e1d679364b1de4b5cbae537f21 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 1.8E-89 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 MC28_4740 fa0fd4e1d679364b1de4b5cbae537f21 198 Gene3D G3DSA:3.40.1360.10 77 198 3.1E-50 T 14-10-2018 MC28_4740 fa0fd4e1d679364b1de4b5cbae537f21 198 Pfam PF13662 Toprim domain 81 171 2.6E-26 T 14-10-2018 IPR006171 TOPRIM domain MC28_4740 fa0fd4e1d679364b1de4b5cbae537f21 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 110.521 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 MC28_4740 fa0fd4e1d679364b1de4b5cbae537f21 198 SMART SM00493 80 165 7.3E-18 T 14-10-2018 IPR006171 TOPRIM domain MC28_4740 fa0fd4e1d679364b1de4b5cbae537f21 198 Gene3D G3DSA:1.10.8.420 1 53 1.6E-20 T 14-10-2018 MC28_4740 fa0fd4e1d679364b1de4b5cbae537f21 198 Pfam PF02132 RecR protein 40 78 2.1E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger MC28_4740 fa0fd4e1d679364b1de4b5cbae537f21 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 MC28_4740 fa0fd4e1d679364b1de4b5cbae537f21 198 SUPERFAMILY SSF111304 1 198 8.89E-79 T 14-10-2018 IPR023627 Recombination protein RecR MC28_4935 9a7454e9402babce1160a520b37a1531 458 Pfam PF01225 Mur ligase family, catalytic domain 26 101 9.7E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 MC28_4935 9a7454e9402babce1160a520b37a1531 458 Gene3D G3DSA:3.40.1190.10 87 316 3.5E-69 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_4935 9a7454e9402babce1160a520b37a1531 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 457 7.5E-139 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4935 9a7454e9402babce1160a520b37a1531 458 Gene3D G3DSA:3.40.1390.10 2 84 1.3E-23 T 14-10-2018 MC28_4935 9a7454e9402babce1160a520b37a1531 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 398 1.7E-16 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 MC28_4935 9a7454e9402babce1160a520b37a1531 458 SUPERFAMILY SSF53244 319 457 1.21E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_4935 9a7454e9402babce1160a520b37a1531 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 458 35.99 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4935 9a7454e9402babce1160a520b37a1531 458 Gene3D G3DSA:3.90.190.20 317 458 2.0E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_4935 9a7454e9402babce1160a520b37a1531 458 SUPERFAMILY SSF53623 106 315 4.84E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_4935 9a7454e9402babce1160a520b37a1531 458 Pfam PF08245 Mur ligase middle domain 111 298 5.5E-49 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 MC28_4935 9a7454e9402babce1160a520b37a1531 458 SUPERFAMILY SSF63418 5 103 1.57E-25 T 14-10-2018 IPR035911 MurE/MurF, N-terminal MC28_0255 1b0c85495a9c27e484dfeb1a3560bea9 972 Pfam PF13514 AAA domain 2 196 3.1E-25 T 14-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain MC28_0255 1b0c85495a9c27e484dfeb1a3560bea9 972 Gene3D G3DSA:3.40.50.300 739 972 2.6E-18 T 14-10-2018 MC28_0255 1b0c85495a9c27e484dfeb1a3560bea9 972 Gene3D G3DSA:3.40.50.300 1 261 3.5E-20 T 14-10-2018 MC28_0255 1b0c85495a9c27e484dfeb1a3560bea9 972 SUPERFAMILY SSF52540 2 963 1.35E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4671 e768af9dc3c8957f782f9f141056ae2e 317 Pfam PF01594 AI-2E family transporter 3 303 3.8E-44 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 922 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 SUPERFAMILY SSF52540 13 569 7.43E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 SUPERFAMILY SSF52540 617 907 2.96E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 Gene3D G3DSA:3.40.50.300 7 595 1.7E-255 T 14-10-2018 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 Gene3D G3DSA:3.40.50.300 613 934 5.7E-146 T 14-10-2018 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 Gene3D G3DSA:1.20.1580.10 691 828 5.7E-146 T 14-10-2018 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 Pfam PF00005 ABC transporter 622 858 1.8E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.457 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 Gene3D G3DSA:1.10.8.280 286 403 1.7E-255 T 14-10-2018 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 Gene3D G3DSA:1.20.1580.10 92 492 1.7E-255 T 14-10-2018 MC28_4401 8bd9674ee9b60c2a13233ca5a21afbc3 956 Gene3D G3DSA:3.30.190.20 132 241 1.7E-255 T 14-10-2018 MC28_1950 a33ba03b8974e6c9f7db3ae309d39ca9 305 Pfam PF00144 Beta-lactamase 18 282 2.6E-23 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_1950 a33ba03b8974e6c9f7db3ae309d39ca9 305 Gene3D G3DSA:3.40.710.10 2 288 3.8E-65 T 14-10-2018 MC28_1950 a33ba03b8974e6c9f7db3ae309d39ca9 305 SUPERFAMILY SSF56601 5 295 1.28E-68 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_0364 5bc5bf792bfc49c032aa7482e820ada1 64 ProDom PD027559 GERMINATION SPORE GERPB PROBABLE PB SPORULATION PB-RELATED 1 64 7.0E-18 T 14-10-2018 IPR024255 Spore germination GerPB MC28_0364 5bc5bf792bfc49c032aa7482e820ada1 64 Pfam PF10803 Spore germination GerPB 1 44 1.8E-21 T 14-10-2018 IPR024255 Spore germination GerPB MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 SUPERFAMILY SSF55973 247 397 3.37E-70 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 9.0E-70 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 Gene3D G3DSA:3.30.300.10 7 247 4.3E-181 T 14-10-2018 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 1.7E-185 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 SUPERFAMILY SSF55973 125 246 8.24E-53 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 Gene3D G3DSA:3.30.300.10 13 284 4.3E-181 T 14-10-2018 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 1.2E-49 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 397 58.787 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 SUPERFAMILY SSF55973 5 111 2.28E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 Gene3D G3DSA:3.30.300.10 104 389 4.3E-181 T 14-10-2018 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 PIRSF PIRSF000497 1 398 1.2E-177 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4053 c859c1bfb05fc4bdb823803c3c35f26a 399 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 7.2E-44 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 MC28_4723 b8a745422a9bc2ae298c6a523b60ea35 70 Pfam PF13275 S4 domain 4 68 1.9E-27 T 14-10-2018 MC28_4723 b8a745422a9bc2ae298c6a523b60ea35 70 Gene3D G3DSA:3.10.290.10 1 68 5.9E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_4723 b8a745422a9bc2ae298c6a523b60ea35 70 SUPERFAMILY SSF55174 2 66 3.53E-18 T 14-10-2018 MC28_4723 b8a745422a9bc2ae298c6a523b60ea35 70 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 4 62 5.4E-32 T 14-10-2018 IPR014330 RNA-binding S4-related,YaaA MC28_4149 69e6d21c7f3b10d0717291fc08814c51 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site MC28_4149 69e6d21c7f3b10d0717291fc08814c51 66 SUPERFAMILY SSF50249 1 64 9.43E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4149 69e6d21c7f3b10d0717291fc08814c51 66 PIRSF PIRSF002599 1 66 6.0E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 MC28_4149 69e6d21c7f3b10d0717291fc08814c51 66 Gene3D G3DSA:2.40.50.140 1 66 2.0E-31 T 14-10-2018 MC28_4149 69e6d21c7f3b10d0717291fc08814c51 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.1E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_4149 69e6d21c7f3b10d0717291fc08814c51 66 PRINTS PR00050 Cold shock protein signature 39 57 4.3E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_4149 69e6d21c7f3b10d0717291fc08814c51 66 PRINTS PR00050 Cold shock protein signature 4 19 4.3E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_4149 69e6d21c7f3b10d0717291fc08814c51 66 PRINTS PR00050 Cold shock protein signature 24 33 4.3E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_4149 69e6d21c7f3b10d0717291fc08814c51 66 SMART SM00357 3 66 2.4E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 Pfam PF08453 Peptidase family M9 N-terminal 78 257 1.7E-55 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 783 848 5.7E-6 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 Gene3D G3DSA:1.10.1740.190 357 500 3.2E-59 T 14-10-2018 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 Gene3D G3DSA:1.10.390.20 501 638 1.7E-56 T 14-10-2018 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 Gene3D G3DSA:2.60.120.380 748 862 4.2E-24 T 14-10-2018 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 447 463 4.7E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 144 162 4.7E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 430 444 4.7E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 510 525 4.7E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 484 502 4.7E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 SUPERFAMILY SSF89260 753 861 1.1E-29 T 14-10-2018 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 Gene3D G3DSA:3.30.980.50 639 747 3.2E-47 T 14-10-2018 MC28_2207 547dc48e53d25738a9868fcae1885fcd 862 Pfam PF01752 Collagenase 283 609 6.1E-81 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_3725 43ce4d1ec86721bd5974f056f4287c0a 283 PIRSF PIRSF001500 1 282 4.2E-67 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 MC28_3725 43ce4d1ec86721bd5974f056f4287c0a 283 SUPERFAMILY SSF55021 178 279 8.33E-23 T 14-10-2018 MC28_3725 43ce4d1ec86721bd5974f056f4287c0a 283 Gene3D G3DSA:3.30.70.260 193 282 7.4E-24 T 14-10-2018 MC28_3725 43ce4d1ec86721bd5974f056f4287c0a 283 Pfam PF00800 Prephenate dehydratase 4 185 1.9E-59 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 MC28_3725 43ce4d1ec86721bd5974f056f4287c0a 283 SUPERFAMILY SSF53850 3 186 1.09E-52 T 14-10-2018 MC28_3725 43ce4d1ec86721bd5974f056f4287c0a 283 Gene3D G3DSA:3.40.190.10 6 181 5.2E-56 T 14-10-2018 MC28_3725 43ce4d1ec86721bd5974f056f4287c0a 283 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 228 235 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 MC28_3725 43ce4d1ec86721bd5974f056f4287c0a 283 Gene3D G3DSA:3.40.190.10 84 173 5.2E-56 T 14-10-2018 MC28_1287 6d5662cb6654cd94a0c64b2f3313bd5d 196 SMART SM00855 2 150 3.2E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_1287 6d5662cb6654cd94a0c64b2f3313bd5d 196 SUPERFAMILY SSF53254 1 194 3.88E-47 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_1287 6d5662cb6654cd94a0c64b2f3313bd5d 196 Gene3D G3DSA:3.40.50.1240 1 196 1.7E-48 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_1287 6d5662cb6654cd94a0c64b2f3313bd5d 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 190 3.1E-45 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_1287 6d5662cb6654cd94a0c64b2f3313bd5d 196 PIRSF PIRSF000709 1 177 3.2E-14 T 14-10-2018 MC28_4081 fce0b1915f7759730bec901404094e32 187 SMART SM00947 26 182 1.0E-40 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MC28_4081 fce0b1915f7759730bec901404094e32 187 Gene3D G3DSA:3.40.1050.10 2 183 1.0E-47 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 MC28_4081 fce0b1915f7759730bec901404094e32 187 Pfam PF00484 Carbonic anhydrase 33 178 2.3E-20 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MC28_4081 fce0b1915f7759730bec901404094e32 187 SUPERFAMILY SSF53056 1 181 2.62E-43 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 MC28_3500 fedff9742e0b3ff98f3772d9e10d3ac5 223 SUPERFAMILY SSF103473 96 215 8.63E-5 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_3500 fedff9742e0b3ff98f3772d9e10d3ac5 223 SUPERFAMILY SSF158560 2 98 1.05E-26 T 14-10-2018 MC28_3500 fedff9742e0b3ff98f3772d9e10d3ac5 223 Pfam PF06570 Protein of unknown function (DUF1129) 32 222 1.3E-9 T 14-10-2018 IPR009214 Protein of unknown function DUF1129 MC28_4493 b3ec20b82fa35d642a9da5e733378ac0 223 SMART SM00862 148 221 8.7E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4493 b3ec20b82fa35d642a9da5e733378ac0 223 SMART SM00448 1 111 2.1E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4493 b3ec20b82fa35d642a9da5e733378ac0 223 Gene3D G3DSA:3.40.50.2300 1 127 4.6E-38 T 14-10-2018 MC28_4493 b3ec20b82fa35d642a9da5e733378ac0 223 SUPERFAMILY SSF52172 1 174 4.7E-41 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4493 b3ec20b82fa35d642a9da5e733378ac0 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 4.6E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4493 b3ec20b82fa35d642a9da5e733378ac0 223 Gene3D G3DSA:1.10.10.10 128 223 6.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4493 b3ec20b82fa35d642a9da5e733378ac0 223 Pfam PF00072 Response regulator receiver domain 3 111 4.4E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 Gene3D G3DSA:2.30.30.790 9 114 1.6E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 114 32.208 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 SUPERFAMILY SSF50104 2 113 1.4E-48 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 3.7E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 PIRSF PIRSF002191 1 114 2.6E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3063 cb756333c82d7774be82e79bdaae1aa6 114 Pfam PF01245 Ribosomal protein L19 4 112 5.0E-53 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_G193 684ce3a2f09485f49886fe361468a595 429 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 345 2.4E-107 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase MC28_G193 684ce3a2f09485f49886fe361468a595 429 SUPERFAMILY SSF51905 3 218 1.58E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_G193 684ce3a2f09485f49886fe361468a595 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 198 216 7.0E-5 T 14-10-2018 MC28_G193 684ce3a2f09485f49886fe361468a595 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.0E-5 T 14-10-2018 MC28_G193 684ce3a2f09485f49886fe361468a595 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 7.0E-5 T 14-10-2018 MC28_G193 684ce3a2f09485f49886fe361468a595 429 SUPERFAMILY SSF51905 150 386 2.51E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_G193 684ce3a2f09485f49886fe361468a595 429 Gene3D G3DSA:3.50.50.60 4 428 1.2E-135 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4103 0813bb609f30618b7f0a4c9d4e3c652d 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 172 1.5E-64 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 MC28_4103 0813bb609f30618b7f0a4c9d4e3c652d 175 Pfam PF00156 Phosphoribosyl transferase domain 13 158 5.8E-25 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 MC28_4103 0813bb609f30618b7f0a4c9d4e3c652d 175 SUPERFAMILY SSF53271 3 174 5.25E-53 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_4103 0813bb609f30618b7f0a4c9d4e3c652d 175 Gene3D G3DSA:3.40.50.2020 1 175 4.8E-66 T 14-10-2018 MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 210 449 6.6E-62 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 5 574 1.9E-213 T 14-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 Gene3D G3DSA:3.40.50.920 466 579 1.9E-30 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 SUPERFAMILY SSF52922 468 576 3.4E-24 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 SUPERFAMILY SSF52518 196 458 3.67E-73 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 SUPERFAMILY SSF53323 1 221 4.32E-46 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 476 570 1.0E-12 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 Gene3D G3DSA:3.40.920.10 1 185 2.0E-27 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 Gene3D G3DSA:3.40.50.970 186 386 3.0E-76 T 14-10-2018 MC28_2943 b50a3dd6400d7f240b28474dca1bb9f9 585 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 174 4.2E-41 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 MC28_0655 273760c4e77731ca0fb9fa5aeda0f852 123 Pfam PF13027 Protein of unknown function (DUF3888) 23 106 2.0E-19 T 14-10-2018 IPR024984 Protein of unknown function DUF3888 MC28_F118 cc4f2e0a99d5f00f273329a8506c1081 294 Gene3D G3DSA:3.40.50.10490 96 273 1.9E-30 T 14-10-2018 MC28_F118 cc4f2e0a99d5f00f273329a8506c1081 294 SUPERFAMILY SSF46689 11 72 1.65E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_F118 cc4f2e0a99d5f00f273329a8506c1081 294 Pfam PF01380 SIS domain 144 254 3.6E-13 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 MC28_F118 cc4f2e0a99d5f00f273329a8506c1081 294 SUPERFAMILY SSF53697 98 258 2.22E-25 T 14-10-2018 MC28_F118 cc4f2e0a99d5f00f273329a8506c1081 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 68 1.9E-9 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 MC28_F118 cc4f2e0a99d5f00f273329a8506c1081 294 Gene3D G3DSA:1.10.10.10 1 73 2.0E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 SUPERFAMILY SSF46785 24 97 4.26E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 Gene3D G3DSA:1.20.120.530 109 238 4.1E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 SMART SM00895 114 238 5.8E-16 T 14-10-2018 IPR011711 GntR, C-terminal MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 67 83 4.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 67 4.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 SMART SM00345 34 93 5.3E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 SUPERFAMILY SSF48008 112 236 8.11E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 Gene3D G3DSA:1.10.10.10 27 97 8.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 93 2.5E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_F260 f4e3ff2e396cacb49ea1fedb0ab8a0f7 239 Pfam PF07729 FCD domain 115 232 5.9E-22 T 14-10-2018 IPR011711 GntR, C-terminal MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 Gene3D G3DSA:1.10.10.350 422 516 2.6E-12 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 Gene3D G3DSA:3.40.50.620 3 271 6.7E-101 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 Gene3D G3DSA:2.30.30.300 169 214 6.7E-101 T 14-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 Gene3D G3DSA:1.10.10.860 272 319 3.3E-17 T 14-10-2018 MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 1 513 1.9E-127 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 29 38 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 SUPERFAMILY SSF52374 2 314 8.58E-61 T 14-10-2018 MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 Pfam PF01921 tRNA synthetases class I (K) 1 349 1.1E-122 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 SUPERFAMILY SSF48163 323 516 1.96E-17 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 MC28_1790 f419b3dfc05018a3a9b4d69cdc61e7bd 517 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 1 517 29.51 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 MC28_0730 4175af95e31f225acf484ec676f8b398 324 SUPERFAMILY SSF53774 2 322 2.22E-104 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 MC28_0730 4175af95e31f225acf484ec676f8b398 324 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.4E-18 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 MC28_0730 4175af95e31f225acf484ec676f8b398 324 PRINTS PR00139 Asparaginase/glutaminase family signature 80 98 2.4E-18 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 MC28_0730 4175af95e31f225acf484ec676f8b398 324 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 2.4E-18 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 MC28_0730 4175af95e31f225acf484ec676f8b398 324 Gene3D G3DSA:3.40.50.40 209 322 3.0E-32 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 MC28_0730 4175af95e31f225acf484ec676f8b398 324 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 MC28_0730 4175af95e31f225acf484ec676f8b398 324 SMART SM00870 3 318 6.6E-146 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 MC28_0730 4175af95e31f225acf484ec676f8b398 324 Gene3D G3DSA:3.40.50.1170 1 208 3.5E-67 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 MC28_0730 4175af95e31f225acf484ec676f8b398 324 PIRSF PIRSF500176 1 324 1.4E-94 T 14-10-2018 MC28_0730 4175af95e31f225acf484ec676f8b398 324 Pfam PF00710 Asparaginase, N-terminal 3 191 7.1E-61 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 MC28_0730 4175af95e31f225acf484ec676f8b398 324 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 81 91 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 MC28_0730 4175af95e31f225acf484ec676f8b398 324 PIRSF PIRSF001220 1 324 2.1E-99 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 MC28_3430 12c8ce19b61f3343112a45024559dffa 214 Gene3D G3DSA:3.30.70.260 142 214 9.8E-16 T 14-10-2018 MC28_3430 12c8ce19b61f3343112a45024559dffa 214 Pfam PF03315 Serine dehydratase beta chain 7 73 1.0E-13 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 MC28_3430 12c8ce19b61f3343112a45024559dffa 214 SUPERFAMILY SSF55021 131 212 1.34E-16 T 14-10-2018 MC28_3430 12c8ce19b61f3343112a45024559dffa 214 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 201 9.6E-79 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 MC28_3430 12c8ce19b61f3343112a45024559dffa 214 PIRSF PIRSF036692 1 214 4.4E-104 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 MC28_3430 12c8ce19b61f3343112a45024559dffa 214 Gene3D G3DSA:3.30.1330.90 8 131 4.0E-22 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 MC28_3430 12c8ce19b61f3343112a45024559dffa 214 Pfam PF01842 ACT domain 144 202 1.3E-11 T 14-10-2018 IPR002912 ACT domain MC28_3430 12c8ce19b61f3343112a45024559dffa 214 SUPERFAMILY SSF143548 14 132 3.14E-32 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 MC28_1498 1be352e55bf720dd98746e9ea806006a 311 SUPERFAMILY SSF52980 11 204 5.9E-46 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 MC28_1498 1be352e55bf720dd98746e9ea806006a 311 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 13 161 1.2E-38 T 14-10-2018 IPR017482 Putative phage-type endonuclease MC28_1498 1be352e55bf720dd98746e9ea806006a 311 Pfam PF09588 YqaJ-like viral recombinase domain 16 151 9.7E-34 T 14-10-2018 IPR019080 YqaJ viral recombinase MC28_1498 1be352e55bf720dd98746e9ea806006a 311 Gene3D G3DSA:3.90.320.10 13 198 2.3E-43 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal MC28_2240 567c269c45b33ffae666bc7b1d8593b1 146 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 144 1.1E-41 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 MC28_2240 567c269c45b33ffae666bc7b1d8593b1 146 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 146 28.329 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 MC28_4604 d3bc8f599d6dd0bf55aeb2b9e53e2258 275 SUPERFAMILY SSF53335 3 274 8.49E-89 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4604 d3bc8f599d6dd0bf55aeb2b9e53e2258 275 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 275 42.311 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 MC28_4604 d3bc8f599d6dd0bf55aeb2b9e53e2258 275 Gene3D G3DSA:3.40.50.150 53 274 7.4E-78 T 14-10-2018 MC28_4604 d3bc8f599d6dd0bf55aeb2b9e53e2258 275 Pfam PF01564 Spermine/spermidine synthase domain 58 236 1.1E-68 T 14-10-2018 MC28_4604 d3bc8f599d6dd0bf55aeb2b9e53e2258 275 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 MC28_4604 d3bc8f599d6dd0bf55aeb2b9e53e2258 275 TIGRFAM TIGR00417 speE: spermidine synthase 4 269 1.9E-120 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 MC28_4604 d3bc8f599d6dd0bf55aeb2b9e53e2258 275 Pfam PF17284 Spermidine synthase tetramerisation domain 3 55 7.2E-20 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 MC28_4604 d3bc8f599d6dd0bf55aeb2b9e53e2258 275 Gene3D G3DSA:2.30.140.10 1 52 1.2E-24 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 MC28_5289 da2f9ab0be3d3922e3877983eda05605 357 Pfam PF00005 ABC transporter 19 161 4.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5289 da2f9ab0be3d3922e3877983eda05605 357 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_5289 da2f9ab0be3d3922e3877983eda05605 357 Gene3D G3DSA:2.40.50.140 284 336 2.4E-25 T 14-10-2018 MC28_5289 da2f9ab0be3d3922e3877983eda05605 357 Gene3D G3DSA:2.40.50.940 222 345 2.4E-25 T 14-10-2018 MC28_5289 da2f9ab0be3d3922e3877983eda05605 357 SMART SM00382 28 211 5.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5289 da2f9ab0be3d3922e3877983eda05605 357 Gene3D G3DSA:3.40.50.300 1 221 6.6E-67 T 14-10-2018 MC28_5289 da2f9ab0be3d3922e3877983eda05605 357 SUPERFAMILY SSF50331 236 352 4.62E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal MC28_5289 da2f9ab0be3d3922e3877983eda05605 357 SUPERFAMILY SSF52540 1 241 3.74E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0303 048492dec2e4fd7e7447d9552cf129c2 311 ProSitePatterns PS00534 Ferrochelatase signature. 177 195 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 MC28_0303 048492dec2e4fd7e7447d9552cf129c2 311 Gene3D G3DSA:3.40.50.1400 147 288 2.2E-108 T 14-10-2018 MC28_0303 048492dec2e4fd7e7447d9552cf129c2 311 TIGRFAM TIGR00109 hemH: ferrochelatase 2 307 1.5E-94 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 MC28_0303 048492dec2e4fd7e7447d9552cf129c2 311 Gene3D G3DSA:3.40.50.1400 7 303 2.2E-108 T 14-10-2018 MC28_0303 048492dec2e4fd7e7447d9552cf129c2 311 Pfam PF00762 Ferrochelatase 4 306 2.7E-81 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 MC28_0303 048492dec2e4fd7e7447d9552cf129c2 311 Hamap MF_00323 Ferrochelatase [hemH]. 3 307 30.288 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 MC28_0303 048492dec2e4fd7e7447d9552cf129c2 311 SUPERFAMILY SSF53800 2 305 1.31E-86 T 14-10-2018 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 PIRSF PIRSF038928 6 394 4.6E-153 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 PIRSF PIRSF038928 385 459 1.3E-9 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 ProSitePatterns PS00438 Catalase proximal active site signature. 54 70 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 Pfam PF00199 Catalase 28 384 1.1E-131 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 Gene3D G3DSA:2.40.180.10 17 459 2.2E-156 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 PRINTS PR00067 Catalase signature 115 132 3.2E-51 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 PRINTS PR00067 Catalase signature 94 112 3.2E-51 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 PRINTS PR00067 Catalase signature 134 152 3.2E-51 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 PRINTS PR00067 Catalase signature 331 357 3.2E-51 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 PRINTS PR00067 Catalase signature 31 54 3.2E-51 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 PRINTS PR00067 Catalase signature 299 326 3.2E-51 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 Pfam PF06628 Catalase-related immune-responsive 395 455 3.4E-14 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 SUPERFAMILY SSF56634 27 456 1.16E-152 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2206 9a16544d285f11e0eb7fee56ccbe9099 459 SMART SM01060 16 393 1.4E-178 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 155 167 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 Gene3D G3DSA:2.40.110.10 152 257 2.4E-33 T 14-10-2018 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 259 421 1.3E-35 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 SUPERFAMILY SSF56645 28 269 2.09E-70 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 Gene3D G3DSA:1.20.140.10 429 600 1.2E-60 T 14-10-2018 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 Gene3D G3DSA:1.10.540.10 5 151 5.8E-48 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 Gene3D G3DSA:1.20.140.10 258 428 9.0E-54 T 14-10-2018 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 SUPERFAMILY SSF47203 263 428 3.38E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 149 4.1E-29 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 384 403 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_4271 5b423aa73d046b084731ca7c24f30400 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 153 245 1.9E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 MC28_G325 949ad1d98523af6b0ee9e8b074840048 373 Pfam PF07282 Putative transposase DNA-binding domain 289 359 4.1E-25 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_G325 949ad1d98523af6b0ee9e8b074840048 373 Pfam PF12323 Helix-turn-helix domain 2 48 3.6E-20 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain MC28_G325 949ad1d98523af6b0ee9e8b074840048 373 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 316 2.5E-15 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_G325 949ad1d98523af6b0ee9e8b074840048 373 Pfam PF01385 Probable transposase 166 275 3.3E-24 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 MC28_1918 be669aef91912aefe6461cf67c869fcf 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 212 1.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1918 be669aef91912aefe6461cf67c869fcf 214 SMART SM00448 1 107 3.5E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1918 be669aef91912aefe6461cf67c869fcf 214 Pfam PF00072 Response regulator receiver domain 1 107 1.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1918 be669aef91912aefe6461cf67c869fcf 214 Gene3D G3DSA:3.40.50.2300 1 119 6.7E-38 T 14-10-2018 MC28_1918 be669aef91912aefe6461cf67c869fcf 214 Gene3D G3DSA:1.10.10.10 120 214 1.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1918 be669aef91912aefe6461cf67c869fcf 214 SMART SM00862 141 212 4.7E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1918 be669aef91912aefe6461cf67c869fcf 214 SUPERFAMILY SSF52172 1 173 7.62E-41 T 14-10-2018 IPR011006 CheY-like superfamily MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 Gene3D G3DSA:2.10.10.20 604 651 3.7E-7 T 14-10-2018 MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 SUPERFAMILY SSF51055 602 636 1.09E-5 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 PRINTS PR00723 Subtilisin serine protease family (S8) signature 297 313 5.4E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 PRINTS PR00723 Subtilisin serine protease family (S8) signature 110 123 5.4E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 PRINTS PR00723 Subtilisin serine protease family (S8) signature 76 95 5.4E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 SUPERFAMILY SSF49265 509 598 1.17E-13 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 298 308 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 SUPERFAMILY SSF52743 58 336 4.58E-36 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 Pfam PF00082 Subtilase family 103 341 5.9E-18 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 SMART SM00495 604 650 0.0023 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 Gene3D G3DSA:3.40.50.200 41 356 1.3E-34 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 Gene3D G3DSA:2.60.40.10 511 597 2.6E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 SMART SM00060 513 586 2.5E-8 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_G310 a117a7db95b61f03c74e541efe5853b1 653 Pfam PF03272 Putative mucin or carbohydrate-binding module 384 497 5.9E-29 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_4832 1eb48b86857d2cdaf3958ecbace7a682 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 7.9E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 MC28_4832 1eb48b86857d2cdaf3958ecbace7a682 122 Gene3D G3DSA:2.40.150.20 1 122 4.4E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_4832 1eb48b86857d2cdaf3958ecbace7a682 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.791 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 MC28_4832 1eb48b86857d2cdaf3958ecbace7a682 122 SMART SM01374 1 122 1.9E-86 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 MC28_4832 1eb48b86857d2cdaf3958ecbace7a682 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4832 1eb48b86857d2cdaf3958ecbace7a682 122 SUPERFAMILY SSF50193 1 122 3.01E-50 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_4832 1eb48b86857d2cdaf3958ecbace7a682 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.8E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 MC28_G095 3277709fc98463e8abd79cde02b791d5 232 Pfam PF09234 Domain of unknown function (DUF1963) 31 217 3.9E-7 T 14-10-2018 IPR015315 Protein of unknown function DUF1963 MC28_G095 3277709fc98463e8abd79cde02b791d5 232 Gene3D G3DSA:2.30.320.10 3 222 4.5E-7 T 14-10-2018 IPR035948 YwqG-like superfamily MC28_G095 3277709fc98463e8abd79cde02b791d5 232 SUPERFAMILY SSF103032 21 203 2.75E-10 T 14-10-2018 IPR035948 YwqG-like superfamily MC28_4884 e4677b9d12615defd854575aebf8ae66 419 PRINTS PR01035 Tetracycline resistance protein signature 89 113 2.1E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4884 e4677b9d12615defd854575aebf8ae66 419 PRINTS PR01035 Tetracycline resistance protein signature 176 196 2.1E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4884 e4677b9d12615defd854575aebf8ae66 419 PRINTS PR01035 Tetracycline resistance protein signature 289 310 2.1E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4884 e4677b9d12615defd854575aebf8ae66 419 PRINTS PR01035 Tetracycline resistance protein signature 116 137 2.1E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4884 e4677b9d12615defd854575aebf8ae66 419 PRINTS PR01035 Tetracycline resistance protein signature 32 48 2.1E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4884 e4677b9d12615defd854575aebf8ae66 419 Pfam PF07690 Major Facilitator Superfamily 29 368 7.1E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_4884 e4677b9d12615defd854575aebf8ae66 419 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 20 401 6.5E-108 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 MC28_4884 e4677b9d12615defd854575aebf8ae66 419 SUPERFAMILY SSF103473 13 407 3.53E-71 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4884 e4677b9d12615defd854575aebf8ae66 419 Gene3D G3DSA:1.20.1720.10 22 401 5.0E-107 T 14-10-2018 MC28_2269 71e8cdfd6f19b2daf8c810ae26d337aa 250 Pfam PF01614 Bacterial transcriptional regulator 119 244 4.8E-33 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal MC28_2269 71e8cdfd6f19b2daf8c810ae26d337aa 250 Gene3D G3DSA:3.30.450.40 76 249 8.0E-49 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_2269 71e8cdfd6f19b2daf8c810ae26d337aa 250 SUPERFAMILY SSF55781 60 248 4.9E-44 T 14-10-2018 MC28_2269 71e8cdfd6f19b2daf8c810ae26d337aa 250 Gene3D G3DSA:1.10.10.10 4 75 1.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2269 71e8cdfd6f19b2daf8c810ae26d337aa 250 SUPERFAMILY SSF46785 6 75 1.18E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2269 71e8cdfd6f19b2daf8c810ae26d337aa 250 SMART SM00346 4 92 6.1E-22 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 MC28_2269 71e8cdfd6f19b2daf8c810ae26d337aa 250 Pfam PF09339 IclR helix-turn-helix domain 7 55 9.1E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 MC28_3479 6280a5f7196d8947f91c3822ebcced0c 219 Gene3D G3DSA:3.30.300.270 103 218 7.8E-35 T 14-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily MC28_3479 6280a5f7196d8947f91c3822ebcced0c 219 Pfam PF12685 SpoIIIAH-like protein 5 206 7.0E-38 T 14-10-2018 IPR024232 Stage III sporulation protein AH-like MC28_4233 a92c3f04979ada63154ad71792213fbb 244 SUPERFAMILY SSF89082 156 242 2.88E-30 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain MC28_4233 a92c3f04979ada63154ad71792213fbb 244 SMART SM00422 3 72 5.0E-28 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4233 a92c3f04979ada63154ad71792213fbb 244 Gene3D G3DSA:1.10.490.50 155 243 4.3E-23 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain MC28_4233 a92c3f04979ada63154ad71792213fbb 244 SUPERFAMILY SSF46955 3 114 9.52E-31 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_4233 a92c3f04979ada63154ad71792213fbb 244 Gene3D G3DSA:1.10.1660.10 1 139 4.1E-53 T 14-10-2018 MC28_4233 a92c3f04979ada63154ad71792213fbb 244 Pfam PF07739 TipAS antibiotic-recognition domain 130 238 2.7E-33 T 14-10-2018 IPR012925 TipAS antibiotic-recognition domain MC28_4233 a92c3f04979ada63154ad71792213fbb 244 Pfam PF13411 MerR HTH family regulatory protein 3 69 9.6E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 255 8.3E-44 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 PIRSF PIRSF002811 2 598 2.0E-185 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 6.8E-152 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 Gene3D G3DSA:3.90.980.10 114 243 8.3E-47 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 Gene3D G3DSA:3.90.580.10 1 102 4.5E-42 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 SMART SM00400 36 90 3.7E-34 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 Gene3D G3DSA:3.40.1360.10 244 367 9.5E-41 T 14-10-2018 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 Gene3D G3DSA:1.10.860.10 463 558 1.9E-21 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 SMART SM00493 262 333 1.2E-18 T 14-10-2018 IPR006171 TOPRIM domain MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 Pfam PF13155 Toprim-like 265 349 8.1E-20 T 14-10-2018 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 Pfam PF01807 CHC2 zinc finger 6 98 1.0E-37 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 SMART SM00766 466 591 8.5E-18 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 SUPERFAMILY SSF57783 4 97 6.29E-36 T 14-10-2018 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 Pfam PF10410 DnaB-helicase binding domain of primase 371 420 2.7E-6 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 SUPERFAMILY SSF56731 118 425 7.72E-105 T 14-10-2018 MC28_3585 b0d9a6766477a36b8308d3d2ac0a651a 598 Hamap MF_00974 DNA primase [dnaG]. 4 589 29.232 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 MC28_3028 9797cbb6abff7cb253dc06b3bf7df65d 83 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 5.7E-27 T 14-10-2018 IPR014238 Sporulation protein YlmC/YmxH MC28_3028 9797cbb6abff7cb253dc06b3bf7df65d 83 Pfam PF05239 PRC-barrel domain 1 76 1.5E-11 T 14-10-2018 IPR027275 PRC-barrel domain MC28_3028 9797cbb6abff7cb253dc06b3bf7df65d 83 Gene3D G3DSA:2.30.30.240 1 77 7.7E-7 T 14-10-2018 MC28_3028 9797cbb6abff7cb253dc06b3bf7df65d 83 SUPERFAMILY SSF50346 1 74 2.59E-10 T 14-10-2018 IPR011033 PRC-barrel-like superfamily MC28_3928 e2d7f507ff59641718100859c71a484e 279 SUPERFAMILY SSF53850 88 266 5.79E-23 T 14-10-2018 MC28_3928 e2d7f507ff59641718100859c71a484e 279 Pfam PF03466 LysR substrate binding domain 93 266 4.6E-23 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_3928 e2d7f507ff59641718100859c71a484e 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_3928 e2d7f507ff59641718100859c71a484e 279 SUPERFAMILY SSF46785 1 86 3.97E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3928 e2d7f507ff59641718100859c71a484e 279 Gene3D G3DSA:3.40.190.10 158 260 5.7E-25 T 14-10-2018 MC28_3928 e2d7f507ff59641718100859c71a484e 279 Gene3D G3DSA:1.10.10.10 1 91 1.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3928 e2d7f507ff59641718100859c71a484e 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_3928 e2d7f507ff59641718100859c71a484e 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_3928 e2d7f507ff59641718100859c71a484e 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_3928 e2d7f507ff59641718100859c71a484e 279 Gene3D G3DSA:3.40.190.10 94 266 5.7E-25 T 14-10-2018 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 675 691 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Pfam PF05188 MutS domain II 119 237 9.2E-7 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Gene3D G3DSA:1.10.1420.10 250 545 6.0E-100 T 14-10-2018 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Pfam PF05190 MutS family domain IV 413 504 9.6E-27 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 SMART SM00534 594 781 1.8E-117 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Gene3D G3DSA:3.40.50.300 554 863 7.4E-102 T 14-10-2018 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Pfam PF01624 MutS domain I 1 109 5.8E-45 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 873 25.121 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Pfam PF00488 MutS domain V 598 784 4.2E-84 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 SUPERFAMILY SSF53150 108 264 1.44E-28 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 SUPERFAMILY SSF48334 251 550 1.57E-86 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 794 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 SMART SM00533 268 577 7.0E-99 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 SUPERFAMILY SSF55271 1 106 9.55E-40 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Gene3D G3DSA:3.30.420.110 118 245 2.3E-11 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 PIRSF PIRSF037677 163 831 2.1E-128 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 PIRSF PIRSF037677 1 172 1.5E-27 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Gene3D G3DSA:1.10.1420.10 385 521 6.0E-100 T 14-10-2018 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 SUPERFAMILY SSF52540 553 785 8.99E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Pfam PF05192 MutS domain III 255 545 6.3E-44 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 MC28_2938 64464016d4d5a0e37e3026255e9a4d3f 884 Gene3D G3DSA:3.40.1170.10 1 111 1.1E-45 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 2.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 2.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 Gene3D G3DSA:3.90.1150.10 122 480 6.5E-104 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 3.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 SMART SM00345 21 80 4.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 Gene3D G3DSA:1.10.10.10 14 98 2.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 SUPERFAMILY SSF46785 14 84 8.52E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 SUPERFAMILY SSF53383 112 480 2.58E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 Gene3D G3DSA:3.40.640.10 157 376 6.5E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1193 f1aa6feb0e761d0e0384491841c17f3e 481 Pfam PF00155 Aminotransferase class I and II 123 474 2.7E-33 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_4109 ec04959d2472604d54e92564ba3be3bf 256 Pfam PF00005 ABC transporter 24 172 3.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4109 ec04959d2472604d54e92564ba3be3bf 256 SUPERFAMILY SSF52540 4 226 3.1E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4109 ec04959d2472604d54e92564ba3be3bf 256 Gene3D G3DSA:3.40.50.300 1 248 2.2E-64 T 14-10-2018 MC28_4109 ec04959d2472604d54e92564ba3be3bf 256 SMART SM00382 33 221 3.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1475 8cd9fbf2020f106d3fe4e5b17e29371b 59 Pfam PF14162 YozD-like protein 1 56 6.5E-30 T 14-10-2018 IPR025545 YozD-like protein MC28_1475 8cd9fbf2020f106d3fe4e5b17e29371b 59 ProDom PD052277 YOZD 1 56 1.0E-23 T 14-10-2018 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 4714 4765 6.6E-15 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3137 3188 1.9E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1674 1725 2.2E-20 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 4061 4112 4.7E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2607 2659 1.6E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1806 1857 3.1E-17 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2739 2790 8.2E-17 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2479 2531 8.2E-21 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1954 1993 4.8E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3401 3453 2.6E-15 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 488 540 2.2E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2215 2267 6.3E-17 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3797 3849 6.3E-15 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3929 3981 2.1E-16 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 4846 4897 1.0E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3003 3054 2.1E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 4326 4370 8.8E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3533 3584 4.4E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 883 935 2.7E-17 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1146 1197 1.3E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 4450 4501 2.9E-17 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 620 671 4.1E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1410 1461 7.5E-19 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2871 2922 1.9E-17 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2347 2399 8.1E-19 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 4193 4245 3.3E-14 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2083 2134 9.4E-20 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3271 3321 6.2E-13 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1542 1594 2.8E-15 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 752 804 2.0E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1278 1330 3.3E-17 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 356 408 1.6E-19 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1014 1066 5.6E-14 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 4582 4634 3.5E-15 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3665 3717 3.4E-17 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 2479 2562 5.0E-13 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 355 450 5.6E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 3533 3620 4.6E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 3005 3088 7.4E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 2346 2436 2.3E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 1672 1761 1.1E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 2614 2692 3.2E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 1146 1229 1.8E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 750 844 1.1E-13 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 2870 2955 1.2E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 4582 4676 2.3E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 1805 1895 8.4E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 3796 3890 8.3E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 3272 3359 1.1E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 3663 3754 7.8E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 3136 3232 1.0E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 4060 4145 4.4E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 619 710 4.4E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 1278 1371 1.5E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 882 968 3.7E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 1541 1635 7.8E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 4450 4545 1.5E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 2214 2301 4.7E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 4712 4807 2.0E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 1409 1498 5.1E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 4193 4286 2.5E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 3402 3486 2.2E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 487 576 1.5E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 1013 1101 5.0E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Pfam PF01345 Domain of unknown function DUF11 2083 2167 1.7E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Gene3D G3DSA:2.60.40.740 2075 2209 4.5E-7 T 14-10-2018 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Gene3D G3DSA:2.60.40.740 1529 1665 2.5E-6 T 14-10-2018 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Gene3D G3DSA:2.60.40.740 2454 2579 4.6E-6 T 14-10-2018 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 Gene3D G3DSA:2.60.40.740 350 477 2.2E-5 T 14-10-2018 MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 SUPERFAMILY SSF49401 3146 3236 9.94E-5 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_0837 6c18e28d7bce78d65e25c0458e7a5ed1 5010 SUPERFAMILY SSF49401 3408 3501 8.2E-5 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_G171 c31c893e54bca6a50cec33a8a8c560b4 460 Pfam PF12697 Alpha/beta hydrolase family 194 423 4.6E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_G171 c31c893e54bca6a50cec33a8a8c560b4 460 SUPERFAMILY SSF53474 150 457 1.18E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_G171 c31c893e54bca6a50cec33a8a8c560b4 460 Gene3D G3DSA:3.40.50.1820 174 437 1.5E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1942 2b23be4956ab2866d189383432044dff 178 PIRSF PIRSF008502 1 178 1.4E-61 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 MC28_1942 2b23be4956ab2866d189383432044dff 178 Gene3D G3DSA:3.30.70.1280 1 88 5.4E-32 T 14-10-2018 MC28_1942 2b23be4956ab2866d189383432044dff 178 Pfam PF08002 Protein of unknown function (DUF1697) 1 137 9.8E-43 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 MC28_1942 2b23be4956ab2866d189383432044dff 178 SUPERFAMILY SSF160379 1 175 1.83E-51 T 14-10-2018 MC28_0977 7928476f1345333925980e993536e141 415 Pfam PF04286 Protein of unknown function (DUF445) 40 415 5.6E-85 T 14-10-2018 IPR007383 Protein of unknown function DUF445 MC28_5402 5a8214b612e2c8f5f29ee5c8b4449f33 333 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 40 288 8.9E-16 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase MC28_5402 5a8214b612e2c8f5f29ee5c8b4449f33 333 TIGRFAM TIGR03395 sphingomy: sphingomyelin phosphodiesterase 37 330 3.5E-143 T 14-10-2018 IPR017766 Sphingomyelinase C/phospholipase C GO:0005576|GO:0008081 MC28_5402 5a8214b612e2c8f5f29ee5c8b4449f33 333 Gene3D G3DSA:3.60.10.10 29 333 2.1E-101 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_5402 5a8214b612e2c8f5f29ee5c8b4449f33 333 SUPERFAMILY SSF56219 34 330 2.49E-79 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_0574 47291dcef99a8dd90e0179a7056ad8ff 168 SUPERFAMILY SSF55620 30 137 3.04E-28 T 14-10-2018 MC28_0574 47291dcef99a8dd90e0179a7056ad8ff 168 Pfam PF14489 QueF-like protein 65 143 1.2E-35 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 MC28_0574 47291dcef99a8dd90e0179a7056ad8ff 168 Gene3D G3DSA:3.30.1130.10 24 168 8.9E-69 T 14-10-2018 MC28_0574 47291dcef99a8dd90e0179a7056ad8ff 168 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 30 141 9.6E-57 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 MC28_0574 47291dcef99a8dd90e0179a7056ad8ff 168 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 168 72.247 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 MC28_0574 47291dcef99a8dd90e0179a7056ad8ff 168 PIRSF PIRSF027377 11 150 1.1E-62 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 MC28_2947 846f934f7e6a81474e75644647ad056e 521 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 9 521 1.7E-246 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 MC28_2947 846f934f7e6a81474e75644647ad056e 521 Gene3D G3DSA:1.10.3210.10 319 473 2.6E-19 T 14-10-2018 MC28_2947 846f934f7e6a81474e75644647ad056e 521 Pfam PF12072 Domain of unknown function (DUF3552) 7 206 7.9E-77 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal MC28_2947 846f934f7e6a81474e75644647ad056e 521 Pfam PF00013 KH domain 214 268 3.5E-6 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 MC28_2947 846f934f7e6a81474e75644647ad056e 521 Pfam PF01966 HD domain 338 429 4.1E-19 T 14-10-2018 IPR006674 HD domain MC28_2947 846f934f7e6a81474e75644647ad056e 521 SUPERFAMILY SSF109604 317 468 1.59E-30 T 14-10-2018 MC28_2947 846f934f7e6a81474e75644647ad056e 521 Hamap MF_00335 Ribonuclease Y [rny]. 6 521 25.903 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 MC28_2947 846f934f7e6a81474e75644647ad056e 521 SUPERFAMILY SSF54791 209 305 3.23E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 MC28_2947 846f934f7e6a81474e75644647ad056e 521 SMART SM00471 333 439 4.7E-14 T 14-10-2018 IPR003607 HD/PDEase domain MC28_2947 846f934f7e6a81474e75644647ad056e 521 SMART SM00322 209 276 1.1E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 MC28_2947 846f934f7e6a81474e75644647ad056e 521 TIGRFAM TIGR00277 HDIG: HDIG domain 333 410 3.1E-26 T 14-10-2018 IPR006675 HDIG domain MC28_2947 846f934f7e6a81474e75644647ad056e 521 Gene3D G3DSA:3.30.1370.10 208 304 1.1E-8 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 MC28_0543 3c317f573742fad6808b69d03993eefc 150 TIGRFAM TIGR02719 repress_PhaQ: poly-beta-hydroxybutyrate-responsive repressor 4 141 4.3E-86 T 14-10-2018 IPR014091 Transcriptional repressor poly-beta-hydroxybutyrate-responsive MC28_0543 3c317f573742fad6808b69d03993eefc 150 SUPERFAMILY SSF46785 15 121 8.44E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0543 3c317f573742fad6808b69d03993eefc 150 Gene3D G3DSA:1.10.10.10 15 127 1.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0543 3c317f573742fad6808b69d03993eefc 150 Pfam PF03551 Transcriptional regulator PadR-like family 32 103 3.7E-18 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_3974 4f45a74b4520cbcab04bf689942e8244 104 Pfam PF00085 Thioredoxin 10 101 6.8E-17 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 MC28_3974 4f45a74b4520cbcab04bf689942e8244 104 Gene3D G3DSA:3.40.30.10 1 102 1.5E-23 T 14-10-2018 MC28_3974 4f45a74b4520cbcab04bf689942e8244 104 SUPERFAMILY SSF52833 4 102 3.09E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_3175 42886c22ca718eec8645762395b46725 120 Pfam PF01844 HNH endonuclease 46 95 3.0E-12 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 MC28_3175 42886c22ca718eec8645762395b46725 120 SMART SM00507 33 91 8.9E-4 T 14-10-2018 IPR003615 HNH nuclease MC28_0369 c94b44826b6ee4d47543e0e3c542ccc7 396 Pfam PF00202 Aminotransferase class-III 15 395 1.6E-134 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0369 c94b44826b6ee4d47543e0e3c542ccc7 396 Gene3D G3DSA:3.40.640.10 58 306 2.3E-156 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_0369 c94b44826b6ee4d47543e0e3c542ccc7 396 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 4 395 2.0E-164 T 14-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 MC28_0369 c94b44826b6ee4d47543e0e3c542ccc7 396 Hamap MF_01689 Ornithine aminotransferase [rocD]. 4 396 68.12 T 14-10-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 MC28_0369 c94b44826b6ee4d47543e0e3c542ccc7 396 Gene3D G3DSA:3.90.1150.10 23 385 2.3E-156 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_0369 c94b44826b6ee4d47543e0e3c542ccc7 396 SUPERFAMILY SSF53383 3 395 1.06E-125 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0369 c94b44826b6ee4d47543e0e3c542ccc7 396 PIRSF PIRSF000521 175 396 2.0E-31 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0369 c94b44826b6ee4d47543e0e3c542ccc7 396 PIRSF PIRSF000521 2 160 2.1E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0369 c94b44826b6ee4d47543e0e3c542ccc7 396 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_2282 dd538f3be7d135ff536c1065b5a20863 286 SUPERFAMILY SSF46689 229 280 3.58E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2282 dd538f3be7d135ff536c1065b5a20863 286 Gene3D G3DSA:1.10.10.60 226 283 9.8E-14 T 14-10-2018 MC28_2282 dd538f3be7d135ff536c1065b5a20863 286 SUPERFAMILY SSF46689 181 227 2.39E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2282 dd538f3be7d135ff536c1065b5a20863 286 Gene3D G3DSA:1.10.10.60 178 225 1.2E-15 T 14-10-2018 MC28_2282 dd538f3be7d135ff536c1065b5a20863 286 Gene3D G3DSA:2.60.120.10 22 99 5.2E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_2282 dd538f3be7d135ff536c1065b5a20863 286 SMART SM00342 193 276 4.0E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_2282 dd538f3be7d135ff536c1065b5a20863 286 Pfam PF12833 Helix-turn-helix domain 199 277 2.6E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_2282 dd538f3be7d135ff536c1065b5a20863 286 Pfam PF02311 AraC-like ligand binding domain 34 140 3.7E-12 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 MC28_2282 dd538f3be7d135ff536c1065b5a20863 286 SUPERFAMILY SSF51215 34 162 5.49E-14 T 14-10-2018 IPR037923 Transcription regulator HTH-like MC28_4688 f359b6c4bd0e8785f79c8e10e82b261f 328 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 166 178 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 MC28_4688 f359b6c4bd0e8785f79c8e10e82b261f 328 SMART SM01240 4 328 3.8E-119 T 14-10-2018 MC28_4688 f359b6c4bd0e8785f79c8e10e82b261f 328 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 205 225 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 MC28_4688 f359b6c4bd0e8785f79c8e10e82b261f 328 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 311 1.1E-68 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 MC28_4688 f359b6c4bd0e8785f79c8e10e82b261f 328 Gene3D G3DSA:3.20.20.70 1 328 1.6E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4688 f359b6c4bd0e8785f79c8e10e82b261f 328 SUPERFAMILY SSF51412 4 315 8.24E-94 T 14-10-2018 MC28_4688 f359b6c4bd0e8785f79c8e10e82b261f 328 Hamap MF_01511 GMP reductase [guaC]. 3 326 64.85 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 MC28_4688 f359b6c4bd0e8785f79c8e10e82b261f 328 PIRSF PIRSF036500 1 327 2.3E-200 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 MC28_4688 f359b6c4bd0e8785f79c8e10e82b261f 328 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 5 325 2.5E-205 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 MC28_F252 f35fcd32770c9bbd3ffb102212a050aa 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 4.8E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_F252 f35fcd32770c9bbd3ffb102212a050aa 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 4.8E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_F252 f35fcd32770c9bbd3ffb102212a050aa 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 4.8E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_F252 f35fcd32770c9bbd3ffb102212a050aa 116 Gene3D G3DSA:1.10.10.10 3 98 2.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F252 f35fcd32770c9bbd3ffb102212a050aa 116 SUPERFAMILY SSF46785 3 87 3.16E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_F252 f35fcd32770c9bbd3ffb102212a050aa 116 Pfam PF01022 Bacterial regulatory protein, arsR family 19 62 1.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_F252 f35fcd32770c9bbd3ffb102212a050aa 116 SMART SM00418 11 89 1.5E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3790 ab240a22f32e137a35c8a03e96c32549 261 Gene3D G3DSA:3.30.1330.60 88 259 6.5E-45 T 14-10-2018 IPR036737 OmpA-like domain superfamily MC28_3790 ab240a22f32e137a35c8a03e96c32549 261 Pfam PF00691 OmpA family 147 247 3.1E-16 T 14-10-2018 IPR006665 OmpA-like domain MC28_3790 ab240a22f32e137a35c8a03e96c32549 261 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 8 61 2.5E-21 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain MC28_3790 ab240a22f32e137a35c8a03e96c32549 261 SUPERFAMILY SSF103088 134 256 3.53E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily MC28_2672 c51ffa40ee8728fced771547ca165c38 97 SMART SM00418 19 97 5.8E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2672 c51ffa40ee8728fced771547ca165c38 97 SUPERFAMILY SSF46785 12 95 4.82E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2672 c51ffa40ee8728fced771547ca165c38 97 Gene3D G3DSA:1.10.10.10 2 96 7.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2672 c51ffa40ee8728fced771547ca165c38 97 Pfam PF01022 Bacterial regulatory protein, arsR family 26 66 1.2E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2230 e549b1ed01028608b128a0df936e042f 343 SUPERFAMILY SSF51735 1 317 6.96E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2230 e549b1ed01028608b128a0df936e042f 343 Gene3D G3DSA:3.40.50.720 1 266 8.1E-33 T 14-10-2018 MC28_2230 e549b1ed01028608b128a0df936e042f 343 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 2.8E-10 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_0805 365668b5d9e1921a5ce4376c298a1f84 525 Pfam PF17289 Terminase RNaseH-like domain 355 515 2.9E-8 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like MC28_0805 365668b5d9e1921a5ce4376c298a1f84 525 Pfam PF03237 Terminase-like family 56 230 4.2E-6 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type MC28_0805 365668b5d9e1921a5ce4376c298a1f84 525 Gene3D G3DSA:3.30.420.240 323 525 4.8E-58 T 14-10-2018 MC28_0805 365668b5d9e1921a5ce4376c298a1f84 525 Gene3D G3DSA:3.40.50.300 1 214 9.8E-53 T 14-10-2018 MC28_5215 5ce4e514d877afc02ec17b70cac25448 245 Gene3D G3DSA:3.30.70.660 107 244 3.4E-46 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 MC28_5215 5ce4e514d877afc02ec17b70cac25448 245 Pfam PF01416 tRNA pseudouridine synthase 9 105 7.3E-10 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_5215 5ce4e514d877afc02ec17b70cac25448 245 Pfam PF01416 tRNA pseudouridine synthase 144 245 4.8E-27 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_5215 5ce4e514d877afc02ec17b70cac25448 245 Gene3D G3DSA:3.30.70.580 1 106 1.6E-35 T 14-10-2018 MC28_5215 5ce4e514d877afc02ec17b70cac25448 245 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 240 8.6E-64 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_5215 5ce4e514d877afc02ec17b70cac25448 245 PIRSF PIRSF001430 1 245 1.2E-81 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_5215 5ce4e514d877afc02ec17b70cac25448 245 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 35.799 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_5215 5ce4e514d877afc02ec17b70cac25448 245 SUPERFAMILY SSF55120 1 245 4.6E-78 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 Gene3D G3DSA:3.40.50.720 9 340 1.3E-144 T 14-10-2018 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 PIRSF PIRSF000148 6 348 5.4E-131 T 14-10-2018 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 329 5.5E-59 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 239 253 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 6 343 38.551 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 SUPERFAMILY SSF51735 7 158 2.35E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 SUPERFAMILY SSF55347 131 330 2.51E-75 T 14-10-2018 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 SMART SM00859 8 123 2.1E-44 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 122 1.5E-34 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 Gene3D G3DSA:3.30.360.10 130 326 1.3E-144 T 14-10-2018 MC28_2970 442a283d8173efe261c1e2c7eccedfbb 348 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 8 344 3.7E-161 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 SUPERFAMILY SSF88697 11 201 1.19E-44 T 14-10-2018 IPR015947 PUA-like superfamily MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 SUPERFAMILY SSF54211 595 770 9.1E-56 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 Gene3D G3DSA:3.30.230.10 593 776 1.7E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 Hamap MF_01973 Lon protease [lon]. 11 772 72.967 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 5.1E-98 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 Gene3D G3DSA:1.20.58.1480 120 245 2.4E-41 T 14-10-2018 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 SMART SM00464 10 202 1.9E-68 T 14-10-2018 IPR003111 Lon, substrate-binding domain MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 Gene3D G3DSA:1.10.8.60 492 584 3.6E-33 T 14-10-2018 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 SMART SM00382 348 493 1.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 SUPERFAMILY SSF52540 313 588 4.33E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 Gene3D G3DSA:3.40.50.300 314 491 1.6E-69 T 14-10-2018 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 3.9E-24 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 201 2.3E-40 T 14-10-2018 IPR003111 Lon, substrate-binding domain MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 6.3E-53 T 14-10-2018 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 6.3E-53 T 14-10-2018 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 6.3E-53 T 14-10-2018 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 6.3E-53 T 14-10-2018 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 6.3E-53 T 14-10-2018 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 PIRSF PIRSF001174 1 775 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 Gene3D G3DSA:2.30.130.40 5 117 5.8E-30 T 14-10-2018 MC28_3762 2b03bc212df58e27db7194e47e50c3b5 776 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 MC28_3595 dbf9178b295754ee1e11e29b0d0e8b6e 714 Gene3D G3DSA:1.10.3210.10 473 670 4.3E-24 T 14-10-2018 MC28_3595 dbf9178b295754ee1e11e29b0d0e8b6e 714 Pfam PF01966 HD domain 501 643 5.5E-17 T 14-10-2018 IPR006674 HD domain MC28_3595 dbf9178b295754ee1e11e29b0d0e8b6e 714 SUPERFAMILY SSF109604 500 651 6.28E-13 T 14-10-2018 MC28_3595 dbf9178b295754ee1e11e29b0d0e8b6e 714 Pfam PF07698 7TM receptor with intracellular HD hydrolase 277 476 2.0E-43 T 14-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain MC28_3595 dbf9178b295754ee1e11e29b0d0e8b6e 714 Pfam PF07697 7TM-HD extracellular 51 270 1.4E-32 T 14-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain MC28_3595 dbf9178b295754ee1e11e29b0d0e8b6e 714 TIGRFAM TIGR00277 HDIG: HDIG domain 498 596 2.4E-26 T 14-10-2018 IPR006675 HDIG domain MC28_3595 dbf9178b295754ee1e11e29b0d0e8b6e 714 SMART SM00471 497 653 4.6E-10 T 14-10-2018 IPR003607 HD/PDEase domain MC28_F055 eeab98e21170eea5640df385ba8916d6 54 Gene3D G3DSA:2.20.28.10 1 53 2.1E-26 T 14-10-2018 MC28_F055 eeab98e21170eea5640df385ba8916d6 54 PIRSF PIRSF000071 1 54 5.8E-28 T 14-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 MC28_F055 eeab98e21170eea5640df385ba8916d6 54 SUPERFAMILY SSF57802 1 53 1.6E-23 T 14-10-2018 MC28_F055 eeab98e21170eea5640df385ba8916d6 54 Pfam PF00301 Rubredoxin 3 49 5.4E-23 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 MC28_F055 eeab98e21170eea5640df385ba8916d6 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 MC28_F055 eeab98e21170eea5640df385ba8916d6 54 PRINTS PR00163 Rubredoxin signature 33 49 1.3E-10 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 MC28_F055 eeab98e21170eea5640df385ba8916d6 54 PRINTS PR00163 Rubredoxin signature 3 19 1.3E-10 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 Gene3D G3DSA:3.30.420.40 7 320 1.2E-126 T 14-10-2018 MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 318 7.7E-137 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 2.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 2.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 2.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 2.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 2.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 2.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 Gene3D G3DSA:3.30.420.40 132 298 1.2E-126 T 14-10-2018 MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 SUPERFAMILY SSF53067 6 126 4.21E-33 T 14-10-2018 MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 336 66.469 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 311 4.2E-112 T 14-10-2018 IPR017861 Kae1/TsaD family MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 SUPERFAMILY SSF53067 105 313 9.58E-46 T 14-10-2018 MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 MC28_4949 3ebb315425a2c8eba077d0ed278bb1e4 338 Pfam PF00814 Glycoprotease family 27 311 9.7E-109 T 14-10-2018 IPR000905 Gcp-like domain MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 Gene3D G3DSA:1.20.1720.10 19 221 3.2E-55 T 14-10-2018 MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 362 382 5.9E-6 T 14-10-2018 MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 5.9E-6 T 14-10-2018 MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 80 102 5.9E-6 T 14-10-2018 MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 306 330 5.9E-6 T 14-10-2018 MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 Gene3D G3DSA:1.20.1250.20 270 503 4.2E-20 T 14-10-2018 MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 SUPERFAMILY SSF103473 204 508 6.8E-35 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 494 7.2E-89 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 SUPERFAMILY SSF103473 15 197 1.44E-46 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2067 a34a29c94adfb73ef4caa5bb68162cb6 518 Pfam PF07690 Major Facilitator Superfamily 22 413 1.0E-57 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_E072 b8ec9c64ce7c37510903b4044a7e2f73 39 SUPERFAMILY SSF53041 4 38 5.23E-7 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_E072 b8ec9c64ce7c37510903b4044a7e2f73 39 Gene3D G3DSA:3.40.50.1390 3 39 4.4E-8 T 14-10-2018 MC28_E168 7a0da0c7a0815fc3949824276be5b4f0 151 Pfam PF04471 Restriction endonuclease 2 92 9.9E-23 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 MC28_E168 7a0da0c7a0815fc3949824276be5b4f0 151 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 113 150 1.2E-11 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 MC28_E168 7a0da0c7a0815fc3949824276be5b4f0 151 SUPERFAMILY SSF57783 108 150 8.16E-7 T 14-10-2018 MC28_E168 7a0da0c7a0815fc3949824276be5b4f0 151 SUPERFAMILY SSF52980 3 97 1.93E-17 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 MC28_E168 7a0da0c7a0815fc3949824276be5b4f0 151 Gene3D G3DSA:3.40.1350.10 2 97 2.2E-9 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 MC28_3972 955ce45d6e696537cbc1d05cee1568cf 204 Pfam PF14794 Domain of unknown function (DUF4479) 27 94 2.7E-25 T 14-10-2018 IPR027855 Domain of unknown function DUF4479 MC28_3972 955ce45d6e696537cbc1d05cee1568cf 204 Gene3D G3DSA:2.40.50.140 8 202 1.3E-75 T 14-10-2018 MC28_3972 955ce45d6e696537cbc1d05cee1568cf 204 SUPERFAMILY SSF50249 95 203 4.65E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3972 955ce45d6e696537cbc1d05cee1568cf 204 Gene3D G3DSA:3.30.1940.10 21 95 1.3E-75 T 14-10-2018 IPR037154 YtpR-like superfamily MC28_3972 955ce45d6e696537cbc1d05cee1568cf 204 Pfam PF01588 Putative tRNA binding domain 99 200 2.1E-27 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 MC28_4453 adc13c14a518df6031120ae566fca0a3 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 113 6.6E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_4453 adc13c14a518df6031120ae566fca0a3 126 SUPERFAMILY SSF54593 1 125 1.69E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_4453 adc13c14a518df6031120ae566fca0a3 126 Gene3D G3DSA:3.10.180.10 1 125 2.7E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1809 71ee37315d827cd1d1a6cc13e793b7cd 229 Gene3D G3DSA:1.20.910.10 1 220 8.2E-67 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 MC28_1809 71ee37315d827cd1d1a6cc13e793b7cd 229 Pfam PF03070 TENA/THI-4/PQQC family 9 214 1.2E-57 T 14-10-2018 IPR004305 Thiaminase-2/PQQC MC28_1809 71ee37315d827cd1d1a6cc13e793b7cd 229 SUPERFAMILY SSF48613 3 221 3.56E-74 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 MC28_1809 71ee37315d827cd1d1a6cc13e793b7cd 229 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 214 9.2E-75 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 MC28_0622 5a2b9ea007a78fa76356b0bed77c37cc 184 Gene3D G3DSA:3.40.30.10 2 157 1.3E-17 T 14-10-2018 MC28_0622 5a2b9ea007a78fa76356b0bed77c37cc 184 SUPERFAMILY SSF52833 47 137 1.46E-8 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_0622 5a2b9ea007a78fa76356b0bed77c37cc 184 Pfam PF14595 Thioredoxin 10 138 1.7E-39 T 14-10-2018 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 TIGRFAM TIGR00673 cynS: cyanase 6 149 6.3E-46 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 Gene3D G3DSA:1.10.260.40 1 78 7.2E-27 T 14-10-2018 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 Gene3D G3DSA:3.30.1160.10 81 149 3.0E-27 T 14-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 SUPERFAMILY SSF55234 79 149 1.83E-22 T 14-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 SMART SM01116 75 149 2.4E-31 T 14-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 Pfam PF02560 Cyanate lyase C-terminal domain 78 147 2.7E-27 T 14-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 PRINTS PR01693 Cyanase signature 134 144 1.6E-23 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 PRINTS PR01693 Cyanase signature 14 29 1.6E-23 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 PRINTS PR01693 Cyanase signature 83 97 1.6E-23 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 PRINTS PR01693 Cyanase signature 101 117 1.6E-23 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 PRINTS PR01693 Cyanase signature 34 51 1.6E-23 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 PIRSF PIRSF001263 1 149 5.7E-45 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 SUPERFAMILY SSF47413 1 75 4.35E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_4352 417aa5fab1d928f68dcf3d064cbb3563 149 Hamap MF_00535 Cyanate hydratase [cynS]. 1 149 66.187 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 MC28_F205 f61afa366de795309b2a31bf1897727e 380 Gene3D G3DSA:1.10.443.10 191 379 6.0E-40 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_F205 f61afa366de795309b2a31bf1897727e 380 SUPERFAMILY SSF56349 208 371 4.71E-35 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_F205 f61afa366de795309b2a31bf1897727e 380 Pfam PF00589 Phage integrase family 207 363 6.7E-27 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_F205 f61afa366de795309b2a31bf1897727e 380 Gene3D G3DSA:1.10.150.130 36 165 2.8E-12 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_F205 f61afa366de795309b2a31bf1897727e 380 SUPERFAMILY SSF47823 44 139 4.32E-5 T 14-10-2018 MC28_1292 f5f368c4472327dd7bf22e5fa9deab7e 308 Gene3D G3DSA:3.40.630.30 7 141 5.4E-9 T 14-10-2018 MC28_1292 f5f368c4472327dd7bf22e5fa9deab7e 308 Gene3D G3DSA:3.40.630.30 142 306 1.1E-25 T 14-10-2018 MC28_1292 f5f368c4472327dd7bf22e5fa9deab7e 308 Pfam PF13673 Acetyltransferase (GNAT) domain 68 132 1.5E-7 T 14-10-2018 IPR000182 GNAT domain MC28_1292 f5f368c4472327dd7bf22e5fa9deab7e 308 Pfam PF13673 Acetyltransferase (GNAT) domain 190 295 2.9E-15 T 14-10-2018 IPR000182 GNAT domain MC28_1292 f5f368c4472327dd7bf22e5fa9deab7e 308 SUPERFAMILY SSF55729 23 301 4.31E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2039 f14d81d5e313df3655cf6e56209e43dd 351 SMART SM00922 143 241 3.4E-24 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal MC28_2039 f14d81d5e313df3655cf6e56209e43dd 351 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 9 127 1.7E-19 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain MC28_2039 f14d81d5e313df3655cf6e56209e43dd 351 Pfam PF13378 Enolase C-terminal domain-like 146 328 3.8E-49 T 14-10-2018 IPR029065 Enolase C-terminal domain-like MC28_2039 f14d81d5e313df3655cf6e56209e43dd 351 Gene3D G3DSA:3.20.20.120 119 333 3.3E-109 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily MC28_2039 f14d81d5e313df3655cf6e56209e43dd 351 Gene3D G3DSA:3.30.390.10 9 118 3.3E-109 T 14-10-2018 IPR029017 Enolase-like, N-terminal MC28_2039 f14d81d5e313df3655cf6e56209e43dd 351 SUPERFAMILY SSF51604 130 343 1.03E-63 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily MC28_2039 f14d81d5e313df3655cf6e56209e43dd 351 SUPERFAMILY SSF54826 4 128 7.84E-29 T 14-10-2018 MC28_0193 63a42d4abbcec4de3468212eef5005c4 180 Pfam PF03773 Predicted permease 36 177 3.1E-17 T 14-10-2018 IPR005524 Predicted permease DUF318 MC28_1735 5ae8ef72b7ccb7abbecbe88c799863f2 646 Gene3D G3DSA:3.30.300.30 517 644 1.1E-19 T 14-10-2018 MC28_1735 5ae8ef72b7ccb7abbecbe88c799863f2 646 Pfam PF00501 AMP-binding enzyme 96 521 4.0E-75 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_1735 5ae8ef72b7ccb7abbecbe88c799863f2 646 SUPERFAMILY SSF56801 17 636 3.27E-151 T 14-10-2018 MC28_1735 5ae8ef72b7ccb7abbecbe88c799863f2 646 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 30 85 2.5E-12 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 MC28_1735 5ae8ef72b7ccb7abbecbe88c799863f2 646 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 7.0E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_1735 5ae8ef72b7ccb7abbecbe88c799863f2 646 ProSitePatterns PS00455 Putative AMP-binding domain signature. 264 275 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_1735 5ae8ef72b7ccb7abbecbe88c799863f2 646 Gene3D G3DSA:3.40.50.12780 58 515 8.2E-91 T 14-10-2018 MC28_3443 094140e8031f21de88a85639b08ac691 240 Gene3D G3DSA:3.40.50.300 1 240 8.2E-80 T 14-10-2018 MC28_3443 094140e8031f21de88a85639b08ac691 240 SMART SM00382 26 213 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3443 094140e8031f21de88a85639b08ac691 240 Pfam PF00005 ABC transporter 17 165 2.5E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3443 094140e8031f21de88a85639b08ac691 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3443 094140e8031f21de88a85639b08ac691 240 PIRSF PIRSF039085 1 240 1.5E-114 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 MC28_3443 094140e8031f21de88a85639b08ac691 240 SUPERFAMILY SSF52540 1 235 6.08E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2358 f327222a7b9f771f552bea930460fa56 486 Pfam PF12229 Putative peptidoglycan binding domain 255 332 7.3E-11 T 14-10-2018 IPR022029 Putative peptidoglycan binding domain MC28_2358 f327222a7b9f771f552bea930460fa56 486 Gene3D G3DSA:1.10.269.20 225 345 3.2E-17 T 14-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily MC28_2358 f327222a7b9f771f552bea930460fa56 486 SUPERFAMILY SSF141523 358 486 2.88E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like MC28_2358 f327222a7b9f771f552bea930460fa56 486 SUPERFAMILY SSF143985 226 345 9.02E-30 T 14-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily MC28_2358 f327222a7b9f771f552bea930460fa56 486 Gene3D G3DSA:2.40.440.10 360 486 2.7E-35 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like MC28_2358 f327222a7b9f771f552bea930460fa56 486 Pfam PF03734 L,D-transpeptidase catalytic domain 361 485 1.1E-14 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 MC28_1094 191a915a610e5a102f3058d698c321c9 223 Pfam PF00072 Response regulator receiver domain 4 112 3.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1094 191a915a610e5a102f3058d698c321c9 223 Gene3D G3DSA:1.10.10.10 126 223 1.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1094 191a915a610e5a102f3058d698c321c9 223 SUPERFAMILY SSF46894 126 222 3.4E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_1094 191a915a610e5a102f3058d698c321c9 223 Gene3D G3DSA:3.40.50.2300 1 125 4.0E-31 T 14-10-2018 MC28_1094 191a915a610e5a102f3058d698c321c9 223 SMART SM00448 2 112 4.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1094 191a915a610e5a102f3058d698c321c9 223 SUPERFAMILY SSF52172 1 122 1.28E-33 T 14-10-2018 IPR011006 CheY-like superfamily MC28_1094 191a915a610e5a102f3058d698c321c9 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 1.7E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1094 191a915a610e5a102f3058d698c321c9 223 SMART SM00862 147 222 1.0E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2559 612fd09c33a0e48b5312790044668950 188 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 174 1.1E-27 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain MC28_2559 612fd09c33a0e48b5312790044668950 188 SUPERFAMILY SSF52266 2 187 9.77E-42 T 14-10-2018 MC28_2559 612fd09c33a0e48b5312790044668950 188 Gene3D G3DSA:3.40.50.1110 1 186 1.3E-45 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_3857 51a0d95e6acc6e826df1ed49802ed2fd 312 Pfam PF01695 IstB-like ATP binding protein 160 275 9.4E-13 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 MC28_3857 51a0d95e6acc6e826df1ed49802ed2fd 312 SMART SM00382 161 285 0.0024 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3857 51a0d95e6acc6e826df1ed49802ed2fd 312 Gene3D G3DSA:3.40.50.300 108 304 7.2E-54 T 14-10-2018 MC28_3857 51a0d95e6acc6e826df1ed49802ed2fd 312 SUPERFAMILY SSF52540 151 276 5.7E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3857 51a0d95e6acc6e826df1ed49802ed2fd 312 Pfam PF07319 Primosomal protein DnaI N-terminus 1 98 1.1E-30 T 14-10-2018 IPR009928 Primosomal DnaI, N-terminal MC28_0880 581afe92fd9751c0d418c76954deac51 260 Gene3D G3DSA:3.40.50.150 69 260 6.5E-60 T 14-10-2018 MC28_0880 581afe92fd9751c0d418c76954deac51 260 SUPERFAMILY SSF47757 4 69 3.92E-10 T 14-10-2018 MC28_0880 581afe92fd9751c0d418c76954deac51 260 SUPERFAMILY SSF53335 70 243 6.72E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0880 581afe92fd9751c0d418c76954deac51 260 Pfam PF03705 CheR methyltransferase, all-alpha domain 5 57 1.0E-9 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal MC28_0880 581afe92fd9751c0d418c76954deac51 260 Pfam PF01739 CheR methyltransferase, SAM binding domain 70 245 2.6E-55 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal MC28_0880 581afe92fd9751c0d418c76954deac51 260 PRINTS PR00996 Glutamate methyltransferase family signature 218 241 2.4E-37 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0880 581afe92fd9751c0d418c76954deac51 260 PRINTS PR00996 Glutamate methyltransferase family signature 26 39 2.4E-37 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0880 581afe92fd9751c0d418c76954deac51 260 PRINTS PR00996 Glutamate methyltransferase family signature 63 75 2.4E-37 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0880 581afe92fd9751c0d418c76954deac51 260 PRINTS PR00996 Glutamate methyltransferase family signature 199 213 2.4E-37 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0880 581afe92fd9751c0d418c76954deac51 260 PRINTS PR00996 Glutamate methyltransferase family signature 101 121 2.4E-37 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0880 581afe92fd9751c0d418c76954deac51 260 PRINTS PR00996 Glutamate methyltransferase family signature 133 149 2.4E-37 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0880 581afe92fd9751c0d418c76954deac51 260 SMART SM00138 4 258 1.3E-76 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_2155 1196afad952195f638cdb1821f63f48c 181 Pfam PF03358 NADPH-dependent FMN reductase 6 146 3.9E-29 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 MC28_2155 1196afad952195f638cdb1821f63f48c 181 Gene3D G3DSA:3.40.50.360 1 181 6.7E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_2155 1196afad952195f638cdb1821f63f48c 181 SUPERFAMILY SSF52218 5 175 1.8E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 SUPERFAMILY SSF69360 140 262 1.28E-43 T 14-10-2018 MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Gene3D G3DSA:2.20.120.10 227 270 4.4E-8 T 14-10-2018 MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 SUPERFAMILY SSF69360 33 180 5.2E-56 T 14-10-2018 MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 SMART SM00047 292 422 2.2E-5 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 306 416 7.2E-16 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Gene3D G3DSA:2.10.270.10 94 176 1.1E-34 T 14-10-2018 MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Gene3D G3DSA:2.10.270.10 23 93 8.9E-19 T 14-10-2018 MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 222 238 7.1E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 63 80 1.4E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 182 200 1.5E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 202 220 5.1E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 122 140 1.9E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 42 59 3.4E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 143 160 2.9E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 163 180 1.5E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 82 100 1.1E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Pfam PF01473 Putative cell wall binding repeat 102 120 7.7E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Gene3D G3DSA:2.10.270.10 177 226 2.0E-18 T 14-10-2018 MC28_0470 d3ea4d77c2e93237c13c8cca6f64e891 525 Gene3D G3DSA:1.10.530.10 302 417 6.5E-16 T 14-10-2018 MC28_5026 84d31e0a316e4e534733f968f8138c46 339 SMART SM00930 260 334 9.7E-28 T 14-10-2018 IPR018449 NIL domain MC28_5026 84d31e0a316e4e534733f968f8138c46 339 SUPERFAMILY SSF52540 1 240 8.82E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5026 84d31e0a316e4e534733f968f8138c46 339 Gene3D G3DSA:3.30.70.260 233 335 2.4E-28 T 14-10-2018 MC28_5026 84d31e0a316e4e534733f968f8138c46 339 Gene3D G3DSA:3.40.50.300 1 232 7.4E-79 T 14-10-2018 MC28_5026 84d31e0a316e4e534733f968f8138c46 339 SUPERFAMILY SSF55021 252 329 3.2E-20 T 14-10-2018 MC28_5026 84d31e0a316e4e534733f968f8138c46 339 Pfam PF00005 ABC transporter 22 169 1.8E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5026 84d31e0a316e4e534733f968f8138c46 339 Pfam PF09383 NIL domain 263 326 1.5E-19 T 14-10-2018 IPR018449 NIL domain MC28_5026 84d31e0a316e4e534733f968f8138c46 339 SMART SM00382 30 226 8.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5026 84d31e0a316e4e534733f968f8138c46 339 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0510 caf2689af3e911aaa25781326da76d63 107 SUPERFAMILY SSF47413 2 67 4.22E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_0510 caf2689af3e911aaa25781326da76d63 107 Gene3D G3DSA:1.10.260.40 1 107 4.9E-33 T 14-10-2018 MC28_0510 caf2689af3e911aaa25781326da76d63 107 Pfam PF01381 Helix-turn-helix 6 60 1.4E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0510 caf2689af3e911aaa25781326da76d63 107 SUPERFAMILY SSF47406 72 106 4.97E-14 T 14-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 MC28_0510 caf2689af3e911aaa25781326da76d63 107 SMART SM00530 5 61 2.1E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0510 caf2689af3e911aaa25781326da76d63 107 Pfam PF08671 Anti-repressor SinI 72 99 7.1E-16 T 14-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 MC28_5414 2a01179cad573848fd54e0f73030bc12 461 Gene3D G3DSA:1.20.1250.20 238 461 1.1E-59 T 14-10-2018 MC28_5414 2a01179cad573848fd54e0f73030bc12 461 Gene3D G3DSA:1.20.1250.20 2 237 2.3E-78 T 14-10-2018 MC28_5414 2a01179cad573848fd54e0f73030bc12 461 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 MC28_5414 2a01179cad573848fd54e0f73030bc12 461 Pfam PF00854 POT family 245 428 5.7E-37 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 MC28_5414 2a01179cad573848fd54e0f73030bc12 461 Pfam PF00854 POT family 92 212 1.5E-28 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 MC28_5414 2a01179cad573848fd54e0f73030bc12 461 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 16 226 1.5E-57 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 MC28_5414 2a01179cad573848fd54e0f73030bc12 461 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 243 460 1.1E-44 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 MC28_5414 2a01179cad573848fd54e0f73030bc12 461 SUPERFAMILY SSF103473 10 458 4.58E-46 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_3730 9f987ba53151ff3140abfb7930c59fdb 331 SUPERFAMILY SSF55874 150 315 1.69E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3730 9f987ba53151ff3140abfb7930c59fdb 331 PRINTS PR00344 Bacterial sensor protein C-terminal signature 245 259 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3730 9f987ba53151ff3140abfb7930c59fdb 331 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 297 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3730 9f987ba53151ff3140abfb7930c59fdb 331 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 273 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3730 9f987ba53151ff3140abfb7930c59fdb 331 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 316 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3730 9f987ba53151ff3140abfb7930c59fdb 331 Gene3D G3DSA:3.30.565.10 156 315 3.1E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3730 9f987ba53151ff3140abfb7930c59fdb 331 SMART SM00387 204 319 1.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3730 9f987ba53151ff3140abfb7930c59fdb 331 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 205 316 1.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3730 9f987ba53151ff3140abfb7930c59fdb 331 Gene3D G3DSA:1.10.287.130 102 155 3.1E-36 T 14-10-2018 MC28_0728 32f848581584c1486fbda92c4753b89d 176 Gene3D G3DSA:3.40.80.10 6 174 2.6E-45 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_0728 32f848581584c1486fbda92c4753b89d 176 SMART SM00644 15 151 2.6E-16 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_0728 32f848581584c1486fbda92c4753b89d 176 SUPERFAMILY SSF55846 15 168 4.45E-34 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_0728 32f848581584c1486fbda92c4753b89d 176 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 23 151 1.4E-19 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_0498 9d8e264a7484ad30217afbac737a32e9 72 Pfam PF12728 Helix-turn-helix domain 18 65 9.9E-10 T 14-10-2018 MC28_G410 9d8e264a7484ad30217afbac737a32e9 72 Pfam PF12728 Helix-turn-helix domain 18 65 9.9E-10 T 14-10-2018 MC28_1000 dc0aa0582e0be4963f0e9c117b375e08 149 Gene3D G3DSA:1.10.260.40 1 65 9.8E-23 T 14-10-2018 MC28_1000 dc0aa0582e0be4963f0e9c117b375e08 149 SUPERFAMILY SSF47413 1 66 5.63E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_1000 dc0aa0582e0be4963f0e9c117b375e08 149 SMART SM00530 6 61 1.6E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1000 dc0aa0582e0be4963f0e9c117b375e08 149 Pfam PF01381 Helix-turn-helix 7 61 2.1E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0658 018181202c1b52d0cab457522a5fa962 234 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 233 42.651 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 MC28_0658 018181202c1b52d0cab457522a5fa962 234 SUPERFAMILY SSF52402 16 197 5.33E-52 T 14-10-2018 MC28_0658 018181202c1b52d0cab457522a5fa962 234 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 24 232 3.8E-89 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 MC28_0658 018181202c1b52d0cab457522a5fa962 234 PIRSF PIRSF000857 3 234 5.0E-89 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 MC28_0658 018181202c1b52d0cab457522a5fa962 234 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 37 209 1.8E-50 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 MC28_0658 018181202c1b52d0cab457522a5fa962 234 Gene3D G3DSA:3.40.50.620 6 234 4.5E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_0658 018181202c1b52d0cab457522a5fa962 234 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 43 231 5.0E-72 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 Gene3D G3DSA:3.90.1170.30 340 427 5.4E-34 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 7 421 2.7E-186 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 Gene3D G3DSA:1.20.970.10 3 71 1.9E-31 T 14-10-2018 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 Gene3D G3DSA:3.40.1030.10 73 339 1.8E-118 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 114 129 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 SUPERFAMILY SSF52418 73 333 6.93E-93 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 SMART SM00941 349 422 2.3E-30 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 70 1.6E-24 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 SUPERFAMILY SSF47648 5 73 7.59E-25 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 SUPERFAMILY SSF54680 335 435 1.44E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 Pfam PF00591 Glycosyl transferase family, a/b domain 82 309 2.9E-48 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 PIRSF PIRSF000478 4 436 1.0E-170 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1067 ade66bc9e434fa446d52ed7c2eac9f36 437 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 349 422 7.4E-27 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_1412 5811c7e146925c6047e65aba0aa7774f 162 SUPERFAMILY SSF53597 1 161 2.62E-59 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 MC28_1412 5811c7e146925c6047e65aba0aa7774f 162 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.4E-12 T 14-10-2018 MC28_1412 5811c7e146925c6047e65aba0aa7774f 162 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.4E-12 T 14-10-2018 MC28_1412 5811c7e146925c6047e65aba0aa7774f 162 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.4E-12 T 14-10-2018 MC28_1412 5811c7e146925c6047e65aba0aa7774f 162 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.4E-12 T 14-10-2018 MC28_1412 5811c7e146925c6047e65aba0aa7774f 162 PIRSF PIRSF000194 1 162 2.5E-61 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 MC28_1412 5811c7e146925c6047e65aba0aa7774f 162 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 MC28_1412 5811c7e146925c6047e65aba0aa7774f 162 Pfam PF00186 Dihydrofolate reductase 3 160 1.4E-61 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 MC28_1412 5811c7e146925c6047e65aba0aa7774f 162 Gene3D G3DSA:3.40.430.10 1 162 3.0E-61 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 MC28_0889 0f8ee2e7558b84e8429de5365af06b14 138 Pfam PF00460 Flagella basal body rod protein 23 38 5.7E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MC28_0889 0f8ee2e7558b84e8429de5365af06b14 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site MC28_0889 0f8ee2e7558b84e8429de5365af06b14 138 PIRSF PIRSF002889 11 137 5.5E-19 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 MC28_0889 0f8ee2e7558b84e8429de5365af06b14 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 12 130 1.8E-20 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 Pfam PF13193 AMP-binding enzyme C-terminal domain 629 702 1.6E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 Gene3D G3DSA:3.40.50.720 811 1185 8.8E-74 T 14-10-2018 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 Gene3D G3DSA:3.30.300.30 615 717 6.8E-27 T 14-10-2018 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 ProSitePatterns PS00012 Phosphopantetheine attachment site. 755 770 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 SUPERFAMILY SSF47336 727 793 1.73E-12 T 14-10-2018 IPR036736 ACP-like superfamily MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 Gene3D G3DSA:3.40.50.12780 216 613 8.0E-123 T 14-10-2018 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 Pfam PF00550 Phosphopantetheine attachment site 733 793 3.2E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 244 645 8.0E-124 T 14-10-2018 IPR010071 Amino acid adenylation domain MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 SUPERFAMILY SSF51735 831 1104 4.96E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 SUPERFAMILY SSF56801 190 744 9.16E-145 T 14-10-2018 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 ProSitePatterns PS00455 Putative AMP-binding domain signature. 358 369 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 PIRSF PIRSF001617 56 336 5.5E-22 T 14-10-2018 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 PIRSF PIRSF001617 326 592 1.7E-21 T 14-10-2018 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 PIRSF PIRSF001617 587 674 9.3E-17 T 14-10-2018 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 PIRSF PIRSF001617 663 1133 3.3E-53 T 14-10-2018 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 Pfam PF07993 Male sterility protein 834 1070 4.9E-51 T 14-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 Pfam PF00501 AMP-binding enzyme 225 621 5.2E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_5104 826f3dde6be6e1ea44d500d53e1fca43 1193 Gene3D G3DSA:3.40.50.1820 721 810 2.6E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 SUPERFAMILY SSF51735 1 182 1.65E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 189 483 8.8E-104 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 PIRSF PIRSF000110 1 487 3.0E-189 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 3.5E-44 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 3.5E-44 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 3.5E-44 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 3.5E-44 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 3.5E-44 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 4 186 2.6E-63 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 Gene3D G3DSA:3.40.50.720 1 174 8.4E-61 T 14-10-2018 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 Gene3D G3DSA:3.30.360.10 175 486 4.8E-113 T 14-10-2018 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 1 485 80.096 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 SUPERFAMILY SSF55347 176 487 2.58E-103 T 14-10-2018 MC28_2515 388a2afa1dd2541b11b17f8f881eaa4b 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 2 484 3.3E-177 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 393 406 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Pfam PF00989 PAS fold 119 219 4.3E-14 T 14-10-2018 IPR013767 PAS fold GO:0006355 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Pfam PF00989 PAS fold 239 340 2.0E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 SUPERFAMILY SSF46689 583 682 5.38E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 SUPERFAMILY SSF51735 1 96 3.94E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Pfam PF02954 Bacterial regulatory protein, Fis family 643 682 8.7E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Gene3D G3DSA:1.10.8.60 542 623 2.7E-22 T 14-10-2018 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 665 685 8.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 648 665 8.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 SMART SM00382 389 533 3.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 583 592 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 456 471 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Pfam PF00158 Sigma-54 interaction domain 369 537 7.1E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 SUPERFAMILY SSF52540 368 608 2.83E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Gene3D G3DSA:3.40.50.300 356 541 1.6E-61 T 14-10-2018 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Gene3D G3DSA:3.30.450.20 110 220 4.7E-22 T 14-10-2018 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Gene3D G3DSA:3.30.450.20 224 340 5.0E-17 T 14-10-2018 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 SUPERFAMILY SSF55785 121 215 8.2E-16 T 14-10-2018 IPR035965 PAS domain superfamily MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 SUPERFAMILY SSF55785 236 336 1.03E-14 T 14-10-2018 IPR035965 PAS domain superfamily MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 236 350 1.6E-16 T 14-10-2018 IPR000014 PAS domain MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 121 228 2.3E-14 T 14-10-2018 IPR000014 PAS domain MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Gene3D G3DSA:1.10.10.60 631 686 3.4E-13 T 14-10-2018 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 Gene3D G3DSA:3.40.50.720 1 67 4.3E-6 T 14-10-2018 MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 SMART SM00091 237 302 1.9E-6 T 14-10-2018 IPR000014 PAS domain MC28_3458 df303dc6fa9d0f7544b378d439b8eb31 690 SMART SM00091 118 184 3.1E-11 T 14-10-2018 IPR000014 PAS domain MC28_1435 135931f9e16e6c050883282b04a04c8f 297 Gene3D G3DSA:2.30.30.60 121 171 1.5E-17 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily MC28_1435 135931f9e16e6c050883282b04a04c8f 297 Pfam PF00924 Mechanosensitive ion channel 65 272 1.3E-33 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 MC28_1435 135931f9e16e6c050883282b04a04c8f 297 SUPERFAMILY SSF82689 171 278 3.53E-9 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 MC28_1435 135931f9e16e6c050883282b04a04c8f 297 SUPERFAMILY SSF82861 22 104 1.83E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 MC28_1435 135931f9e16e6c050883282b04a04c8f 297 SUPERFAMILY SSF50182 106 169 7.85E-10 T 14-10-2018 IPR010920 LSM domain superfamily MC28_1435 135931f9e16e6c050883282b04a04c8f 297 Gene3D G3DSA:3.30.70.100 173 271 1.7E-8 T 14-10-2018 MC28_3507 db1beabd68667c02443858742e7ca966 110 SUPERFAMILY SSF103481 5 99 1.03E-15 T 14-10-2018 MC28_3507 db1beabd68667c02443858742e7ca966 110 Gene3D G3DSA:1.10.3730.20 1 105 6.3E-22 T 14-10-2018 MC28_3507 db1beabd68667c02443858742e7ca966 110 Pfam PF00893 Small Multidrug Resistance protein 1 90 1.2E-20 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 MC28_1557 a8fc2535822206ece85082db393815d4 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 10 368 7.8E-128 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 MC28_1557 a8fc2535822206ece85082db393815d4 372 Gene3D G3DSA:1.10.230.10 225 324 5.7E-113 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain MC28_1557 a8fc2535822206ece85082db393815d4 372 SUPERFAMILY SSF48256 6 367 1.57E-122 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 MC28_1557 a8fc2535822206ece85082db393815d4 372 ProSitePatterns PS00480 Citrate synthase signature. 259 272 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 MC28_1557 a8fc2535822206ece85082db393815d4 372 PIRSF PIRSF001369 1 371 2.5E-140 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type MC28_1557 a8fc2535822206ece85082db393815d4 372 PRINTS PR00143 Citrate synthase signature 330 344 3.2E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_1557 a8fc2535822206ece85082db393815d4 372 PRINTS PR00143 Citrate synthase signature 177 192 3.2E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_1557 a8fc2535822206ece85082db393815d4 372 PRINTS PR00143 Citrate synthase signature 252 272 3.2E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_1557 a8fc2535822206ece85082db393815d4 372 PRINTS PR00143 Citrate synthase signature 128 141 3.2E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_1557 a8fc2535822206ece85082db393815d4 372 PRINTS PR00143 Citrate synthase signature 199 227 3.2E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_1557 a8fc2535822206ece85082db393815d4 372 PRINTS PR00143 Citrate synthase signature 310 326 3.2E-34 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_1557 a8fc2535822206ece85082db393815d4 372 Gene3D G3DSA:1.10.580.10 33 357 5.7E-113 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 MC28_1557 a8fc2535822206ece85082db393815d4 372 Pfam PF00285 Citrate synthase, C-terminal domain 10 360 1.1E-114 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_E056 eeeff88b1fe1fe1a6dd94ac4f924ef5b 385 Gene3D G3DSA:1.10.510.10 211 333 2.1E-6 T 14-10-2018 MC28_E056 eeeff88b1fe1fe1a6dd94ac4f924ef5b 385 SUPERFAMILY SSF56112 219 346 1.32E-12 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_E056 eeeff88b1fe1fe1a6dd94ac4f924ef5b 385 SUPERFAMILY SSF56112 25 149 9.27E-11 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_1648 4acfb8b77c68829c0f9a2a55d090d9c4 294 SUPERFAMILY SSF55729 14 276 2.27E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1648 4acfb8b77c68829c0f9a2a55d090d9c4 294 Gene3D G3DSA:3.40.630.30 4 169 7.9E-20 T 14-10-2018 MC28_1648 4acfb8b77c68829c0f9a2a55d090d9c4 294 Pfam PF13527 Acetyltransferase (GNAT) domain 16 132 1.1E-17 T 14-10-2018 MC28_3237 c9f99f2192615c2de5c74419e0d82f95 437 Gene3D G3DSA:3.40.50.1010 1 144 1.3E-18 T 14-10-2018 MC28_3237 c9f99f2192615c2de5c74419e0d82f95 437 Pfam PF13638 PIN domain 1 142 2.1E-31 T 14-10-2018 IPR002716 PIN domain MC28_3237 c9f99f2192615c2de5c74419e0d82f95 437 SMART SM00670 1 130 1.1E-14 T 14-10-2018 IPR002716 PIN domain MC28_3237 c9f99f2192615c2de5c74419e0d82f95 437 Gene3D G3DSA:3.40.50.300 226 436 4.3E-69 T 14-10-2018 MC28_3237 c9f99f2192615c2de5c74419e0d82f95 437 Pfam PF02562 PhoH-like protein 228 432 5.2E-53 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 MC28_3237 c9f99f2192615c2de5c74419e0d82f95 437 SUPERFAMILY SSF52540 21 415 3.66E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 SUPERFAMILY SSF52283 1 360 1.28E-67 T 14-10-2018 MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 SMART SM01003 4 136 7.7E-78 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 Gene3D G3DSA:3.40.50.720 129 305 6.6E-141 T 14-10-2018 MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 Gene3D G3DSA:3.40.50.720 3 353 6.6E-141 T 14-10-2018 MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 SMART SM01002 148 297 4.2E-90 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.0E-180 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 3.3E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 SUPERFAMILY SSF51735 136 303 2.05E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 3.5E-47 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal MC28_5317 9ecbdbbf99f89291a66b078517c10928 377 PIRSF PIRSF000183 1 371 2.2E-191 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 MC28_5060 412d226f80e22b3919f7badfda5b5689 187 SUPERFAMILY SSF52833 1 187 9.78E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_5060 412d226f80e22b3919f7badfda5b5689 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.7E-105 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 MC28_5060 412d226f80e22b3919f7badfda5b5689 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 7.1E-5 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 MC28_5060 412d226f80e22b3919f7badfda5b5689 187 PIRSF PIRSF000239 1 187 1.5E-49 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 MC28_5060 412d226f80e22b3919f7badfda5b5689 187 Gene3D G3DSA:3.40.30.10 1 186 2.0E-59 T 14-10-2018 MC28_5060 412d226f80e22b3919f7badfda5b5689 187 Pfam PF00578 AhpC/TSA family 4 133 3.6E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 MC28_1500 8eea0c9282f94fad06780c97d8384f58 320 SUPERFAMILY SSF158499 208 265 3.14E-12 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_1500 8eea0c9282f94fad06780c97d8384f58 320 Gene3D G3DSA:1.10.10.630 200 270 1.2E-10 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_1500 8eea0c9282f94fad06780c97d8384f58 320 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 211 269 2.3E-15 T 14-10-2018 IPR006343 DnaD domain MC28_1500 8eea0c9282f94fad06780c97d8384f58 320 Pfam PF07261 Replication initiation and membrane attachment 212 271 1.5E-9 T 14-10-2018 IPR006343 DnaD domain MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 393 529 2.9E-11 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 Gene3D G3DSA:3.30.413.10 127 307 4.9E-137 T 14-10-2018 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 PRINTS PR00397 Sirohaem Fe-binding site signature 434 452 2.7E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 PRINTS PR00397 Sirohaem Fe-binding site signature 390 408 2.7E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 Gene3D G3DSA:3.30.413.10 389 527 1.4E-33 T 14-10-2018 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 SUPERFAMILY SSF56014 388 526 3.01E-32 T 14-10-2018 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 Gene3D G3DSA:3.90.480.20 13 378 4.9E-137 T 14-10-2018 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 135 290 4.1E-33 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 SUPERFAMILY SSF55124 16 134 1.8E-29 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 434 450 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 62 125 5.5E-19 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 313 375 5.8E-16 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 SUPERFAMILY SSF55124 270 401 6.21E-22 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_0661 af4ba176bad4ac8bd300854fe3b6bffd 540 SUPERFAMILY SSF56014 135 293 3.14E-40 T 14-10-2018 MC28_1113 b9fd9f185595760192b91eabdccac407 714 Pfam PF13342 C-terminal repeat of topoisomerase 656 713 6.4E-17 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat MC28_1113 b9fd9f185595760192b91eabdccac407 714 SMART SM00437 273 551 9.3E-86 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 MC28_1113 b9fd9f185595760192b91eabdccac407 714 SMART SM00493 1 130 1.7E-15 T 14-10-2018 IPR006171 TOPRIM domain MC28_1113 b9fd9f185595760192b91eabdccac407 714 Pfam PF01751 Toprim domain 3 138 2.4E-9 T 14-10-2018 IPR006171 TOPRIM domain MC28_1113 b9fd9f185595760192b91eabdccac407 714 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 703 1.0E-189 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 MC28_1113 b9fd9f185595760192b91eabdccac407 714 Gene3D G3DSA:1.10.460.10 164 596 3.4E-157 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MC28_1113 b9fd9f185595760192b91eabdccac407 714 Pfam PF01131 DNA topoisomerase 158 586 4.3E-126 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_1113 b9fd9f185595760192b91eabdccac407 714 SMART SM00436 130 225 9.0E-34 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 MC28_1113 b9fd9f185595760192b91eabdccac407 714 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 195 213 1.9E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_1113 b9fd9f185595760192b91eabdccac407 714 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 1.9E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_1113 b9fd9f185595760192b91eabdccac407 714 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 514 528 1.9E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_1113 b9fd9f185595760192b91eabdccac407 714 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 104 117 1.9E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_1113 b9fd9f185595760192b91eabdccac407 714 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 1.9E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_1113 b9fd9f185595760192b91eabdccac407 714 Gene3D G3DSA:3.40.50.140 1 157 7.9E-50 T 14-10-2018 MC28_1113 b9fd9f185595760192b91eabdccac407 714 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 310 324 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 MC28_1113 b9fd9f185595760192b91eabdccac407 714 Gene3D G3DSA:1.10.290.10 282 411 3.4E-157 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MC28_1113 b9fd9f185595760192b91eabdccac407 714 SUPERFAMILY SSF56712 1 600 2.09E-176 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain MC28_1113 b9fd9f185595760192b91eabdccac407 714 Gene3D G3DSA:2.70.20.10 219 481 3.4E-157 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MC28_1681 eed2c8d1a2bbd2b0b4a1dc73b7044680 236 Gene3D G3DSA:3.40.50.150 49 224 2.9E-40 T 14-10-2018 MC28_1681 eed2c8d1a2bbd2b0b4a1dc73b7044680 236 Pfam PF13649 Methyltransferase domain 63 156 9.5E-20 T 14-10-2018 MC28_1681 eed2c8d1a2bbd2b0b4a1dc73b7044680 236 SUPERFAMILY SSF53335 25 219 1.82E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3470 893d80c7f68c2cb30a297f7ca629caca 296 Pfam PF00348 Polyprenyl synthetase 32 272 1.6E-60 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 MC28_3470 893d80c7f68c2cb30a297f7ca629caca 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site MC28_3470 893d80c7f68c2cb30a297f7ca629caca 296 Gene3D G3DSA:1.10.600.10 2 296 1.6E-106 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily MC28_3470 893d80c7f68c2cb30a297f7ca629caca 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site MC28_3470 893d80c7f68c2cb30a297f7ca629caca 296 SUPERFAMILY SSF48576 8 275 2.16E-86 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily MC28_1309 7422ce7a9f88cb72d4289452721ea773 1476 SUPERFAMILY SSF52540 930 1169 2.47E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1309 7422ce7a9f88cb72d4289452721ea773 1476 Pfam PF12538 DNA transporter 1 88 9.1E-22 T 14-10-2018 IPR022206 Firmicutes EssC, N-terminal MC28_1309 7422ce7a9f88cb72d4289452721ea773 1476 SUPERFAMILY SSF52540 610 861 8.26E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1309 7422ce7a9f88cb72d4289452721ea773 1476 Gene3D G3DSA:3.40.50.300 346 525 3.2E-5 T 14-10-2018 MC28_1309 7422ce7a9f88cb72d4289452721ea773 1476 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 173 1468 0.0 T 14-10-2018 IPR023839 Firmicutes EssC, C-terminal MC28_1309 7422ce7a9f88cb72d4289452721ea773 1476 Gene3D G3DSA:3.40.50.300 588 879 1.1E-82 T 14-10-2018 MC28_1309 7422ce7a9f88cb72d4289452721ea773 1476 Pfam PF01580 FtsK/SpoIIIE family 944 1163 8.9E-28 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MC28_1309 7422ce7a9f88cb72d4289452721ea773 1476 Pfam PF01580 FtsK/SpoIIIE family 613 794 1.9E-27 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MC28_1309 7422ce7a9f88cb72d4289452721ea773 1476 Gene3D G3DSA:3.40.50.300 932 1230 2.9E-69 T 14-10-2018 MC28_2602 aacf14d7cf59612d5c80cd192825119a 250 SUPERFAMILY SSF56281 24 236 8.12E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_2602 aacf14d7cf59612d5c80cd192825119a 250 SMART SM00849 34 235 1.5E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2602 aacf14d7cf59612d5c80cd192825119a 250 Pfam PF00753 Metallo-beta-lactamase superfamily 33 235 3.2E-32 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2602 aacf14d7cf59612d5c80cd192825119a 250 Gene3D G3DSA:3.60.15.10 1 241 3.4E-98 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_4799 a9cf37c71e77079713113c9a8439bf03 158 Gene3D G3DSA:3.30.1330.50 1 158 1.2E-69 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 MC28_4799 a9cf37c71e77079713113c9a8439bf03 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 37.286 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 MC28_4799 a9cf37c71e77079713113c9a8439bf03 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.0E-73 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 MC28_4799 a9cf37c71e77079713113c9a8439bf03 158 Pfam PF02542 YgbB family 2 156 2.8E-67 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 MC28_4799 a9cf37c71e77079713113c9a8439bf03 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 MC28_4799 a9cf37c71e77079713113c9a8439bf03 158 SUPERFAMILY SSF69765 1 157 1.83E-67 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 Gene3D G3DSA:3.40.220.10 2 151 7.3E-34 T 14-10-2018 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 SUPERFAMILY SSF53187 175 489 5.96E-114 T 14-10-2018 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 179 484 3.7E-117 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 15 143 4.2E-28 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 493 35.149 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 PRINTS PR00481 Cytosol aminopeptidase signature 314 335 1.5E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 PRINTS PR00481 Cytosol aminopeptidase signature 336 356 1.5E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 PRINTS PR00481 Cytosol aminopeptidase signature 277 298 1.5E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 PRINTS PR00481 Cytosol aminopeptidase signature 364 379 1.5E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 PRINTS PR00481 Cytosol aminopeptidase signature 255 272 1.5E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 Gene3D G3DSA:3.40.630.10 165 490 3.3E-126 T 14-10-2018 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 SUPERFAMILY SSF52949 11 175 1.41E-32 T 14-10-2018 MC28_4190 2d602de6a9d06ea48b3592b34b0dbb89 494 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 340 347 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 MC28_4292 ff65ad11f4a5694c09628b9d8a8e7eea 79 SMART SM00530 12 67 2.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_4292 ff65ad11f4a5694c09628b9d8a8e7eea 79 Pfam PF01381 Helix-turn-helix 13 67 1.8E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_4292 ff65ad11f4a5694c09628b9d8a8e7eea 79 SUPERFAMILY SSF47413 6 75 1.45E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_4292 ff65ad11f4a5694c09628b9d8a8e7eea 79 Gene3D G3DSA:1.10.260.40 8 72 3.6E-24 T 14-10-2018 MC28_0638 1fee105ad5c41b351ed26c39380fdfe7 357 SMART SM01329 7 343 4.5E-175 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 MC28_0638 1fee105ad5c41b351ed26c39380fdfe7 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 347 45.364 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 MC28_0638 1fee105ad5c41b351ed26c39380fdfe7 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 8 343 3.4E-124 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 MC28_0638 1fee105ad5c41b351ed26c39380fdfe7 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 346 3.4E-139 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 MC28_0638 1fee105ad5c41b351ed26c39380fdfe7 357 SUPERFAMILY SSF53659 5 347 1.35E-115 T 14-10-2018 MC28_0638 1fee105ad5c41b351ed26c39380fdfe7 357 Gene3D G3DSA:3.40.718.10 4 355 3.9E-135 T 14-10-2018 MC28_0638 1fee105ad5c41b351ed26c39380fdfe7 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 MC28_1581 88aaf8ff03dbd38ce7eec4c3c70feee1 249 Gene3D G3DSA:3.90.470.20 33 236 3.4E-36 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 MC28_1581 88aaf8ff03dbd38ce7eec4c3c70feee1 249 SUPERFAMILY SSF56214 121 233 5.49E-21 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 MC28_1581 88aaf8ff03dbd38ce7eec4c3c70feee1 249 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 121 206 1.9E-13 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 MC28_1581 88aaf8ff03dbd38ce7eec4c3c70feee1 249 Gene3D G3DSA:3.90.470.20 122 229 3.4E-36 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 MC28_1581 88aaf8ff03dbd38ce7eec4c3c70feee1 249 SUPERFAMILY SSF56214 18 113 1.05E-15 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 MC28_4678 a4fceaa282465483bf64c789560bc867 356 Gene3D G3DSA:3.90.1230.10 193 298 3.7E-148 T 14-10-2018 MC28_4678 a4fceaa282465483bf64c789560bc867 356 SUPERFAMILY SSF56512 3 355 3.53E-167 T 14-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 MC28_4678 a4fceaa282465483bf64c789560bc867 356 PIRSF PIRSF037219 1 356 1.1E-190 T 14-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 MC28_4678 a4fceaa282465483bf64c789560bc867 356 Gene3D G3DSA:3.90.440.10 82 192 3.7E-148 T 14-10-2018 MC28_4678 a4fceaa282465483bf64c789560bc867 356 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 65 72 - T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 MC28_4678 a4fceaa282465483bf64c789560bc867 356 Pfam PF02898 Nitric oxide synthase, oxygenase domain 4 355 6.4E-165 T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 MC28_4678 a4fceaa282465483bf64c789560bc867 356 Gene3D G3DSA:3.90.340.10 6 353 3.7E-148 T 14-10-2018 MC28_3987 633eee9085fa3d65f1e5318eaed4bba7 538 Pfam PF01943 Polysaccharide biosynthesis protein 2 308 8.6E-43 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 MC28_3987 633eee9085fa3d65f1e5318eaed4bba7 538 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 360 507 1.0E-29 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain MC28_3987 633eee9085fa3d65f1e5318eaed4bba7 538 PIRSF PIRSF038958 1 525 5.7E-117 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type MC28_4683 6355fa2fa4360c0a01b90ef2818c6d02 338 Gene3D G3DSA:3.40.50.720 3 273 7.8E-146 T 14-10-2018 MC28_4683 6355fa2fa4360c0a01b90ef2818c6d02 338 Gene3D G3DSA:3.90.25.10 193 328 7.8E-146 T 14-10-2018 MC28_4683 6355fa2fa4360c0a01b90ef2818c6d02 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 321 9.9E-61 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_4683 6355fa2fa4360c0a01b90ef2818c6d02 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.9E-144 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 MC28_4683 6355fa2fa4360c0a01b90ef2818c6d02 338 SUPERFAMILY SSF51735 1 335 4.62E-96 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4683 6355fa2fa4360c0a01b90ef2818c6d02 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 2.9E-6 T 14-10-2018 MC28_4683 6355fa2fa4360c0a01b90ef2818c6d02 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.9E-6 T 14-10-2018 MC28_4683 6355fa2fa4360c0a01b90ef2818c6d02 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 2.9E-6 T 14-10-2018 MC28_0251 f46bc77e8ced4a44b55b41f6cc9e270a 46 ProDom PD049467 YFLJ 1 43 4.0E-17 T 14-10-2018 IPR022580 Protein of unknown function DUF2639 MC28_0251 f46bc77e8ced4a44b55b41f6cc9e270a 46 Pfam PF11121 Protein of unknown function (DUF2639) 2 39 7.7E-21 T 14-10-2018 IPR022580 Protein of unknown function DUF2639 MC28_1254 7e9c6121bc1edcf34a92c2e6682a1afd 203 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 MC28_1254 7e9c6121bc1edcf34a92c2e6682a1afd 203 SMART SM00855 4 158 5.9E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_1254 7e9c6121bc1edcf34a92c2e6682a1afd 203 PIRSF PIRSF000709 1 172 3.6E-23 T 14-10-2018 MC28_1254 7e9c6121bc1edcf34a92c2e6682a1afd 203 PRINTS PR00991 6-phosphofructo-2-kinase family signature 86 102 3.7E-5 T 14-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 MC28_1254 7e9c6121bc1edcf34a92c2e6682a1afd 203 PRINTS PR00991 6-phosphofructo-2-kinase family signature 5 27 3.7E-5 T 14-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 MC28_1254 7e9c6121bc1edcf34a92c2e6682a1afd 203 SUPERFAMILY SSF53254 1 202 1.83E-59 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_1254 7e9c6121bc1edcf34a92c2e6682a1afd 203 Gene3D G3DSA:3.40.50.1240 2 203 3.1E-66 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_1254 7e9c6121bc1edcf34a92c2e6682a1afd 203 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 198 3.9E-58 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_5082 fc17d7473caaa8def40ed06f7cc78daf 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 4.1E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_5082 fc17d7473caaa8def40ed06f7cc78daf 233 SUPERFAMILY SSF161098 13 215 9.16E-46 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5082 fc17d7473caaa8def40ed06f7cc78daf 233 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 108 8.3E-26 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 MC28_5082 fc17d7473caaa8def40ed06f7cc78daf 233 Gene3D G3DSA:1.10.3720.10 3 218 1.3E-55 T 14-10-2018 IPR035906 MetI-like superfamily MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 Gene3D G3DSA:3.30.420.40 1 245 7.5E-79 T 14-10-2018 MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 SUPERFAMILY SSF53067 247 495 3.06E-68 T 14-10-2018 MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 PIRSF PIRSF000538 1 500 1.3E-138 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 1 504 5.4E-250 T 14-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 129 141 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 SUPERFAMILY SSF53067 2 246 4.29E-68 T 14-10-2018 MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 244 5.1E-71 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 448 3.5E-35 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 MC28_2510 c96693f3125ae5bab5364f3d024a7f50 507 Gene3D G3DSA:3.30.420.40 246 506 2.4E-89 T 14-10-2018 MC28_F090 3a02491763f0ef0854b59a5eb47315bb 159 Pfam PF00583 Acetyltransferase (GNAT) family 47 134 1.7E-13 T 14-10-2018 IPR000182 GNAT domain MC28_F090 3a02491763f0ef0854b59a5eb47315bb 159 Gene3D G3DSA:3.40.630.30 1 149 2.9E-27 T 14-10-2018 MC28_F090 3a02491763f0ef0854b59a5eb47315bb 159 SUPERFAMILY SSF55729 1 138 6.28E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2822 c32596b9d24834e4fe4c4a770f87ca6d 334 Pfam PF08239 Bacterial SH3 domain 221 262 8.9E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2822 c32596b9d24834e4fe4c4a770f87ca6d 334 SMART SM00287 212 269 1.5E-4 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2822 c32596b9d24834e4fe4c4a770f87ca6d 334 SMART SM00287 273 330 0.17 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2822 c32596b9d24834e4fe4c4a770f87ca6d 334 Gene3D G3DSA:3.20.20.80 1 195 1.8E-59 T 14-10-2018 MC28_2822 c32596b9d24834e4fe4c4a770f87ca6d 334 SMART SM00641 1 100 1.9E-15 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup MC28_2822 c32596b9d24834e4fe4c4a770f87ca6d 334 Pfam PF01183 Glycosyl hydrolases family 25 1 177 2.1E-54 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 MC28_2822 c32596b9d24834e4fe4c4a770f87ca6d 334 Gene3D G3DSA:2.30.30.40 205 269 4.0E-9 T 14-10-2018 MC28_2822 c32596b9d24834e4fe4c4a770f87ca6d 334 Gene3D G3DSA:2.30.30.40 270 331 9.0E-7 T 14-10-2018 MC28_2822 c32596b9d24834e4fe4c4a770f87ca6d 334 SUPERFAMILY SSF51445 1 184 2.95E-54 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_2823 ab964c3b3e72feb3b2678feb46e53241 588 Pfam PF00005 ABC transporter 360 509 3.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2823 ab964c3b3e72feb3b2678feb46e53241 588 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2823 ab964c3b3e72feb3b2678feb46e53241 588 SUPERFAMILY SSF52540 337 579 8.25E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2823 ab964c3b3e72feb3b2678feb46e53241 588 Pfam PF00664 ABC transporter transmembrane region 25 298 1.8E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 MC28_2823 ab964c3b3e72feb3b2678feb46e53241 588 SUPERFAMILY SSF90123 6 329 2.35E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_2823 ab964c3b3e72feb3b2678feb46e53241 588 Gene3D G3DSA:3.40.50.300 340 587 6.4E-91 T 14-10-2018 MC28_2823 ab964c3b3e72feb3b2678feb46e53241 588 SMART SM00382 369 561 1.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2823 ab964c3b3e72feb3b2678feb46e53241 588 Gene3D G3DSA:1.20.1560.10 1 327 5.2E-88 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 TIGRFAM TIGR01229 rocF_arginase: arginase 17 308 1.8E-81 T 14-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 PIRSF PIRSF036979 9 312 1.9E-32 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 Pfam PF00491 Arginase family 15 304 1.5E-70 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 SUPERFAMILY SSF52768 15 308 1.33E-82 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 ProSitePatterns PS01053 Arginase family signature. 235 256 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 Gene3D G3DSA:3.40.800.10 3 313 3.0E-97 T 14-10-2018 MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 PRINTS PR00116 Arginase signature 232 261 2.5E-37 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 PRINTS PR00116 Arginase signature 106 121 2.5E-37 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 PRINTS PR00116 Arginase signature 183 201 2.5E-37 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_G194 bc160c2bd9de0196cceaa72b1a04dbd7 313 PRINTS PR00116 Arginase signature 129 156 2.5E-37 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_1594 db72b2d7516f1fe834d06822bdced1eb 290 SUPERFAMILY SSF53474 7 288 3.43E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1594 db72b2d7516f1fe834d06822bdced1eb 290 Gene3D G3DSA:3.40.50.1820 1 289 6.5E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1594 db72b2d7516f1fe834d06822bdced1eb 290 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 12 20 7.5E-6 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MC28_1594 db72b2d7516f1fe834d06822bdced1eb 290 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 88 102 7.5E-6 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MC28_1594 db72b2d7516f1fe834d06822bdced1eb 290 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 51 7.5E-6 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MC28_1594 db72b2d7516f1fe834d06822bdced1eb 290 Pfam PF00561 alpha/beta hydrolase fold 10 117 2.1E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 SUPERFAMILY SSF52743 150 572 2.23E-88 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 PRINTS PR00723 Subtilisin serine protease family (S8) signature 507 523 5.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 PRINTS PR00723 Subtilisin serine protease family (S8) signature 212 225 5.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 PRINTS PR00723 Subtilisin serine protease family (S8) signature 174 193 5.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 Pfam PF00082 Subtilase family 174 562 2.0E-63 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 Gene3D G3DSA:2.60.40.4070 739 788 5.1E-6 T 14-10-2018 MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 508 518 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 Pfam PF05922 Peptidase inhibitor I9 54 137 1.5E-10 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 Pfam PF02225 PA domain 363 446 3.3E-11 T 14-10-2018 IPR003137 PA domain MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 SUPERFAMILY SSF52025 360 427 4.84E-15 T 14-10-2018 MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 Gene3D G3DSA:3.50.30.30 337 465 2.1E-20 T 14-10-2018 MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 179 190 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 216 226 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site MC28_3647 26a0dfe59c577f4141a5fc789791a223 894 Gene3D G3DSA:3.30.70.80 46 132 2.3E-5 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 3.2E-69 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 3.2E-69 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.2E-69 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 3.2E-69 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 3.2E-69 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 3.2E-69 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 3.2E-69 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 3.2E-69 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.2E-69 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.7E-36 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 1.7E-36 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.7E-36 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.7E-36 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 1.7E-36 T 14-10-2018 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 SUPERFAMILY SSF55424 350 472 2.58E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 Gene3D G3DSA:3.50.50.60 163 285 6.3E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 SUPERFAMILY SSF51905 1 377 4.19E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 8.3E-38 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 PIRSF PIRSF000350 1 469 6.7E-86 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 2.5E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 Gene3D G3DSA:3.50.50.60 5 341 6.3E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 Gene3D G3DSA:3.30.390.30 353 473 4.5E-46 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_3454 b091c01bb5c5c806be81d8259d81fafa 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 9.1E-178 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 MC28_1659 20ffefb40cd613e53a3958fe5f9bfcf4 210 SUPERFAMILY SSF51182 30 173 7.64E-27 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_1659 20ffefb40cd613e53a3958fe5f9bfcf4 210 Pfam PF00190 Cupin 32 124 8.4E-10 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 MC28_1659 20ffefb40cd613e53a3958fe5f9bfcf4 210 SMART SM00835 21 158 1.5E-12 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 MC28_1659 20ffefb40cd613e53a3958fe5f9bfcf4 210 Gene3D G3DSA:2.60.120.10 2 173 1.1E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_1635 e8c63212a730148dd45664eca8f7e037 466 Gene3D G3DSA:1.10.3110.10 106 199 1.3E-113 T 14-10-2018 MC28_1635 e8c63212a730148dd45664eca8f7e037 466 Gene3D G3DSA:3.90.660.20 40 407 1.3E-113 T 14-10-2018 MC28_1635 e8c63212a730148dd45664eca8f7e037 466 SUPERFAMILY SSF54373 300 407 4.32E-21 T 14-10-2018 MC28_1635 e8c63212a730148dd45664eca8f7e037 466 Gene3D G3DSA:3.50.50.60 5 449 1.3E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1635 e8c63212a730148dd45664eca8f7e037 466 SUPERFAMILY SSF51905 2 458 1.78E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1635 e8c63212a730148dd45664eca8f7e037 466 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 1 461 2.7E-84 T 14-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 MC28_1635 e8c63212a730148dd45664eca8f7e037 466 Pfam PF01593 Flavin containing amine oxidoreductase 32 458 3.2E-43 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 MC28_2584 77caecd459b631aba666f02527b30423 253 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2584 77caecd459b631aba666f02527b30423 253 SUPERFAMILY SSF52540 5 223 1.2E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2584 77caecd459b631aba666f02527b30423 253 SMART SM00382 30 219 3.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2584 77caecd459b631aba666f02527b30423 253 Pfam PF00005 ABC transporter 21 162 2.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2584 77caecd459b631aba666f02527b30423 253 Gene3D G3DSA:3.40.50.300 1 236 7.0E-66 T 14-10-2018 MC28_3659 d4029416dc85df153866d63e761a8155 315 Gene3D G3DSA:3.40.50.1980 35 132 4.5E-16 T 14-10-2018 MC28_3659 d4029416dc85df153866d63e761a8155 315 Pfam PF01497 Periplasmic binding protein 67 289 5.4E-34 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_3659 d4029416dc85df153866d63e761a8155 315 Gene3D G3DSA:3.40.50.1980 141 312 7.8E-50 T 14-10-2018 MC28_3659 d4029416dc85df153866d63e761a8155 315 SUPERFAMILY SSF53807 42 309 8.63E-58 T 14-10-2018 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 PIRSF PIRSF006294 3 527 1.7E-246 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 SUPERFAMILY SSF68923 8 212 4.88E-81 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 Gene3D G3DSA:2.170.8.10 38 330 5.1E-227 T 14-10-2018 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 250 265 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 17 526 1.4E-249 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 Pfam PF01293 Phosphoenolpyruvate carboxykinase 20 481 3.8E-229 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 Gene3D G3DSA:3.40.449.10 28 213 5.1E-227 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 SUPERFAMILY SSF53795 213 524 9.61E-138 T 14-10-2018 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 528 56.339 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 MC28_4054 b18785fb9fbca2b8966f9dfb1bf16f71 528 Gene3D G3DSA:3.90.228.20 214 513 5.1E-227 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 MC28_0673 d0315b70440e4d8fce351f3102efb3ce 220 Pfam PF04012 PspA/IM30 family 5 208 3.4E-27 T 14-10-2018 IPR007157 PspA/IM30 MC28_4279 d2e1fc6a561d0a5fc06bbee45bb61a61 100 Pfam PF01910 Thiamine-binding protein 4 97 5.6E-35 T 14-10-2018 IPR002767 Thiamine-binding protein MC28_4279 d2e1fc6a561d0a5fc06bbee45bb61a61 100 SUPERFAMILY SSF89957 1 100 1.44E-32 T 14-10-2018 IPR029756 MTH1187/YkoF-like MC28_4279 d2e1fc6a561d0a5fc06bbee45bb61a61 100 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 100 7.9E-34 T 14-10-2018 IPR002767 Thiamine-binding protein MC28_4279 d2e1fc6a561d0a5fc06bbee45bb61a61 100 Gene3D G3DSA:3.30.70.930 1 100 9.2E-39 T 14-10-2018 IPR029756 MTH1187/YkoF-like MC28_3106 f3a054ab0c24401e1ffd955f99984315 238 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 229 9.0E-64 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3106 f3a054ab0c24401e1ffd955f99984315 238 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 228 9.1E-48 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3106 f3a054ab0c24401e1ffd955f99984315 238 SMART SM00934 4 229 9.1E-90 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3106 f3a054ab0c24401e1ffd955f99984315 238 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 234 39.726 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3106 f3a054ab0c24401e1ffd955f99984315 238 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3106 f3a054ab0c24401e1ffd955f99984315 238 SUPERFAMILY SSF51366 4 233 1.28E-72 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 MC28_3106 f3a054ab0c24401e1ffd955f99984315 238 Gene3D G3DSA:3.20.20.70 1 237 4.0E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_G238 b05f420ac93635457ba77b659c582b42 323 SUPERFAMILY SSF88659 220 300 1.18E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_G238 b05f420ac93635457ba77b659c582b42 323 Pfam PF04545 Sigma-70, region 4 249 299 3.6E-9 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_G238 b05f420ac93635457ba77b659c582b42 323 SUPERFAMILY SSF88946 30 141 1.83E-28 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_G238 b05f420ac93635457ba77b659c582b42 323 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 68 300 4.6E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_G238 b05f420ac93635457ba77b659c582b42 323 Gene3D G3DSA:1.20.120.1810 2 142 4.7E-27 T 14-10-2018 MC28_G238 b05f420ac93635457ba77b659c582b42 323 SUPERFAMILY SSF88659 148 213 2.05E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_G238 b05f420ac93635457ba77b659c582b42 323 Gene3D G3DSA:1.20.140.160 148 301 1.3E-16 T 14-10-2018 MC28_G238 b05f420ac93635457ba77b659c582b42 323 PRINTS PR00046 Major sigma-70 factor signature 98 111 8.6E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_G238 b05f420ac93635457ba77b659c582b42 323 PRINTS PR00046 Major sigma-70 factor signature 122 130 8.6E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_G238 b05f420ac93635457ba77b659c582b42 323 PRINTS PR00046 Major sigma-70 factor signature 271 286 8.6E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_G238 b05f420ac93635457ba77b659c582b42 323 PRINTS PR00046 Major sigma-70 factor signature 286 297 8.6E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_G238 b05f420ac93635457ba77b659c582b42 323 PRINTS PR00046 Major sigma-70 factor signature 250 262 8.6E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_G238 b05f420ac93635457ba77b659c582b42 323 Pfam PF04542 Sigma-70 region 2 75 141 6.0E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_E065 c3b67171f25a79ecfbe73ec92e2115c4 510 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 401 492 3.8E-7 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_E065 c3b67171f25a79ecfbe73ec92e2115c4 510 SMART SM00148 56 213 1.2E-8 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_E065 c3b67171f25a79ecfbe73ec92e2115c4 510 Gene3D G3DSA:2.80.10.50 367 510 9.2E-32 T 14-10-2018 MC28_E065 c3b67171f25a79ecfbe73ec92e2115c4 510 SMART SM00458 370 508 8.6E-8 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_E065 c3b67171f25a79ecfbe73ec92e2115c4 510 SUPERFAMILY SSF51695 46 363 1.62E-46 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_E065 c3b67171f25a79ecfbe73ec92e2115c4 510 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 93 211 1.9E-7 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_E065 c3b67171f25a79ecfbe73ec92e2115c4 510 Gene3D G3DSA:3.20.20.190 45 300 1.2E-65 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_E065 c3b67171f25a79ecfbe73ec92e2115c4 510 SUPERFAMILY SSF50370 369 505 6.18E-23 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_F218 b5d228d0ba88d70b217118cd29207dbb 271 Gene3D G3DSA:1.10.10.60 161 213 9.4E-10 T 14-10-2018 MC28_F218 b5d228d0ba88d70b217118cd29207dbb 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 259 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MC28_F218 b5d228d0ba88d70b217118cd29207dbb 271 SUPERFAMILY SSF51215 11 147 1.31E-7 T 14-10-2018 IPR037923 Transcription regulator HTH-like MC28_F218 b5d228d0ba88d70b217118cd29207dbb 271 SMART SM00342 180 263 1.3E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_F218 b5d228d0ba88d70b217118cd29207dbb 271 Gene3D G3DSA:1.10.10.60 214 268 1.6E-17 T 14-10-2018 MC28_F218 b5d228d0ba88d70b217118cd29207dbb 271 SUPERFAMILY SSF46689 216 268 1.58E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_F218 b5d228d0ba88d70b217118cd29207dbb 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 247 6.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_F218 b5d228d0ba88d70b217118cd29207dbb 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 263 6.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_F218 b5d228d0ba88d70b217118cd29207dbb 271 Pfam PF12833 Helix-turn-helix domain 189 264 9.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_2751 7e8ad1b782c14f01e5371e78e60c194e 150 Pfam PF13353 4Fe-4S single cluster domain 12 146 1.8E-36 T 14-10-2018 MC28_2751 7e8ad1b782c14f01e5371e78e60c194e 150 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 149 2.8E-49 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 MC28_2751 7e8ad1b782c14f01e5371e78e60c194e 150 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 MC28_2751 7e8ad1b782c14f01e5371e78e60c194e 150 Gene3D G3DSA:3.20.20.70 1 150 3.5E-36 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2751 7e8ad1b782c14f01e5371e78e60c194e 150 PIRSF PIRSF000368 1 150 3.0E-54 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 MC28_2751 7e8ad1b782c14f01e5371e78e60c194e 150 Pfam PF04055 Radical SAM superfamily 20 108 1.8E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_2751 7e8ad1b782c14f01e5371e78e60c194e 150 SUPERFAMILY SSF102114 22 101 7.19E-11 T 14-10-2018 MC28_G167 98d9cc1663390eb4fb1e03f54291119d 322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 313 1.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G167 98d9cc1663390eb4fb1e03f54291119d 322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 242 256 1.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G167 98d9cc1663390eb4fb1e03f54291119d 322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 294 1.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G167 98d9cc1663390eb4fb1e03f54291119d 322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 260 270 1.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G167 98d9cc1663390eb4fb1e03f54291119d 322 SUPERFAMILY SSF55874 151 314 8.25E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G167 98d9cc1663390eb4fb1e03f54291119d 322 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 206 314 3.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G167 98d9cc1663390eb4fb1e03f54291119d 322 Gene3D G3DSA:3.30.565.10 135 312 1.3E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G167 98d9cc1663390eb4fb1e03f54291119d 322 SMART SM00387 205 316 4.1E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5387 84e5592f70a203bd75e485444ef6d618 323 Gene3D G3DSA:3.40.50.2300 156 282 4.7E-81 T 14-10-2018 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.7E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 Pfam PF13377 Periplasmic binding protein-like domain 167 322 4.0E-35 T 14-10-2018 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 SMART SM00354 1 71 9.9E-36 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 SUPERFAMILY SSF47413 2 59 8.04E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 Gene3D G3DSA:1.10.260.40 3 59 1.5E-23 T 14-10-2018 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 Gene3D G3DSA:3.40.50.2300 62 302 4.7E-81 T 14-10-2018 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_5387 84e5592f70a203bd75e485444ef6d618 323 SUPERFAMILY SSF53822 60 323 1.52E-80 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_0755 a3c26e7faf0bcfc7cd9a585f1db5fbbc 151 Pfam PF10673 Protein of unknown function (DUF2487) 9 149 2.6E-53 T 14-10-2018 IPR019615 Protein of unknown function DUF2487 MC28_4296 f4444f6f3d83bc07125dd0643be3cb27 153 SUPERFAMILY SSF141523 27 152 6.41E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like MC28_4296 f4444f6f3d83bc07125dd0643be3cb27 153 Pfam PF03734 L,D-transpeptidase catalytic domain 31 152 2.6E-21 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 MC28_4296 f4444f6f3d83bc07125dd0643be3cb27 153 Gene3D G3DSA:2.40.440.10 14 153 4.6E-38 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 Gene3D G3DSA:2.40.10.10 170 288 8.3E-38 T 14-10-2018 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 SMART SM00228 289 377 9.8E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 Pfam PF13180 PDZ domain 289 386 8.3E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 PRINTS PR00834 HtrA/DegQ protease family signature 178 202 1.0E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 1.0E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 1.0E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 1.0E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 PRINTS PR00834 HtrA/DegQ protease family signature 335 347 1.0E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 1.0E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 SUPERFAMILY SSF50156 271 386 2.37E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 Pfam PF13365 Trypsin-like peptidase domain 104 251 1.0E-30 T 14-10-2018 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 Gene3D G3DSA:2.40.10.10 58 169 1.9E-27 T 14-10-2018 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 Gene3D G3DSA:2.30.42.10 289 390 5.6E-21 T 14-10-2018 MC28_4693 fcedc2f59c0d5542db2848478abd9f6c 391 SUPERFAMILY SSF50494 70 286 4.82E-56 T 14-10-2018 IPR009003 Peptidase S1, PA clan MC28_2771 f9b3b563b0bfa0b3e805f268e0bc7bac 147 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.9E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_2771 f9b3b563b0bfa0b3e805f268e0bc7bac 147 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.9E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_2771 f9b3b563b0bfa0b3e805f268e0bc7bac 147 Pfam PF00293 NUDIX domain 7 123 2.8E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_2771 f9b3b563b0bfa0b3e805f268e0bc7bac 147 Gene3D G3DSA:3.90.79.10 6 146 1.1E-40 T 14-10-2018 MC28_2771 f9b3b563b0bfa0b3e805f268e0bc7bac 147 SUPERFAMILY SSF55811 9 128 1.25E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_2771 f9b3b563b0bfa0b3e805f268e0bc7bac 147 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_3545 18c216d2b86a9c5369339022718a9edb 352 Gene3D G3DSA:3.40.50.2000 176 337 2.1E-40 T 14-10-2018 MC28_3545 18c216d2b86a9c5369339022718a9edb 352 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 141 1.9E-39 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3545 18c216d2b86a9c5369339022718a9edb 352 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 350 29.376 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3545 18c216d2b86a9c5369339022718a9edb 352 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 349 6.2E-85 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3545 18c216d2b86a9c5369339022718a9edb 352 SUPERFAMILY SSF53756 2 349 4.11E-96 T 14-10-2018 MC28_3545 18c216d2b86a9c5369339022718a9edb 352 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 187 344 1.5E-33 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 MC28_3545 18c216d2b86a9c5369339022718a9edb 352 Gene3D G3DSA:3.40.50.2000 1 175 7.0E-60 T 14-10-2018 MC28_E117 fe64bff222d74d269c66ae2d0f68be8b 73 Gene3D G3DSA:2.30.30.100 6 73 8.6E-23 T 14-10-2018 MC28_E117 fe64bff222d74d269c66ae2d0f68be8b 73 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 14 71 2.3E-22 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MC28_E117 fe64bff222d74d269c66ae2d0f68be8b 73 Pfam PF17209 Hfq protein 15 71 3.6E-20 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MC28_E117 fe64bff222d74d269c66ae2d0f68be8b 73 SUPERFAMILY SSF50182 15 72 3.23E-18 T 14-10-2018 IPR010920 LSM domain superfamily MC28_E117 fe64bff222d74d269c66ae2d0f68be8b 73 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 8 73 24.447 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MC28_3214 79be61e1703a7610736780411b70b647 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.7E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 MC28_3214 79be61e1703a7610736780411b70b647 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.7E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 MC28_3214 79be61e1703a7610736780411b70b647 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.7E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 MC28_3214 79be61e1703a7610736780411b70b647 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.7E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 MC28_3214 79be61e1703a7610736780411b70b647 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.7E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 MC28_3214 79be61e1703a7610736780411b70b647 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.308 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 MC28_3214 79be61e1703a7610736780411b70b647 163 Pfam PF01467 Cytidylyltransferase-like 9 134 2.9E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MC28_3214 79be61e1703a7610736780411b70b647 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 158 4.9E-62 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 MC28_3214 79be61e1703a7610736780411b70b647 163 SUPERFAMILY SSF52374 4 157 3.38E-44 T 14-10-2018 MC28_3214 79be61e1703a7610736780411b70b647 163 Gene3D G3DSA:3.40.50.620 1 161 1.5E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3214 79be61e1703a7610736780411b70b647 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 7.8E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MC28_3214 79be61e1703a7610736780411b70b647 163 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 4.0E-5 T 14-10-2018 MC28_4241 f9f695e54365395274968bba3c4428c1 100 Pfam PF08827 Domain of unknown function (DUF1805) 37 99 3.8E-23 T 14-10-2018 IPR014931 Protein of unknown function DUF1805 MC28_4241 f9f695e54365395274968bba3c4428c1 100 Gene3D G3DSA:3.30.1980.10 1 100 4.1E-24 T 14-10-2018 IPR036493 Hypothetical protein YunC superfamily MC28_4241 f9f695e54365395274968bba3c4428c1 100 SUPERFAMILY SSF102891 1 99 1.83E-34 T 14-10-2018 IPR036493 Hypothetical protein YunC superfamily MC28_G151 99fd5f4e5a7dd5895b89e2ccf5335400 164 Pfam PF13042 Protein of unknown function (DUF3902) 2 158 1.3E-48 T 14-10-2018 IPR025001 Protein of unknown function DUF3902 MC28_4789 4ff1aa48e00e7f035fd2bad2b031680e 339 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 11 329 6.0E-135 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 MC28_4789 4ff1aa48e00e7f035fd2bad2b031680e 339 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 MC28_4789 4ff1aa48e00e7f035fd2bad2b031680e 339 Pfam PF01207 Dihydrouridine synthase (Dus) 21 326 9.1E-111 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 MC28_4789 4ff1aa48e00e7f035fd2bad2b031680e 339 SUPERFAMILY SSF51395 18 329 6.96E-89 T 14-10-2018 MC28_4789 4ff1aa48e00e7f035fd2bad2b031680e 339 Gene3D G3DSA:1.10.1200.80 261 337 5.8E-19 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 MC28_4789 4ff1aa48e00e7f035fd2bad2b031680e 339 PIRSF PIRSF006621 8 337 9.4E-106 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 MC28_4789 4ff1aa48e00e7f035fd2bad2b031680e 339 Gene3D G3DSA:3.20.20.70 14 257 2.7E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2585 08735a5be5dbe7b70f049a5c895ff645 124 PIRSF PIRSF029876 14 122 1.1E-45 T 14-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 MC28_2585 08735a5be5dbe7b70f049a5c895ff645 124 SUPERFAMILY SSF158560 11 119 1.03E-35 T 14-10-2018 MC28_2585 08735a5be5dbe7b70f049a5c895ff645 124 Gene3D G3DSA:1.10.1900.10 9 120 1.8E-39 T 14-10-2018 MC28_2585 08735a5be5dbe7b70f049a5c895ff645 124 Pfam PF06304 Protein of unknown function (DUF1048) 18 117 3.5E-42 T 14-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 MC28_2964 e3ef1d1311dcdafe6ef30806c82ca5a6 794 Pfam PF01580 FtsK/SpoIIIE family 433 629 3.9E-65 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MC28_2964 e3ef1d1311dcdafe6ef30806c82ca5a6 794 Pfam PF09397 Ftsk gamma domain 727 786 2.8E-30 T 14-10-2018 IPR018541 FtsK gamma domain MC28_2964 e3ef1d1311dcdafe6ef30806c82ca5a6 794 SUPERFAMILY SSF46785 725 787 7.62E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2964 e3ef1d1311dcdafe6ef30806c82ca5a6 794 SUPERFAMILY SSF52540 406 701 1.59E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2964 e3ef1d1311dcdafe6ef30806c82ca5a6 794 Gene3D G3DSA:3.30.980.40 325 428 2.4E-38 T 14-10-2018 MC28_2964 e3ef1d1311dcdafe6ef30806c82ca5a6 794 SMART SM00843 724 789 2.5E-39 T 14-10-2018 IPR018541 FtsK gamma domain MC28_2964 e3ef1d1311dcdafe6ef30806c82ca5a6 794 Gene3D G3DSA:1.10.10.10 721 785 6.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2964 e3ef1d1311dcdafe6ef30806c82ca5a6 794 SMART SM00382 468 650 0.0021 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2964 e3ef1d1311dcdafe6ef30806c82ca5a6 794 Gene3D G3DSA:3.40.50.300 430 715 4.5E-111 T 14-10-2018 MC28_4431 438f416a0e61e801d44f38a2afe9bb28 211 SUPERFAMILY SSF54211 3 131 4.55E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_4431 438f416a0e61e801d44f38a2afe9bb28 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site MC28_4431 438f416a0e61e801d44f38a2afe9bb28 211 SUPERFAMILY SSF54980 137 200 1.01E-10 T 14-10-2018 IPR035647 EF-G domain III/V-like MC28_4431 438f416a0e61e801d44f38a2afe9bb28 211 Gene3D G3DSA:3.30.230.30 2 133 1.0E-51 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily MC28_4431 438f416a0e61e801d44f38a2afe9bb28 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 4 201 3.2E-77 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal MC28_4431 438f416a0e61e801d44f38a2afe9bb28 211 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 2.5E-18 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal MC28_4431 438f416a0e61e801d44f38a2afe9bb28 211 Pfam PF01205 Uncharacterized protein family UPF0029 19 122 1.8E-33 T 14-10-2018 IPR001498 Impact, N-terminal MC28_2273 c656a4c0e661e626c384f250643eb6a7 225 SUPERFAMILY SSF110395 1 224 3.53E-61 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 MC28_2273 c656a4c0e661e626c384f250643eb6a7 225 Pfam PF03932 CutC family 2 199 6.3E-55 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 MC28_2273 c656a4c0e661e626c384f250643eb6a7 225 Gene3D G3DSA:3.20.20.380 1 225 7.7E-86 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 MC28_2273 c656a4c0e661e626c384f250643eb6a7 225 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 1 203 25.688 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 MC28_3563 9267e21c3108cbd404105b4e65c477c1 301 Gene3D G3DSA:1.10.3720.10 73 300 4.7E-35 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3563 9267e21c3108cbd404105b4e65c477c1 301 SUPERFAMILY SSF161098 25 294 1.31E-34 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3563 9267e21c3108cbd404105b4e65c477c1 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 299 7.8E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_3563 9267e21c3108cbd404105b4e65c477c1 301 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 297 4.9E-80 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.7E-40 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 Gene3D G3DSA:3.40.50.2300 158 269 2.8E-41 T 14-10-2018 MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 283 614 2.8E-122 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 171 252 5.7E-30 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 148 2.9E-39 T 14-10-2018 IPR002178 PTS EIIA type-2 domain MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 171 260 2.3E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 Gene3D G3DSA:3.40.930.10 1 150 4.7E-49 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 SUPERFAMILY SSF55804 1 148 5.36E-44 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 MC28_2880 a8d199962e0f75b1f532a8e7916f2344 618 SUPERFAMILY SSF52794 169 269 3.84E-36 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 MC28_1567 ee0cc8056d383ed600837ee87f28b736 385 Gene3D G3DSA:3.60.21.10 1 271 1.5E-75 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_1567 ee0cc8056d383ed600837ee87f28b736 385 Pfam PF00149 Calcineurin-like phosphoesterase 1 180 4.5E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_1567 ee0cc8056d383ed600837ee87f28b736 385 SUPERFAMILY SSF56300 1 318 4.71E-53 T 14-10-2018 MC28_1567 ee0cc8056d383ed600837ee87f28b736 385 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 249 3.3E-46 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 MC28_1567 ee0cc8056d383ed600837ee87f28b736 385 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 272 357 3.3E-8 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain MC28_3870 caa61279401387f43453b9f709e1f4b1 312 Hamap MF_00487 Malate dehydrogenase [mdh]. 6 312 47.479 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 Gene3D G3DSA:3.40.50.720 1 149 3.8E-63 T 14-10-2018 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 5.8E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 5.8E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 5.8E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 5.8E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 5.8E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 SUPERFAMILY SSF56327 151 309 6.34E-52 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 309 7.3E-28 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 SUPERFAMILY SSF51735 2 147 5.65E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3870 caa61279401387f43453b9f709e1f4b1 312 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 311 5.2E-163 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 PIRSF PIRSF000102 2 311 1.1E-105 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 Gene3D G3DSA:3.90.110.10 150 310 1.1E-61 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_3870 caa61279401387f43453b9f709e1f4b1 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 3.8E-42 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 24 692 0.0 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 SUPERFAMILY SSF56784 309 575 2.41E-41 T 14-10-2018 IPR036412 HAD-like superfamily MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 Gene3D G3DSA:3.40.1110.10 332 462 3.1E-44 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 170 184 5.4E-26 T 14-10-2018 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 479 489 5.4E-26 T 14-10-2018 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 551 5.4E-26 T 14-10-2018 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 567 5.4E-26 T 14-10-2018 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 321 335 5.4E-26 T 14-10-2018 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 457 468 5.4E-26 T 14-10-2018 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 Gene3D G3DSA:3.40.50.1000 463 580 1.0E-27 T 14-10-2018 IPR023214 HAD superfamily MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 SUPERFAMILY SSF81653 127 223 1.96E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 SUPERFAMILY SSF81665 50 677 2.09E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 Pfam PF00702 haloacid dehalogenase-like hydrolase 317 546 5.0E-37 T 14-10-2018 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 28 696 39.733 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 323 329 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 Gene3D G3DSA:2.70.150.20 122 227 5.5E-27 T 14-10-2018 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 91 346 4.1E-32 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 384 617 1.9E-48 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_0019 20c08427e3f647c23a82d50373a5b01e 696 Pfam PF00122 E1-E2 ATPase 125 300 9.2E-35 T 14-10-2018 MC28_3982 d65254a514a26846e3503f889704efea 713 Pfam PF00128 Alpha amylase, catalytic domain 258 342 1.3E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_3982 d65254a514a26846e3503f889704efea 713 Pfam PF00128 Alpha amylase, catalytic domain 376 574 1.1E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_3982 d65254a514a26846e3503f889704efea 713 Gene3D G3DSA:2.60.40.10 96 200 3.1E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_3982 d65254a514a26846e3503f889704efea 713 SUPERFAMILY SSF81296 98 200 5.0E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_3982 d65254a514a26846e3503f889704efea 713 Gene3D G3DSA:3.20.20.80 201 622 5.2E-171 T 14-10-2018 MC28_3982 d65254a514a26846e3503f889704efea 713 SMART SM00642 227 613 1.2E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_3982 d65254a514a26846e3503f889704efea 713 Gene3D G3DSA:2.60.40.2320 1 95 2.3E-33 T 14-10-2018 MC28_3982 d65254a514a26846e3503f889704efea 713 Gene3D G3DSA:2.60.40.1180 623 712 8.9E-25 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_3982 d65254a514a26846e3503f889704efea 713 SUPERFAMILY SSF51445 206 620 3.11E-119 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_3982 d65254a514a26846e3503f889704efea 713 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 94 690 3.0E-263 T 14-10-2018 IPR011840 Pullulanase, type I MC28_3982 d65254a514a26846e3503f889704efea 713 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 105 180 1.3E-12 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 MC28_1251 a2df28ef7a7fdebcd77a3e7d278471c1 558 Gene3D G3DSA:3.10.105.10 303 528 2.9E-176 T 14-10-2018 MC28_1251 a2df28ef7a7fdebcd77a3e7d278471c1 558 SUPERFAMILY SSF53850 45 554 3.26E-117 T 14-10-2018 MC28_1251 a2df28ef7a7fdebcd77a3e7d278471c1 558 Gene3D G3DSA:3.40.190.10 61 545 2.9E-176 T 14-10-2018 MC28_1251 a2df28ef7a7fdebcd77a3e7d278471c1 558 Gene3D G3DSA:3.90.76.10 80 201 2.9E-176 T 14-10-2018 MC28_1251 a2df28ef7a7fdebcd77a3e7d278471c1 558 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 475 1.3E-76 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_1251 a2df28ef7a7fdebcd77a3e7d278471c1 558 PIRSF PIRSF002741 5 558 7.0E-98 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_3275 9ed49ff1c375212f2ac3a959a50f135d 100 Gene3D G3DSA:3.30.720.20 23 100 1.0E-32 T 14-10-2018 IPR038073 YkuJ-like superfamily MC28_3275 9ed49ff1c375212f2ac3a959a50f135d 100 PIRSF PIRSF037356 22 100 4.7E-35 T 14-10-2018 IPR014904 Protein of unknown function DUF1797 MC28_3275 9ed49ff1c375212f2ac3a959a50f135d 100 Pfam PF08796 Protein of unknown function (DUF1797) 29 99 2.0E-26 T 14-10-2018 IPR014904 Protein of unknown function DUF1797 MC28_3275 9ed49ff1c375212f2ac3a959a50f135d 100 SUPERFAMILY SSF143567 24 99 1.7E-26 T 14-10-2018 IPR038073 YkuJ-like superfamily MC28_3794 3ea726d682be1da2f430f036accdb7be 253 SUPERFAMILY SSF54292 2 111 2.96E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 MC28_3794 3ea726d682be1da2f430f036accdb7be 253 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 233 1.8E-40 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3794 3ea726d682be1da2f430f036accdb7be 253 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 117 8.7E-29 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3794 3ea726d682be1da2f430f036accdb7be 253 Gene3D G3DSA:3.10.20.30 1 111 1.1E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_3794 3ea726d682be1da2f430f036accdb7be 253 SUPERFAMILY SSF46548 113 238 2.79E-26 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 MC28_3794 3ea726d682be1da2f430f036accdb7be 253 Pfam PF13183 4Fe-4S dicluster domain 150 225 6.8E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MC28_3794 3ea726d682be1da2f430f036accdb7be 253 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 154 165 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MC28_3794 3ea726d682be1da2f430f036accdb7be 253 Gene3D G3DSA:1.10.1060.10 113 247 1.2E-28 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 MC28_3605 ea082374334d0321bc05d9c225997d50 611 Gene3D G3DSA:3.90.640.10 198 279 3.4E-151 T 14-10-2018 MC28_3605 ea082374334d0321bc05d9c225997d50 611 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 607 36.822 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 MC28_3605 ea082374334d0321bc05d9c225997d50 611 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 SUPERFAMILY SSF100920 354 510 2.88E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 Gene3D G3DSA:1.20.1270.10 477 578 3.2E-24 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 SUPERFAMILY SSF53067 1 157 4.89E-58 T 14-10-2018 MC28_3605 ea082374334d0321bc05d9c225997d50 611 Gene3D G3DSA:3.30.420.40 5 346 3.4E-151 T 14-10-2018 MC28_3605 ea082374334d0321bc05d9c225997d50 611 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 Pfam PF00012 Hsp70 protein 76 573 9.5E-217 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 Gene3D G3DSA:2.60.34.10 348 476 3.4E-57 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 PRINTS PR00301 70kDa heat shock protein signature 53 61 5.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 PRINTS PR00301 70kDa heat shock protein signature 358 377 5.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 PRINTS PR00301 70kDa heat shock protein signature 304 320 5.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 PRINTS PR00301 70kDa heat shock protein signature 439 455 5.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 PRINTS PR00301 70kDa heat shock protein signature 172 182 5.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 PRINTS PR00301 70kDa heat shock protein signature 112 132 5.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 PRINTS PR00301 70kDa heat shock protein signature 335 355 5.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 SUPERFAMILY SSF100934 477 575 1.16E-11 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 MC28_3605 ea082374334d0321bc05d9c225997d50 611 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 3.3E-281 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 MC28_3605 ea082374334d0321bc05d9c225997d50 611 Gene3D G3DSA:3.30.420.40 158 337 3.4E-151 T 14-10-2018 MC28_3605 ea082374334d0321bc05d9c225997d50 611 SUPERFAMILY SSF53067 161 352 2.22E-66 T 14-10-2018 MC28_1198 8cd1d1dafaf0ce7e5f542f0777a682ad 386 Pfam PF01841 Transglutaminase-like superfamily 140 232 1.2E-13 T 14-10-2018 IPR002931 Transglutaminase-like MC28_1198 8cd1d1dafaf0ce7e5f542f0777a682ad 386 SMART SM00460 179 235 1.1E-7 T 14-10-2018 IPR002931 Transglutaminase-like MC28_1198 8cd1d1dafaf0ce7e5f542f0777a682ad 386 SUPERFAMILY SSF54001 134 266 1.42E-23 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_1198 8cd1d1dafaf0ce7e5f542f0777a682ad 386 Gene3D G3DSA:3.10.620.30 90 252 1.8E-21 T 14-10-2018 MC28_4840 d8c77e279dee38be63ece5fbb1c5080f 60 PIRSF PIRSF002211 1 60 1.7E-29 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4840 d8c77e279dee38be63ece5fbb1c5080f 60 SUPERFAMILY SSF55129 3 59 4.06E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily MC28_4840 d8c77e279dee38be63ece5fbb1c5080f 60 Pfam PF00327 Ribosomal protein L30p/L7e 6 55 7.5E-21 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain MC28_4840 d8c77e279dee38be63ece5fbb1c5080f 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 6.4E-27 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4840 d8c77e279dee38be63ece5fbb1c5080f 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site MC28_4840 d8c77e279dee38be63ece5fbb1c5080f 60 Gene3D G3DSA:3.30.1390.20 1 59 2.6E-27 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily MC28_4840 d8c77e279dee38be63ece5fbb1c5080f 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 19.989 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4730 c4cb548c834e7d9b2884d59cbb0da39f 295 ProSitePatterns PS01235 PdxS/SNZ family signature. 206 224 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_4730 c4cb548c834e7d9b2884d59cbb0da39f 295 SUPERFAMILY SSF51366 19 267 2.59E-69 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 MC28_4730 c4cb548c834e7d9b2884d59cbb0da39f 295 Gene3D G3DSA:3.20.20.70 2 295 1.0E-147 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4730 c4cb548c834e7d9b2884d59cbb0da39f 295 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 10 295 8.6E-157 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_4730 c4cb548c834e7d9b2884d59cbb0da39f 295 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 5 295 54.994 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_4730 c4cb548c834e7d9b2884d59cbb0da39f 295 PIRSF PIRSF029271 1 295 6.8E-155 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_4730 c4cb548c834e7d9b2884d59cbb0da39f 295 Pfam PF01680 SOR/SNZ family 8 213 2.3E-106 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_3916 587d8a7529f7134bf69e4539a4c50a7e 324 Gene3D G3DSA:3.40.50.150 82 324 1.7E-50 T 14-10-2018 MC28_3916 587d8a7529f7134bf69e4539a4c50a7e 324 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 116 130 1.2E-6 T 14-10-2018 MC28_3916 587d8a7529f7134bf69e4539a4c50a7e 324 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 237 1.2E-6 T 14-10-2018 MC28_3916 587d8a7529f7134bf69e4539a4c50a7e 324 SUPERFAMILY SSF53335 21 314 7.6E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3916 587d8a7529f7134bf69e4539a4c50a7e 324 Gene3D G3DSA:1.10.150.470 1 80 1.6E-25 T 14-10-2018 MC28_3916 587d8a7529f7134bf69e4539a4c50a7e 324 PIRSF PIRSF026567 1 324 1.3E-144 T 14-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted MC28_3916 587d8a7529f7134bf69e4539a4c50a7e 324 Pfam PF02384 N-6 DNA Methylase 92 313 2.7E-15 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 SUPERFAMILY SSF81296 232 337 1.58E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 Pfam PF03714 Bacterial pullanase-associated domain 42 132 4.8E-22 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 SMART SM00642 354 753 7.5E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 Pfam PF00128 Alpha amylase, catalytic domain 390 486 1.4E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 Pfam PF00128 Alpha amylase, catalytic domain 517 714 2.6E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 SUPERFAMILY SSF49452 40 134 1.34E-26 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 SUPERFAMILY SSF51445 336 761 7.14E-127 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 Gene3D G3DSA:2.60.40.2320 140 229 5.9E-5 T 14-10-2018 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 Gene3D G3DSA:2.60.40.1180 763 852 4.1E-24 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 Gene3D G3DSA:3.20.20.80 339 762 6.9E-180 T 14-10-2018 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 Gene3D G3DSA:2.60.40.1110 38 135 4.9E-27 T 14-10-2018 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 SUPERFAMILY SSF51011 779 850 3.6E-5 T 14-10-2018 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 Gene3D G3DSA:2.60.40.10 230 338 4.2E-30 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 PIRSF PIRSF000463 642 844 0.37 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 PIRSF PIRSF000463 127 550 5.9E-31 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 228 830 1.2E-280 T 14-10-2018 IPR011840 Pullulanase, type I MC28_1929 437f9efb59f6e54df82ea5ff92336d74 857 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 239 316 8.0E-13 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 MC28_2699 ef747e94b8b74c33f799d0bd20867ffd 359 Pfam PF13354 Beta-lactamase enzyme family 50 292 1.2E-15 T 14-10-2018 MC28_2699 ef747e94b8b74c33f799d0bd20867ffd 359 SUPERFAMILY SSF56601 32 340 2.46E-25 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_2699 ef747e94b8b74c33f799d0bd20867ffd 359 Gene3D G3DSA:3.40.710.10 21 352 1.5E-36 T 14-10-2018 MC28_4142 323c41b3c938eb0fb74f3631c0a5b125 482 Pfam PF00501 AMP-binding enzyme 11 387 6.3E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_4142 323c41b3c938eb0fb74f3631c0a5b125 482 Gene3D G3DSA:3.30.300.310 385 482 1.2E-36 T 14-10-2018 MC28_4142 323c41b3c938eb0fb74f3631c0a5b125 482 ProSitePatterns PS00455 Putative AMP-binding domain signature. 145 156 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_4142 323c41b3c938eb0fb74f3631c0a5b125 482 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 475 6.5E-148 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 MC28_4142 323c41b3c938eb0fb74f3631c0a5b125 482 Gene3D G3DSA:3.40.50.12780 1 384 1.1E-122 T 14-10-2018 MC28_4142 323c41b3c938eb0fb74f3631c0a5b125 482 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 5 478 49.581 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 MC28_4142 323c41b3c938eb0fb74f3631c0a5b125 482 SUPERFAMILY SSF56801 4 481 2.22E-140 T 14-10-2018 MC28_4142 323c41b3c938eb0fb74f3631c0a5b125 482 Pfam PF13193 AMP-binding enzyme C-terminal domain 397 469 4.0E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_3089 c74da0cbc18e03b391993fec6edb4250 314 Pfam PF00551 Formyl transferase 3 180 2.6E-39 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MC28_3089 c74da0cbc18e03b391993fec6edb4250 314 Gene3D G3DSA:3.10.25.10 207 314 2.1E-41 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MC28_3089 c74da0cbc18e03b391993fec6edb4250 314 Gene3D G3DSA:3.40.50.170 1 206 1.4E-88 T 14-10-2018 MC28_3089 c74da0cbc18e03b391993fec6edb4250 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 309 1.3E-112 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 MC28_3089 c74da0cbc18e03b391993fec6edb4250 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MC28_3089 c74da0cbc18e03b391993fec6edb4250 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 305 35.527 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 MC28_3089 c74da0cbc18e03b391993fec6edb4250 314 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 1.5E-28 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MC28_3089 c74da0cbc18e03b391993fec6edb4250 314 SUPERFAMILY SSF53328 2 206 4.45E-67 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MC28_3089 c74da0cbc18e03b391993fec6edb4250 314 SUPERFAMILY SSF50486 205 310 1.73E-31 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 SMART SM00851 949 1036 5.6E-26 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Gene3D G3DSA:3.30.470.20 659 929 8.2E-109 T 14-10-2018 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Gene3D G3DSA:3.30.470.20 120 401 2.2E-124 T 14-10-2018 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 SMART SM01209 674 837 0.0024 T 14-10-2018 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 SUPERFAMILY SSF52440 1 127 2.01E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.8E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 3.8E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.8E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.8E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.8E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 3.8E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.8E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 3.7E-81 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 866 2.3E-40 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Gene3D G3DSA:1.10.1030.10 404 546 1.2E-43 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 SUPERFAMILY SSF52335 936 1068 4.45E-32 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 SUPERFAMILY SSF48108 395 546 6.02E-49 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1064 13.486 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 SMART SM01096 420 540 8.7E-63 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Gene3D G3DSA:3.40.50.1380 930 1066 8.9E-37 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.143 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 SUPERFAMILY SSF56059 128 399 6.36E-109 T 14-10-2018 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Gene3D G3DSA:3.40.50.20 1 116 1.7E-48 T 14-10-2018 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 3.6E-41 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 SUPERFAMILY SSF52440 549 668 3.02E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Pfam PF02142 MGS-like domain 950 1036 6.4E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 Gene3D G3DSA:3.40.50.20 547 655 1.2E-46 T 14-10-2018 MC28_3109 5eeb065545513b76a35df0c21022b25d 1072 SUPERFAMILY SSF56059 666 927 1.4E-102 T 14-10-2018 MC28_1178 a507fd7d41d4a570500cb553eaa82585 232 Pfam PF00072 Response regulator receiver domain 7 117 1.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1178 a507fd7d41d4a570500cb553eaa82585 232 Gene3D G3DSA:3.40.50.2300 4 129 6.6E-35 T 14-10-2018 MC28_1178 a507fd7d41d4a570500cb553eaa82585 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 2.3E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1178 a507fd7d41d4a570500cb553eaa82585 232 Gene3D G3DSA:1.10.10.10 130 231 2.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1178 a507fd7d41d4a570500cb553eaa82585 232 SMART SM00862 151 227 1.9E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1178 a507fd7d41d4a570500cb553eaa82585 232 SMART SM00448 5 116 5.3E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1178 a507fd7d41d4a570500cb553eaa82585 232 SUPERFAMILY SSF52172 5 172 2.93E-40 T 14-10-2018 IPR011006 CheY-like superfamily MC28_G266 dedbb7b642df2d67ae16119d14c5611d 220 Pfam PF13702 Lysozyme-like 16 78 1.5E-10 T 14-10-2018 MC28_G266 dedbb7b642df2d67ae16119d14c5611d 220 Pfam PF00877 NlpC/P60 family 113 215 6.7E-22 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_G266 dedbb7b642df2d67ae16119d14c5611d 220 Gene3D G3DSA:1.10.530.10 5 78 5.2E-10 T 14-10-2018 MC28_G266 dedbb7b642df2d67ae16119d14c5611d 220 SUPERFAMILY SSF54001 97 219 1.05E-32 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_G266 dedbb7b642df2d67ae16119d14c5611d 220 Gene3D G3DSA:3.90.1720.10 98 220 9.8E-39 T 14-10-2018 MC28_3806 3e640cbca8cef066a3fe5a8f690f9121 324 Pfam PF01497 Periplasmic binding protein 55 298 2.2E-31 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_3806 3e640cbca8cef066a3fe5a8f690f9121 324 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 301 314 3.1E-6 T 14-10-2018 MC28_3806 3e640cbca8cef066a3fe5a8f690f9121 324 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 104 119 3.1E-6 T 14-10-2018 MC28_3806 3e640cbca8cef066a3fe5a8f690f9121 324 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 72 90 3.1E-6 T 14-10-2018 MC28_3806 3e640cbca8cef066a3fe5a8f690f9121 324 Gene3D G3DSA:3.40.50.1980 31 140 6.9E-29 T 14-10-2018 MC28_3806 3e640cbca8cef066a3fe5a8f690f9121 324 Gene3D G3DSA:3.40.50.1980 144 324 9.6E-37 T 14-10-2018 MC28_3806 3e640cbca8cef066a3fe5a8f690f9121 324 SUPERFAMILY SSF53807 37 315 9.81E-56 T 14-10-2018 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 SUPERFAMILY SSF46977 442 584 1.7E-45 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 Gene3D G3DSA:3.50.50.60 6 402 7.3E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 38 47 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 395 410 1.1E-6 T 14-10-2018 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.1E-6 T 14-10-2018 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 Pfam PF02910 Fumarate reductase flavoprotein C-term 451 578 5.0E-41 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 Gene3D G3DSA:3.90.700.10 257 366 7.3E-125 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 Gene3D G3DSA:1.20.58.100 422 538 6.6E-31 T 14-10-2018 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 5 578 1.8E-281 T 14-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 PIRSF PIRSF000171 1 239 5.1E-19 T 14-10-2018 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 PIRSF PIRSF000171 342 575 2.6E-13 T 14-10-2018 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 Pfam PF00890 FAD binding domain 5 391 6.5E-88 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 SUPERFAMILY SSF56425 230 352 3.14E-31 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 SUPERFAMILY SSF51905 5 430 2.63E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.7E-9 T 14-10-2018 MC28_3795 0decf2fed88e8378afe356d2df22bb09 597 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.7E-9 T 14-10-2018 MC28_5006 cd471dcc50f6302d2dfab34b93ad9029 84 SUPERFAMILY SSF82697 1 80 6.63E-29 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5006 cd471dcc50f6302d2dfab34b93ad9029 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 6.3E-32 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_5006 cd471dcc50f6302d2dfab34b93ad9029 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 80 4.0E-35 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_5006 cd471dcc50f6302d2dfab34b93ad9029 84 Gene3D G3DSA:3.30.1280.10 1 84 1.5E-36 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5006 cd471dcc50f6302d2dfab34b93ad9029 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 21.469 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_5006 cd471dcc50f6302d2dfab34b93ad9029 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 3.8E-32 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_1460 7d2261a5889743755596c6ab42f102a2 474 Gene3D G3DSA:3.40.309.10 250 440 8.6E-160 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_1460 7d2261a5889743755596c6ab42f102a2 474 Pfam PF00171 Aldehyde dehydrogenase family 18 470 1.9E-164 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_1460 7d2261a5889743755596c6ab42f102a2 474 SUPERFAMILY SSF53720 3 473 1.44E-152 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_1460 7d2261a5889743755596c6ab42f102a2 474 Gene3D G3DSA:3.40.605.10 25 461 8.6E-160 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_5035 9bda2cb4d94f3a9f5f4f11c210ae1f4b 485 Pfam PF01425 Amidase 24 465 6.6E-161 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_5035 9bda2cb4d94f3a9f5f4f11c210ae1f4b 485 SUPERFAMILY SSF75304 1 480 1.3E-166 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_5035 9bda2cb4d94f3a9f5f4f11c210ae1f4b 485 ProSitePatterns PS00571 Amidases signature. 151 182 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 MC28_5035 9bda2cb4d94f3a9f5f4f11c210ae1f4b 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 97.567 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_5035 9bda2cb4d94f3a9f5f4f11c210ae1f4b 485 Gene3D G3DSA:3.90.1300.10 2 485 8.1E-199 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_5035 9bda2cb4d94f3a9f5f4f11c210ae1f4b 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 477 1.1E-202 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_3339 8e12202a3745f8acbc2e67ad7647e4dd 121 Pfam PF13054 Protein of unknown function (DUF3915) 1 119 6.1E-68 T 14-10-2018 IPR025026 Protein of unknown function DUF3915 MC28_4301 f07e625d7284ee87c14aadcd64f635e1 265 Pfam PF08241 Methyltransferase domain 59 148 6.8E-12 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_4301 f07e625d7284ee87c14aadcd64f635e1 265 SUPERFAMILY SSF53335 7 234 4.71E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4301 f07e625d7284ee87c14aadcd64f635e1 265 Gene3D G3DSA:3.40.50.150 34 259 3.7E-26 T 14-10-2018 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 SUPERFAMILY SSF46785 1 69 3.2E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 149 8.7E-39 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 Pfam PF02863 Arginine repressor, C-terminal domain 81 146 1.2E-22 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 SUPERFAMILY SSF55252 80 146 3.01E-19 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 127 4.0E-16 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 52.056 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 63 5.6E-19 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 Gene3D G3DSA:3.30.1360.40 68 149 2.2E-24 T 14-10-2018 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 Gene3D G3DSA:1.10.10.10 1 64 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 1.9E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.9E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.9E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_F236 762352ae8cd83da395b1c185b43ff86f 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 1.9E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 SUPERFAMILY SSF88659 205 288 9.91E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 96 109 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 PRINTS PR00046 Major sigma-70 factor signature 240 252 2.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 PRINTS PR00046 Major sigma-70 factor signature 120 128 2.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 PRINTS PR00046 Major sigma-70 factor signature 96 109 2.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 PRINTS PR00046 Major sigma-70 factor signature 272 283 2.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 PRINTS PR00046 Major sigma-70 factor signature 257 272 2.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 257 283 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 Pfam PF04542 Sigma-70 region 2 72 140 3.0E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 34 287 1.6E-157 T 14-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 SUPERFAMILY SSF88946 33 140 1.57E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 67 285 1.3E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 Pfam PF04545 Sigma-70, region 4 237 283 2.1E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 PIRSF PIRSF000770 41 152 2.6E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 PIRSF PIRSF000770 189 289 7.4E-15 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 PIRSF PIRSF000770 152 187 0.49 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 67 287 2.2E-84 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 Gene3D G3DSA:1.20.140.160 143 288 7.0E-24 T 14-10-2018 MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 SUPERFAMILY SSF88659 144 220 2.4E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_3125 d6f84ccb46be33b38bfd67f070b9bcb2 289 Gene3D G3DSA:1.10.601.10 37 140 4.1E-27 T 14-10-2018 MC28_3906 57a6bd8600e448bcb0713796cc2f7460 176 SUPERFAMILY SSF109854 10 173 8.24E-9 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_3906 57a6bd8600e448bcb0713796cc2f7460 176 Pfam PF12867 DinB superfamily 13 172 4.1E-10 T 14-10-2018 IPR024775 DinB-like domain MC28_3906 57a6bd8600e448bcb0713796cc2f7460 176 Gene3D G3DSA:1.20.120.450 2 176 3.0E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_5304 ce471a885930a1c68a3ef77b14d6c075 308 SUPERFAMILY SSF103481 43 148 3.01E-8 T 14-10-2018 MC28_5304 ce471a885930a1c68a3ef77b14d6c075 308 Pfam PF00892 EamA-like transporter family 159 293 7.2E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_5304 ce471a885930a1c68a3ef77b14d6c075 308 Pfam PF00892 EamA-like transporter family 7 146 5.0E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_5304 ce471a885930a1c68a3ef77b14d6c075 308 SUPERFAMILY SSF103481 192 297 1.44E-13 T 14-10-2018 MC28_1355 1ab39a04005519eea04e27a30eb6c647 105 Pfam PF13806 Rieske-like [2Fe-2S] domain 9 104 1.2E-15 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 MC28_1355 1ab39a04005519eea04e27a30eb6c647 105 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 7 104 8.1E-27 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 MC28_1355 1ab39a04005519eea04e27a30eb6c647 105 Gene3D G3DSA:2.102.10.10 3 105 4.2E-29 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 MC28_1355 1ab39a04005519eea04e27a30eb6c647 105 SUPERFAMILY SSF50022 7 105 6.81E-32 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 MC28_4515 dafe5b8114f7d0b693b329bd512f49be 144 Pfam PF07977 FabA-like domain 11 134 7.2E-35 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 MC28_4515 dafe5b8114f7d0b693b329bd512f49be 144 Gene3D G3DSA:3.10.129.10 1 144 3.3E-59 T 14-10-2018 MC28_4515 dafe5b8114f7d0b693b329bd512f49be 144 SUPERFAMILY SSF54637 1 139 6.71E-48 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_4515 dafe5b8114f7d0b693b329bd512f49be 144 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 139 9.2E-58 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 MC28_4515 dafe5b8114f7d0b693b329bd512f49be 144 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 34.67 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 MC28_2890 1147a2cb71dbb98dcba3814bd9c7b15d 297 Gene3D G3DSA:3.60.21.10 64 266 1.1E-24 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_2890 1147a2cb71dbb98dcba3814bd9c7b15d 297 SUPERFAMILY SSF56300 64 291 3.52E-36 T 14-10-2018 MC28_2890 1147a2cb71dbb98dcba3814bd9c7b15d 297 Pfam PF00149 Calcineurin-like phosphoesterase 64 229 2.7E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_0479 ba977b710d33e74b82b1470c5d5e1ec0 196 Gene3D G3DSA:3.40.50.150 22 196 4.1E-31 T 14-10-2018 MC28_0479 ba977b710d33e74b82b1470c5d5e1ec0 196 Pfam PF13649 Methyltransferase domain 49 145 5.3E-18 T 14-10-2018 MC28_0479 ba977b710d33e74b82b1470c5d5e1ec0 196 SUPERFAMILY SSF53335 27 185 7.26E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0924 73434ba801af060fb6e42de54145df25 198 Gene3D G3DSA:3.40.50.1820 3 195 3.2E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0924 73434ba801af060fb6e42de54145df25 198 SUPERFAMILY SSF53474 6 193 7.46E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0924 73434ba801af060fb6e42de54145df25 198 Pfam PF01738 Dienelactone hydrolase family 4 195 2.0E-16 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 MC28_1383 e3876813b538d8b953a80193fa7d6285 144 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 144 4.1E-64 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family MC28_1383 e3876813b538d8b953a80193fa7d6285 144 Gene3D G3DSA:3.40.30.10 25 144 7.6E-52 T 14-10-2018 MC28_1383 e3876813b538d8b953a80193fa7d6285 144 Pfam PF06491 Disulphide isomerase 8 144 7.1E-61 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family MC28_0774 38a7a037ffe43c45dc78cbabe683f1c2 276 Hamap MF_00158 Pantothenate synthetase [panC]. 3 273 37.662 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 MC28_0774 38a7a037ffe43c45dc78cbabe683f1c2 276 Gene3D G3DSA:3.40.50.620 1 171 1.4E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_0774 38a7a037ffe43c45dc78cbabe683f1c2 276 SUPERFAMILY SSF52374 2 274 5.38E-103 T 14-10-2018 MC28_0774 38a7a037ffe43c45dc78cbabe683f1c2 276 Gene3D G3DSA:3.30.1300.10 172 271 2.6E-30 T 14-10-2018 MC28_0774 38a7a037ffe43c45dc78cbabe683f1c2 276 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 20 65 5.1E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MC28_0774 38a7a037ffe43c45dc78cbabe683f1c2 276 Pfam PF02569 Pantoate-beta-alanine ligase 1 271 3.0E-99 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 MC28_0774 38a7a037ffe43c45dc78cbabe683f1c2 276 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 273 1.6E-107 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 MC28_0733 f94dfb3708fc6758aa8f982245954efd 349 SUPERFAMILY SSF51395 22 348 8.9E-84 T 14-10-2018 MC28_0733 f94dfb3708fc6758aa8f982245954efd 349 PIRSF PIRSF003314 2 340 1.4E-121 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 MC28_0733 f94dfb3708fc6758aa8f982245954efd 349 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 3 330 38.042 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 MC28_0733 f94dfb3708fc6758aa8f982245954efd 349 Gene3D G3DSA:3.20.20.70 3 349 4.6E-126 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0733 f94dfb3708fc6758aa8f982245954efd 349 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 5 329 5.9E-119 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 MC28_0733 f94dfb3708fc6758aa8f982245954efd 349 Pfam PF01070 FMN-dependent dehydrogenase 168 323 4.8E-18 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 MC28_2523 208dd487a9e0a5a828ff60ceff7446cb 753 Pfam PF03272 Putative mucin or carbohydrate-binding module 572 683 1.1E-31 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_2523 208dd487a9e0a5a828ff60ceff7446cb 753 Gene3D G3DSA:1.10.390.30 288 450 9.4E-9 T 14-10-2018 MC28_2523 208dd487a9e0a5a828ff60ceff7446cb 753 Gene3D G3DSA:1.10.1740.210 154 281 6.3E-5 T 14-10-2018 MC28_2523 208dd487a9e0a5a828ff60ceff7446cb 753 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 151 414 8.9E-20 T 14-10-2018 IPR031161 Peptidase family M60 domain MC28_2523 208dd487a9e0a5a828ff60ceff7446cb 753 SMART SM01276 64 363 3.6E-43 T 14-10-2018 IPR031161 Peptidase family M60 domain MC28_3412 a6e1960adae5d51aee51cba4b2b546d5 466 Pfam PF00202 Aminotransferase class-III 44 458 2.3E-125 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3412 a6e1960adae5d51aee51cba4b2b546d5 466 PIRSF PIRSF000521 36 461 2.0E-40 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3412 a6e1960adae5d51aee51cba4b2b546d5 466 Gene3D G3DSA:3.90.1150.10 25 458 1.9E-170 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3412 a6e1960adae5d51aee51cba4b2b546d5 466 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 29 458 1.1E-174 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 MC28_3412 a6e1960adae5d51aee51cba4b2b546d5 466 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 17 461 52.728 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 MC28_3412 a6e1960adae5d51aee51cba4b2b546d5 466 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 266 303 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3412 a6e1960adae5d51aee51cba4b2b546d5 466 Gene3D G3DSA:3.40.640.10 79 356 1.9E-170 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3412 a6e1960adae5d51aee51cba4b2b546d5 466 SUPERFAMILY SSF53383 26 460 9.15E-134 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3924 84ff100133507238178fad40837a8bcc 65 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 21 30 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_3924 84ff100133507238178fad40837a8bcc 65 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 39 53 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_3924 84ff100133507238178fad40837a8bcc 65 Gene3D G3DSA:1.10.8.910 6 65 2.2E-31 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily MC28_3924 84ff100133507238178fad40837a8bcc 65 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 6 60 4.9E-23 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 MC28_3357 c50ecb379a85bfd1620ef94c5f127027 183 Pfam PF14097 Stage V sporulation protein AE1 1 177 1.1E-79 T 14-10-2018 IPR025914 Stage V sporulation protein AE MC28_2018 bd10292d8fc06eb613c0057c4eb42155 127 SUPERFAMILY SSF69118 18 121 1.7E-26 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 MC28_2018 bd10292d8fc06eb613c0057c4eb42155 127 Pfam PF02627 Carboxymuconolactone decarboxylase family 34 116 1.6E-19 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 MC28_2018 bd10292d8fc06eb613c0057c4eb42155 127 Gene3D G3DSA:1.20.1290.10 6 123 5.1E-27 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 Gene3D G3DSA:3.40.710.10 325 653 2.4E-201 T 14-10-2018 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 SMART SM00060 677 751 1.4E-7 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 Gene3D G3DSA:2.60.40.10 672 762 5.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 Pfam PF00041 Fibronectin type III domain 678 752 8.3E-10 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 SUPERFAMILY SSF56601 245 659 8.45E-101 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 Gene3D G3DSA:1.10.3810.10 94 287 2.4E-201 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 Gene3D G3DSA:3.90.1310.20 80 536 2.4E-201 T 14-10-2018 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 Pfam PF00905 Penicillin binding protein transpeptidase domain 350 612 6.9E-40 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 94 642 1.9E-171 T 14-10-2018 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 SUPERFAMILY SSF49265 678 759 1.56E-11 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 Pfam PF00912 Transglycosylase 85 260 8.9E-65 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_0783 3709715ba30f47f81a0934aa09ce53d8 883 SUPERFAMILY SSF53955 73 283 5.06E-73 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_E156 b437ac65f33230f341c0fc7364c2de1c 333 TIGRFAM TIGR03395 sphingomy: sphingomyelin phosphodiesterase 37 329 1.9E-136 T 14-10-2018 IPR017766 Sphingomyelinase C/phospholipase C GO:0005576|GO:0008081 MC28_E156 b437ac65f33230f341c0fc7364c2de1c 333 SUPERFAMILY SSF56219 34 330 7.59E-79 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_E156 b437ac65f33230f341c0fc7364c2de1c 333 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 41 288 9.4E-15 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase MC28_E156 b437ac65f33230f341c0fc7364c2de1c 333 Gene3D G3DSA:3.60.10.10 28 330 1.5E-98 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_5301 de34c397766cc5d5b223350a4ad76239 448 PIRSF PIRSF005348 13 448 1.4E-170 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 MC28_5301 de34c397766cc5d5b223350a4ad76239 448 Pfam PF03390 2-hydroxycarboxylate transporter family 32 442 3.3E-161 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 MC28_3577 43ec8f4387d069a3bad2fdf56db08029 436 SMART SM00487 23 224 1.5E-54 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_3577 43ec8f4387d069a3bad2fdf56db08029 436 SUPERFAMILY SSF52540 73 360 5.89E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3577 43ec8f4387d069a3bad2fdf56db08029 436 Gene3D G3DSA:3.40.50.300 220 436 1.8E-46 T 14-10-2018 MC28_3577 43ec8f4387d069a3bad2fdf56db08029 436 Gene3D G3DSA:3.40.50.300 1 218 2.0E-68 T 14-10-2018 MC28_3577 43ec8f4387d069a3bad2fdf56db08029 436 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 4 436 50.535 T 14-10-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 MC28_3577 43ec8f4387d069a3bad2fdf56db08029 436 Pfam PF00270 DEAD/DEAH box helicase 28 196 5.5E-42 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MC28_3577 43ec8f4387d069a3bad2fdf56db08029 436 SMART SM00490 260 341 3.6E-29 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_3577 43ec8f4387d069a3bad2fdf56db08029 436 Pfam PF00271 Helicase conserved C-terminal domain 233 341 2.2E-25 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_1248 53bb025ce9ab7490faabfb5220023619 319 Gene3D G3DSA:3.20.20.70 1 312 9.6E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_1248 53bb025ce9ab7490faabfb5220023619 319 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 294 7.2E-77 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 MC28_1248 53bb025ce9ab7490faabfb5220023619 319 SUPERFAMILY SSF51395 2 307 6.41E-98 T 14-10-2018 MC28_4299 4b40e1aac6a8596923c2366fdcd5f85b 300 SUPERFAMILY SSF103481 191 282 1.02E-7 T 14-10-2018 MC28_4299 4b40e1aac6a8596923c2366fdcd5f85b 300 Pfam PF00892 EamA-like transporter family 150 281 3.7E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 361 373 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 SUPERFAMILY SSF55931 105 442 2.75E-130 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 SMART SM01230 105 354 4.0E-141 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 8.3E-141 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 441 7.5E-185 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 Gene3D G3DSA:3.30.590.10 108 444 2.7E-147 T 14-10-2018 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 98 6.7E-32 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 SUPERFAMILY SSF54368 5 104 1.44E-34 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MC28_2864 cbfedeb917e43a732a05e8f66fbbd139 444 Gene3D G3DSA:3.10.20.70 2 107 3.2E-44 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 PIRSF PIRSF005047 4 573 1.6E-242 T 14-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 Gene3D G3DSA:3.30.210.10 262 327 1.2E-18 T 14-10-2018 IPR037160 DNA polymerase, thumb domain superfamily MC28_3833 9d6beacc5108413a9397d0dd05377887 573 Pfam PF02811 PHP domain 340 467 3.9E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 SMART SM00483 3 317 7.1E-87 T 14-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 Gene3D G3DSA:1.10.150.20 86 151 1.9E-19 T 14-10-2018 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 Pfam PF14716 Helix-hairpin-helix domain 7 72 8.7E-20 T 14-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain MC28_3833 9d6beacc5108413a9397d0dd05377887 573 Gene3D G3DSA:3.30.460.10 155 261 4.7E-23 T 14-10-2018 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 Gene3D G3DSA:3.20.20.140 328 573 2.0E-78 T 14-10-2018 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 SMART SM00481 339 418 1.5E-21 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal MC28_3833 9d6beacc5108413a9397d0dd05377887 573 Pfam PF14520 Helix-hairpin-helix domain 93 146 2.5E-6 T 14-10-2018 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 Pfam PF14791 DNA polymerase beta thumb 256 317 2.8E-19 T 14-10-2018 IPR029398 DNA polymerase beta, thumb domain MC28_3833 9d6beacc5108413a9397d0dd05377887 573 SMART SM00278 126 145 6.8 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 SMART SM00278 91 110 56.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 SMART SM00278 51 70 5.8 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 SUPERFAMILY SSF47802 2 80 4.45E-20 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily MC28_3833 9d6beacc5108413a9397d0dd05377887 573 SUPERFAMILY SSF158702 49 146 1.88E-8 T 14-10-2018 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 SUPERFAMILY SSF81301 155 317 1.7E-45 T 14-10-2018 MC28_3833 9d6beacc5108413a9397d0dd05377887 573 Gene3D G3DSA:1.10.150.110 1 85 1.2E-19 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily MC28_3833 9d6beacc5108413a9397d0dd05377887 573 SUPERFAMILY SSF89550 339 568 8.89E-57 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 MC28_3984 cfbea68d4a98e96f8ccfc3c36d917d53 468 Gene3D G3DSA:3.40.630.10 16 466 5.9E-172 T 14-10-2018 MC28_3984 cfbea68d4a98e96f8ccfc3c36d917d53 468 Gene3D G3DSA:3.30.70.360 206 293 5.9E-172 T 14-10-2018 MC28_3984 cfbea68d4a98e96f8ccfc3c36d917d53 468 SUPERFAMILY SSF53187 5 467 5.43E-62 T 14-10-2018 MC28_3984 cfbea68d4a98e96f8ccfc3c36d917d53 468 Gene3D G3DSA:3.30.70.360 187 382 5.9E-172 T 14-10-2018 MC28_3984 cfbea68d4a98e96f8ccfc3c36d917d53 468 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 14 463 4.1E-174 T 14-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 MC28_3984 cfbea68d4a98e96f8ccfc3c36d917d53 468 Pfam PF01546 Peptidase family M20/M25/M40 87 464 3.5E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_3984 cfbea68d4a98e96f8ccfc3c36d917d53 468 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 117 156 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 MC28_3984 cfbea68d4a98e96f8ccfc3c36d917d53 468 SUPERFAMILY SSF55031 187 376 6.16E-53 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_3817 660a87b74baf200249397d3afd25a107 306 Pfam PF00512 His Kinase A (phospho-acceptor) domain 80 147 2.6E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_3817 660a87b74baf200249397d3afd25a107 306 PRINTS PR00344 Bacterial sensor protein C-terminal signature 248 258 2.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3817 660a87b74baf200249397d3afd25a107 306 PRINTS PR00344 Bacterial sensor protein C-terminal signature 230 244 2.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3817 660a87b74baf200249397d3afd25a107 306 PRINTS PR00344 Bacterial sensor protein C-terminal signature 265 283 2.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3817 660a87b74baf200249397d3afd25a107 306 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 302 2.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3817 660a87b74baf200249397d3afd25a107 306 SUPERFAMILY SSF55874 138 301 4.98E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3817 660a87b74baf200249397d3afd25a107 306 Gene3D G3DSA:1.10.287.130 71 151 1.2E-16 T 14-10-2018 MC28_3817 660a87b74baf200249397d3afd25a107 306 Gene3D G3DSA:3.30.565.10 152 305 1.5E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3817 660a87b74baf200249397d3afd25a107 306 SMART SM00387 193 305 2.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3817 660a87b74baf200249397d3afd25a107 306 SMART SM00388 80 147 9.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_3817 660a87b74baf200249397d3afd25a107 306 SUPERFAMILY SSF47384 68 148 3.34E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_3817 660a87b74baf200249397d3afd25a107 306 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 198 301 1.0E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4854 f6a9668d93be01ca5ae74f21c899fcf2 257 Gene3D G3DSA:3.30.70.580 9 115 8.2E-35 T 14-10-2018 MC28_4854 f6a9668d93be01ca5ae74f21c899fcf2 257 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 13 250 7.2E-67 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_4854 f6a9668d93be01ca5ae74f21c899fcf2 257 Pfam PF01416 tRNA pseudouridine synthase 18 114 1.1E-8 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_4854 f6a9668d93be01ca5ae74f21c899fcf2 257 Pfam PF01416 tRNA pseudouridine synthase 154 256 1.1E-33 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_4854 f6a9668d93be01ca5ae74f21c899fcf2 257 SUPERFAMILY SSF55120 10 257 2.88E-84 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_4854 f6a9668d93be01ca5ae74f21c899fcf2 257 Gene3D G3DSA:3.30.70.660 117 254 1.3E-48 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 MC28_4854 f6a9668d93be01ca5ae74f21c899fcf2 257 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 12 255 35.743 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_4854 f6a9668d93be01ca5ae74f21c899fcf2 257 PIRSF PIRSF001430 11 257 3.2E-83 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_4664 2aad596772f17d82974cc75831131c4b 517 Pfam PF00005 ABC transporter 342 468 1.1E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4664 2aad596772f17d82974cc75831131c4b 517 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4664 2aad596772f17d82974cc75831131c4b 517 SUPERFAMILY SSF52540 316 510 3.5E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4664 2aad596772f17d82974cc75831131c4b 517 Pfam PF12848 ABC transporter 230 315 6.8E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain MC28_4664 2aad596772f17d82974cc75831131c4b 517 Gene3D G3DSA:3.40.50.300 3 285 9.2E-63 T 14-10-2018 MC28_4664 2aad596772f17d82974cc75831131c4b 517 SUPERFAMILY SSF52540 4 232 2.0E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4664 2aad596772f17d82974cc75831131c4b 517 SMART SM00382 28 236 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4664 2aad596772f17d82974cc75831131c4b 517 SMART SM00382 349 514 9.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4664 2aad596772f17d82974cc75831131c4b 517 Pfam PF00005 ABC transporter 20 191 2.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4664 2aad596772f17d82974cc75831131c4b 517 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4664 2aad596772f17d82974cc75831131c4b 517 Gene3D G3DSA:3.40.50.300 288 517 2.5E-43 T 14-10-2018 MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 Gene3D G3DSA:3.40.930.10 482 633 2.4E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 535 551 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 96 441 4.8E-96 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 1 77 2.9E-8 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 490 632 8.4E-36 T 14-10-2018 IPR002178 PTS EIIA type-2 domain MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 492 617 2.1E-40 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 Pfam PF02378 Phosphotransferase system, EIIC 111 386 6.1E-20 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 SUPERFAMILY SSF55804 485 632 1.44E-36 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 Gene3D G3DSA:3.40.50.2300 1 87 7.5E-28 T 14-10-2018 MC28_F234 fec10bfc5b82bacc6bb32ebebf8d3522 634 SUPERFAMILY SSF52794 1 86 6.54E-25 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 MC28_1470 c019ce28810ba44e768d45e4e860f130 473 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 21 427 3.5E-193 T 14-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 MC28_1470 c019ce28810ba44e768d45e4e860f130 473 SUPERFAMILY SSF102114 114 355 6.41E-32 T 14-10-2018 MC28_1470 c019ce28810ba44e768d45e4e860f130 473 PIRSF PIRSF004911 3 401 1.6E-159 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase MC28_1470 c019ce28810ba44e768d45e4e860f130 473 Pfam PF12544 Lysine-2,3-aminomutase 321 447 6.6E-62 T 14-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain MC28_1470 c019ce28810ba44e768d45e4e860f130 473 Pfam PF13353 4Fe-4S single cluster domain 127 199 4.4E-5 T 14-10-2018 MC28_1470 c019ce28810ba44e768d45e4e860f130 473 Gene3D G3DSA:2.40.50.600 349 414 1.2E-21 T 14-10-2018 MC28_1470 c019ce28810ba44e768d45e4e860f130 473 Gene3D G3DSA:3.20.20.70 63 348 1.9E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_1470 c019ce28810ba44e768d45e4e860f130 473 TIGRFAM TIGR00238 TIGR00238: KamA family protein 14 342 4.3E-147 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 21.212 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 Gene3D G3DSA:3.40.50.620 24 620 3.4E-267 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 Gene3D G3DSA:1.10.730.20 631 918 3.0E-102 T 14-10-2018 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 SUPERFAMILY SSF50677 202 392 2.83E-65 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 Gene3D G3DSA:3.90.740.10 193 397 3.4E-267 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 6.8E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 518 531 6.8E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 6.8E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 552 561 6.8E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 390 405 6.8E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 SUPERFAMILY SSF52374 1 639 4.77E-156 T 14-10-2018 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 632 8.5E-224 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 Pfam PF08264 Anticodon-binding domain of tRNA 676 829 2.0E-31 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 831 0.0 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 Pfam PF06827 Zinc finger found in FPG and IleRS 885 914 8.4E-8 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 MC28_3118 afd85e48ff2d6b523d17a01593af9dd8 921 SUPERFAMILY SSF47323 643 917 1.27E-80 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_0331 245cc41b3d8fcd2b6c2f1036bd2ba04d 302 Pfam PF02517 CAAX protease self-immunity 194 291 4.7E-16 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 Pfam PF14450 Cell division protein FtsA 182 343 2.6E-22 T 14-10-2018 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 3 346 4.8E-114 T 14-10-2018 IPR020823 Cell division protein FtsA MC28_3129 0f2efea2c3822536f7145c346ca64869 412 Gene3D G3DSA:3.30.420.40 172 326 5.9E-102 T 14-10-2018 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 SUPERFAMILY SSF53067 174 345 1.16E-41 T 14-10-2018 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 Gene3D G3DSA:3.30.1490.110 60 144 5.9E-102 T 14-10-2018 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 Pfam PF02491 SHS2 domain inserted in FTSA 60 137 5.4E-24 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 SUPERFAMILY SSF53067 2 169 1.3E-47 T 14-10-2018 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 411 26.982 T 14-10-2018 IPR020823 Cell division protein FtsA MC28_3129 0f2efea2c3822536f7145c346ca64869 412 Gene3D G3DSA:3.30.420.40 3 331 5.9E-102 T 14-10-2018 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 Pfam PF11983 Membrane-attachment and polymerisation-promoting switch 347 412 2.0E-8 T 14-10-2018 IPR021873 Cell division protein FtsA, C-terminal MC28_3129 0f2efea2c3822536f7145c346ca64869 412 PIRSF PIRSF003101 1 411 8.6E-135 T 14-10-2018 IPR020823 Cell division protein FtsA MC28_3129 0f2efea2c3822536f7145c346ca64869 412 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 183 196 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 SMART SM00842 1 171 8.3E-73 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 MC28_3129 0f2efea2c3822536f7145c346ca64869 412 Gene3D G3DSA:3.90.640.10 210 275 5.9E-102 T 14-10-2018 MC28_4049 531076d353ad6fb8cb319200aa92adac 200 SUPERFAMILY SSF53448 1 193 1.88E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4049 531076d353ad6fb8cb319200aa92adac 200 Pfam PF12804 MobA-like NTP transferase domain 6 154 7.0E-30 T 14-10-2018 IPR025877 MobA-like NTP transferase MC28_4049 531076d353ad6fb8cb319200aa92adac 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 2 193 23.318 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 MC28_4049 531076d353ad6fb8cb319200aa92adac 200 Gene3D G3DSA:3.90.550.10 7 200 1.2E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_5227 723ab2bab9b7e64b381ab9c9764fcac5 430 SUPERFAMILY SSF56601 120 425 1.61E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_5227 723ab2bab9b7e64b381ab9c9764fcac5 430 Pfam PF00144 Beta-lactamase 133 413 1.0E-56 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_5227 723ab2bab9b7e64b381ab9c9764fcac5 430 Gene3D G3DSA:3.40.710.10 118 419 3.7E-82 T 14-10-2018 MC28_3538 a2265014f2d1083a3e67a809b0607532 464 SUPERFAMILY SSF118215 31 443 1.29E-94 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_3538 a2265014f2d1083a3e67a809b0607532 464 Pfam PF00375 Sodium:dicarboxylate symporter family 32 443 2.8E-100 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 MC28_3538 a2265014f2d1083a3e67a809b0607532 464 Gene3D G3DSA:1.10.3860.10 20 461 7.0E-107 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_3538 a2265014f2d1083a3e67a809b0607532 464 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.1E-17 T 14-10-2018 MC28_3538 a2265014f2d1083a3e67a809b0607532 464 PRINTS PR00173 Glutamate-aspartate symporter signature 106 131 1.1E-17 T 14-10-2018 MC28_3538 a2265014f2d1083a3e67a809b0607532 464 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.1E-17 T 14-10-2018 MC28_3538 a2265014f2d1083a3e67a809b0607532 464 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 1.1E-17 T 14-10-2018 MC28_3538 a2265014f2d1083a3e67a809b0607532 464 PRINTS PR00173 Glutamate-aspartate symporter signature 76 96 1.1E-17 T 14-10-2018 MC28_4997 154bbe1260489790af57910ca6d2ce38 643 Gene3D G3DSA:3.40.50.2000 132 166 2.6E-23 T 14-10-2018 MC28_4997 154bbe1260489790af57910ca6d2ce38 643 Pfam PF00534 Glycosyl transferases group 1 180 335 1.9E-14 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_4997 154bbe1260489790af57910ca6d2ce38 643 Gene3D G3DSA:3.90.550.10 323 639 9.8E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4997 154bbe1260489790af57910ca6d2ce38 643 SUPERFAMILY SSF53448 368 612 3.38E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4997 154bbe1260489790af57910ca6d2ce38 643 Pfam PF00535 Glycosyl transferase family 2 370 481 1.8E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_4997 154bbe1260489790af57910ca6d2ce38 643 SUPERFAMILY SSF53756 7 363 2.62E-43 T 14-10-2018 MC28_4997 154bbe1260489790af57910ca6d2ce38 643 Gene3D G3DSA:3.40.50.2000 167 313 2.6E-23 T 14-10-2018 MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 PIRSF PIRSF002939 5 216 2.2E-111 T 14-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 SMART SM00421 160 209 0.0091 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 Pfam PF04542 Sigma-70 region 2 36 105 5.5E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 SUPERFAMILY SSF88659 123 210 1.57E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 Pfam PF08281 Sigma-70, region 4 162 205 1.1E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 13 210 2.9E-117 T 14-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 SUPERFAMILY SSF88946 17 105 9.03E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 209 4.3E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_4806 a6727c7cfbd4d74359595b6d82480aed 219 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 60 73 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 SUPERFAMILY SSF48179 205 324 1.02E-20 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 207 304 9.5E-10 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 SUPERFAMILY SSF52096 482 790 1.28E-38 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 Gene3D G3DSA:3.40.50.720 1 207 1.4E-65 T 14-10-2018 MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 204 1.4E-43 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 Pfam PF00378 Enoyl-CoA hydratase/isomerase 489 623 1.0E-11 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 SUPERFAMILY SSF51735 1 205 2.46E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 Gene3D G3DSA:1.10.1040.10 208 333 2.0E-18 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 Gene3D G3DSA:1.10.1040.10 359 474 2.0E-7 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 SUPERFAMILY SSF48179 356 458 7.48E-19 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_4274 ea6bacf87a7d2492635869f2152a30d4 793 Gene3D G3DSA:3.90.226.10 484 669 4.5E-28 T 14-10-2018 MC28_5379 677d3501dec5464b652941f146a4a511 230 SUPERFAMILY SSF52172 2 165 7.68E-43 T 14-10-2018 IPR011006 CheY-like superfamily MC28_5379 677d3501dec5464b652941f146a4a511 230 SMART SM00448 2 112 1.7E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5379 677d3501dec5464b652941f146a4a511 230 SMART SM00862 143 220 4.0E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_5379 677d3501dec5464b652941f146a4a511 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 219 1.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_5379 677d3501dec5464b652941f146a4a511 230 Pfam PF00072 Response regulator receiver domain 4 113 5.6E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5379 677d3501dec5464b652941f146a4a511 230 Gene3D G3DSA:3.40.50.2300 1 124 1.7E-40 T 14-10-2018 MC28_5379 677d3501dec5464b652941f146a4a511 230 Gene3D G3DSA:1.10.10.10 125 227 2.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5379 677d3501dec5464b652941f146a4a511 230 SUPERFAMILY SSF46894 142 220 2.98E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_3465 1ae6e210c4f5caa04ad5fcb7540d334b 432 Pfam PF13180 PDZ domain 141 194 2.7E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_3465 1ae6e210c4f5caa04ad5fcb7540d334b 432 Gene3D G3DSA:2.30.42.10 139 218 2.0E-15 T 14-10-2018 MC28_3465 1ae6e210c4f5caa04ad5fcb7540d334b 432 SUPERFAMILY SSF50494 348 415 4.81E-7 T 14-10-2018 IPR009003 Peptidase S1, PA clan MC28_3465 1ae6e210c4f5caa04ad5fcb7540d334b 432 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 7 422 6.7E-181 T 14-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B MC28_3465 1ae6e210c4f5caa04ad5fcb7540d334b 432 Pfam PF05580 SpoIVB peptidase S55 209 417 7.1E-85 T 14-10-2018 IPR008763 Peptidase S55, SpoIVB MC28_3465 1ae6e210c4f5caa04ad5fcb7540d334b 432 SMART SM00228 116 192 8.0E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_3465 1ae6e210c4f5caa04ad5fcb7540d334b 432 SUPERFAMILY SSF50156 143 228 5.52E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Gene3D G3DSA:1.10.1200.230 620 703 0.0 T 14-10-2018 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Pfam PF00271 Helicase conserved C-terminal domain 419 529 1.1E-4 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 ProSitePatterns PS01312 SecA family signature. 480 495 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Gene3D G3DSA:3.40.50.300 397 569 0.0 T 14-10-2018 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 PRINTS PR00906 SecA protein signature 99 113 3.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 PRINTS PR00906 SecA protein signature 115 125 3.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 PRINTS PR00906 SecA protein signature 168 188 3.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 PRINTS PR00906 SecA protein signature 61 85 3.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 PRINTS PR00906 SecA protein signature 393 406 3.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 PRINTS PR00906 SecA protein signature 319 341 3.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 PRINTS PR00906 SecA protein signature 356 373 3.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 SUPERFAMILY SSF81767 225 348 2.49E-48 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Gene3D G3DSA:3.40.50.300 14 396 0.0 T 14-10-2018 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Pfam PF07516 SecA Wing and Scaffold domain 567 776 2.4E-64 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Pfam PF07517 SecA DEAD-like domain 6 382 2.3E-130 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 SUPERFAMILY SSF81886 570 823 3.66E-80 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 14-10-2018 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Pfam PF02810 SEC-C motif 815 832 4.6E-8 T 14-10-2018 IPR004027 SEC-C motif MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 SMART SM00958 226 338 3.9E-66 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 SUPERFAMILY SSF52540 5 395 4.46E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 499 1.3E-242 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 SMART SM00957 5 382 2.8E-288 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Gene3D G3DSA:1.10.3060.10 570 775 0.0 T 14-10-2018 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Pfam PF01043 SecA preprotein cross-linking domain 230 338 7.5E-42 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 SUPERFAMILY SSF52540 398 568 2.58E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4422 4ec847bcaff34ec015fa17d8534828aa 835 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 779 19.685 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MC28_0050 ba5f5f3be84446517bc444fbe3ddf6df 191 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 14 38 - T 14-10-2018 IPR001455 TusA-like domain MC28_0050 ba5f5f3be84446517bc444fbe3ddf6df 191 Pfam PF01206 Sulfurtransferase TusA 13 79 1.3E-20 T 14-10-2018 IPR001455 TusA-like domain MC28_0050 ba5f5f3be84446517bc444fbe3ddf6df 191 Gene3D G3DSA:3.30.110.40 6 79 2.4E-27 T 14-10-2018 IPR036868 TusA-like domain superfamily MC28_0050 ba5f5f3be84446517bc444fbe3ddf6df 191 Gene3D G3DSA:3.40.250.10 80 191 4.2E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0050 ba5f5f3be84446517bc444fbe3ddf6df 191 SMART SM00450 98 191 5.7E-22 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0050 ba5f5f3be84446517bc444fbe3ddf6df 191 SUPERFAMILY SSF52821 83 187 2.49E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0050 ba5f5f3be84446517bc444fbe3ddf6df 191 Pfam PF00581 Rhodanese-like domain 99 186 6.7E-13 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0050 ba5f5f3be84446517bc444fbe3ddf6df 191 SUPERFAMILY SSF64307 4 81 4.06E-24 T 14-10-2018 IPR036868 TusA-like domain superfamily MC28_F115 94bd165390b37d9dd556f3929573b713 234 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 229 2.8E-57 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.6E-44 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.6E-44 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 PRINTS PR00783 Major intrinsic protein family signature 44 68 1.6E-44 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 PRINTS PR00783 Major intrinsic protein family signature 81 100 1.6E-44 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 PRINTS PR00783 Major intrinsic protein family signature 213 233 1.6E-44 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 PRINTS PR00783 Major intrinsic protein family signature 166 188 1.6E-44 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 SUPERFAMILY SSF81338 2 233 5.89E-71 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 Gene3D G3DSA:1.20.1080.10 1 234 6.2E-77 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 Pfam PF00230 Major intrinsic protein 4 229 3.3E-45 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_F115 94bd165390b37d9dd556f3929573b713 234 ProSitePatterns PS00221 MIP family signature. 62 70 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 Gene3D G3DSA:2.40.10.10 77 192 2.3E-27 T 14-10-2018 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 SUPERFAMILY SSF50494 92 309 4.73E-59 T 14-10-2018 IPR009003 Peptidase S1, PA clan MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 Pfam PF13365 Trypsin-like peptidase domain 129 274 2.9E-34 T 14-10-2018 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 SMART SM00228 312 400 1.1E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 SUPERFAMILY SSF50156 293 409 4.34E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 Gene3D G3DSA:2.40.10.10 194 314 1.4E-41 T 14-10-2018 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 Gene3D G3DSA:2.30.42.10 315 415 9.9E-25 T 14-10-2018 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 PRINTS PR00834 HtrA/DegQ protease family signature 267 284 4.7E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 4.7E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 PRINTS PR00834 HtrA/DegQ protease family signature 141 153 4.7E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 PRINTS PR00834 HtrA/DegQ protease family signature 203 227 4.7E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 PRINTS PR00834 HtrA/DegQ protease family signature 162 182 4.7E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 PRINTS PR00834 HtrA/DegQ protease family signature 357 369 4.7E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_G293 f7e6f4f3a6675ea5dcba5a1eed456908 416 Pfam PF13180 PDZ domain 312 409 1.2E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_2971 e12fb6c23a71edcef83c3a69478bbf85 55 Gene3D G3DSA:3.40.50.1950 1 55 3.7E-13 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 MC28_5430 ba32ac807d72128c0e771b98b436020f 236 Pfam PF13529 Peptidase_C39 like family 48 207 3.8E-41 T 14-10-2018 IPR039564 Peptidase C39-like MC28_5430 ba32ac807d72128c0e771b98b436020f 236 PIRSF PIRSF032442 23 236 9.0E-75 T 14-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 MC28_5430 ba32ac807d72128c0e771b98b436020f 236 Gene3D G3DSA:3.90.70.10 41 236 1.5E-80 T 14-10-2018 MC28_3528 b97c711e0cb8df8e4bf483df238db285 216 Gene3D G3DSA:2.60.120.620 20 212 1.4E-67 T 14-10-2018 MC28_3528 b97c711e0cb8df8e4bf483df238db285 216 SMART SM00702 39 211 3.2E-41 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 MC28_3528 b97c711e0cb8df8e4bf483df238db285 216 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 114 211 1.2E-17 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 MC28_G153 ad112b6785daaccf4d9edecf931eeec5 138 Pfam PF16219 Domain of unknown function (DUF4879) 23 137 1.2E-28 T 14-10-2018 IPR032624 Protein of unknown function DUF4879 MC28_4387 7e6fd9595e175d44225ec950ee632d42 316 Pfam PF14527 WhiA LAGLIDADG-like domain 125 217 3.0E-37 T 14-10-2018 IPR039518 WhiA, LAGLIDADG-like domain MC28_4387 7e6fd9595e175d44225ec950ee632d42 316 Pfam PF02650 WhiA C-terminal HTH domain 220 304 6.5E-35 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal MC28_4387 7e6fd9595e175d44225ec950ee632d42 316 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 305 2.0E-136 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like MC28_4387 7e6fd9595e175d44225ec950ee632d42 316 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 18 103 3.1E-36 T 14-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain MC28_4387 7e6fd9595e175d44225ec950ee632d42 316 SUPERFAMILY SSF55608 120 221 2.89E-20 T 14-10-2018 IPR027434 Homing endonuclease MC28_4387 7e6fd9595e175d44225ec950ee632d42 316 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 35.539 T 14-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 MC28_4387 7e6fd9595e175d44225ec950ee632d42 316 Gene3D G3DSA:3.10.28.10 1 214 3.1E-67 T 14-10-2018 IPR027434 Homing endonuclease MC28_4387 7e6fd9595e175d44225ec950ee632d42 316 Gene3D G3DSA:1.10.10.10 215 309 7.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0563 8347f9c44e68bcf6208d5bcb4c8cff56 244 Pfam PF04748 Divergent polysaccharide deacetylase 21 235 2.6E-71 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase MC28_0563 8347f9c44e68bcf6208d5bcb4c8cff56 244 SUPERFAMILY SSF88713 18 235 9.23E-66 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_0563 8347f9c44e68bcf6208d5bcb4c8cff56 244 Gene3D G3DSA:3.20.20.370 14 236 2.1E-75 T 14-10-2018 MC28_0361 cffece84d5654b402c9266321e525642 128 ProDom PD031981 GERMINATION SPORE GERPE PE PROBABLE SPORULATION 5 128 2.0E-66 T 14-10-2018 IPR024496 Spore germination protein GerPE MC28_0361 cffece84d5654b402c9266321e525642 128 Pfam PF10970 Spore germination protein GerPE 5 128 8.7E-50 T 14-10-2018 IPR024496 Spore germination protein GerPE MC28_3942 f1a7efb0ab609dba0ca7a40113039936 572 Gene3D G3DSA:3.40.50.12780 17 455 6.5E-122 T 14-10-2018 MC28_3942 f1a7efb0ab609dba0ca7a40113039936 572 Pfam PF00501 AMP-binding enzyme 55 462 7.1E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_3942 f1a7efb0ab609dba0ca7a40113039936 572 Gene3D G3DSA:3.30.300.30 458 571 6.0E-28 T 14-10-2018 MC28_3942 f1a7efb0ab609dba0ca7a40113039936 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_3942 f1a7efb0ab609dba0ca7a40113039936 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 549 4.7E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_3942 f1a7efb0ab609dba0ca7a40113039936 572 SUPERFAMILY SSF56801 20 562 2.09E-162 T 14-10-2018 MC28_1728 e453dd7cc2a75de604e50cab539b1f2e 322 PIRSF PIRSF037004 1 316 5.3E-123 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 MC28_1728 e453dd7cc2a75de604e50cab539b1f2e 322 Pfam PF04463 Protein of unknown function (DUF523) 9 149 3.4E-35 T 14-10-2018 IPR007553 Domain of unknown function DUF523 MC28_1728 e453dd7cc2a75de604e50cab539b1f2e 322 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 6.2E-41 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 MC28_1086 0266079dd119b9a0db5733b682f95142 482 Gene3D G3DSA:3.10.620.30 293 430 3.4E-23 T 14-10-2018 MC28_1086 0266079dd119b9a0db5733b682f95142 482 Pfam PF01473 Putative cell wall binding repeat 70 87 2.6E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_1086 0266079dd119b9a0db5733b682f95142 482 Pfam PF01473 Putative cell wall binding repeat 129 147 1.4E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_1086 0266079dd119b9a0db5733b682f95142 482 Pfam PF01473 Putative cell wall binding repeat 109 127 1.4E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_1086 0266079dd119b9a0db5733b682f95142 482 Pfam PF01473 Putative cell wall binding repeat 189 206 7.3E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_1086 0266079dd119b9a0db5733b682f95142 482 Pfam PF01473 Putative cell wall binding repeat 149 167 1.4E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_1086 0266079dd119b9a0db5733b682f95142 482 Pfam PF01473 Putative cell wall binding repeat 49 67 1.4E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_1086 0266079dd119b9a0db5733b682f95142 482 Pfam PF01473 Putative cell wall binding repeat 90 107 2.6E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_1086 0266079dd119b9a0db5733b682f95142 482 Pfam PF01473 Putative cell wall binding repeat 170 187 3.8E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_1086 0266079dd119b9a0db5733b682f95142 482 SUPERFAMILY SSF54001 308 426 8.24E-27 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_1086 0266079dd119b9a0db5733b682f95142 482 Gene3D G3DSA:2.10.270.10 15 119 2.8E-35 T 14-10-2018 MC28_1086 0266079dd119b9a0db5733b682f95142 482 Pfam PF01841 Transglutaminase-like superfamily 320 411 2.0E-14 T 14-10-2018 IPR002931 Transglutaminase-like MC28_1086 0266079dd119b9a0db5733b682f95142 482 Gene3D G3DSA:2.10.270.10 120 166 3.7E-21 T 14-10-2018 MC28_1086 0266079dd119b9a0db5733b682f95142 482 Gene3D G3DSA:2.10.270.10 167 223 4.6E-12 T 14-10-2018 MC28_1086 0266079dd119b9a0db5733b682f95142 482 SMART SM00460 358 414 9.4E-12 T 14-10-2018 IPR002931 Transglutaminase-like MC28_1086 0266079dd119b9a0db5733b682f95142 482 SUPERFAMILY SSF69360 91 216 5.82E-50 T 14-10-2018 MC28_2499 c594767eca933e1095e2c5eda65fa161 435 SUPERFAMILY SSF56176 345 430 3.27E-18 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_2499 c594767eca933e1095e2c5eda65fa161 435 SUPERFAMILY SSF54631 197 334 2.4E-30 T 14-10-2018 MC28_2499 c594767eca933e1095e2c5eda65fa161 435 Gene3D G3DSA:3.10.580.10 188 340 1.6E-50 T 14-10-2018 MC28_2499 c594767eca933e1095e2c5eda65fa161 435 Pfam PF03471 Transporter associated domain 351 422 8.2E-18 T 14-10-2018 IPR005170 Transporter-associated domain MC28_2499 c594767eca933e1095e2c5eda65fa161 435 SMART SM01091 347 424 1.1E-20 T 14-10-2018 IPR005170 Transporter-associated domain MC28_2499 c594767eca933e1095e2c5eda65fa161 435 Pfam PF00571 CBS domain 281 331 5.0E-7 T 14-10-2018 IPR000644 CBS domain MC28_2499 c594767eca933e1095e2c5eda65fa161 435 Gene3D G3DSA:3.30.465.10 341 432 2.0E-18 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 MC28_2499 c594767eca933e1095e2c5eda65fa161 435 Pfam PF01595 Domain of unknown function DUF21 2 194 5.9E-50 T 14-10-2018 IPR002550 CNNM, transmembrane domain MC28_4386 7f3c1313624b107cdd70fa56a796658d 82 Gene3D G3DSA:3.30.1340.10 1 82 2.0E-36 T 14-10-2018 IPR035895 HPr-like superfamily MC28_4386 7f3c1313624b107cdd70fa56a796658d 82 Pfam PF00381 PTS HPr component phosphorylation site 3 81 6.0E-30 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_4386 7f3c1313624b107cdd70fa56a796658d 82 SUPERFAMILY SSF55594 3 81 4.19E-28 T 14-10-2018 IPR035895 HPr-like superfamily MC28_4386 7f3c1313624b107cdd70fa56a796658d 82 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 2 81 4.1E-30 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_4386 7f3c1313624b107cdd70fa56a796658d 82 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.1E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_4386 7f3c1313624b107cdd70fa56a796658d 82 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.1E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_4386 7f3c1313624b107cdd70fa56a796658d 82 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.1E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_4386 7f3c1313624b107cdd70fa56a796658d 82 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 Gene3D G3DSA:3.90.190.20 337 491 5.9E-61 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 SUPERFAMILY SSF63418 1 97 1.96E-25 T 14-10-2018 IPR035911 MurE/MurF, N-terminal MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 Gene3D G3DSA:3.40.1390.10 2 96 6.6E-27 T 14-10-2018 MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 Gene3D G3DSA:3.40.1190.10 97 336 1.7E-91 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 Pfam PF08245 Mur ligase middle domain 106 311 4.8E-57 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 483 36.943 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 483 1.2E-172 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 SUPERFAMILY SSF53244 332 486 7.98E-51 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 SUPERFAMILY SSF53623 97 331 4.06E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 417 2.0E-22 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 MC28_3136 ef90fdfa48ce32a0fb4f1461080e1ab8 491 Pfam PF01225 Mur ligase family, catalytic domain 22 93 1.1E-13 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 MC28_4711 3df00855540ebf9dca236f4383238484 283 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 22 199 7.6E-61 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 MC28_4711 3df00855540ebf9dca236f4383238484 283 Gene3D G3DSA:1.10.10.2830 101 215 4.4E-38 T 14-10-2018 MC28_4711 3df00855540ebf9dca236f4383238484 283 Pfam PF02195 ParB-like nuclease domain 26 113 1.8E-27 T 14-10-2018 IPR003115 ParB/Sulfiredoxin MC28_4711 3df00855540ebf9dca236f4383238484 283 SUPERFAMILY SSF110849 29 116 2.2E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily MC28_4711 3df00855540ebf9dca236f4383238484 283 Gene3D G3DSA:3.90.1530.30 38 100 3.6E-28 T 14-10-2018 MC28_4711 3df00855540ebf9dca236f4383238484 283 SMART SM00470 25 114 3.1E-34 T 14-10-2018 IPR003115 ParB/Sulfiredoxin MC28_4711 3df00855540ebf9dca236f4383238484 283 SUPERFAMILY SSF109709 106 217 1.94E-36 T 14-10-2018 MC28_4711 3df00855540ebf9dca236f4383238484 283 Pfam PF01381 Helix-turn-helix 131 164 1.3E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_2861 0814dd84ccb1d654afdfe9398f26e603 549 SUPERFAMILY SSF53335 40 245 4.15E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2861 0814dd84ccb1d654afdfe9398f26e603 549 Pfam PF13727 CoA-binding domain 17 174 7.0E-11 T 14-10-2018 MC28_2861 0814dd84ccb1d654afdfe9398f26e603 549 SUPERFAMILY SSF51735 217 480 2.29E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2861 0814dd84ccb1d654afdfe9398f26e603 549 Pfam PF02719 Polysaccharide biosynthesis protein 219 502 5.1E-124 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain MC28_2861 0814dd84ccb1d654afdfe9398f26e603 549 Gene3D G3DSA:3.40.50.720 74 200 3.3E-35 T 14-10-2018 MC28_2861 0814dd84ccb1d654afdfe9398f26e603 549 Gene3D G3DSA:3.40.50.720 214 543 1.9E-118 T 14-10-2018 MC28_G009 711423aa92dedbc3c96ee006bb00e332 332 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 12 325 1.3E-123 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 MC28_G009 711423aa92dedbc3c96ee006bb00e332 332 Gene3D G3DSA:3.40.1190.20 15 304 8.0E-97 T 14-10-2018 IPR029056 Ribokinase-like MC28_G009 711423aa92dedbc3c96ee006bb00e332 332 Gene3D G3DSA:2.20.150.10 20 116 8.0E-97 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 MC28_G009 711423aa92dedbc3c96ee006bb00e332 332 Hamap MF_01668 5-dehydro-2-deoxygluconokinase [iolC]. 8 329 56.854 T 14-10-2018 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes GO:0016310|GO:0047590 KEGG: 00562+2.7.1.92 MC28_G009 711423aa92dedbc3c96ee006bb00e332 332 SUPERFAMILY SSF53613 12 325 3.27E-73 T 14-10-2018 IPR029056 Ribokinase-like MC28_G009 711423aa92dedbc3c96ee006bb00e332 332 Pfam PF00294 pfkB family carbohydrate kinase 14 317 6.8E-63 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB MC28_G009 711423aa92dedbc3c96ee006bb00e332 332 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 269 282 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 306 320 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 Gene3D G3DSA:1.10.460.10 167 594 1.5E-103 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 393 409 3.5E-16 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 512 526 3.5E-16 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 311 320 3.5E-16 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 107 120 3.5E-16 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 3.5E-16 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 SUPERFAMILY SSF56712 3 597 4.58E-130 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 Pfam PF01751 Toprim domain 5 140 7.6E-10 T 14-10-2018 IPR006171 TOPRIM domain MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 Pfam PF01131 DNA topoisomerase 160 584 1.4E-83 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 SMART SM00437 269 549 8.6E-74 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 Gene3D G3DSA:3.40.50.140 3 161 6.9E-36 T 14-10-2018 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 Gene3D G3DSA:1.10.290.10 278 407 1.5E-103 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 Gene3D G3DSA:2.70.20.10 220 480 1.5E-103 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 SMART SM00493 3 133 1.3E-17 T 14-10-2018 IPR006171 TOPRIM domain MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 Pfam PF13342 C-terminal repeat of topoisomerase 643 700 1.1E-15 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 Pfam PF13342 C-terminal repeat of topoisomerase 823 883 5.6E-15 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 Pfam PF13342 C-terminal repeat of topoisomerase 733 791 1.2E-11 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat MC28_F289 ed5ffe6a6f3b64a500bc2c807bb6a208 885 SMART SM00436 133 226 3.4E-19 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 MC28_4486 ead0c26d93fa020581d3788a298b9744 399 Pfam PF12704 MacB-like periplasmic core domain 21 238 5.4E-31 T 14-10-2018 IPR025857 MacB-like periplasmic core domain MC28_4486 ead0c26d93fa020581d3788a298b9744 399 Pfam PF02687 FtsX-like permease family 305 392 9.5E-15 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 274 381 4.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 Gene3D G3DSA:3.30.565.10 236 385 3.2E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 324 1.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 363 1.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 338 1.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 SUPERFAMILY SSF55874 216 380 1.83E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 SUPERFAMILY SSF47384 144 227 1.71E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 SMART SM00388 160 227 2.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 Pfam PF00512 His Kinase A (phospho-acceptor) domain 160 225 7.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 Gene3D G3DSA:1.10.287.130 104 223 5.9E-22 T 14-10-2018 MC28_1751 8899ffd81573edf7471be1092ec1ad79 385 SMART SM00387 273 384 9.2E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1170 d0e18d316afbfa835edf23b7d0f53723 212 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 16 212 1.9E-80 T 14-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent MC28_1170 d0e18d316afbfa835edf23b7d0f53723 212 Gene3D G3DSA:2.30.110.10 29 156 4.3E-24 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 MC28_1170 d0e18d316afbfa835edf23b7d0f53723 212 SUPERFAMILY SSF50475 26 181 7.46E-19 T 14-10-2018 MC28_1170 d0e18d316afbfa835edf23b7d0f53723 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 37 131 7.6E-12 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 MC28_0895 e518ec0160b9ccd8940ea3ba290b1763 434 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 25 433 1.7E-190 T 14-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_0895 e518ec0160b9ccd8940ea3ba290b1763 434 Gene3D G3DSA:3.40.50.12240 18 434 8.6E-122 T 14-10-2018 MC28_0895 e518ec0160b9ccd8940ea3ba290b1763 434 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 3 433 6.0E-144 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_0895 e518ec0160b9ccd8940ea3ba290b1763 434 SMART SM00382 157 337 3.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0895 e518ec0160b9ccd8940ea3ba290b1763 434 SUPERFAMILY SSF52540 93 358 3.55E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0895 e518ec0160b9ccd8940ea3ba290b1763 434 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 353 6.2E-62 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_0665 d01825976890c6f8f864ea64276211b3 205 Gene3D G3DSA:3.40.50.720 1 127 2.5E-38 T 14-10-2018 MC28_0665 d01825976890c6f8f864ea64276211b3 205 SUPERFAMILY SSF51735 1 107 9.72E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0665 d01825976890c6f8f864ea64276211b3 205 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 201 5.6E-39 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 MC28_0665 d01825976890c6f8f864ea64276211b3 205 Pfam PF14824 Sirohaem biosynthesis protein central 116 142 4.6E-10 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 MC28_0665 d01825976890c6f8f864ea64276211b3 205 Gene3D G3DSA:1.10.8.610 128 201 1.2E-24 T 14-10-2018 MC28_0665 d01825976890c6f8f864ea64276211b3 205 SUPERFAMILY SSF75615 106 195 4.84E-20 T 14-10-2018 MC28_0665 d01825976890c6f8f864ea64276211b3 205 Pfam PF13241 Putative NAD(P)-binding 4 112 6.0E-27 T 14-10-2018 MC28_0663 c406def417f9814b47ece53fed2a1ca3 259 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 MC28_0663 c406def417f9814b47ece53fed2a1ca3 259 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 215 6.3E-53 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 MC28_0663 c406def417f9814b47ece53fed2a1ca3 259 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 MC28_0663 c406def417f9814b47ece53fed2a1ca3 259 SUPERFAMILY SSF53790 1 248 7.85E-85 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 MC28_0663 c406def417f9814b47ece53fed2a1ca3 259 Gene3D G3DSA:3.40.1010.10 1 118 1.7E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 MC28_0663 c406def417f9814b47ece53fed2a1ca3 259 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 239 6.8E-102 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 MC28_0663 c406def417f9814b47ece53fed2a1ca3 259 Gene3D G3DSA:3.30.950.10 119 258 7.7E-52 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 MC28_4034 3fd43983b2543ce2e142b737b2b28d57 49 Gene3D G3DSA:3.40.50.1860 1 48 3.4E-6 T 14-10-2018 MC28_4034 3fd43983b2543ce2e142b737b2b28d57 49 SUPERFAMILY SSF53681 1 45 5.67E-6 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_4138 a0bc96a5ccff13dd822bbffbc8de789c 286 Gene3D G3DSA:3.30.1380.10 68 211 7.3E-80 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_4138 a0bc96a5ccff13dd822bbffbc8de789c 286 Gene3D G3DSA:3.30.200.180 48 284 7.3E-80 T 14-10-2018 MC28_4138 a0bc96a5ccff13dd822bbffbc8de789c 286 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 99 213 2.4E-28 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 MC28_4138 a0bc96a5ccff13dd822bbffbc8de789c 286 SUPERFAMILY SSF55166 93 222 9.81E-27 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Gene3D G3DSA:1.25.40.10 883 996 4.7E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Gene3D G3DSA:3.90.70.10 315 455 3.5E-13 T 14-10-2018 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Gene3D G3DSA:1.25.40.10 1279 1392 4.5E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SUPERFAMILY SSF48452 563 713 3.79E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 1194 1346 1.9E-4 T 14-10-2018 IPR015374 Chs5p-Arf1p binding MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Pfam PF13529 Peptidase_C39 like family 312 418 3.3E-13 T 14-10-2018 IPR039564 Peptidase C39-like MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Pfam PF13432 Tetratricopeptide repeat 739 786 4.3E-4 T 14-10-2018 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Pfam PF13432 Tetratricopeptide repeat 635 695 1.3E-4 T 14-10-2018 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Pfam PF13181 Tetratricopeptide repeat 914 941 1.5E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Gene3D G3DSA:1.25.40.10 511 850 1.4E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SUPERFAMILY SSF48452 730 980 8.72E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Gene3D G3DSA:1.25.40.10 71 179 1.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 1245 1278 380.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 189 222 500.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 1011 1044 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 1279 1312 0.025 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 563 596 72.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 733 766 0.028 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 767 800 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 878 911 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 123 156 140.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 1313 1346 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 597 630 65.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 664 697 2.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SMART SM00028 912 944 0.33 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SUPERFAMILY SSF48452 1141 1379 3.67E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Gene3D G3DSA:1.25.40.10 191 300 8.7E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 SUPERFAMILY SSF48452 123 246 6.32E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Gene3D G3DSA:1.25.40.10 1134 1276 5.9E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1387 94598b631c29bbd7d7d39d031faaeebb 1400 Gene3D G3DSA:1.25.40.10 997 1114 4.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3721 affc22232d55376f4529a1641a31c7a7 509 SUPERFAMILY SSF51905 2 388 7.08E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3721 affc22232d55376f4529a1641a31c7a7 509 SUPERFAMILY SSF56425 219 329 8.22E-34 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3721 affc22232d55376f4529a1641a31c7a7 509 Gene3D G3DSA:3.90.700.10 229 324 1.7E-135 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3721 affc22232d55376f4529a1641a31c7a7 509 Pfam PF00890 FAD binding domain 5 369 4.0E-84 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3721 affc22232d55376f4529a1641a31c7a7 509 SUPERFAMILY SSF46977 411 495 2.35E-25 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3721 affc22232d55376f4529a1641a31c7a7 509 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 490 5.9E-163 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 MC28_3721 affc22232d55376f4529a1641a31c7a7 509 Pfam PF02910 Fumarate reductase flavoprotein C-term 412 494 4.8E-14 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3721 affc22232d55376f4529a1641a31c7a7 509 Gene3D G3DSA:1.20.58.100 395 507 1.5E-24 T 14-10-2018 MC28_3721 affc22232d55376f4529a1641a31c7a7 509 Gene3D G3DSA:3.50.50.60 5 380 1.7E-135 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4507 4d978ef8fe77e1015a8f06b434b5b1b5 409 Pfam PF13440 Polysaccharide biosynthesis protein 30 329 1.1E-16 T 14-10-2018 MC28_4507 4d978ef8fe77e1015a8f06b434b5b1b5 409 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 330 408 2.2E-15 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain MC28_G282 2b0f78d3c477f23f44fba52693192060 118 Pfam PF14470 Bacterial PH domain 12 115 4.1E-19 T 14-10-2018 IPR039519 YokE-like, PH domain MC28_2435 3686368fd53eeab8b804d607697f8b39 228 SMART SM00448 3 113 3.6E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2435 3686368fd53eeab8b804d607697f8b39 228 SUPERFAMILY SSF46894 128 228 3.68E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_2435 3686368fd53eeab8b804d607697f8b39 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.3E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2435 3686368fd53eeab8b804d607697f8b39 228 Pfam PF00072 Response regulator receiver domain 5 114 5.7E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2435 3686368fd53eeab8b804d607697f8b39 228 Gene3D G3DSA:1.10.10.10 129 228 1.8E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2435 3686368fd53eeab8b804d607697f8b39 228 Gene3D G3DSA:3.40.50.2300 1 128 2.9E-38 T 14-10-2018 MC28_2435 3686368fd53eeab8b804d607697f8b39 228 SUPERFAMILY SSF52172 3 128 1.99E-41 T 14-10-2018 IPR011006 CheY-like superfamily MC28_2435 3686368fd53eeab8b804d607697f8b39 228 SMART SM00862 152 228 5.7E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3809 dfd3da6f2cf6428d5987aea28cd91c2f 181 Pfam PF08281 Sigma-70, region 4 123 171 2.8E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_3809 dfd3da6f2cf6428d5987aea28cd91c2f 181 Gene3D G3DSA:1.10.1740.10 4 88 6.6E-14 T 14-10-2018 MC28_3809 dfd3da6f2cf6428d5987aea28cd91c2f 181 Gene3D G3DSA:1.10.10.10 93 176 4.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3809 dfd3da6f2cf6428d5987aea28cd91c2f 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 175 8.9E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_3809 dfd3da6f2cf6428d5987aea28cd91c2f 181 Pfam PF04542 Sigma-70 region 2 22 91 1.5E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3809 dfd3da6f2cf6428d5987aea28cd91c2f 181 SUPERFAMILY SSF88946 3 104 2.88E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3809 dfd3da6f2cf6428d5987aea28cd91c2f 181 SUPERFAMILY SSF88659 116 175 3.74E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 SUPERFAMILY SSF55326 402 570 1.23E-57 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 Gene3D G3DSA:3.30.1330.10 49 197 4.3E-136 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 Gene3D G3DSA:3.90.650.10 34 362 4.3E-136 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 PIRSF PIRSF001587 8 739 0.0 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 359 6.4E-34 T 14-10-2018 IPR010918 PurM-like, C-terminal domain MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 Pfam PF02769 AIR synthase related protein, C-terminal domain 575 710 1.7E-12 T 14-10-2018 IPR010918 PurM-like, C-terminal domain MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 737 0.0 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 SUPERFAMILY SSF56042 571 738 1.79E-38 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 SUPERFAMILY SSF55326 18 201 1.94E-53 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 194 1.1E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 Pfam PF00586 AIR synthase related protein, N-terminal domain 445 562 1.4E-26 T 14-10-2018 IPR016188 PurM-like, N-terminal domain MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 Gene3D G3DSA:3.30.1330.10 391 565 5.4E-63 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 SUPERFAMILY SSF56042 205 430 1.41E-56 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 Gene3D G3DSA:3.90.650.10 569 739 1.3E-40 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily MC28_5008 b9461a88529ef0ce57c939b70bad4b49 739 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 739 330.875 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_2635 3782c6ae464d26ad379b378b50a13aca 513 Pfam PF09154 Domain of unknown function (DUF1939) 465 510 5.5E-7 T 14-10-2018 IPR015237 Alpha-amylase C-terminal, prokaryotic GO:0004553 MC28_2635 3782c6ae464d26ad379b378b50a13aca 513 Gene3D G3DSA:2.40.30.140 132 235 4.8E-166 T 14-10-2018 MC28_2635 3782c6ae464d26ad379b378b50a13aca 513 PIRSF PIRSF001021 7 513 7.4E-234 T 14-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 MC28_2635 3782c6ae464d26ad379b378b50a13aca 513 SUPERFAMILY SSF51011 424 513 2.73E-35 T 14-10-2018 MC28_2635 3782c6ae464d26ad379b378b50a13aca 513 Gene3D G3DSA:3.20.20.80 34 398 4.8E-166 T 14-10-2018 MC28_2635 3782c6ae464d26ad379b378b50a13aca 513 Gene3D G3DSA:2.60.40.1180 427 513 2.0E-35 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_2635 3782c6ae464d26ad379b378b50a13aca 513 SMART SM00642 33 421 1.3E-71 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_2635 3782c6ae464d26ad379b378b50a13aca 513 Pfam PF00128 Alpha amylase, catalytic domain 64 402 1.1E-24 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_2635 3782c6ae464d26ad379b378b50a13aca 513 SUPERFAMILY SSF51445 34 412 2.11E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_4143 4eacc364d2613f2c570cfac0cdbce44d 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 267 9.9E-89 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 MC28_4143 4eacc364d2613f2c570cfac0cdbce44d 272 Gene3D G3DSA:1.10.12.10 210 260 4.3E-29 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal MC28_4143 4eacc364d2613f2c570cfac0cdbce44d 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 55.811 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 MC28_4143 4eacc364d2613f2c570cfac0cdbce44d 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 1.7E-132 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 MC28_4143 4eacc364d2613f2c570cfac0cdbce44d 272 SUPERFAMILY SSF52096 7 267 1.99E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_4143 4eacc364d2613f2c570cfac0cdbce44d 272 Gene3D G3DSA:3.90.226.10 1 209 9.5E-79 T 14-10-2018 MC28_4143 4eacc364d2613f2c570cfac0cdbce44d 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 MC28_F258 38fe35c9fec5fd949a3c9da2e2546f06 335 Pfam PF07690 Major Facilitator Superfamily 2 287 2.3E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_F258 38fe35c9fec5fd949a3c9da2e2546f06 335 SUPERFAMILY SSF103473 2 326 8.76E-46 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_F258 38fe35c9fec5fd949a3c9da2e2546f06 335 Gene3D G3DSA:1.20.1250.20 146 333 2.0E-24 T 14-10-2018 MC28_F258 38fe35c9fec5fd949a3c9da2e2546f06 335 Gene3D G3DSA:1.20.1250.20 1 143 1.6E-15 T 14-10-2018 MC28_3043 a7b156ecdc1cb4410cc999b524b647bf 420 Pfam PF13180 PDZ domain 204 267 4.2E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_3043 a7b156ecdc1cb4410cc999b524b647bf 420 Pfam PF02163 Peptidase family M50 8 406 5.2E-82 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 MC28_3043 a7b156ecdc1cb4410cc999b524b647bf 420 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 419 2.4E-112 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 MC28_3043 a7b156ecdc1cb4410cc999b524b647bf 420 SMART SM00228 185 259 5.3E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_3043 a7b156ecdc1cb4410cc999b524b647bf 420 SUPERFAMILY SSF50156 174 268 8.41E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 MC28_3043 a7b156ecdc1cb4410cc999b524b647bf 420 Gene3D G3DSA:2.30.42.10 201 289 1.2E-23 T 14-10-2018 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 Pfam PF00512 His Kinase A (phospho-acceptor) domain 459 516 1.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 SUPERFAMILY SSF55785 348 451 6.28E-11 T 14-10-2018 IPR035965 PAS domain superfamily MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 Gene3D G3DSA:3.30.450.40 3 176 1.2E-23 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 SMART SM00387 563 669 8.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 Gene3D G3DSA:3.30.565.10 521 672 8.1E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 SUPERFAMILY SSF55874 521 665 1.44E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 Pfam PF08448 PAS fold 344 443 2.2E-5 T 14-10-2018 IPR013656 PAS fold-4 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 Gene3D G3DSA:1.10.287.130 460 517 7.7E-17 T 14-10-2018 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 Pfam PF13185 GAF domain 23 164 1.3E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 566 666 3.5E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 SMART SM00065 24 173 1.1E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 SUPERFAMILY SSF55781 6 189 2.09E-21 T 14-10-2018 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 SUPERFAMILY SSF47384 454 516 2.75E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 615 6.8E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 6.8E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 629 6.8E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 SMART SM00388 457 522 5.8E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 Gene3D G3DSA:3.30.450.40 180 326 5.2E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 Gene3D G3DSA:3.30.450.20 330 442 6.7E-19 T 14-10-2018 MC28_5050 1500b6aa7cf63886066f1d73fefe1d6b 672 SUPERFAMILY SSF55781 262 327 8.07E-5 T 14-10-2018 MC28_2072 922c81ef6b7dd59bbde197de9e4f936f 318 Pfam PF07690 Major Facilitator Superfamily 1 157 7.2E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2072 922c81ef6b7dd59bbde197de9e4f936f 318 Pfam PF07690 Major Facilitator Superfamily 174 311 5.0E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2072 922c81ef6b7dd59bbde197de9e4f936f 318 SUPERFAMILY SSF103473 1 315 3.53E-40 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2072 922c81ef6b7dd59bbde197de9e4f936f 318 Gene3D G3DSA:1.20.1250.20 165 318 1.1E-17 T 14-10-2018 MC28_2072 922c81ef6b7dd59bbde197de9e4f936f 318 Gene3D G3DSA:1.20.1250.20 1 119 7.3E-17 T 14-10-2018 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 PIRSF PIRSF000124 1 429 8.5E-153 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 290 5.4E-40 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 PIRSF PIRSF500134 1 432 1.4E-164 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 SUPERFAMILY SSF48179 198 292 2.38E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 SUPERFAMILY SSF52413 301 425 1.7E-32 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 182 1.4E-61 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 SMART SM00984 312 414 6.0E-39 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 312 413 1.4E-26 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 SUPERFAMILY SSF51735 1 189 9.48E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 410 1.9E-135 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 Gene3D G3DSA:1.20.5.100 198 228 2.6E-19 T 14-10-2018 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 Gene3D G3DSA:3.40.50.720 229 440 4.9E-69 T 14-10-2018 MC28_4434 d91900c23fa06cc3e01bc407bec1c9e2 441 Gene3D G3DSA:3.40.50.720 1 197 2.6E-69 T 14-10-2018 MC28_G137 def98631e9622bd305f941365b073090 626 Gene3D G3DSA:1.10.287.130 398 476 8.8E-19 T 14-10-2018 MC28_G137 def98631e9622bd305f941365b073090 626 Pfam PF00672 HAMP domain 341 387 1.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G137 def98631e9622bd305f941365b073090 626 SMART SM00388 406 471 1.6E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_G137 def98631e9622bd305f941365b073090 626 SMART SM00304 339 391 6.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G137 def98631e9622bd305f941365b073090 626 Gene3D G3DSA:1.20.1480.50 301 397 1.9E-12 T 14-10-2018 MC28_G137 def98631e9622bd305f941365b073090 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 605 1.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G137 def98631e9622bd305f941365b073090 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 580 1.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G137 def98631e9622bd305f941365b073090 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 566 1.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G137 def98631e9622bd305f941365b073090 626 SUPERFAMILY SSF47384 391 471 2.16E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_G137 def98631e9622bd305f941365b073090 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 520 623 9.0E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G137 def98631e9622bd305f941365b073090 626 SUPERFAMILY SSF158472 341 390 1.15E-8 T 14-10-2018 MC28_G137 def98631e9622bd305f941365b073090 626 SUPERFAMILY SSF55874 461 622 2.36E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G137 def98631e9622bd305f941365b073090 626 SMART SM00387 515 626 2.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G137 def98631e9622bd305f941365b073090 626 Gene3D G3DSA:3.30.565.10 477 626 1.8E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G137 def98631e9622bd305f941365b073090 626 Pfam PF00512 His Kinase A (phospho-acceptor) domain 407 471 1.1E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0954 ce4429f2506c2f201fd94fcab259e42a 321 SUPERFAMILY SSF103481 44 150 3.92E-9 T 14-10-2018 MC28_0954 ce4429f2506c2f201fd94fcab259e42a 321 SUPERFAMILY SSF103481 215 302 3.01E-9 T 14-10-2018 MC28_0954 ce4429f2506c2f201fd94fcab259e42a 321 Pfam PF00892 EamA-like transporter family 7 148 2.9E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0954 ce4429f2506c2f201fd94fcab259e42a 321 Pfam PF00892 EamA-like transporter family 161 300 3.7E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 Gene3D G3DSA:3.40.47.10 255 400 1.0E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 SMART SM00825 Beta-ketoacyl synthase 8 406 2.1E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 SUPERFAMILY SSF53901 6 248 6.16E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 421 657 5.1E-25 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 241 6.5E-39 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 249 362 8.3E-35 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 665 775 8.9E-17 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 SUPERFAMILY SSF53901 421 660 5.28E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 SUPERFAMILY SSF53901 628 816 2.1E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 Gene3D G3DSA:3.40.47.10 677 817 2.3E-24 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 Gene3D G3DSA:3.40.47.10 1 249 3.9E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 Gene3D G3DSA:3.40.47.10 406 665 1.8E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_F190 cdcaf0b9b34d399b2d59e4d1751e6ecc 818 SUPERFAMILY SSF53901 220 404 3.32E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 Pfam PF01595 Domain of unknown function DUF21 10 203 2.0E-47 T 14-10-2018 IPR002550 CNNM, transmembrane domain MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 SUPERFAMILY SSF56176 351 431 2.62E-11 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 SMART SM01091 354 433 6.9E-9 T 14-10-2018 IPR005170 Transporter-associated domain MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 SMART SM00116 290 338 0.69 T 14-10-2018 IPR000644 CBS domain MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 SMART SM00116 227 277 15.0 T 14-10-2018 IPR000644 CBS domain MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 Gene3D G3DSA:3.10.580.10 197 347 3.7E-48 T 14-10-2018 MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 Pfam PF00571 CBS domain 219 272 0.0041 T 14-10-2018 IPR000644 CBS domain MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 Pfam PF00571 CBS domain 289 338 1.1E-7 T 14-10-2018 IPR000644 CBS domain MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 Gene3D G3DSA:3.30.465.10 348 430 3.5E-10 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 SUPERFAMILY SSF54631 207 348 1.06E-28 T 14-10-2018 MC28_4035 1161506a5ed3d9e245138cefc9d20c74 439 Pfam PF03471 Transporter associated domain 356 431 2.1E-11 T 14-10-2018 IPR005170 Transporter-associated domain MC28_D068 185bddd031657e0e53a1e78536f75225 393 Pfam PF11799 impB/mucB/samB family C-terminal domain 225 335 1.8E-17 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_D068 185bddd031657e0e53a1e78536f75225 393 Pfam PF11798 IMS family HHH motif 153 185 1.7E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 MC28_D068 185bddd031657e0e53a1e78536f75225 393 Gene3D G3DSA:1.10.150.20 165 217 3.2E-15 T 14-10-2018 MC28_D068 185bddd031657e0e53a1e78536f75225 393 Gene3D G3DSA:3.30.1490.100 231 338 1.7E-10 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_D068 185bddd031657e0e53a1e78536f75225 393 Gene3D G3DSA:3.30.70.270 55 141 6.1E-24 T 14-10-2018 MC28_D068 185bddd031657e0e53a1e78536f75225 393 Pfam PF00817 impB/mucB/samB family 6 137 4.1E-25 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_D068 185bddd031657e0e53a1e78536f75225 393 SUPERFAMILY SSF56672 6 221 1.45E-48 T 14-10-2018 MC28_D068 185bddd031657e0e53a1e78536f75225 393 Gene3D G3DSA:2.30.40.20 8 54 6.1E-24 T 14-10-2018 MC28_D068 185bddd031657e0e53a1e78536f75225 393 SUPERFAMILY SSF100879 232 329 2.94E-11 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_1669 7f99157f84011b7d8fbb04c3762dca43 427 Pfam PF02378 Phosphotransferase system, EIIC 29 344 3.4E-55 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_1669 7f99157f84011b7d8fbb04c3762dca43 427 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 419 4.6E-119 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 MC28_1669 7f99157f84011b7d8fbb04c3762dca43 427 PIRSF PIRSF006351 1 425 1.5E-147 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 MC28_4754 ec4db9a647fecd0a59b1a894a79c378d 255 SUPERFAMILY SSF51556 1 254 2.76E-98 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_4754 ec4db9a647fecd0a59b1a894a79c378d 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 MC28_4754 ec4db9a647fecd0a59b1a894a79c378d 255 Pfam PF01026 TatD related DNase 3 252 1.3E-88 T 14-10-2018 IPR001130 TatD family GO:0016788 MC28_4754 ec4db9a647fecd0a59b1a894a79c378d 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 MC28_4754 ec4db9a647fecd0a59b1a894a79c378d 255 PIRSF PIRSF005902 1 255 1.5E-92 T 14-10-2018 IPR001130 TatD family GO:0016788 MC28_4754 ec4db9a647fecd0a59b1a894a79c378d 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 3.8E-101 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 MC28_4754 ec4db9a647fecd0a59b1a894a79c378d 255 Gene3D G3DSA:3.20.20.140 1 255 4.5E-113 T 14-10-2018 MC28_0506 a8321bc781bb27d40a66c44dd4add169 170 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 86 97 5.4E-7 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 MC28_0506 a8321bc781bb27d40a66c44dd4add169 170 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 28 43 5.4E-7 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 MC28_0506 a8321bc781bb27d40a66c44dd4add169 170 Pfam PF00717 Peptidase S24-like 28 85 5.2E-11 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C MC28_0506 a8321bc781bb27d40a66c44dd4add169 170 Gene3D G3DSA:2.10.109.10 26 79 1.2E-5 T 14-10-2018 MC28_0506 a8321bc781bb27d40a66c44dd4add169 170 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 1 148 9.4E-53 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 MC28_0506 a8321bc781bb27d40a66c44dd4add169 170 SUPERFAMILY SSF51306 22 99 1.88E-10 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily MC28_2551 4d5d21d108fad9d532d427f29bca40d9 353 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 4.0E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 MC28_2551 4d5d21d108fad9d532d427f29bca40d9 353 SUPERFAMILY SSF55347 131 278 2.03E-17 T 14-10-2018 MC28_2551 4d5d21d108fad9d532d427f29bca40d9 353 Gene3D G3DSA:3.30.360.10 123 353 9.7E-69 T 14-10-2018 MC28_2551 4d5d21d108fad9d532d427f29bca40d9 353 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 219 4.6E-6 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 MC28_2551 4d5d21d108fad9d532d427f29bca40d9 353 Gene3D G3DSA:1.10.3270.10 1 47 3.9E-11 T 14-10-2018 IPR023282 Hydroxymethylglutaryl-CoA reductase, N-terminal GO:0004420 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 MC28_2551 4d5d21d108fad9d532d427f29bca40d9 353 Gene3D G3DSA:1.10.3270.10 48 122 1.3E-24 T 14-10-2018 IPR023282 Hydroxymethylglutaryl-CoA reductase, N-terminal GO:0004420 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 MC28_2551 4d5d21d108fad9d532d427f29bca40d9 353 SUPERFAMILY SSF51735 3 158 3.71E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0595 fc4ebbd0a88f385a82d4516f35f01811 300 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0595 fc4ebbd0a88f385a82d4516f35f01811 300 Pfam PF00005 ABC transporter 22 163 6.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0595 fc4ebbd0a88f385a82d4516f35f01811 300 SMART SM00382 30 212 1.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0595 fc4ebbd0a88f385a82d4516f35f01811 300 Gene3D G3DSA:3.40.50.300 3 242 9.4E-63 T 14-10-2018 MC28_0595 fc4ebbd0a88f385a82d4516f35f01811 300 SUPERFAMILY SSF52540 2 234 5.53E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3601 b707160f319f073c45364a5fd2d34649 450 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 MC28_3601 b707160f319f073c45364a5fd2d34649 450 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 3.4E-26 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 MC28_3601 b707160f319f073c45364a5fd2d34649 450 SMART SM00729 143 361 6.9E-59 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_3601 b707160f319f073c45364a5fd2d34649 450 SUPERFAMILY SSF102114 119 365 5.89E-57 T 14-10-2018 MC28_3601 b707160f319f073c45364a5fd2d34649 450 Pfam PF04055 Radical SAM superfamily 149 319 3.3E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_3601 b707160f319f073c45364a5fd2d34649 450 Gene3D G3DSA:3.40.50.12160 3 134 2.1E-25 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily MC28_3601 b707160f319f073c45364a5fd2d34649 450 Pfam PF01938 TRAM domain 391 427 2.3E-6 T 14-10-2018 IPR002792 TRAM domain MC28_3601 b707160f319f073c45364a5fd2d34649 450 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 423 2.2E-140 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 MC28_3601 b707160f319f073c45364a5fd2d34649 450 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 429 1.1E-148 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 MC28_3601 b707160f319f073c45364a5fd2d34649 450 Gene3D G3DSA:3.80.30.20 140 375 4.2E-85 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe MC28_4439 e4aa79fd446330f2d4f40360e5ef8930 393 PIRSF PIRSF004810 2 393 8.9E-130 T 14-10-2018 IPR014047 Chromate transporter, long chain MC28_4439 e4aa79fd446330f2d4f40360e5ef8930 393 TIGRFAM TIGR00937 2A51: chromate efflux transporter 19 387 1.7E-136 T 14-10-2018 IPR014047 Chromate transporter, long chain MC28_4439 e4aa79fd446330f2d4f40360e5ef8930 393 Pfam PF02417 Chromate transporter 225 386 1.2E-41 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 MC28_4439 e4aa79fd446330f2d4f40360e5ef8930 393 Pfam PF02417 Chromate transporter 13 177 1.3E-35 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 MC28_5355 3677cfd55908c39291ba6bba30de81da 236 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 4 235 9.8E-106 T 14-10-2018 IPR012770 Trehalose operon transcriptional repressor MC28_5355 3677cfd55908c39291ba6bba30de81da 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_5355 3677cfd55908c39291ba6bba30de81da 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_5355 3677cfd55908c39291ba6bba30de81da 236 SUPERFAMILY SSF46785 2 71 9.52E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5355 3677cfd55908c39291ba6bba30de81da 236 Pfam PF07702 UTRA domain 90 227 9.5E-37 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_5355 3677cfd55908c39291ba6bba30de81da 236 Gene3D G3DSA:1.10.10.10 1 67 9.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5355 3677cfd55908c39291ba6bba30de81da 236 SUPERFAMILY SSF64288 55 235 1.73E-43 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_5355 3677cfd55908c39291ba6bba30de81da 236 SMART SM00866 89 228 4.9E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_5355 3677cfd55908c39291ba6bba30de81da 236 Gene3D G3DSA:3.40.1410.10 74 231 7.4E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_5355 3677cfd55908c39291ba6bba30de81da 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 67 1.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_5355 3677cfd55908c39291ba6bba30de81da 236 SMART SM00345 8 67 7.0E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3104 e81f9500142ee1062db8d883cc4a18dc 84 Pfam PF10852 Protein of unknown function (DUF2651) 6 78 5.7E-28 T 14-10-2018 IPR020258 Uncharacterised protein family YbeF MC28_3104 e81f9500142ee1062db8d883cc4a18dc 84 ProDom PD060054 MEMBRANE SPANNING TRANSMEMBRANE YBEF 1 81 1.0E-35 T 14-10-2018 IPR020258 Uncharacterised protein family YbeF MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 3.3E-42 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 3.7E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 3.7E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 3.7E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 3.7E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 3.7E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 3.7E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 3.7E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 Gene3D G3DSA:3.40.50.10860 8 276 1.9E-114 T 14-10-2018 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 SUPERFAMILY SSF51735 122 279 3.18E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 39.898 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 8.0E-72 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 Gene3D G3DSA:3.40.50.720 6 258 1.9E-114 T 14-10-2018 MC28_3473 2e03cf46d40906b0ac30cde2b810f6b9 286 SUPERFAMILY SSF53223 1 121 1.06E-40 T 14-10-2018 MC28_1349 602ebe83a04ca371e48d8150b0629f9b 77 SUPERFAMILY SSF54285 1 77 8.97E-18 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MC28_1349 602ebe83a04ca371e48d8150b0629f9b 77 Pfam PF02597 ThiS family 4 77 5.1E-16 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 MC28_1349 602ebe83a04ca371e48d8150b0629f9b 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 77 1.1E-21 T 14-10-2018 MC28_1349 602ebe83a04ca371e48d8150b0629f9b 77 Gene3D G3DSA:3.10.20.30 1 77 1.6E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_0179 1d493929d0d321dd97fab202efdc118c 225 PIRSF PIRSF006171 1 224 6.5E-78 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 MC28_0179 1d493929d0d321dd97fab202efdc118c 225 Gene3D G3DSA:3.40.50.12740 2 205 5.9E-28 T 14-10-2018 MC28_0179 1d493929d0d321dd97fab202efdc118c 225 SUPERFAMILY SSF52172 1 142 5.27E-27 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0179 1d493929d0d321dd97fab202efdc118c 225 SMART SM00448 2 115 3.5E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0179 1d493929d0d321dd97fab202efdc118c 225 Pfam PF00072 Response regulator receiver domain 4 115 1.6E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G162 d7f860cfe06203e3093cf2fa34157b01 231 Gene3D G3DSA:1.10.10.10 139 230 4.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G162 d7f860cfe06203e3093cf2fa34157b01 231 SMART SM00862 154 227 2.9E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G162 d7f860cfe06203e3093cf2fa34157b01 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 3.8E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G162 d7f860cfe06203e3093cf2fa34157b01 231 SMART SM00448 3 113 5.2E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G162 d7f860cfe06203e3093cf2fa34157b01 231 Pfam PF00072 Response regulator receiver domain 5 112 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G162 d7f860cfe06203e3093cf2fa34157b01 231 SUPERFAMILY SSF52172 3 180 6.01E-40 T 14-10-2018 IPR011006 CheY-like superfamily MC28_G162 d7f860cfe06203e3093cf2fa34157b01 231 Gene3D G3DSA:3.40.50.2300 1 138 2.5E-37 T 14-10-2018 MC28_5385 257930cd6693f2364d163fb925397b94 152 Gene3D G3DSA:1.10.10.10 5 146 6.2E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5385 257930cd6693f2364d163fb925397b94 152 Pfam PF01047 MarR family 35 93 6.6E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5385 257930cd6693f2364d163fb925397b94 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 9.7E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5385 257930cd6693f2364d163fb925397b94 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 9.7E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5385 257930cd6693f2364d163fb925397b94 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 9.7E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5385 257930cd6693f2364d163fb925397b94 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 9.7E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5385 257930cd6693f2364d163fb925397b94 152 SMART SM00347 28 128 2.6E-28 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5385 257930cd6693f2364d163fb925397b94 152 SUPERFAMILY SSF46785 3 143 1.05E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 201 1.5E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 SMART SM00387 249 357 8.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 251 346 9.6E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 SMART SM00388 136 203 1.3E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 SUPERFAMILY SSF55874 207 356 2.26E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 Gene3D G3DSA:1.10.287.130 76 199 2.2E-24 T 14-10-2018 MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 338 1.2E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 314 1.2E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 Gene3D G3DSA:3.30.565.10 205 358 4.8E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 SUPERFAMILY SSF47384 119 200 1.16E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_G139 d003ee8c6285d5dd0e3d0ed0d760d040 358 SUPERFAMILY SSF158472 83 127 2.35E-6 T 14-10-2018 MC28_1342 82446527b1dd7ecc5afbe0128b1062de 177 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 14 165 1.9E-40 T 14-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 MC28_1342 82446527b1dd7ecc5afbe0128b1062de 177 Gene3D G3DSA:1.20.120.700 14 162 3.7E-12 T 14-10-2018 MC28_1342 82446527b1dd7ecc5afbe0128b1062de 177 SUPERFAMILY SSF89155 10 169 2.75E-22 T 14-10-2018 IPR036411 TorD-like superfamily MC28_1342 82446527b1dd7ecc5afbe0128b1062de 177 Gene3D G3DSA:1.10.4070.10 70 154 3.7E-12 T 14-10-2018 MC28_1342 82446527b1dd7ecc5afbe0128b1062de 177 Pfam PF02613 Nitrate reductase delta subunit 44 151 2.4E-7 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 3.6E-44 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 SUPERFAMILY SSF69075 317 420 4.18E-17 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 420 28.917 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 Gene3D G3DSA:3.30.460.30 1 158 4.1E-52 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.0E-44 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 PIRSF PIRSF000445 1 434 2.9E-149 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 420 6.2E-146 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 SUPERFAMILY SSF69742 2 158 6.15E-45 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 Gene3D G3DSA:3.40.50.720 161 313 2.1E-43 T 14-10-2018 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 321 419 8.6E-20 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 MC28_3758 6836afe9d78ecdb19b5ea2266a569677 444 SUPERFAMILY SSF51735 163 314 1.08E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4619 b7cc03712e90053920cc9a2cd695cf42 281 SUPERFAMILY SSF55681 7 266 5.88E-68 T 14-10-2018 MC28_4619 b7cc03712e90053920cc9a2cd695cf42 281 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 6 278 51.145 T 14-10-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 MC28_4619 b7cc03712e90053920cc9a2cd695cf42 281 Gene3D G3DSA:3.30.930.10 5 280 7.1E-78 T 14-10-2018 MC28_4619 b7cc03712e90053920cc9a2cd695cf42 281 Pfam PF03099 Biotin/lipoate A/B protein ligase family 75 182 7.7E-13 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 7.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 7.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 Gene3D G3DSA:3.40.50.2300 63 304 1.8E-62 T 14-10-2018 MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 SMART SM00354 3 73 7.0E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 SUPERFAMILY SSF47413 2 61 1.97E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 Gene3D G3DSA:3.40.50.2300 160 287 1.8E-62 T 14-10-2018 MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 SUPERFAMILY SSF53822 63 327 3.53E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 6.2E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 Gene3D G3DSA:1.10.260.40 3 61 9.9E-21 T 14-10-2018 MC28_3505 dba44f710a9ec0ad13391226a1ba77be 327 Pfam PF13377 Periplasmic binding protein-like domain 169 327 7.1E-30 T 14-10-2018 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 438 9.1E-158 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 Gene3D G3DSA:1.20.1740.10 59 382 1.0E-6 T 14-10-2018 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 Pfam PF01235 Sodium:alanine symporter family 55 448 1.0E-148 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 PRINTS PR00175 Sodium/alanine symporter signature 211 230 2.1E-54 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 PRINTS PR00175 Sodium/alanine symporter signature 183 201 2.1E-54 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 PRINTS PR00175 Sodium/alanine symporter signature 92 114 2.1E-54 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 PRINTS PR00175 Sodium/alanine symporter signature 306 324 2.1E-54 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 PRINTS PR00175 Sodium/alanine symporter signature 409 429 2.1E-54 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 PRINTS PR00175 Sodium/alanine symporter signature 350 372 2.1E-54 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_1587 94ccdd469781de6524d42ea04d1c3456 455 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 Gene3D G3DSA:1.10.150.380 297 410 9.3E-37 T 14-10-2018 MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 SMART SM00845 325 472 1.5E-76 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 Pfam PF02934 GatB/GatE catalytic domain 6 285 1.7E-111 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 SUPERFAMILY SSF55931 4 293 2.03E-121 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 473 38.997 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 Gene3D G3DSA:1.10.10.410 412 475 6.1E-26 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 SUPERFAMILY SSF89095 294 400 2.09E-35 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 472 3.4E-181 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 MC28_5036 a41fe2a4d5e60fd97589464ac9bfd1f2 475 Pfam PF02637 GatB domain 325 472 1.3E-55 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 Gene3D G3DSA:3.30.70.270 477 653 7.7E-60 T 14-10-2018 MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 476 638 1.6E-40 T 14-10-2018 IPR000160 GGDEF domain MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 SMART SM00091 356 422 1.0E-7 T 14-10-2018 IPR000014 PAS domain MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 Gene3D G3DSA:3.20.20.450 654 904 6.1E-92 T 14-10-2018 IPR035919 EAL domain superfamily MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 355 474 1.4E-17 T 14-10-2018 IPR000014 PAS domain MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 Gene3D G3DSA:3.30.450.20 353 476 8.7E-22 T 14-10-2018 MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 SUPERFAMILY SSF55785 344 466 1.53E-22 T 14-10-2018 IPR035965 PAS domain superfamily MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 Pfam PF00563 EAL domain 657 891 9.2E-68 T 14-10-2018 IPR001633 EAL domain MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 SUPERFAMILY SSF55073 484 642 4.71E-47 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 SMART SM00086 427 468 0.0014 T 14-10-2018 IPR001610 PAC motif MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 SMART SM00052 650 896 2.7E-107 T 14-10-2018 IPR001633 EAL domain MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 SUPERFAMILY SSF141868 655 904 1.57E-83 T 14-10-2018 IPR035919 EAL domain superfamily MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 Pfam PF13426 PAS domain 366 467 3.1E-12 T 14-10-2018 IPR000014 PAS domain MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 636 3.4E-48 T 14-10-2018 IPR000160 GGDEF domain MC28_4538 c983c4a34a5bc7f0257a14210ae15d15 909 SMART SM00267 468 640 2.1E-61 T 14-10-2018 IPR000160 GGDEF domain MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 SUPERFAMILY SSF51055 411 453 3.27E-6 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 Gene3D G3DSA:2.70.50.50 41 210 5.7E-67 T 14-10-2018 MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 SUPERFAMILY SSF49265 219 403 5.41E-25 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 Pfam PF00041 Fibronectin type III domain 316 391 8.4E-6 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 Pfam PF00041 Fibronectin type III domain 221 297 1.1E-5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 Gene3D G3DSA:2.60.40.10 217 304 1.2E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 Gene3D G3DSA:2.60.40.10 312 402 7.1E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 SMART SM00060 314 391 4.6E-7 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 SMART SM00060 220 294 4.3E-8 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 Gene3D G3DSA:2.10.10.20 409 455 2.3E-8 T 14-10-2018 MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 SUPERFAMILY SSF81296 41 210 2.8E-56 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_1720 1448770e0dd08274f5cbf4a6c2457a58 458 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 41 207 9.9E-38 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal MC28_1762 965cf1869cd5fba3b94de7c6ed195570 267 SUPERFAMILY SSF63817 15 225 9.68E-46 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_1762 965cf1869cd5fba3b94de7c6ed195570 267 Gene3D G3DSA:2.40.260.10 32 241 1.2E-66 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_1762 965cf1869cd5fba3b94de7c6ed195570 267 Pfam PF04203 Sortase family 99 224 6.3E-25 T 14-10-2018 IPR005754 Sortase family MC28_1762 965cf1869cd5fba3b94de7c6ed195570 267 TIGRFAM TIGR01076 sortase_fam: sortase 97 231 5.2E-51 T 14-10-2018 IPR005754 Sortase family MC28_0397 2f58ed7e4c6c2961c7f7a72fb9b70e43 263 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 63 254 3.2E-50 T 14-10-2018 IPR018728 Domain of unknown function DUF2268 MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 7 247 4.8E-94 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 Gene3D G3DSA:3.40.50.720 1 246 4.5E-88 T 14-10-2018 MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 Pfam PF00106 short chain dehydrogenase 7 200 8.7E-69 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 1.1E-4 T 14-10-2018 MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 SUPERFAMILY SSF51735 5 247 2.57E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 9.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 9.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 9.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 9.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 9.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0545 b2a1f97c35092c26bafccb3e53ec31b9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4701 cd007b129f5a2854a809f75aae2c3e57 148 Gene3D G3DSA:3.10.430.100 60 148 4.6E-32 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily MC28_4701 cd007b129f5a2854a809f75aae2c3e57 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4701 cd007b129f5a2854a809f75aae2c3e57 148 Gene3D G3DSA:3.40.5.10 1 52 7.8E-25 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4701 cd007b129f5a2854a809f75aae2c3e57 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 5.8E-30 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal MC28_4701 cd007b129f5a2854a809f75aae2c3e57 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 9.4E-22 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4701 cd007b129f5a2854a809f75aae2c3e57 148 SUPERFAMILY SSF55653 57 147 5.1E-28 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily MC28_4701 cd007b129f5a2854a809f75aae2c3e57 148 SUPERFAMILY SSF55658 1 56 6.98E-18 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal MC28_4701 cd007b129f5a2854a809f75aae2c3e57 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 6.2E-50 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4701 cd007b129f5a2854a809f75aae2c3e57 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 26.086 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4902 1661d872fc93dbf4ef161fa96bcf92b0 315 Pfam PF12727 PBP superfamily domain 106 287 2.4E-53 T 14-10-2018 IPR024370 PBP domain MC28_4902 1661d872fc93dbf4ef161fa96bcf92b0 315 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 15 62 1.8E-19 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 MC28_4902 1661d872fc93dbf4ef161fa96bcf92b0 315 Pfam PF12728 Helix-turn-helix domain 15 62 1.2E-15 T 14-10-2018 MC28_4902 1661d872fc93dbf4ef161fa96bcf92b0 315 SUPERFAMILY SSF53850 143 302 9.66E-19 T 14-10-2018 MC28_4902 1661d872fc93dbf4ef161fa96bcf92b0 315 Gene3D G3DSA:3.40.190.10 168 269 5.8E-7 T 14-10-2018 MC28_4902 1661d872fc93dbf4ef161fa96bcf92b0 315 Gene3D G3DSA:1.10.1660.10 12 64 5.6E-11 T 14-10-2018 MC28_4902 1661d872fc93dbf4ef161fa96bcf92b0 315 SUPERFAMILY SSF46955 15 62 2.93E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_1066 7477b691fcae1c4b00cabc79f6aadc0c 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 1.1E-62 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 MC28_1066 7477b691fcae1c4b00cabc79f6aadc0c 393 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 392 2.5E-139 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 MC28_1066 7477b691fcae1c4b00cabc79f6aadc0c 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.1E-23 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 MC28_3029 3faeae7b1b1cdee494f36be843044977 399 SUPERFAMILY SSF63411 214 387 6.57E-46 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MC28_3029 3faeae7b1b1cdee494f36be843044977 399 Gene3D G3DSA:3.30.830.10 204 398 5.4E-56 T 14-10-2018 MC28_3029 3faeae7b1b1cdee494f36be843044977 399 Gene3D G3DSA:3.30.830.10 1 201 1.3E-77 T 14-10-2018 MC28_3029 3faeae7b1b1cdee494f36be843044977 399 Pfam PF05193 Peptidase M16 inactive domain 152 324 1.2E-41 T 14-10-2018 IPR007863 Peptidase M16, C-terminal MC28_3029 3faeae7b1b1cdee494f36be843044977 399 SUPERFAMILY SSF63411 3 196 2.55E-60 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MC28_3029 3faeae7b1b1cdee494f36be843044977 399 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 19 42 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 MC28_3029 3faeae7b1b1cdee494f36be843044977 399 Pfam PF00675 Insulinase (Peptidase family M16) 2 145 5.1E-50 T 14-10-2018 IPR011765 Peptidase M16, N-terminal MC28_0078 1f0fc88afac76a552f27c50170819f6a 313 Gene3D G3DSA:1.10.3720.10 46 244 6.9E-14 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0078 1f0fc88afac76a552f27c50170819f6a 313 SUPERFAMILY SSF161098 52 210 1.83E-13 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0078 1f0fc88afac76a552f27c50170819f6a 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 214 7.3E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_3330 190b8c00bf0a9c76a0dbf8ce42c693ac 212 SMART SM01007 9 195 4.4E-40 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal MC28_3330 190b8c00bf0a9c76a0dbf8ce42c693ac 212 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 203 101.594 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 MC28_3330 190b8c00bf0a9c76a0dbf8ce42c693ac 212 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 11 193 1.5E-39 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal MC28_3330 190b8c00bf0a9c76a0dbf8ce42c693ac 212 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 199 1.6E-63 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 MC28_3330 190b8c00bf0a9c76a0dbf8ce42c693ac 212 SUPERFAMILY SSF53639 5 201 1.08E-44 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily MC28_3330 190b8c00bf0a9c76a0dbf8ce42c693ac 212 Gene3D G3DSA:3.40.225.10 7 206 1.1E-49 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily MC28_3131 b78a8914db190aa567e73f8bc2363566 301 Gene3D G3DSA:3.30.43.10 1 88 3.8E-28 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 MC28_3131 b78a8914db190aa567e73f8bc2363566 301 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 301 90.851 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_3131 b78a8914db190aa567e73f8bc2363566 301 SUPERFAMILY SSF56176 21 210 3.35E-41 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_3131 b78a8914db190aa567e73f8bc2363566 301 SUPERFAMILY SSF56194 197 300 1.83E-37 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_3131 b78a8914db190aa567e73f8bc2363566 301 Pfam PF01565 FAD binding domain 35 164 3.2E-24 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 MC28_3131 b78a8914db190aa567e73f8bc2363566 301 Gene3D G3DSA:3.30.465.10 89 216 7.3E-45 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 MC28_3131 b78a8914db190aa567e73f8bc2363566 301 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 300 4.4E-99 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_3131 b78a8914db190aa567e73f8bc2363566 301 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 299 7.6E-29 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_3131 b78a8914db190aa567e73f8bc2363566 301 Gene3D G3DSA:3.90.78.10 217 301 3.4E-34 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4713 c782b50c6d6dd24eff88466dbafa8d2a 290 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 35 288 2.0E-114 T 14-10-2018 IPR023705 Nucleoid occlusion protein MC28_4713 c782b50c6d6dd24eff88466dbafa8d2a 290 Gene3D G3DSA:3.90.1530.30 50 113 5.7E-25 T 14-10-2018 MC28_4713 c782b50c6d6dd24eff88466dbafa8d2a 290 SUPERFAMILY SSF110849 36 173 8.89E-35 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily MC28_4713 c782b50c6d6dd24eff88466dbafa8d2a 290 SMART SM00470 37 127 6.7E-34 T 14-10-2018 IPR003115 ParB/Sulfiredoxin MC28_4713 c782b50c6d6dd24eff88466dbafa8d2a 290 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 212 1.4E-59 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 MC28_4713 c782b50c6d6dd24eff88466dbafa8d2a 290 Gene3D G3DSA:1.10.10.2830 114 228 3.0E-35 T 14-10-2018 MC28_4713 c782b50c6d6dd24eff88466dbafa8d2a 290 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 288 39.127 T 14-10-2018 IPR023705 Nucleoid occlusion protein MC28_4713 c782b50c6d6dd24eff88466dbafa8d2a 290 Pfam PF02195 ParB-like nuclease domain 38 126 1.1E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin MC28_0873 56520f137c8f46430176eaf47edf673e 277 Pfam PF01618 MotA/TolQ/ExbB proton channel family 121 237 9.5E-24 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel MC28_0873 56520f137c8f46430176eaf47edf673e 277 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site MC28_0775 9b1df04a7e49a471151326e189f47a08 127 PIRSF PIRSF006246 1 126 2.9E-56 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 MC28_0775 9b1df04a7e49a471151326e189f47a08 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 90 7.0E-44 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 MC28_0775 9b1df04a7e49a471151326e189f47a08 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 4.3E-58 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 MC28_0775 9b1df04a7e49a471151326e189f47a08 127 Gene3D G3DSA:2.40.40.20 1 123 2.2E-55 T 14-10-2018 MC28_0775 9b1df04a7e49a471151326e189f47a08 127 Pfam PF02261 Aspartate decarboxylase 1 114 1.3E-54 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 MC28_0775 9b1df04a7e49a471151326e189f47a08 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 75.027 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 MC28_0775 9b1df04a7e49a471151326e189f47a08 127 SUPERFAMILY SSF50692 1 120 5.38E-52 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily MC28_4110 a07eb5d28e44ac483bb5f5edd76ed766 140 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 136 8.4E-27 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase MC28_4110 a07eb5d28e44ac483bb5f5edd76ed766 140 SUPERFAMILY SSF55961 3 136 2.31E-37 T 14-10-2018 MC28_4110 a07eb5d28e44ac483bb5f5edd76ed766 140 Gene3D G3DSA:3.30.530.20 2 139 5.8E-47 T 14-10-2018 IPR023393 START-like domain superfamily MC28_E080 6e29918551b2fb9fb197dd817be206c6 119 Pfam PF14567 SMI1-KNR4 cell-wall 21 109 7.2E-21 T 14-10-2018 MC28_E080 6e29918551b2fb9fb197dd817be206c6 119 Gene3D G3DSA:3.40.1580.10 15 119 3.7E-20 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily MC28_E080 6e29918551b2fb9fb197dd817be206c6 119 SUPERFAMILY SSF160631 21 117 1.57E-18 T 14-10-2018 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 PRINTS PR00046 Major sigma-70 factor signature 80 93 7.9E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 PRINTS PR00046 Major sigma-70 factor signature 199 214 7.9E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 PRINTS PR00046 Major sigma-70 factor signature 214 225 7.9E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 PRINTS PR00046 Major sigma-70 factor signature 178 190 7.9E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 199 225 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 80 93 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 6 229 1.1E-112 T 14-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 Gene3D G3DSA:1.20.120.1810 22 124 4.2E-24 T 14-10-2018 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 Pfam PF04545 Sigma-70, region 4 175 225 3.0E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 225 1.7E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 SUPERFAMILY SSF88659 141 226 2.24E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 PIRSF PIRSF000770 4 240 2.5E-92 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 SUPERFAMILY SSF88946 12 121 8.5E-34 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 Pfam PF04542 Sigma-70 region 2 56 123 2.0E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3631 3d8b08c8bc88b5cce25a7af75783d785 240 Gene3D G3DSA:1.10.10.10 162 238 1.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4552 e3d73988e69132ddb832a4dfa30694ac 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 4.9E-93 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 MC28_4552 e3d73988e69132ddb832a4dfa30694ac 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.174 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 MC28_4552 e3d73988e69132ddb832a4dfa30694ac 209 SUPERFAMILY SSF53271 4 207 9.83E-73 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_4552 e3d73988e69132ddb832a4dfa30694ac 209 Gene3D G3DSA:3.40.50.2020 1 209 5.2E-83 T 14-10-2018 MC28_4552 e3d73988e69132ddb832a4dfa30694ac 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 2.2E-75 T 14-10-2018 MC28_5061 9008c375e79b57870778b14c46910c78 400 Gene3D G3DSA:3.90.1200.10 109 396 2.9E-99 T 14-10-2018 MC28_5061 9008c375e79b57870778b14c46910c78 400 PIRSF PIRSF031134 1 396 2.0E-160 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 MC28_5061 9008c375e79b57870778b14c46910c78 400 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 400 170.559 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 MC28_5061 9008c375e79b57870778b14c46910c78 400 Gene3D G3DSA:3.30.200.20 1 108 2.0E-35 T 14-10-2018 MC28_5061 9008c375e79b57870778b14c46910c78 400 Pfam PF01636 Phosphotransferase enzyme family 25 260 1.4E-12 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_5061 9008c375e79b57870778b14c46910c78 400 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 26 391 9.0E-100 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 MC28_5061 9008c375e79b57870778b14c46910c78 400 SUPERFAMILY SSF56112 3 393 3.47E-83 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 SUPERFAMILY SSF54909 67 137 5.36E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.8E-18 T 14-10-2018 MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 Gene3D G3DSA:3.30.70.920 51 140 6.8E-21 T 14-10-2018 MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 Gene3D G3DSA:1.10.10.10 1 50 1.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 Pfam PF01037 Lrp/AsnC ligand binding domain 70 136 4.4E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 SMART SM00344 3 109 1.1E-37 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site MC28_0599 bfccaaebde5b0e88d62ca7393889b800 150 SUPERFAMILY SSF46785 2 62 7.55E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_G197 a14496b7194462b6f413af8fc6edf953 194 SUPERFAMILY SSF52833 32 193 2.78E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_G197 a14496b7194462b6f413af8fc6edf953 194 Gene3D G3DSA:3.40.30.10 25 193 2.0E-51 T 14-10-2018 MC28_G197 a14496b7194462b6f413af8fc6edf953 194 Pfam PF02630 SCO1/SenC 13 176 2.2E-37 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_0547 5e1aa65eccb4ff4bc5cb84b839c1782f 397 Gene3D G3DSA:3.30.9.10 122 343 2.5E-57 T 14-10-2018 MC28_0547 5e1aa65eccb4ff4bc5cb84b839c1782f 397 Pfam PF01266 FAD dependent oxidoreductase 29 380 1.1E-41 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MC28_0547 5e1aa65eccb4ff4bc5cb84b839c1782f 397 Gene3D G3DSA:3.50.50.60 31 383 2.5E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0547 5e1aa65eccb4ff4bc5cb84b839c1782f 397 SUPERFAMILY SSF51905 28 387 5.44E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3054 c6241b555efb0bef442512a9dfc01fec 302 Gene3D G3DSA:1.10.443.10 114 296 5.4E-63 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_3054 c6241b555efb0bef442512a9dfc01fec 302 Gene3D G3DSA:1.10.150.130 6 101 1.8E-26 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_3054 c6241b555efb0bef442512a9dfc01fec 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 12 302 3.3E-101 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 MC28_3054 c6241b555efb0bef442512a9dfc01fec 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 93 1.1E-23 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_3054 c6241b555efb0bef442512a9dfc01fec 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 302 57.412 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD MC28_3054 c6241b555efb0bef442512a9dfc01fec 302 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 12 302 8.9E-111 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 MC28_3054 c6241b555efb0bef442512a9dfc01fec 302 Pfam PF00589 Phage integrase family 115 288 4.5E-51 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_3054 c6241b555efb0bef442512a9dfc01fec 302 SUPERFAMILY SSF56349 6 296 2.83E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_2171 3b96ab167063e42f84b36f8cca07c86a 234 Gene3D G3DSA:3.30.460.10 6 120 1.1E-15 T 14-10-2018 MC28_2171 3b96ab167063e42f84b36f8cca07c86a 234 SUPERFAMILY SSF81301 5 114 2.77E-16 T 14-10-2018 MC28_2171 3b96ab167063e42f84b36f8cca07c86a 234 Pfam PF01909 Nucleotidyltransferase domain 18 88 4.0E-8 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 MC28_1445 89c31771c03eade8dd371d6369f09c3f 40 ProDom PD114754 YWBB 17 37 0.004 T 14-10-2018 IPR024250 Protein of unknown function DUF2711 MC28_0608 ab6c16c0357bea9b198d903394867cc0 504 Hamap MF_00593 D-alanine--D-alanyl carrier protein ligase [dltA]. 1 504 244.336 T 14-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 MC28_0608 ab6c16c0357bea9b198d903394867cc0 504 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 2 503 2.1E-214 T 14-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 MC28_0608 ab6c16c0357bea9b198d903394867cc0 504 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 28 428 3.4E-105 T 14-10-2018 IPR010071 Amino acid adenylation domain MC28_0608 ab6c16c0357bea9b198d903394867cc0 504 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 492 1.6E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_0608 ab6c16c0357bea9b198d903394867cc0 504 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_0608 ab6c16c0357bea9b198d903394867cc0 504 Gene3D G3DSA:3.40.50.12780 1 397 5.1E-153 T 14-10-2018 MC28_0608 ab6c16c0357bea9b198d903394867cc0 504 Pfam PF00501 AMP-binding enzyme 8 404 7.3E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_0608 ab6c16c0357bea9b198d903394867cc0 504 Gene3D G3DSA:3.30.300.30 398 504 3.4E-32 T 14-10-2018 MC28_0608 ab6c16c0357bea9b198d903394867cc0 504 SUPERFAMILY SSF56801 4 501 1.27E-125 T 14-10-2018 MC28_3708 9803c8d9bda36209c559130bb2edf847 86 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 5 84 2.6E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC MC28_3708 9803c8d9bda36209c559130bb2edf847 86 PRINTS PR01853 Bacterial YajC preprotein translocase signature 5 25 7.5E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC MC28_3708 9803c8d9bda36209c559130bb2edf847 86 PRINTS PR01853 Bacterial YajC preprotein translocase signature 43 61 7.5E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC MC28_3708 9803c8d9bda36209c559130bb2edf847 86 SMART SM01323 3 84 1.9E-40 T 14-10-2018 IPR003849 Preprotein translocase YajC MC28_3708 9803c8d9bda36209c559130bb2edf847 86 Pfam PF02699 Preprotein translocase subunit 7 81 1.4E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC MC28_1752 8c05219c216d4d5d87e9878049b1ebe7 231 SMART SM00448 3 113 2.3E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1752 8c05219c216d4d5d87e9878049b1ebe7 231 SMART SM00862 153 229 8.9E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1752 8c05219c216d4d5d87e9878049b1ebe7 231 SUPERFAMILY SSF46894 129 229 1.67E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_1752 8c05219c216d4d5d87e9878049b1ebe7 231 Pfam PF00072 Response regulator receiver domain 5 114 2.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1752 8c05219c216d4d5d87e9878049b1ebe7 231 Gene3D G3DSA:3.40.50.2300 1 132 8.6E-37 T 14-10-2018 MC28_1752 8c05219c216d4d5d87e9878049b1ebe7 231 Gene3D G3DSA:1.10.10.10 134 231 1.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1752 8c05219c216d4d5d87e9878049b1ebe7 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 9.6E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1752 8c05219c216d4d5d87e9878049b1ebe7 231 SUPERFAMILY SSF52172 2 128 9.11E-41 T 14-10-2018 IPR011006 CheY-like superfamily MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 Gene3D G3DSA:3.30.70.260 345 414 1.5E-148 T 14-10-2018 MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 PIRSF PIRSF000098 2 427 5.9E-173 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 SUPERFAMILY SSF55021 349 415 2.89E-8 T 14-10-2018 MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 130 1.0E-21 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 SUPERFAMILY SSF55347 138 303 3.27E-53 T 14-10-2018 MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 Gene3D G3DSA:3.30.360.10 137 344 1.5E-148 T 14-10-2018 MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 Gene3D G3DSA:3.40.50.720 5 336 1.5E-148 T 14-10-2018 MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 SUPERFAMILY SSF51735 2 159 7.06E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1171 3f9c0026e4c71dbe14d40887f9fad319 431 Pfam PF00742 Homoserine dehydrogenase 138 316 9.5E-65 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 MC28_0917 c947883ce3613d74eafd88bd3d0416b0 257 Pfam PF00460 Flagella basal body rod protein 4 34 8.1E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MC28_0917 c947883ce3613d74eafd88bd3d0416b0 257 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 250 1.6E-11 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MC28_0917 c947883ce3613d74eafd88bd3d0416b0 257 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 134 1.4E-23 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G MC28_0917 c947883ce3613d74eafd88bd3d0416b0 257 SUPERFAMILY SSF117143 100 190 9.15E-13 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like MC28_5386 3e3fbc36774afc517ccb52231070090d 537 Gene3D G3DSA:1.20.1250.20 254 427 7.8E-23 T 14-10-2018 MC28_5386 3e3fbc36774afc517ccb52231070090d 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 4.3E-11 T 14-10-2018 MC28_5386 3e3fbc36774afc517ccb52231070090d 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 300 324 4.3E-11 T 14-10-2018 MC28_5386 3e3fbc36774afc517ccb52231070090d 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.3E-11 T 14-10-2018 MC28_5386 3e3fbc36774afc517ccb52231070090d 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.3E-11 T 14-10-2018 MC28_5386 3e3fbc36774afc517ccb52231070090d 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 4.3E-11 T 14-10-2018 MC28_5386 3e3fbc36774afc517ccb52231070090d 537 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 12 509 5.9E-90 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 MC28_5386 3e3fbc36774afc517ccb52231070090d 537 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_5386 3e3fbc36774afc517ccb52231070090d 537 SUPERFAMILY SSF103473 2 524 1.31E-77 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_5386 3e3fbc36774afc517ccb52231070090d 537 Gene3D G3DSA:1.20.1720.10 12 197 3.3E-49 T 14-10-2018 MC28_5386 3e3fbc36774afc517ccb52231070090d 537 Pfam PF07690 Major Facilitator Superfamily 16 407 1.5E-54 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0302 6cbfa356a6a4afc80e67169f814403ba 348 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 341 9.9E-124 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 MC28_0302 6cbfa356a6a4afc80e67169f814403ba 348 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 MC28_0302 6cbfa356a6a4afc80e67169f814403ba 348 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 MC28_0302 6cbfa356a6a4afc80e67169f814403ba 348 SUPERFAMILY SSF51726 4 344 8.76E-104 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 MC28_0302 6cbfa356a6a4afc80e67169f814403ba 348 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 8 340 2.6E-125 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 MC28_0302 6cbfa356a6a4afc80e67169f814403ba 348 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 342 47.045 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 MC28_0302 6cbfa356a6a4afc80e67169f814403ba 348 Gene3D G3DSA:3.20.20.210 2 347 5.0E-143 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 MC28_1271 4c959b394d535339a3123834d6949204 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 1.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1271 4c959b394d535339a3123834d6949204 195 SUPERFAMILY SSF46689 8 69 1.28E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1271 4c959b394d535339a3123834d6949204 195 Gene3D G3DSA:1.10.357.10 3 189 2.8E-21 T 14-10-2018 MC28_1271 4c959b394d535339a3123834d6949204 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 5.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1271 4c959b394d535339a3123834d6949204 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 5.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1271 4c959b394d535339a3123834d6949204 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 9.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 362 9.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 348 9.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 9.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 Gene3D G3DSA:3.30.565.10 256 402 2.4E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 SMART SM00387 296 402 1.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 Gene3D G3DSA:1.10.287.130 177 252 6.5E-12 T 14-10-2018 MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 Pfam PF00512 His Kinase A (phospho-acceptor) domain 194 250 2.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 SUPERFAMILY SSF55874 252 401 3.14E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 SUPERFAMILY SSF47384 185 251 2.55E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 SMART SM00388 191 254 1.2E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5074 4b13008be642053e4d9f372cb34d4cf2 402 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 400 1.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2796 4ef666b609b8f7d6fb5b463a7e23cf00 505 Gene3D G3DSA:1.20.200.10 196 501 3.5E-123 T 14-10-2018 MC28_2796 4ef666b609b8f7d6fb5b463a7e23cf00 505 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 2 493 2.0E-215 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2796 4ef666b609b8f7d6fb5b463a7e23cf00 505 Gene3D G3DSA:1.10.275.10 1 195 2.2E-68 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal MC28_2796 4ef666b609b8f7d6fb5b463a7e23cf00 505 Pfam PF00221 Aromatic amino acid lyase 9 466 2.7E-195 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 MC28_2796 4ef666b609b8f7d6fb5b463a7e23cf00 505 SUPERFAMILY SSF48557 1 494 1.1E-194 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 MC28_2796 4ef666b609b8f7d6fb5b463a7e23cf00 505 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 500 44.825 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2796 4ef666b609b8f7d6fb5b463a7e23cf00 505 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 137 153 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 1.4E-37 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 293 1.4E-37 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 1.4E-37 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 1.4E-37 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 171 185 1.4E-37 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 SMART SM01097 1 131 5.0E-89 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3110 fc654a5780b22fc286280c204feaa501 365 Gene3D G3DSA:3.40.50.880 146 356 1.2E-66 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 251 8.0E-12 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 213 222 8.0E-12 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 326 339 8.0E-12 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 355 48.962 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3110 fc654a5780b22fc286280c204feaa501 365 SUPERFAMILY SSF52021 1 144 1.31E-57 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3110 fc654a5780b22fc286280c204feaa501 365 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 129 3.0E-52 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3110 fc654a5780b22fc286280c204feaa501 365 SUPERFAMILY SSF52317 147 355 9.9E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00097 Anthranilate synthase component II signature 213 222 6.0E-7 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00097 Anthranilate synthase component II signature 326 339 6.0E-7 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 PRINTS PR00097 Anthranilate synthase component II signature 240 251 6.0E-7 T 14-10-2018 MC28_3110 fc654a5780b22fc286280c204feaa501 365 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 352 1.0E-147 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3110 fc654a5780b22fc286280c204feaa501 365 Gene3D G3DSA:3.50.30.20 1 145 4.1E-56 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3110 fc654a5780b22fc286280c204feaa501 365 Pfam PF00117 Glutamine amidotransferase class-I 173 349 7.3E-48 T 14-10-2018 IPR017926 Glutamine amidotransferase MC28_5276 f5873b9bee6302f6b7964a927edd6574 175 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 139 171 2.2E-5 T 14-10-2018 MC28_0818 11b15d769a7f6b859c472506228ddf90 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_0818 11b15d769a7f6b859c472506228ddf90 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.5E-85 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_0818 11b15d769a7f6b859c472506228ddf90 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.1E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_0818 11b15d769a7f6b859c472506228ddf90 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.1E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_0818 11b15d769a7f6b859c472506228ddf90 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.1E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_0818 11b15d769a7f6b859c472506228ddf90 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.1E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_0818 11b15d769a7f6b859c472506228ddf90 248 Gene3D G3DSA:3.90.230.10 1 248 3.0E-99 T 14-10-2018 MC28_0818 11b15d769a7f6b859c472506228ddf90 248 SUPERFAMILY SSF55920 1 247 3.4E-80 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like MC28_0818 11b15d769a7f6b859c472506228ddf90 248 Pfam PF00557 Metallopeptidase family M24 12 239 3.1E-50 T 14-10-2018 IPR000994 Peptidase M24 MC28_0818 11b15d769a7f6b859c472506228ddf90 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 37.323 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 SUPERFAMILY SSF51735 6 196 9.63E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 PIRSF PIRSF500136 1 414 3.8E-151 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 Gene3D G3DSA:3.40.50.720 205 414 1.5E-54 T 14-10-2018 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 6 406 1.1E-135 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 SUPERFAMILY SSF52413 312 409 7.19E-22 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 PIRSF PIRSF000124 5 411 1.1E-64 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 296 1.2E-24 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 Gene3D G3DSA:3.40.50.720 1 202 1.6E-56 T 14-10-2018 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 SUPERFAMILY SSF48179 205 297 5.27E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 187 1.3E-39 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 SMART SM00984 317 411 5.2E-33 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_5232 f12207c6391959632801b3bd8dc8f62a 414 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 410 3.1E-22 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 Gene3D G3DSA:3.40.50.1980 21 199 6.4E-61 T 14-10-2018 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 SUPERFAMILY SSF53807 12 310 1.77E-85 T 14-10-2018 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 Gene3D G3DSA:3.40.50.1980 200 312 2.2E-38 T 14-10-2018 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 310 4.6E-79 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 PRINTS PR00691 Adhesin B signature 141 160 2.9E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 PRINTS PR00691 Adhesin B signature 55 73 2.9E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 PRINTS PR00691 Adhesin B signature 197 214 2.9E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 PRINTS PR00691 Adhesin B signature 30 51 2.9E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 PRINTS PR00691 Adhesin B signature 290 308 2.9E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 PRINTS PR00690 Adhesin family signature 61 74 4.8E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 PRINTS PR00690 Adhesin family signature 74 91 4.8E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 PRINTS PR00690 Adhesin family signature 30 48 4.8E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 MC28_1245 00718bde6b59eea51cfbd408ece64553 312 PRINTS PR00690 Adhesin family signature 197 218 4.8E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 MC28_4614 6cebe2c874e9d0d532a92a66d46164c5 270 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4614 6cebe2c874e9d0d532a92a66d46164c5 270 Gene3D G3DSA:3.40.50.300 1 254 2.0E-68 T 14-10-2018 MC28_4614 6cebe2c874e9d0d532a92a66d46164c5 270 Pfam PF00005 ABC transporter 20 167 2.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4614 6cebe2c874e9d0d532a92a66d46164c5 270 SUPERFAMILY SSF52540 4 232 6.69E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4614 6cebe2c874e9d0d532a92a66d46164c5 270 SMART SM00382 28 217 2.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 SUPERFAMILY SSF52016 640 898 1.37E-87 T 14-10-2018 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 SUPERFAMILY SSF53732 4 636 1.57E-227 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 ProSitePatterns PS01244 Aconitase family signature 2. 502 515 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 Gene3D G3DSA:3.30.499.20 4 375 3.9E-158 T 14-10-2018 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 Pfam PF00330 Aconitase family (aconitate hydratase) 77 571 4.1E-176 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 Gene3D G3DSA:3.30.499.10 376 599 9.7E-102 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 Pfam PF00694 Aconitase C-terminal domain 701 828 2.6E-46 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 Gene3D G3DSA:1.10.1440.20 600 660 1.9E-23 T 14-10-2018 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 PRINTS PR00415 Aconitase family signature 219 234 6.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 PRINTS PR00415 Aconitase family signature 281 294 6.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 PRINTS PR00415 Aconitase family signature 440 451 6.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 PRINTS PR00415 Aconitase family signature 147 160 6.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 PRINTS PR00415 Aconitase family signature 502 515 6.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 PRINTS PR00415 Aconitase family signature 375 389 6.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 PRINTS PR00415 Aconitase family signature 171 179 6.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 PRINTS PR00415 Aconitase family signature 295 308 6.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 PRINTS PR00415 Aconitase family signature 205 218 6.7E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 Gene3D G3DSA:3.20.19.10 664 901 2.2E-103 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 ProSitePatterns PS00450 Aconitase family signature 1. 436 452 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 MC28_2762 55ad3188cba4bff55e67d80ef226d8bf 907 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 899 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Gene3D G3DSA:2.60.40.10 749 824 1.1E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Gene3D G3DSA:2.60.40.10 583 658 4.4E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Gene3D G3DSA:2.60.40.10 666 742 3.2E-31 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 94 133 1.4E-11 T 14-10-2018 IPR011096 FTP domain MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Gene3D G3DSA:3.10.170.10 247 405 5.2E-38 T 14-10-2018 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 392 408 3.3E-13 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 483 499 3.3E-13 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 413 424 3.3E-13 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 854 886 3.9E-5 T 14-10-2018 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Pfam PF00746 LPXTG cell wall anchor motif 853 887 1.3E-4 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 404 568 4.8E-49 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Gene3D G3DSA:3.10.450.490 52 144 4.9E-5 T 14-10-2018 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Gene3D G3DSA:1.10.390.10 406 568 1.2E-46 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Pfam PF16403 Domain of unknown function (DUF5011) 755 821 5.5E-14 T 14-10-2018 IPR032179 Domain of unknown function DUF5011 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Pfam PF16403 Domain of unknown function (DUF5011) 588 656 1.2E-14 T 14-10-2018 IPR032179 Domain of unknown function DUF5011 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Pfam PF16403 Domain of unknown function (DUF5011) 675 739 1.0E-16 T 14-10-2018 IPR032179 Domain of unknown function DUF5011 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 248 401 1.1E-33 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 MC28_1759 e23b3180f82133462fb71e4d8ce7d0e7 890 SUPERFAMILY SSF55486 247 568 1.83E-67 T 14-10-2018 MC28_2141 83ae18076dec2bece0147d6123828f1a 366 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 351 4.5E-102 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 MC28_2141 83ae18076dec2bece0147d6123828f1a 366 Pfam PF00155 Aminotransferase class I and II 31 347 8.0E-51 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_2141 83ae18076dec2bece0147d6123828f1a 366 Gene3D G3DSA:3.90.1150.10 8 344 1.6E-106 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2141 83ae18076dec2bece0147d6123828f1a 366 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 219 228 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 MC28_2141 83ae18076dec2bece0147d6123828f1a 366 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 353 57.764 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 MC28_2141 83ae18076dec2bece0147d6123828f1a 366 Gene3D G3DSA:3.40.640.10 43 267 1.6E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2141 83ae18076dec2bece0147d6123828f1a 366 SUPERFAMILY SSF53383 5 343 1.41E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3652 eb07bd84fd2690718d59f013b334ec36 194 Pfam PF07883 Cupin domain 115 182 1.4E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_3652 eb07bd84fd2690718d59f013b334ec36 194 SUPERFAMILY SSF51182 67 184 1.07E-21 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_3652 eb07bd84fd2690718d59f013b334ec36 194 SMART SM00530 19 74 5.0E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3652 eb07bd84fd2690718d59f013b334ec36 194 Pfam PF12844 Helix-turn-helix domain 17 75 3.8E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3652 eb07bd84fd2690718d59f013b334ec36 194 Gene3D G3DSA:1.10.260.40 6 77 1.5E-17 T 14-10-2018 MC28_3652 eb07bd84fd2690718d59f013b334ec36 194 SUPERFAMILY SSF47413 12 79 7.6E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3652 eb07bd84fd2690718d59f013b334ec36 194 Gene3D G3DSA:2.60.120.10 78 184 2.4E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_5383 351ae5805a8b14367af4e1ef7de2be3f 41 Pfam PF13219 Protein of unknown function (DUF4027) 4 39 1.5E-22 T 14-10-2018 IPR025104 Protein of unknown function DUF4027 MC28_0232 1fbe571d2f6cdccf5dfa603479975289 66 Pfam PF05532 CsbD-like 8 60 1.5E-14 T 14-10-2018 IPR008462 CsbD-like domain MC28_0232 1fbe571d2f6cdccf5dfa603479975289 66 SUPERFAMILY SSF69047 7 63 1.83E-11 T 14-10-2018 IPR036629 YjbJ superfamily MC28_0232 1fbe571d2f6cdccf5dfa603479975289 66 Gene3D G3DSA:1.10.1470.10 7 66 2.2E-7 T 14-10-2018 IPR036629 YjbJ superfamily MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 SUPERFAMILY SSF50249 50 114 3.31E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 Gene3D G3DSA:1.10.720.10 1 47 1.4E-20 T 14-10-2018 MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 SMART SM00382 168 353 1.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 SMART SM00357 54 119 1.2E-19 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 SUPERFAMILY SSF52540 91 369 3.32E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 223.235 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 SMART SM00959 7 49 1.0E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 Pfam PF07498 Rho termination factor, N-terminal domain 8 49 1.4E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 SUPERFAMILY SSF68912 4 49 5.89E-11 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 Gene3D G3DSA:2.40.50.140 48 124 1.0E-29 T 14-10-2018 MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 TIGRFAM TIGR00767 rho: transcription termination factor Rho 4 412 1.2E-204 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 158 361 2.5E-18 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 Pfam PF07497 Rho termination factor, RNA-binding domain 53 126 1.6E-31 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 MC28_4568 82ce8a6527cae82fa6ff43e578cefb98 423 Gene3D G3DSA:3.40.50.300 131 413 2.0E-122 T 14-10-2018 MC28_1308 8e28ff8bd8bb61365a6be3137e5e750d 399 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 26 382 2.8E-131 T 14-10-2018 IPR018778 Type VII secretion system EssB MC28_1308 8e28ff8bd8bb61365a6be3137e5e750d 399 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 7 382 2.0E-148 T 14-10-2018 IPR018778 Type VII secretion system EssB MC28_1308 8e28ff8bd8bb61365a6be3137e5e750d 399 Gene3D G3DSA:1.10.510.10 23 196 9.5E-60 T 14-10-2018 MC28_1308 8e28ff8bd8bb61365a6be3137e5e750d 399 Gene3D G3DSA:1.25.40.680 240 399 2.7E-50 T 14-10-2018 MC28_3688 eb72b78a0561ae384132c52e55d9f25d 381 Gene3D G3DSA:1.10.260.50 15 278 1.1E-143 T 14-10-2018 MC28_3688 eb72b78a0561ae384132c52e55d9f25d 381 SUPERFAMILY SSF53383 3 374 8.78E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3688 eb72b78a0561ae384132c52e55d9f25d 381 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MC28_3688 eb72b78a0561ae384132c52e55d9f25d 381 Gene3D G3DSA:3.90.1150.10 4 368 1.1E-143 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3688 eb72b78a0561ae384132c52e55d9f25d 381 Gene3D G3DSA:3.40.640.10 61 235 1.1E-143 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3688 eb72b78a0561ae384132c52e55d9f25d 381 Pfam PF00266 Aminotransferase class-V 4 366 2.0E-85 T 14-10-2018 IPR000192 Aminotransferase class V domain MC28_3688 eb72b78a0561ae384132c52e55d9f25d 381 PIRSF PIRSF005572 1 381 1.6E-123 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 MC28_0581 3a0c2519a4e27295b63c1efddadd3e53 119 Gene3D G3DSA:3.40.50.360 1 119 1.0E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0581 3a0c2519a4e27295b63c1efddadd3e53 119 SUPERFAMILY SSF52218 1 117 2.43E-25 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0581 3a0c2519a4e27295b63c1efddadd3e53 119 Pfam PF07972 NrdI Flavodoxin like 3 110 1.1E-31 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI MC28_0581 3a0c2519a4e27295b63c1efddadd3e53 119 PIRSF PIRSF005087 1 119 5.6E-41 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI MC28_0581 3a0c2519a4e27295b63c1efddadd3e53 119 Hamap MF_00128 Protein NrdI [nrdI]. 1 119 26.524 T 14-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial MC28_0581 3a0c2519a4e27295b63c1efddadd3e53 119 TIGRFAM TIGR00333 nrdI: nrdI protein 3 117 1.1E-39 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 Gene3D G3DSA:1.10.1750.10 346 445 1.5E-34 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 Pfam PF00308 Bacterial dnaA protein 111 327 3.0E-108 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 ProSitePatterns PS01008 DnaA protein signature. 405 424 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 Gene3D G3DSA:3.30.300.180 1 82 2.8E-31 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 SUPERFAMILY SSF48295 342 446 6.02E-36 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 SUPERFAMILY SSF52540 111 323 2.35E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 Pfam PF11638 DnaA N-terminal domain 6 66 2.6E-20 T 14-10-2018 IPR024633 DnaA N-terminal domain MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 358 424 2.4E-29 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 144 164 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 176 190 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 242 269 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 405 424 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 208 222 7.8E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 SMART SM00760 355 424 1.1E-39 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 SMART SM00382 143 271 2.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 443 2.6E-189 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 446 35.123 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 Gene3D G3DSA:3.40.50.300 94 275 7.7E-56 T 14-10-2018 MC28_4721 fe73131f6db4fdc3a9452940a5246d27 446 Gene3D G3DSA:1.10.8.60 277 345 3.2E-30 T 14-10-2018 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 SUPERFAMILY SSF52794 411 498 6.8E-7 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Gene3D G3DSA:3.40.930.10 504 644 6.0E-30 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 SUPERFAMILY SSF46785 3 66 8.16E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0066 23501b1f5ee446b165ac147c63fda658 646 SUPERFAMILY SSF63520 189 286 1.44E-14 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Gene3D G3DSA:1.10.10.10 1 157 8.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Gene3D G3DSA:3.40.50.2300 412 502 6.6E-9 T 14-10-2018 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 508 644 5.1E-30 T 14-10-2018 IPR002178 PTS EIIA type-2 domain MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Pfam PF08279 HTH domain 7 64 1.7E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Gene3D G3DSA:1.10.1790.10 190 290 7.2E-12 T 14-10-2018 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 SUPERFAMILY SSF63520 302 403 3.53E-23 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Gene3D G3DSA:1.10.1790.10 304 403 7.0E-21 T 14-10-2018 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Pfam PF05043 Mga helix-turn-helix domain 89 169 1.8E-10 T 14-10-2018 IPR007737 Mga helix-turn-helix domain MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Pfam PF00874 PRD domain 207 286 1.4E-13 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 Pfam PF00874 PRD domain 313 401 1.8E-20 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_0066 23501b1f5ee446b165ac147c63fda658 646 SUPERFAMILY SSF55804 505 645 1.83E-31 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 MC28_0649 bd0ea098461e1acc0d5923c18ad7d5ae 109 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 7 89 2.9E-33 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 MC28_0649 bd0ea098461e1acc0d5923c18ad7d5ae 109 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 11 94 3.0E-20 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 MC28_0649 bd0ea098461e1acc0d5923c18ad7d5ae 109 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 4 90 20.991 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 MC28_0649 bd0ea098461e1acc0d5923c18ad7d5ae 109 Gene3D G3DSA:1.10.287.1080 3 97 2.7E-33 T 14-10-2018 MC28_0649 bd0ea098461e1acc0d5923c18ad7d5ae 109 SUPERFAMILY SSF101386 7 95 8.67E-25 T 14-10-2018 MC28_4875 3a935dad659fbe6052a4af124807966f 267 Gene3D G3DSA:3.40.50.720 3 267 2.3E-64 T 14-10-2018 MC28_4875 3a935dad659fbe6052a4af124807966f 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 265 5.6E-43 T 14-10-2018 MC28_4875 3a935dad659fbe6052a4af124807966f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 105 116 2.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4875 3a935dad659fbe6052a4af124807966f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 2.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4875 3a935dad659fbe6052a4af124807966f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 197 2.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4875 3a935dad659fbe6052a4af124807966f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 5.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4875 3a935dad659fbe6052a4af124807966f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 5.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4875 3a935dad659fbe6052a4af124807966f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 197 5.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4875 3a935dad659fbe6052a4af124807966f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 216 5.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4875 3a935dad659fbe6052a4af124807966f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 168 5.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4875 3a935dad659fbe6052a4af124807966f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 105 116 5.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4875 3a935dad659fbe6052a4af124807966f 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 165 193 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_4875 3a935dad659fbe6052a4af124807966f 267 SUPERFAMILY SSF51735 15 265 2.47E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 Pfam PF00849 RNA pseudouridylate synthase 73 196 4.4E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 SUPERFAMILY SSF55120 72 233 7.4E-41 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 108 122 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 SUPERFAMILY SSF55174 12 65 1.85E-11 T 14-10-2018 MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 SMART SM00363 12 68 2.2E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 Gene3D G3DSA:3.10.290.10 7 64 5.8E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 Gene3D G3DSA:3.30.70.1560 140 211 9.8E-33 T 14-10-2018 MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 Gene3D G3DSA:3.30.70.580 65 139 3.4E-22 T 14-10-2018 MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 Pfam PF01479 S4 domain 12 57 4.0E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3831 44216a8797a610dd80ed3d3235dbd94f 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 77 229 3.3E-48 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 MC28_E028 122b999ea9e9a77bc58d3901d33846b1 410 SUPERFAMILY SSF48452 166 301 2.72E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_E028 122b999ea9e9a77bc58d3901d33846b1 410 Gene3D G3DSA:1.25.40.10 45 407 6.5E-78 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1799 2925d624126b3d742c02065c9a7477a1 548 SUPERFAMILY SSF52540 283 489 7.34E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1799 2925d624126b3d742c02065c9a7477a1 548 Gene3D G3DSA:3.40.50.300 7 87 4.9E-14 T 14-10-2018 MC28_1799 2925d624126b3d742c02065c9a7477a1 548 SUPERFAMILY SSF52540 8 220 3.48E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1799 2925d624126b3d742c02065c9a7477a1 548 Pfam PF00005 ABC transporter 316 443 4.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1799 2925d624126b3d742c02065c9a7477a1 548 Gene3D G3DSA:3.40.50.300 88 237 2.3E-35 T 14-10-2018 MC28_1799 2925d624126b3d742c02065c9a7477a1 548 Pfam PF12848 ABC transporter 180 274 6.1E-10 T 14-10-2018 IPR032781 ABC-transporter extension domain MC28_1799 2925d624126b3d742c02065c9a7477a1 548 SMART SM00382 324 494 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1799 2925d624126b3d742c02065c9a7477a1 548 SMART SM00382 35 192 8.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1799 2925d624126b3d742c02065c9a7477a1 548 Gene3D G3DSA:3.40.50.300 260 517 3.2E-48 T 14-10-2018 MC28_1799 2925d624126b3d742c02065c9a7477a1 548 Pfam PF00005 ABC transporter 26 140 4.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 Gene3D G3DSA:1.10.8.500 301 352 1.2E-9 T 14-10-2018 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 SMART SM00304 301 353 1.1E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 SMART SM00304 598 654 26.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 Gene3D G3DSA:3.30.450.20 70 181 2.9E-36 T 14-10-2018 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 Pfam PF02743 Cache domain 42 263 3.5E-26 T 14-10-2018 IPR033479 Double Cache domain 1 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 SMART SM00283 382 657 1.9E-79 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 Gene3D G3DSA:3.30.450.20 59 273 2.9E-36 T 14-10-2018 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 SUPERFAMILY SSF58104 321 657 6.54E-75 T 14-10-2018 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 Pfam PF00672 HAMP domain 302 349 9.4E-16 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 608 1.5E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 SUPERFAMILY SSF103190 90 186 1.88E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily MC28_5280 0391be00712b9e16cb72e6bddd8d5755 658 Gene3D G3DSA:1.10.287.950 358 657 3.4E-70 T 14-10-2018 MC28_2542 2b44bfbf1ba85646a1ff861bb28cc14d 75 Gene3D G3DSA:1.10.260.40 1 74 7.9E-10 T 14-10-2018 MC28_2542 2b44bfbf1ba85646a1ff861bb28cc14d 75 SUPERFAMILY SSF47413 3 72 9.29E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2542 2b44bfbf1ba85646a1ff861bb28cc14d 75 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 9 70 7.2E-23 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_2542 2b44bfbf1ba85646a1ff861bb28cc14d 75 SMART SM00530 9 65 7.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1252 c3c26571afa493eae019928a49bcb23f 138 Hamap MF_01512 Metallothiol transferase FosB [fosB]. 1 138 42.504 T 14-10-2018 IPR022858 Metallothiol transferase FosB GO:0016765|GO:0046677 MC28_1252 c3c26571afa493eae019928a49bcb23f 138 Gene3D G3DSA:3.10.180.10 1 135 5.6E-38 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1252 c3c26571afa493eae019928a49bcb23f 138 SUPERFAMILY SSF54593 3 129 1.79E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1252 c3c26571afa493eae019928a49bcb23f 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 116 2.7E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_3646 a7aca9b5235af523ba583c6d27bb086a 402 Pfam PF08662 Eukaryotic translation initiation factor eIF2A 36 144 3.2E-6 T 14-10-2018 IPR013979 Translation initiation factor, beta propellor-like domain MC28_3646 a7aca9b5235af523ba583c6d27bb086a 402 Gene3D G3DSA:2.120.10.30 15 146 8.0E-13 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like MC28_3646 a7aca9b5235af523ba583c6d27bb086a 402 Gene3D G3DSA:2.120.10.30 150 389 1.4E-8 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like MC28_3646 a7aca9b5235af523ba583c6d27bb086a 402 SUPERFAMILY SSF82171 35 379 1.44E-26 T 14-10-2018 MC28_4827 e2509849a61377edec3accdddff02504 119 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 7 116 30.666 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4827 e2509849a61377edec3accdddff02504 119 SUPERFAMILY SSF54843 5 118 1.57E-45 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_4827 e2509849a61377edec3accdddff02504 119 Gene3D G3DSA:3.90.470.10 7 119 3.7E-51 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_4827 e2509849a61377edec3accdddff02504 119 ProSitePatterns PS00464 Ribosomal protein L22 signature. 89 113 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4827 e2509849a61377edec3accdddff02504 119 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 11 113 1.5E-53 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4827 e2509849a61377edec3accdddff02504 119 Pfam PF00237 Ribosomal protein L22p/L17e 11 113 6.3E-38 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 MC28_0731 7643d8ed282140e8aedae3c7b6a3e64b 225 Gene3D G3DSA:3.40.50.300 1 221 1.4E-88 T 14-10-2018 MC28_0731 7643d8ed282140e8aedae3c7b6a3e64b 225 Pfam PF02224 Cytidylate kinase 7 218 2.6E-82 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 MC28_0731 7643d8ed282140e8aedae3c7b6a3e64b 225 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 34.587 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 MC28_0731 7643d8ed282140e8aedae3c7b6a3e64b 225 SUPERFAMILY SSF52540 5 220 2.42E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0731 7643d8ed282140e8aedae3c7b6a3e64b 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 216 1.4E-91 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 SUPERFAMILY SSF50621 260 399 2.41E-52 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 PRINTS PR00992 Alanine racemase signature 86 104 1.6E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 PRINTS PR00992 Alanine racemase signature 147 159 1.6E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 PRINTS PR00992 Alanine racemase signature 224 251 1.6E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 PRINTS PR00992 Alanine racemase signature 375 388 1.6E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 PRINTS PR00992 Alanine racemase signature 298 313 1.6E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 PRINTS PR00992 Alanine racemase signature 319 336 1.6E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 PRINTS PR00992 Alanine racemase signature 50 66 1.6E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 PRINTS PR00992 Alanine racemase signature 181 192 1.6E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 PRINTS PR00992 Alanine racemase signature 281 296 1.6E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 Gene3D G3DSA:2.40.37.10 28 392 8.9E-132 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 Pfam PF00842 Alanine racemase, C-terminal domain 265 392 1.1E-46 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 TIGRFAM TIGR00492 alr: alanine racemase 24 392 6.2E-119 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 55 65 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 Gene3D G3DSA:3.20.20.10 32 247 8.9E-132 T 14-10-2018 IPR029066 PLP-binding barrel MC28_1291 26847e4ba706dea1802c4230c22861d0 408 SUPERFAMILY SSF51419 30 266 1.31E-65 T 14-10-2018 IPR029066 PLP-binding barrel MC28_1291 26847e4ba706dea1802c4230c22861d0 408 Hamap MF_01201 Alanine racemase. 23 393 34.34 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 SMART SM01005 265 393 2.9E-70 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1291 26847e4ba706dea1802c4230c22861d0 408 Pfam PF01168 Alanine racemase, N-terminal domain 30 251 2.3E-66 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_3369 386a6e580d8c4dae90ff24cd623dafaf 139 SMART SM00345 17 76 9.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3369 386a6e580d8c4dae90ff24cd623dafaf 139 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 4.6E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3369 386a6e580d8c4dae90ff24cd623dafaf 139 SUPERFAMILY SSF46785 6 78 1.25E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3369 386a6e580d8c4dae90ff24cd623dafaf 139 Gene3D G3DSA:1.10.10.10 9 134 5.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1892 5acdd7f64906baf66c4638395259a3b7 272 Pfam PF09234 Domain of unknown function (DUF1963) 43 271 3.1E-66 T 14-10-2018 IPR015315 Protein of unknown function DUF1963 MC28_1892 5acdd7f64906baf66c4638395259a3b7 272 SUPERFAMILY SSF103032 8 271 4.58E-85 T 14-10-2018 IPR035948 YwqG-like superfamily MC28_1892 5acdd7f64906baf66c4638395259a3b7 272 Gene3D G3DSA:2.30.320.10 4 271 1.8E-96 T 14-10-2018 IPR035948 YwqG-like superfamily MC28_5367 0753ba3bd715675e439fd5c24c182afb 272 Pfam PF00005 ABC transporter 47 195 5.6E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5367 0753ba3bd715675e439fd5c24c182afb 272 SUPERFAMILY SSF52540 31 264 8.83E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5367 0753ba3bd715675e439fd5c24c182afb 272 PIRSF PIRSF039085 28 271 9.3E-117 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 MC28_5367 0753ba3bd715675e439fd5c24c182afb 272 SMART SM00382 56 243 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5367 0753ba3bd715675e439fd5c24c182afb 272 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_5367 0753ba3bd715675e439fd5c24c182afb 272 Gene3D G3DSA:3.40.50.300 29 270 1.7E-79 T 14-10-2018 MC28_3061 3326212a90f6530bd22c7ba1f7d5d2c3 296 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 2.2E-119 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis MC28_3061 3326212a90f6530bd22c7ba1f7d5d2c3 296 SUPERFAMILY SSF52540 9 258 1.06E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3061 3326212a90f6530bd22c7ba1f7d5d2c3 296 PIRSF PIRSF006230 1 283 8.2E-106 T 14-10-2018 IPR016478 GTPase, MTG1 MC28_3061 3326212a90f6530bd22c7ba1f7d5d2c3 296 Gene3D G3DSA:3.40.50.300 12 179 1.8E-49 T 14-10-2018 MC28_3061 3326212a90f6530bd22c7ba1f7d5d2c3 296 Gene3D G3DSA:1.10.1580.10 180 272 2.6E-31 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily MC28_3061 3326212a90f6530bd22c7ba1f7d5d2c3 296 Pfam PF01926 50S ribosome-binding GTPase 123 213 3.2E-17 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_4155 69d9c1cb3c505f7785d6fd205af15f72 344 SUPERFAMILY SSF53448 4 301 1.27E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4155 69d9c1cb3c505f7785d6fd205af15f72 344 SUPERFAMILY SSF51161 253 325 3.05E-15 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_4155 69d9c1cb3c505f7785d6fd205af15f72 344 Pfam PF00483 Nucleotidyl transferase 7 149 4.2E-10 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 MC28_4155 69d9c1cb3c505f7785d6fd205af15f72 344 Gene3D G3DSA:2.160.10.10 231 341 1.1E-27 T 14-10-2018 MC28_4155 69d9c1cb3c505f7785d6fd205af15f72 344 Gene3D G3DSA:3.90.550.10 1 157 1.2E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4155 69d9c1cb3c505f7785d6fd205af15f72 344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 289 322 6.0E-5 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_2639 50d357afd88be64679e40d89dd0a9053 567 Gene3D G3DSA:3.10.310.70 105 229 1.9E-106 T 14-10-2018 MC28_2639 50d357afd88be64679e40d89dd0a9053 567 Pfam PF07969 Amidohydrolase family 74 563 4.4E-88 T 14-10-2018 IPR013108 Amidohydrolase 3 MC28_2639 50d357afd88be64679e40d89dd0a9053 567 Gene3D G3DSA:3.20.20.140 86 522 1.9E-106 T 14-10-2018 MC28_2639 50d357afd88be64679e40d89dd0a9053 567 Gene3D G3DSA:2.30.40.10 33 539 1.9E-106 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_2639 50d357afd88be64679e40d89dd0a9053 567 SUPERFAMILY SSF51556 85 523 7.56E-27 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_2639 50d357afd88be64679e40d89dd0a9053 567 SUPERFAMILY SSF51338 26 565 8.13E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_1837 7c95e1fcf9fc411282257a278751ea20 283 SUPERFAMILY SSF56784 2 282 1.03E-68 T 14-10-2018 IPR036412 HAD-like superfamily MC28_1837 7c95e1fcf9fc411282257a278751ea20 283 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 251 4.8E-27 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 MC28_1837 7c95e1fcf9fc411282257a278751ea20 283 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 278 1.8E-77 T 14-10-2018 MC28_1837 7c95e1fcf9fc411282257a278751ea20 283 Gene3D G3DSA:3.30.1240.10 80 207 1.7E-84 T 14-10-2018 MC28_1837 7c95e1fcf9fc411282257a278751ea20 283 Gene3D G3DSA:3.40.50.1000 2 275 1.7E-84 T 14-10-2018 IPR023214 HAD superfamily MC28_1837 7c95e1fcf9fc411282257a278751ea20 283 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 14-10-2018 MC28_1837 7c95e1fcf9fc411282257a278751ea20 283 ProSitePatterns PS01229 Hypothetical cof family signature 2. 232 254 - T 14-10-2018 MC28_1837 7c95e1fcf9fc411282257a278751ea20 283 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 278 7.3E-56 T 14-10-2018 IPR000150 Cof family GO:0016787 MC28_2656 688b6a450af6bfac6a250491709abd1e 488 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 7 474 46.747 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 MC28_2656 688b6a450af6bfac6a250491709abd1e 488 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 12 458 7.5E-122 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 MC28_0930 a9c96443a4ac56e7c42cf665f23309c2 297 Pfam PF03466 LysR substrate binding domain 90 283 4.7E-39 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_0930 a9c96443a4ac56e7c42cf665f23309c2 297 SUPERFAMILY SSF53850 90 295 1.24E-37 T 14-10-2018 MC28_0930 a9c96443a4ac56e7c42cf665f23309c2 297 Gene3D G3DSA:3.40.190.290 92 296 1.5E-40 T 14-10-2018 MC28_0930 a9c96443a4ac56e7c42cf665f23309c2 297 SUPERFAMILY SSF46785 2 111 1.59E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0930 a9c96443a4ac56e7c42cf665f23309c2 297 Gene3D G3DSA:1.10.10.10 1 91 2.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0930 a9c96443a4ac56e7c42cf665f23309c2 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.6E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_0930 a9c96443a4ac56e7c42cf665f23309c2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_0930 a9c96443a4ac56e7c42cf665f23309c2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_0930 a9c96443a4ac56e7c42cf665f23309c2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_0591 92ed1e61a3b1768656ec0b1f20e63de0 460 SUPERFAMILY SSF53383 80 454 4.65E-125 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0591 92ed1e61a3b1768656ec0b1f20e63de0 460 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 24 454 5.9E-199 T 14-10-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 MC28_0591 92ed1e61a3b1768656ec0b1f20e63de0 460 Gene3D G3DSA:3.90.1150.10 43 452 3.2E-183 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_0591 92ed1e61a3b1768656ec0b1f20e63de0 460 PIRSF PIRSF000521 173 210 2.5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0591 92ed1e61a3b1768656ec0b1f20e63de0 460 PIRSF PIRSF000521 63 178 1.3E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0591 92ed1e61a3b1768656ec0b1f20e63de0 460 PIRSF PIRSF000521 219 457 3.6E-42 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0591 92ed1e61a3b1768656ec0b1f20e63de0 460 Gene3D G3DSA:3.40.640.10 108 358 3.2E-183 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_0591 92ed1e61a3b1768656ec0b1f20e63de0 460 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 273 310 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0591 92ed1e61a3b1768656ec0b1f20e63de0 460 Pfam PF00202 Aminotransferase class-III 78 454 2.4E-105 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3021 a73bf4076b5c3ec888a4842222cd8ef2 63 SMART SM00530 6 61 2.0E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3021 a73bf4076b5c3ec888a4842222cd8ef2 63 SUPERFAMILY SSF47413 1 62 1.55E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3021 a73bf4076b5c3ec888a4842222cd8ef2 63 Gene3D G3DSA:1.10.260.40 1 63 9.8E-13 T 14-10-2018 MC28_3021 a73bf4076b5c3ec888a4842222cd8ef2 63 Pfam PF01381 Helix-turn-helix 7 59 1.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1707 e375be0e8a79b7f225da495dc2d60623 179 SUPERFAMILY SSF88946 12 94 3.45E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_1707 e375be0e8a79b7f225da495dc2d60623 179 Gene3D G3DSA:1.10.10.10 95 173 5.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1707 e375be0e8a79b7f225da495dc2d60623 179 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 41 72 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_1707 e375be0e8a79b7f225da495dc2d60623 179 Gene3D G3DSA:1.10.1740.10 3 82 1.0E-20 T 14-10-2018 MC28_1707 e375be0e8a79b7f225da495dc2d60623 179 Pfam PF08281 Sigma-70, region 4 115 166 1.2E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_1707 e375be0e8a79b7f225da495dc2d60623 179 SUPERFAMILY SSF88659 109 171 4.58E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_1707 e375be0e8a79b7f225da495dc2d60623 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 169 1.1E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_1707 e375be0e8a79b7f225da495dc2d60623 179 Pfam PF04542 Sigma-70 region 2 20 83 3.7E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_2259 68c3db040922dc66d73147670d37c90c 170 Pfam PF04989 Cephalosporin hydroxylase 2 169 3.3E-61 T 14-10-2018 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 MC28_2259 68c3db040922dc66d73147670d37c90c 170 SUPERFAMILY SSF53335 1 167 4.68E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2259 68c3db040922dc66d73147670d37c90c 170 Gene3D G3DSA:3.40.50.150 1 159 4.9E-36 T 14-10-2018 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 PIRSF PIRSF001415 1 326 1.2E-155 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 Pfam PF00490 Delta-aminolevulinic acid dehydratase 7 322 5.3E-151 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 Gene3D G3DSA:3.20.20.70 2 324 8.2E-150 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 267 282 1.2E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 242 258 1.2E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 297 316 1.2E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 190 209 1.2E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 1.2E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 152 171 1.2E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 242 254 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 SMART SM01004 4 323 2.0E-241 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 MC28_3754 38bfc9bbe6b0ed225dcbdb800a5d8b38 329 SUPERFAMILY SSF51569 5 325 1.34E-144 T 14-10-2018 MC28_3678 b886f903dab86441d34bf0a61d77a8b7 91 Hamap MF_01507 UPF0297 protein . 4 88 28.156 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 MC28_3678 b886f903dab86441d34bf0a61d77a8b7 91 Pfam PF06135 Bacterial protein of unknown function (DUF965) 8 86 2.3E-37 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 MC28_3678 b886f903dab86441d34bf0a61d77a8b7 91 PIRSF PIRSF037258 4 91 7.3E-45 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 MC28_1975 0504b8fb7201f6050cbf8f2c38be22d5 278 SUPERFAMILY SSF161098 87 270 3.66E-38 T 14-10-2018 IPR035906 MetI-like superfamily MC28_1975 0504b8fb7201f6050cbf8f2c38be22d5 278 Gene3D G3DSA:1.10.3720.10 83 275 3.0E-34 T 14-10-2018 IPR035906 MetI-like superfamily MC28_1975 0504b8fb7201f6050cbf8f2c38be22d5 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 267 1.1E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 99 453 4.7E-124 T 14-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 102 451 3.3E-99 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 SUPERFAMILY SSF56322 9 456 4.58E-152 T 14-10-2018 IPR005801 ADC synthase GO:0009058 MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 Pfam PF00425 chorismate binding enzyme 196 449 3.1E-102 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 21 457 5.9E-157 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 PRINTS PR00095 Anthranilate synthase component I signature 406 420 2.9E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 PRINTS PR00095 Anthranilate synthase component I signature 311 324 2.9E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 PRINTS PR00095 Anthranilate synthase component I signature 391 405 2.9E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 PRINTS PR00095 Anthranilate synthase component I signature 297 310 2.9E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 149 1.2E-31 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_4783 b151f5d4b0ee0f4628b2a99318bb8b49 465 Gene3D G3DSA:3.60.120.10 10 464 1.7E-170 T 14-10-2018 IPR005801 ADC synthase GO:0009058 MC28_3689 27c348532a44db408f21cd489c3ffbc7 138 Gene3D G3DSA:1.10.10.10 1 138 8.3E-52 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3689 27c348532a44db408f21cd489c3ffbc7 138 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site MC28_3689 27c348532a44db408f21cd489c3ffbc7 138 SUPERFAMILY SSF46785 2 125 9.43E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3689 27c348532a44db408f21cd489c3ffbc7 138 Pfam PF02082 Transcriptional regulator 1 82 2.2E-26 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type MC28_3689 27c348532a44db408f21cd489c3ffbc7 138 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 125 1.1E-34 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type MC28_2558 e1d92705742589029ed88a14f92000bf 452 Pfam PF00082 Subtilase family 119 362 1.1E-21 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_2558 e1d92705742589029ed88a14f92000bf 452 SUPERFAMILY SSF52743 55 374 1.44E-39 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_2558 e1d92705742589029ed88a14f92000bf 452 PRINTS PR00723 Subtilisin serine protease family (S8) signature 88 107 1.1E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_2558 e1d92705742589029ed88a14f92000bf 452 PRINTS PR00723 Subtilisin serine protease family (S8) signature 318 334 1.1E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_2558 e1d92705742589029ed88a14f92000bf 452 PRINTS PR00723 Subtilisin serine protease family (S8) signature 121 134 1.1E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_2558 e1d92705742589029ed88a14f92000bf 452 Gene3D G3DSA:3.40.50.200 53 384 4.6E-40 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_2558 e1d92705742589029ed88a14f92000bf 452 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 319 329 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_0781 23053b395362234d3d0068ab797e7176 215 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 MC28_0781 23053b395362234d3d0068ab797e7176 215 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 170 1.2E-25 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 MC28_0781 23053b395362234d3d0068ab797e7176 215 SUPERFAMILY SSF48150 1 210 1.27E-74 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 MC28_0781 23053b395362234d3d0068ab797e7176 215 SMART SM00478 39 187 2.8E-69 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 MC28_0781 23053b395362234d3d0068ab797e7176 215 Gene3D G3DSA:1.10.1670.10 16 205 1.1E-80 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 MC28_0781 23053b395362234d3d0068ab797e7176 215 Gene3D G3DSA:1.10.340.30 22 133 1.1E-80 T 14-10-2018 MC28_0781 23053b395362234d3d0068ab797e7176 215 Hamap MF_00942 Endonuclease III [nth]. 1 211 38.634 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 MC28_0781 23053b395362234d3d0068ab797e7176 215 PIRSF PIRSF001435 1 213 1.8E-59 T 14-10-2018 MC28_0781 23053b395362234d3d0068ab797e7176 215 TIGRFAM TIGR01083 nth: endonuclease III 6 196 5.6E-87 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 MC28_0781 23053b395362234d3d0068ab797e7176 215 Pfam PF00633 Helix-hairpin-helix motif 101 128 6.4E-10 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 MC28_2305 0a38b3ca30999d0a8fa946bfc776ef9e 311 Gene3D G3DSA:1.20.58.340 115 236 1.5E-6 T 14-10-2018 MC28_2305 0a38b3ca30999d0a8fa946bfc776ef9e 311 SUPERFAMILY SSF143865 68 219 6.67E-8 T 14-10-2018 MC28_2305 0a38b3ca30999d0a8fa946bfc776ef9e 311 Pfam PF01544 CorA-like Mg2+ transporter protein 52 290 1.4E-35 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 MC28_2305 0a38b3ca30999d0a8fa946bfc776ef9e 311 Gene3D G3DSA:1.20.58.340 238 295 2.6E-14 T 14-10-2018 MC28_2305 0a38b3ca30999d0a8fa946bfc776ef9e 311 SUPERFAMILY SSF144083 231 292 3.4E-17 T 14-10-2018 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 Gene3D G3DSA:1.10.10.10 4 67 4.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 Hamap MF_00173 Arginine repressor [argR]. 1 152 50.653 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 PRINTS PR01467 Bacterial arginine repressor signature 24 37 1.2E-16 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.2E-16 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 PRINTS PR01467 Bacterial arginine repressor signature 40 55 1.2E-16 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 PRINTS PR01467 Bacterial arginine repressor signature 91 104 1.2E-16 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 Gene3D G3DSA:3.30.1360.40 71 152 3.6E-24 T 14-10-2018 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 Pfam PF01316 Arginine repressor, DNA binding domain 4 71 7.1E-21 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 90 130 3.0E-18 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 SUPERFAMILY SSF55252 83 148 1.7E-18 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 SUPERFAMILY SSF46785 3 73 5.51E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 Pfam PF02863 Arginine repressor, C-terminal domain 83 148 1.4E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 MC28_5086 570110d8dbfa4e096ef1fb29a7bb3a34 152 TIGRFAM TIGR01529 argR_whole: arginine repressor 8 150 3.3E-40 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_3093 d5403ff2812556da69586897a276b25a 70 SUPERFAMILY SSF63562 1 63 7.32E-19 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 MC28_3093 d5403ff2812556da69586897a276b25a 70 Pfam PF01192 RNA polymerase Rpb6 9 59 1.2E-11 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 MC28_3093 d5403ff2812556da69586897a276b25a 70 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 6.5E-21 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_3093 d5403ff2812556da69586897a276b25a 70 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 12.724 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_3093 d5403ff2812556da69586897a276b25a 70 SMART SM01409 8 61 1.6E-11 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 MC28_3093 d5403ff2812556da69586897a276b25a 70 Gene3D G3DSA:3.90.940.10 1 68 8.6E-15 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 MC28_C065 a6728d9a59caad1b20a819bca27b0ca2 462 SUPERFAMILY SSF50370 325 460 4.04E-28 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_C065 a6728d9a59caad1b20a819bca27b0ca2 462 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 371 446 3.5E-8 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_C065 a6728d9a59caad1b20a819bca27b0ca2 462 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 58 169 2.3E-6 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_C065 a6728d9a59caad1b20a819bca27b0ca2 462 Gene3D G3DSA:3.20.20.190 14 274 3.0E-64 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_C065 a6728d9a59caad1b20a819bca27b0ca2 462 Gene3D G3DSA:2.80.10.50 323 462 2.4E-34 T 14-10-2018 MC28_C065 a6728d9a59caad1b20a819bca27b0ca2 462 SMART SM00148 26 171 9.2E-7 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_C065 a6728d9a59caad1b20a819bca27b0ca2 462 SMART SM00458 326 460 3.8E-11 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_C065 a6728d9a59caad1b20a819bca27b0ca2 462 SUPERFAMILY SSF51695 16 319 3.14E-48 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 410 8.6E-154 T 14-10-2018 IPR008135 Competence-induced protein CinA MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 Gene3D G3DSA:3.90.950.20 252 412 2.7E-48 T 14-10-2018 IPR036653 CinA-like, C-terminal MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 SUPERFAMILY SSF53218 1 205 5.76E-41 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 2.3E-32 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 166.222 T 14-10-2018 IPR008135 Competence-induced protein CinA MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 Pfam PF02464 Competence-damaged protein 258 408 6.7E-50 T 14-10-2018 IPR008136 CinA, C-terminal MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 264 409 4.2E-43 T 14-10-2018 IPR008136 CinA, C-terminal MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 SUPERFAMILY SSF142433 249 410 4.97E-46 T 14-10-2018 IPR036653 CinA-like, C-terminal MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 PIRSF PIRSF006728 1 412 3.0E-166 T 14-10-2018 IPR008135 Competence-induced protein CinA MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 Pfam PF00994 Probable molybdopterin binding domain 4 169 3.7E-36 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 SMART SM00852 4 170 2.4E-41 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_2951 9991fa8bb6800815d835dcdfa8c295d4 412 Gene3D G3DSA:3.40.980.10 1 169 4.5E-50 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_3279 6334f3ba62f0c62bec6282cbde62e6aa 405 Gene3D G3DSA:3.30.450.20 291 405 1.2E-43 T 14-10-2018 MC28_3279 6334f3ba62f0c62bec6282cbde62e6aa 405 Pfam PF10388 EAL-domain associated signalling protein domain 240 404 1.9E-80 T 14-10-2018 IPR018842 YkuI, C-terminal MC28_3279 6334f3ba62f0c62bec6282cbde62e6aa 405 SUPERFAMILY SSF103190 263 400 1.65E-42 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily MC28_3279 6334f3ba62f0c62bec6282cbde62e6aa 405 SUPERFAMILY SSF141868 4 256 1.31E-41 T 14-10-2018 IPR035919 EAL domain superfamily MC28_3279 6334f3ba62f0c62bec6282cbde62e6aa 405 SMART SM00052 3 241 2.2E-12 T 14-10-2018 IPR001633 EAL domain MC28_3279 6334f3ba62f0c62bec6282cbde62e6aa 405 Gene3D G3DSA:1.20.5.170 246 290 1.8E-12 T 14-10-2018 MC28_3279 6334f3ba62f0c62bec6282cbde62e6aa 405 Pfam PF00563 EAL domain 12 233 6.3E-29 T 14-10-2018 IPR001633 EAL domain MC28_3279 6334f3ba62f0c62bec6282cbde62e6aa 405 Gene3D G3DSA:3.20.20.450 1 229 4.6E-59 T 14-10-2018 IPR035919 EAL domain superfamily MC28_3046 2b122181bbd56d97a2ee9746816340df 258 Pfam PF01255 Putative undecaprenyl diphosphate synthase 36 256 7.5E-86 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 MC28_3046 2b122181bbd56d97a2ee9746816340df 258 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 29 256 5.3E-87 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 MC28_3046 2b122181bbd56d97a2ee9746816340df 258 Gene3D G3DSA:3.40.1180.10 11 258 5.0E-102 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 MC28_3046 2b122181bbd56d97a2ee9746816340df 258 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 29 257 40.708 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 MC28_3046 2b122181bbd56d97a2ee9746816340df 258 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 202 219 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 MC28_3046 2b122181bbd56d97a2ee9746816340df 258 SUPERFAMILY SSF64005 25 251 2.09E-90 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 MC28_4694 41855775fb7ecc9657998a15b9269c3c 258 Pfam PF00753 Metallo-beta-lactamase superfamily 6 212 5.6E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_4694 41855775fb7ecc9657998a15b9269c3c 258 SMART SM00849 7 187 5.4E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_4694 41855775fb7ecc9657998a15b9269c3c 258 Gene3D G3DSA:3.60.15.10 3 243 1.0E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_4694 41855775fb7ecc9657998a15b9269c3c 258 SUPERFAMILY SSF56281 3 245 3.41E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_C041 f071e9ecb18438c8d286bb2882466a6e 375 Pfam PF01551 Peptidase family M23 266 360 3.8E-26 T 14-10-2018 IPR016047 Peptidase M23 MC28_C041 f071e9ecb18438c8d286bb2882466a6e 375 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 105 185 1.1E-11 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 MC28_C041 f071e9ecb18438c8d286bb2882466a6e 375 SUPERFAMILY SSF51261 241 373 1.46E-37 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_C041 f071e9ecb18438c8d286bb2882466a6e 375 Gene3D G3DSA:2.70.70.10 235 375 2.9E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 PIRSF PIRSF001365 6 305 3.6E-97 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 44 65 1.3E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 137 154 1.3E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 112 128 1.3E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 80 98 1.3E-20 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 SMART SM01130 10 300 1.3E-103 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 SUPERFAMILY SSF51569 8 298 6.07E-87 T 14-10-2018 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 47 64 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 16 297 3.9E-71 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 Gene3D G3DSA:3.20.20.70 3 301 1.2E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2021 6c2f14cee04b114bfc5ef76a3c139358 305 Pfam PF00701 Dihydrodipicolinate synthetase family 11 298 1.7E-72 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_4036 5cbfd25013066f555d051fbb707bb9c5 120 SUPERFAMILY SSF51735 4 91 1.5E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4036 5cbfd25013066f555d051fbb707bb9c5 120 Gene3D G3DSA:3.40.50.720 1 94 7.1E-8 T 14-10-2018 MC28_4036 5cbfd25013066f555d051fbb707bb9c5 120 Pfam PF00106 short chain dehydrogenase 28 90 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2400 3d387bd904736c5a10f26a8178981bb7 206 Pfam PF07690 Major Facilitator Superfamily 28 199 5.8E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2400 3d387bd904736c5a10f26a8178981bb7 206 SUPERFAMILY SSF103473 9 202 1.96E-16 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2400 3d387bd904736c5a10f26a8178981bb7 206 Gene3D G3DSA:1.20.1250.20 3 201 1.1E-11 T 14-10-2018 MC28_4598 f55a99354d203060474f975262b5db39 556 SUPERFAMILY SSF52374 118 448 3.75E-95 T 14-10-2018 MC28_4598 f55a99354d203060474f975262b5db39 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 11 94 4.2E-25 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_4598 f55a99354d203060474f975262b5db39 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 556 28.208 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_4598 f55a99354d203060474f975262b5db39 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 4.9E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_4598 f55a99354d203060474f975262b5db39 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 4.9E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_4598 f55a99354d203060474f975262b5db39 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 4.9E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_4598 f55a99354d203060474f975262b5db39 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 4.9E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_4598 f55a99354d203060474f975262b5db39 556 SUPERFAMILY SSF55190 6 115 4.84E-27 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 MC28_4598 f55a99354d203060474f975262b5db39 556 SMART SM00836 437 556 4.1E-56 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 MC28_4598 f55a99354d203060474f975262b5db39 556 Gene3D G3DSA:3.40.50.620 124 431 6.2E-173 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_4598 f55a99354d203060474f975262b5db39 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4598 f55a99354d203060474f975262b5db39 556 Pfam PF00750 tRNA synthetases class I (R) 107 403 1.2E-24 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 MC28_4598 f55a99354d203060474f975262b5db39 556 SUPERFAMILY SSF47323 431 556 1.9E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4598 f55a99354d203060474f975262b5db39 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 9 556 2.1E-169 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_4598 f55a99354d203060474f975262b5db39 556 Pfam PF05746 DALR anticodon binding domain 438 556 2.1E-36 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 MC28_4598 f55a99354d203060474f975262b5db39 556 Gene3D G3DSA:1.10.730.10 432 556 6.2E-173 T 14-10-2018 MC28_4598 f55a99354d203060474f975262b5db39 556 SMART SM01016 5 95 6.6E-35 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_4598 f55a99354d203060474f975262b5db39 556 Gene3D G3DSA:3.30.1360.70 3 113 1.9E-27 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 MC28_2455 bf46092ab7f7ce8c205ed3bc363fdb48 311 Pfam PF01048 Phosphorylase superfamily 61 303 1.6E-35 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 MC28_2455 bf46092ab7f7ce8c205ed3bc363fdb48 311 SUPERFAMILY SSF53167 61 288 1.0E-43 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 MC28_2455 bf46092ab7f7ce8c205ed3bc363fdb48 311 Gene3D G3DSA:3.40.50.1580 57 308 9.7E-79 T 14-10-2018 MC28_5259 ffe872c3c4696e1b9a75ab39764ab1a6 134 Pfam PF07885 Ion channel 44 126 1.2E-11 T 14-10-2018 IPR013099 Potassium channel domain MC28_5259 ffe872c3c4696e1b9a75ab39764ab1a6 134 Gene3D G3DSA:1.10.287.70 23 132 7.6E-12 T 14-10-2018 MC28_5259 ffe872c3c4696e1b9a75ab39764ab1a6 134 SUPERFAMILY SSF81324 24 123 3.59E-11 T 14-10-2018 MC28_5063 e602733f993c7585f99cacb57164955c 213 SMART SM01007 8 184 2.6E-60 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal MC28_5063 e602733f993c7585f99cacb57164955c 213 Gene3D G3DSA:3.40.225.10 1 213 3.0E-74 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily MC28_5063 e602733f993c7585f99cacb57164955c 213 SUPERFAMILY SSF53639 2 212 2.94E-62 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily MC28_5063 e602733f993c7585f99cacb57164955c 213 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 184 5.7E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal MC28_4458 eaa99e59ef73c6ead781b10304873725 402 PIRSF PIRSF006446 1 402 8.4E-91 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 MC28_4458 eaa99e59ef73c6ead781b10304873725 402 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 1 387 7.5E-101 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 MC28_0271 38a4b29a56b22910975c7d01aaa2d896 135 Pfam PF03551 Transcriptional regulator PadR-like family 48 116 1.8E-13 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_0271 38a4b29a56b22910975c7d01aaa2d896 135 SUPERFAMILY SSF46785 44 123 8.06E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0271 38a4b29a56b22910975c7d01aaa2d896 135 Gene3D G3DSA:1.10.10.10 23 134 1.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0988 f09a885d1952254da5d856f46f0badb4 246 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 237 2.6E-94 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 MC28_0988 f09a885d1952254da5d856f46f0badb4 246 Gene3D G3DSA:3.40.1160.10 1 246 5.4E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_0988 f09a885d1952254da5d856f46f0badb4 246 Pfam PF00696 Amino acid kinase family 5 216 8.3E-25 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 MC28_0988 f09a885d1952254da5d856f46f0badb4 246 PIRSF PIRSF005650 1 246 1.8E-81 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 MC28_0988 f09a885d1952254da5d856f46f0badb4 246 SUPERFAMILY SSF53633 3 237 8.77E-59 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_0988 f09a885d1952254da5d856f46f0badb4 246 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 237 36.864 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 Gene3D G3DSA:1.10.3860.10 1 411 7.9E-134 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 PRINTS PR00173 Glutamate-aspartate symporter signature 224 243 6.0E-52 T 14-10-2018 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 6.0E-52 T 14-10-2018 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 PRINTS PR00173 Glutamate-aspartate symporter signature 326 345 6.0E-52 T 14-10-2018 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 6.0E-52 T 14-10-2018 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 PRINTS PR00173 Glutamate-aspartate symporter signature 353 373 6.0E-52 T 14-10-2018 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 6.0E-52 T 14-10-2018 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 PRINTS PR00173 Glutamate-aspartate symporter signature 291 317 6.0E-52 T 14-10-2018 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 PRINTS PR00173 Glutamate-aspartate symporter signature 189 208 6.0E-52 T 14-10-2018 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 SUPERFAMILY SSF118215 6 400 1.16E-119 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_0626 23b878f54ec69d64345dc41c017496b7 411 Pfam PF00375 Sodium:dicarboxylate symporter family 6 398 2.3E-131 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 MC28_1220 d11469f4860a19022fc8638e1834d050 501 SMART SM00857 8 156 5.2E-23 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_1220 d11469f4860a19022fc8638e1834d050 501 Pfam PF07508 Recombinase 178 289 8.8E-19 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 MC28_1220 d11469f4860a19022fc8638e1834d050 501 SUPERFAMILY SSF53041 8 156 2.75E-19 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_1220 d11469f4860a19022fc8638e1834d050 501 Gene3D G3DSA:1.10.10.2600 140 291 1.4E-11 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily MC28_1220 d11469f4860a19022fc8638e1834d050 501 Pfam PF00239 Resolvase, N terminal domain 8 156 5.4E-18 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_1220 d11469f4860a19022fc8638e1834d050 501 Gene3D G3DSA:3.40.50.1390 5 138 3.2E-19 T 14-10-2018 MC28_3448 223c113001f6a82f5a09397cf3f254ca 163 ProSitePatterns PS00893 Nudix box signature. 58 79 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_3448 223c113001f6a82f5a09397cf3f254ca 163 SUPERFAMILY SSF55811 10 156 4.2E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_3448 223c113001f6a82f5a09397cf3f254ca 163 PRINTS PR00502 NUDIX hydrolase family signature 67 82 1.6E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_3448 223c113001f6a82f5a09397cf3f254ca 163 PRINTS PR00502 NUDIX hydrolase family signature 53 67 1.6E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_3448 223c113001f6a82f5a09397cf3f254ca 163 Pfam PF00293 NUDIX domain 29 152 1.6E-24 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_3448 223c113001f6a82f5a09397cf3f254ca 163 Gene3D G3DSA:3.90.79.10 9 160 1.8E-38 T 14-10-2018 MC28_5140 e2a11df68bc19343ada1cb81e331602a 197 Pfam PF09335 SNARE associated Golgi protein 30 156 1.6E-18 T 14-10-2018 IPR032816 SNARE associated Golgi protein MC28_4118 c4df1f709141dd805b150b5481fdc96c 524 Pfam PF16949 Putative ATP-binding cassette 66 204 3.8E-6 T 14-10-2018 IPR031599 Putative ATP-binding cassette MC28_4219 b6e858981fd588cf38ec548091f97e5f 159 SUPERFAMILY SSF55729 2 139 1.46E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4219 b6e858981fd588cf38ec548091f97e5f 159 Pfam PF13302 Acetyltransferase (GNAT) domain 40 137 3.9E-6 T 14-10-2018 IPR000182 GNAT domain MC28_4219 b6e858981fd588cf38ec548091f97e5f 159 Gene3D G3DSA:3.40.630.30 1 150 4.1E-16 T 14-10-2018 MC28_2251 ef588c7c50dad77df2335abc0250ea70 149 SUPERFAMILY SSF55729 2 138 1.18E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2251 ef588c7c50dad77df2335abc0250ea70 149 Pfam PF13302 Acetyltransferase (GNAT) domain 41 134 4.9E-21 T 14-10-2018 IPR000182 GNAT domain MC28_2251 ef588c7c50dad77df2335abc0250ea70 149 Gene3D G3DSA:3.40.630.30 1 145 1.7E-29 T 14-10-2018 MC28_0105 d09010eecef6c22a1e4ee638c0d5b6c8 320 SUPERFAMILY SSF103481 55 157 1.1E-17 T 14-10-2018 MC28_0105 d09010eecef6c22a1e4ee638c0d5b6c8 320 Pfam PF00892 EamA-like transporter family 169 301 4.4E-30 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0105 d09010eecef6c22a1e4ee638c0d5b6c8 320 Pfam PF00892 EamA-like transporter family 22 154 4.2E-28 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0105 d09010eecef6c22a1e4ee638c0d5b6c8 320 SUPERFAMILY SSF103481 206 303 3.14E-16 T 14-10-2018 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 PIRSF PIRSF000102 2 313 8.8E-117 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 SUPERFAMILY SSF51735 4 145 2.14E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 314 48.501 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 SUPERFAMILY SSF56327 146 312 2.74E-59 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 308 3.8E-136 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 9.3E-50 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 9.3E-50 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 9.3E-50 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 9.3E-50 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 9.3E-50 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 Gene3D G3DSA:3.90.110.10 148 313 1.3E-64 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 Gene3D G3DSA:3.40.50.720 2 147 1.2E-59 T 14-10-2018 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 311 7.8E-39 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 145 3.8E-49 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_4160 705f5f08e08f4f457b417fd8399d89e9 314 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 MC28_1269 2237df84afd85717d9c2a0da46caa380 435 Gene3D G3DSA:3.10.580.10 195 345 8.3E-49 T 14-10-2018 MC28_1269 2237df84afd85717d9c2a0da46caa380 435 SMART SM01091 351 430 5.3E-15 T 14-10-2018 IPR005170 Transporter-associated domain MC28_1269 2237df84afd85717d9c2a0da46caa380 435 Gene3D G3DSA:3.30.465.10 346 434 4.9E-15 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 MC28_1269 2237df84afd85717d9c2a0da46caa380 435 Pfam PF00571 CBS domain 217 269 0.0012 T 14-10-2018 IPR000644 CBS domain MC28_1269 2237df84afd85717d9c2a0da46caa380 435 Pfam PF00571 CBS domain 286 334 8.2E-4 T 14-10-2018 IPR000644 CBS domain MC28_1269 2237df84afd85717d9c2a0da46caa380 435 SUPERFAMILY SSF56176 349 429 6.54E-14 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_1269 2237df84afd85717d9c2a0da46caa380 435 SUPERFAMILY SSF54631 204 338 2.15E-27 T 14-10-2018 MC28_1269 2237df84afd85717d9c2a0da46caa380 435 Pfam PF01595 Domain of unknown function DUF21 7 201 1.8E-48 T 14-10-2018 IPR002550 CNNM, transmembrane domain MC28_1269 2237df84afd85717d9c2a0da46caa380 435 Pfam PF03471 Transporter associated domain 359 429 2.1E-13 T 14-10-2018 IPR005170 Transporter-associated domain MC28_1818 7efb8583f054a0bfeae5ff04b195edc3 341 Gene3D G3DSA:3.30.470.20 206 336 3.1E-7 T 14-10-2018 MC28_1818 7efb8583f054a0bfeae5ff04b195edc3 341 SUPERFAMILY SSF56059 110 324 4.37E-17 T 14-10-2018 MC28_1818 7efb8583f054a0bfeae5ff04b195edc3 341 Pfam PF14398 YheC/D like ATP-grasp 91 336 2.7E-68 T 14-10-2018 IPR026838 Endospore coat-associated protein YheC/D MC28_2648 918d4fc20411f2e8e9fe3082e80681d1 283 Gene3D G3DSA:1.10.10.10 1 90 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2648 918d4fc20411f2e8e9fe3082e80681d1 283 SUPERFAMILY SSF53850 88 280 4.62E-35 T 14-10-2018 MC28_2648 918d4fc20411f2e8e9fe3082e80681d1 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2648 918d4fc20411f2e8e9fe3082e80681d1 283 Gene3D G3DSA:3.40.190.290 91 283 5.0E-38 T 14-10-2018 MC28_2648 918d4fc20411f2e8e9fe3082e80681d1 283 Pfam PF03466 LysR substrate binding domain 87 280 4.6E-41 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_2648 918d4fc20411f2e8e9fe3082e80681d1 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2648 918d4fc20411f2e8e9fe3082e80681d1 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2648 918d4fc20411f2e8e9fe3082e80681d1 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2648 918d4fc20411f2e8e9fe3082e80681d1 283 SUPERFAMILY SSF46785 2 111 1.69E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4790 c4fbbfe678025a831430a16691246af9 496 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 12 494 46.274 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4790 c4fbbfe678025a831430a16691246af9 496 Gene3D G3DSA:3.30.930.10 147 491 5.0E-137 T 14-10-2018 MC28_4790 c4fbbfe678025a831430a16691246af9 496 SUPERFAMILY SSF55681 153 492 6.97E-123 T 14-10-2018 MC28_4790 c4fbbfe678025a831430a16691246af9 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 190 200 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4790 c4fbbfe678025a831430a16691246af9 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4790 c4fbbfe678025a831430a16691246af9 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4790 c4fbbfe678025a831430a16691246af9 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 235 248 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4790 c4fbbfe678025a831430a16691246af9 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 253 270 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4790 c4fbbfe678025a831430a16691246af9 496 Pfam PF01336 OB-fold nucleic acid binding domain 60 137 1.6E-14 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 MC28_4790 c4fbbfe678025a831430a16691246af9 496 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 494 6.3E-223 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4790 c4fbbfe678025a831430a16691246af9 496 Pfam PF00152 tRNA synthetases class II (D, K and N) 154 491 3.2E-82 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4790 c4fbbfe678025a831430a16691246af9 496 Gene3D G3DSA:2.40.50.140 6 146 9.9E-45 T 14-10-2018 MC28_4790 c4fbbfe678025a831430a16691246af9 496 SUPERFAMILY SSF50249 5 146 2.36E-43 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4790 c4fbbfe678025a831430a16691246af9 496 PIRSF PIRSF039101 2 496 1.2E-199 T 14-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_0408 5987186840a7e7550195977cc1da9859 481 PIRSF PIRSF006603 13 474 6.7E-86 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0408 5987186840a7e7550195977cc1da9859 481 Pfam PF01554 MatE 264 424 5.8E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0408 5987186840a7e7550195977cc1da9859 481 Pfam PF01554 MatE 39 199 3.0E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0408 5987186840a7e7550195977cc1da9859 481 TIGRFAM TIGR00797 matE: MATE efflux family protein 39 438 1.3E-65 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_1390 68eeccd7d7d1467ef304a861326a2f7f 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 9.2E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1390 68eeccd7d7d1467ef304a861326a2f7f 194 Gene3D G3DSA:1.10.357.10 1 178 2.7E-22 T 14-10-2018 MC28_1390 68eeccd7d7d1467ef304a861326a2f7f 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1390 68eeccd7d7d1467ef304a861326a2f7f 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1390 68eeccd7d7d1467ef304a861326a2f7f 194 SUPERFAMILY SSF46689 3 63 4.24E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3384 8acd81e736d77aec69bd9b8c2367ca6a 151 SUPERFAMILY SSF46785 6 142 6.65E-38 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3384 8acd81e736d77aec69bd9b8c2367ca6a 151 Pfam PF01475 Ferric uptake regulator family 16 136 1.5E-38 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 MC28_3384 8acd81e736d77aec69bd9b8c2367ca6a 151 Gene3D G3DSA:1.10.10.10 1 88 5.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3384 8acd81e736d77aec69bd9b8c2367ca6a 151 Gene3D G3DSA:3.30.1490.190 93 150 1.0E-17 T 14-10-2018 MC28_4214 003920e09a93fc6bf2111e21dabafd79 123 Gene3D G3DSA:3.40.30.30 19 123 1.4E-38 T 14-10-2018 IPR038218 YuzD-like superfamily MC28_4214 003920e09a93fc6bf2111e21dabafd79 123 SUPERFAMILY SSF52833 21 122 1.44E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_4214 003920e09a93fc6bf2111e21dabafd79 123 PIRSF PIRSF010603 20 123 1.2E-47 T 14-10-2018 IPR009190 Protein of unknown function DUF1462 MC28_4214 003920e09a93fc6bf2111e21dabafd79 123 Pfam PF07315 Protein of unknown function (DUF1462) 27 120 5.5E-41 T 14-10-2018 IPR009190 Protein of unknown function DUF1462 MC28_1754 08de247bb621a1c8c40a68b48ec6c9bd 155 Pfam PF01966 HD domain 4 95 2.3E-8 T 14-10-2018 IPR006674 HD domain MC28_1754 08de247bb621a1c8c40a68b48ec6c9bd 155 Gene3D G3DSA:1.10.3210.10 1 152 2.9E-31 T 14-10-2018 MC28_1754 08de247bb621a1c8c40a68b48ec6c9bd 155 SUPERFAMILY SSF109604 3 119 1.84E-12 T 14-10-2018 MC28_2288 973e0b698f354bdcea4559ea2b59fe75 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 70 4.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2288 973e0b698f354bdcea4559ea2b59fe75 215 Gene3D G3DSA:1.10.357.10 17 203 3.8E-53 T 14-10-2018 MC28_2288 973e0b698f354bdcea4559ea2b59fe75 215 SUPERFAMILY SSF46689 18 82 6.16E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2288 973e0b698f354bdcea4559ea2b59fe75 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 8.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2288 973e0b698f354bdcea4559ea2b59fe75 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 8.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2288 973e0b698f354bdcea4559ea2b59fe75 215 Pfam PF14278 Transcriptional regulator C-terminal region 109 185 9.2E-21 T 14-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type MC28_2197 8436841313790ff77352114c440af755 135 Pfam PF12681 Glyoxalase-like domain 13 135 5.6E-43 T 14-10-2018 IPR025870 Glyoxalase-like domain MC28_2197 8436841313790ff77352114c440af755 135 SUPERFAMILY SSF54593 12 132 6.31E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2197 8436841313790ff77352114c440af755 135 Gene3D G3DSA:3.10.180.10 4 135 1.8E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3423 c06fb09bbf3a1451073f8ca86e1a3c33 408 Gene3D G3DSA:3.30.2330.10 195 279 9.4E-32 T 14-10-2018 MC28_3423 c06fb09bbf3a1451073f8ca86e1a3c33 408 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 14 408 2.9E-153 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 MC28_3423 c06fb09bbf3a1451073f8ca86e1a3c33 408 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 35 408 0.0 T 14-10-2018 MC28_3423 c06fb09bbf3a1451073f8ca86e1a3c33 408 SUPERFAMILY SSF56266 18 404 1.57E-138 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 MC28_3423 c06fb09bbf3a1451073f8ca86e1a3c33 408 Gene3D G3DSA:3.60.70.12 4 194 1.5E-70 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 MC28_3423 c06fb09bbf3a1451073f8ca86e1a3c33 408 Pfam PF01960 ArgJ family 25 408 5.0E-147 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 MC28_3423 c06fb09bbf3a1451073f8ca86e1a3c33 408 Gene3D G3DSA:3.10.20.340 280 408 2.7E-48 T 14-10-2018 MC28_3423 c06fb09bbf3a1451073f8ca86e1a3c33 408 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 408 141.484 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 MC28_4879 6b3bf92ee408aaf8d6d73120daba169c 322 Gene3D G3DSA:3.90.180.10 34 317 1.9E-91 T 14-10-2018 MC28_4879 6b3bf92ee408aaf8d6d73120daba169c 322 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 48 119 5.4E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_4879 6b3bf92ee408aaf8d6d73120daba169c 322 Pfam PF00107 Zinc-binding dehydrogenase 186 280 4.9E-15 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MC28_4879 6b3bf92ee408aaf8d6d73120daba169c 322 SUPERFAMILY SSF50129 21 181 2.89E-30 T 14-10-2018 IPR011032 GroES-like superfamily MC28_4879 6b3bf92ee408aaf8d6d73120daba169c 322 SUPERFAMILY SSF51735 147 296 8.57E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4879 6b3bf92ee408aaf8d6d73120daba169c 322 SMART SM00829 30 319 4.8E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_4879 6b3bf92ee408aaf8d6d73120daba169c 322 Gene3D G3DSA:3.40.50.720 165 271 1.9E-91 T 14-10-2018 MC28_2093 9408cb0edfcae2d491aa3f3749e669f7 290 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2093 9408cb0edfcae2d491aa3f3749e669f7 290 Pfam PF00005 ABC transporter 20 156 3.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2093 9408cb0edfcae2d491aa3f3749e669f7 290 SMART SM00382 28 206 4.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2093 9408cb0edfcae2d491aa3f3749e669f7 290 Gene3D G3DSA:3.40.50.300 2 230 1.6E-42 T 14-10-2018 MC28_2093 9408cb0edfcae2d491aa3f3749e669f7 290 SUPERFAMILY SSF52540 3 220 2.24E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0417 ddf8a5b67248f1949e65cfcf25421193 608 Gene3D G3DSA:1.10.287.830 187 233 6.3E-21 T 14-10-2018 MC28_0417 ddf8a5b67248f1949e65cfcf25421193 608 Pfam PF08439 Oligopeptidase F 120 189 9.7E-27 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain MC28_0417 ddf8a5b67248f1949e65cfcf25421193 608 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 13 602 1.8E-223 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 MC28_0417 ddf8a5b67248f1949e65cfcf25421193 608 Pfam PF01432 Peptidase family M3 211 591 9.9E-84 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 MC28_0417 ddf8a5b67248f1949e65cfcf25421193 608 SUPERFAMILY SSF55486 9 587 1.83E-142 T 14-10-2018 MC28_0417 ddf8a5b67248f1949e65cfcf25421193 608 Gene3D G3DSA:1.20.140.70 30 185 1.5E-59 T 14-10-2018 MC28_0417 ddf8a5b67248f1949e65cfcf25421193 608 Gene3D G3DSA:1.10.1370.20 234 607 4.2E-144 T 14-10-2018 MC28_F084 6e341516b4d7573a896a5af9dea81866 746 SUPERFAMILY SSF51055 699 741 1.19E-5 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_F084 6e341516b4d7573a896a5af9dea81866 746 Gene3D G3DSA:1.10.1740.210 170 301 9.2E-41 T 14-10-2018 MC28_F084 6e341516b4d7573a896a5af9dea81866 746 SMART SM00060 606 679 6.8E-9 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_F084 6e341516b4d7573a896a5af9dea81866 746 Pfam PF03272 Putative mucin or carbohydrate-binding module 477 590 6.1E-29 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_F084 6e341516b4d7573a896a5af9dea81866 746 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 165 425 5.6E-55 T 14-10-2018 IPR031161 Peptidase family M60 domain MC28_F084 6e341516b4d7573a896a5af9dea81866 746 Gene3D G3DSA:1.10.390.30 303 462 5.3E-55 T 14-10-2018 MC28_F084 6e341516b4d7573a896a5af9dea81866 746 Pfam PF17291 N-terminal domain of M60-like peptidases 80 153 1.4E-13 T 14-10-2018 IPR035423 M60-like domain, N-terminal MC28_F084 6e341516b4d7573a896a5af9dea81866 746 Gene3D G3DSA:2.60.40.10 604 685 1.7E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_F084 6e341516b4d7573a896a5af9dea81866 746 Gene3D G3DSA:2.10.10.20 686 739 1.1E-8 T 14-10-2018 MC28_F084 6e341516b4d7573a896a5af9dea81866 746 Gene3D G3DSA:2.60.120.1250 43 169 4.4E-48 T 14-10-2018 MC28_F084 6e341516b4d7573a896a5af9dea81866 746 SMART SM01276 82 375 4.8E-101 T 14-10-2018 IPR031161 Peptidase family M60 domain MC28_F084 6e341516b4d7573a896a5af9dea81866 746 SMART SM00495 697 743 2.5E-4 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_F084 6e341516b4d7573a896a5af9dea81866 746 SUPERFAMILY SSF49265 600 691 2.54E-14 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_4251 226cb9aac2f3362f8bb8d8220d658580 341 Pfam PF09383 NIL domain 265 337 3.5E-18 T 14-10-2018 IPR018449 NIL domain MC28_4251 226cb9aac2f3362f8bb8d8220d658580 341 Gene3D G3DSA:3.40.50.300 1 244 4.8E-76 T 14-10-2018 MC28_4251 226cb9aac2f3362f8bb8d8220d658580 341 Pfam PF00005 ABC transporter 22 169 1.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4251 226cb9aac2f3362f8bb8d8220d658580 341 SMART SM00930 263 338 7.1E-26 T 14-10-2018 IPR018449 NIL domain MC28_4251 226cb9aac2f3362f8bb8d8220d658580 341 SUPERFAMILY SSF55021 249 340 8.81E-21 T 14-10-2018 MC28_4251 226cb9aac2f3362f8bb8d8220d658580 341 SMART SM00382 30 218 6.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4251 226cb9aac2f3362f8bb8d8220d658580 341 SUPERFAMILY SSF52540 1 240 3.59E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4251 226cb9aac2f3362f8bb8d8220d658580 341 Gene3D G3DSA:3.30.70.260 245 341 1.5E-32 T 14-10-2018 MC28_4251 226cb9aac2f3362f8bb8d8220d658580 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2399 f13d9fbf51f57aa4e35c5ee1fd29025d 218 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 20 201 3.5E-20 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 MC28_2399 f13d9fbf51f57aa4e35c5ee1fd29025d 218 Gene3D G3DSA:3.40.50.300 15 212 1.8E-31 T 14-10-2018 MC28_2399 f13d9fbf51f57aa4e35c5ee1fd29025d 218 SUPERFAMILY SSF52540 20 202 4.59E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2399 f13d9fbf51f57aa4e35c5ee1fd29025d 218 PRINTS PR00988 Uridine kinase signature 187 200 3.2E-8 T 14-10-2018 MC28_2399 f13d9fbf51f57aa4e35c5ee1fd29025d 218 PRINTS PR00988 Uridine kinase signature 18 35 3.2E-8 T 14-10-2018 MC28_2399 f13d9fbf51f57aa4e35c5ee1fd29025d 218 PRINTS PR00988 Uridine kinase signature 152 162 3.2E-8 T 14-10-2018 MC28_1134 983849d49df74af42642a06226529db6 478 SUPERFAMILY SSF51905 23 477 9.06E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1134 983849d49df74af42642a06226529db6 478 Gene3D G3DSA:3.50.50.60 26 424 1.9E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1134 983849d49df74af42642a06226529db6 478 Pfam PF01593 Flavin containing amine oxidoreductase 34 475 1.7E-68 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 MC28_1134 983849d49df74af42642a06226529db6 478 Gene3D G3DSA:3.90.660.10 24 415 1.9E-96 T 14-10-2018 MC28_1134 983849d49df74af42642a06226529db6 478 PRINTS PR00757 Flavin-containing amine oxidase signature 457 474 1.0E-10 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_1134 983849d49df74af42642a06226529db6 478 PRINTS PR00757 Flavin-containing amine oxidase signature 26 45 1.0E-10 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_1134 983849d49df74af42642a06226529db6 478 PRINTS PR00757 Flavin-containing amine oxidase signature 320 339 1.0E-10 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_1134 983849d49df74af42642a06226529db6 478 PRINTS PR00757 Flavin-containing amine oxidase signature 407 426 1.0E-10 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_1134 983849d49df74af42642a06226529db6 478 Gene3D G3DSA:1.10.10.1620 432 478 6.6E-19 T 14-10-2018 MC28_1134 983849d49df74af42642a06226529db6 478 SUPERFAMILY SSF54373 316 426 4.06E-31 T 14-10-2018 MC28_1134 983849d49df74af42642a06226529db6 478 Gene3D G3DSA:1.10.405.10 122 225 1.9E-96 T 14-10-2018 MC28_2879 d48abd05a59cee2205c50b4ad59940db 309 Gene3D G3DSA:2.30.30.40 19 82 3.2E-15 T 14-10-2018 MC28_2879 d48abd05a59cee2205c50b4ad59940db 309 Pfam PF06725 3D domain 248 308 7.8E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 MC28_2879 d48abd05a59cee2205c50b4ad59940db 309 Gene3D G3DSA:2.30.30.40 83 142 2.2E-12 T 14-10-2018 MC28_2879 d48abd05a59cee2205c50b4ad59940db 309 SMART SM00287 85 144 4.8E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2879 d48abd05a59cee2205c50b4ad59940db 309 SMART SM00287 23 84 8.4E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2879 d48abd05a59cee2205c50b4ad59940db 309 SUPERFAMILY SSF50685 247 298 1.4E-10 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_2879 d48abd05a59cee2205c50b4ad59940db 309 Gene3D G3DSA:2.40.40.10 155 301 2.4E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_2879 d48abd05a59cee2205c50b4ad59940db 309 Pfam PF08239 Bacterial SH3 domain 91 138 1.7E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2879 d48abd05a59cee2205c50b4ad59940db 309 Pfam PF08239 Bacterial SH3 domain 32 80 8.6E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 Pfam PF13426 PAS domain 96 183 2.5E-7 T 14-10-2018 IPR000014 PAS domain MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 SUPERFAMILY SSF55874 252 414 4.98E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 Gene3D G3DSA:3.30.565.10 262 411 8.0E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 198 257 4.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 80 181 5.8E-7 T 14-10-2018 IPR000014 PAS domain MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 Gene3D G3DSA:1.10.287.130 200 257 3.3E-13 T 14-10-2018 MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 SMART SM00387 306 412 4.9E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 SMART SM00091 82 149 6.3E-4 T 14-10-2018 IPR000014 PAS domain MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 409 1.6E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 372 9.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 409 9.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 9.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 9.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 SUPERFAMILY SSF55785 78 182 1.03E-11 T 14-10-2018 IPR035965 PAS domain superfamily MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 SUPERFAMILY SSF47384 187 258 3.14E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 Gene3D G3DSA:3.30.450.20 76 183 3.5E-13 T 14-10-2018 MC28_0693 4bd1bd70f132e7c1fa8bd47c085918df 423 SMART SM00388 196 261 2.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4862 0fa58829054c4487d716a9a4b653a333 236 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 35 225 1.5E-84 T 14-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB MC28_4862 0fa58829054c4487d716a9a4b653a333 236 Gene3D G3DSA:3.20.20.370 29 236 1.2E-59 T 14-10-2018 MC28_4862 0fa58829054c4487d716a9a4b653a333 236 SUPERFAMILY SSF88713 5 225 1.49E-52 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_4862 0fa58829054c4487d716a9a4b653a333 236 Pfam PF01522 Polysaccharide deacetylase 34 157 2.2E-25 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_5023 60d65bec6fac993e8a857957a631e659 256 Pfam PF01925 Sulfite exporter TauE/SafE 12 245 6.1E-43 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 MC28_3749 369c04397866939f910a8f6c93df7581 433 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 44 67 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 MC28_3749 369c04397866939f910a8f6c93df7581 433 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 372 2.7E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 MC28_3749 369c04397866939f910a8f6c93df7581 433 SUPERFAMILY SSF53623 3 299 5.29E-95 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_3749 369c04397866939f910a8f6c93df7581 433 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 428 4.6E-127 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 MC28_3749 369c04397866939f910a8f6c93df7581 433 PIRSF PIRSF001563 1 433 1.4E-155 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 MC28_3749 369c04397866939f910a8f6c93df7581 433 Gene3D G3DSA:3.40.1190.10 3 299 8.5E-99 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_3749 369c04397866939f910a8f6c93df7581 433 Pfam PF08245 Mur ligase middle domain 47 273 4.9E-13 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 MC28_3749 369c04397866939f910a8f6c93df7581 433 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 MC28_3749 369c04397866939f910a8f6c93df7581 433 SUPERFAMILY SSF53244 301 431 1.45E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_3749 369c04397866939f910a8f6c93df7581 433 Gene3D G3DSA:3.90.190.20 301 433 4.4E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_D153 1cf3c9cdd6942346b8d65c75013b0059 204 SUPERFAMILY SSF53041 4 153 9.02E-33 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_D153 1cf3c9cdd6942346b8d65c75013b0059 204 Pfam PF00239 Resolvase, N terminal domain 6 153 1.4E-27 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_D153 1cf3c9cdd6942346b8d65c75013b0059 204 SMART SM00857 5 153 4.6E-34 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_D153 1cf3c9cdd6942346b8d65c75013b0059 204 Gene3D G3DSA:3.40.50.1390 6 154 3.8E-31 T 14-10-2018 MC28_D153 1cf3c9cdd6942346b8d65c75013b0059 204 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_D153 1cf3c9cdd6942346b8d65c75013b0059 204 ProSitePatterns PS00398 Site-specific recombinases signature 2. 60 72 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 SMART SM00260 517 661 1.5E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Gene3D G3DSA:3.30.70.1110 143 226 4.7E-18 T 14-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Gene3D G3DSA:2.40.50.180 548 616 4.8E-36 T 14-10-2018 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 SMART SM01231 277 337 6.7E-11 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 SMART SM00073 2 99 7.1E-33 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Gene3D G3DSA:1.20.120.160 2 136 4.9E-37 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 SUPERFAMILY SSF47226 3 113 1.24E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 SUPERFAMILY SSF50341 524 661 1.44E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Pfam PF01584 CheW-like domain 530 661 8.9E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Gene3D G3DSA:3.30.565.10 338 524 9.3E-61 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Gene3D G3DSA:2.30.30.40 525 657 4.8E-36 T 14-10-2018 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 SUPERFAMILY SSF55874 339 523 1.13E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 SUPERFAMILY SSF55052 147 225 2.51E-19 T 14-10-2018 IPR035891 CheY-binding domain of CheA MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 SMART SM00387 382 525 3.1E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 503 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 441 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 479 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 278 335 5.8E-7 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Gene3D G3DSA:1.10.287.560 277 337 7.4E-12 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Pfam PF01627 Hpt domain 4 103 2.5E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 385 524 7.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 Pfam PF07194 P2 response regulator binding domain 148 225 9.4E-20 T 14-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 MC28_0876 cf5e4fc3589dce5efb189214e179cc20 661 SUPERFAMILY SSF47384 278 338 4.32E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_1625 e221d57ce09be3e5f66095d58593dae5 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 3.9E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1625 e221d57ce09be3e5f66095d58593dae5 209 Gene3D G3DSA:1.10.357.10 70 208 1.1E-13 T 14-10-2018 MC28_1625 e221d57ce09be3e5f66095d58593dae5 209 Gene3D G3DSA:1.10.10.60 11 69 1.3E-16 T 14-10-2018 MC28_1625 e221d57ce09be3e5f66095d58593dae5 209 SUPERFAMILY SSF48498 123 206 1.11E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_1625 e221d57ce09be3e5f66095d58593dae5 209 SUPERFAMILY SSF46689 14 98 2.05E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1625 e221d57ce09be3e5f66095d58593dae5 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 2.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1625 e221d57ce09be3e5f66095d58593dae5 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 2.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1281 3ad5b6e75eadf26f19563228a546e860 148 PRINTS PR00502 NUDIX hydrolase family signature 36 50 2.5E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_1281 3ad5b6e75eadf26f19563228a546e860 148 PRINTS PR00502 NUDIX hydrolase family signature 50 65 2.5E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_1281 3ad5b6e75eadf26f19563228a546e860 148 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_1281 3ad5b6e75eadf26f19563228a546e860 148 Pfam PF00293 NUDIX domain 6 139 2.0E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_1281 3ad5b6e75eadf26f19563228a546e860 148 Gene3D G3DSA:3.90.79.10 2 139 8.3E-18 T 14-10-2018 MC28_1281 3ad5b6e75eadf26f19563228a546e860 148 SUPERFAMILY SSF55811 6 132 8.94E-18 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_2529 503142da80054c38ea1a7c135f5cb175 199 Gene3D G3DSA:3.40.109.10 2 199 1.1E-89 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_2529 503142da80054c38ea1a7c135f5cb175 199 Pfam PF00881 Nitroreductase family 10 177 6.6E-16 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_2529 503142da80054c38ea1a7c135f5cb175 199 SUPERFAMILY SSF55469 4 197 2.75E-72 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 297 310 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 49 324 65.148 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 Pfam PF02881 SRP54-type protein, helical bundle domain 37 102 6.5E-15 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 SUPERFAMILY SSF52540 120 322 7.76E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3070 e571a9ed4f480742a51f745c11a92512 332 SUPERFAMILY SSF47364 21 99 2.36E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 SMART SM00382 122 300 2.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3070 e571a9ed4f480742a51f745c11a92512 332 Gene3D G3DSA:3.40.50.300 115 312 3.7E-117 T 14-10-2018 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 Gene3D G3DSA:1.20.120.140 23 321 3.7E-117 T 14-10-2018 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 49 323 5.0E-119 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 Pfam PF00448 SRP54-type protein, GTPase domain 124 323 4.7E-82 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 SMART SM00962 123 324 4.9E-124 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_3070 e571a9ed4f480742a51f745c11a92512 332 SMART SM00963 25 106 2.6E-25 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 Pfam PF00318 Ribosomal protein S2 4 219 3.6E-102 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 SUPERFAMILY SSF52313 1 222 3.4E-100 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily MC28_3050 926cfa2196a55082150a2e073bd31a17 228 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 153 177 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 41.98 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 Gene3D G3DSA:1.10.287.610 92 147 1.2E-95 T 14-10-2018 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 221 5.1E-112 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 PRINTS PR00395 Ribosomal protein S2 signature 32 41 1.8E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 PRINTS PR00395 Ribosomal protein S2 signature 170 181 1.8E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 PRINTS PR00395 Ribosomal protein S2 signature 1 19 1.8E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 PRINTS PR00395 Ribosomal protein S2 signature 82 99 1.8E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 PRINTS PR00395 Ribosomal protein S2 signature 191 205 1.8E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 PRINTS PR00395 Ribosomal protein S2 signature 153 170 1.8E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 Gene3D G3DSA:3.40.50.10490 5 210 1.2E-95 T 14-10-2018 MC28_3050 926cfa2196a55082150a2e073bd31a17 228 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 1 12 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 MC28_1616 f0637be526f7e38e307710b171794fa8 748 Pfam PF13426 PAS domain 423 516 4.5E-7 T 14-10-2018 IPR000014 PAS domain MC28_1616 f0637be526f7e38e307710b171794fa8 748 Gene3D G3DSA:3.30.450.20 386 515 1.4E-21 T 14-10-2018 MC28_1616 f0637be526f7e38e307710b171794fa8 748 SUPERFAMILY SSF47384 525 593 1.92E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_1616 f0637be526f7e38e307710b171794fa8 748 SMART SM00388 532 596 5.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1616 f0637be526f7e38e307710b171794fa8 748 SUPERFAMILY SSF55785 388 515 4.35E-18 T 14-10-2018 IPR035965 PAS domain superfamily MC28_1616 f0637be526f7e38e307710b171794fa8 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 704 5.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1616 f0637be526f7e38e307710b171794fa8 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 705 723 5.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1616 f0637be526f7e38e307710b171794fa8 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 729 742 5.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1616 f0637be526f7e38e307710b171794fa8 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 690 5.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1616 f0637be526f7e38e307710b171794fa8 748 SUPERFAMILY SSF55785 252 377 7.4E-24 T 14-10-2018 IPR035965 PAS domain superfamily MC28_1616 f0637be526f7e38e307710b171794fa8 748 SMART SM00091 268 333 4.6E-6 T 14-10-2018 IPR000014 PAS domain MC28_1616 f0637be526f7e38e307710b171794fa8 748 SMART SM00091 401 474 0.068 T 14-10-2018 IPR000014 PAS domain MC28_1616 f0637be526f7e38e307710b171794fa8 748 SMART SM00086 216 256 310.0 T 14-10-2018 IPR001610 PAC motif MC28_1616 f0637be526f7e38e307710b171794fa8 748 SMART SM00086 477 517 6.7 T 14-10-2018 IPR001610 PAC motif MC28_1616 f0637be526f7e38e307710b171794fa8 748 SMART SM00086 340 382 1.2E-4 T 14-10-2018 IPR001610 PAC motif MC28_1616 f0637be526f7e38e307710b171794fa8 748 SMART SM00387 638 745 2.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1616 f0637be526f7e38e307710b171794fa8 748 Gene3D G3DSA:3.30.450.20 264 385 1.1E-26 T 14-10-2018 MC28_1616 f0637be526f7e38e307710b171794fa8 748 Gene3D G3DSA:3.30.450.20 173 263 4.0E-12 T 14-10-2018 MC28_1616 f0637be526f7e38e307710b171794fa8 748 Pfam PF08448 PAS fold 177 257 4.5E-6 T 14-10-2018 IPR013656 PAS fold-4 MC28_1616 f0637be526f7e38e307710b171794fa8 748 Pfam PF08448 PAS fold 278 384 1.1E-16 T 14-10-2018 IPR013656 PAS fold-4 MC28_1616 f0637be526f7e38e307710b171794fa8 748 Gene3D G3DSA:3.30.565.10 596 746 4.4E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1616 f0637be526f7e38e307710b171794fa8 748 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 641 742 2.9E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1616 f0637be526f7e38e307710b171794fa8 748 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 388 6.0E-27 T 14-10-2018 IPR000014 PAS domain MC28_1616 f0637be526f7e38e307710b171794fa8 748 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 397 523 2.9E-17 T 14-10-2018 IPR000014 PAS domain MC28_1616 f0637be526f7e38e307710b171794fa8 748 SUPERFAMILY SSF55785 164 264 1.42E-7 T 14-10-2018 IPR035965 PAS domain superfamily MC28_1616 f0637be526f7e38e307710b171794fa8 748 Gene3D G3DSA:1.10.287.130 518 595 2.1E-18 T 14-10-2018 MC28_1616 f0637be526f7e38e307710b171794fa8 748 SUPERFAMILY SSF55874 593 743 1.83E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1616 f0637be526f7e38e307710b171794fa8 748 Pfam PF00512 His Kinase A (phospho-acceptor) domain 534 592 1.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2622 fa33d41d85651840de1e3eb4a834bf1a 268 Pfam PF01032 FecCD transport family 1 266 4.4E-79 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_2622 fa33d41d85651840de1e3eb4a834bf1a 268 SUPERFAMILY SSF81345 1 266 4.45E-70 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_2622 fa33d41d85651840de1e3eb4a834bf1a 268 Gene3D G3DSA:1.10.3470.10 1 268 3.8E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3082 258469f8031ac7f8c6afe1c270093638 226 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 156 219 6.4E-19 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 MC28_3082 258469f8031ac7f8c6afe1c270093638 226 SUPERFAMILY SSF63999 11 142 1.24E-33 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 MC28_3082 258469f8031ac7f8c6afe1c270093638 226 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 34 140 1.2E-20 T 14-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 MC28_3082 258469f8031ac7f8c6afe1c270093638 226 SUPERFAMILY SSF63862 146 224 8.5E-16 T 14-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 MC28_3082 258469f8031ac7f8c6afe1c270093638 226 Gene3D G3DSA:3.40.50.10240 14 226 2.0E-75 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 MC28_3082 258469f8031ac7f8c6afe1c270093638 226 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 17 222 7.4E-61 T 14-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 MC28_3082 258469f8031ac7f8c6afe1c270093638 226 SMART SM00983 154 220 7.1E-24 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 MC28_0539 23dcd59e3b04e6696113e9715bd21e23 432 Pfam PF02386 Cation transport protein 14 416 1.3E-58 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 MC28_0539 23dcd59e3b04e6696113e9715bd21e23 432 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 21 403 7.1E-110 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 MC28_2969 294012d1ac1827a00013265b928c124a 413 ProSitePatterns PS00324 Aspartokinase signature. 8 16 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_2969 294012d1ac1827a00013265b928c124a 413 Gene3D G3DSA:3.40.1160.10 4 257 1.1E-83 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_2969 294012d1ac1827a00013265b928c124a 413 SUPERFAMILY SSF55021 263 349 2.06E-14 T 14-10-2018 MC28_2969 294012d1ac1827a00013265b928c124a 413 Gene3D G3DSA:3.30.2130.10 258 412 3.1E-37 T 14-10-2018 MC28_2969 294012d1ac1827a00013265b928c124a 413 Pfam PF00696 Amino acid kinase family 5 238 1.3E-46 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 MC28_2969 294012d1ac1827a00013265b928c124a 413 SUPERFAMILY SSF53633 6 248 1.31E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_2969 294012d1ac1827a00013265b928c124a 413 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 61 404 3.7E-95 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_2969 294012d1ac1827a00013265b928c124a 413 PIRSF PIRSF000726 64 412 1.1E-94 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_2969 294012d1ac1827a00013265b928c124a 413 PIRSF PIRSF000726 4 68 1.8E-9 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_2969 294012d1ac1827a00013265b928c124a 413 Pfam PF13840 ACT domain 339 401 2.4E-22 T 14-10-2018 IPR027795 CASTOR, ACT domain MC28_2969 294012d1ac1827a00013265b928c124a 413 SUPERFAMILY SSF55021 338 407 4.58E-17 T 14-10-2018 MC28_2969 294012d1ac1827a00013265b928c124a 413 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 405 2.4E-138 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 9.6E-90 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 245 3.0E-68 T 14-10-2018 MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 SUPERFAMILY SSF51735 5 245 6.32E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 Gene3D G3DSA:3.40.50.720 4 246 8.1E-84 T 14-10-2018 MC28_F184 7a025a02d7c570d57ca9f754aab25f2c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_0401 6d68adba1f32f3c326abb120f6ec5084 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 469 1.8E-77 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_0401 6d68adba1f32f3c326abb120f6ec5084 551 Gene3D G3DSA:3.90.76.10 77 199 3.0E-173 T 14-10-2018 MC28_0401 6d68adba1f32f3c326abb120f6ec5084 551 PIRSF PIRSF002741 1 551 1.9E-99 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_0401 6d68adba1f32f3c326abb120f6ec5084 551 Gene3D G3DSA:3.40.190.10 58 533 3.0E-173 T 14-10-2018 MC28_0401 6d68adba1f32f3c326abb120f6ec5084 551 Gene3D G3DSA:3.10.105.10 299 521 3.0E-173 T 14-10-2018 MC28_0401 6d68adba1f32f3c326abb120f6ec5084 551 SUPERFAMILY SSF53850 39 545 1.77E-118 T 14-10-2018 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 SUPERFAMILY SSF54570 3 83 9.02E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.013 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 8.0E-47 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 PIRSF PIRSF002144 1 92 3.7E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.3E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.3E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.3E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 Pfam PF00203 Ribosomal protein S19 3 83 4.0E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4826 1905e41a7c02e04d00ea435ec0fe19c1 92 Gene3D G3DSA:3.30.860.10 1 92 1.3E-40 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4903 94817f5979465e7c3d4df97a7b53c01d 288 Gene3D G3DSA:3.40.190.290 90 286 2.6E-35 T 14-10-2018 MC28_4903 94817f5979465e7c3d4df97a7b53c01d 288 SUPERFAMILY SSF53850 88 282 2.41E-33 T 14-10-2018 MC28_4903 94817f5979465e7c3d4df97a7b53c01d 288 SUPERFAMILY SSF46785 1 101 2.97E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4903 94817f5979465e7c3d4df97a7b53c01d 288 Pfam PF03466 LysR substrate binding domain 86 282 1.9E-39 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_4903 94817f5979465e7c3d4df97a7b53c01d 288 Gene3D G3DSA:1.10.10.10 1 88 4.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4903 94817f5979465e7c3d4df97a7b53c01d 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_0377 3829c0054ea091f3dda93fefd1a3ff88 163 Gene3D G3DSA:3.30.70.990 12 101 7.5E-63 T 14-10-2018 IPR035570 UPF0234, N-terminal MC28_0377 3829c0054ea091f3dda93fefd1a3ff88 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 26.975 T 14-10-2018 IPR007551 Protein of unknown function DUF520 MC28_0377 3829c0054ea091f3dda93fefd1a3ff88 163 SUPERFAMILY SSF89963 91 163 1.41E-25 T 14-10-2018 IPR036183 YajQ-like superfamily MC28_0377 3829c0054ea091f3dda93fefd1a3ff88 163 Gene3D G3DSA:3.30.70.860 6 163 7.5E-63 T 14-10-2018 IPR035571 UPF0234-like, C-terminal MC28_0377 3829c0054ea091f3dda93fefd1a3ff88 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 1.8E-62 T 14-10-2018 IPR007551 Protein of unknown function DUF520 MC28_0377 3829c0054ea091f3dda93fefd1a3ff88 163 SUPERFAMILY SSF89963 6 90 1.07E-30 T 14-10-2018 IPR036183 YajQ-like superfamily MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 SUPERFAMILY SSF51735 2 177 3.68E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 345 2.4E-138 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 Gene3D G3DSA:3.30.360.10 147 313 7.7E-127 T 14-10-2018 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 141 4.3E-34 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 SMART SM00859 2 141 3.8E-50 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 PIRSF PIRSF000148 130 333 2.7E-17 T 14-10-2018 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 PIRSF PIRSF000148 1 108 7.9E-15 T 14-10-2018 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 Gene3D G3DSA:3.40.50.720 2 331 7.7E-127 T 14-10-2018 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 316 4.9E-29 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 SUPERFAMILY SSF55347 149 313 1.26E-53 T 14-10-2018 MC28_3424 42e40de57ccceae3e8ef032b2f8d1546 345 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 339 43.988 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 MC28_3166 030fb96e015adc36167afbed2d6f49b5 145 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 6 143 9.2E-33 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component MC28_3166 030fb96e015adc36167afbed2d6f49b5 145 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 12 104 6.9E-5 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component MC28_G150 78c455275a5d71bcd4db44937d9cb58f 184 Gene3D G3DSA:1.10.260.40 2 72 1.7E-15 T 14-10-2018 MC28_G150 78c455275a5d71bcd4db44937d9cb58f 184 SMART SM00530 9 64 3.7E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G150 78c455275a5d71bcd4db44937d9cb58f 184 SUPERFAMILY SSF51182 57 184 5.57E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_G150 78c455275a5d71bcd4db44937d9cb58f 184 Pfam PF07883 Cupin domain 109 176 2.5E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_G150 78c455275a5d71bcd4db44937d9cb58f 184 SUPERFAMILY SSF47413 2 71 1.37E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_G150 78c455275a5d71bcd4db44937d9cb58f 184 Pfam PF01381 Helix-turn-helix 10 61 2.8E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G150 78c455275a5d71bcd4db44937d9cb58f 184 Gene3D G3DSA:2.60.120.10 73 179 2.8E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_0461 f2c2f92a07a157177fe9fbc6ec0ebaaf 253 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 251 33.041 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 MC28_0461 f2c2f92a07a157177fe9fbc6ec0ebaaf 253 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 246 1.3E-82 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 MC28_0461 f2c2f92a07a157177fe9fbc6ec0ebaaf 253 SUPERFAMILY SSF51366 3 248 1.77E-75 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 MC28_0461 f2c2f92a07a157177fe9fbc6ec0ebaaf 253 Gene3D G3DSA:3.20.20.70 1 251 9.9E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0461 f2c2f92a07a157177fe9fbc6ec0ebaaf 253 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 44 62 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 MC28_4442 803ca60934f3730af729a0d210e15e6f 107 Gene3D G3DSA:1.20.58.280 1 106 1.5E-44 T 14-10-2018 MC28_4442 803ca60934f3730af729a0d210e15e6f 107 SUPERFAMILY SSF46973 1 101 1.07E-37 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 MC28_4442 803ca60934f3730af729a0d210e15e6f 107 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 8 100 3.5E-37 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 MC28_4442 803ca60934f3730af729a0d210e15e6f 107 PIRSF PIRSF000699 1 107 3.2E-41 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 MC28_4098 40dab6e88dca7d150c7f91ea231cd43c 229 SMART SM00448 3 113 7.5E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4098 40dab6e88dca7d150c7f91ea231cd43c 229 SMART SM00862 152 225 1.4E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4098 40dab6e88dca7d150c7f91ea231cd43c 229 Gene3D G3DSA:1.10.10.10 137 228 4.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4098 40dab6e88dca7d150c7f91ea231cd43c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 225 1.0E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4098 40dab6e88dca7d150c7f91ea231cd43c 229 Gene3D G3DSA:3.40.50.2300 1 136 1.7E-38 T 14-10-2018 MC28_4098 40dab6e88dca7d150c7f91ea231cd43c 229 SUPERFAMILY SSF52172 3 179 9.23E-41 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4098 40dab6e88dca7d150c7f91ea231cd43c 229 Pfam PF00072 Response regulator receiver domain 5 112 3.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2125 088ce888c52d9ad7b5091fbe26b396af 315 Gene3D G3DSA:3.40.50.1100 13 301 1.5E-66 T 14-10-2018 MC28_2125 088ce888c52d9ad7b5091fbe26b396af 315 SUPERFAMILY SSF53686 6 302 6.42E-60 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_2125 088ce888c52d9ad7b5091fbe26b396af 315 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 298 1.2E-41 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_2125 088ce888c52d9ad7b5091fbe26b396af 315 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 MC28_2125 088ce888c52d9ad7b5091fbe26b396af 315 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 36 49 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 MC28_2125 088ce888c52d9ad7b5091fbe26b396af 315 Gene3D G3DSA:3.40.50.1100 46 145 1.5E-66 T 14-10-2018 MC28_0239 9964decde0a54f5f5e684d9c5c8f9a40 380 SUPERFAMILY SSF52172 2 156 2.56E-36 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0239 9964decde0a54f5f5e684d9c5c8f9a40 380 SMART SM00448 1 122 4.4E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0239 9964decde0a54f5f5e684d9c5c8f9a40 380 Gene3D G3DSA:3.60.40.10 134 378 5.3E-52 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_0239 9964decde0a54f5f5e684d9c5c8f9a40 380 SMART SM00331 163 377 2.2E-25 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_0239 9964decde0a54f5f5e684d9c5c8f9a40 380 Gene3D G3DSA:3.40.50.2300 1 132 2.6E-38 T 14-10-2018 MC28_0239 9964decde0a54f5f5e684d9c5c8f9a40 380 SUPERFAMILY SSF81606 179 376 7.85E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_0239 9964decde0a54f5f5e684d9c5c8f9a40 380 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 190 377 2.3E-39 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_0239 9964decde0a54f5f5e684d9c5c8f9a40 380 Pfam PF00072 Response regulator receiver domain 3 122 8.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5266 eecdcc70eb14de81e9cd32eced275016 162 Pfam PF00293 NUDIX domain 17 121 7.5E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_5266 eecdcc70eb14de81e9cd32eced275016 162 PRINTS PR00502 NUDIX hydrolase family signature 44 58 2.0E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_5266 eecdcc70eb14de81e9cd32eced275016 162 PRINTS PR00502 NUDIX hydrolase family signature 58 73 2.0E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_5266 eecdcc70eb14de81e9cd32eced275016 162 Gene3D G3DSA:3.90.79.10 12 146 8.7E-29 T 14-10-2018 MC28_5266 eecdcc70eb14de81e9cd32eced275016 162 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_5266 eecdcc70eb14de81e9cd32eced275016 162 SUPERFAMILY SSF55811 8 149 6.23E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_3862 a871048e87b59e33c781895b01ddbb08 200 SUPERFAMILY SSF52540 1 195 2.62E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3862 a871048e87b59e33c781895b01ddbb08 200 Gene3D G3DSA:3.40.50.300 1 198 6.8E-80 T 14-10-2018 MC28_3862 a871048e87b59e33c781895b01ddbb08 200 Pfam PF01121 Dephospho-CoA kinase 4 182 5.6E-69 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 MC28_3862 a871048e87b59e33c781895b01ddbb08 200 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 29.709 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 MC28_3862 a871048e87b59e33c781895b01ddbb08 200 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 4.1E-69 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 MC28_0969 8b90c3f1cd015405cf69f5f3de83a23f 135 Pfam PF13078 Protein of unknown function (DUF3942) 8 132 6.8E-63 T 14-10-2018 IPR025074 Protein of unknown function DUF3942 MC28_1166 6317b6579232db42a7ca623914e9de5a 290 SUPERFAMILY SSF81631 137 281 7.85E-56 T 14-10-2018 MC28_1166 6317b6579232db42a7ca623914e9de5a 290 PIRSF PIRSF000812 1 285 1.2E-121 T 14-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase MC28_1166 6317b6579232db42a7ca623914e9de5a 290 Gene3D G3DSA:3.30.460.10 9 148 1.3E-56 T 14-10-2018 MC28_1166 6317b6579232db42a7ca623914e9de5a 290 Pfam PF04439 Streptomycin adenylyltransferase 1 278 2.1E-127 T 14-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase MC28_1166 6317b6579232db42a7ca623914e9de5a 290 SUPERFAMILY SSF81301 1 134 7.52E-50 T 14-10-2018 MC28_1166 6317b6579232db42a7ca623914e9de5a 290 Gene3D G3DSA:1.20.120.330 149 288 3.6E-48 T 14-10-2018 MC28_D169 43c92e8fae05a324f16b178a9139beaa 201 SUPERFAMILY SSF53041 1 145 1.57E-35 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_D169 43c92e8fae05a324f16b178a9139beaa 201 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_D169 43c92e8fae05a324f16b178a9139beaa 201 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_D169 43c92e8fae05a324f16b178a9139beaa 201 Pfam PF00239 Resolvase, N terminal domain 3 145 5.4E-32 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_D169 43c92e8fae05a324f16b178a9139beaa 201 Pfam PF02796 Helix-turn-helix domain of resolvase 147 198 7.8E-15 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 MC28_D169 43c92e8fae05a324f16b178a9139beaa 201 Gene3D G3DSA:1.10.10.60 146 201 1.8E-24 T 14-10-2018 MC28_D169 43c92e8fae05a324f16b178a9139beaa 201 Gene3D G3DSA:3.40.50.1390 3 128 1.2E-37 T 14-10-2018 MC28_D169 43c92e8fae05a324f16b178a9139beaa 201 SMART SM00857 2 145 2.8E-40 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_4185 279fdea7685c027b193eeec2b89ce911 225 Gene3D G3DSA:3.90.640.20 130 225 2.5E-26 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily MC28_4185 279fdea7685c027b193eeec2b89ce911 225 Pfam PF11738 Protein of unknown function (DUF3298) 132 206 2.5E-18 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 MC28_4185 279fdea7685c027b193eeec2b89ce911 225 Pfam PF13739 Domain of unknown function (DUF4163) 18 113 2.3E-23 T 14-10-2018 IPR025303 Deacetylase PdaC MC28_4185 279fdea7685c027b193eeec2b89ce911 225 Gene3D G3DSA:3.30.565.40 9 128 1.5E-26 T 14-10-2018 MC28_3699 15dd415231da86746b37595b815fda58 727 SUPERFAMILY SSF81271 381 453 7.36E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 MC28_3699 15dd415231da86746b37595b815fda58 727 Pfam PF02824 TGS domain 394 453 2.7E-20 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 MC28_3699 15dd415231da86746b37595b815fda58 727 SMART SM00954 240 350 4.5E-69 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 MC28_3699 15dd415231da86746b37595b815fda58 727 SUPERFAMILY SSF81301 185 398 1.8E-67 T 14-10-2018 MC28_3699 15dd415231da86746b37595b815fda58 727 Pfam PF13291 ACT domain 649 724 1.4E-20 T 14-10-2018 IPR002912 ACT domain MC28_3699 15dd415231da86746b37595b815fda58 727 Gene3D G3DSA:3.10.20.30 387 459 6.7E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_3699 15dd415231da86746b37595b815fda58 727 SUPERFAMILY SSF109604 10 196 2.86E-77 T 14-10-2018 MC28_3699 15dd415231da86746b37595b815fda58 727 Gene3D G3DSA:3.30.70.260 648 727 1.3E-16 T 14-10-2018 MC28_3699 15dd415231da86746b37595b815fda58 727 SMART SM00471 46 158 1.3E-8 T 14-10-2018 IPR003607 HD/PDEase domain MC28_3699 15dd415231da86746b37595b815fda58 727 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 1.3E-39 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 MC28_3699 15dd415231da86746b37595b815fda58 727 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 724 1.8E-259 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 MC28_3699 15dd415231da86746b37595b815fda58 727 Pfam PF13328 HD domain 31 180 1.0E-52 T 14-10-2018 IPR003607 HD/PDEase domain MC28_3699 15dd415231da86746b37595b815fda58 727 SUPERFAMILY SSF55021 648 726 9.67E-11 T 14-10-2018 MC28_3699 15dd415231da86746b37595b815fda58 727 Gene3D G3DSA:1.10.3210.10 1 196 9.5E-89 T 14-10-2018 MC28_3699 15dd415231da86746b37595b815fda58 727 Gene3D G3DSA:3.30.460.10 198 330 2.1E-54 T 14-10-2018 MC28_1148 604d90356cf0ac8cff5b30574dffd157 338 PIRSF PIRSF000267 1 338 4.7E-113 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MC28_1148 604d90356cf0ac8cff5b30574dffd157 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 226 2.4E-85 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MC28_1148 604d90356cf0ac8cff5b30574dffd157 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 326 2.8E-104 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MC28_4141 7fa4a552cc9a253ae212d7170889f8f4 368 SUPERFAMILY SSF51604 117 359 3.93E-60 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily MC28_4141 7fa4a552cc9a253ae212d7170889f8f4 368 Gene3D G3DSA:3.30.390.10 6 116 7.7E-129 T 14-10-2018 IPR029017 Enolase-like, N-terminal MC28_4141 7fa4a552cc9a253ae212d7170889f8f4 368 SMART SM00922 142 234 8.9E-20 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal MC28_4141 7fa4a552cc9a253ae212d7170889f8f4 368 Gene3D G3DSA:3.20.20.120 117 344 7.7E-129 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily MC28_4141 7fa4a552cc9a253ae212d7170889f8f4 368 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 9 332 1.1E-122 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 MC28_4141 7fa4a552cc9a253ae212d7170889f8f4 368 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 359 44.473 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 MC28_4141 7fa4a552cc9a253ae212d7170889f8f4 368 SUPERFAMILY SSF54826 2 126 3.86E-34 T 14-10-2018 MC28_4141 7fa4a552cc9a253ae212d7170889f8f4 368 Pfam PF13378 Enolase C-terminal domain-like 145 343 1.8E-40 T 14-10-2018 IPR029065 Enolase C-terminal domain-like MC28_4141 7fa4a552cc9a253ae212d7170889f8f4 368 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 125 3.1E-14 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain MC28_3742 09632673046b168f14d516ab5934f055 181 Pfam PF04093 rod shape-determining protein MreD 7 166 2.6E-25 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 MC28_3742 09632673046b168f14d516ab5934f055 181 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 11 163 1.2E-27 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 MC28_4125 cfa74095c26402cf03d2205dd00782f2 231 SMART SM00862 149 225 3.9E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4125 cfa74095c26402cf03d2205dd00782f2 231 SUPERFAMILY SSF46894 128 227 9.92E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_4125 cfa74095c26402cf03d2205dd00782f2 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 4.2E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4125 cfa74095c26402cf03d2205dd00782f2 231 SUPERFAMILY SSF52172 1 123 5.55E-34 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4125 cfa74095c26402cf03d2205dd00782f2 231 Gene3D G3DSA:3.40.50.2300 2 121 5.1E-31 T 14-10-2018 MC28_4125 cfa74095c26402cf03d2205dd00782f2 231 Pfam PF00072 Response regulator receiver domain 4 112 3.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4125 cfa74095c26402cf03d2205dd00782f2 231 SMART SM00448 2 112 2.0E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4125 cfa74095c26402cf03d2205dd00782f2 231 Gene3D G3DSA:1.10.10.10 124 228 3.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1573 76a0bb8187f41d18984f8350c231444e 400 SUPERFAMILY SSF103473 8 394 3.27E-50 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1573 76a0bb8187f41d18984f8350c231444e 400 Pfam PF07690 Major Facilitator Superfamily 217 395 4.7E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1573 76a0bb8187f41d18984f8350c231444e 400 Gene3D G3DSA:1.20.1250.20 2 396 8.5E-47 T 14-10-2018 MC28_F056 f0b24007d2bf0e84047958d74a0edae9 237 SUPERFAMILY SSF46785 157 236 7.11E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_F056 f0b24007d2bf0e84047958d74a0edae9 237 Pfam PF13545 Crp-like helix-turn-helix domain 160 232 8.7E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_F056 f0b24007d2bf0e84047958d74a0edae9 237 Pfam PF00027 Cyclic nucleotide-binding domain 39 127 2.1E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_F056 f0b24007d2bf0e84047958d74a0edae9 237 Gene3D G3DSA:2.60.120.1460 24 235 1.6E-61 T 14-10-2018 MC28_F056 f0b24007d2bf0e84047958d74a0edae9 237 SUPERFAMILY SSF51206 16 154 1.44E-35 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like MC28_F056 f0b24007d2bf0e84047958d74a0edae9 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 200 215 5.5E-9 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_F056 f0b24007d2bf0e84047958d74a0edae9 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 200 5.5E-9 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_F056 f0b24007d2bf0e84047958d74a0edae9 237 SMART SM00100 20 142 2.3E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_F056 f0b24007d2bf0e84047958d74a0edae9 237 SMART SM00419 178 227 3.5E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 Pfam PF00158 Sigma-54 interaction domain 83 244 4.3E-45 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 SUPERFAMILY SSF63520 792 885 2.49E-16 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 Gene3D G3DSA:1.10.1790.10 791 887 6.7E-9 T 14-10-2018 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 Gene3D G3DSA:1.10.1790.10 433 530 8.6E-25 T 14-10-2018 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 SMART SM00382 103 252 5.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 SUPERFAMILY SSF46785 16 61 2.61E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 SUPERFAMILY SSF63520 428 528 1.44E-23 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 SUPERFAMILY SSF52540 98 322 1.16E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 175 190 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 Gene3D G3DSA:3.40.50.300 68 255 1.4E-39 T 14-10-2018 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 Gene3D G3DSA:3.40.50.510 535 668 2.4E-37 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 Pfam PF00874 PRD domain 799 884 8.2E-15 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 Pfam PF00874 PRD domain 442 528 1.0E-21 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 SUPERFAMILY SSF53062 539 660 5.76E-20 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 MC28_4437 b78bf9d10ee88fe2ec9a89fa12f303ac 891 Pfam PF03610 PTS system fructose IIA component 541 653 6.3E-8 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 MC28_0046 5d754ac8d7c3664b6308d3098b3cda79 194 Pfam PF11579 Protein of unknown function (DUF3238) 1 192 2.9E-111 T 14-10-2018 IPR021631 Protein of unknown function DUF3238 MC28_3052 f1aae9eb20b2325dd1b9960d491a3d72 463 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 137 3.0E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_3052 f1aae9eb20b2325dd1b9960d491a3d72 463 Gene3D G3DSA:1.10.8.60 355 460 1.2E-39 T 14-10-2018 MC28_3052 f1aae9eb20b2325dd1b9960d491a3d72 463 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 6 463 4.8E-210 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 MC28_3052 f1aae9eb20b2325dd1b9960d491a3d72 463 SMART SM00382 50 352 9.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3052 f1aae9eb20b2325dd1b9960d491a3d72 463 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 355 425 5.4E-7 T 14-10-2018 IPR019489 Clp ATPase, C-terminal MC28_3052 f1aae9eb20b2325dd1b9960d491a3d72 463 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 2 463 43.675 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 MC28_3052 f1aae9eb20b2325dd1b9960d491a3d72 463 Pfam PF07724 AAA domain (Cdc48 subfamily) 191 349 3.5E-41 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_3052 f1aae9eb20b2325dd1b9960d491a3d72 463 SUPERFAMILY SSF52540 6 460 2.08E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3052 f1aae9eb20b2325dd1b9960d491a3d72 463 SMART SM01086 355 449 3.2E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal MC28_C076 1a72af4d0e33d44ba69c32e217a798b5 808 Gene3D G3DSA:2.60.120.260 686 808 1.2E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C076 1a72af4d0e33d44ba69c32e217a798b5 808 Pfam PF03945 delta endotoxin, N-terminal domain 106 336 4.1E-25 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_C076 1a72af4d0e33d44ba69c32e217a798b5 808 SUPERFAMILY SSF49785 671 807 3.87E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C076 1a72af4d0e33d44ba69c32e217a798b5 808 SUPERFAMILY SSF49785 545 667 4.54E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C076 1a72af4d0e33d44ba69c32e217a798b5 808 Gene3D G3DSA:2.60.120.260 512 670 1.4E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C076 1a72af4d0e33d44ba69c32e217a798b5 808 Pfam PF03944 delta endotoxin 532 668 1.1E-10 T 14-10-2018 IPR005638 Pesticidal crystal protein, C-terminal GO:0090729 MC28_C076 1a72af4d0e33d44ba69c32e217a798b5 808 Gene3D G3DSA:1.20.190.10 98 339 2.4E-57 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_C076 1a72af4d0e33d44ba69c32e217a798b5 808 SUPERFAMILY SSF56849 104 341 1.09E-45 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_3474 bdc1af4ebe48f6f830f72637166bfac4 120 SUPERFAMILY SSF48013 1 116 1.83E-35 T 14-10-2018 IPR035926 NusB-like superfamily MC28_3474 bdc1af4ebe48f6f830f72637166bfac4 120 Pfam PF01029 NusB family 1 117 1.5E-37 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 MC28_3474 bdc1af4ebe48f6f830f72637166bfac4 120 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 1 119 3.4E-41 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 MC28_3474 bdc1af4ebe48f6f830f72637166bfac4 120 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 5 120 18.219 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 MC28_3474 bdc1af4ebe48f6f830f72637166bfac4 120 Gene3D G3DSA:1.10.940.10 1 120 6.1E-43 T 14-10-2018 IPR035926 NusB-like superfamily MC28_2040 d804eee63f8d428c50bb27633fde180f 108 Pfam PF12986 Domain of unknown function (DUF3870) 8 99 7.3E-33 T 14-10-2018 IPR024617 Domain of unknown function DUF3870 MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 Gene3D G3DSA:3.40.640.10 151 371 1.9E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 Gene3D G3DSA:3.90.1150.10 114 473 1.9E-105 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 Pfam PF00155 Aminotransferase class I and II 118 464 1.0E-35 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.9E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 SUPERFAMILY SSF46785 6 77 2.21E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 Gene3D G3DSA:1.10.10.10 4 77 2.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 8.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 8.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 SUPERFAMILY SSF53383 108 475 8.66E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_2925 963dec5a5328b1e3cf1d9f6df8fc5ac7 477 SMART SM00345 17 76 3.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2828 b23930dedd6046254d22d9463c68cf95 267 SUPERFAMILY SSF161098 71 258 1.96E-38 T 14-10-2018 IPR035906 MetI-like superfamily MC28_2828 b23930dedd6046254d22d9463c68cf95 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 265 3.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_2828 b23930dedd6046254d22d9463c68cf95 267 Gene3D G3DSA:1.10.3720.10 70 266 6.0E-37 T 14-10-2018 IPR035906 MetI-like superfamily MC28_2828 b23930dedd6046254d22d9463c68cf95 267 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 15 267 4.3E-90 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 MC28_G326 a3c2c859ab07eb03b0327ccf4bf5ee4c 206 Gene3D G3DSA:1.10.472.60 45 171 1.3E-42 T 14-10-2018 MC28_G326 a3c2c859ab07eb03b0327ccf4bf5ee4c 206 SUPERFAMILY SSF52833 8 205 5.81E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_G326 a3c2c859ab07eb03b0327ccf4bf5ee4c 206 Gene3D G3DSA:3.40.30.10 10 199 1.3E-42 T 14-10-2018 MC28_G326 a3c2c859ab07eb03b0327ccf4bf5ee4c 206 Pfam PF01323 DSBA-like thioredoxin domain 11 182 5.9E-8 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 SUPERFAMILY SSF51230 3 96 1.15E-26 T 14-10-2018 IPR011053 Single hybrid motif MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 Gene3D G3DSA:3.30.559.10 190 437 9.0E-94 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 Gene3D G3DSA:2.40.50.100 1 103 6.6E-28 T 14-10-2018 MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 SUPERFAMILY SSF47005 113 158 8.11E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 SUPERFAMILY SSF52777 208 429 1.78E-80 T 14-10-2018 MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 207 430 7.7E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 Gene3D G3DSA:4.10.320.10 112 165 9.7E-15 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 Pfam PF02817 e3 binding domain 120 154 2.1E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 MC28_3451 ed8536d001e53fb5a0805b6ecb403deb 437 Pfam PF00364 Biotin-requiring enzyme 5 77 1.6E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 SUPERFAMILY SSF69360 36 223 4.94E-52 T 14-10-2018 MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Gene3D G3DSA:3.90.1720.10 226 349 1.3E-39 T 14-10-2018 MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 SUPERFAMILY SSF54001 229 349 1.47E-35 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Pfam PF00877 NlpC/P60 family 243 345 3.3E-24 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Gene3D G3DSA:2.10.270.10 178 225 1.8E-9 T 14-10-2018 MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Pfam PF01473 Putative cell wall binding repeat 120 139 0.44 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Pfam PF01473 Putative cell wall binding repeat 142 155 0.01 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Pfam PF01473 Putative cell wall binding repeat 78 91 0.11 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Pfam PF01473 Putative cell wall binding repeat 56 70 2.6E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Pfam PF01473 Putative cell wall binding repeat 163 178 0.0031 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Pfam PF01473 Putative cell wall binding repeat 184 197 0.007 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Pfam PF01473 Putative cell wall binding repeat 99 118 0.034 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Gene3D G3DSA:2.10.270.10 22 125 5.1E-25 T 14-10-2018 MC28_3007 83ec385456d54e6a9fbcf7c60ae4c1bb 349 Gene3D G3DSA:2.10.270.10 126 177 1.1E-16 T 14-10-2018 MC28_5312 4719d32fbd182e1c2237ccb14711142b 285 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 40 278 1.6E-71 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 MC28_5312 4719d32fbd182e1c2237ccb14711142b 285 PIRSF PIRSF015626 14 281 6.0E-77 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 MC28_5312 4719d32fbd182e1c2237ccb14711142b 285 SUPERFAMILY SSF53927 24 278 4.51E-75 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 MC28_5312 4719d32fbd182e1c2237ccb14711142b 285 Pfam PF02634 FdhD/NarQ family 43 278 4.0E-78 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 MC28_5312 4719d32fbd182e1c2237ccb14711142b 285 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 19 279 31.119 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 MC28_5312 4719d32fbd182e1c2237ccb14711142b 285 Gene3D G3DSA:3.10.20.10 45 127 3.2E-15 T 14-10-2018 MC28_5312 4719d32fbd182e1c2237ccb14711142b 285 Gene3D G3DSA:3.40.140.10 134 282 4.6E-46 T 14-10-2018 MC28_1273 b84d4114902a42fdf38ce0083499d447 215 SUPERFAMILY SSF54631 1 121 2.4E-20 T 14-10-2018 MC28_1273 b84d4114902a42fdf38ce0083499d447 215 Gene3D G3DSA:3.10.580.10 1 124 1.6E-20 T 14-10-2018 MC28_1273 b84d4114902a42fdf38ce0083499d447 215 PIRSF PIRSF035040 1 208 9.5E-87 T 14-10-2018 IPR017036 Uncharacterised conserved protein UCP035040, CBS-type MC28_1273 b84d4114902a42fdf38ce0083499d447 215 Pfam PF00571 CBS domain 9 59 2.8E-6 T 14-10-2018 IPR000644 CBS domain MC28_1273 b84d4114902a42fdf38ce0083499d447 215 Pfam PF00571 CBS domain 77 120 0.007 T 14-10-2018 IPR000644 CBS domain MC28_3702 d54b0526ff82be9d33ec5b38838fa997 297 Pfam PF16916 Dimerisation domain of Zinc Transporter 218 294 8.4E-18 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain MC28_3702 d54b0526ff82be9d33ec5b38838fa997 297 Pfam PF01545 Cation efflux family 15 209 1.3E-45 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MC28_3702 d54b0526ff82be9d33ec5b38838fa997 297 Gene3D G3DSA:3.30.70.1350 222 293 5.2E-15 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 MC28_3702 d54b0526ff82be9d33ec5b38838fa997 297 Gene3D G3DSA:1.20.1510.10 12 213 1.2E-61 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily MC28_3702 d54b0526ff82be9d33ec5b38838fa997 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 294 9.8E-74 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MC28_3702 d54b0526ff82be9d33ec5b38838fa997 297 SUPERFAMILY SSF161111 7 214 2.88E-52 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily MC28_3702 d54b0526ff82be9d33ec5b38838fa997 297 SUPERFAMILY SSF160240 218 295 5.36E-17 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 MC28_1791 3ee2d186c577729e5f273ab9c1796289 142 Pfam PF07486 Cell Wall Hydrolase 24 129 1.3E-15 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 MC28_1791 3ee2d186c577729e5f273ab9c1796289 142 Gene3D G3DSA:1.10.10.2520 8 92 4.7E-13 T 14-10-2018 MC28_1053 ee7f14ea5d3bd15c9021fe47c96765ea 286 SUPERFAMILY SSF51261 155 247 6.28E-16 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_1053 ee7f14ea5d3bd15c9021fe47c96765ea 286 Gene3D G3DSA:2.70.70.10 126 270 1.2E-20 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_1053 ee7f14ea5d3bd15c9021fe47c96765ea 286 Pfam PF01551 Peptidase family M23 158 250 4.0E-15 T 14-10-2018 IPR016047 Peptidase M23 MC28_4418 e58bccaeee215d310683b8442f26ab00 107 SUPERFAMILY SSF46626 6 106 8.02E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 MC28_4418 e58bccaeee215d310683b8442f26ab00 107 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 103 2.0E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_4418 e58bccaeee215d310683b8442f26ab00 107 Gene3D G3DSA:1.10.760.10 38 107 1.0E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 MC28_4418 e58bccaeee215d310683b8442f26ab00 107 PIRSF PIRSF000025 1 107 2.4E-36 T 14-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 MC28_1951 03197205ec751d7fefca3b2956cc4477 279 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 16 279 2.5E-133 T 14-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 MC28_1951 03197205ec751d7fefca3b2956cc4477 279 Pfam PF03301 Tryptophan 2,3-dioxygenase 14 205 4.1E-46 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 MC28_1951 03197205ec751d7fefca3b2956cc4477 279 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 17 279 42.186 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 MC28_1951 03197205ec751d7fefca3b2956cc4477 279 Gene3D G3DSA:1.20.58.480 20 279 1.9E-102 T 14-10-2018 MC28_1951 03197205ec751d7fefca3b2956cc4477 279 SUPERFAMILY SSF140959 22 279 1.83E-104 T 14-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 Pfam PF00303 Thymidylate synthase 7 318 1.0E-121 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 PRINTS PR00108 Thymidylate synthase family signature 169 188 9.6E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 PRINTS PR00108 Thymidylate synthase family signature 195 210 9.6E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 PRINTS PR00108 Thymidylate synthase family signature 46 67 9.6E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 PRINTS PR00108 Thymidylate synthase family signature 213 239 9.6E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 PRINTS PR00108 Thymidylate synthase family signature 251 268 9.6E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 Gene3D G3DSA:3.30.572.10 3 318 2.8E-146 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 ProSitePatterns PS00091 Thymidylate synthase active site. 180 208 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 SUPERFAMILY SSF55831 3 318 6.28E-139 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 7 318 1.4E-170 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_1411 835a31feeb43b5345ba796ee88d1d177 318 Hamap MF_00008 Thymidylate synthase [thyA]. 5 318 40.758 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 MC28_G040 ded1fc8eb82bb94909553ea7d176d7ab 331 Gene3D G3DSA:3.90.550.10 76 280 1.7E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_G040 ded1fc8eb82bb94909553ea7d176d7ab 331 SUPERFAMILY SSF53448 76 274 4.5E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_G040 ded1fc8eb82bb94909553ea7d176d7ab 331 Pfam PF02348 Cytidylyltransferase 78 245 2.4E-19 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 MC28_4086 135b2bd38e3a7ed728fcaeb89074dd0a 271 PIRSF PIRSF006483 1 270 1.3E-73 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_4086 135b2bd38e3a7ed728fcaeb89074dd0a 271 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 208 262 2.9E-19 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_4086 135b2bd38e3a7ed728fcaeb89074dd0a 271 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 1 202 3.1E-48 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_4086 135b2bd38e3a7ed728fcaeb89074dd0a 271 Gene3D G3DSA:3.30.70.120 179 254 4.6E-15 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_0187 695e2fd9ee2cafc47d723212f8ff9c5f 257 Gene3D G3DSA:1.10.10.10 1 98 4.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0187 695e2fd9ee2cafc47d723212f8ff9c5f 257 Pfam PF11495 Archaeal transcriptional regulator TrmB 107 223 2.0E-5 T 14-10-2018 IPR021586 Transcription regulator TrmB, C-terminal MC28_0187 695e2fd9ee2cafc47d723212f8ff9c5f 257 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 4 72 2.1E-23 T 14-10-2018 IPR002831 Transcription regulator TrmB, N-terminal MC28_0187 695e2fd9ee2cafc47d723212f8ff9c5f 257 SUPERFAMILY SSF46785 3 93 1.33E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2832 501620548ffcea7799774571e8c46193 529 SUPERFAMILY SSF56300 5 319 1.0E-83 T 14-10-2018 MC28_2832 501620548ffcea7799774571e8c46193 529 Pfam PF02872 5'-nucleotidase, C-terminal domain 330 491 5.9E-29 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 Gene3D G3DSA:3.90.780.10 321 529 2.5E-69 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 PRINTS PR01607 Apyrase family signature 255 275 6.9E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 PRINTS PR01607 Apyrase family signature 375 398 6.9E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 PRINTS PR01607 Apyrase family signature 193 210 6.9E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 PRINTS PR01607 Apyrase family signature 9 27 6.9E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 PRINTS PR01607 Apyrase family signature 228 251 6.9E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 PRINTS PR01607 Apyrase family signature 465 484 6.9E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 SUPERFAMILY SSF55816 317 528 4.84E-50 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 ProSitePatterns PS00786 5'-nucleotidase signature 2. 93 104 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2832 501620548ffcea7799774571e8c46193 529 Gene3D G3DSA:3.60.21.10 9 319 9.9E-90 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_2832 501620548ffcea7799774571e8c46193 529 Pfam PF00149 Calcineurin-like phosphoesterase 11 245 6.5E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_4247 dbdd2c041e17fcb9693316c1823a2865 261 SMART SM00382 30 225 2.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4247 dbdd2c041e17fcb9693316c1823a2865 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 2.2E-113 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 MC28_4247 dbdd2c041e17fcb9693316c1823a2865 261 SUPERFAMILY SSF52540 6 233 5.45E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4247 dbdd2c041e17fcb9693316c1823a2865 261 Pfam PF00005 ABC transporter 21 173 8.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4247 dbdd2c041e17fcb9693316c1823a2865 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4247 dbdd2c041e17fcb9693316c1823a2865 261 Gene3D G3DSA:3.40.50.300 4 253 2.5E-55 T 14-10-2018 MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 Gene3D G3DSA:1.10.10.60 356 409 3.8E-15 T 14-10-2018 MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 360 402 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 390 406 6.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 375 390 6.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 Gene3D G3DSA:1.10.10.60 303 355 9.4E-14 T 14-10-2018 MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 Pfam PF10114 Sensory domain found in PocR 79 149 1.1E-5 T 14-10-2018 IPR018771 PocR domain MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 SMART SM00342 323 406 2.4E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 Pfam PF12833 Helix-turn-helix domain 329 406 3.1E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 SUPERFAMILY SSF46689 306 357 1.43E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2177 f8a25db9dd458a7173f8c5ba9b5f4465 411 SUPERFAMILY SSF46689 360 408 5.38E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_0301 899d6f5916ea49eda83bf3719362f560 705 Pfam PF00905 Penicillin binding protein transpeptidase domain 317 589 9.6E-39 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_0301 899d6f5916ea49eda83bf3719362f560 705 SUPERFAMILY SSF56601 207 609 2.36E-99 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_0301 899d6f5916ea49eda83bf3719362f560 705 SUPERFAMILY SSF53955 40 244 2.28E-75 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_0301 899d6f5916ea49eda83bf3719362f560 705 Pfam PF00912 Transglycosylase 51 225 2.0E-67 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_0301 899d6f5916ea49eda83bf3719362f560 705 Gene3D G3DSA:1.10.3810.10 61 249 2.7E-188 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_0301 899d6f5916ea49eda83bf3719362f560 705 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 61 593 2.2E-173 T 14-10-2018 MC28_0301 899d6f5916ea49eda83bf3719362f560 705 Gene3D G3DSA:3.40.710.10 291 604 2.7E-188 T 14-10-2018 MC28_0301 899d6f5916ea49eda83bf3719362f560 705 Gene3D G3DSA:3.90.1310.20 46 499 2.7E-188 T 14-10-2018 MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 Gene3D G3DSA:2.60.40.10 529 626 1.1E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 Gene3D G3DSA:2.60.40.10 352 439 4.8E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 Gene3D G3DSA:2.60.40.10 440 528 7.6E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 SUPERFAMILY SSF49478 542 609 7.06E-9 T 14-10-2018 MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1034 1066 2.2E-4 T 14-10-2018 MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 SUPERFAMILY SSF49478 362 421 1.33E-7 T 14-10-2018 MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 Gene3D G3DSA:2.60.40.3930 754 875 3.0E-24 T 14-10-2018 MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 Gene3D G3DSA:2.60.40.3930 876 1001 1.5E-24 T 14-10-2018 MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 Gene3D G3DSA:2.60.40.3930 627 753 1.3E-25 T 14-10-2018 MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 SUPERFAMILY SSF49478 273 336 2.82E-9 T 14-10-2018 MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 TIGRFAM TIGR03934 TQXA_dom: TQXA domain 68 107 7.9E-12 T 14-10-2018 IPR023849 Uncharacterised domain CHP03934, TQXA MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 SUPERFAMILY SSF49478 457 517 1.14E-7 T 14-10-2018 MC28_2671 71ba7bdcdf51408742ae9ada06ea1796 1067 Gene3D G3DSA:2.60.40.10 263 351 2.0E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4822 e11b17325360562de9996c4957eb0d78 199 Pfam PF00297 Ribosomal protein L3 88 170 1.5E-17 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4822 e11b17325360562de9996c4957eb0d78 199 Gene3D G3DSA:2.40.50.620 22 86 4.2E-16 T 14-10-2018 MC28_4822 e11b17325360562de9996c4957eb0d78 199 SUPERFAMILY SSF50447 1 197 3.53E-78 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_4822 e11b17325360562de9996c4957eb0d78 199 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 1 192 2.9E-84 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4822 e11b17325360562de9996c4957eb0d78 199 Gene3D G3DSA:2.40.30.10 122 198 1.0E-17 T 14-10-2018 MC28_4822 e11b17325360562de9996c4957eb0d78 199 ProSitePatterns PS00474 Ribosomal protein L3 signature. 91 114 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site MC28_4822 e11b17325360562de9996c4957eb0d78 199 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 195 35.017 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 Pfam PF03949 Malic enzyme, NAD binding domain 166 387 3.5E-25 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 PIRSF PIRSF000106 40 412 1.4E-86 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 SMART SM00919 164 388 2.8E-136 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 SUPERFAMILY SSF51735 164 408 1.01E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 Pfam PF00390 Malic enzyme, N-terminal domain 19 152 8.0E-31 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 Gene3D G3DSA:3.40.50.10380 3 161 6.2E-75 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 PRINTS PR00072 Malic enzyme signature 81 103 1.5E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 PRINTS PR00072 Malic enzyme signature 191 207 1.5E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 PRINTS PR00072 Malic enzyme signature 160 176 1.5E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 SUPERFAMILY SSF53223 10 162 1.65E-57 T 14-10-2018 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 SMART SM01274 19 152 2.6E-86 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 Gene3D G3DSA:3.40.50.720 162 414 9.4E-90 T 14-10-2018 MC28_3881 a61f3115a7501292a6a600be6ea1e865 415 ProSitePatterns PS00331 Malic enzymes signature. 160 176 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 ProSitePatterns PS00519 AsnC-type HTH domain signature. 42 68 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 Gene3D G3DSA:3.30.70.920 77 167 1.4E-23 T 14-10-2018 MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 Pfam PF13412 Winged helix-turn-helix DNA-binding 24 70 1.5E-13 T 14-10-2018 MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 SUPERFAMILY SSF54909 84 171 5.36E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 Gene3D G3DSA:1.10.10.10 16 76 1.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 51 70 2.2E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 40 51 2.2E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 40 2.2E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 SMART SM00344 24 133 7.0E-39 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 Pfam PF01037 Lrp/AsnC ligand binding domain 93 162 2.1E-19 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MC28_0106 e8f55253e32393141f42e09ebd254bfe 179 SUPERFAMILY SSF46785 23 84 1.31E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0587 cbb6b3ae4079261d7a1faf1fc5f29b9d 96 Pfam PF11256 Protein of unknown function (DUF3055) 7 84 7.6E-18 T 14-10-2018 IPR021415 Protein of unknown function DUF3055 MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 Gene3D G3DSA:3.30.470.20 185 374 5.0E-84 T 14-10-2018 MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 10 359 43.559 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 Pfam PF02222 ATP-grasp domain 115 284 2.2E-61 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 SUPERFAMILY SSF51246 308 376 1.26E-16 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 6 74 7.0E-6 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 SUPERFAMILY SSF52440 8 93 3.02E-27 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 Gene3D G3DSA:3.30.1490.20 116 184 3.8E-30 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 Gene3D G3DSA:3.40.50.20 1 115 3.1E-50 T 14-10-2018 MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 SUPERFAMILY SSF56059 106 304 1.27E-64 T 14-10-2018 MC28_5003 33169da4eaa7caa5c75f453c1034b4f9 383 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 361 4.7E-133 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 MC28_2736 b330830f2931d2d8565a99b7f1374109 571 PIRSF PIRSF002741 3 567 6.6E-107 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_2736 b330830f2931d2d8565a99b7f1374109 571 Gene3D G3DSA:3.40.190.10 68 552 2.1E-182 T 14-10-2018 MC28_2736 b330830f2931d2d8565a99b7f1374109 571 SUPERFAMILY SSF53850 52 561 1.19E-123 T 14-10-2018 MC28_2736 b330830f2931d2d8565a99b7f1374109 571 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 97 484 2.3E-78 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_2736 b330830f2931d2d8565a99b7f1374109 571 Gene3D G3DSA:3.10.105.10 310 537 2.1E-182 T 14-10-2018 MC28_2736 b330830f2931d2d8565a99b7f1374109 571 Gene3D G3DSA:3.90.76.10 87 209 2.1E-182 T 14-10-2018 MC28_1404 d4e493095d42940175b67a1a56e60e4b 175 PIRSF PIRSF004682 1 173 1.9E-39 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 MC28_1404 d4e493095d42940175b67a1a56e60e4b 175 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 134 1.3E-27 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 MC28_1404 d4e493095d42940175b67a1a56e60e4b 175 SUPERFAMILY SSF56784 2 173 5.47E-38 T 14-10-2018 IPR036412 HAD-like superfamily MC28_1404 d4e493095d42940175b67a1a56e60e4b 175 Pfam PF13242 HAD-hyrolase-like 91 167 9.3E-18 T 14-10-2018 MC28_1404 d4e493095d42940175b67a1a56e60e4b 175 Gene3D G3DSA:3.40.50.1000 4 175 1.1E-45 T 14-10-2018 IPR023214 HAD superfamily MC28_1404 d4e493095d42940175b67a1a56e60e4b 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 138 3.2E-24 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 MC28_3908 c8db9f4d98d5b8557525c1bcca807c08 411 Gene3D G3DSA:3.90.1260.10 184 411 1.3E-94 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_3908 c8db9f4d98d5b8557525c1bcca807c08 411 TIGRFAM TIGR00032 argG: argininosuccinate synthase 15 404 2.6E-174 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_3908 c8db9f4d98d5b8557525c1bcca807c08 411 Pfam PF00764 Arginosuccinate synthase 17 401 3.0E-180 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_3908 c8db9f4d98d5b8557525c1bcca807c08 411 SUPERFAMILY SSF52402 9 180 7.94E-48 T 14-10-2018 MC28_3908 c8db9f4d98d5b8557525c1bcca807c08 411 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 126 137 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_3908 c8db9f4d98d5b8557525c1bcca807c08 411 Gene3D G3DSA:3.40.50.620 8 183 3.1E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3908 c8db9f4d98d5b8557525c1bcca807c08 411 Hamap MF_00005 Argininosuccinate synthase [argG]. 13 406 54.434 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_3908 c8db9f4d98d5b8557525c1bcca807c08 411 SUPERFAMILY SSF69864 180 407 1.83E-95 T 14-10-2018 MC28_3908 c8db9f4d98d5b8557525c1bcca807c08 411 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 19 27 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 40 51 1.5E-29 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 382 397 1.5E-29 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 549 558 1.5E-29 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 220 243 1.5E-29 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 509 522 1.5E-29 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 Gene3D G3DSA:3.90.740.10 196 388 7.3E-251 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 SUPERFAMILY SSF50677 200 384 4.08E-51 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 Pfam PF08264 Anticodon-binding domain of tRNA 675 817 1.6E-29 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 2 1026 13.83 T 14-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 10 830 3.6E-289 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 Gene3D G3DSA:3.40.50.620 14 615 7.3E-251 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 SUPERFAMILY SSF47323 946 1014 3.4E-5 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 SUPERFAMILY SSF47323 645 878 1.03E-46 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 SUPERFAMILY SSF52374 12 637 2.25E-138 T 14-10-2018 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 623 9.5E-190 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1388 84c6e4d7defabf554acddc8428d3237d 1033 Gene3D G3DSA:1.10.730.10 631 811 5.0E-49 T 14-10-2018 MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 Gene3D G3DSA:3.30.565.10 428 580 3.0E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 SMART SM00387 469 580 2.8E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 558 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 577 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 Gene3D G3DSA:1.10.287.130 281 417 2.3E-12 T 14-10-2018 MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 SUPERFAMILY SSF55874 412 578 7.47E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 SUPERFAMILY SSF47384 350 423 8.24E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 578 1.8E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 Pfam PF00512 His Kinase A (phospho-acceptor) domain 356 414 1.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0337 e42d3d09e87a6aad294020dd5de5aa6a 580 SMART SM00388 355 423 8.3E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 SMART SM00839 191 420 2.4E-81 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 Gene3D G3DSA:3.40.50.720 189 423 7.0E-81 T 14-10-2018 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 PIRSF PIRSF000185 10 423 5.7E-158 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 189 420 2.3E-67 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 108 121 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 100 114 2.2E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 348 359 2.2E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 180 202 2.2E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 222 242 2.2E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 SUPERFAMILY SSF51735 189 422 1.97E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 43 170 1.1E-52 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 SUPERFAMILY SSF53223 10 191 2.08E-64 T 14-10-2018 MC28_0586 286f231a41529e84a301e6a3b8c1d54d 424 Gene3D G3DSA:3.40.50.10860 45 188 2.3E-61 T 14-10-2018 MC28_0740 18484544b9637597c537162430025c26 86 Pfam PF14069 Stage VI sporulation protein F 9 80 7.8E-30 T 14-10-2018 IPR025942 Stage VI sporulation protein F MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 209 2.4E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 Pfam PF00072 Response regulator receiver domain 5 117 1.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 Gene3D G3DSA:3.40.50.12740 3 215 1.9E-75 T 14-10-2018 MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 SMART SM00421 152 209 7.1E-26 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 SUPERFAMILY SSF52172 2 134 2.42E-37 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 SMART SM00448 3 116 3.5E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4644 2fea873cabaebedd70eaffef44f35f03 215 SUPERFAMILY SSF46894 138 215 4.76E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_5093 714ff3fb968d73f93c80a03cc7d5c719 444 Gene3D G3DSA:3.40.462.20 206 395 3.8E-101 T 14-10-2018 MC28_5093 714ff3fb968d73f93c80a03cc7d5c719 444 Pfam PF01565 FAD binding domain 35 164 3.0E-27 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 MC28_5093 714ff3fb968d73f93c80a03cc7d5c719 444 Gene3D G3DSA:3.30.43.10 8 86 7.6E-22 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 MC28_5093 714ff3fb968d73f93c80a03cc7d5c719 444 Pfam PF08031 Berberine and berberine like 397 440 2.2E-21 T 14-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 MC28_5093 714ff3fb968d73f93c80a03cc7d5c719 444 Gene3D G3DSA:3.30.465.50 90 441 3.8E-101 T 14-10-2018 MC28_5093 714ff3fb968d73f93c80a03cc7d5c719 444 SUPERFAMILY SSF56176 6 204 8.41E-51 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_1704 cffd8a81551face90cd83c79f4f88159 206 Gene3D G3DSA:3.40.50.1110 9 200 1.1E-30 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_1704 cffd8a81551face90cd83c79f4f88159 206 SUPERFAMILY SSF52266 11 199 9.87E-35 T 14-10-2018 MC28_1704 cffd8a81551face90cd83c79f4f88159 206 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 16 188 2.4E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain MC28_4746 add60522601ceacd9cdb227d4068af7a 327 Pfam PF13177 DNA polymerase III, delta subunit 13 170 7.7E-57 T 14-10-2018 MC28_4746 add60522601ceacd9cdb227d4068af7a 327 Gene3D G3DSA:3.40.50.300 10 170 1.3E-52 T 14-10-2018 MC28_4746 add60522601ceacd9cdb227d4068af7a 327 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 198 1.3E-62 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_4746 add60522601ceacd9cdb227d4068af7a 327 SUPERFAMILY SSF52540 11 207 8.96E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3584 de6af6744f62202e698ba70280faaf2d 375 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 138 363 3.2E-39 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Pfam PF04542 Sigma-70 region 2 142 211 3.7E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Pfam PF03979 Sigma-70 factor, region 1.1 17 81 1.5E-15 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 335 361 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 11 375 33.953 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Pfam PF04545 Sigma-70, region 4 310 363 5.2E-20 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 138 374 1.1E-124 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Pfam PF00140 Sigma-70 factor, region 1.2 104 137 8.4E-18 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Pfam PF04539 Sigma-70 region 3 221 297 1.4E-31 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Gene3D G3DSA:1.10.601.10 137 214 8.4E-51 T 14-10-2018 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Gene3D G3DSA:1.10.601.10 102 136 3.0E-11 T 14-10-2018 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 166 179 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 SUPERFAMILY SSF88659 215 288 2.43E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Gene3D G3DSA:1.10.10.10 291 375 2.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3584 de6af6744f62202e698ba70280faaf2d 375 PRINTS PR00046 Major sigma-70 factor signature 314 326 3.2E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 PRINTS PR00046 Major sigma-70 factor signature 190 198 3.2E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 PRINTS PR00046 Major sigma-70 factor signature 335 350 3.2E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 PRINTS PR00046 Major sigma-70 factor signature 166 179 3.2E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 PRINTS PR00046 Major sigma-70 factor signature 350 361 3.2E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Gene3D G3DSA:1.10.10.10 215 290 8.1E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3584 de6af6744f62202e698ba70280faaf2d 375 SUPERFAMILY SSF88659 272 373 4.11E-30 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_3584 de6af6744f62202e698ba70280faaf2d 375 Gene3D G3DSA:1.10.220.120 15 75 1.3E-8 T 14-10-2018 MC28_3584 de6af6744f62202e698ba70280faaf2d 375 SUPERFAMILY SSF88946 103 212 1.96E-54 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 249 8.9E-56 T 14-10-2018 MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 SUPERFAMILY SSF51735 3 250 1.34E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 7.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 7.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1030 53de4c31cf92a2138937c7b418806bb4 252 Gene3D G3DSA:3.40.50.720 1 252 5.6E-86 T 14-10-2018 MC28_0463 bd75caceebf12b6757aeb4d7c6d0b507 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 13 396 2.7E-197 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 MC28_0463 bd75caceebf12b6757aeb4d7c6d0b507 400 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 MC28_0463 bd75caceebf12b6757aeb4d7c6d0b507 400 Gene3D G3DSA:3.40.50.1100 60 390 1.2E-193 T 14-10-2018 MC28_0463 bd75caceebf12b6757aeb4d7c6d0b507 400 SUPERFAMILY SSF53686 9 395 1.83E-148 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_0463 bd75caceebf12b6757aeb4d7c6d0b507 400 Gene3D G3DSA:3.40.50.1100 16 212 1.2E-193 T 14-10-2018 MC28_0463 bd75caceebf12b6757aeb4d7c6d0b507 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 384 7.6E-45 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_0463 bd75caceebf12b6757aeb4d7c6d0b507 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 8 397 53.905 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 MC28_0463 bd75caceebf12b6757aeb4d7c6d0b507 400 PIRSF PIRSF001413 2 400 6.9E-169 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 MC28_F168 e98996d74721f332fdbafaebc9176c48 367 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 356 2.7E-61 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_F168 e98996d74721f332fdbafaebc9176c48 367 Pfam PF03845 Spore germination protein 9 324 1.4E-57 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 Pfam PF00155 Aminotransferase class I and II 116 440 2.4E-32 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 Gene3D G3DSA:3.40.640.10 133 353 1.2E-108 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 56 1.0E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 Gene3D G3DSA:3.90.1150.10 93 456 1.2E-108 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 SUPERFAMILY SSF46785 2 64 6.25E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 Gene3D G3DSA:1.10.10.10 1 59 5.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 SMART SM00345 2 56 2.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 SUPERFAMILY SSF53383 86 459 2.28E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 46 3.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1872 7ea7269b72f72ae38da8077e0d3c0644 461 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 16 30 3.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_4202 ea2345542deaa2d2cddc23857be38b52 187 SUPERFAMILY SSF55729 10 186 3.62E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4202 ea2345542deaa2d2cddc23857be38b52 187 Pfam PF13302 Acetyltransferase (GNAT) domain 40 160 3.4E-22 T 14-10-2018 IPR000182 GNAT domain MC28_4202 ea2345542deaa2d2cddc23857be38b52 187 Gene3D G3DSA:3.40.630.30 7 186 6.8E-38 T 14-10-2018 MC28_3433 67fe47790dc0c5ca8af1bf3adff108c1 307 Gene3D G3DSA:3.60.15.10 1 305 2.2E-105 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3433 67fe47790dc0c5ca8af1bf3adff108c1 307 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 41.813 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 MC28_3433 67fe47790dc0c5ca8af1bf3adff108c1 307 Pfam PF00753 Metallo-beta-lactamase superfamily 26 90 3.2E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3433 67fe47790dc0c5ca8af1bf3adff108c1 307 SMART SM00849 18 270 0.001 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3433 67fe47790dc0c5ca8af1bf3adff108c1 307 Pfam PF12706 Beta-lactamase superfamily domain 203 271 3.6E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3433 67fe47790dc0c5ca8af1bf3adff108c1 307 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 303 9.4E-119 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 MC28_3433 67fe47790dc0c5ca8af1bf3adff108c1 307 SUPERFAMILY SSF56281 2 304 4.06E-85 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_0162 3c7f128ffc2d647572ae4bfc9bd06cb9 325 Gene3D G3DSA:3.40.50.720 124 298 5.8E-102 T 14-10-2018 MC28_0162 3c7f128ffc2d647572ae4bfc9bd06cb9 325 Gene3D G3DSA:3.30.1780.10 4 320 5.8E-102 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 MC28_0162 3c7f128ffc2d647572ae4bfc9bd06cb9 325 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 317 3.0E-84 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 MC28_0162 3c7f128ffc2d647572ae4bfc9bd06cb9 325 PIRSF PIRSF001439 1 325 1.1E-90 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 MC28_0162 3c7f128ffc2d647572ae4bfc9bd06cb9 325 SUPERFAMILY SSF51735 1 325 1.88E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4627 47f05196b34aa4dde31325d53f87df2a 330 Pfam PF07885 Ion channel 13 86 7.4E-15 T 14-10-2018 IPR013099 Potassium channel domain MC28_4627 47f05196b34aa4dde31325d53f87df2a 330 SUPERFAMILY SSF51735 106 244 3.66E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4627 47f05196b34aa4dde31325d53f87df2a 330 SUPERFAMILY SSF81324 4 129 1.96E-27 T 14-10-2018 MC28_4627 47f05196b34aa4dde31325d53f87df2a 330 Gene3D G3DSA:1.10.287.70 1 108 8.7E-23 T 14-10-2018 MC28_4627 47f05196b34aa4dde31325d53f87df2a 330 SUPERFAMILY SSF116726 251 326 6.15E-19 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_4627 47f05196b34aa4dde31325d53f87df2a 330 Pfam PF02254 TrkA-N domain 110 222 1.0E-33 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 MC28_4627 47f05196b34aa4dde31325d53f87df2a 330 Gene3D G3DSA:3.40.50.720 109 248 3.2E-39 T 14-10-2018 MC28_4627 47f05196b34aa4dde31325d53f87df2a 330 Gene3D G3DSA:3.30.70.1450 253 329 5.1E-18 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_4627 47f05196b34aa4dde31325d53f87df2a 330 Pfam PF02080 TrkA-C domain 257 326 3.5E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 MC28_2476 19825e9b0c24caca91bf39dba9ec7fa9 314 SUPERFAMILY SSF56112 30 260 2.48E-23 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_2476 19825e9b0c24caca91bf39dba9ec7fa9 314 Gene3D G3DSA:3.90.1200.10 127 308 6.3E-12 T 14-10-2018 MC28_2476 19825e9b0c24caca91bf39dba9ec7fa9 314 Pfam PF01636 Phosphotransferase enzyme family 44 257 3.4E-8 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_2948 4a5d24e046c35725fed499ba2bc39e67 141 SUPERFAMILY SSF54752 65 123 1.44E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal MC28_2948 4a5d24e046c35725fed499ba2bc39e67 141 PRINTS PR00142 RecA protein signature 94 111 1.3E-36 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MC28_2948 4a5d24e046c35725fed499ba2bc39e67 141 PRINTS PR00142 RecA protein signature 40 69 1.3E-36 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MC28_2948 4a5d24e046c35725fed499ba2bc39e67 141 PRINTS PR00142 RecA protein signature 7 35 1.3E-36 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MC28_2948 4a5d24e046c35725fed499ba2bc39e67 141 Gene3D G3DSA:3.30.250.10 65 140 1.5E-27 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal MC28_2948 4a5d24e046c35725fed499ba2bc39e67 141 Pfam PF00154 recA bacterial DNA recombination protein 2 65 1.7E-28 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MC28_2948 4a5d24e046c35725fed499ba2bc39e67 141 Gene3D G3DSA:3.40.50.300 1 64 3.9E-15 T 14-10-2018 MC28_2948 4a5d24e046c35725fed499ba2bc39e67 141 SUPERFAMILY SSF52540 4 64 8.06E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2948 4a5d24e046c35725fed499ba2bc39e67 141 ProSitePatterns PS00321 recA signature. 10 18 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 MC28_2949 e7d4c02b5a71e6197a1e247a583ca0e1 207 Gene3D G3DSA:3.40.960.10 107 204 5.5E-20 T 14-10-2018 MC28_F026 cfe283aec9cb6b282f6c1efd7fde8ce4 82 Pfam PF17362 Family of unknown function 4 82 2.1E-31 T 14-10-2018 IPR020270 Uncharacterised protein family, plasmid pXO2-34 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 287 1.6E-24 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 PIRSF PIRSF500136 1 421 2.1E-157 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 SUPERFAMILY SSF51735 5 194 3.24E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 SMART SM00984 309 405 4.0E-37 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 Gene3D G3DSA:3.40.50.720 199 418 6.3E-67 T 14-10-2018 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 SUPERFAMILY SSF52413 300 405 8.76E-30 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 309 404 1.2E-28 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 Gene3D G3DSA:3.40.50.720 1 198 4.2E-68 T 14-10-2018 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 SUPERFAMILY SSF48179 200 292 7.48E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 PIRSF PIRSF000124 5 417 1.0E-84 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 401 1.3E-133 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 MC28_4501 043a4bca2bd5f3f26fc6bd1d3665b953 429 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 183 2.7E-55 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_2685 05d59cefec6388ed693ef94d2a5bd1ca 363 Pfam PF13037 Domain of unknown function (DUF3898) 261 350 5.1E-43 T 14-10-2018 IPR025012 Domain of unknown function DUF3898 MC28_2685 05d59cefec6388ed693ef94d2a5bd1ca 363 Pfam PF13039 Protein of unknown function (DUF3900) 2 254 3.5E-136 T 14-10-2018 IPR025006 Protein of unknown function DUF3900 MC28_E116 09d9c4a47c335b55ca0ef2912f2c89f3 97 Pfam PF01609 Transposase DDE domain 1 51 7.8E-14 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_E116 09d9c4a47c335b55ca0ef2912f2c89f3 97 SUPERFAMILY SSF53098 1 84 4.17E-20 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 131 264 2.0E-32 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 Gene3D G3DSA:3.40.50.720 5 263 1.9E-73 T 14-10-2018 MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 128 6.4E-32 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 Gene3D G3DSA:3.30.360.10 130 235 1.9E-73 T 14-10-2018 MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 266 29.848 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 266 9.0E-85 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 SUPERFAMILY SSF55347 129 237 4.14E-38 T 14-10-2018 MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 PIRSF PIRSF000161 2 266 5.0E-67 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0766 2712b1b1a459fe3e9db610fcdb999f05 266 SUPERFAMILY SSF51735 4 155 6.86E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3757 f900262c98289b671c4696e917392f35 277 Pfam PF01578 Cytochrome C assembly protein 71 270 7.3E-28 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 MC28_3306 0e93fd0730d257c8b6c0be2cbb75d291 366 Gene3D G3DSA:2.40.50.100 240 363 8.9E-35 T 14-10-2018 MC28_3306 0e93fd0730d257c8b6c0be2cbb75d291 366 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3306 0e93fd0730d257c8b6c0be2cbb75d291 366 SUPERFAMILY SSF50331 237 365 1.21E-28 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal MC28_3306 0e93fd0730d257c8b6c0be2cbb75d291 366 Gene3D G3DSA:3.40.50.300 1 239 1.2E-75 T 14-10-2018 MC28_3306 0e93fd0730d257c8b6c0be2cbb75d291 366 SMART SM00382 29 212 3.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3306 0e93fd0730d257c8b6c0be2cbb75d291 366 Pfam PF08402 TOBE domain 282 357 5.9E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 MC28_3306 0e93fd0730d257c8b6c0be2cbb75d291 366 SUPERFAMILY SSF52540 4 243 2.93E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3306 0e93fd0730d257c8b6c0be2cbb75d291 366 Pfam PF00005 ABC transporter 21 162 3.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3306 0e93fd0730d257c8b6c0be2cbb75d291 366 Gene3D G3DSA:2.40.50.140 304 349 8.9E-35 T 14-10-2018 MC28_0338 a347fac5d82ddcbedddf0fde9350621c 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 6.3E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_0338 a347fac5d82ddcbedddf0fde9350621c 234 Gene3D G3DSA:3.40.50.2300 2 132 5.7E-35 T 14-10-2018 MC28_0338 a347fac5d82ddcbedddf0fde9350621c 234 SMART SM00448 4 115 5.8E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0338 a347fac5d82ddcbedddf0fde9350621c 234 Pfam PF00072 Response regulator receiver domain 6 115 2.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0338 a347fac5d82ddcbedddf0fde9350621c 234 SUPERFAMILY SSF52172 3 126 2.85E-37 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0338 a347fac5d82ddcbedddf0fde9350621c 234 SMART SM00862 154 231 7.9E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_0338 a347fac5d82ddcbedddf0fde9350621c 234 Gene3D G3DSA:1.10.10.10 133 234 1.3E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0338 a347fac5d82ddcbedddf0fde9350621c 234 SUPERFAMILY SSF46894 130 232 1.84E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_4786 cf4836e44b37ed0cddfcbd592ed4d11b 280 Gene3D G3DSA:3.20.20.20 4 280 7.9E-120 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_4786 cf4836e44b37ed0cddfcbd592ed4d11b 280 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 274 3.7E-101 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 MC28_4786 cf4836e44b37ed0cddfcbd592ed4d11b 280 Pfam PF00809 Pterin binding enzyme 26 259 7.4E-88 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_4786 cf4836e44b37ed0cddfcbd592ed4d11b 280 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 59 72 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_4786 cf4836e44b37ed0cddfcbd592ed4d11b 280 SUPERFAMILY SSF51717 12 276 3.92E-103 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_4786 cf4836e44b37ed0cddfcbd592ed4d11b 280 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 25 40 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_5377 1a28746098a3c8b6f55f35ab33f575ba 174 SUPERFAMILY SSF53597 3 170 1.83E-37 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 MC28_5377 1a28746098a3c8b6f55f35ab33f575ba 174 Pfam PF01872 RibD C-terminal domain 4 164 4.9E-23 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 MC28_5377 1a28746098a3c8b6f55f35ab33f575ba 174 Gene3D G3DSA:3.40.430.10 1 173 6.1E-49 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 MC28_4373 64d16a7d07d0ae96a94b958ff5fe7758 84 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 63 8.0E-18 T 14-10-2018 IPR008554 Glutaredoxin-like MC28_4373 64d16a7d07d0ae96a94b958ff5fe7758 84 SUPERFAMILY SSF52833 2 81 5.46E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_4373 64d16a7d07d0ae96a94b958ff5fe7758 84 Gene3D G3DSA:3.40.30.10 1 78 1.1E-19 T 14-10-2018 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 SUPERFAMILY SSF48452 216 420 1.8E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 Pfam PF14559 Tetratricopeptide repeat 63 118 1.7E-5 T 14-10-2018 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 Gene3D G3DSA:1.25.40.10 120 181 1.7E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 Pfam PF13429 Tetratricopeptide repeat 232 413 3.3E-8 T 14-10-2018 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 Gene3D G3DSA:1.25.40.10 186 433 3.0E-41 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 Pfam PF13176 Tetratricopeptide repeat 188 215 1.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 Pfam PF13176 Tetratricopeptide repeat 154 177 0.0088 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 SUPERFAMILY SSF48452 47 213 1.75E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 SMART SM00028 353 386 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 SMART SM00028 148 181 41.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 SMART SM00028 285 318 0.0017 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 SMART SM00028 184 217 2.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 SMART SM00028 387 420 72.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0753 85ac50c884f46c61569bad6033a3a6f7 434 SMART SM00028 251 284 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0864 622d767b793f809bbc73013e967221dc 159 Gene3D G3DSA:1.10.10.10 88 156 1.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0864 622d767b793f809bbc73013e967221dc 159 Pfam PF04542 Sigma-70 region 2 5 72 8.4E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0864 622d767b793f809bbc73013e967221dc 159 SUPERFAMILY SSF88946 3 85 8.24E-7 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0864 622d767b793f809bbc73013e967221dc 159 SUPERFAMILY SSF88659 98 156 6.92E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_0864 622d767b793f809bbc73013e967221dc 159 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 153 6.0E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_0864 622d767b793f809bbc73013e967221dc 159 Pfam PF08281 Sigma-70, region 4 99 151 6.1E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_0864 622d767b793f809bbc73013e967221dc 159 Gene3D G3DSA:1.10.1740.10 1 71 1.1E-7 T 14-10-2018 MC28_2773 0d242f5581292765449c790caf2ca5af 363 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 359 7.1E-113 T 14-10-2018 IPR002155 Thiolase GO:0016747 MC28_2773 0d242f5581292765449c790caf2ca5af 363 PIRSF PIRSF000429 1 362 1.3E-110 T 14-10-2018 IPR002155 Thiolase GO:0016747 MC28_2773 0d242f5581292765449c790caf2ca5af 363 Gene3D G3DSA:3.40.47.10 121 357 6.0E-119 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_2773 0d242f5581292765449c790caf2ca5af 363 SUPERFAMILY SSF53901 4 361 1.15E-52 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_2773 0d242f5581292765449c790caf2ca5af 363 Pfam PF00108 Thiolase, N-terminal domain 5 230 8.1E-47 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 MC28_2773 0d242f5581292765449c790caf2ca5af 363 Pfam PF02803 Thiolase, C-terminal domain 239 360 2.6E-37 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 MC28_2773 0d242f5581292765449c790caf2ca5af 363 Gene3D G3DSA:3.40.47.10 5 244 6.0E-119 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_2773 0d242f5581292765449c790caf2ca5af 363 ProSitePatterns PS00737 Thiolases signature 2. 307 323 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 MC28_4844 c63496b799426641fe10907024d49109 236 Hamap MF_01974 Methionine aminopeptidase [map]. 1 236 39.599 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4844 c63496b799426641fe10907024d49109 236 Gene3D G3DSA:3.90.230.10 1 236 2.8E-104 T 14-10-2018 MC28_4844 c63496b799426641fe10907024d49109 236 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 153 171 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4844 c63496b799426641fe10907024d49109 236 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 235 8.3E-100 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4844 c63496b799426641fe10907024d49109 236 SUPERFAMILY SSF55920 1 234 2.88E-87 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like MC28_4844 c63496b799426641fe10907024d49109 236 PRINTS PR00599 Methionine aminopeptidase-1 signature 147 159 3.0E-23 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4844 c63496b799426641fe10907024d49109 236 PRINTS PR00599 Methionine aminopeptidase-1 signature 55 68 3.0E-23 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4844 c63496b799426641fe10907024d49109 236 PRINTS PR00599 Methionine aminopeptidase-1 signature 178 190 3.0E-23 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4844 c63496b799426641fe10907024d49109 236 PRINTS PR00599 Methionine aminopeptidase-1 signature 77 93 3.0E-23 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4844 c63496b799426641fe10907024d49109 236 Pfam PF00557 Metallopeptidase family M24 1 227 3.8E-57 T 14-10-2018 IPR000994 Peptidase M24 MC28_2785 66e655ac9f109e8bb92f317b250beeed 279 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 14 214 1.6E-61 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_2785 66e655ac9f109e8bb92f317b250beeed 279 Gene3D G3DSA:3.30.70.120 191 267 3.0E-21 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_2785 66e655ac9f109e8bb92f317b250beeed 279 PIRSF PIRSF006483 1 279 1.6E-87 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_2785 66e655ac9f109e8bb92f317b250beeed 279 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 220 274 1.7E-21 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_2874 1c33bbbc44475c3ec2709d67c670b46c 172 SUPERFAMILY SSF46689 56 160 4.48E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2874 1c33bbbc44475c3ec2709d67c670b46c 172 Pfam PF13518 Helix-turn-helix domain 8 55 7.4E-8 T 14-10-2018 MC28_2874 1c33bbbc44475c3ec2709d67c670b46c 172 Pfam PF13518 Helix-turn-helix domain 63 116 1.1E-9 T 14-10-2018 MC28_2874 1c33bbbc44475c3ec2709d67c670b46c 172 SUPERFAMILY SSF48295 3 55 3.03E-12 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 MC28_3753 80cb5cbe44fbd52bf11ef5e03b8fb162 429 Gene3D G3DSA:3.90.1150.10 10 421 5.1E-184 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3753 80cb5cbe44fbd52bf11ef5e03b8fb162 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3753 80cb5cbe44fbd52bf11ef5e03b8fb162 429 Pfam PF00202 Aminotransferase class-III 35 394 1.4E-76 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3753 80cb5cbe44fbd52bf11ef5e03b8fb162 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 425 3.4E-200 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 MC28_3753 80cb5cbe44fbd52bf11ef5e03b8fb162 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 427 106.694 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 MC28_3753 80cb5cbe44fbd52bf11ef5e03b8fb162 429 Gene3D G3DSA:3.40.640.10 72 319 5.1E-184 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3753 80cb5cbe44fbd52bf11ef5e03b8fb162 429 SUPERFAMILY SSF53383 4 426 3.1E-131 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_1781 ab2fe6f14648526ff10b722b9f1f0f4b 459 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 1.0E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1781 ab2fe6f14648526ff10b722b9f1f0f4b 459 SMART SM00345 10 69 1.2E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1781 ab2fe6f14648526ff10b722b9f1f0f4b 459 Gene3D G3DSA:3.40.640.10 72 441 2.4E-79 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1781 ab2fe6f14648526ff10b722b9f1f0f4b 459 Gene3D G3DSA:1.10.10.10 3 71 2.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1781 ab2fe6f14648526ff10b722b9f1f0f4b 459 SUPERFAMILY SSF46785 5 71 1.43E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1781 ab2fe6f14648526ff10b722b9f1f0f4b 459 SUPERFAMILY SSF53383 67 446 5.41E-67 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_1781 ab2fe6f14648526ff10b722b9f1f0f4b 459 Pfam PF00155 Aminotransferase class I and II 84 441 1.7E-23 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_G064 6e7e9c65ed391922c85fb02841ec135e 325 SUPERFAMILY SSF82282 14 315 1.7E-83 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 MC28_G064 6e7e9c65ed391922c85fb02841ec135e 325 Gene3D G3DSA:3.20.20.330 3 311 4.5E-111 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 MC28_G064 6e7e9c65ed391922c85fb02841ec135e 325 PIRSF PIRSF037505 7 104 2.5E-4 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 MC28_G064 6e7e9c65ed391922c85fb02841ec135e 325 PIRSF PIRSF037505 264 324 5.3E-4 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 MC28_G064 6e7e9c65ed391922c85fb02841ec135e 325 Pfam PF02574 Homocysteine S-methyltransferase 19 310 5.0E-79 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 Gene3D G3DSA:1.25.10.110 295 370 3.6E-10 T 14-10-2018 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 Pfam PF13646 HEAT repeats 300 365 1.7E-9 T 14-10-2018 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 Gene3D G3DSA:3.30.70.20 181 259 3.6E-5 T 14-10-2018 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 SUPERFAMILY SSF48371 295 372 2.06E-10 T 14-10-2018 IPR016024 Armadillo-type fold MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 SMART SM00567 E-Z type HEAT repeats 330 359 0.0037 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 SMART SM00567 E-Z type HEAT repeats 298 327 89.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 SUPERFAMILY SSF54862 164 252 5.44E-17 T 14-10-2018 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 Pfam PF13484 4Fe-4S double cluster binding domain 187 250 2.8E-16 T 14-10-2018 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 5.0E-18 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 309 43.852 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 MC28_5269 3600cf185f6ae27d9b68b0268b47378f 380 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 11 342 1.3E-129 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 SUPERFAMILY SSF56059 83 349 1.31E-66 T 14-10-2018 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 Pfam PF02785 Biotin carboxylase C-terminal domain 337 444 7.5E-45 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 4.0E-81 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 SUPERFAMILY SSF51246 332 445 1.73E-48 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 SUPERFAMILY SSF52440 1 113 1.51E-51 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 3.8E-240 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 SMART SM00878 337 443 2.6E-72 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 Gene3D G3DSA:3.30.470.130 1 450 4.4E-202 T 14-10-2018 MC28_3476 6dbd5f2fe55fb4c756d2c5d4e19199e0 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.6E-48 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 MC28_0274 e0270f934cd0689d319544b5fb1e5c9e 777 Gene3D G3DSA:3.40.50.300 605 775 2.0E-56 T 14-10-2018 MC28_0274 e0270f934cd0689d319544b5fb1e5c9e 777 Gene3D G3DSA:3.40.50.300 467 594 7.7E-9 T 14-10-2018 MC28_0274 e0270f934cd0689d319544b5fb1e5c9e 777 Gene3D G3DSA:3.40.50.300 202 433 1.9E-10 T 14-10-2018 MC28_0274 e0270f934cd0689d319544b5fb1e5c9e 777 SUPERFAMILY SSF52540 201 758 1.44E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0274 e0270f934cd0689d319544b5fb1e5c9e 777 Pfam PF13245 AAA domain 214 579 3.8E-11 T 14-10-2018 MC28_0274 e0270f934cd0689d319544b5fb1e5c9e 777 Pfam PF13538 UvrD-like helicase C-terminal domain 706 753 6.3E-8 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain MC28_2139 c024fe1bed278a91909096ce286b114d 429 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 MC28_2139 c024fe1bed278a91909096ce286b114d 429 SUPERFAMILY SSF55205 11 427 1.1E-137 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 MC28_2139 c024fe1bed278a91909096ce286b114d 429 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 429 33.583 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 MC28_2139 c024fe1bed278a91909096ce286b114d 429 ProSitePatterns PS00885 EPSP synthase signature 2. 341 359 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 MC28_2139 c024fe1bed278a91909096ce286b114d 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 424 1.2E-128 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 MC28_2139 c024fe1bed278a91909096ce286b114d 429 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 428 4.6E-135 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 MC28_2139 c024fe1bed278a91909096ce286b114d 429 PIRSF PIRSF000505 1 429 2.4E-121 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 MC28_2139 c024fe1bed278a91909096ce286b114d 429 Gene3D G3DSA:3.65.10.10 23 231 1.6E-157 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 MC28_2139 c024fe1bed278a91909096ce286b114d 429 Gene3D G3DSA:3.65.10.10 13 424 1.6E-157 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 MC28_3566 40d11fc767f6ef29c1c56922a87fdc7f 425 Gene3D G3DSA:1.20.1250.20 10 341 3.5E-26 T 14-10-2018 MC28_3566 40d11fc767f6ef29c1c56922a87fdc7f 425 Pfam PF07690 Major Facilitator Superfamily 20 337 4.4E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_3566 40d11fc767f6ef29c1c56922a87fdc7f 425 SUPERFAMILY SSF103473 13 373 2.35E-28 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4906 f73de76fbb93266767afcb4d4034d617 325 Gene3D G3DSA:1.10.260.40 1 59 2.5E-21 T 14-10-2018 MC28_4906 f73de76fbb93266767afcb4d4034d617 325 SUPERFAMILY SSF53822 61 325 2.14E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_4906 f73de76fbb93266767afcb4d4034d617 325 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_4906 f73de76fbb93266767afcb4d4034d617 325 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_4906 f73de76fbb93266767afcb4d4034d617 325 SUPERFAMILY SSF47413 1 60 5.55E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_4906 f73de76fbb93266767afcb4d4034d617 325 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 MC28_4906 f73de76fbb93266767afcb4d4034d617 325 Gene3D G3DSA:3.40.50.2300 60 299 4.6E-59 T 14-10-2018 MC28_4906 f73de76fbb93266767afcb4d4034d617 325 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.2E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_4906 f73de76fbb93266767afcb4d4034d617 325 Gene3D G3DSA:3.40.50.2300 158 285 4.6E-59 T 14-10-2018 MC28_4906 f73de76fbb93266767afcb4d4034d617 325 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 321 6.2E-31 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain MC28_4906 f73de76fbb93266767afcb4d4034d617 325 SMART SM00354 1 71 5.4E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_4137 011089acfc86533b16b571bee3126bab 366 PIRSF PIRSF039004 1 366 1.4E-137 T 14-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 MC28_4137 011089acfc86533b16b571bee3126bab 366 Gene3D G3DSA:2.30.40.10 7 361 3.1E-114 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_4137 011089acfc86533b16b571bee3126bab 366 SUPERFAMILY SSF51338 5 363 2.95E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_4137 011089acfc86533b16b571bee3126bab 366 SUPERFAMILY SSF51556 52 316 3.92E-66 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_4137 011089acfc86533b16b571bee3126bab 366 Gene3D G3DSA:3.20.20.140 52 316 3.1E-114 T 14-10-2018 MC28_4137 011089acfc86533b16b571bee3126bab 366 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 4 364 2.0E-174 T 14-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 MC28_1313 3242cb749786cc4157bc5a553a17ad11 107 Pfam PF13780 Domain of unknown function (DUF4176) 8 82 7.3E-18 T 14-10-2018 IPR025233 Protein of unknown function DUF4176 MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 Gene3D G3DSA:3.40.30.120 401 542 8.0E-37 T 14-10-2018 MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 SUPERFAMILY SSF51905 12 379 1.36E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 Gene3D G3DSA:3.50.50.60 12 368 3.7E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 Gene3D G3DSA:3.30.9.50 79 306 3.7E-105 T 14-10-2018 MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 Pfam PF01494 FAD binding domain 10 373 2.0E-97 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 2.0E-42 T 14-10-2018 MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 342 360 2.0E-42 T 14-10-2018 MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 2.0E-42 T 14-10-2018 MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 324 340 2.0E-42 T 14-10-2018 MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 360 376 2.0E-42 T 14-10-2018 MC28_2652 34bc0956e6666aa2854fe6d21501e423 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 324 2.0E-42 T 14-10-2018 MC28_0906 b235dd93cef4a9261cd9c0e073147493 261 Pfam PF01464 Transglycosylase SLT domain 145 246 1.0E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 MC28_0906 b235dd93cef4a9261cd9c0e073147493 261 Gene3D G3DSA:1.10.530.10 75 258 2.5E-43 T 14-10-2018 MC28_0906 b235dd93cef4a9261cd9c0e073147493 261 SUPERFAMILY SSF53955 136 256 1.32E-39 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 5 571 36.13 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 Pfam PF16582 Middle domain of thiamine pyrophosphate 222 403 7.7E-17 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 176 2.5E-37 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 Gene3D G3DSA:3.40.50.1220 200 380 3.8E-57 T 14-10-2018 MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 SUPERFAMILY SSF52518 14 180 1.28E-34 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 SUPERFAMILY SSF52518 387 571 1.44E-31 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 SUPERFAMILY SSF52467 168 375 8.99E-10 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 PIRSF PIRSF004983 2 578 6.7E-215 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 431 553 4.1E-10 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 Gene3D G3DSA:3.40.50.970 381 580 1.8E-65 T 14-10-2018 MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 Gene3D G3DSA:3.40.50.970 1 175 1.6E-68 T 14-10-2018 MC28_4145 8b7b43df4db3ac9dbc34b5c3d7b34945 584 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 13 446 8.5E-154 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 Gene3D G3DSA:3.90.105.10 26 182 1.2E-115 T 14-10-2018 MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 Gene3D G3DSA:3.40.980.10 183 335 1.2E-115 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 Gene3D G3DSA:2.40.340.10 336 402 1.2E-115 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 Pfam PF03454 MoeA C-terminal region (domain IV) 339 410 6.1E-15 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 SMART SM00852 188 326 1.3E-35 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 Pfam PF03453 MoeA N-terminal region (domain I and II) 7 175 3.1E-38 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 SUPERFAMILY SSF63882 7 184 2.75E-50 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 Pfam PF00994 Probable molybdopterin binding domain 189 325 2.9E-23 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 SUPERFAMILY SSF63867 336 412 4.32E-16 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 185 322 4.0E-30 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 Gene3D G3DSA:2.170.190.11 49 149 1.2E-115 T 14-10-2018 MC28_2715 fc541089a00e2fb232544aeab35e66fb 448 SUPERFAMILY SSF53218 186 327 3.01E-38 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_4798 180edef55a21fefaeed6a76c547e8c73 226 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 220 8.3E-78 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 MC28_4798 180edef55a21fefaeed6a76c547e8c73 226 SUPERFAMILY SSF53448 2 221 2.03E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4798 180edef55a21fefaeed6a76c547e8c73 226 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 221 44.966 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 MC28_4798 180edef55a21fefaeed6a76c547e8c73 226 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 221 5.0E-79 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 MC28_4798 180edef55a21fefaeed6a76c547e8c73 226 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 99 106 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 MC28_4798 180edef55a21fefaeed6a76c547e8c73 226 Gene3D G3DSA:3.90.550.10 1 225 1.8E-83 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4238 0352b7454d6a6109819d9a383808a7b9 298 SUPERFAMILY SSF102114 20 287 4.58E-66 T 14-10-2018 MC28_4238 0352b7454d6a6109819d9a383808a7b9 298 Gene3D G3DSA:3.20.20.70 18 268 4.3E-26 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4238 0352b7454d6a6109819d9a383808a7b9 298 Pfam PF04055 Radical SAM superfamily 64 223 3.3E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_4238 0352b7454d6a6109819d9a383808a7b9 298 Hamap MF_00206 Lipoyl synthase [lipA]. 1 295 146.567 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 MC28_4238 0352b7454d6a6109819d9a383808a7b9 298 PIRSF PIRSF005963 1 298 8.5E-136 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 MC28_4238 0352b7454d6a6109819d9a383808a7b9 298 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 5 45 1.9E-10 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 MC28_4238 0352b7454d6a6109819d9a383808a7b9 298 TIGRFAM TIGR00510 lipA: lipoyl synthase 2 292 2.4E-121 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 MC28_4238 0352b7454d6a6109819d9a383808a7b9 298 SMART SM00729 57 265 9.2E-16 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 SMART SM00956 404 507 2.2E-40 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 SMART SM00490 243 324 1.9E-27 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Gene3D G3DSA:1.10.10.10 334 510 5.9E-46 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Pfam PF00271 Helicase conserved C-terminal domain 218 323 2.9E-18 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Pfam PF00570 HRDC domain 517 582 8.9E-23 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 SUPERFAMILY SSF46785 395 537 5.17E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2005 a4dd754cd2bfff5137401951afde313d 705 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 5 583 1.4E-233 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Pfam PF09382 RQC domain 400 509 1.2E-30 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Gene3D G3DSA:1.10.150.80 511 591 2.9E-25 T 14-10-2018 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 SUPERFAMILY SSF52540 58 345 8.42E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2005 a4dd754cd2bfff5137401951afde313d 705 SMART SM00487 14 211 2.0E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_2005 a4dd754cd2bfff5137401951afde313d 705 SMART SM00341 512 592 2.7E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Gene3D G3DSA:3.40.50.300 203 333 1.8E-40 T 14-10-2018 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Pfam PF14493 Helix-turn-helix domain 614 701 6.4E-26 T 14-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 453 2.5E-145 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Pfam PF16124 RecQ zinc-binding 336 396 4.1E-16 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Gene3D G3DSA:3.40.50.300 1 202 9.9E-76 T 14-10-2018 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 Pfam PF00270 DEAD/DEAH box helicase 21 181 7.1E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MC28_2005 a4dd754cd2bfff5137401951afde313d 705 SUPERFAMILY SSF47819 515 589 3.92E-24 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 MC28_4922 03663957234be35463f87d3f360a28be 321 SUPERFAMILY SSF52540 40 317 1.04E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4922 03663957234be35463f87d3f360a28be 321 Pfam PF00005 ABC transporter 33 184 1.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4922 03663957234be35463f87d3f360a28be 321 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4922 03663957234be35463f87d3f360a28be 321 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 1.6E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_4922 03663957234be35463f87d3f360a28be 321 Gene3D G3DSA:3.40.50.300 3 321 4.1E-102 T 14-10-2018 MC28_4922 03663957234be35463f87d3f360a28be 321 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 4.9E-29 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_4922 03663957234be35463f87d3f360a28be 321 SMART SM00382 41 233 8.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4635 0f558eff77439bd472d69ada757f8dbf 325 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 307 3.2E-25 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain MC28_4635 0f558eff77439bd472d69ada757f8dbf 325 Gene3D G3DSA:3.40.50.2300 60 300 7.9E-58 T 14-10-2018 MC28_4635 0f558eff77439bd472d69ada757f8dbf 325 SMART SM00354 1 71 3.2E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_4635 0f558eff77439bd472d69ada757f8dbf 325 Gene3D G3DSA:3.40.50.2300 158 285 7.9E-58 T 14-10-2018 MC28_4635 0f558eff77439bd472d69ada757f8dbf 325 SUPERFAMILY SSF47413 1 60 3.02E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_4635 0f558eff77439bd472d69ada757f8dbf 325 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.2E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_4635 0f558eff77439bd472d69ada757f8dbf 325 SUPERFAMILY SSF53822 61 325 7.92E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_4635 0f558eff77439bd472d69ada757f8dbf 325 Gene3D G3DSA:1.10.260.40 2 59 2.4E-19 T 14-10-2018 MC28_2064 1c767d272cc535d8b37070041c767492 73 SUPERFAMILY SSF52499 12 66 4.32E-8 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_2064 1c767d272cc535d8b37070041c767492 73 Gene3D G3DSA:3.40.50.850 3 71 1.1E-9 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_1883 7f4fd8b934dfe28213fac2b1d0f28a42 147 Pfam PF00293 NUDIX domain 7 114 4.5E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_1883 7f4fd8b934dfe28213fac2b1d0f28a42 147 PRINTS PR00502 NUDIX hydrolase family signature 46 61 1.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_1883 7f4fd8b934dfe28213fac2b1d0f28a42 147 PRINTS PR00502 NUDIX hydrolase family signature 32 46 1.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_1883 7f4fd8b934dfe28213fac2b1d0f28a42 147 SUPERFAMILY SSF55811 5 121 8.53E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_1883 7f4fd8b934dfe28213fac2b1d0f28a42 147 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_1883 7f4fd8b934dfe28213fac2b1d0f28a42 147 Gene3D G3DSA:3.90.79.10 1 137 1.0E-27 T 14-10-2018 MC28_3069 dbf5cc8c6be32e618f98786d5d4640b0 110 SUPERFAMILY SSF88659 1 102 2.24E-34 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_3069 dbf5cc8c6be32e618f98786d5d4640b0 110 Gene3D G3DSA:1.10.10.10 1 109 1.3E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3069 dbf5cc8c6be32e618f98786d5d4640b0 110 Hamap MF_00245 UPF0122 protein . 2 103 22.409 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like MC28_3069 dbf5cc8c6be32e618f98786d5d4640b0 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 2 101 8.4E-41 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like MC28_3441 3b3855bf7a8071507680fa3cb4847a7f 186 Gene3D G3DSA:2.40.440.10 14 177 1.2E-43 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like MC28_3441 3b3855bf7a8071507680fa3cb4847a7f 186 Pfam PF03734 L,D-transpeptidase catalytic domain 28 151 3.6E-23 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 MC28_3441 3b3855bf7a8071507680fa3cb4847a7f 186 SUPERFAMILY SSF141523 26 151 3.27E-33 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like MC28_0205 f44a074b9f4b94fcb30fcdfacadd518d 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 62 84 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MC28_0205 f44a074b9f4b94fcb30fcdfacadd518d 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 21 84 1.4E-15 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MC28_0205 f44a074b9f4b94fcb30fcdfacadd518d 194 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 26 178 6.6E-55 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 MC28_0205 f44a074b9f4b94fcb30fcdfacadd518d 194 Gene3D G3DSA:1.20.120.1760 1 181 1.1E-17 T 14-10-2018 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 1 581 2.9E-248 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Gene3D G3DSA:1.10.460.10 105 520 2.3E-167 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Gene3D G3DSA:3.40.50.140 1 104 5.4E-37 T 14-10-2018 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 SMART SM00493 1 73 4.5E-4 T 14-10-2018 IPR006171 TOPRIM domain MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Pfam PF01131 DNA topoisomerase 98 517 1.3E-136 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 613 52.506 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 SUPERFAMILY SSF56712 1 559 1.14E-187 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Gene3D G3DSA:1.10.290.10 220 355 2.3E-167 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 249 272 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 SUPERFAMILY SSF57783 546 583 2.21E-13 T 14-10-2018 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Gene3D G3DSA:3.30.65.10 529 588 3.9E-14 T 14-10-2018 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Gene3D G3DSA:2.70.20.10 154 427 2.3E-167 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 SMART SM00436 74 162 3.6E-53 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Pfam PF01751 Toprim domain 1 83 4.5E-17 T 14-10-2018 IPR006171 TOPRIM domain MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 587 626 1.4E-11 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 546 583 4.9E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 628 656 0.022 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 47 60 3.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 340 356 3.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 443 457 3.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 263 272 3.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 132 150 3.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_3056 3271a9ef0e17822f330a71615fca1ed9 662 SMART SM00437 212 480 1.3E-121 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Gene3D G3DSA:3.90.1100.10 23 156 3.9E-56 T 14-10-2018 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Gene3D G3DSA:3.90.1800.10 1059 1111 1.3E-10 T 14-10-2018 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Pfam PF10385 RNA polymerase beta subunit external 1 domain 549 616 5.3E-24 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 SUPERFAMILY SSF64484 16 1159 0.0 T 14-10-2018 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Gene3D G3DSA:3.90.1110.10 157 267 4.6E-7 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Gene3D G3DSA:2.40.270.10 984 1049 1.7E-24 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Pfam PF00562 RNA polymerase Rpb2, domain 6 678 1071 2.7E-162 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Pfam PF04561 RNA polymerase Rpb2, domain 2 143 293 6.5E-27 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Pfam PF04561 RNA polymerase Rpb2, domain 2 376 412 5.3E-6 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 ProSitePatterns PS01166 RNA polymerases beta chain signature. 924 936 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Gene3D G3DSA:3.90.1100.10 392 593 4.6E-75 T 14-10-2018 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Gene3D G3DSA:2.40.270.10 754 792 3.3E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Pfam PF04565 RNA polymerase Rpb2, domain 3 471 539 1.3E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Gene3D G3DSA:3.90.1100.10 603 673 1.3E-19 T 14-10-2018 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Pfam PF04560 RNA polymerase Rpb2, domain 7 1073 1148 1.7E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Pfam PF04563 RNA polymerase beta subunit 31 456 5.6E-31 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 207 898 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Gene3D G3DSA:2.40.50.100 674 753 4.8E-26 T 14-10-2018 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 18 1149 12.6 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4814 5bf19074a454fd397c4fc29f930994a0 1180 Gene3D G3DSA:2.40.50.150 793 932 2.8E-60 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 Gene3D G3DSA:3.40.710.10 8 286 7.3E-94 T 14-10-2018 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 103 120 2.4E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 46 57 2.4E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 143 2.4E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 388 5.3E-15 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 SUPERFAMILY SSF69189 278 373 1.04E-16 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 SMART SM00936 286 388 7.7E-18 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 12 265 1.3E-84 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 Gene3D G3DSA:2.60.410.10 287 388 3.7E-17 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_4729 3b9ca2e693ac6d5affe0030ea0b291a1 418 SUPERFAMILY SSF56601 14 286 1.02E-76 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1850 1f5d18df4debebbabdf1cbe9ac88613b 329 SUPERFAMILY SSF50129 1 162 1.31E-29 T 14-10-2018 IPR011032 GroES-like superfamily MC28_1850 1f5d18df4debebbabdf1cbe9ac88613b 329 SUPERFAMILY SSF51735 133 301 1.74E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1850 1f5d18df4debebbabdf1cbe9ac88613b 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 124 3.3E-12 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_1850 1f5d18df4debebbabdf1cbe9ac88613b 329 Pfam PF00107 Zinc-binding dehydrogenase 169 290 3.2E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MC28_1850 1f5d18df4debebbabdf1cbe9ac88613b 329 Gene3D G3DSA:3.40.50.720 139 276 3.7E-85 T 14-10-2018 MC28_1850 1f5d18df4debebbabdf1cbe9ac88613b 329 SMART SM00829 11 326 5.9E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_1850 1f5d18df4debebbabdf1cbe9ac88613b 329 Gene3D G3DSA:3.90.180.10 24 319 3.7E-85 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 SUPERFAMILY SSF81665 259 485 2.62E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00943 Copper-transporting ATPase signature 118 138 9.2E-17 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00943 Copper-transporting ATPase signature 286 304 9.2E-17 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00943 Copper-transporting ATPase signature 419 433 9.2E-17 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00943 Copper-transporting ATPase signature 674 691 9.2E-17 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00943 Copper-transporting ATPase signature 481 496 9.2E-17 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00943 Copper-transporting ATPase signature 214 233 9.2E-17 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00943 Copper-transporting ATPase signature 266 285 9.2E-17 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 SUPERFAMILY SSF56784 496 797 4.01E-62 T 14-10-2018 IPR036412 HAD-like superfamily MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 Pfam PF00122 E1-E2 ATPase 297 476 2.1E-59 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 74 138 5.7E-14 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 8 70 7.4E-9 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 Pfam PF00403 Heavy-metal-associated domain 77 137 1.1E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 Pfam PF00403 Heavy-metal-associated domain 9 68 9.0E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 Gene3D G3DSA:3.40.1110.10 509 629 2.3E-97 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 633 2.1E-28 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 346 360 2.1E-28 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 512 2.1E-28 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 2.1E-28 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 2.1E-28 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 2.1E-28 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 269 784 1.5E-94 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 SUPERFAMILY SSF55008 74 144 4.19E-21 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 Gene3D G3DSA:2.70.150.20 289 401 4.6E-44 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 211 800 1.3E-186 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 Gene3D G3DSA:3.40.50.1000 479 749 2.3E-97 T 14-10-2018 IPR023214 HAD superfamily MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 SUPERFAMILY SSF81653 300 396 5.89E-31 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 SUPERFAMILY SSF55008 3 71 8.77E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 40 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 500 506 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 Gene3D G3DSA:3.30.70.100 73 148 9.5E-24 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 229 799 2.7E-203 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 Pfam PF00702 haloacid dehalogenase-like hydrolase 495 711 2.5E-48 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00942 Copper-transporting ATPase 1 signature 32 55 3.1E-15 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00942 Copper-transporting ATPase 1 signature 212 237 3.1E-15 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 PRINTS PR00942 Copper-transporting ATPase 1 signature 6 31 3.1E-15 T 14-10-2018 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 ProSitePatterns PS01047 Heavy-metal-associated domain. 79 108 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 MC28_2894 3ed9426351c32289c5846af1ea0b90e9 805 Gene3D G3DSA:3.30.70.100 1 72 3.9E-22 T 14-10-2018 MC28_0185 0cb52652d03b7f5c7c56082bf1533bff 424 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 1 421 4.8E-123 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 MC28_0185 0cb52652d03b7f5c7c56082bf1533bff 424 SUPERFAMILY SSF48024 1 97 3.14E-19 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 MC28_0185 0cb52652d03b7f5c7c56082bf1533bff 424 SUPERFAMILY SSF52540 162 415 2.44E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0185 0cb52652d03b7f5c7c56082bf1533bff 424 Pfam PF00772 DnaB-like helicase N terminal domain 1 94 1.4E-18 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 MC28_0185 0cb52652d03b7f5c7c56082bf1533bff 424 Pfam PF03796 DnaB-like helicase C terminal domain 163 420 1.3E-92 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 MC28_0185 0cb52652d03b7f5c7c56082bf1533bff 424 Gene3D G3DSA:3.40.50.300 140 423 4.7E-101 T 14-10-2018 MC28_0185 0cb52652d03b7f5c7c56082bf1533bff 424 Gene3D G3DSA:1.10.860.10 1 135 1.5E-29 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal MC28_5381 bfdb6f76c95f21031c050e8f8ad54a17 483 Pfam PF01740 STAS domain 394 471 1.6E-5 T 14-10-2018 IPR002645 STAS domain MC28_5381 bfdb6f76c95f21031c050e8f8ad54a17 483 Gene3D G3DSA:3.30.750.24 382 478 2.5E-27 T 14-10-2018 IPR036513 STAS domain superfamily MC28_5381 bfdb6f76c95f21031c050e8f8ad54a17 483 SUPERFAMILY SSF52091 387 471 2.55E-10 T 14-10-2018 IPR036513 STAS domain superfamily MC28_5381 bfdb6f76c95f21031c050e8f8ad54a17 483 Pfam PF00916 Sulfate permease family 14 139 8.2E-25 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 MC28_5381 bfdb6f76c95f21031c050e8f8ad54a17 483 Pfam PF00916 Sulfate permease family 143 354 3.2E-32 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 MC28_0791 f5faf42e2645c8e192dfa897ec8631d3 138 Pfam PF11122 Inner spore coat protein D 22 115 2.9E-23 T 14-10-2018 IPR020108 Spore coat protein CotD MC28_0791 f5faf42e2645c8e192dfa897ec8631d3 138 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 22 72 1.0E-20 T 14-10-2018 IPR020108 Spore coat protein CotD MC28_E145 d8d471bd789291e7e4f7fcf937a4208b 428 Gene3D G3DSA:3.40.50.1000 273 421 1.2E-26 T 14-10-2018 IPR023214 HAD superfamily MC28_E145 d8d471bd789291e7e4f7fcf937a4208b 428 SUPERFAMILY SSF56784 272 377 2.99E-13 T 14-10-2018 IPR036412 HAD-like superfamily MC28_E145 d8d471bd789291e7e4f7fcf937a4208b 428 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 276 383 1.8E-11 T 14-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 Pfam PF00512 His Kinase A (phospho-acceptor) domain 395 458 2.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 SMART SM00387 503 614 2.6E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 505 598 4.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 SMART SM00388 394 458 9.4E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 Gene3D G3DSA:1.20.1480.50 283 377 9.8E-12 T 14-10-2018 MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 554 2.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 568 2.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 593 2.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 SUPERFAMILY SSF55874 448 611 6.94E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 SMART SM00304 320 372 5.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 Gene3D G3DSA:1.10.287.130 385 460 7.5E-20 T 14-10-2018 MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 SUPERFAMILY SSF47384 380 458 2.35E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 Gene3D G3DSA:3.30.565.10 461 615 1.2E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0697 a45c8586ca01f960e3eb721f02a6d6bb 617 SUPERFAMILY SSF158472 321 371 4.45E-8 T 14-10-2018 MC28_3039 266a196df61f2ce62562d164315146eb 368 Gene3D G3DSA:3.30.1480.10 1 124 3.6E-48 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 MC28_3039 266a196df61f2ce62562d164315146eb 368 SMART SM00322 229 292 0.031 T 14-10-2018 IPR004087 K Homology domain GO:0003676 MC28_3039 266a196df61f2ce62562d164315146eb 368 SMART SM00322 300 368 0.25 T 14-10-2018 IPR004087 K Homology domain GO:0003676 MC28_3039 266a196df61f2ce62562d164315146eb 368 Gene3D G3DSA:3.30.300.20 277 367 1.3E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_3039 266a196df61f2ce62562d164315146eb 368 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 1.0E-127 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 MC28_3039 266a196df61f2ce62562d164315146eb 368 SUPERFAMILY SSF50249 132 198 1.23E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3039 266a196df61f2ce62562d164315146eb 368 Pfam PF00575 S1 RNA binding domain 133 195 1.4E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 MC28_3039 266a196df61f2ce62562d164315146eb 368 SMART SM00316 133 199 9.3E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_3039 266a196df61f2ce62562d164315146eb 368 SUPERFAMILY SSF54814 278 342 8.5E-17 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 MC28_3039 266a196df61f2ce62562d164315146eb 368 Gene3D G3DSA:3.30.300.20 198 276 3.5E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_3039 266a196df61f2ce62562d164315146eb 368 Pfam PF13184 NusA-like KH domain 229 296 2.5E-26 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 MC28_3039 266a196df61f2ce62562d164315146eb 368 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 367 30.5 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 MC28_3039 266a196df61f2ce62562d164315146eb 368 SUPERFAMILY SSF54814 199 277 8.5E-30 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 MC28_3039 266a196df61f2ce62562d164315146eb 368 Pfam PF08529 NusA N-terminal domain 4 123 2.6E-43 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 MC28_3039 266a196df61f2ce62562d164315146eb 368 SUPERFAMILY SSF69705 1 126 4.58E-43 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 MC28_3039 266a196df61f2ce62562d164315146eb 368 Gene3D G3DSA:2.40.50.140 136 197 9.7E-24 T 14-10-2018 MC28_3385 9e3bef5d92c12339bd6f5032f76c6d55 215 PIRSF PIRSF038973 2 213 3.4E-70 T 14-10-2018 IPR014196 Stage II sporulation protein M MC28_3385 9e3bef5d92c12339bd6f5032f76c6d55 215 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 9 206 5.3E-81 T 14-10-2018 IPR014196 Stage II sporulation protein M MC28_3385 9e3bef5d92c12339bd6f5032f76c6d55 215 Pfam PF01944 Stage II sporulation protein M 26 202 1.6E-21 T 14-10-2018 IPR002798 Stage II sporulation protein M-like MC28_5117 080dbe91d76799ad4e6c84027ef3ce2b 427 SUPERFAMILY SSF103473 16 413 1.31E-37 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_5117 080dbe91d76799ad4e6c84027ef3ce2b 427 Gene3D G3DSA:1.20.1250.20 226 414 1.7E-19 T 14-10-2018 MC28_5117 080dbe91d76799ad4e6c84027ef3ce2b 427 Gene3D G3DSA:1.20.1250.20 11 204 6.2E-7 T 14-10-2018 MC28_5117 080dbe91d76799ad4e6c84027ef3ce2b 427 Pfam PF11700 Vacuole effluxer Atg22 like 9 411 4.9E-56 T 14-10-2018 IPR024671 Autophagy-related protein 22-like MC28_F049 2872ab4c8c907c41306f52c211fd61a6 149 Pfam PF04055 Radical SAM superfamily 20 108 4.5E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_F049 2872ab4c8c907c41306f52c211fd61a6 149 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 3 149 9.4E-50 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 MC28_F049 2872ab4c8c907c41306f52c211fd61a6 149 Gene3D G3DSA:3.20.20.70 1 149 1.1E-34 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_F049 2872ab4c8c907c41306f52c211fd61a6 149 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 MC28_F049 2872ab4c8c907c41306f52c211fd61a6 149 Pfam PF13353 4Fe-4S single cluster domain 12 146 2.2E-37 T 14-10-2018 MC28_F049 2872ab4c8c907c41306f52c211fd61a6 149 PIRSF PIRSF000368 1 149 1.4E-52 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 MC28_F049 2872ab4c8c907c41306f52c211fd61a6 149 SUPERFAMILY SSF102114 22 101 6.02E-10 T 14-10-2018 MC28_5007 ec3b98b61f9dde479b20cd3317c2c236 211 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 2 202 7.0E-89 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_5007 ec3b98b61f9dde479b20cd3317c2c236 211 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 18 186 4.7E-40 T 14-10-2018 MC28_5007 ec3b98b61f9dde479b20cd3317c2c236 211 PIRSF PIRSF001586 1 206 5.8E-84 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_5007 ec3b98b61f9dde479b20cd3317c2c236 211 SMART SM01211 1 203 1.7E-116 T 14-10-2018 MC28_5007 ec3b98b61f9dde479b20cd3317c2c236 211 SUPERFAMILY SSF52317 8 203 1.2E-69 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_5007 ec3b98b61f9dde479b20cd3317c2c236 211 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 201 38.721 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 MC28_5007 ec3b98b61f9dde479b20cd3317c2c236 211 Gene3D G3DSA:3.40.50.880 1 204 4.1E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4951 aa230f2d4cb89f2219116f875e20701a 209 Pfam PF02629 CoA binding domain 82 177 6.7E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 MC28_4951 aa230f2d4cb89f2219116f875e20701a 209 SUPERFAMILY SSF46785 7 78 5.9E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4951 aa230f2d4cb89f2219116f875e20701a 209 Pfam PF06971 Putative DNA-binding protein N-terminus 5 53 3.5E-18 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 MC28_4951 aa230f2d4cb89f2219116f875e20701a 209 Gene3D G3DSA:3.40.50.720 81 208 8.4E-46 T 14-10-2018 MC28_4951 aa230f2d4cb89f2219116f875e20701a 209 SUPERFAMILY SSF51735 82 206 3.94E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4951 aa230f2d4cb89f2219116f875e20701a 209 SMART SM00881 79 179 2.3E-19 T 14-10-2018 IPR003781 CoA-binding GO:0048037 MC28_4951 aa230f2d4cb89f2219116f875e20701a 209 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 1 208 38.804 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 MC28_4951 aa230f2d4cb89f2219116f875e20701a 209 Gene3D G3DSA:1.10.10.10 1 80 4.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3122 6f05a65ae2d97129ab2e16f31cf527a4 224 PIRSF PIRSF004848 1 224 7.1E-64 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 MC28_3122 6f05a65ae2d97129ab2e16f31cf527a4 224 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 223 27.062 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 MC28_3122 6f05a65ae2d97129ab2e16f31cf527a4 224 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 222 7.9E-49 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 MC28_3122 6f05a65ae2d97129ab2e16f31cf527a4 224 Pfam PF01168 Alanine racemase, N-terminal domain 12 222 2.0E-17 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_3122 6f05a65ae2d97129ab2e16f31cf527a4 224 SUPERFAMILY SSF51419 2 222 4.97E-68 T 14-10-2018 IPR029066 PLP-binding barrel MC28_3122 6f05a65ae2d97129ab2e16f31cf527a4 224 Gene3D G3DSA:3.20.20.10 1 224 6.4E-70 T 14-10-2018 IPR029066 PLP-binding barrel MC28_3122 6f05a65ae2d97129ab2e16f31cf527a4 224 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 74 88 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 MC28_F117 8279b4fe21a987b16b82b5a01304d1e8 78 SUPERFAMILY SSF56959 3 60 1.44E-9 T 14-10-2018 IPR036435 Leukocidin/porin MspA superfamily MC28_F117 8279b4fe21a987b16b82b5a01304d1e8 78 Gene3D G3DSA:2.70.240.10 1 73 1.2E-15 T 14-10-2018 MC28_F117 8279b4fe21a987b16b82b5a01304d1e8 78 Pfam PF07968 Leukocidin/Hemolysin toxin family 3 58 6.6E-9 T 14-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 Gene3D G3DSA:2.100.10.10 373 559 6.2E-91 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 SUPERFAMILY SSF51096 363 561 3.31E-32 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 SUPERFAMILY SSF56849 75 359 1.15E-52 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 Pfam PF03944 delta endotoxin 578 717 6.1E-31 T 14-10-2018 IPR005638 Pesticidal crystal protein, C-terminal GO:0090729 MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 Gene3D G3DSA:1.20.190.10 107 359 4.9E-60 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 Pfam PF03945 delta endotoxin, N-terminal domain 182 266 1.5E-5 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 Pfam PF03945 delta endotoxin, N-terminal domain 297 359 1.7E-7 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 Pfam PF00555 delta endotoxin 367 560 8.3E-29 T 14-10-2018 IPR001178 Pesticidal crystal protein, central domain GO:0005102|GO:0009405 MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 SUPERFAMILY SSF49785 570 718 6.23E-30 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E085 28bcf6945fdca2ad99c21fa615182305 743 Gene3D G3DSA:2.60.120.260 368 719 6.2E-91 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_G179 e7b312232b81e2eb18d90b2c876a4964 665 Pfam PF00754 F5/8 type C domain 538 658 2.6E-24 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain MC28_G179 e7b312232b81e2eb18d90b2c876a4964 665 SUPERFAMILY SSF49785 529 663 6.59E-38 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_G179 e7b312232b81e2eb18d90b2c876a4964 665 PIRSF PIRSF036597 16 555 8.4E-186 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related MC28_G179 e7b312232b81e2eb18d90b2c876a4964 665 PIRSF PIRSF036597 550 591 0.014 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related MC28_G179 e7b312232b81e2eb18d90b2c876a4964 665 PIRSF PIRSF036597 586 650 6.2E-6 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related MC28_G179 e7b312232b81e2eb18d90b2c876a4964 665 Gene3D G3DSA:2.60.120.260 507 663 1.6E-46 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_G179 e7b312232b81e2eb18d90b2c876a4964 665 SUPERFAMILY SSF55486 321 363 7.03E-6 T 14-10-2018 MC28_G179 e7b312232b81e2eb18d90b2c876a4964 665 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 162 443 4.8E-62 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 MC28_1960 7717e9b20b794cf96e6c5c8aac1611ea 261 SMART SM01134 74 232 3.5E-37 T 14-10-2018 MC28_1960 7717e9b20b794cf96e6c5c8aac1611ea 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.5E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_1960 7717e9b20b794cf96e6c5c8aac1611ea 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.5E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_1960 7717e9b20b794cf96e6c5c8aac1611ea 261 SUPERFAMILY SSF100950 82 231 7.79E-20 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_1960 7717e9b20b794cf96e6c5c8aac1611ea 261 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 2.7E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_1960 7717e9b20b794cf96e6c5c8aac1611ea 261 SMART SM00420 6 58 7.4E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_1960 7717e9b20b794cf96e6c5c8aac1611ea 261 SUPERFAMILY SSF46785 4 59 1.53E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1960 7717e9b20b794cf96e6c5c8aac1611ea 261 Gene3D G3DSA:1.10.10.10 1 94 1.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1960 7717e9b20b794cf96e6c5c8aac1611ea 261 Pfam PF00455 DeoR C terminal sensor domain 82 231 1.2E-30 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain MC28_4698 750178edcc9751b41fa74cef55d2aaa6 234 Pfam PF00072 Response regulator receiver domain 5 114 6.2E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4698 750178edcc9751b41fa74cef55d2aaa6 234 SUPERFAMILY SSF46894 129 229 6.12E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_4698 750178edcc9751b41fa74cef55d2aaa6 234 SMART SM00448 3 113 1.8E-48 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4698 750178edcc9751b41fa74cef55d2aaa6 234 Gene3D G3DSA:3.40.50.2300 1 130 3.6E-42 T 14-10-2018 MC28_4698 750178edcc9751b41fa74cef55d2aaa6 234 SUPERFAMILY SSF52172 2 122 8.97E-45 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4698 750178edcc9751b41fa74cef55d2aaa6 234 SMART SM00862 152 228 1.6E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4698 750178edcc9751b41fa74cef55d2aaa6 234 Gene3D G3DSA:1.10.10.10 131 234 5.1E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4698 750178edcc9751b41fa74cef55d2aaa6 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 9.1E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3958 65621d65e5b98ce55b6a958bc70154ae 338 PIRSF PIRSF012509 1 119 5.2E-26 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 MC28_3958 65621d65e5b98ce55b6a958bc70154ae 338 PIRSF PIRSF012509 114 338 5.2E-68 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 MC28_3958 65621d65e5b98ce55b6a958bc70154ae 338 Gene3D G3DSA:3.30.300.190 222 338 2.9E-40 T 14-10-2018 MC28_3958 65621d65e5b98ce55b6a958bc70154ae 338 Pfam PF07537 CamS sex pheromone cAM373 precursor 118 331 1.5E-46 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 MC28_3958 65621d65e5b98ce55b6a958bc70154ae 338 Pfam PF07537 CamS sex pheromone cAM373 precursor 68 114 3.3E-6 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 MC28_3958 65621d65e5b98ce55b6a958bc70154ae 338 Gene3D G3DSA:3.10.570.10 52 221 1.9E-56 T 14-10-2018 MC28_3760 9b2b79c0df0da873cfa34c60c379da7b 138 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 137 1.8E-56 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 MC28_3760 9b2b79c0df0da873cfa34c60c379da7b 138 Gene3D G3DSA:2.20.25.10 1 44 3.0E-19 T 14-10-2018 MC28_3760 9b2b79c0df0da873cfa34c60c379da7b 138 SUPERFAMILY SSF82784 1 137 4.32E-43 T 14-10-2018 IPR036102 OsmC/Ohr superfamily MC28_3760 9b2b79c0df0da873cfa34c60c379da7b 138 Gene3D G3DSA:3.30.300.20 45 138 1.5E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_3760 9b2b79c0df0da873cfa34c60c379da7b 138 Pfam PF02566 OsmC-like protein 40 135 1.1E-18 T 14-10-2018 IPR003718 OsmC/Ohr family MC28_0246 5ab89a190b1a09befa8d4785bc49961d 67 Pfam PF13220 Protein of unknown function (DUF4028) 1 65 1.1E-47 T 14-10-2018 IPR025106 Protein of unknown function DUF4028 MC28_0508 fdbe1625bc985a997b0e7ee915683e9f 409 Pfam PF13256 Domain of unknown function (DUF4047) 33 157 3.0E-64 T 14-10-2018 IPR025120 Domain of unknown function DUF4047 MC28_2329 868a8b0655867d0d96ef8be9190b5b0e 145 SUPERFAMILY SSF54593 1 120 2.28E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2329 868a8b0655867d0d96ef8be9190b5b0e 145 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 115 3.3E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_2329 868a8b0655867d0d96ef8be9190b5b0e 145 Gene3D G3DSA:3.10.180.10 1 123 1.4E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_C085 6fbc487452176192e53068d75719d819 738 Pfam PF00005 ABC transporter 497 647 2.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_C085 6fbc487452176192e53068d75719d819 738 SUPERFAMILY SSF90123 152 463 8.24E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_C085 6fbc487452176192e53068d75719d819 738 Pfam PF00664 ABC transporter transmembrane region 167 433 2.6E-46 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 MC28_C085 6fbc487452176192e53068d75719d819 738 Gene3D G3DSA:1.20.1560.10 148 465 1.9E-91 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_C085 6fbc487452176192e53068d75719d819 738 Gene3D G3DSA:3.90.70.10 1 147 2.7E-53 T 14-10-2018 MC28_C085 6fbc487452176192e53068d75719d819 738 Pfam PF03412 Peptidase C39 family 4 137 1.8E-39 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 MC28_C085 6fbc487452176192e53068d75719d819 738 ProSitePatterns PS00211 ABC transporters family signature. 619 633 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_C085 6fbc487452176192e53068d75719d819 738 Gene3D G3DSA:3.40.50.300 471 729 2.8E-92 T 14-10-2018 MC28_C085 6fbc487452176192e53068d75719d819 738 SUPERFAMILY SSF52540 472 718 3.34E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_C085 6fbc487452176192e53068d75719d819 738 SMART SM00382 506 694 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_C085 6fbc487452176192e53068d75719d819 738 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 10 716 4.2E-212 T 14-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 MC28_0200 1b6fc20d70b6cff7143fad167ab01d8a 118 Pfam PF14078 Domain of unknown function (DUF4259) 2 108 8.0E-6 T 14-10-2018 IPR025355 Protein of unknown function DUF4259 MC28_2972 fee92fa82d56cb7f4b9e64d144889b71 446 Pfam PF01391 Collagen triple helix repeat (20 copies) 39 96 5.7E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_2972 fee92fa82d56cb7f4b9e64d144889b71 446 Pfam PF01391 Collagen triple helix repeat (20 copies) 216 274 2.0E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_4719 5fe7bcc490c41a52ef22a58de50a5165 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 5 115 20.309 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 MC28_4719 5fe7bcc490c41a52ef22a58de50a5165 119 Pfam PF00825 Ribonuclease P 5 111 2.9E-36 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 MC28_4719 5fe7bcc490c41a52ef22a58de50a5165 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 55 69 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 MC28_4719 5fe7bcc490c41a52ef22a58de50a5165 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 11 118 3.0E-55 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 MC28_4719 5fe7bcc490c41a52ef22a58de50a5165 119 SUPERFAMILY SSF54211 5 113 2.53E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_4719 5fe7bcc490c41a52ef22a58de50a5165 119 Gene3D G3DSA:3.30.230.10 3 119 5.1E-38 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_4719 5fe7bcc490c41a52ef22a58de50a5165 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 112 1.2E-32 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 MC28_4787 0462520c14323987ae9742f6293f23b3 112 SMART SM00905 1 109 3.3E-41 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 MC28_4787 0462520c14323987ae9742f6293f23b3 112 Pfam PF02152 Dihydroneopterin aldolase 1 108 7.5E-33 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 MC28_4787 0462520c14323987ae9742f6293f23b3 112 Gene3D G3DSA:3.30.1130.10 1 112 5.0E-42 T 14-10-2018 MC28_4787 0462520c14323987ae9742f6293f23b3 112 SUPERFAMILY SSF55620 1 111 2.33E-35 T 14-10-2018 MC28_4787 0462520c14323987ae9742f6293f23b3 112 TIGRFAM TIGR00526 folB_dom: FolB domain 1 111 2.4E-33 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 MC28_4787 0462520c14323987ae9742f6293f23b3 112 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 1 109 1.9E-39 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 MC28_0117 44c27ac9b7aabb0003bf6f03216b1f17 179 SUPERFAMILY SSF54427 57 176 1.44E-28 T 14-10-2018 IPR032710 NTF2-like domain superfamily MC28_0117 44c27ac9b7aabb0003bf6f03216b1f17 179 Gene3D G3DSA:3.10.450.50 21 179 2.2E-53 T 14-10-2018 MC28_0117 44c27ac9b7aabb0003bf6f03216b1f17 179 Pfam PF07366 SnoaL-like polyketide cyclase 59 173 3.2E-31 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 Gene3D G3DSA:1.25.40.20 83 279 7.6E-52 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 PRINTS PR01415 Ankyrin repeat signature 236 250 3.8E-7 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 PRINTS PR01415 Ankyrin repeat signature 182 197 3.8E-7 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 SMART SM00248 115 144 0.012 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 SMART SM00248 148 177 0.53 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 SMART SM00248 215 249 1.4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 SMART SM00248 181 211 0.042 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 SMART SM00248 253 283 420.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 SMART SM00248 82 111 1600.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 Pfam PF12796 Ankyrin repeats (3 copies) 156 250 3.6E-14 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain MC28_5286 fafa58532476c7e9783ec65fdbd6b42d 290 SUPERFAMILY SSF48403 86 278 3.48E-48 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily MC28_4833 58eb0371898030313e2cb82b106fae0f 103 SMART SM00739 2 29 4.8E-4 T 14-10-2018 IPR005824 KOW MC28_4833 58eb0371898030313e2cb82b106fae0f 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 4.2E-42 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4833 58eb0371898030313e2cb82b106fae0f 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 99 4.9E-33 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4833 58eb0371898030313e2cb82b106fae0f 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4833 58eb0371898030313e2cb82b106fae0f 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 23.712 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4833 58eb0371898030313e2cb82b106fae0f 103 Pfam PF00467 KOW motif 5 36 2.8E-6 T 14-10-2018 IPR005824 KOW MC28_4833 58eb0371898030313e2cb82b106fae0f 103 SUPERFAMILY SSF50104 1 99 1.96E-40 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily MC28_4833 58eb0371898030313e2cb82b106fae0f 103 Gene3D G3DSA:2.30.30.30 1 100 4.5E-44 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 MC28_0548 d8c500646f5647072c2616a1aa4cd85a 449 Pfam PF02386 Cation transport protein 40 429 8.1E-61 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 Pfam PF00672 HAMP domain 196 243 2.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 Gene3D G3DSA:1.10.287.130 251 321 3.8E-20 T 14-10-2018 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 SUPERFAMILY SSF158472 196 246 4.05E-11 T 14-10-2018 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 SMART SM00387 368 481 4.7E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 SUPERFAMILY SSF55874 311 477 4.32E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 478 1.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 SMART SM00388 255 322 5.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 3.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 SUPERFAMILY SSF47384 242 322 3.73E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 SMART SM00304 195 247 3.3E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 Gene3D G3DSA:1.20.1480.50 159 250 2.0E-16 T 14-10-2018 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 320 8.6E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_3949 22034fa89e5c3d89d600dd0b353ae244 485 Gene3D G3DSA:3.30.565.10 327 479 2.9E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0261 6a7c63a80252763bc4b7e62d3f9d8b7b 364 SUPERFAMILY SSF48452 124 265 4.56E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0261 6a7c63a80252763bc4b7e62d3f9d8b7b 364 Gene3D G3DSA:1.25.40.10 2 364 1.3E-92 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_5335 1746463cc750230cf7a009351077865c 480 SUPERFAMILY SSF48557 9 466 3.77E-148 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 MC28_5335 1746463cc750230cf7a009351077865c 480 Gene3D G3DSA:1.10.40.30 412 463 7.5E-24 T 14-10-2018 MC28_5335 1746463cc750230cf7a009351077865c 480 ProSitePatterns PS00163 Fumarate lyases signature. 321 330 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 MC28_5335 1746463cc750230cf7a009351077865c 480 PRINTS PR00145 Argininosuccinate lyase family signature 179 199 7.6E-6 T 14-10-2018 MC28_5335 1746463cc750230cf7a009351077865c 480 PRINTS PR00145 Argininosuccinate lyase family signature 321 337 7.6E-6 T 14-10-2018 MC28_5335 1746463cc750230cf7a009351077865c 480 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family MC28_5335 1746463cc750230cf7a009351077865c 480 PRINTS PR00149 Fumarate lyase superfamily signature 321 337 1.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family MC28_5335 1746463cc750230cf7a009351077865c 480 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 1.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family MC28_5335 1746463cc750230cf7a009351077865c 480 PRINTS PR00149 Fumarate lyase superfamily signature 275 302 1.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family MC28_5335 1746463cc750230cf7a009351077865c 480 Gene3D G3DSA:1.10.275.10 10 143 1.7E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal MC28_5335 1746463cc750230cf7a009351077865c 480 Gene3D G3DSA:1.20.200.10 144 411 3.8E-113 T 14-10-2018 MC28_5335 1746463cc750230cf7a009351077865c 480 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 10 470 3.1E-238 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 MC28_5335 1746463cc750230cf7a009351077865c 480 Pfam PF10415 Fumarase C C-terminus 412 465 7.8E-23 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_5335 1746463cc750230cf7a009351077865c 480 Pfam PF00206 Lyase 17 346 2.2E-110 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal MC28_3130 e59063b56e06e457468f9f3317f629a0 256 Pfam PF03799 Cell division protein FtsQ 126 240 3.2E-7 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB MC28_3130 e59063b56e06e457468f9f3317f629a0 256 Hamap MF_00912 Cell division protein DivIB [divIB]. 9 254 31.761 T 14-10-2018 IPR026580 Cell division protein DivIB MC28_3130 e59063b56e06e457468f9f3317f629a0 256 Pfam PF08478 POTRA domain, FtsQ-type 53 121 1.1E-19 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type MC28_3130 e59063b56e06e457468f9f3317f629a0 256 Gene3D G3DSA:3.10.20.310 53 119 4.5E-6 T 14-10-2018 MC28_3130 e59063b56e06e457468f9f3317f629a0 256 Gene3D G3DSA:3.40.50.10960 120 235 1.6E-35 T 14-10-2018 MC28_2789 e00c7410eb0a409286d70428ada85601 315 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 269 5.6E-35 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_2789 e00c7410eb0a409286d70428ada85601 315 SUPERFAMILY SSF54593 7 281 1.68E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2789 e00c7410eb0a409286d70428ada85601 315 Gene3D G3DSA:3.10.180.10 70 213 1.0E-123 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2789 e00c7410eb0a409286d70428ada85601 315 Gene3D G3DSA:3.10.180.10 10 306 1.0E-123 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0948 6629853291300e1414aa7ab7886f296b 188 Gene3D G3DSA:1.10.1740.10 5 90 1.7E-14 T 14-10-2018 MC28_0948 6629853291300e1414aa7ab7886f296b 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 177 1.5E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_0948 6629853291300e1414aa7ab7886f296b 188 Pfam PF08281 Sigma-70, region 4 121 174 9.5E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_0948 6629853291300e1414aa7ab7886f296b 188 SUPERFAMILY SSF88659 106 177 3.92E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_0948 6629853291300e1414aa7ab7886f296b 188 Gene3D G3DSA:1.10.10.10 101 180 1.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0948 6629853291300e1414aa7ab7886f296b 188 Pfam PF04542 Sigma-70 region 2 24 93 3.0E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0948 6629853291300e1414aa7ab7886f296b 188 SUPERFAMILY SSF88946 4 109 4.19E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0139 b3d843e6309565df4cc13ee5a6263d11 117 Hamap MF_01526 UPF0342 protein . 2 113 19.018 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA MC28_0139 b3d843e6309565df4cc13ee5a6263d11 117 SUPERFAMILY SSF158622 4 113 8.24E-35 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily MC28_0139 b3d843e6309565df4cc13ee5a6263d11 117 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 5 108 3.0E-23 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA MC28_0139 b3d843e6309565df4cc13ee5a6263d11 117 Gene3D G3DSA:1.20.1500.10 2 113 1.3E-35 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 SUPERFAMILY SSF49785 1051 1163 9.5E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 Pfam PF03945 delta endotoxin, N-terminal domain 102 295 1.2E-26 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 Gene3D G3DSA:2.60.120.260 299 666 1.8E-63 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 Gene3D G3DSA:2.60.120.260 1048 1187 1.0E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 Gene3D G3DSA:1.20.190.10 72 297 6.2E-69 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 SUPERFAMILY SSF49785 518 668 4.25E-26 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 Pfam PF00555 delta endotoxin 305 516 6.0E-20 T 14-10-2018 IPR001178 Pesticidal crystal protein, central domain GO:0005102|GO:0009405 MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 SUPERFAMILY SSF51096 299 517 9.94E-24 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 Gene3D G3DSA:2.100.10.10 309 515 1.8E-63 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 Pfam PF03944 delta endotoxin 527 667 1.3E-22 T 14-10-2018 IPR005638 Pesticidal crystal protein, C-terminal GO:0090729 MC28_D165 6aa5c8a2021a3bfb64365205cacb9205 1264 SUPERFAMILY SSF56849 45 295 2.75E-68 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 52 66 9.2E-7 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 82 98 9.2E-7 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 11 25 9.2E-7 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 SUPERFAMILY SSF52317 6 230 1.6E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 Gene3D G3DSA:3.40.50.880 7 202 1.2E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 515 1.2E-157 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 SUPERFAMILY SSF52402 190 408 5.95E-63 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 Pfam PF02540 NAD synthase 212 285 5.2E-6 T 14-10-2018 IPR022310 NAD/GMP synthase MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 Gene3D G3DSA:3.40.50.620 203 395 4.4E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 8 515 55.664 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 PRINTS PR00097 Anthranilate synthase component II signature 55 64 1.2E-5 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 PRINTS PR00097 Anthranilate synthase component II signature 170 183 1.2E-5 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 PRINTS PR00097 Anthranilate synthase component II signature 82 93 1.2E-5 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 Pfam PF00958 GMP synthase C terminal domain 423 514 1.8E-44 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 55 64 6.8E-8 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 6.8E-8 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 170 183 6.8E-8 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 11 197 7.6E-85 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 Gene3D G3DSA:3.30.300.10 396 515 1.7E-51 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 SUPERFAMILY SSF54810 395 515 4.05E-51 T 14-10-2018 MC28_4957 780d1302737d947b4cddf8a605fc71a9 515 Pfam PF00117 Glutamine amidotransferase class-I 13 192 5.6E-46 T 14-10-2018 IPR017926 Glutamine amidotransferase MC28_F187 c9346bc23296a359165c268ebdf768a7 1038 Pfam PF00583 Acetyltransferase (GNAT) family 48 139 1.5E-4 T 14-10-2018 IPR000182 GNAT domain MC28_F187 c9346bc23296a359165c268ebdf768a7 1038 Gene3D G3DSA:3.40.630.30 7 159 1.3E-13 T 14-10-2018 MC28_F187 c9346bc23296a359165c268ebdf768a7 1038 SUPERFAMILY SSF55729 5 152 4.15E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Gene3D G3DSA:3.10.20.740 5 127 8.6E-28 T 14-10-2018 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Pfam PF00384 Molybdopterin oxidoreductase 318 741 5.3E-80 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 262 315 7.4E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Pfam PF01568 Molydopterin dinucleotide binding domain 824 931 4.3E-21 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 SUPERFAMILY SSF54862 136 218 1.7E-16 T 14-10-2018 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 266 934 4.6E-249 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 87 124 2.1E-9 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Gene3D G3DSA:2.40.40.20 817 943 5.8E-29 T 14-10-2018 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Gene3D G3DSA:3.30.70.20 130 212 1.2E-19 T 14-10-2018 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 266 283 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Gene3D G3DSA:2.20.25.90 261 316 7.2E-19 T 14-10-2018 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 SMART SM00929 85 126 9.5E-12 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 SUPERFAMILY SSF53706 255 775 1.83E-191 T 14-10-2018 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 SMART SM00926 261 315 8.2E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 SUPERFAMILY SSF50692 797 936 4.29E-35 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Pfam PF00037 4Fe-4S binding domain 188 209 9.7E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Pfam PF00037 4Fe-4S binding domain 145 162 4.8E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Gene3D G3DSA:3.40.50.740 323 782 4.5E-160 T 14-10-2018 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 78 3.7E-12 T 14-10-2018 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 SUPERFAMILY SSF54292 6 128 4.5E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 Gene3D G3DSA:3.40.228.10 396 595 4.5E-160 T 14-10-2018 MC28_5313 7479e8ecc7d6d762f7d45bd8386ff720 978 PIRSF PIRSF036643 1 968 0.0 T 14-10-2018 MC28_1954 ad4293aa0970734e87e858ad0613d573 203 SUPERFAMILY SSF48498 91 202 2.29E-26 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_1954 ad4293aa0970734e87e858ad0613d573 203 Gene3D G3DSA:1.10.357.10 63 203 4.7E-29 T 14-10-2018 MC28_1954 ad4293aa0970734e87e858ad0613d573 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 64 5.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1954 ad4293aa0970734e87e858ad0613d573 203 Gene3D G3DSA:1.10.10.60 3 62 7.4E-13 T 14-10-2018 MC28_1954 ad4293aa0970734e87e858ad0613d573 203 SUPERFAMILY SSF46689 8 77 9.23E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_5294 9f5eda2d932097724de67771e6823969 228 Gene3D G3DSA:1.10.10.10 131 228 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5294 9f5eda2d932097724de67771e6823969 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.5E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_5294 9f5eda2d932097724de67771e6823969 228 Pfam PF00072 Response regulator receiver domain 9 117 6.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5294 9f5eda2d932097724de67771e6823969 228 SMART SM00448 6 116 1.4E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5294 9f5eda2d932097724de67771e6823969 228 Gene3D G3DSA:3.40.50.2300 2 130 1.8E-37 T 14-10-2018 MC28_5294 9f5eda2d932097724de67771e6823969 228 SUPERFAMILY SSF52172 4 129 5.69E-41 T 14-10-2018 IPR011006 CheY-like superfamily MC28_5294 9f5eda2d932097724de67771e6823969 228 SUPERFAMILY SSF46894 128 226 4.25E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_5294 9f5eda2d932097724de67771e6823969 228 SMART SM00862 150 225 4.7E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_5421 98bb0d2cd3b636206bd4fae954389a6c 66 Gene3D G3DSA:1.10.260.40 1 65 1.6E-25 T 14-10-2018 MC28_5421 98bb0d2cd3b636206bd4fae954389a6c 66 SMART SM00530 5 60 1.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5421 98bb0d2cd3b636206bd4fae954389a6c 66 Pfam PF01381 Helix-turn-helix 6 56 2.2E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5421 98bb0d2cd3b636206bd4fae954389a6c 66 SUPERFAMILY SSF47413 5 64 3.49E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3260 f17ce66b77475560f7be9ef5bfeedcf0 325 SUPERFAMILY SSF52518 3 192 2.12E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_3260 f17ce66b77475560f7be9ef5bfeedcf0 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 9.7E-40 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_3260 f17ce66b77475560f7be9ef5bfeedcf0 325 Pfam PF02780 Transketolase, C-terminal domain 194 315 5.0E-40 T 14-10-2018 IPR033248 Transketolase, C-terminal domain MC28_3260 f17ce66b77475560f7be9ef5bfeedcf0 325 SMART SM00861 4 179 3.6E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_3260 f17ce66b77475560f7be9ef5bfeedcf0 325 Gene3D G3DSA:3.40.50.970 1 192 1.6E-80 T 14-10-2018 MC28_3260 f17ce66b77475560f7be9ef5bfeedcf0 325 Gene3D G3DSA:3.40.50.920 193 325 5.3E-49 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_3260 f17ce66b77475560f7be9ef5bfeedcf0 325 SUPERFAMILY SSF52922 188 325 4.32E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_5106 a6d2065d345b97899f3a13c204afb4d0 255 SUPERFAMILY SSF161098 51 235 2.09E-29 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5106 a6d2065d345b97899f3a13c204afb4d0 255 Gene3D G3DSA:1.10.3720.10 47 245 1.8E-23 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5106 a6d2065d345b97899f3a13c204afb4d0 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 247 2.3E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 ProSitePatterns PS00756 Protein secY signature 2. 157 174 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PIRSF PIRSF004557 1 425 6.2E-130 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 Gene3D G3DSA:1.10.3370.10 1 419 6.3E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 419 1.6E-147 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 392 410 1.1E-101 T 14-10-2018 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 358 376 1.1E-101 T 14-10-2018 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 59 79 1.1E-101 T 14-10-2018 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 10 28 1.1E-101 T 14-10-2018 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 303 325 1.1E-101 T 14-10-2018 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 1.1E-101 T 14-10-2018 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 138 163 1.1E-101 T 14-10-2018 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 164 187 1.1E-101 T 14-10-2018 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 PRINTS PR00303 Preprotein translocase SecY subunit signature 263 282 1.1E-101 T 14-10-2018 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 SUPERFAMILY SSF103491 2 414 4.05E-128 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 Pfam PF00344 SecY translocase 60 407 2.5E-114 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 423 29.313 T 14-10-2018 IPR026593 Protein translocase subunit SecY MC28_4842 3ed66c03641f83b7d30dbcc5baae9d63 425 ProSitePatterns PS00755 Protein secY signature 1. 60 79 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_4082 efc25016deb61c26218a97655b8d54b9 449 PIRSF PIRSF006446 1 449 3.8E-173 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 MC28_4082 efc25016deb61c26218a97655b8d54b9 449 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 433 9.1E-175 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 MC28_4769 089b0b786a43d81e4a377ee64c2e393e 178 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 177 9.7E-45 T 14-10-2018 IPR039472 Sporulation stage V protein T, GAF domain MC28_4769 089b0b786a43d81e4a377ee64c2e393e 178 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.1E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_4769 089b0b786a43d81e4a377ee64c2e393e 178 PIRSF PIRSF026579 1 178 3.6E-95 T 14-10-2018 IPR014213 Sporulation stage V, protein T MC28_4769 089b0b786a43d81e4a377ee64c2e393e 178 SMART SM00966 8 52 1.1E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_4769 089b0b786a43d81e4a377ee64c2e393e 178 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.2E-15 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_4769 089b0b786a43d81e4a377ee64c2e393e 178 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 177 8.4E-93 T 14-10-2018 IPR014213 Sporulation stage V, protein T MC28_4769 089b0b786a43d81e4a377ee64c2e393e 178 SUPERFAMILY SSF89447 1 52 9.03E-15 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily MC28_4769 089b0b786a43d81e4a377ee64c2e393e 178 Gene3D G3DSA:2.10.260.10 1 49 3.8E-24 T 14-10-2018 MC28_4769 089b0b786a43d81e4a377ee64c2e393e 178 Gene3D G3DSA:3.30.450.40 56 178 1.1E-44 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_4522 dbfa074c4f695441475120d3af5995d0 335 SUPERFAMILY SSF52540 39 199 1.52E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4522 dbfa074c4f695441475120d3af5995d0 335 Gene3D G3DSA:3.40.50.300 6 228 8.3E-26 T 14-10-2018 MC28_4522 dbfa074c4f695441475120d3af5995d0 335 Gene3D G3DSA:2.40.50.40 229 295 1.5E-13 T 14-10-2018 MC28_4522 dbfa074c4f695441475120d3af5995d0 335 Pfam PF04397 LytTr DNA-binding domain 235 333 9.1E-25 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 MC28_4522 dbfa074c4f695441475120d3af5995d0 335 SMART SM00850 235 334 3.6E-31 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 MC28_4522 dbfa074c4f695441475120d3af5995d0 335 Pfam PF00005 ABC transporter 18 148 6.6E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4522 dbfa074c4f695441475120d3af5995d0 335 PIRSF PIRSF036612 1 335 6.5E-152 T 14-10-2018 IPR012046 LytTR transcriptional regulator with ABC transporter ATP-binding domain MC28_E055 54f488dda40983b9ecb0fbaef32c441d 409 Pfam PF00534 Glycosyl transferases group 1 123 280 4.0E-37 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_E055 54f488dda40983b9ecb0fbaef32c441d 409 Pfam PF13439 Glycosyltransferase Family 4 9 117 1.7E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 MC28_E055 54f488dda40983b9ecb0fbaef32c441d 409 Gene3D G3DSA:3.40.50.2000 114 296 1.4E-58 T 14-10-2018 MC28_E055 54f488dda40983b9ecb0fbaef32c441d 409 Gene3D G3DSA:3.40.50.2000 18 300 1.4E-58 T 14-10-2018 MC28_E055 54f488dda40983b9ecb0fbaef32c441d 409 SUPERFAMILY SSF53756 10 314 1.41E-67 T 14-10-2018 MC28_3111 f376449725c95200884177cc6e86ed7b 428 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 45.72 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3111 f376449725c95200884177cc6e86ed7b 428 Gene3D G3DSA:2.30.40.10 7 419 7.3E-173 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_3111 f376449725c95200884177cc6e86ed7b 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 17 422 3.7E-153 T 14-10-2018 MC28_3111 f376449725c95200884177cc6e86ed7b 428 Gene3D G3DSA:3.20.20.140 54 366 7.3E-173 T 14-10-2018 MC28_3111 f376449725c95200884177cc6e86ed7b 428 SUPERFAMILY SSF51338 1 424 2.54E-31 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_3111 f376449725c95200884177cc6e86ed7b 428 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_3111 f376449725c95200884177cc6e86ed7b 428 Pfam PF01979 Amidohydrolase family 51 419 2.0E-52 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 MC28_3111 f376449725c95200884177cc6e86ed7b 428 SUPERFAMILY SSF51556 54 367 6.82E-114 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_3111 f376449725c95200884177cc6e86ed7b 428 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 MC28_4776 a87ddd8a52b018867b2296b31cab7415 815 SMART SM00331 585 797 1.5E-51 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_4776 a87ddd8a52b018867b2296b31cab7415 815 SMART SM00332 594 795 3.4E-4 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_4776 a87ddd8a52b018867b2296b31cab7415 815 SUPERFAMILY SSF81606 586 798 3.4E-21 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_4776 a87ddd8a52b018867b2296b31cab7415 815 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 612 797 3.4E-36 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_4776 a87ddd8a52b018867b2296b31cab7415 815 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 35 797 1.6E-254 T 14-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_4776 a87ddd8a52b018867b2296b31cab7415 815 Gene3D G3DSA:3.60.40.10 579 815 1.1E-51 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_0076 32ef0ec56240581440194187e8b83941 244 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 11 233 2.9E-82 T 14-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 MC28_0076 32ef0ec56240581440194187e8b83941 244 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 16 227 6.4E-54 T 14-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 MC28_1917 db6ca54bcb2cd512cf138ad820ce4ffb 230 Gene3D G3DSA:1.10.150.240 16 96 1.9E-51 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_1917 db6ca54bcb2cd512cf138ad820ce4ffb 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 98 194 1.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_1917 db6ca54bcb2cd512cf138ad820ce4ffb 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 5.1E-30 T 14-10-2018 MC28_1917 db6ca54bcb2cd512cf138ad820ce4ffb 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 110 189 5.2E-16 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_1917 db6ca54bcb2cd512cf138ad820ce4ffb 230 SUPERFAMILY SSF56784 3 222 1.18E-40 T 14-10-2018 IPR036412 HAD-like superfamily MC28_1917 db6ca54bcb2cd512cf138ad820ce4ffb 230 Gene3D G3DSA:3.40.50.1000 5 218 1.9E-51 T 14-10-2018 IPR023214 HAD superfamily MC28_0509 d841f2f89e67e0344e06502eaa73559f 197 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 11 44 1.3E-12 T 14-10-2018 IPR023833 Signal peptide, camelysin MC28_0509 d841f2f89e67e0344e06502eaa73559f 197 Pfam PF12389 Camelysin metallo-endopeptidase 2 196 5.2E-93 T 14-10-2018 IPR022121 Peptidase M73, camelysin MC28_E120 331181adfca437904f3fcf189888e445 394 SUPERFAMILY SSF53383 1 386 1.02E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_E120 331181adfca437904f3fcf189888e445 394 Gene3D G3DSA:3.40.640.10 68 291 1.6E-152 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_E120 331181adfca437904f3fcf189888e445 394 Gene3D G3DSA:3.90.1150.10 14 383 1.6E-152 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_E120 331181adfca437904f3fcf189888e445 394 Pfam PF00155 Aminotransferase class I and II 43 383 2.5E-38 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_E120 331181adfca437904f3fcf189888e445 394 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 387 1.1E-152 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 332 345 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 597 616 1.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 580 597 1.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 Pfam PF02954 Bacterial regulatory protein, Fis family 574 614 1.1E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 SUPERFAMILY SSF52540 308 545 3.84E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 Gene3D G3DSA:1.10.10.60 556 616 1.2E-10 T 14-10-2018 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 395 410 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 SMART SM00382 328 472 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 Pfam PF01590 GAF domain 106 201 2.7E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 Pfam PF00158 Sigma-54 interaction domain 309 475 9.8E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 Gene3D G3DSA:1.10.8.60 480 552 2.1E-15 T 14-10-2018 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 SUPERFAMILY SSF46689 572 616 2.51E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 Gene3D G3DSA:3.40.50.300 301 479 1.8E-61 T 14-10-2018 MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 Gene3D G3DSA:3.30.450.40 18 203 3.0E-61 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_1956 b41c7f80e65ffb93a030d3d271313edf 616 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 517 526 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site MC28_1964 96a48feffa82d90bbed25623122cc705 459 PIRSF PIRSF000350 1 454 1.6E-85 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 MC28_1964 96a48feffa82d90bbed25623122cc705 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 5.8E-32 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 MC28_1964 96a48feffa82d90bbed25623122cc705 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 MC28_1964 96a48feffa82d90bbed25623122cc705 459 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 459 1.8E-169 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.2E-37 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 3.2E-37 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 3.2E-37 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 3.2E-37 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 3.2E-37 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 SUPERFAMILY SSF55424 336 458 5.5E-37 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_1964 96a48feffa82d90bbed25623122cc705 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 321 6.7E-66 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_1964 96a48feffa82d90bbed25623122cc705 459 Gene3D G3DSA:3.50.50.60 149 268 1.7E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1964 96a48feffa82d90bbed25623122cc705 459 Gene3D G3DSA:3.30.390.30 339 459 2.9E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 2.1E-66 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 2.1E-66 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 2.1E-66 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 2.1E-66 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 2.1E-66 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 2.1E-66 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.1E-66 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 2.1E-66 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 2.1E-66 T 14-10-2018 MC28_1964 96a48feffa82d90bbed25623122cc705 459 SUPERFAMILY SSF51905 4 366 2.59E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1964 96a48feffa82d90bbed25623122cc705 459 Gene3D G3DSA:3.50.50.60 4 325 1.7E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1953 207ffd1a5856c54d4421e7bc9bafe77e 428 Hamap MF_01970 Kynureninase [kynU]. 3 412 40.062 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 MC28_1953 207ffd1a5856c54d4421e7bc9bafe77e 428 TIGRFAM TIGR01814 kynureninase: kynureninase 14 413 1.3E-123 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 MC28_1953 207ffd1a5856c54d4421e7bc9bafe77e 428 PIRSF PIRSF038800 6 420 3.3E-153 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 MC28_1953 207ffd1a5856c54d4421e7bc9bafe77e 428 Gene3D G3DSA:3.90.1150.10 17 412 5.8E-143 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_1953 207ffd1a5856c54d4421e7bc9bafe77e 428 Pfam PF00266 Aminotransferase class-V 85 373 8.7E-21 T 14-10-2018 IPR000192 Aminotransferase class V domain MC28_1953 207ffd1a5856c54d4421e7bc9bafe77e 428 SUPERFAMILY SSF53383 10 414 6.13E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_1953 207ffd1a5856c54d4421e7bc9bafe77e 428 Gene3D G3DSA:3.40.640.10 47 316 5.8E-143 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3962 9a06520f4a948137cbf21300ce026331 113 Pfam PF06713 Bacterial PH domain 41 102 5.5E-9 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 MC28_0182 877687862a2bd05581280e609f4ed7f3 966 Pfam PF11907 Domain of unknown function (DUF3427) 687 960 6.1E-83 T 14-10-2018 IPR021835 Protein of unknown function DUF3427 MC28_0182 877687862a2bd05581280e609f4ed7f3 966 Gene3D G3DSA:3.40.50.300 413 607 1.9E-40 T 14-10-2018 MC28_0182 877687862a2bd05581280e609f4ed7f3 966 Pfam PF13091 PLD-like domain 57 177 4.0E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_0182 877687862a2bd05581280e609f4ed7f3 966 SMART SM00487 222 402 7.0E-9 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_0182 877687862a2bd05581280e609f4ed7f3 966 SUPERFAMILY SSF52540 271 569 2.7E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0182 877687862a2bd05581280e609f4ed7f3 966 Pfam PF04851 Type III restriction enzyme, res subunit 224 375 1.4E-33 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 MC28_0182 877687862a2bd05581280e609f4ed7f3 966 SUPERFAMILY SSF56024 39 181 7.85E-17 T 14-10-2018 MC28_0182 877687862a2bd05581280e609f4ed7f3 966 Pfam PF00271 Helicase conserved C-terminal domain 452 546 1.2E-14 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_0182 877687862a2bd05581280e609f4ed7f3 966 SMART SM00490 467 548 5.8E-15 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_0182 877687862a2bd05581280e609f4ed7f3 966 Gene3D G3DSA:3.40.50.300 210 390 8.1E-48 T 14-10-2018 MC28_0182 877687862a2bd05581280e609f4ed7f3 966 Gene3D G3DSA:3.30.870.10 26 202 2.6E-35 T 14-10-2018 MC28_1919 4d614ddcad723ab6737638a392db8765 483 SUPERFAMILY SSF47384 237 317 1.94E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_1919 4d614ddcad723ab6737638a392db8765 483 SUPERFAMILY SSF55874 307 473 3.67E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1919 4d614ddcad723ab6737638a392db8765 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 7.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1919 4d614ddcad723ab6737638a392db8765 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 7.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1919 4d614ddcad723ab6737638a392db8765 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 7.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1919 4d614ddcad723ab6737638a392db8765 483 SMART SM00387 362 475 1.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1919 4d614ddcad723ab6737638a392db8765 483 Gene3D G3DSA:1.10.287.130 244 318 3.7E-16 T 14-10-2018 MC28_1919 4d614ddcad723ab6737638a392db8765 483 SMART SM00304 177 229 1.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_1919 4d614ddcad723ab6737638a392db8765 483 Gene3D G3DSA:1.20.1480.50 143 236 1.3E-11 T 14-10-2018 MC28_1919 4d614ddcad723ab6737638a392db8765 483 Gene3D G3DSA:3.30.565.10 322 481 7.0E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1919 4d614ddcad723ab6737638a392db8765 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 473 2.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1919 4d614ddcad723ab6737638a392db8765 483 SUPERFAMILY SSF158472 177 226 1.01E-9 T 14-10-2018 MC28_1919 4d614ddcad723ab6737638a392db8765 483 SMART SM00388 251 317 3.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1919 4d614ddcad723ab6737638a392db8765 483 Pfam PF00672 HAMP domain 177 226 7.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_1919 4d614ddcad723ab6737638a392db8765 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 316 5.1E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5222 1a73f8a7803446f10fca5c32cc163c32 203 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 8 201 1.3E-45 T 14-10-2018 IPR014205 Sporulation protein YtaF MC28_5222 1a73f8a7803446f10fca5c32cc163c32 203 Pfam PF02659 Putative manganese efflux pump 40 200 5.8E-15 T 14-10-2018 IPR003810 Putative manganese efflux pump MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 Gene3D G3DSA:3.10.129.10 318 433 6.1E-9 T 14-10-2018 MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 SUPERFAMILY SSF54631 182 306 2.27E-29 T 14-10-2018 MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 Pfam PF07085 DRTGG domain 76 178 5.4E-30 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 Gene3D G3DSA:1.10.10.10 4 70 2.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 Pfam PF00571 CBS domain 254 307 2.3E-9 T 14-10-2018 IPR000644 CBS domain MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 Pfam PF00571 CBS domain 200 246 1.2E-5 T 14-10-2018 IPR000644 CBS domain MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 SUPERFAMILY SSF46785 5 54 1.7E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 SMART SM00116 200 248 2.4 T 14-10-2018 IPR000644 CBS domain MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 SMART SM00116 259 307 4.2E-8 T 14-10-2018 IPR000644 CBS domain MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 SUPERFAMILY SSF54637 335 436 1.2E-15 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 Gene3D G3DSA:3.10.580.10 186 314 3.1E-24 T 14-10-2018 MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 Pfam PF03061 Thioesterase superfamily 352 425 2.5E-9 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 SUPERFAMILY SSF75138 72 185 1.7E-29 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 Gene3D G3DSA:3.40.1390.20 71 178 3.8E-26 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily MC28_3888 72b84b454dfa832184c415a6b3b338bd 437 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 58 1.0E-4 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_4972 ec5016a60426996988855d162476661c 471 SUPERFAMILY SSF158472 189 234 1.96E-6 T 14-10-2018 MC28_4972 ec5016a60426996988855d162476661c 471 SUPERFAMILY SSF47384 227 311 5.3E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_4972 ec5016a60426996988855d162476661c 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 8.2E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4972 ec5016a60426996988855d162476661c 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 8.2E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4972 ec5016a60426996988855d162476661c 471 Gene3D G3DSA:1.20.1480.50 166 239 3.3E-8 T 14-10-2018 MC28_4972 ec5016a60426996988855d162476661c 471 SMART SM00304 184 236 4.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4972 ec5016a60426996988855d162476661c 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 2.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4972 ec5016a60426996988855d162476661c 471 SMART SM00388 244 311 2.8E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4972 ec5016a60426996988855d162476661c 471 SMART SM00387 357 470 2.8E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4972 ec5016a60426996988855d162476661c 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 457 8.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4972 ec5016a60426996988855d162476661c 471 Gene3D G3DSA:3.30.565.10 315 469 1.2E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4972 ec5016a60426996988855d162476661c 471 Gene3D G3DSA:1.10.287.130 240 311 1.9E-20 T 14-10-2018 MC28_4972 ec5016a60426996988855d162476661c 471 SUPERFAMILY SSF55874 300 468 7.12E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3740 5036a1f0232170ca7bde935db3fbeec4 265 SUPERFAMILY SSF52540 5 260 6.1E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3740 5036a1f0232170ca7bde935db3fbeec4 265 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 218 2.9E-26 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain MC28_3740 5036a1f0232170ca7bde935db3fbeec4 265 PIRSF PIRSF003092 1 265 5.7E-93 T 14-10-2018 IPR025501 ATP binding protein MinD MC28_3740 5036a1f0232170ca7bde935db3fbeec4 265 Gene3D G3DSA:3.40.50.300 3 254 1.6E-72 T 14-10-2018 MC28_3740 5036a1f0232170ca7bde935db3fbeec4 265 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 262 1.6E-122 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 MC28_4622 9141e132be4df2ca3136a506d3410510 423 SMART SM00936 299 400 1.9E-9 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_4622 9141e132be4df2ca3136a506d3410510 423 Gene3D G3DSA:3.40.710.10 21 299 1.5E-80 T 14-10-2018 MC28_4622 9141e132be4df2ca3136a506d3410510 423 Gene3D G3DSA:2.60.410.10 300 400 2.6E-15 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_4622 9141e132be4df2ca3136a506d3410510 423 SUPERFAMILY SSF56601 1 299 1.61E-73 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_4622 9141e132be4df2ca3136a506d3410510 423 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 279 3.2E-69 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MC28_4622 9141e132be4df2ca3136a506d3410510 423 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 299 400 2.4E-16 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_4622 9141e132be4df2ca3136a506d3410510 423 SUPERFAMILY SSF69189 291 380 3.34E-15 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_4622 9141e132be4df2ca3136a506d3410510 423 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 9.6E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_4622 9141e132be4df2ca3136a506d3410510 423 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 9.6E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_4622 9141e132be4df2ca3136a506d3410510 423 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 9.6E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_3492 2e85db383a725f7272f355cbd9f0adea 146 SUPERFAMILY SSF52304 3 144 1.44E-58 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 MC28_3492 2e85db383a725f7272f355cbd9f0adea 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 141 1.0E-75 T 14-10-2018 MC28_3492 2e85db383a725f7272f355cbd9f0adea 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 142 4.0E-65 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 MC28_3492 2e85db383a725f7272f355cbd9f0adea 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 66.28 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 MC28_3492 2e85db383a725f7272f355cbd9f0adea 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 MC28_3492 2e85db383a725f7272f355cbd9f0adea 146 Gene3D G3DSA:3.40.50.9100 1 146 5.2E-65 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 MC28_3492 2e85db383a725f7272f355cbd9f0adea 146 PIRSF PIRSF001399 1 146 1.7E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 MC28_3492 2e85db383a725f7272f355cbd9f0adea 146 Pfam PF01220 Dehydroquinase class II 3 139 1.3E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 MC28_3449 f7f9a307ccee5eaa99a5b034cba0d2f8 234 Pfam PF04239 Protein of unknown function (DUF421) 98 211 1.1E-26 T 14-10-2018 IPR007353 Protein of unknown function DUF421 MC28_3449 f7f9a307ccee5eaa99a5b034cba0d2f8 234 Gene3D G3DSA:3.30.240.20 179 234 1.8E-6 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_3449 f7f9a307ccee5eaa99a5b034cba0d2f8 234 Gene3D G3DSA:3.30.240.20 90 164 6.5E-19 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_4878 f806c6087eb1b0781aac0dd41afdd3b1 270 PIRSF PIRSF002854 1 270 2.3E-91 T 14-10-2018 IPR004872 Lipoprotein NlpA family MC28_4878 f806c6087eb1b0781aac0dd41afdd3b1 270 Gene3D G3DSA:3.40.190.10 116 220 3.9E-88 T 14-10-2018 MC28_4878 f806c6087eb1b0781aac0dd41afdd3b1 270 Gene3D G3DSA:3.40.190.10 35 266 3.9E-88 T 14-10-2018 MC28_4878 f806c6087eb1b0781aac0dd41afdd3b1 270 Pfam PF03180 NLPA lipoprotein 35 270 2.3E-87 T 14-10-2018 IPR004872 Lipoprotein NlpA family MC28_4878 f806c6087eb1b0781aac0dd41afdd3b1 270 SUPERFAMILY SSF53850 34 270 3.44E-78 T 14-10-2018 MC28_4766 8de99dcd56f9bd277754b725b4de9432 207 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 22 207 8.6E-73 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 MC28_4766 8de99dcd56f9bd277754b725b4de9432 207 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 128 138 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 MC28_4766 8de99dcd56f9bd277754b725b4de9432 207 Pfam PF01195 Peptidyl-tRNA hydrolase 24 206 2.2E-61 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 MC28_4766 8de99dcd56f9bd277754b725b4de9432 207 SUPERFAMILY SSF53178 21 206 3.92E-73 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 MC28_4766 8de99dcd56f9bd277754b725b4de9432 207 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 22 199 38.599 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 MC28_4766 8de99dcd56f9bd277754b725b4de9432 207 Gene3D G3DSA:3.40.50.1470 10 207 9.1E-74 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 MC28_4766 8de99dcd56f9bd277754b725b4de9432 207 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 35 48 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 Gene3D G3DSA:1.10.286.20 196 242 5.2E-42 T 14-10-2018 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 Gene3D G3DSA:1.10.8.10 4 58 9.8E-29 T 14-10-2018 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 Gene3D G3DSA:3.30.479.20 59 149 4.8E-24 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 SUPERFAMILY SSF46934 4 58 1.18E-21 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 Gene3D G3DSA:3.30.479.20 158 276 5.2E-42 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 ProSitePatterns PS01126 Elongation factor Ts signature 1. 14 29 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 4 295 3.1E-118 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 SUPERFAMILY SSF54713 58 147 6.41E-22 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 SUPERFAMILY SSF54713 154 296 2.62E-52 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 Pfam PF00889 Elongation factor TS 73 277 4.0E-75 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 MC28_3049 386e2fd6a7d652eed166a0d42b42e21d 298 Hamap MF_00050 Elongation factor Ts [tsf]. 1 294 82.077 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 Gene3D G3DSA:1.10.287.130 131 205 1.2E-20 T 14-10-2018 MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 251 346 1.8E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 201 1.5E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 338 2.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 314 2.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 Gene3D G3DSA:3.30.565.10 206 358 6.0E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 SMART SM00388 136 203 1.3E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 SMART SM00387 249 357 1.5E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 SUPERFAMILY SSF55874 207 356 3.01E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 SUPERFAMILY SSF158472 83 127 1.57E-6 T 14-10-2018 MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 SUPERFAMILY SSF47384 119 200 1.06E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 SMART SM00304 76 128 0.0065 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_2434 3bc554c62b542a3b83447432e43bfc81 358 Gene3D G3DSA:1.20.1480.50 49 130 4.3E-6 T 14-10-2018 MC28_1876 feb1930d90cdb88626e9de3a8040c108 152 Gene3D G3DSA:3.40.630.30 48 150 1.5E-20 T 14-10-2018 MC28_1876 feb1930d90cdb88626e9de3a8040c108 152 Pfam PF00583 Acetyltransferase (GNAT) family 49 135 5.6E-10 T 14-10-2018 IPR000182 GNAT domain MC28_1876 feb1930d90cdb88626e9de3a8040c108 152 SUPERFAMILY SSF55729 3 148 4.85E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 SUPERFAMILY SSF50447 360 442 5.82E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 686 17.547 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 104 686 2.2E-279 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Gene3D G3DSA:2.40.30.10 360 476 3.4E-40 T 14-10-2018 MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Gene3D G3DSA:1.10.10.2480 1 90 6.0E-12 T 14-10-2018 MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Gene3D G3DSA:2.40.30.10 590 686 8.2E-36 T 14-10-2018 MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 190 347 4.0E-38 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Gene3D G3DSA:3.40.50.10050 482 589 6.0E-39 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 SUPERFAMILY SSF52540 176 360 1.67E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Pfam PF11987 Translation-initiation factor 2 473 578 1.5E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 ProSitePatterns PS01176 Initiation factor 2 signature. 639 661 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 SUPERFAMILY SSF50447 589 686 2.08E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Pfam PF00009 Elongation factor Tu GTP binding domain 193 348 3.3E-37 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 SUPERFAMILY SSF52156 467 595 1.96E-39 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 113 161 5.9E-16 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 4.7E-15 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal MC28_3036 fff5bbc9ab815d29944717ba67849c16 686 Gene3D G3DSA:3.40.50.300 185 359 1.2E-75 T 14-10-2018 MC28_3032 e18d850046a6aade4438a2c3be2ebd28 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-39 T 14-10-2018 MC28_3032 e18d850046a6aade4438a2c3be2ebd28 89 Gene3D G3DSA:1.10.287.10 2 89 2.3E-37 T 14-10-2018 MC28_3032 e18d850046a6aade4438a2c3be2ebd28 89 SUPERFAMILY SSF47060 3 89 1.44E-36 T 14-10-2018 IPR009068 S15/NS1, RNA-binding MC28_3032 e18d850046a6aade4438a2c3be2ebd28 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.161 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3032 e18d850046a6aade4438a2c3be2ebd28 89 Pfam PF00312 Ribosomal protein S15 8 88 7.0E-38 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3032 e18d850046a6aade4438a2c3be2ebd28 89 SMART SM01387 8 88 2.1E-52 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3032 e18d850046a6aade4438a2c3be2ebd28 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 3.1E-42 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3032 e18d850046a6aade4438a2c3be2ebd28 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3941 fb1f604412d95093b1c363455148d774 186 Pfam PF12464 Maltose acetyltransferase 8 59 5.8E-15 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 MC28_3941 fb1f604412d95093b1c363455148d774 186 SUPERFAMILY SSF51161 2 185 1.66E-56 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_3941 fb1f604412d95093b1c363455148d774 186 Gene3D G3DSA:2.160.10.10 1 186 2.2E-73 T 14-10-2018 MC28_3941 fb1f604412d95093b1c363455148d774 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 MC28_3941 fb1f604412d95093b1c363455148d774 186 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 131 166 6.9E-12 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_3941 fb1f604412d95093b1c363455148d774 186 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 94 111 0.18 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_3941 fb1f604412d95093b1c363455148d774 186 SMART SM01266 6 60 5.2E-21 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 Gene3D G3DSA:3.40.630.20 1 215 8.4E-89 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 PIRSF PIRSF015592 1 213 6.7E-90 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 41.642 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 212 3.2E-86 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 SUPERFAMILY SSF53182 1 214 1.05E-73 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 1.4E-85 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 3.8E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 3.8E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 3.8E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 3.8E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 MC28_2263 f782380af7a5292a6b90a24f3ae8fe70 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 3.8E-48 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 Gene3D G3DSA:3.10.170.10 244 402 2.5E-37 T 14-10-2018 MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 245 398 5.9E-34 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 SUPERFAMILY SSF55486 244 562 1.72E-68 T 14-10-2018 MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 480 496 1.4E-18 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 411 422 1.4E-18 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 390 406 1.4E-18 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 361 381 1.4E-18 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 Pfam PF03413 Peptidase propeptide and YPEB domain 146 216 4.8E-6 T 14-10-2018 IPR025711 PepSY domain MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 Gene3D G3DSA:1.10.390.10 404 565 3.9E-46 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 402 563 1.6E-48 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 MC28_2522 35cfc9d91bd1a948f6e0f6c9075e6869 565 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 81 129 1.6E-13 T 14-10-2018 IPR011096 FTP domain MC28_4462 b7c769f4cc2cb9ca5e60e21e32d9c2d0 552 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 545 6.2E-225 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 MC28_4462 b7c769f4cc2cb9ca5e60e21e32d9c2d0 552 Pfam PF02652 L-lactate permease 17 542 3.1E-215 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 MC28_1358 b13b3f56262e969e4e62f437b945ad87 47 Pfam PF13128 Protein of unknown function (DUF3954) 4 39 3.1E-11 T 14-10-2018 IPR025017 Protein of unknown function DUF3954 MC28_E023 49522952e81b4f7305edb8b0b3a3ff9e 187 SUPERFAMILY SSF46955 8 130 9.16E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_E023 49522952e81b4f7305edb8b0b3a3ff9e 187 Pfam PF13411 MerR HTH family regulatory protein 9 75 2.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_E023 49522952e81b4f7305edb8b0b3a3ff9e 187 Gene3D G3DSA:1.10.1660.10 4 77 9.9E-10 T 14-10-2018 MC28_E023 49522952e81b4f7305edb8b0b3a3ff9e 187 Pfam PF13152 Protein of unknown function (DUF3967) 145 183 2.5E-8 T 14-10-2018 IPR025052 Domain of unknown function DUF3967 MC28_5024 7ac3ac8a613d314a6d17d6caae2c2026 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 MC28_5024 7ac3ac8a613d314a6d17d6caae2c2026 515 Gene3D G3DSA:3.40.309.10 289 479 4.5E-187 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_5024 7ac3ac8a613d314a6d17d6caae2c2026 515 SUPERFAMILY SSF53720 4 511 6.94E-155 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_5024 7ac3ac8a613d314a6d17d6caae2c2026 515 Pfam PF00171 Aldehyde dehydrogenase family 50 510 1.5E-154 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_5024 7ac3ac8a613d314a6d17d6caae2c2026 515 Gene3D G3DSA:3.40.605.10 39 502 4.5E-187 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_5024 7ac3ac8a613d314a6d17d6caae2c2026 515 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 515 74.061 T 14-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 MC28_5024 7ac3ac8a613d314a6d17d6caae2c2026 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 MC28_5024 7ac3ac8a613d314a6d17d6caae2c2026 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 514 9.8E-250 T 14-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 Gene3D G3DSA:3.30.470.20 189 324 1.0E-57 T 14-10-2018 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 414 3.4E-27 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 SUPERFAMILY SSF51246 324 416 1.18E-28 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 Gene3D G3DSA:3.90.600.10 325 423 3.9E-33 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 Gene3D G3DSA:3.40.50.20 2 93 5.6E-37 T 14-10-2018 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 5.7E-85 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 SMART SM01209 101 293 1.4E-134 T 14-10-2018 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 SMART SM01210 325 416 3.0E-44 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 5.4E-36 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 416 1.7E-171 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 SUPERFAMILY SSF56059 102 314 6.72E-64 T 14-10-2018 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 Gene3D G3DSA:3.30.1490.20 119 188 1.1E-28 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 SUPERFAMILY SSF52440 1 101 1.42E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_5014 4b5c79444396487dd71f63f0b7f63f82 423 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 416 42.815 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_1100 6f37720c86519bee134363b4d47075ac 375 Pfam PF01098 Cell cycle protein 10 366 7.3E-90 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_2310 a391ae683c84761a106da160000d1b34 121 Pfam PF06486 Protein of unknown function (DUF1093) 33 106 4.9E-10 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_2310 a391ae683c84761a106da160000d1b34 121 Gene3D G3DSA:2.40.50.480 27 117 2.7E-16 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_2310 a391ae683c84761a106da160000d1b34 121 SUPERFAMILY SSF159121 27 118 1.31E-19 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_2310 a391ae683c84761a106da160000d1b34 121 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 115 1.5E-9 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_4030 9344e3bde08a57cbfd3c3f7aa9169334 319 SMART SM00729 32 259 5.0E-42 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_4030 9344e3bde08a57cbfd3c3f7aa9169334 319 Pfam PF04055 Radical SAM superfamily 52 214 7.4E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_4030 9344e3bde08a57cbfd3c3f7aa9169334 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 15 312 4.8E-127 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 MC28_4030 9344e3bde08a57cbfd3c3f7aa9169334 319 Gene3D G3DSA:3.20.20.70 49 258 2.2E-12 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4030 9344e3bde08a57cbfd3c3f7aa9169334 319 Pfam PF16199 Radical_SAM C-terminal domain 220 302 4.2E-25 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 MC28_4030 9344e3bde08a57cbfd3c3f7aa9169334 319 SUPERFAMILY SSF102114 5 308 2.62E-52 T 14-10-2018 MC28_1452 b0b07223a82fe109736e0cd24ac9d254 503 SUPERFAMILY SSF53850 233 501 1.5E-74 T 14-10-2018 MC28_1452 b0b07223a82fe109736e0cd24ac9d254 503 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 233 498 2.4E-68 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 MC28_1452 b0b07223a82fe109736e0cd24ac9d254 503 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 201 2.0E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_1452 b0b07223a82fe109736e0cd24ac9d254 503 SUPERFAMILY SSF161098 15 198 1.31E-41 T 14-10-2018 IPR035906 MetI-like superfamily MC28_1452 b0b07223a82fe109736e0cd24ac9d254 503 Gene3D G3DSA:3.40.190.120 337 440 3.5E-97 T 14-10-2018 MC28_1452 b0b07223a82fe109736e0cd24ac9d254 503 Gene3D G3DSA:1.10.3720.10 13 206 2.7E-36 T 14-10-2018 IPR035906 MetI-like superfamily MC28_1452 b0b07223a82fe109736e0cd24ac9d254 503 Gene3D G3DSA:3.40.190.10 244 502 3.5E-97 T 14-10-2018 MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 Pfam PF02779 Transketolase, pyrimidine binding domain 354 525 9.3E-43 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 Gene3D G3DSA:3.40.50.970 332 539 3.5E-81 T 14-10-2018 MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 Gene3D G3DSA:3.40.50.970 4 331 1.0E-126 T 14-10-2018 MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 SUPERFAMILY SSF52518 4 326 1.42E-117 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 339 2.3E-157 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 SMART SM00861 355 526 8.2E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 SUPERFAMILY SSF52518 342 528 8.06E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 Gene3D G3DSA:3.40.50.920 540 666 6.8E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 SUPERFAMILY SSF52922 532 666 2.09E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 665 3.7E-300 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 MC28_2827 c06398d547a96f96f2c6d4f512111a6d 666 Pfam PF02780 Transketolase, C-terminal domain 549 658 2.2E-12 T 14-10-2018 IPR033248 Transketolase, C-terminal domain MC28_0738 87d4342657087aba18b0aa313f128ecc 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 146 1.7E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 339 1.1E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 SUPERFAMILY SSF52540 138 434 8.33E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0738 87d4342657087aba18b0aa313f128ecc 436 SUPERFAMILY SSF52540 5 167 9.82E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0738 87d4342657087aba18b0aa313f128ecc 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 9.6E-34 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like MC28_0738 87d4342657087aba18b0aa313f128ecc 436 Gene3D G3DSA:3.40.50.300 1 162 2.5E-46 T 14-10-2018 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 Pfam PF01926 50S ribosome-binding GTPase 178 295 5.6E-26 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.1E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 178 198 4.6E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 248 266 4.6E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 5.9E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 Gene3D G3DSA:3.30.300.20 353 436 3.4E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_0738 87d4342657087aba18b0aa313f128ecc 436 PIRSF PIRSF006485 2 436 4.9E-172 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 Hamap MF_00195 GTPase Der [der]. 3 436 40.927 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 MC28_0738 87d4342657087aba18b0aa313f128ecc 436 Gene3D G3DSA:3.40.50.300 170 352 5.5E-56 T 14-10-2018 MC28_2243 bcd1b3df55604ed91413b5fcaef5667d 223 SUPERFAMILY SSF52172 4 123 4.7E-29 T 14-10-2018 IPR011006 CheY-like superfamily MC28_2243 bcd1b3df55604ed91413b5fcaef5667d 223 SMART SM00448 4 112 2.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2243 bcd1b3df55604ed91413b5fcaef5667d 223 Gene3D G3DSA:3.40.50.2300 1 123 2.5E-28 T 14-10-2018 MC28_2243 bcd1b3df55604ed91413b5fcaef5667d 223 SUPERFAMILY SSF46894 125 217 1.93E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_2243 bcd1b3df55604ed91413b5fcaef5667d 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 2.0E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2243 bcd1b3df55604ed91413b5fcaef5667d 223 SMART SM00862 144 217 9.1E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2243 bcd1b3df55604ed91413b5fcaef5667d 223 Gene3D G3DSA:1.10.10.10 124 223 9.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2243 bcd1b3df55604ed91413b5fcaef5667d 223 Pfam PF00072 Response regulator receiver domain 6 112 3.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3731 9fdd6c39c8b98614557ce55181747e54 235 SUPERFAMILY SSF52172 1 123 1.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily MC28_3731 9fdd6c39c8b98614557ce55181747e54 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 9.8E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3731 9fdd6c39c8b98614557ce55181747e54 235 SMART SM00862 150 225 1.6E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3731 9fdd6c39c8b98614557ce55181747e54 235 Gene3D G3DSA:1.10.10.10 125 227 1.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3731 9fdd6c39c8b98614557ce55181747e54 235 SMART SM00448 2 112 5.0E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3731 9fdd6c39c8b98614557ce55181747e54 235 Pfam PF00072 Response regulator receiver domain 4 112 6.0E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3731 9fdd6c39c8b98614557ce55181747e54 235 SUPERFAMILY SSF46894 128 226 5.1E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_3731 9fdd6c39c8b98614557ce55181747e54 235 Gene3D G3DSA:3.40.50.2300 2 124 4.6E-28 T 14-10-2018 MC28_5166 b91742ebfe297690fae54074da1d03c6 239 SMART SM00382 88 221 0.0012 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5166 b91742ebfe297690fae54074da1d03c6 239 SUPERFAMILY SSF52540 53 218 3.02E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5166 b91742ebfe297690fae54074da1d03c6 239 Pfam PF01695 IstB-like ATP binding protein 57 208 5.8E-16 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 MC28_5166 b91742ebfe297690fae54074da1d03c6 239 Gene3D G3DSA:3.40.50.300 41 225 5.3E-41 T 14-10-2018 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 SUPERFAMILY SSF50249 130 229 3.94E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 SUPERFAMILY SSF50249 212 629 4.46E-149 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 ProSitePatterns PS01175 Ribonuclease II family signature. 549 573 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 Pfam PF00773 RNB domain 252 580 2.7E-113 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 63 712 4.0E-249 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 Pfam PF08206 Ribonuclease B OB domain 151 205 2.0E-7 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 Pfam PF08206 Ribonuclease B OB domain 76 136 4.3E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 Gene3D G3DSA:2.40.50.140 61 138 1.4E-17 T 14-10-2018 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 Gene3D G3DSA:2.40.50.140 139 207 5.7E-8 T 14-10-2018 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 TIGRFAM TIGR02063 RNase_R: ribonuclease R 11 712 3.5E-285 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 Pfam PF00575 S1 RNA binding domain 629 711 1.1E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 SMART SM00316 630 712 3.8E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 SMART SM00955 252 582 6.4E-179 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 Gene3D G3DSA:2.40.50.140 633 740 1.7E-25 T 14-10-2018 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 SUPERFAMILY SSF50249 630 710 2.11E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 SMART SM00357 75 137 2.9E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 SMART SM00357 139 206 0.0078 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 Hamap MF_01895 Ribonuclease R [rnr]. 27 712 60.692 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 MC28_4361 381e92954dcb906e8e4e426c2a439bf2 810 SUPERFAMILY SSF50249 57 139 6.68E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3535 c83c6c67dd2063dacc6a3a44acd07c70 348 Pfam PF00437 Type II/IV secretion system protein 13 276 3.0E-71 T 14-10-2018 IPR001482 Type II/IV secretion system protein MC28_3535 c83c6c67dd2063dacc6a3a44acd07c70 348 Gene3D G3DSA:3.30.450.90 2 109 7.3E-29 T 14-10-2018 MC28_3535 c83c6c67dd2063dacc6a3a44acd07c70 348 SUPERFAMILY SSF52540 6 286 5.07E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3535 c83c6c67dd2063dacc6a3a44acd07c70 348 SMART SM00382 137 266 9.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3535 c83c6c67dd2063dacc6a3a44acd07c70 348 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 205 219 - T 14-10-2018 IPR001482 Type II/IV secretion system protein MC28_3535 c83c6c67dd2063dacc6a3a44acd07c70 348 Gene3D G3DSA:3.40.50.300 111 338 2.9E-66 T 14-10-2018 MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 Gene3D G3DSA:3.30.70.920 58 143 7.6E-17 T 14-10-2018 MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 SUPERFAMILY SSF46785 6 67 2.28E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 55 8.3E-13 T 14-10-2018 MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 SUPERFAMILY SSF54909 70 141 1.11E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 Pfam PF01037 Lrp/AsnC ligand binding domain 82 128 4.2E-9 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 Gene3D G3DSA:1.10.10.10 5 57 4.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 SMART SM00344 8 114 2.4E-28 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 7.4E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 7.4E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_4350 d22164c6c255b3e86b8b85b06277e674 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 7.4E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Gene3D G3DSA:1.10.150.700 1092 1181 3.1E-36 T 14-10-2018 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Gene3D G3DSA:1.10.150.700 1203 1282 4.3E-14 T 14-10-2018 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Gene3D G3DSA:3.30.1900.20 969 1091 5.9E-58 T 14-10-2018 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Pfam PF00929 Exonuclease 419 573 5.7E-42 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Pfam PF14480 DNA polymerase III polC-type N-terminus I 10 80 2.3E-18 T 14-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Gene3D G3DSA:3.20.20.140 552 798 1.3E-58 T 14-10-2018 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Gene3D G3DSA:1.10.100.20 991 1038 5.9E-58 T 14-10-2018 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Gene3D G3DSA:3.30.420.10 407 551 1.0E-44 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 823 1232 4.1E-94 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 SMART SM00481 332 399 2.1E-26 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 SMART SM00479 417 583 5.0E-55 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Pfam PF02811 PHP domain 333 691 9.3E-52 T 14-10-2018 IPR004013 PHP domain GO:0003824 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Pfam PF11490 DNA polymerase III polC-type N-terminus II 96 205 2.1E-22 T 14-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Gene3D G3DSA:1.10.150.870 1284 1419 1.5E-51 T 14-10-2018 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 410 631 1.7E-64 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Pfam PF14579 Helix-hairpin-helix motif 1348 1424 2.0E-8 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 227 1433 0.0 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 SUPERFAMILY SSF50249 236 317 2.11E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1433 448.914 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 SUPERFAMILY SSF53098 417 873 2.28E-105 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 SUPERFAMILY SSF160975 1372 1412 6.28E-6 T 14-10-2018 MC28_3041 8c5c2953364c00a3de1b3aa7e9b469ba 1433 Gene3D G3DSA:2.40.50.140 216 317 1.3E-34 T 14-10-2018 MC28_4559 1e5989fea2fa14a6655dad1fc1400508 203 SMART SM00903 20 176 5.4E-27 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 MC28_4559 1e5989fea2fa14a6655dad1fc1400508 203 Gene3D G3DSA:2.30.110.10 1 203 8.3E-64 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 MC28_4559 1e5989fea2fa14a6655dad1fc1400508 203 SUPERFAMILY SSF50475 3 199 2.6E-44 T 14-10-2018 MC28_4559 1e5989fea2fa14a6655dad1fc1400508 203 Pfam PF01613 Flavin reductase like domain 23 175 1.9E-23 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 MC28_5390 7a38ca64486a85e54f3fe5e78073fa1a 494 SUPERFAMILY SSF52540 268 480 1.36E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5390 7a38ca64486a85e54f3fe5e78073fa1a 494 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_5390 7a38ca64486a85e54f3fe5e78073fa1a 494 Pfam PF00005 ABC transporter 269 422 9.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5390 7a38ca64486a85e54f3fe5e78073fa1a 494 Pfam PF00005 ABC transporter 18 169 3.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5390 7a38ca64486a85e54f3fe5e78073fa1a 494 SMART SM00382 27 223 4.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5390 7a38ca64486a85e54f3fe5e78073fa1a 494 SMART SM00382 277 471 1.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5390 7a38ca64486a85e54f3fe5e78073fa1a 494 Gene3D G3DSA:3.40.50.300 1 234 1.9E-57 T 14-10-2018 MC28_5390 7a38ca64486a85e54f3fe5e78073fa1a 494 Gene3D G3DSA:3.40.50.300 251 489 7.2E-46 T 14-10-2018 MC28_5390 7a38ca64486a85e54f3fe5e78073fa1a 494 SUPERFAMILY SSF52540 3 219 3.8E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3692 939422cc6232ada2da4d496b7e91cf45 255 SUPERFAMILY SSF69572 4 241 9.29E-63 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 MC28_3692 939422cc6232ada2da4d496b7e91cf45 255 Gene3D G3DSA:3.40.50.720 1 255 4.1E-82 T 14-10-2018 MC28_3692 939422cc6232ada2da4d496b7e91cf45 255 Pfam PF00899 ThiF family 6 158 1.5E-37 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 Gene3D G3DSA:3.40.50.720 2 246 3.5E-91 T 14-10-2018 MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 3.1E-73 T 14-10-2018 MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 244 2.6E-91 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 0.0048 T 14-10-2018 MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 SUPERFAMILY SSF51735 5 244 1.14E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2704 da46f3b8a67dfc922aff2de7c16ec73b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_G090 797e879b9f380e754cb3def4341d966c 492 Gene3D G3DSA:3.30.70.2450 185 259 2.7E-12 T 14-10-2018 MC28_G090 797e879b9f380e754cb3def4341d966c 492 Gene3D G3DSA:3.50.50.60 4 184 2.3E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_G090 797e879b9f380e754cb3def4341d966c 492 SUPERFAMILY SSF51905 5 366 1.53E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_G090 797e879b9f380e754cb3def4341d966c 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 324 340 1.4E-38 T 14-10-2018 MC28_G090 797e879b9f380e754cb3def4341d966c 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.4E-38 T 14-10-2018 MC28_G090 797e879b9f380e754cb3def4341d966c 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 1.4E-38 T 14-10-2018 MC28_G090 797e879b9f380e754cb3def4341d966c 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 324 1.4E-38 T 14-10-2018 MC28_G090 797e879b9f380e754cb3def4341d966c 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 149 164 1.4E-38 T 14-10-2018 MC28_G090 797e879b9f380e754cb3def4341d966c 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 1.4E-38 T 14-10-2018 MC28_G090 797e879b9f380e754cb3def4341d966c 492 Gene3D G3DSA:3.40.30.120 382 490 6.7E-10 T 14-10-2018 MC28_G090 797e879b9f380e754cb3def4341d966c 492 Gene3D G3DSA:3.50.50.60 260 378 4.2E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_G090 797e879b9f380e754cb3def4341d966c 492 Pfam PF01494 FAD binding domain 5 336 1.4E-78 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 SMART SM00155 405 432 8.1E-7 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 SMART SM00155 227 254 8.4E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 SUPERFAMILY SSF56024 119 322 4.32E-50 T 14-10-2018 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 Hamap MF_01916 Cardiolipin synthase. 23 492 43.9 T 14-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 SUPERFAMILY SSF56024 279 478 7.63E-51 T 14-10-2018 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 Gene3D G3DSA:3.30.870.10 122 310 4.4E-47 T 14-10-2018 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 Gene3D G3DSA:3.30.870.10 321 463 5.0E-30 T 14-10-2018 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 Pfam PF13396 Phospholipase_D-nuclease N-terminal 35 71 2.5E-8 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 21 492 2.2E-187 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 Pfam PF13091 PLD-like domain 145 287 3.0E-11 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_0415 3ef09fc6fcdaae7d27f045510889c249 492 Pfam PF13091 PLD-like domain 334 458 2.0E-28 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_2209 3ba7b2a9164744bf6c4035d0e6479ad1 584 SUPERFAMILY SSF51556 83 327 1.19E-9 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_2209 3ba7b2a9164744bf6c4035d0e6479ad1 584 Pfam PF13382 Adenine deaminase C-terminal domain 410 571 7.8E-35 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 MC28_2209 3ba7b2a9164744bf6c4035d0e6479ad1 584 SUPERFAMILY SSF51338 21 366 4.54E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_2209 3ba7b2a9164744bf6c4035d0e6479ad1 584 Gene3D G3DSA:3.20.20.140 82 325 9.9E-83 T 14-10-2018 MC28_2209 3ba7b2a9164744bf6c4035d0e6479ad1 584 Pfam PF01979 Amidohydrolase family 78 362 2.5E-19 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 MC28_2209 3ba7b2a9164744bf6c4035d0e6479ad1 584 Gene3D G3DSA:2.30.40.10 21 362 9.9E-83 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_4650 b51374ec69fe15cca88c32807b96002c 232 SUPERFAMILY SSF52172 9 163 1.39E-13 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4650 b51374ec69fe15cca88c32807b96002c 232 SMART SM00850 130 231 1.2E-29 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 MC28_4650 b51374ec69fe15cca88c32807b96002c 232 Pfam PF04397 LytTr DNA-binding domain 132 230 2.6E-27 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 MC28_4650 b51374ec69fe15cca88c32807b96002c 232 Gene3D G3DSA:2.40.50.1020 125 232 7.3E-14 T 14-10-2018 MC28_4650 b51374ec69fe15cca88c32807b96002c 232 Gene3D G3DSA:3.40.50.2300 1 122 7.3E-11 T 14-10-2018 MC28_4650 b51374ec69fe15cca88c32807b96002c 232 Pfam PF00072 Response regulator receiver domain 5 103 5.9E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 Gene3D G3DSA:1.10.8.500 169 217 1.1E-5 T 14-10-2018 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 SUPERFAMILY SSF47384 330 411 6.67E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 SMART SM00387 456 568 2.2E-46 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 Gene3D G3DSA:3.30.450.20 218 339 1.8E-17 T 14-10-2018 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 226 344 2.5E-10 T 14-10-2018 IPR000014 PAS domain MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 SUPERFAMILY SSF158472 172 219 1.57E-7 T 14-10-2018 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 Gene3D G3DSA:3.30.565.10 415 570 3.6E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 SMART SM00388 344 411 2.8E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 Gene3D G3DSA:1.10.287.130 340 414 1.1E-26 T 14-10-2018 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 Pfam PF00989 PAS fold 229 335 1.0E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 SUPERFAMILY SSF55874 400 566 2.88E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 SMART SM00304 169 221 3.8E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 4.1E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 565 4.1E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 507 4.1E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 521 4.1E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 Pfam PF00512 His Kinase A (phospho-acceptor) domain 344 410 2.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 SUPERFAMILY SSF55785 217 336 2.86E-11 T 14-10-2018 IPR035965 PAS domain superfamily MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 Pfam PF16736 Single Cache-like 17 133 4.4E-29 T 14-10-2018 IPR031967 PhoR, single Cache-like domain MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 566 7.6E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3866 d5c1cfcf21dfcf848fcc30e9428fbe02 571 SMART SM00091 228 295 4.2E-7 T 14-10-2018 IPR000014 PAS domain MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 SUPERFAMILY SSF54211 444 538 2.35E-13 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 Gene3D G3DSA:2.40.30.10 251 348 1.8E-15 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 SUPERFAMILY SSF54980 347 424 9.35E-13 T 14-10-2018 IPR035647 EF-G domain III/V-like MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 SUPERFAMILY SSF50447 226 339 1.3E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 Pfam PF00009 Elongation factor Tu GTP binding domain 3 241 1.4E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 Pfam PF03764 Elongation factor G, domain IV 444 538 6.2E-13 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 Gene3D G3DSA:3.30.70.240 544 614 6.7E-21 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 SUPERFAMILY SSF54980 541 622 3.45E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 Gene3D G3DSA:3.30.230.10 448 617 6.7E-21 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 Pfam PF00679 Elongation factor G C-terminus 541 619 8.0E-9 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 Pfam PF14492 Elongation Factor G, domain II 347 420 8.8E-9 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 153 5.4E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 SMART SM00889 423 538 8.3E-6 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.0E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.0E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.0E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.0E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.0E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 SUPERFAMILY SSF52540 4 242 1.18E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 Gene3D G3DSA:3.40.50.300 1 250 2.0E-78 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 510 527 2.3E-36 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 270 296 2.3E-36 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 2.3E-36 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 216 238 2.3E-36 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 461 475 2.3E-36 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 476 498 2.3E-36 T 14-10-2018 MC28_2226 bbb9f8bd6d10ab4aa6b2d52a3045d509 647 Gene3D G3DSA:3.30.70.870 349 425 9.6E-9 T 14-10-2018 MC28_4277 793cb85add4cd305893c3752abb55a07 305 Pfam PF01619 Proline dehydrogenase 45 298 5.5E-38 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 MC28_4277 793cb85add4cd305893c3752abb55a07 305 Gene3D G3DSA:3.20.20.530 19 305 1.8E-100 T 14-10-2018 MC28_4277 793cb85add4cd305893c3752abb55a07 305 PIRSF PIRSF000196 1 305 2.2E-137 T 14-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 MC28_4277 793cb85add4cd305893c3752abb55a07 305 SUPERFAMILY SSF51730 37 300 3.14E-79 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 Pfam PF00041 Fibronectin type III domain 305 380 1.9E-7 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 Gene3D G3DSA:2.70.50.50 30 199 5.4E-67 T 14-10-2018 MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 30 196 9.2E-39 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 Gene3D G3DSA:2.60.40.10 301 391 6.0E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 Gene3D G3DSA:2.60.40.10 207 293 2.4E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 SUPERFAMILY SSF49265 208 392 1.31E-27 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 SUPERFAMILY SSF81296 30 198 3.08E-57 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 SUPERFAMILY SSF51055 400 442 1.44E-6 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 SMART SM00060 303 380 2.8E-5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 SMART SM00060 209 282 2.4E-7 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_1985 569ed8541ac4421dbefc0dcacb98670a 444 Gene3D G3DSA:2.10.10.20 398 443 3.1E-8 T 14-10-2018 MC28_1861 f3c2d189e40b08ace05fce9a301451af 141 Gene3D G3DSA:3.10.450.50 2 136 7.6E-24 T 14-10-2018 MC28_1861 f3c2d189e40b08ace05fce9a301451af 141 Pfam PF07366 SnoaL-like polyketide cyclase 7 134 2.1E-28 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 MC28_1861 f3c2d189e40b08ace05fce9a301451af 141 SUPERFAMILY SSF54427 2 134 4.39E-28 T 14-10-2018 IPR032710 NTF2-like domain superfamily MC28_E118 dd22c954f517717f14891f682ee820d4 101 SUPERFAMILY SSF89447 9 59 4.06E-14 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily MC28_E118 dd22c954f517717f14891f682ee820d4 101 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 16 56 2.8E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_E118 dd22c954f517717f14891f682ee820d4 101 SMART SM00966 16 59 4.9E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_E118 dd22c954f517717f14891f682ee820d4 101 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 16 58 5.2E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_E118 dd22c954f517717f14891f682ee820d4 101 Gene3D G3DSA:2.10.260.10 9 62 2.2E-21 T 14-10-2018 MC28_2825 6f4210d3de872f899f152ca30fd5432f 73 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 41 2.0E-7 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 MC28_2825 6f4210d3de872f899f152ca30fd5432f 73 Pfam PF03672 Uncharacterised protein family (UPF0154) 11 69 4.4E-30 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 MC28_2825 6f4210d3de872f899f152ca30fd5432f 73 Hamap MF_00363 UPF0154 protein . 2 72 21.875 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 SMART SM00929 81 122 1.9E-12 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Gene3D G3DSA:2.40.40.20 812 938 7.3E-27 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 SMART SM00926 257 311 3.3E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Gene3D G3DSA:3.30.70.20 126 208 2.5E-20 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Pfam PF00384 Molybdopterin oxidoreductase 314 738 1.1E-88 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 258 311 1.6E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 SUPERFAMILY SSF53706 251 784 3.93E-195 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Pfam PF12838 4Fe-4S dicluster domain 146 204 3.5E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MC28_2722 012ca1017b51c34adc3a541de249fddf 975 PIRSF PIRSF036643 1 964 0.0 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Gene3D G3DSA:3.40.228.10 392 591 2.2E-163 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 262 930 2.5E-249 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Pfam PF01568 Molydopterin dinucleotide binding domain 820 927 1.1E-20 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 SUPERFAMILY SSF54292 1 124 5.32E-33 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Gene3D G3DSA:3.40.50.740 319 778 2.2E-163 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Gene3D G3DSA:3.10.20.740 1 122 1.1E-30 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 120 2.3E-10 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 71 1.6E-16 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 SUPERFAMILY SSF54862 132 215 4.6E-17 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 Gene3D G3DSA:2.20.25.90 257 312 4.6E-19 T 14-10-2018 MC28_2722 012ca1017b51c34adc3a541de249fddf 975 SUPERFAMILY SSF50692 785 932 8.14E-35 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily MC28_3518 231adfb6c4a08add48f0c78d649f91d9 447 Pfam PF02347 Glycine cleavage system P-protein 3 442 2.1E-162 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 MC28_3518 231adfb6c4a08add48f0c78d649f91d9 447 Gene3D G3DSA:3.90.1150.10 73 442 9.2E-169 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3518 231adfb6c4a08add48f0c78d649f91d9 447 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 51.697 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 MC28_3518 231adfb6c4a08add48f0c78d649f91d9 447 Gene3D G3DSA:3.40.640.10 84 349 9.2E-169 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3518 231adfb6c4a08add48f0c78d649f91d9 447 PIRSF PIRSF006815 3 447 7.1E-193 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 MC28_3518 231adfb6c4a08add48f0c78d649f91d9 447 SUPERFAMILY SSF53383 3 445 3.7E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_4705 d0eccaf3cf02fe24c2538a7d557726c4 172 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 172 1.5E-48 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 MC28_4705 d0eccaf3cf02fe24c2538a7d557726c4 172 Hamap MF_00984 Single-stranded DNA-binding protein. 1 106 37.567 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 MC28_4705 d0eccaf3cf02fe24c2538a7d557726c4 172 Gene3D G3DSA:2.40.50.140 1 109 5.1E-46 T 14-10-2018 MC28_4705 d0eccaf3cf02fe24c2538a7d557726c4 172 Pfam PF00436 Single-strand binding protein family 1 102 7.1E-39 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 MC28_4705 d0eccaf3cf02fe24c2538a7d557726c4 172 SUPERFAMILY SSF50249 1 172 1.82E-57 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4705 d0eccaf3cf02fe24c2538a7d557726c4 172 PIRSF PIRSF002070 1 154 1.1E-40 T 14-10-2018 MC28_0282 4d78f4ec8bfda5122aca841773b1c5db 403 PIRSF PIRSF037259 1 403 1.8E-136 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 MC28_0282 4d78f4ec8bfda5122aca841773b1c5db 403 Pfam PF05975 Bacterial ABC transporter protein EcsB 5 382 3.2E-123 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 313 4.0E-127 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 Gene3D G3DSA:3.30.1360.10 16 221 1.4E-90 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 6.0E-26 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 SUPERFAMILY SSF55257 5 230 7.06E-33 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 Gene3D G3DSA:2.170.120.12 50 170 1.4E-90 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 5.8E-24 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 SMART SM00662 20 227 1.9E-107 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 152 6.7E-25 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.78 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 SUPERFAMILY SSF47789 247 313 9.29E-25 T 14-10-2018 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 Gene3D G3DSA:1.10.150.20 237 314 1.7E-34 T 14-10-2018 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 SUPERFAMILY SSF56553 50 171 1.31E-44 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4849 da80a6f8af08c7570750a95ef56c673e 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 2.4E-29 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_2368 e083d2e9db1d2d0bc27913173f50901c 283 SUPERFAMILY SSF56281 31 274 2.49E-25 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_2368 e083d2e9db1d2d0bc27913173f50901c 283 SMART SM00849 33 268 0.0017 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2368 e083d2e9db1d2d0bc27913173f50901c 283 Pfam PF00753 Metallo-beta-lactamase superfamily 32 268 3.1E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2368 e083d2e9db1d2d0bc27913173f50901c 283 Gene3D G3DSA:3.60.15.10 4 283 3.8E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_F151 3ac01e3b352a3c4696417c514e818939 254 SMART SM00420 6 58 8.8E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_F151 3ac01e3b352a3c4696417c514e818939 254 SUPERFAMILY SSF100950 76 231 1.57E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_F151 3ac01e3b352a3c4696417c514e818939 254 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.6E-44 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain MC28_F151 3ac01e3b352a3c4696417c514e818939 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 MC28_F151 3ac01e3b352a3c4696417c514e818939 254 SUPERFAMILY SSF46785 4 76 2.39E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_F151 3ac01e3b352a3c4696417c514e818939 254 Pfam PF08220 DeoR-like helix-turn-helix domain 9 59 8.3E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_F151 3ac01e3b352a3c4696417c514e818939 254 Gene3D G3DSA:1.10.10.10 1 59 1.9E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F151 3ac01e3b352a3c4696417c514e818939 254 SMART SM01134 73 232 8.1E-54 T 14-10-2018 MC28_2976 78765b4d0d82662b48f99c0679e88564 421 Pfam PF00817 impB/mucB/samB family 15 165 1.0E-26 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_2976 78765b4d0d82662b48f99c0679e88564 421 Gene3D G3DSA:3.30.70.270 12 169 2.9E-27 T 14-10-2018 MC28_2976 78765b4d0d82662b48f99c0679e88564 421 Pfam PF11799 impB/mucB/samB family C-terminal domain 254 363 2.0E-16 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_2976 78765b4d0d82662b48f99c0679e88564 421 Gene3D G3DSA:3.30.1490.100 259 365 4.1E-10 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_2976 78765b4d0d82662b48f99c0679e88564 421 Gene3D G3DSA:1.10.150.20 193 245 7.2E-14 T 14-10-2018 MC28_2976 78765b4d0d82662b48f99c0679e88564 421 SUPERFAMILY SSF100879 260 357 1.57E-11 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_2976 78765b4d0d82662b48f99c0679e88564 421 Pfam PF11798 IMS family HHH motif 181 213 1.3E-7 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 MC28_2976 78765b4d0d82662b48f99c0679e88564 421 SUPERFAMILY SSF56672 10 249 1.07E-50 T 14-10-2018 MC28_2976 78765b4d0d82662b48f99c0679e88564 421 Gene3D G3DSA:2.30.40.20 31 82 2.9E-27 T 14-10-2018 MC28_1629 67986408e9420abe90c5d60e611b7926 314 Pfam PF13508 Acetyltransferase (GNAT) domain 76 148 1.1E-10 T 14-10-2018 IPR000182 GNAT domain MC28_1629 67986408e9420abe90c5d60e611b7926 314 Pfam PF00805 Pentapeptide repeats (8 copies) 267 294 0.011 T 14-10-2018 IPR001646 Pentapeptide repeat MC28_1629 67986408e9420abe90c5d60e611b7926 314 Gene3D G3DSA:3.40.630.30 2 163 2.7E-20 T 14-10-2018 MC28_1629 67986408e9420abe90c5d60e611b7926 314 SUPERFAMILY SSF55729 10 157 2.62E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1629 67986408e9420abe90c5d60e611b7926 314 SUPERFAMILY SSF141571 175 303 2.22E-20 T 14-10-2018 MC28_1629 67986408e9420abe90c5d60e611b7926 314 Gene3D G3DSA:2.160.20.80 168 305 3.8E-17 T 14-10-2018 MC28_1629 67986408e9420abe90c5d60e611b7926 314 Pfam PF13599 Pentapeptide repeats (9 copies) 177 253 7.3E-15 T 14-10-2018 IPR001646 Pentapeptide repeat MC28_0060 5e3ffc990fe1e78c5d001b3352ad1c0d 551 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 9 316 1.9E-75 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 MC28_0060 5e3ffc990fe1e78c5d001b3352ad1c0d 551 SUPERFAMILY SSF109755 336 539 5.44E-48 T 14-10-2018 MC28_0060 5e3ffc990fe1e78c5d001b3352ad1c0d 551 Gene3D G3DSA:1.20.58.220 450 546 3.7E-22 T 14-10-2018 IPR038078 PhoU-like domain superfamily MC28_0060 5e3ffc990fe1e78c5d001b3352ad1c0d 551 Gene3D G3DSA:1.20.58.220 338 446 7.8E-14 T 14-10-2018 IPR038078 PhoU-like domain superfamily MC28_0060 5e3ffc990fe1e78c5d001b3352ad1c0d 551 Pfam PF02690 Na+/Pi-cotransporter 147 253 7.9E-20 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 MC28_0060 5e3ffc990fe1e78c5d001b3352ad1c0d 551 Pfam PF02690 Na+/Pi-cotransporter 18 153 1.0E-50 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 MC28_0060 5e3ffc990fe1e78c5d001b3352ad1c0d 551 Pfam PF01895 PhoU domain 453 536 1.4E-18 T 14-10-2018 IPR026022 PhoU domain MC28_0060 5e3ffc990fe1e78c5d001b3352ad1c0d 551 Pfam PF01895 PhoU domain 348 434 1.4E-11 T 14-10-2018 IPR026022 PhoU domain MC28_0845 6fb64defbf6d486c1c44384119c87ed6 219 Gene3D G3DSA:3.30.420.10 73 217 1.4E-27 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_0845 6fb64defbf6d486c1c44384119c87ed6 219 Pfam PF13456 Reverse transcriptase-like 78 205 6.5E-14 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 MC28_0845 6fb64defbf6d486c1c44384119c87ed6 219 SUPERFAMILY SSF53098 74 208 1.64E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_4177 a2122d3db8d5c33db89427a7fb48a565 130 Pfam PF08810 Kinase associated protein B 18 129 1.0E-48 T 14-10-2018 IPR014916 Kinase associated protein B MC28_4177 a2122d3db8d5c33db89427a7fb48a565 130 SMART SM01298 18 130 2.4E-73 T 14-10-2018 IPR014916 Kinase associated protein B MC28_4177 a2122d3db8d5c33db89427a7fb48a565 130 SUPERFAMILY SSF141251 7 129 1.01E-51 T 14-10-2018 IPR038080 Kinase associated protein B superfamily MC28_4177 a2122d3db8d5c33db89427a7fb48a565 130 Gene3D G3DSA:2.30.30.430 1 130 1.8E-54 T 14-10-2018 IPR038080 Kinase associated protein B superfamily MC28_0073 f5a7fcbfd44bfb5a92801a6e2422a150 383 Pfam PF02687 FtsX-like permease family 289 376 5.8E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_0073 f5a7fcbfd44bfb5a92801a6e2422a150 383 Pfam PF12704 MacB-like periplasmic core domain 13 222 1.3E-22 T 14-10-2018 IPR025857 MacB-like periplasmic core domain MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 SUPERFAMILY SSF53098 314 481 2.58E-45 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 Pfam PF00476 DNA polymerase family A 512 888 4.4E-161 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 Gene3D G3DSA:1.20.1060.10 505 619 3.1E-44 T 14-10-2018 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 Gene3D G3DSA:3.40.50.1010 18 291 5.3E-101 T 14-10-2018 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 SMART SM00279 186 221 5.0E-17 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 SUPERFAMILY SSF56672 484 890 2.0E-159 T 14-10-2018 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 SMART SM00474 314 480 1.4E-12 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 Gene3D G3DSA:1.10.150.20 187 260 5.3E-101 T 14-10-2018 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 SMART SM00475 16 275 3.0E-152 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 TIGRFAM TIGR00593 pola: DNA polymerase I 18 890 0.0 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 SUPERFAMILY SSF47807 184 299 2.84E-33 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 185 278 8.3E-36 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 Gene3D G3DSA:3.30.420.10 311 503 1.1E-66 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 Gene3D G3DSA:3.30.70.370 625 886 1.2E-109 T 14-10-2018 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 Gene3D G3DSA:1.10.150.20 671 814 1.2E-109 T 14-10-2018 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 SUPERFAMILY SSF88723 15 182 6.87E-57 T 14-10-2018 IPR029060 PIN-like domain superfamily MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 ProSitePatterns PS00447 DNA polymerase family A signature. 716 735 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 SMART SM00482 647 854 4.6E-118 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 764 1.8E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 PRINTS PR00868 DNA-polymerase family A (pol I) signature 775 786 1.8E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 PRINTS PR00868 DNA-polymerase family A (pol I) signature 807 823 1.8E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 PRINTS PR00868 DNA-polymerase family A (pol I) signature 639 654 1.8E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 PRINTS PR00868 DNA-polymerase family A (pol I) signature 662 685 1.8E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 PRINTS PR00868 DNA-polymerase family A (pol I) signature 616 638 1.8E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 PRINTS PR00868 DNA-polymerase family A (pol I) signature 692 705 1.8E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 PRINTS PR00868 DNA-polymerase family A (pol I) signature 837 850 1.8E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 PRINTS PR00868 DNA-polymerase family A (pol I) signature 716 741 1.8E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3865 9b5de458f1610d7e8512ebfb98d94386 890 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 17 182 2.9E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 MC28_2718 40c6e40cc8a6e9ea17507f6f39397466 307 Pfam PF04055 Radical SAM superfamily 16 152 1.4E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_2718 40c6e40cc8a6e9ea17507f6f39397466 307 Gene3D G3DSA:3.20.20.70 1 307 3.2E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2718 40c6e40cc8a6e9ea17507f6f39397466 307 SUPERFAMILY SSF102114 4 279 5.1E-64 T 14-10-2018 MC28_2718 40c6e40cc8a6e9ea17507f6f39397466 307 Pfam PF06463 Molybdenum Cofactor Synthesis C 160 285 9.3E-37 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_2718 40c6e40cc8a6e9ea17507f6f39397466 307 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 9 307 1.3E-98 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4136 7da74ea2fd47114eb1d091a2d5afb1a0 367 Pfam PF03841 L-seryl-tRNA selenium transferase 57 278 1.6E-12 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 MC28_4136 7da74ea2fd47114eb1d091a2d5afb1a0 367 Gene3D G3DSA:3.40.640.10 24 277 5.1E-48 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_4136 7da74ea2fd47114eb1d091a2d5afb1a0 367 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 6 364 1.1E-167 T 14-10-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 MC28_4136 7da74ea2fd47114eb1d091a2d5afb1a0 367 SUPERFAMILY SSF53383 10 362 3.98E-37 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 413 2.6E-44 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 Gene3D G3DSA:3.90.110.10 171 446 1.6E-87 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 SUPERFAMILY SSF56327 173 440 8.24E-80 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 SUPERFAMILY SSF51735 4 168 7.89E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.9E-46 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.9E-46 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.9E-46 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.9E-46 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 1.9E-46 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 1.9E-46 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.9E-46 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 Gene3D G3DSA:3.40.50.720 1 170 1.4E-67 T 14-10-2018 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 MC28_F119 10ce4587a8365d7892b301e345f21e9f 460 Pfam PF02056 Family 4 glycosyl hydrolase 6 177 7.3E-65 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_F249 83bfbf0727c995a8f37fc9117936ffb7 659 Gene3D G3DSA:2.60.40.10 517 603 1.2E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_F249 83bfbf0727c995a8f37fc9117936ffb7 659 Pfam PF11958 Domain of unknown function (DUF3472) 102 260 4.2E-26 T 14-10-2018 IPR021862 Protein of unknown function DUF3472 MC28_F249 83bfbf0727c995a8f37fc9117936ffb7 659 SMART SM00060 519 592 1.9E-8 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_F249 83bfbf0727c995a8f37fc9117936ffb7 659 Gene3D G3DSA:2.10.10.20 609 656 2.8E-6 T 14-10-2018 MC28_F249 83bfbf0727c995a8f37fc9117936ffb7 659 Pfam PF03272 Putative mucin or carbohydrate-binding module 390 503 1.1E-28 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_F249 83bfbf0727c995a8f37fc9117936ffb7 659 SUPERFAMILY SSF51055 608 641 1.83E-5 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_F249 83bfbf0727c995a8f37fc9117936ffb7 659 SUPERFAMILY SSF49265 511 604 3.85E-15 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_4986 114597f517c44a39252c50c0453e050d 229 Pfam PF12730 ABC-2 family transporter protein 1 170 4.2E-33 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 PIRSF PIRSF006487 1 366 7.1E-110 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 260 6.3E-98 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 364 48.677 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 358 7.1E-29 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 Gene3D G3DSA:3.30.70.1400 53 138 6.2E-94 T 14-10-2018 MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 Gene3D G3DSA:3.30.1360.120 6 237 6.2E-94 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 Gene3D G3DSA:4.10.1250.10 238 281 1.6E-18 T 14-10-2018 MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 SUPERFAMILY SSF103025 4 282 1.27E-101 T 14-10-2018 MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 SUPERFAMILY SSF101790 275 364 3.27E-27 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 364 1.3E-145 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 MC28_3519 d48b13d7e842bb29022919c9d7fe7cc8 366 Gene3D G3DSA:2.40.30.110 282 364 1.7E-32 T 14-10-2018 MC28_3100 e63368f29be92054b41ed11526d4e722 154 Gene3D G3DSA:1.20.120.450 1 150 3.2E-39 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_3100 e63368f29be92054b41ed11526d4e722 154 SUPERFAMILY SSF109854 1 147 1.14E-34 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_3100 e63368f29be92054b41ed11526d4e722 154 Pfam PF04978 Protein of unknown function (DUF664) 1 144 1.2E-8 T 14-10-2018 IPR007061 Protein of unknown function DUF664 MC28_4673 c085fc181a71de43c4ce3d1323c70a99 145 Hamap MF_01141 Antiholin-like protein LrgA [lrgA]. 1 137 29.087 T 14-10-2018 IPR023736 Antiholin-like protein LrgA MC28_4673 c085fc181a71de43c4ce3d1323c70a99 145 Pfam PF03788 LrgA family 21 112 1.5E-23 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 MC28_1336 26c6ce5c9cf294e127c6008781406a90 742 Pfam PF01841 Transglutaminase-like superfamily 423 547 5.2E-27 T 14-10-2018 IPR002931 Transglutaminase-like MC28_1336 26c6ce5c9cf294e127c6008781406a90 742 SUPERFAMILY SSF54001 351 664 6.28E-55 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_1336 26c6ce5c9cf294e127c6008781406a90 742 Pfam PF13559 Domain of unknown function (DUF4129) 657 723 8.4E-7 T 14-10-2018 IPR025403 Domain of unknown function DUF4129 MC28_1336 26c6ce5c9cf294e127c6008781406a90 742 Gene3D G3DSA:3.10.620.30 376 559 9.7E-26 T 14-10-2018 MC28_1336 26c6ce5c9cf294e127c6008781406a90 742 SMART SM00460 472 549 9.3E-21 T 14-10-2018 IPR002931 Transglutaminase-like MC28_1350 5145eb23481a9cceea6addd39278718e 389 Pfam PF07690 Major Facilitator Superfamily 16 340 4.0E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1350 5145eb23481a9cceea6addd39278718e 389 SUPERFAMILY SSF103473 16 379 6.93E-60 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1350 5145eb23481a9cceea6addd39278718e 389 Gene3D G3DSA:1.20.1250.20 2 178 1.3E-37 T 14-10-2018 MC28_1350 5145eb23481a9cceea6addd39278718e 389 Gene3D G3DSA:1.20.1250.20 187 384 6.3E-51 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 108 610 1.4E-84 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 85 388 5.3E-96 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 SUPERFAMILY SSF81653 138 235 6.15E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 85 636 3.1E-187 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 338 344 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 ProSitePatterns PS01229 Hypothetical cof family signature 2. 534 556 - T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 Pfam PF00122 E1-E2 ATPase 136 316 1.1E-50 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00941 Cadmium-transporting ATPase signature 220 234 2.3E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00941 Cadmium-transporting ATPase signature 140 156 2.3E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00941 Cadmium-transporting ATPase signature 65 77 2.3E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00941 Cadmium-transporting ATPase signature 201 217 2.3E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00941 Cadmium-transporting ATPase signature 48 65 2.3E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00941 Cadmium-transporting ATPase signature 120 140 2.3E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 547 2.1E-42 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 SUPERFAMILY SSF56784 335 633 4.49E-56 T 14-10-2018 IPR036412 HAD-like superfamily MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 97 636 2.5E-121 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 SUPERFAMILY SSF81665 87 617 1.57E-16 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 Gene3D G3DSA:3.40.1110.10 347 466 2.9E-88 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 Gene3D G3DSA:3.40.50.1000 317 585 2.9E-88 T 14-10-2018 IPR023214 HAD superfamily MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 459 470 2.6E-29 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 569 2.6E-29 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 2.6E-29 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 481 491 2.6E-29 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 185 199 2.6E-29 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 553 2.6E-29 T 14-10-2018 MC28_5135 e768aaf46d5fc7ffbff937598d63cfc7 641 Gene3D G3DSA:2.70.150.20 129 240 2.6E-35 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 Gene3D G3DSA:1.20.1110.10 55 884 0.0 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 SUPERFAMILY SSF81665 2 887 1.18E-136 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 Pfam PF00122 E1-E2 ATPase 112 309 4.3E-55 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 523 4.1E-43 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 544 4.1E-43 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 650 4.1E-43 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 633 4.1E-43 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 162 176 4.1E-43 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 329 343 4.1E-43 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 Pfam PF00689 Cation transporting ATPase, C-terminus 699 885 3.0E-51 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 Pfam PF00690 Cation transporter/ATPase, N-terminus 4 72 1.2E-20 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 SUPERFAMILY SSF81660 336 516 3.92E-52 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 SMART SM00831 3 77 1.4E-25 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 Gene3D G3DSA:2.70.150.10 16 232 0.0 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 628 3.3E-23 T 14-10-2018 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 Gene3D G3DSA:3.40.1110.10 339 519 0.0 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 SUPERFAMILY SSF56784 327 718 6.18E-63 T 14-10-2018 IPR036412 HAD-like superfamily MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 219 355 6.0E-29 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 84 183 6.4E-21 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 584 701 1.4E-36 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 331 337 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 SUPERFAMILY SSF81653 115 228 1.83E-30 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 MC28_5130 162495350c8c92e9d7855e2e286bb55b 888 Gene3D G3DSA:3.40.50.1000 326 659 0.0 T 14-10-2018 IPR023214 HAD superfamily MC28_1856 9683673fa7e2509a74119042c901d6a1 139 Pfam PF07301 Protein of unknown function (DUF1453) 5 134 2.2E-6 T 14-10-2018 IPR009916 Protein of unknown function DUF1453 MC28_1856 9683673fa7e2509a74119042c901d6a1 139 ProDom PD093362 MEMBRANE UNCHARACTERIZED YXJN HOMOLOG B.SUBTILIS PROTEIN TRANSMEMBRANE 1 138 6.0E-58 T 14-10-2018 IPR020223 Uncharacterised protein YxjN MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 SUPERFAMILY SSF46689 57 111 3.18E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 Gene3D G3DSA:1.10.10.60 58 116 6.4E-15 T 14-10-2018 MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 SUPERFAMILY SSF46689 6 55 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 Pfam PF12833 Helix-turn-helix domain 28 104 8.3E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 SMART SM00871 128 288 8.0E-35 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 Gene3D G3DSA:1.10.10.60 2 57 1.9E-13 T 14-10-2018 MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 SUPERFAMILY SSF55136 128 290 1.05E-31 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 Gene3D G3DSA:3.20.80.10 128 290 1.2E-40 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 SMART SM00342 21 104 4.3E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 5.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 5.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_4117 84d02f1e49c85fb6e46563156fe2e860 290 Pfam PF06445 GyrI-like small molecule binding domain 128 287 8.2E-30 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain MC28_D158 0f89944735129cd1447f90cd3fcf69d7 362 SMART SM00028 217 250 45.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_D158 0f89944735129cd1447f90cd3fcf69d7 362 SMART SM00028 136 169 470.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_D158 0f89944735129cd1447f90cd3fcf69d7 362 SMART SM00028 177 210 0.51 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_D158 0f89944735129cd1447f90cd3fcf69d7 362 SMART SM00028 96 129 80.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_D158 0f89944735129cd1447f90cd3fcf69d7 362 Pfam PF13181 Tetratricopeptide repeat 217 241 0.19 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_D158 0f89944735129cd1447f90cd3fcf69d7 362 Pfam PF13181 Tetratricopeptide repeat 180 205 0.039 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_D158 0f89944735129cd1447f90cd3fcf69d7 362 Gene3D G3DSA:1.25.40.10 6 361 1.8E-96 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_D158 0f89944735129cd1447f90cd3fcf69d7 362 SUPERFAMILY SSF48452 89 283 5.8E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 Pfam PF00149 Calcineurin-like phosphoesterase 40 258 1.2E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 SUPERFAMILY SSF56300 32 343 1.78E-74 T 14-10-2018 MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 PRINTS PR01607 Apyrase family signature 37 55 3.7E-9 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 PRINTS PR01607 Apyrase family signature 241 264 3.7E-9 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 PRINTS PR01607 Apyrase family signature 214 231 3.7E-9 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 PRINTS PR01607 Apyrase family signature 268 288 3.7E-9 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 SUPERFAMILY SSF55816 356 569 7.46E-27 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 Pfam PF02872 5'-nucleotidase, C-terminal domain 357 508 1.7E-24 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 Gene3D G3DSA:3.60.21.10 30 333 1.0E-78 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_1931 bc3c7d9d527a26c074dd6bf4966ed3c9 648 Gene3D G3DSA:3.90.780.10 346 553 4.1E-33 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_4945 4043cd471654beea5cc8bb33dab03047 154 SMART SM00731 6 150 1.5E-51 T 14-10-2018 IPR006640 SprT-like MC28_4945 4043cd471654beea5cc8bb33dab03047 154 Hamap MF_00745 Protein SprT-like. 6 150 41.219 T 14-10-2018 IPR023524 Uncharacterised protein family SprT-like MC28_4945 4043cd471654beea5cc8bb33dab03047 154 Pfam PF17283 SprT-like zinc ribbon domain 115 149 2.7E-7 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain MC28_4945 4043cd471654beea5cc8bb33dab03047 154 Pfam PF10263 SprT-like family 9 99 6.1E-13 T 14-10-2018 IPR006640 SprT-like MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 586 34.905 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 Gene3D G3DSA:3.30.1360.30 277 421 3.6E-196 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 Pfam PF01336 OB-fold nucleic acid binding domain 20 105 2.6E-17 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 195 207 6.1E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 212 225 6.1E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 476 492 6.1E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 520 534 6.1E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 SUPERFAMILY SSF50249 4 108 7.43E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 SUPERFAMILY SSF55261 294 421 8.67E-45 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 Gene3D G3DSA:2.40.50.140 1 110 6.9E-34 T 14-10-2018 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 Gene3D G3DSA:3.30.930.10 121 584 3.6E-196 T 14-10-2018 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 Pfam PF02938 GAD domain 313 407 4.7E-32 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 SUPERFAMILY SSF55681 113 585 1.45E-109 T 14-10-2018 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 586 2.7E-262 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 MC28_3693 6d4a84aad48cff1d23579208fe9d568b 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 559 1.5E-111 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4899 78eb5249eaa519970c9a63d29691d1eb 283 Pfam PF06800 Sugar transport protein 4 280 1.4E-99 T 14-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 MC28_4899 78eb5249eaa519970c9a63d29691d1eb 283 SUPERFAMILY SSF103481 187 280 2.09E-6 T 14-10-2018 MC28_4899 78eb5249eaa519970c9a63d29691d1eb 283 SUPERFAMILY SSF103481 36 138 2.03E-7 T 14-10-2018 MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 76 6.8E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 SUPERFAMILY SSF46785 11 94 9.77E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 Pfam PF07729 FCD domain 88 207 1.9E-21 T 14-10-2018 IPR011711 GntR, C-terminal MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 SMART SM00345 19 77 4.3E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 SUPERFAMILY SSF48008 88 216 6.28E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 Gene3D G3DSA:1.20.120.530 82 218 1.7E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 Gene3D G3DSA:1.10.10.10 3 79 3.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 7.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 7.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0953 a5f9225b45b30621f3c09c4a9c7a25e7 224 SMART SM00895 87 211 8.3E-8 T 14-10-2018 IPR011711 GntR, C-terminal MC28_D026 9c35000cb592f9bec27907b243a37e04 613 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 110 343 1.3E-35 T 14-10-2018 IPR000477 Reverse transcriptase domain MC28_D026 9c35000cb592f9bec27907b243a37e04 613 SUPERFAMILY SSF56672 34 355 1.04E-41 T 14-10-2018 MC28_D026 9c35000cb592f9bec27907b243a37e04 613 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 53 420 1.2E-99 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase MC28_D126 9c35000cb592f9bec27907b243a37e04 613 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 110 343 1.3E-35 T 14-10-2018 IPR000477 Reverse transcriptase domain MC28_D126 9c35000cb592f9bec27907b243a37e04 613 SUPERFAMILY SSF56672 34 355 1.04E-41 T 14-10-2018 MC28_D126 9c35000cb592f9bec27907b243a37e04 613 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 53 420 1.2E-99 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 SMART SM00534 328 513 2.6E-76 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 Pfam PF01713 Smr domain 711 786 1.2E-19 T 14-10-2018 IPR002625 Smr domain MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 SUPERFAMILY SSF48334 17 287 1.16E-30 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 785 22.1 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 Pfam PF00488 MutS domain V 331 512 6.1E-35 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 SMART SM00463 708 786 9.2E-19 T 14-10-2018 IPR002625 Smr domain MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 SUPERFAMILY SSF52540 292 514 2.45E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 SUPERFAMILY SSF160443 709 780 1.26E-9 T 14-10-2018 IPR036063 Smr domain superfamily MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 PIRSF PIRSF005814 1 786 1.6E-277 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 SMART SM00533 9 315 1.5E-35 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 Gene3D G3DSA:1.10.1420.10 138 259 1.9E-10 T 14-10-2018 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 Gene3D G3DSA:1.10.1420.10 18 281 1.9E-10 T 14-10-2018 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 Gene3D G3DSA:3.30.1370.110 699 786 1.7E-23 T 14-10-2018 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 786 2.4E-272 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 MC28_3832 b634f4de6d2cca0961f9177fbfa7e44e 786 Gene3D G3DSA:3.40.50.300 293 599 2.4E-82 T 14-10-2018 MC28_2405 a556973f878f2d9ab14221566c1daa40 246 Pfam PF13930 DNA/RNA non-specific endonuclease 101 230 7.3E-38 T 14-10-2018 MC28_2405 a556973f878f2d9ab14221566c1daa40 246 Gene3D G3DSA:3.40.570.10 153 242 1.0E-5 T 14-10-2018 MC28_2666 bc6bf780facfd1d76e359b43e8d1d74e 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2666 bc6bf780facfd1d76e359b43e8d1d74e 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2666 bc6bf780facfd1d76e359b43e8d1d74e 203 Pfam PF08360 QacR-like protein, C-terminal region 69 157 1.8E-4 T 14-10-2018 IPR013571 Transcription regulator QacR, C-terminal GO:0003700|GO:0045892 MC28_2666 bc6bf780facfd1d76e359b43e8d1d74e 203 Gene3D G3DSA:1.10.357.10 53 202 4.0E-20 T 14-10-2018 MC28_2666 bc6bf780facfd1d76e359b43e8d1d74e 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 52 2.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2666 bc6bf780facfd1d76e359b43e8d1d74e 203 Gene3D G3DSA:1.10.10.60 1 52 8.2E-10 T 14-10-2018 MC28_2666 bc6bf780facfd1d76e359b43e8d1d74e 203 SUPERFAMILY SSF48498 77 199 4.45E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_2666 bc6bf780facfd1d76e359b43e8d1d74e 203 SUPERFAMILY SSF46689 4 65 5.64E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1938 043928668501844365f2757d7fc8d2d3 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 7.5E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1938 043928668501844365f2757d7fc8d2d3 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 227 241 7.5E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1938 043928668501844365f2757d7fc8d2d3 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 7.5E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1938 043928668501844365f2757d7fc8d2d3 284 SUPERFAMILY SSF53474 2 280 1.43E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1938 043928668501844365f2757d7fc8d2d3 284 Pfam PF00561 alpha/beta hydrolase fold 24 267 3.5E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1938 043928668501844365f2757d7fc8d2d3 284 Gene3D G3DSA:3.40.50.1820 1 283 1.6E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 SUPERFAMILY SSF53187 13 420 6.57E-40 T 14-10-2018 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 Pfam PF01546 Peptidase family M20/M25/M40 74 420 1.6E-10 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 9 425 1.6E-148 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 Pfam PF07687 Peptidase dimerisation domain 213 291 2.8E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 PRINTS PR00934 X-His dipeptidase (M25) signature 252 271 1.9E-34 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 PRINTS PR00934 X-His dipeptidase (M25) signature 136 153 1.9E-34 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 PRINTS PR00934 X-His dipeptidase (M25) signature 160 178 1.9E-34 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 PRINTS PR00934 X-His dipeptidase (M25) signature 102 120 1.9E-34 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 PRINTS PR00934 X-His dipeptidase (M25) signature 365 383 1.9E-34 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 PRINTS PR00934 X-His dipeptidase (M25) signature 81 100 1.9E-34 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 PRINTS PR00934 X-His dipeptidase (M25) signature 207 224 1.9E-34 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 Gene3D G3DSA:3.40.630.10 2 264 6.5E-55 T 14-10-2018 MC28_1691 2293646d783f2ac5c1563f40ebfba1dd 445 PIRSF PIRSF016599 2 436 2.0E-159 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 MC28_0754 2ba14b89ce1068d37648b0b495909242 197 Pfam PF08864 UPF0302 domain 28 132 7.5E-47 T 14-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal MC28_0754 2ba14b89ce1068d37648b0b495909242 197 SMART SM00914 158 194 1.7E-14 T 14-10-2018 IPR014957 IDEAL domain MC28_0754 2ba14b89ce1068d37648b0b495909242 197 Gene3D G3DSA:4.10.810.10 143 197 2.4E-26 T 14-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 MC28_0754 2ba14b89ce1068d37648b0b495909242 197 PIRSF PIRSF007165 20 197 5.6E-83 T 14-10-2018 IPR011188 Uncharacterised protein family UPF0302 MC28_0754 2ba14b89ce1068d37648b0b495909242 197 Hamap MF_00760 UPF0302 protein . 21 197 33.366 T 14-10-2018 IPR011188 Uncharacterised protein family UPF0302 MC28_0754 2ba14b89ce1068d37648b0b495909242 197 Gene3D G3DSA:1.20.1440.290 18 142 1.3E-56 T 14-10-2018 IPR038091 UPF0302, N-terminal domain superfamily MC28_0754 2ba14b89ce1068d37648b0b495909242 197 Pfam PF08858 IDEAL domain 158 194 3.5E-16 T 14-10-2018 IPR014957 IDEAL domain MC28_5260 528415aa5c6ace93d60175eba449d01c 151 PIRSF PIRSF000239 1 149 1.5E-28 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 MC28_5260 528415aa5c6ace93d60175eba449d01c 151 Gene3D G3DSA:3.40.30.10 2 151 8.5E-54 T 14-10-2018 MC28_5260 528415aa5c6ace93d60175eba449d01c 151 SUPERFAMILY SSF52833 1 151 6.7E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_5260 528415aa5c6ace93d60175eba449d01c 151 Pfam PF00578 AhpC/TSA family 4 131 4.2E-41 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 Pfam PF00455 DeoR C terminal sensor domain 75 228 3.1E-46 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 SMART SM01134 73 231 6.9E-62 T 14-10-2018 MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.9E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.9E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 6.1E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 SUPERFAMILY SSF100950 74 231 7.64E-36 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 SUPERFAMILY SSF46785 5 75 4.99E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 Gene3D G3DSA:1.10.10.10 8 66 4.4E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2882 6b6e740fcbac1b351f0afc9f14ed0585 250 SMART SM00420 6 58 1.7E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_0383 bcd3e532869691f7381a7e139c678eb8 285 SUPERFAMILY SSF109998 28 164 7.06E-16 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily MC28_0383 bcd3e532869691f7381a7e139c678eb8 285 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 163 184 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 MC28_0383 bcd3e532869691f7381a7e139c678eb8 285 Pfam PF13616 PPIC-type PPIASE domain 133 226 2.0E-25 T 14-10-2018 MC28_0383 bcd3e532869691f7381a7e139c678eb8 285 SUPERFAMILY SSF54534 121 224 1.64E-32 T 14-10-2018 MC28_0383 bcd3e532869691f7381a7e139c678eb8 285 Hamap MF_01145 Foldase protein PrsA [prsA]. 4 281 21.112 T 14-10-2018 IPR023059 Foldase protein PrsA GO:0003755 MC28_0383 bcd3e532869691f7381a7e139c678eb8 285 Gene3D G3DSA:3.10.50.40 127 248 7.5E-36 T 14-10-2018 MC28_4091 3a760bd6c07648830ad2506a815b405f 221 Pfam PF04012 PspA/IM30 family 2 218 6.3E-48 T 14-10-2018 IPR007157 PspA/IM30 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 SUPERFAMILY SSF88659 109 184 6.1E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_3365 81acc0d25ea27702d3db1c4643321619 252 Pfam PF04539 Sigma-70 region 3 115 184 1.5E-14 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 PRINTS PR00046 Major sigma-70 factor signature 85 93 1.5E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 PRINTS PR00046 Major sigma-70 factor signature 220 235 1.5E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 PRINTS PR00046 Major sigma-70 factor signature 61 74 1.5E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 PRINTS PR00046 Major sigma-70 factor signature 203 215 1.5E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 PRINTS PR00046 Major sigma-70 factor signature 235 246 1.5E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 Gene3D G3DSA:1.20.120.1810 2 104 4.4E-27 T 14-10-2018 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 Pfam PF04545 Sigma-70, region 4 199 247 2.3E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 Pfam PF04542 Sigma-70 region 2 38 105 4.2E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 22 250 1.6E-117 T 14-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 249 6.7E-39 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 30 250 2.6E-88 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 SUPERFAMILY SSF88946 6 105 1.7E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 PIRSF PIRSF000770 5 252 4.7E-35 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 Gene3D G3DSA:1.10.10.10 105 167 2.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3365 81acc0d25ea27702d3db1c4643321619 252 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 Gene3D G3DSA:1.10.10.10 179 252 2.3E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3365 81acc0d25ea27702d3db1c4643321619 252 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 220 246 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3365 81acc0d25ea27702d3db1c4643321619 252 SUPERFAMILY SSF88659 171 250 3.18E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 SMART SM00387 321 434 3.9E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 SUPERFAMILY SSF47384 192 276 7.65E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 SMART SM00388 209 275 4.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 3.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 3.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 3.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 3.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 Pfam PF00672 HAMP domain 156 204 3.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 SMART SM00304 153 208 2.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 SUPERFAMILY SSF55874 265 432 2.1E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 Gene3D G3DSA:3.30.565.10 282 436 4.8E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 SUPERFAMILY SSF158472 155 206 4.05E-5 T 14-10-2018 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 Gene3D G3DSA:1.10.287.130 157 276 2.7E-27 T 14-10-2018 MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 433 7.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0225 a1f10b614632c2bb0d7177689a3fddbc 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 275 6.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_3083 fff01d28ed7643bfe118c22a9bf0d06b 214 PIRSF PIRSF001461 1 214 7.8E-102 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 MC28_3083 fff01d28ed7643bfe118c22a9bf0d06b 214 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 MC28_3083 fff01d28ed7643bfe118c22a9bf0d06b 214 SUPERFAMILY SSF51366 1 213 6.52E-82 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 MC28_3083 fff01d28ed7643bfe118c22a9bf0d06b 214 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 MC28_3083 fff01d28ed7643bfe118c22a9bf0d06b 214 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 3.8E-93 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 MC28_3083 fff01d28ed7643bfe118c22a9bf0d06b 214 Gene3D G3DSA:3.20.20.70 1 214 3.8E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_3083 fff01d28ed7643bfe118c22a9bf0d06b 214 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 213 8.8E-98 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 MC28_4156 df835a1217c06b45dcdcbd9f17f3143b 367 Gene3D G3DSA:3.90.550.10 1 266 6.6E-92 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4156 df835a1217c06b45dcdcbd9f17f3143b 367 Gene3D G3DSA:2.160.10.10 267 366 1.6E-27 T 14-10-2018 MC28_4156 df835a1217c06b45dcdcbd9f17f3143b 367 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 362 47.151 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 MC28_4156 df835a1217c06b45dcdcbd9f17f3143b 367 SUPERFAMILY SSF53448 1 333 5.09E-84 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4156 df835a1217c06b45dcdcbd9f17f3143b 367 Pfam PF00483 Nucleotidyl transferase 1 252 1.0E-70 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 MC28_4156 df835a1217c06b45dcdcbd9f17f3143b 367 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 1 351 7.0E-146 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 MC28_4156 df835a1217c06b45dcdcbd9f17f3143b 367 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 4 23 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 MC28_4156 df835a1217c06b45dcdcbd9f17f3143b 367 SUPERFAMILY SSF51161 225 366 4.08E-15 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_4156 df835a1217c06b45dcdcbd9f17f3143b 367 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 91 99 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 MC28_2247 a83bdc430b0116f3c587a17b00ca54af 247 Gene3D G3DSA:3.60.21.10 1 245 1.6E-62 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_2247 a83bdc430b0116f3c587a17b00ca54af 247 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 192 3.2E-23 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 MC28_2247 a83bdc430b0116f3c587a17b00ca54af 247 SUPERFAMILY SSF56300 3 232 7.6E-52 T 14-10-2018 MC28_2247 a83bdc430b0116f3c587a17b00ca54af 247 PIRSF PIRSF000883 2 243 5.6E-57 T 14-10-2018 IPR011152 Phosphoesterase MJ0912 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 10 490 33.943 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 SUPERFAMILY SSF48163 304 489 8.63E-49 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 PRINTS PR00987 Glutamyl-tRNA synthetase signature 28 39 2.9E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 PRINTS PR00987 Glutamyl-tRNA synthetase signature 43 56 2.9E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 PRINTS PR00987 Glutamyl-tRNA synthetase signature 200 210 2.9E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 224 2.9E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 PRINTS PR00987 Glutamyl-tRNA synthetase signature 14 26 2.9E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 SUPERFAMILY SSF52374 10 322 7.78E-114 T 14-10-2018 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 Gene3D G3DSA:1.10.10.350 396 491 2.4E-32 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 Gene3D G3DSA:3.40.50.620 4 338 2.5E-141 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 10 329 1.6E-123 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 28 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4800 4cb41e1da96ff7a497e2bf5938bef1a9 491 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 10 488 3.9E-190 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 MC28_2138 40dd928b76543569ec07c8751229aae3 391 Pfam PF13530 Sterol carrier protein domain 180 387 1.1E-51 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain MC28_2138 40dd928b76543569ec07c8751229aae3 391 SUPERFAMILY SSF55729 6 285 2.83E-72 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2138 40dd928b76543569ec07c8751229aae3 391 Pfam PF13527 Acetyltransferase (GNAT) domain 10 132 6.6E-36 T 14-10-2018 MC28_2138 40dd928b76543569ec07c8751229aae3 391 SUPERFAMILY SSF55718 286 391 5.89E-26 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily MC28_2138 40dd928b76543569ec07c8751229aae3 391 Gene3D G3DSA:3.40.630.30 3 135 1.1E-56 T 14-10-2018 MC28_2138 40dd928b76543569ec07c8751229aae3 391 Gene3D G3DSA:3.30.1050.10 288 381 3.3E-26 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily MC28_2138 40dd928b76543569ec07c8751229aae3 391 Gene3D G3DSA:3.40.630.30 136 287 1.1E-64 T 14-10-2018 MC28_3276 ae97dd4a8c8b41dc3913fc40cdfb7059 78 TIGRFAM TIGR02196 GlrX_YruB: glutaredoxin-like protein, YruB-family 3 76 6.9E-31 T 14-10-2018 IPR011911 Glutaredoxin-like protein, YruB MC28_3276 ae97dd4a8c8b41dc3913fc40cdfb7059 78 Pfam PF00462 Glutaredoxin 4 63 6.5E-15 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 MC28_3276 ae97dd4a8c8b41dc3913fc40cdfb7059 78 Gene3D G3DSA:3.40.30.10 1 78 7.3E-26 T 14-10-2018 MC28_3276 ae97dd4a8c8b41dc3913fc40cdfb7059 78 SUPERFAMILY SSF52833 2 76 1.51E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_2414 15226ad56b724f7d68b9fa6aa2f4aaee 539 Gene3D G3DSA:2.30.40.10 9 506 6.9E-146 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_2414 15226ad56b724f7d68b9fa6aa2f4aaee 539 Gene3D G3DSA:3.20.20.140 62 490 6.9E-146 T 14-10-2018 MC28_2414 15226ad56b724f7d68b9fa6aa2f4aaee 539 SUPERFAMILY SSF51556 61 491 1.53E-36 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_2414 15226ad56b724f7d68b9fa6aa2f4aaee 539 Pfam PF07969 Amidohydrolase family 50 531 9.7E-94 T 14-10-2018 IPR013108 Amidohydrolase 3 MC28_2414 15226ad56b724f7d68b9fa6aa2f4aaee 539 SUPERFAMILY SSF51338 2 531 3.3E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_2414 15226ad56b724f7d68b9fa6aa2f4aaee 539 Gene3D G3DSA:3.10.310.70 80 200 6.9E-146 T 14-10-2018 MC28_F140 09cf579c23600b1855c22a0a4f775164 235 SMART SM00862 151 228 3.7E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_F140 09cf579c23600b1855c22a0a4f775164 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 4.3E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_F140 09cf579c23600b1855c22a0a4f775164 235 SUPERFAMILY SSF52172 8 183 8.11E-35 T 14-10-2018 IPR011006 CheY-like superfamily MC28_F140 09cf579c23600b1855c22a0a4f775164 235 Gene3D G3DSA:3.40.50.2300 1 124 3.3E-31 T 14-10-2018 MC28_F140 09cf579c23600b1855c22a0a4f775164 235 SMART SM00448 7 117 2.8E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_F140 09cf579c23600b1855c22a0a4f775164 235 Pfam PF00072 Response regulator receiver domain 9 117 1.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_F140 09cf579c23600b1855c22a0a4f775164 235 Gene3D G3DSA:1.10.10.10 125 229 9.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 SUPERFAMILY SSF101353 246 439 7.85E-68 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 Gene3D G3DSA:3.30.930.10 4 242 2.4E-94 T 14-10-2018 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 858 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 880 184.54 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 SUPERFAMILY SSF55186 555 720 1.28E-51 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 SUPERFAMILY SSF50447 457 555 2.22E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 Gene3D G3DSA:2.40.30.130 467 555 1.0E-10 T 14-10-2018 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 656 699 2.0E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 Gene3D G3DSA:3.10.310.40 768 877 7.0E-37 T 14-10-2018 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 SMART SM00863 656 699 8.1E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 Pfam PF01411 tRNA synthetases class II (A) 8 558 7.2E-213 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 Gene3D G3DSA:3.30.54.20 627 680 4.8E-51 T 14-10-2018 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 Gene3D G3DSA:3.30.980.10 565 700 4.8E-51 T 14-10-2018 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 Pfam PF02272 DHHA1 domain 736 875 1.6E-30 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 SUPERFAMILY SSF55681 5 245 1.32E-88 T 14-10-2018 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 8.8E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 8.8E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 301 314 8.8E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 8.8E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 MC28_3679 db6c3a2d64cf997deed54c5b3942a86d 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 277 293 8.8E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 MC28_G270 921bc83a430d374c72e8bd385e91517e 303 SMART SM00316 133 207 9.1 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_G270 921bc83a430d374c72e8bd385e91517e 303 SMART SM00316 221 286 0.87 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_G270 921bc83a430d374c72e8bd385e91517e 303 Gene3D G3DSA:2.40.50.140 133 219 1.4E-6 T 14-10-2018 MC28_G270 921bc83a430d374c72e8bd385e91517e 303 SUPERFAMILY SSF50249 151 216 4.13E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4207 f62dfc9f541ee64280bcb70370c65f6d 219 Gene3D G3DSA:3.40.50.300 5 218 3.2E-57 T 14-10-2018 MC28_4207 f62dfc9f541ee64280bcb70370c65f6d 219 SMART SM00382 22 205 1.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4207 f62dfc9f541ee64280bcb70370c65f6d 219 SUPERFAMILY SSF52540 1 206 3.26E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4207 f62dfc9f541ee64280bcb70370c65f6d 219 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4207 f62dfc9f541ee64280bcb70370c65f6d 219 Pfam PF00005 ABC transporter 18 156 1.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1370 eb8ea9afd6affa26f27033421eb19e40 517 Gene3D G3DSA:3.40.50.1820 39 312 1.7E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1370 eb8ea9afd6affa26f27033421eb19e40 517 SUPERFAMILY SSF53474 42 256 4.54E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3594 ce8fac7e3702db75a266d72ea73d2b71 156 SUPERFAMILY SSF55486 2 155 1.49E-46 T 14-10-2018 MC28_3594 ce8fac7e3702db75a266d72ea73d2b71 156 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 156 24.615 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 MC28_3594 ce8fac7e3702db75a266d72ea73d2b71 156 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 122 132 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site MC28_3594 ce8fac7e3702db75a266d72ea73d2b71 156 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 152 1.2E-43 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 MC28_3594 ce8fac7e3702db75a266d72ea73d2b71 156 Pfam PF02130 Uncharacterized protein family UPF0054 13 151 2.3E-50 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 MC28_3594 ce8fac7e3702db75a266d72ea73d2b71 156 Gene3D G3DSA:3.40.390.30 5 156 6.7E-47 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 MC28_0967 41ec45029f21e3b34b675b80f9165bfa 469 Pfam PF01554 MatE 263 423 6.0E-32 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0967 41ec45029f21e3b34b675b80f9165bfa 469 Pfam PF01554 MatE 34 194 4.3E-37 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0967 41ec45029f21e3b34b675b80f9165bfa 469 TIGRFAM TIGR00797 matE: MATE efflux family protein 34 437 3.2E-96 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0967 41ec45029f21e3b34b675b80f9165bfa 469 PIRSF PIRSF006603 8 468 1.0E-132 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_1687 979e7c1747af1371f858f9c1e5a6a0a9 246 ProDom PD120066 SPORULATION STAGE SA II SPOIISA TRANSMEMBRANE MEMBRANE KILLER 25 157 0.002 T 14-10-2018 MC28_1687 979e7c1747af1371f858f9c1e5a6a0a9 246 Pfam PF14171 Toxin SpoIISA, type II toxin-antitoxin system 10 244 8.8E-68 T 14-10-2018 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system GO:0009405|GO:0016021 MC28_0769 02e989a5f097b8e7139d58cb424575af 381 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 3 373 1.6E-181 T 14-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 MC28_0769 02e989a5f097b8e7139d58cb424575af 381 Pfam PF13439 Glycosyltransferase Family 4 13 177 4.3E-25 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 MC28_0769 02e989a5f097b8e7139d58cb424575af 381 Gene3D G3DSA:3.40.50.2000 22 369 8.1E-139 T 14-10-2018 MC28_0769 02e989a5f097b8e7139d58cb424575af 381 SUPERFAMILY SSF53756 8 375 8.79E-92 T 14-10-2018 MC28_0769 02e989a5f097b8e7139d58cb424575af 381 Gene3D G3DSA:3.40.50.2000 175 356 8.1E-139 T 14-10-2018 MC28_0769 02e989a5f097b8e7139d58cb424575af 381 Pfam PF00534 Glycosyl transferases group 1 188 350 2.3E-42 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_3334 4f53134ccfef85fa429069213aefb959 292 PIRSF PIRSF000103 1 291 1.8E-69 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 MC28_3334 4f53134ccfef85fa429069213aefb959 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 163 2.6E-53 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 MC28_3334 4f53134ccfef85fa429069213aefb959 292 Gene3D G3DSA:1.10.1040.10 167 291 1.5E-40 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_3334 4f53134ccfef85fa429069213aefb959 292 SUPERFAMILY SSF48179 167 289 5.21E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_3334 4f53134ccfef85fa429069213aefb959 292 Gene3D G3DSA:3.40.50.720 6 166 7.9E-51 T 14-10-2018 MC28_3334 4f53134ccfef85fa429069213aefb959 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 283 1.5E-35 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 MC28_3334 4f53134ccfef85fa429069213aefb959 292 SUPERFAMILY SSF51735 7 167 2.49E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 4.1E-39 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 4.1E-39 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 4.1E-39 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 4.1E-39 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 4.1E-39 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 148 8.0E-81 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 151 4.9E-48 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 Gene3D G3DSA:3.30.1360.80 1 157 6.6E-59 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 157 32.877 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 SUPERFAMILY SSF63411 4 152 1.74E-58 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MC28_4080 fe6d3d15bc78938f5e83751d3104569f 157 PIRSF PIRSF006160 1 157 7.8E-59 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 98 197 3.5E-37 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 SUPERFAMILY SSF46609 3 92 2.36E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 SUPERFAMILY SSF54719 90 202 8.51E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 Gene3D G3DSA:2.40.500.20 92 208 6.0E-49 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 PIRSF PIRSF000349 1 208 9.1E-78 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 PRINTS PR01703 Manganese superoxide dismutase signature 74 87 3.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 PRINTS PR01703 Manganese superoxide dismutase signature 127 135 3.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 3.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 3.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 3.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 Gene3D G3DSA:1.10.287.990 21 91 4.8E-31 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_4679 47102ea7c0621973d711ff619774ceb6 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 91 7.4E-29 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0357 53348b7fff515acdd5758231931bdc3e 1166 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1166 0.0 T 14-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 MC28_0357 53348b7fff515acdd5758231931bdc3e 1166 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1165 66.845 T 14-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 MC28_0357 53348b7fff515acdd5758231931bdc3e 1166 SUPERFAMILY SSF52540 304 749 1.49E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0357 53348b7fff515acdd5758231931bdc3e 1166 Pfam PF13361 UvrD-like helicase C-terminal domain 302 665 3.1E-8 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 MC28_0357 53348b7fff515acdd5758231931bdc3e 1166 Pfam PF12705 PD-(D/E)XK nuclease superfamily 790 1134 4.9E-55 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type MC28_0357 53348b7fff515acdd5758231931bdc3e 1166 Gene3D G3DSA:3.40.50.300 277 422 1.6E-29 T 14-10-2018 MC28_0357 53348b7fff515acdd5758231931bdc3e 1166 Gene3D G3DSA:3.40.50.300 553 696 2.4E-45 T 14-10-2018 MC28_0357 53348b7fff515acdd5758231931bdc3e 1166 Gene3D G3DSA:3.40.50.300 1 114 4.7E-31 T 14-10-2018 MC28_0357 53348b7fff515acdd5758231931bdc3e 1166 Gene3D G3DSA:3.40.50.300 132 273 4.6E-33 T 14-10-2018 MC28_5316 8c28221d69b3a516415ba6f7fe269b22 611 SUPERFAMILY SSF51695 348 574 3.14E-63 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_5316 8c28221d69b3a516415ba6f7fe269b22 611 Pfam PF10110 Membrane domain of glycerophosphoryl diester phosphodiesterase 1 338 2.2E-81 T 14-10-2018 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain MC28_5316 8c28221d69b3a516415ba6f7fe269b22 611 Gene3D G3DSA:3.20.20.190 340 578 5.9E-58 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_5316 8c28221d69b3a516415ba6f7fe269b22 611 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 354 569 1.1E-26 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 MC28_2032 51650314decee0b49575cf92161a3b0b 281 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 7 211 1.9E-16 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 MC28_2032 51650314decee0b49575cf92161a3b0b 281 PIRSF PIRSF000883 6 255 1.1E-63 T 14-10-2018 IPR011152 Phosphoesterase MJ0912 MC28_2032 51650314decee0b49575cf92161a3b0b 281 Gene3D G3DSA:3.60.21.10 2 263 3.3E-64 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_2032 51650314decee0b49575cf92161a3b0b 281 SUPERFAMILY SSF56300 4 246 1.9E-51 T 14-10-2018 MC28_G122 f1437f1f72a175d3fb484d5b812c2378 332 SUPERFAMILY SSF46955 71 123 2.01E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_G122 f1437f1f72a175d3fb484d5b812c2378 332 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 71 120 4.2E-8 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 MC28_G122 f1437f1f72a175d3fb484d5b812c2378 332 Gene3D G3DSA:1.10.1660.10 71 138 1.9E-8 T 14-10-2018 MC28_G122 f1437f1f72a175d3fb484d5b812c2378 332 Gene3D G3DSA:1.10.1660.10 12 70 6.7E-10 T 14-10-2018 MC28_G122 f1437f1f72a175d3fb484d5b812c2378 332 Pfam PF12728 Helix-turn-helix domain 71 120 2.8E-10 T 14-10-2018 MC28_3045 ef79007f6d4bac144de597a3adf5e820 255 Pfam PF01148 Cytidylyltransferase family 2 254 2.3E-67 T 14-10-2018 MC28_3045 ef79007f6d4bac144de597a3adf5e820 255 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 213 239 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 MC28_2077 461a8f3aac1e9da6eb41981c9fb6aabf 80 Pfam PF04226 Transglycosylase associated protein 31 76 7.6E-12 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 MC28_2089 26b20ef798604cf0b3276f2e4cc61eb9 273 PIRSF PIRSF036940 1 272 1.4E-125 T 14-10-2018 IPR011602 Type II pantothenate kinase, bacterial GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 MC28_2089 26b20ef798604cf0b3276f2e4cc61eb9 273 Pfam PF03630 Fumble 5 269 1.1E-35 T 14-10-2018 IPR004567 Type II pantothenate kinase GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: R-HSA-196783 MC28_2089 26b20ef798604cf0b3276f2e4cc61eb9 273 TIGRFAM TIGR00555 panK_eukar: pantothenate kinase 4 269 2.6E-89 T 14-10-2018 IPR004567 Type II pantothenate kinase GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: R-HSA-196783 MC28_2089 26b20ef798604cf0b3276f2e4cc61eb9 273 SUPERFAMILY SSF53067 5 271 3.62E-57 T 14-10-2018 MC28_2089 26b20ef798604cf0b3276f2e4cc61eb9 273 Gene3D G3DSA:3.30.420.40 5 268 8.3E-90 T 14-10-2018 MC28_2089 26b20ef798604cf0b3276f2e4cc61eb9 273 Hamap MF_01273 Type II pantothenate kinase [coaW]. 3 270 47.589 T 14-10-2018 IPR011602 Type II pantothenate kinase, bacterial GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 MC28_2089 26b20ef798604cf0b3276f2e4cc61eb9 273 Gene3D G3DSA:3.30.420.40 76 256 8.3E-90 T 14-10-2018 MC28_2312 b48aa1724a9f34cc9737cdcda5e5a15c 144 PIRSF PIRSF005859 1 144 1.4E-38 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 MC28_2312 b48aa1724a9f34cc9737cdcda5e5a15c 144 Pfam PF03073 TspO/MBR family 3 141 8.1E-30 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 MC28_2312 b48aa1724a9f34cc9737cdcda5e5a15c 144 Gene3D G3DSA:1.20.1260.100 1 144 2.2E-29 T 14-10-2018 IPR038330 TspO/MBR-related superfamily MC28_4409 e49336a306b5af726bccd014a29df106 122 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4409 e49336a306b5af726bccd014a29df106 122 Gene3D G3DSA:1.10.1660.10 1 121 1.1E-26 T 14-10-2018 MC28_4409 e49336a306b5af726bccd014a29df106 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.3E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4409 e49336a306b5af726bccd014a29df106 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.3E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4409 e49336a306b5af726bccd014a29df106 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 7.3E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4409 e49336a306b5af726bccd014a29df106 122 Pfam PF13411 MerR HTH family regulatory protein 2 68 1.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4409 e49336a306b5af726bccd014a29df106 122 SUPERFAMILY SSF46955 2 111 2.89E-22 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_4409 e49336a306b5af726bccd014a29df106 122 SMART SM00422 1 69 3.3E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0460 0b384e40c2f560b22503f8630317a369 333 SUPERFAMILY SSF52418 65 330 8.37E-89 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_0460 0b384e40c2f560b22503f8630317a369 333 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 2 321 6.7E-113 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 MC28_0460 0b384e40c2f560b22503f8630317a369 333 Gene3D G3DSA:1.20.970.10 1 59 8.6E-17 T 14-10-2018 MC28_0460 0b384e40c2f560b22503f8630317a369 333 Pfam PF00591 Glycosyl transferase family, a/b domain 66 315 3.9E-89 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_0460 0b384e40c2f560b22503f8630317a369 333 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 2 324 35.068 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 MC28_0460 0b384e40c2f560b22503f8630317a369 333 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 56 1.7E-12 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_0460 0b384e40c2f560b22503f8630317a369 333 Gene3D G3DSA:3.40.1030.10 62 330 2.0E-101 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_0460 0b384e40c2f560b22503f8630317a369 333 SUPERFAMILY SSF47648 2 59 2.35E-12 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_F111 f45e4eff49199e54c151a9a5a8d69f35 332 SUPERFAMILY SSF82549 11 331 1.54E-127 T 14-10-2018 MC28_F111 f45e4eff49199e54c151a9a5a8d69f35 332 Gene3D G3DSA:3.30.1180.20 185 330 9.2E-51 T 14-10-2018 MC28_F111 f45e4eff49199e54c151a9a5a8d69f35 332 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 329 8.8E-150 T 14-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 MC28_F111 f45e4eff49199e54c151a9a5a8d69f35 332 Pfam PF02733 Dak1 domain 18 326 5.3E-130 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_F111 f45e4eff49199e54c151a9a5a8d69f35 332 Gene3D G3DSA:3.40.50.10440 12 184 2.6E-72 T 14-10-2018 MC28_1049 21bf7926e84c3e6655902f9ba10849bf 378 Pfam PF04055 Radical SAM superfamily 17 163 1.8E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_1049 21bf7926e84c3e6655902f9ba10849bf 378 SUPERFAMILY SSF102114 10 340 1.31E-65 T 14-10-2018 MC28_1049 21bf7926e84c3e6655902f9ba10849bf 378 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 5 363 1.6E-161 T 14-10-2018 IPR027634 Radical SAM protein, BA_1875 family MC28_1049 21bf7926e84c3e6655902f9ba10849bf 378 Pfam PF13353 4Fe-4S single cluster domain 14 123 4.7E-7 T 14-10-2018 MC28_1049 21bf7926e84c3e6655902f9ba10849bf 378 Gene3D G3DSA:3.20.20.70 4 320 1.1E-46 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_1049 21bf7926e84c3e6655902f9ba10849bf 378 SMART SM00729 11 213 0.0033 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_1049 21bf7926e84c3e6655902f9ba10849bf 378 PIRSF PIRSF037420 3 376 5.1E-99 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E MC28_1049 21bf7926e84c3e6655902f9ba10849bf 378 Pfam PF13186 Iron-sulfur cluster-binding domain 278 332 1.3E-5 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain MC28_4075 afbb69401c7e0473b95fd3b4cba42dfc 159 PRINTS PR00502 NUDIX hydrolase family signature 62 77 2.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_4075 afbb69401c7e0473b95fd3b4cba42dfc 159 PRINTS PR00502 NUDIX hydrolase family signature 48 62 2.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_4075 afbb69401c7e0473b95fd3b4cba42dfc 159 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 157 3.1E-75 T 14-10-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 MC28_4075 afbb69401c7e0473b95fd3b4cba42dfc 159 Gene3D G3DSA:3.90.79.10 1 157 1.2E-46 T 14-10-2018 MC28_4075 afbb69401c7e0473b95fd3b4cba42dfc 159 Pfam PF00293 NUDIX domain 28 96 9.3E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_4075 afbb69401c7e0473b95fd3b4cba42dfc 159 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_4075 afbb69401c7e0473b95fd3b4cba42dfc 159 SUPERFAMILY SSF55811 27 109 5.15E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_G144 934628e7f7e5294fa43d4d722bd8d5a6 656 PIRSF PIRSF018968 1 655 4.4E-132 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_G144 934628e7f7e5294fa43d4d722bd8d5a6 656 Pfam PF02687 FtsX-like permease family 89 179 3.2E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 Pfam PF00106 short chain dehydrogenase 8 193 1.2E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 Gene3D G3DSA:3.40.50.720 1 264 1.5E-80 T 14-10-2018 MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 8.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 8.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 SUPERFAMILY SSF51735 6 259 8.51E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2521 1e6a6a4bc579cedcd69767cf556a98b0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0499 593acd2f69583d1183e2e698e1492f31 369 Pfam PF14657 Arm DNA-binding domain 12 52 6.3E-13 T 14-10-2018 IPR028259 AP2-like integrase, N-terminal domain MC28_0499 593acd2f69583d1183e2e698e1492f31 369 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 65 119 2.2E-14 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_0499 593acd2f69583d1183e2e698e1492f31 369 Gene3D G3DSA:1.10.150.130 58 171 1.4E-27 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_0499 593acd2f69583d1183e2e698e1492f31 369 Gene3D G3DSA:1.10.443.10 172 368 8.4E-55 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_0499 593acd2f69583d1183e2e698e1492f31 369 Pfam PF00589 Phage integrase family 175 353 1.2E-27 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_0499 593acd2f69583d1183e2e698e1492f31 369 SUPERFAMILY SSF56349 64 362 9.42E-70 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_3923 867f948d4e4d5f133a26f31f20869253 530 Gene3D G3DSA:3.30.300.310 423 527 5.2E-29 T 14-10-2018 MC28_3923 867f948d4e4d5f133a26f31f20869253 530 SUPERFAMILY SSF56801 26 526 8.5E-138 T 14-10-2018 MC28_3923 867f948d4e4d5f133a26f31f20869253 530 Gene3D G3DSA:3.40.50.12780 10 422 6.2E-110 T 14-10-2018 MC28_3923 867f948d4e4d5f133a26f31f20869253 530 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_3923 867f948d4e4d5f133a26f31f20869253 530 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 514 3.7E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_3923 867f948d4e4d5f133a26f31f20869253 530 Pfam PF00501 AMP-binding enzyme 27 426 1.4E-79 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_0666 17aba922db6675433f1945106edf01f2 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 5.8E-11 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_0666 17aba922db6675433f1945106edf01f2 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 5.8E-11 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_0666 17aba922db6675433f1945106edf01f2 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 298 317 5.8E-11 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_0666 17aba922db6675433f1945106edf01f2 452 Pfam PF00209 Sodium:neurotransmitter symporter family 6 123 1.4E-24 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_0666 17aba922db6675433f1945106edf01f2 452 Pfam PF00209 Sodium:neurotransmitter symporter family 149 447 2.2E-28 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_0666 17aba922db6675433f1945106edf01f2 452 SUPERFAMILY SSF161070 7 445 1.57E-129 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 MC28_1779 5b7dec86fe01048991c35f364a49a184 563 SUPERFAMILY SSF55486 32 558 1.95E-89 T 14-10-2018 MC28_1779 5b7dec86fe01048991c35f364a49a184 563 Gene3D G3DSA:1.10.1370.30 4 563 6.8E-156 T 14-10-2018 MC28_1779 5b7dec86fe01048991c35f364a49a184 563 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 13 561 5.2E-230 T 14-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related MC28_1779 5b7dec86fe01048991c35f364a49a184 563 Pfam PF01432 Peptidase family M3 163 549 4.5E-42 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 MC28_4473 30dd34ab586a3c63d799cc4305dcb2c6 518 ProSitePatterns PS01303 BCCT family of transporters signature. 327 336 - T 14-10-2018 IPR018093 BCCT transporter, conserved site MC28_4473 30dd34ab586a3c63d799cc4305dcb2c6 518 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 21 511 1.6E-191 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 MC28_4473 30dd34ab586a3c63d799cc4305dcb2c6 518 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 63 511 3.2E-161 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 MC28_3395 abd307d82364b799403b5f6438e65a52 332 Pfam PF00561 alpha/beta hydrolase fold 47 156 2.4E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3395 abd307d82364b799403b5f6438e65a52 332 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 125 139 7.3E-9 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MC28_3395 abd307d82364b799403b5f6438e65a52 332 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 49 57 7.3E-9 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MC28_3395 abd307d82364b799403b5f6438e65a52 332 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 77 88 7.3E-9 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MC28_3395 abd307d82364b799403b5f6438e65a52 332 SUPERFAMILY SSF53474 30 321 3.41E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3395 abd307d82364b799403b5f6438e65a52 332 Gene3D G3DSA:3.40.50.1820 23 324 6.3E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_E053 d5c43cc4b312b22711ae648f13795035 259 SUPERFAMILY SSF55676 20 245 2.75E-97 T 14-10-2018 IPR035918 Delta-endotoxin CytB-like superfamily MC28_E053 d5c43cc4b312b22711ae648f13795035 259 Pfam PF01338 Bacillus thuringiensis toxin 25 243 2.7E-98 T 14-10-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 MC28_E053 d5c43cc4b312b22711ae648f13795035 259 Gene3D G3DSA:3.40.198.10 19 259 1.9E-118 T 14-10-2018 IPR035918 Delta-endotoxin CytB-like superfamily MC28_E053 d5c43cc4b312b22711ae648f13795035 259 ProDom PD009844 CYTOLYTIC TOXIN DELTA-ENDOTOXIN SPORULATION PLASMID TYPE-1AA TOCIN 3D-STRUCTURE CRYET29 TYPE-1BA 27 245 6.0E-124 T 14-10-2018 IPR001615 Delta-endotoxin CytB GO:0005576|GO:0009405 MC28_4811 a8b7f44ad6c48ade403a9e0f8e205173 166 SUPERFAMILY SSF160369 5 160 1.22E-54 T 14-10-2018 MC28_4811 a8b7f44ad6c48ade403a9e0f8e205173 166 Gene3D G3DSA:3.30.70.1730 1 165 7.6E-43 T 14-10-2018 MC28_4811 a8b7f44ad6c48ade403a9e0f8e205173 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 26 143 0.002 T 14-10-2018 MC28_4811 a8b7f44ad6c48ade403a9e0f8e205173 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.24 T 14-10-2018 IPR022973 Ribosomal protein L10 MC28_4811 a8b7f44ad6c48ade403a9e0f8e205173 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4811 a8b7f44ad6c48ade403a9e0f8e205173 166 Pfam PF00466 Ribosomal protein L10 6 100 2.0E-29 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SUPERFAMILY SSF52075 552 667 5.49E-20 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SUPERFAMILY SSF52058 193 427 2.61E-40 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SUPERFAMILY SSF158911 35 150 5.76E-30 T 14-10-2018 IPR037250 NEAT domain superfamily MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00369 317 339 42.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00369 621 643 47.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00369 383 406 24.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00369 599 620 310.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 Gene3D G3DSA:3.80.10.10 549 659 4.7E-19 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SUPERFAMILY SSF81296 679 750 9.33E-9 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 Gene3D G3DSA:2.60.40.1850 29 152 1.1E-37 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00365 599 620 390.0 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00365 405 426 630.0 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00365 361 382 290.0 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00365 317 338 26.0 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00365 339 360 0.21 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00365 273 294 31.0 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00365 383 404 330.0 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00365 251 272 140.0 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00365 295 316 35.0 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SMART SM00725 33 160 4.3E-17 T 14-10-2018 IPR006635 NEAT domain MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 Gene3D G3DSA:2.60.40.1220 417 515 6.1E-15 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 Gene3D G3DSA:2.60.40.1220 660 751 5.4E-14 T 14-10-2018 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 SUPERFAMILY SSF81296 440 514 5.6E-10 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 Pfam PF05031 Iron Transport-associated domain 33 150 1.0E-30 T 14-10-2018 IPR006635 NEAT domain MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 Pfam PF12799 Leucine Rich repeats (2 copies) 277 314 2.3E-6 T 14-10-2018 IPR025875 Leucine rich repeat 4 MC28_5275 29343ab6a30a2b8a71f26f8902ffc1fe 887 Gene3D G3DSA:3.80.10.10 161 375 1.5E-45 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily MC28_3576 43e99959e29b401a759090b38180c713 289 SMART SM00518 1 277 1.1E-112 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 MC28_3576 43e99959e29b401a759090b38180c713 289 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 205 221 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 MC28_3576 43e99959e29b401a759090b38180c713 289 Pfam PF01261 Xylose isomerase-like TIM barrel 13 229 1.0E-34 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain MC28_3576 43e99959e29b401a759090b38180c713 289 SUPERFAMILY SSF51658 2 286 5.24E-95 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily MC28_3576 43e99959e29b401a759090b38180c713 289 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 167 174 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 MC28_3576 43e99959e29b401a759090b38180c713 289 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 60 68 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 MC28_3576 43e99959e29b401a759090b38180c713 289 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 1 274 4.9E-94 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 MC28_3576 43e99959e29b401a759090b38180c713 289 Hamap MF_00152 Probable endonuclease 4 [nfo]. 5 277 37.341 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 MC28_3576 43e99959e29b401a759090b38180c713 289 Gene3D G3DSA:3.20.20.150 1 289 1.8E-97 T 14-10-2018 MC28_1530 547112e587e12c0161eefcdc9928e624 350 Gene3D G3DSA:3.40.80.10 28 199 8.1E-53 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_1530 547112e587e12c0161eefcdc9928e624 350 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 48 167 1.0E-13 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_1530 547112e587e12c0161eefcdc9928e624 350 SMART SM00644 34 168 1.4E-23 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_1530 547112e587e12c0161eefcdc9928e624 350 Gene3D G3DSA:2.30.30.40 218 269 2.2E-7 T 14-10-2018 MC28_1530 547112e587e12c0161eefcdc9928e624 350 SUPERFAMILY SSF55846 36 186 3.45E-32 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_3544 3e952ac3f2023e59fbbfb83911fe9404 52 Pfam PF13110 Protein of unknown function (DUF3966) 1 50 2.0E-38 T 14-10-2018 IPR025084 Protein of unknown function DUF3966 MC28_3603 ac43d7d09aadfbe773203dc658ecbc92 312 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 2.0E-95 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 MC28_3603 ac43d7d09aadfbe773203dc658ecbc92 312 PIRSF PIRSF000401 1 312 1.5E-118 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 MC28_3603 ac43d7d09aadfbe773203dc658ecbc92 312 Gene3D G3DSA:3.40.50.150 116 311 2.5E-62 T 14-10-2018 MC28_3603 ac43d7d09aadfbe773203dc658ecbc92 312 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 37.137 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 MC28_3603 ac43d7d09aadfbe773203dc658ecbc92 312 SUPERFAMILY SSF53335 62 309 1.05E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3603 ac43d7d09aadfbe773203dc658ecbc92 312 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 310 1.2E-105 T 14-10-2018 MC28_0277 78a3eb46f6c6224cf0804dad6437d178 115 Gene3D G3DSA:1.10.3750.10 3 115 3.1E-34 T 14-10-2018 IPR035945 YhaI-like superfamily MC28_0277 78a3eb46f6c6224cf0804dad6437d178 115 Pfam PF08963 Protein of unknown function (DUF1878) 6 111 5.3E-42 T 14-10-2018 IPR015058 Protein of unknown function DUF1878 MC28_0277 78a3eb46f6c6224cf0804dad6437d178 115 SUPERFAMILY SSF109915 5 112 1.31E-46 T 14-10-2018 IPR035945 YhaI-like superfamily MC28_0277 78a3eb46f6c6224cf0804dad6437d178 115 ProDom PD073069 YHAI 3D-STRUCTURE 15 104 3.0E-43 T 14-10-2018 IPR015058 Protein of unknown function DUF1878 MC28_D122 223fd34cd63eca2d2959c887488ae902 104 Pfam PF17332 Uncharacterized protein pXO2-11 7 93 4.6E-10 T 14-10-2018 IPR020275 Uncharacterised protein family, plasmid pXO2-11 MC28_D122 223fd34cd63eca2d2959c887488ae902 104 ProDom PD286107 PLASMID MEMBRANE PXO2-11/BXB0010/GBAA_PXO2_0010 TRANSMEMBRANE 3 98 3.0E-44 T 14-10-2018 IPR020275 Uncharacterised protein family, plasmid pXO2-11 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 Pfam PF00196 Bacterial regulatory proteins, luxR family 531 585 5.0E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 561 573 9.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 531 545 9.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 545 561 9.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 SUPERFAMILY SSF52172 380 543 1.71E-31 T 14-10-2018 IPR011006 CheY-like superfamily MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 SUPERFAMILY SSF46894 523 591 2.24E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 Pfam PF00072 Response regulator receiver domain 383 493 5.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 Gene3D G3DSA:3.40.50.12740 380 591 6.7E-61 T 14-10-2018 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 SMART SM00421 528 585 4.7E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 Gene3D G3DSA:3.30.565.10 245 376 6.5E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 Pfam PF07730 Histidine kinase 181 243 7.6E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 SMART SM00448 380 493 4.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 PIRSF PIRSF037435 1 592 0.0 T 14-10-2018 IPR017206 Signal transduction histidine kinase, hybrid-type, BC3207, predicted MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 SUPERFAMILY SSF55874 249 370 3.54E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1108 408c8945c1cc7b32737d6caf01871ff0 592 ProSitePatterns PS00622 LuxR-type HTH domain signature. 545 572 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0366 09e28037de77970dd60e40c7da552e20 64 Gene3D G3DSA:1.20.58.990 4 64 2.6E-21 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_0366 09e28037de77970dd60e40c7da552e20 64 SUPERFAMILY SSF140500 5 57 1.15E-16 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_0366 09e28037de77970dd60e40c7da552e20 64 Pfam PF09388 Spo0E like sporulation regulatory protein 8 44 4.6E-15 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 MC28_3666 a7c7786aac95c9230db9d60e1aba5a9c 212 Pfam PF08241 Methyltransferase domain 50 143 1.5E-14 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_3666 a7c7786aac95c9230db9d60e1aba5a9c 212 Hamap MF_02100 Uncharacterized methyltransferase . 2 212 45.552 T 14-10-2018 IPR023553 Uncharacterised methyltransferase, YrrT GO:0008168 MC28_3666 a7c7786aac95c9230db9d60e1aba5a9c 212 Gene3D G3DSA:3.40.50.150 24 212 1.4E-55 T 14-10-2018 MC28_3666 a7c7786aac95c9230db9d60e1aba5a9c 212 SUPERFAMILY SSF53335 8 199 3.67E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3230 992a7a2c70476dce1032e121bfebd5a1 307 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 82 104 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site MC28_3230 992a7a2c70476dce1032e121bfebd5a1 307 Pfam PF01040 UbiA prenyltransferase family 41 290 4.6E-55 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 MC28_3230 992a7a2c70476dce1032e121bfebd5a1 307 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 22 306 18.015 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 MC28_3230 992a7a2c70476dce1032e121bfebd5a1 307 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 25 303 1.8E-91 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 MC28_3230 992a7a2c70476dce1032e121bfebd5a1 307 Gene3D G3DSA:1.10.357.140 34 189 5.2E-17 T 14-10-2018 MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 Gene3D G3DSA:3.30.450.20 129 229 1.8E-12 T 14-10-2018 MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 Gene3D G3DSA:1.10.10.60 637 696 1.1E-5 T 14-10-2018 MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 SUPERFAMILY SSF55785 238 346 6.46E-6 T 14-10-2018 IPR035965 PAS domain superfamily MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 SMART SM00382 408 552 3.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 SUPERFAMILY SSF55785 120 224 8.2E-10 T 14-10-2018 IPR035965 PAS domain superfamily MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 412 425 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 SUPERFAMILY SSF46689 601 694 5.38E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 Gene3D G3DSA:3.40.50.300 374 559 4.9E-65 T 14-10-2018 MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 601 610 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 Pfam PF00158 Sigma-54 interaction domain 389 556 5.1E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 Pfam PF13426 PAS domain 137 227 4.5E-8 T 14-10-2018 IPR000014 PAS domain MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 Pfam PF13426 PAS domain 258 353 1.0E-5 T 14-10-2018 IPR000014 PAS domain MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 Gene3D G3DSA:3.30.450.20 230 373 8.2E-12 T 14-10-2018 MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 SMART SM00091 127 193 0.0098 T 14-10-2018 IPR000014 PAS domain MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 SMART SM00091 245 313 29.0 T 14-10-2018 IPR000014 PAS domain MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 Gene3D G3DSA:1.10.8.60 560 626 2.0E-23 T 14-10-2018 MC28_0589 8cfba49d31e6e191510dd88ad3405f54 709 SUPERFAMILY SSF52540 388 630 6.81E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3444 7e88cacde0a71602716ad7ae703d6fde 225 Gene3D G3DSA:1.10.3720.10 7 225 5.8E-57 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3444 7e88cacde0a71602716ad7ae703d6fde 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 2.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_3444 7e88cacde0a71602716ad7ae703d6fde 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 116 2.3E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 MC28_3444 7e88cacde0a71602716ad7ae703d6fde 225 SUPERFAMILY SSF161098 19 207 2.22E-44 T 14-10-2018 IPR035906 MetI-like superfamily MC28_2567 3097cfd029bd3676d5edb7fa939fb531 187 SUPERFAMILY SSF55729 6 179 1.77E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2567 3097cfd029bd3676d5edb7fa939fb531 187 Pfam PF13302 Acetyltransferase (GNAT) domain 13 157 3.2E-19 T 14-10-2018 IPR000182 GNAT domain MC28_2567 3097cfd029bd3676d5edb7fa939fb531 187 Gene3D G3DSA:3.40.630.30 3 180 8.2E-35 T 14-10-2018 MC28_5019 728f71eef51b3643a20db974ae2dd59c 229 Pfam PF01884 PcrB family 2 226 3.6E-87 T 14-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 MC28_5019 728f71eef51b3643a20db974ae2dd59c 229 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 226 28.079 T 14-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 MC28_5019 728f71eef51b3643a20db974ae2dd59c 229 Gene3D G3DSA:3.20.20.390 1 229 1.0E-97 T 14-10-2018 IPR038597 GGGP/HepGP synthase superfamily MC28_5019 728f71eef51b3643a20db974ae2dd59c 229 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 9 223 2.5E-75 T 14-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 MC28_5019 728f71eef51b3643a20db974ae2dd59c 229 SUPERFAMILY SSF51395 6 223 2.56E-55 T 14-10-2018 MC28_3804 c88f0193469729ac655a263bf9100cf0 577 Pfam PF13193 AMP-binding enzyme C-terminal domain 482 557 1.6E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_3804 c88f0193469729ac655a263bf9100cf0 577 Pfam PF00501 AMP-binding enzyme 45 472 7.4E-119 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_3804 c88f0193469729ac655a263bf9100cf0 577 SUPERFAMILY SSF56801 30 567 2.22E-162 T 14-10-2018 MC28_3804 c88f0193469729ac655a263bf9100cf0 577 Gene3D G3DSA:3.30.300.310 469 573 2.4E-32 T 14-10-2018 MC28_3804 c88f0193469729ac655a263bf9100cf0 577 ProSitePatterns PS00455 Putative AMP-binding domain signature. 225 236 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_3804 c88f0193469729ac655a263bf9100cf0 577 Gene3D G3DSA:3.40.50.12780 28 463 1.1E-133 T 14-10-2018 MC28_3775 14000007493d5e260062376b5390e409 443 SUPERFAMILY SSF103473 9 431 2.62E-58 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_3775 14000007493d5e260062376b5390e409 443 PRINTS PR01036 Tetracycline resistance protein TetB signature 75 97 3.5E-22 T 14-10-2018 MC28_3775 14000007493d5e260062376b5390e409 443 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 3.5E-22 T 14-10-2018 MC28_3775 14000007493d5e260062376b5390e409 443 PRINTS PR01036 Tetracycline resistance protein TetB signature 291 315 3.5E-22 T 14-10-2018 MC28_3775 14000007493d5e260062376b5390e409 443 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 3.5E-22 T 14-10-2018 MC28_3775 14000007493d5e260062376b5390e409 443 PRINTS PR01036 Tetracycline resistance protein TetB signature 161 185 3.5E-22 T 14-10-2018 MC28_3775 14000007493d5e260062376b5390e409 443 Pfam PF07690 Major Facilitator Superfamily 16 398 1.5E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_3775 14000007493d5e260062376b5390e409 443 Gene3D G3DSA:1.20.1250.20 249 438 7.3E-19 T 14-10-2018 MC28_3775 14000007493d5e260062376b5390e409 443 Gene3D G3DSA:1.20.1720.10 12 248 3.9E-41 T 14-10-2018 MC28_3379 a757c2b42b3f50048a1ec89781c187fe 273 PIRSF PIRSF000477 1 271 7.6E-123 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 MC28_3379 a757c2b42b3f50048a1ec89781c187fe 273 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 75 116 - T 14-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 MC28_3379 a757c2b42b3f50048a1ec89781c187fe 273 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 22 268 3.2E-121 T 14-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 MC28_3379 a757c2b42b3f50048a1ec89781c187fe 273 SUPERFAMILY SSF53167 4 271 1.44E-102 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 MC28_3379 a757c2b42b3f50048a1ec89781c187fe 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 22 269 3.0E-113 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 MC28_3379 a757c2b42b3f50048a1ec89781c187fe 273 Gene3D G3DSA:3.40.50.1580 1 272 1.8E-119 T 14-10-2018 MC28_3379 a757c2b42b3f50048a1ec89781c187fe 273 Pfam PF01048 Phosphorylase superfamily 23 268 7.2E-61 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 MC28_G306 ca268e5224e3f6b9ed73acdd1aeee7f1 419 Gene3D G3DSA:1.20.1250.20 31 417 5.1E-39 T 14-10-2018 MC28_G306 ca268e5224e3f6b9ed73acdd1aeee7f1 419 Pfam PF07690 Major Facilitator Superfamily 41 217 4.2E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_G306 ca268e5224e3f6b9ed73acdd1aeee7f1 419 Pfam PF07690 Major Facilitator Superfamily 246 412 2.3E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_G306 ca268e5224e3f6b9ed73acdd1aeee7f1 419 SUPERFAMILY SSF103473 33 415 2.62E-48 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_3328 2b94bc8dd420db641eb94ea9128e7449 414 Gene3D G3DSA:3.30.70.150 1 121 1.8E-30 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 MC28_3328 2b94bc8dd420db641eb94ea9128e7449 414 SUPERFAMILY SSF51649 121 411 3.27E-79 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 MC28_3328 2b94bc8dd420db641eb94ea9128e7449 414 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 4 101 2.8E-4 T 14-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 MC28_3328 2b94bc8dd420db641eb94ea9128e7449 414 Hamap MF_01679 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [mtnW]. 2 406 62.091 T 14-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 MC28_3328 2b94bc8dd420db641eb94ea9128e7449 414 SUPERFAMILY SSF54966 2 121 1.2E-29 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 MC28_3328 2b94bc8dd420db641eb94ea9128e7449 414 TIGRFAM TIGR03332 salvage_mtnW: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 2 406 1.5E-234 T 14-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 MC28_3328 2b94bc8dd420db641eb94ea9128e7449 414 Gene3D G3DSA:3.20.20.110 122 414 2.4E-100 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 MC28_3328 2b94bc8dd420db641eb94ea9128e7449 414 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 127 405 4.2E-35 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 Gene3D G3DSA:3.30.499.10 318 462 6.0E-50 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 PRINTS PR00415 Aconitase family signature 194 207 4.9E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 PRINTS PR00415 Aconitase family signature 118 131 4.9E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 PRINTS PR00415 Aconitase family signature 132 147 4.9E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 PRINTS PR00415 Aconitase family signature 333 344 4.9E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 PRINTS PR00415 Aconitase family signature 208 221 4.9E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 PRINTS PR00415 Aconitase family signature 283 297 4.9E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 PRINTS PR00415 Aconitase family signature 107 115 4.9E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 PRINTS PR00415 Aconitase family signature 389 402 4.9E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 PRINTS PR00415 Aconitase family signature 81 94 4.9E-46 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 456 57.128 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 Pfam PF00330 Aconitase family (aconitate hydratase) 7 447 8.3E-154 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 454 2.1E-214 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 SUPERFAMILY SSF53732 2 454 1.57E-162 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 ProSitePatterns PS00450 Aconitase family signature 1. 329 345 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 Gene3D G3DSA:3.30.499.20 2 283 5.0E-100 T 14-10-2018 MC28_0639 3c5e3d3157e2bd515853eac8ff3f99e1 464 ProSitePatterns PS01244 Aconitase family signature 2. 389 402 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 MC28_4933 8ad877a22314b8c8f694a80c891b6fea 424 Gene3D G3DSA:1.20.1250.20 9 408 2.0E-57 T 14-10-2018 MC28_4933 8ad877a22314b8c8f694a80c891b6fea 424 SUPERFAMILY SSF103473 9 416 3.79E-61 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4933 8ad877a22314b8c8f694a80c891b6fea 424 Pfam PF07690 Major Facilitator Superfamily 19 364 2.8E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_4933 8ad877a22314b8c8f694a80c891b6fea 424 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_1039 004df6247be341a24fd74d551cddd005 287 Pfam PF00583 Acetyltransferase (GNAT) family 181 277 1.8E-5 T 14-10-2018 IPR000182 GNAT domain MC28_1039 004df6247be341a24fd74d551cddd005 287 Gene3D G3DSA:1.10.1780.10 8 139 1.1E-5 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 MC28_1039 004df6247be341a24fd74d551cddd005 287 SUPERFAMILY SSF55729 163 275 1.56E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1039 004df6247be341a24fd74d551cddd005 287 SUPERFAMILY SSF81923 9 117 2.35E-7 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 MC28_1039 004df6247be341a24fd74d551cddd005 287 Gene3D G3DSA:3.40.630.30 156 276 1.4E-10 T 14-10-2018 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 PIRSF PIRSF039102 48 310 1.5E-99 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 PIRSF PIRSF039102 5 56 4.4E-12 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 303 35.327 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 68 79 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 Pfam PF07478 D-ala D-ala ligase C-terminus 111 300 7.2E-51 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 SMART SM01209 100 270 0.0026 T 14-10-2018 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 246 273 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 Gene3D G3DSA:3.30.470.20 101 296 2.0E-74 T 14-10-2018 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 302 1.7E-87 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 Pfam PF01820 D-ala D-ala ligase N-terminus 9 91 8.4E-22 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 Gene3D G3DSA:3.30.1490.20 116 182 2.0E-74 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 Gene3D G3DSA:3.40.50.20 5 89 7.8E-33 T 14-10-2018 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 SUPERFAMILY SSF56059 101 301 1.25E-47 T 14-10-2018 MC28_1808 893ad0a9e839d5dc0a09bc1c3d82b564 311 SUPERFAMILY SSF52440 7 101 1.44E-28 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_3272 f969f0835b068d3433964f02551b1af3 147 Gene3D G3DSA:3.10.580.10 1 147 9.9E-64 T 14-10-2018 MC28_3272 f969f0835b068d3433964f02551b1af3 147 SUPERFAMILY SSF54631 12 140 9.32E-29 T 14-10-2018 MC28_3272 f969f0835b068d3433964f02551b1af3 147 Pfam PF00571 CBS domain 86 139 4.9E-6 T 14-10-2018 IPR000644 CBS domain MC28_0679 8e32fdb7ee8a8aa4ce7248cf89825ee5 258 Gene3D G3DSA:3.40.50.150 3 212 3.8E-41 T 14-10-2018 MC28_0679 8e32fdb7ee8a8aa4ce7248cf89825ee5 258 SUPERFAMILY SSF53335 22 187 4.91E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0679 8e32fdb7ee8a8aa4ce7248cf89825ee5 258 Pfam PF08241 Methyltransferase domain 40 134 1.9E-27 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_2753 0ba962cd3fa58762f758ed7f9054afd3 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 191 1.4E-62 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MC28_2753 0ba962cd3fa58762f758ed7f9054afd3 198 SMART SM01207 9 184 2.6E-81 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MC28_2753 0ba962cd3fa58762f758ed7f9054afd3 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 183 1.2E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MC28_2753 0ba962cd3fa58762f758ed7f9054afd3 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 192 20.162 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MC28_C089 321d3f4c10985584cd13fa0960d3e195 190 Pfam PF00589 Phage integrase family 30 176 1.4E-23 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_C089 321d3f4c10985584cd13fa0960d3e195 190 Gene3D G3DSA:1.10.443.10 11 189 2.7E-30 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_C089 321d3f4c10985584cd13fa0960d3e195 190 SUPERFAMILY SSF56349 13 187 2.44E-35 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 SUPERFAMILY SSF52172 1 134 3.56E-32 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 SMART SM00448 2 115 1.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.4E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.4E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.4E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 SMART SM00421 146 203 2.8E-29 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 Pfam PF00072 Response regulator receiver domain 4 115 1.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 SUPERFAMILY SSF46894 138 208 1.46E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 4.3E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0676 2b57b26b7a4ac84ca450557014e11e37 210 Gene3D G3DSA:3.40.50.12740 2 209 1.0E-75 T 14-10-2018 MC28_1841 e4f74bc8b1e4c0f27d1262b2dbb1a234 392 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 8 391 2.6E-92 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 MC28_1841 e4f74bc8b1e4c0f27d1262b2dbb1a234 392 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 272 370 7.5E-15 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 MC28_1841 e4f74bc8b1e4c0f27d1262b2dbb1a234 392 Gene3D G3DSA:3.40.50.2000 7 386 4.6E-99 T 14-10-2018 MC28_1841 e4f74bc8b1e4c0f27d1262b2dbb1a234 392 Gene3D G3DSA:3.40.50.2000 212 375 4.6E-99 T 14-10-2018 MC28_1841 e4f74bc8b1e4c0f27d1262b2dbb1a234 392 SUPERFAMILY SSF53756 3 389 1.45E-70 T 14-10-2018 MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 SUPERFAMILY SSF69360 41 107 8.04E-18 T 14-10-2018 MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 86 100 0.013 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 313 331 4.6E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 259 271 0.25 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 110 119 0.25 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 63 78 5.2E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 206 224 3.0E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 295 307 0.93 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 273 291 0.0027 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 186 204 2.0E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 161 184 0.1 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Pfam PF01473 Putative cell wall binding repeat 123 139 1.3E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Gene3D G3DSA:2.10.270.10 16 108 3.8E-19 T 14-10-2018 MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Gene3D G3DSA:2.10.270.10 109 170 7.5E-21 T 14-10-2018 MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Gene3D G3DSA:2.10.270.10 171 232 7.9E-20 T 14-10-2018 MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Gene3D G3DSA:2.10.270.10 233 311 2.4E-19 T 14-10-2018 MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 Gene3D G3DSA:2.10.270.10 312 352 2.4E-12 T 14-10-2018 MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 SUPERFAMILY SSF69360 109 235 4.32E-40 T 14-10-2018 MC28_0111 0a43916b9bfbe10d147228822a7032e8 352 SUPERFAMILY SSF69360 233 351 3.38E-34 T 14-10-2018 MC28_5195 39789f13ce2737e6158d6f7a2ca6fc65 252 SUPERFAMILY SSF52096 31 198 4.75E-42 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_5195 39789f13ce2737e6158d6f7a2ca6fc65 252 Gene3D G3DSA:3.90.226.10 26 213 9.8E-48 T 14-10-2018 MC28_5195 39789f13ce2737e6158d6f7a2ca6fc65 252 PRINTS PR00127 Clp protease catalytic subunit P signature 67 87 1.9E-6 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_5195 39789f13ce2737e6158d6f7a2ca6fc65 252 PRINTS PR00127 Clp protease catalytic subunit P signature 174 193 1.9E-6 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_5195 39789f13ce2737e6158d6f7a2ca6fc65 252 Pfam PF00574 Clp protease 63 193 9.1E-28 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 SUPERFAMILY SSF52540 31 222 1.38E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 Gene3D G3DSA:3.40.50.300 13 177 1.6E-108 T 14-10-2018 MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 SMART SM00382 37 185 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 Gene3D G3DSA:1.10.8.60 8 238 1.6E-108 T 14-10-2018 MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 7.1E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 7.1E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 SUPERFAMILY SSF48019 244 360 1.28E-27 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 Pfam PF13177 DNA polymerase III, delta subunit 20 178 9.6E-47 T 14-10-2018 MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 360 7.4E-13 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 1.6E-147 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 MC28_4738 488cc6fdef484737715c5c47d89ac6f1 562 Gene3D G3DSA:1.20.272.10 242 363 4.3E-9 T 14-10-2018 MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 SMART SM00382 38 150 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 Pfam PF16193 AAA C-terminal domain 172 252 1.2E-24 T 14-10-2018 IPR032423 AAA C-terminal domain MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 Gene3D G3DSA:1.20.272.10 228 331 1.0E-40 T 14-10-2018 MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 Gene3D G3DSA:1.10.3710.10 332 427 6.4E-26 T 14-10-2018 MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 Pfam PF12002 MgsA AAA+ ATPase C terminal 253 418 3.7E-66 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 SUPERFAMILY SSF48019 238 420 6.23E-71 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 144 6.2E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 SUPERFAMILY SSF52540 3 228 5.1E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 Gene3D G3DSA:3.40.50.300 1 149 2.6E-40 T 14-10-2018 MC28_3690 5e83e32f15e07f179fceed1af38fa76f 428 Gene3D G3DSA:1.10.8.60 150 225 3.2E-17 T 14-10-2018 MC28_0372 7d39f053a02cfb45929469921c091f8e 618 SUPERFAMILY SSF56235 3 229 3.94E-66 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_0372 7d39f053a02cfb45929469921c091f8e 618 PIRSF PIRSF001589 4 618 1.5E-139 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 MC28_0372 7d39f053a02cfb45929469921c091f8e 618 Pfam PF00733 Asparagine synthase 246 585 2.0E-92 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 MC28_0372 7d39f053a02cfb45929469921c091f8e 618 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 5 537 2.4E-166 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 MC28_0372 7d39f053a02cfb45929469921c091f8e 618 Pfam PF13537 Glutamine amidotransferase domain 51 172 1.2E-45 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain MC28_0372 7d39f053a02cfb45929469921c091f8e 618 SUPERFAMILY SSF52402 235 578 2.88E-71 T 14-10-2018 MC28_0372 7d39f053a02cfb45929469921c091f8e 618 Gene3D G3DSA:3.60.20.10 5 187 3.3E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_4397 4ac0dd79f7610f1d5aa6a02659049ede 309 Gene3D G3DSA:3.40.1390.20 3 129 2.6E-44 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily MC28_4397 4ac0dd79f7610f1d5aa6a02659049ede 309 Pfam PF02603 HPr Serine kinase N terminus 4 127 1.1E-41 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 MC28_4397 4ac0dd79f7610f1d5aa6a02659049ede 309 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 42.73 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 MC28_4397 4ac0dd79f7610f1d5aa6a02659049ede 309 Gene3D G3DSA:3.40.50.300 130 309 5.4E-76 T 14-10-2018 MC28_4397 4ac0dd79f7610f1d5aa6a02659049ede 309 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 302 1.5E-120 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 MC28_4397 4ac0dd79f7610f1d5aa6a02659049ede 309 SUPERFAMILY SSF53795 132 298 3.02E-42 T 14-10-2018 MC28_4397 4ac0dd79f7610f1d5aa6a02659049ede 309 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 6.1E-78 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 MC28_4397 4ac0dd79f7610f1d5aa6a02659049ede 309 SUPERFAMILY SSF75138 1 131 1.96E-41 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily MC28_0191 0593ff07e18d6508ed9f81f640dd7384 491 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 24 443 2.1E-100 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 MC28_0191 0593ff07e18d6508ed9f81f640dd7384 491 Gene3D G3DSA:1.20.1250.20 270 482 1.5E-20 T 14-10-2018 MC28_0191 0593ff07e18d6508ed9f81f640dd7384 491 Gene3D G3DSA:1.20.1720.10 23 256 3.8E-33 T 14-10-2018 MC28_0191 0593ff07e18d6508ed9f81f640dd7384 491 Pfam PF07690 Major Facilitator Superfamily 27 417 2.9E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0191 0593ff07e18d6508ed9f81f640dd7384 491 PRINTS PR01036 Tetracycline resistance protein TetB signature 147 171 7.6E-6 T 14-10-2018 MC28_0191 0593ff07e18d6508ed9f81f640dd7384 491 PRINTS PR01036 Tetracycline resistance protein TetB signature 117 137 7.6E-6 T 14-10-2018 MC28_0191 0593ff07e18d6508ed9f81f640dd7384 491 PRINTS PR01036 Tetracycline resistance protein TetB signature 311 335 7.6E-6 T 14-10-2018 MC28_0191 0593ff07e18d6508ed9f81f640dd7384 491 SUPERFAMILY SSF103473 16 482 6.67E-61 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4153 673ed696fc05c6dc9baeb3184b688088 802 Pfam PF00343 Carbohydrate phosphorylase 93 795 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 MC28_4153 673ed696fc05c6dc9baeb3184b688088 802 SUPERFAMILY SSF53756 4 795 9.42E-302 T 14-10-2018 MC28_4153 673ed696fc05c6dc9baeb3184b688088 802 Gene3D G3DSA:3.40.50.2000 15 795 0.0 T 14-10-2018 MC28_4153 673ed696fc05c6dc9baeb3184b688088 802 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 795 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 MC28_4153 673ed696fc05c6dc9baeb3184b688088 802 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 639 651 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 MC28_4153 673ed696fc05c6dc9baeb3184b688088 802 Gene3D G3DSA:3.40.50.2000 461 788 0.0 T 14-10-2018 MC28_4153 673ed696fc05c6dc9baeb3184b688088 802 PIRSF PIRSF000460 3 801 2.4E-233 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 Gene3D G3DSA:3.40.50.920 546 673 2.3E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 TIGRFAM TIGR00232 tktlase_bact: transketolase 18 672 3.4E-274 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 SUPERFAMILY SSF52518 354 534 1.28E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 ProSitePatterns PS00801 Transketolase signature 1. 23 43 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 ProSitePatterns PS00802 Transketolase signature 2. 475 491 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 Gene3D G3DSA:3.40.50.970 2 343 8.3E-126 T 14-10-2018 MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 SUPERFAMILY SSF52922 540 672 7.85E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 SMART SM00861 362 533 3.4E-70 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 345 3.5E-146 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 Gene3D G3DSA:3.40.50.970 344 545 4.9E-76 T 14-10-2018 MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 SUPERFAMILY SSF52518 13 333 5.66E-114 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 Pfam PF02780 Transketolase, C-terminal domain 555 663 8.6E-13 T 14-10-2018 IPR033248 Transketolase, C-terminal domain MC28_2514 1dda0f55f109647fa58d63de9a6f07cf 673 Pfam PF02779 Transketolase, pyrimidine binding domain 361 532 7.1E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_0554 805476d53acb496299713b4c8f2b49e1 267 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 204 2.3E-17 T 14-10-2018 MC28_0554 805476d53acb496299713b4c8f2b49e1 267 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 5 257 5.5E-116 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 MC28_0554 805476d53acb496299713b4c8f2b49e1 267 Gene3D G3DSA:3.40.50.1000 6 256 8.0E-115 T 14-10-2018 IPR023214 HAD superfamily MC28_0554 805476d53acb496299713b4c8f2b49e1 267 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 204 3.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_0554 805476d53acb496299713b4c8f2b49e1 267 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 198 1.3E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_0554 805476d53acb496299713b4c8f2b49e1 267 Gene3D G3DSA:1.10.150.240 24 101 8.0E-115 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_0554 805476d53acb496299713b4c8f2b49e1 267 SUPERFAMILY SSF56784 5 258 9.17E-65 T 14-10-2018 IPR036412 HAD-like superfamily MC28_0554 805476d53acb496299713b4c8f2b49e1 267 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 267 131.949 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 MC28_1575 00e9bef0784f91a95deb0636fd74d93c 399 Pfam PF00425 chorismate binding enzyme 122 381 1.0E-81 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal MC28_1575 00e9bef0784f91a95deb0636fd74d93c 399 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 101 389 1.0E-92 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 MC28_1575 00e9bef0784f91a95deb0636fd74d93c 399 SUPERFAMILY SSF56322 17 392 3.92E-98 T 14-10-2018 IPR005801 ADC synthase GO:0009058 MC28_1575 00e9bef0784f91a95deb0636fd74d93c 399 Gene3D G3DSA:3.60.120.10 1 399 1.4E-158 T 14-10-2018 IPR005801 ADC synthase GO:0009058 MC28_2944 fdc8096b0fa78738e558992788a68ddf 319 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 12 317 1.8E-101 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 MC28_2944 fdc8096b0fa78738e558992788a68ddf 319 Gene3D G3DSA:3.20.20.140 11 318 7.7E-107 T 14-10-2018 MC28_2944 fdc8096b0fa78738e558992788a68ddf 319 SUPERFAMILY SSF51556 12 316 3.57E-75 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 Gene3D G3DSA:2.60.40.10 553 670 3.0E-40 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 217 234 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 34 50 3.5E-40 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 116 132 3.5E-40 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 217 235 3.5E-40 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 70 89 3.5E-40 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 147 163 3.5E-40 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 Gene3D G3DSA:3.20.20.300 1 292 1.9E-108 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 SUPERFAMILY SSF52279 316 553 4.18E-54 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 SUPERFAMILY SSF51445 4 315 2.21E-91 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 Pfam PF14310 Fibronectin type III-like domain 587 657 1.9E-26 T 14-10-2018 IPR026891 Fibronectin type III-like domain MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 Gene3D G3DSA:3.40.50.1700 302 551 4.2E-78 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 33 283 1.5E-49 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 316 550 3.3E-54 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 MC28_2176 55a6adc6ade7d3d5066cef12a487c0ad 763 SMART SM01217 587 657 1.4E-33 T 14-10-2018 IPR026891 Fibronectin type III-like domain MC28_F223 5e996942cee547bd2326ee0e708b29d5 254 Gene3D G3DSA:3.40.50.300 4 250 2.1E-66 T 14-10-2018 MC28_F223 5e996942cee547bd2326ee0e708b29d5 254 SUPERFAMILY SSF52540 7 229 1.63E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F223 5e996942cee547bd2326ee0e708b29d5 254 SMART SM00382 36 224 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_F223 5e996942cee547bd2326ee0e708b29d5 254 Pfam PF00005 ABC transporter 27 175 6.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3333 6a739ef813acc637ba0826687d85cf82 110 Pfam PF13077 Protein of unknown function (DUF3909) 1 108 9.7E-75 T 14-10-2018 IPR025073 Protein of unknown function DUF3909 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 Gene3D G3DSA:3.90.226.10 215 388 2.2E-89 T 14-10-2018 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 SUPERFAMILY SSF52096 65 396 2.49E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 Gene3D G3DSA:2.30.42.10 127 214 2.2E-89 T 14-10-2018 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 SUPERFAMILY SSF50156 98 218 1.84E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 Pfam PF13180 PDZ domain 128 200 2.9E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 SMART SM00245 200 391 7.9E-65 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 Pfam PF03572 Peptidase family S41 228 390 3.4E-51 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 80 396 1.4E-119 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 SMART SM00228 127 198 1.2E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 Gene3D G3DSA:1.10.101.10 396 478 9.8E-16 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 Pfam PF01471 Putative peptidoglycan binding domain 415 468 2.5E-15 T 14-10-2018 IPR002477 Peptidoglycan binding-like MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 SUPERFAMILY SSF47090 400 470 1.07E-15 T 14-10-2018 IPR036365 PGBD-like superfamily MC28_4415 dfc1360aac513ccfe809ccd046e08deb 494 Gene3D G3DSA:3.30.750.44 78 366 2.2E-89 T 14-10-2018 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 419 1.6E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5378 4f1428feca22d4060f3230a3d985738d 428 SMART SM00387 310 422 5.6E-42 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5378 4f1428feca22d4060f3230a3d985738d 428 Gene3D G3DSA:1.10.287.130 204 261 9.0E-15 T 14-10-2018 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 Gene3D G3DSA:1.20.1480.50 111 203 2.3E-18 T 14-10-2018 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 Gene3D G3DSA:3.30.565.10 269 426 1.3E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5378 4f1428feca22d4060f3230a3d985738d 428 SMART SM00304 146 198 2.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 SUPERFAMILY SSF47384 182 266 9.81E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 SUPERFAMILY SSF55874 255 420 1.7E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5378 4f1428feca22d4060f3230a3d985738d 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 200 264 5.6E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 Pfam PF00672 HAMP domain 146 193 1.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 SUPERFAMILY SSF158472 146 194 8.37E-11 T 14-10-2018 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 SMART SM00388 199 265 2.3E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 2.4E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 2.4E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 2.4E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5378 4f1428feca22d4060f3230a3d985738d 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 2.4E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_F121 000eee0a090cb474fb6404d97d9a137f 272 Pfam PF03609 PTS system sorbose-specific iic component 10 243 9.8E-73 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 MC28_3502 8e1bd43eead977ced0d41da445b4a1ca 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 189 6.1E-28 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 MC28_3502 8e1bd43eead977ced0d41da445b4a1ca 278 Gene3D G3DSA:3.30.930.10 4 278 1.4E-68 T 14-10-2018 MC28_3502 8e1bd43eead977ced0d41da445b4a1ca 278 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 3 278 67.859 T 14-10-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 MC28_3502 8e1bd43eead977ced0d41da445b4a1ca 278 SUPERFAMILY SSF55681 5 278 3.15E-67 T 14-10-2018 MC28_4010 0798d8272009cfa09e06eb0d6c01089e 374 Pfam PF00561 alpha/beta hydrolase fold 40 330 9.3E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_4010 0798d8272009cfa09e06eb0d6c01089e 374 Gene3D G3DSA:3.40.50.1820 1 374 1.3E-121 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4010 0798d8272009cfa09e06eb0d6c01089e 374 SUPERFAMILY SSF53474 4 368 1.95E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4010 0798d8272009cfa09e06eb0d6c01089e 374 PIRSF PIRSF000443 1 374 2.2E-120 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 MC28_4010 0798d8272009cfa09e06eb0d6c01089e 374 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 1 367 23.656 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 SUPERFAMILY SSF55979 133 254 1.95E-25 T 14-10-2018 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 380 3.1E-124 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 PIRSF PIRSF000804 1 381 2.7E-115 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 Gene3D G3DSA:3.70.10.10 145 378 3.2E-133 T 14-10-2018 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 257 379 1.0E-38 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 SUPERFAMILY SSF55979 1 127 3.73E-23 T 14-10-2018 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 SUPERFAMILY SSF55979 257 380 1.79E-32 T 14-10-2018 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 Gene3D G3DSA:3.10.150.10 1 253 3.2E-133 T 14-10-2018 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 1.9E-36 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 254 2.3E-36 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 MC28_4722 6bdecfa498fa57dccd9f05d317e1014f 381 SMART SM00480 17 376 7.5E-164 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 MC28_1622 1396c6dc6aa38c0f75f7760f085bc1f2 156 SMART SM00347 34 135 1.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1622 1396c6dc6aa38c0f75f7760f085bc1f2 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site MC28_1622 1396c6dc6aa38c0f75f7760f085bc1f2 156 Gene3D G3DSA:1.10.10.10 2 151 7.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1622 1396c6dc6aa38c0f75f7760f085bc1f2 156 Pfam PF13463 Winged helix DNA-binding domain 51 107 1.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1622 1396c6dc6aa38c0f75f7760f085bc1f2 156 SUPERFAMILY SSF46785 37 152 1.06E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3055 4e26b44570d94f385654ef8baab79e65 434 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 434 37.282 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 MC28_3055 4e26b44570d94f385654ef8baab79e65 434 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 337 360 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 MC28_3055 4e26b44570d94f385654ef8baab79e65 434 Gene3D G3DSA:3.50.50.60 290 434 9.2E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3055 4e26b44570d94f385654ef8baab79e65 434 Gene3D G3DSA:3.50.50.60 3 178 4.3E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3055 4e26b44570d94f385654ef8baab79e65 434 SUPERFAMILY SSF51905 7 367 5.08E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3055 4e26b44570d94f385654ef8baab79e65 434 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 5 431 1.5E-235 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 MC28_3055 4e26b44570d94f385654ef8baab79e65 434 Pfam PF01134 Glucose inhibited division protein A 6 368 1.8E-116 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 SUPERFAMILY SSF51735 3 167 7.04E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 Gene3D G3DSA:3.90.110.10 170 441 2.0E-107 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 1.3E-48 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 1.3E-48 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 1.3E-48 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 1.3E-48 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.3E-48 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 1.3E-48 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 1.3E-48 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 Pfam PF02056 Family 4 glycosyl hydrolase 5 186 1.0E-70 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 Gene3D G3DSA:3.40.50.720 2 169 3.6E-73 T 14-10-2018 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 140 171 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 411 4.1E-52 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 MC28_4441 efc3a2cb98158fe1b30cdbcf8cc93ac9 441 SUPERFAMILY SSF56327 172 438 8.64E-101 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 Gene3D G3DSA:3.40.1410.10 57 225 6.0E-59 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 SUPERFAMILY SSF46785 2 60 1.32E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 56 4.4E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 Gene3D G3DSA:1.10.10.10 1 56 5.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 Pfam PF07702 UTRA domain 77 216 3.4E-47 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 46 9.0E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 16 30 9.0E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 SMART SM00345 1 56 3.7E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 SMART SM00866 77 216 1.9E-50 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_3345 c4b5b9bbb875697cba70aa0d8c8db40d 225 SUPERFAMILY SSF64288 44 223 3.45E-58 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_1830 2588e678674852e5516226179bedb7db 411 SUPERFAMILY SSF48264 21 411 1.11E-98 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00359 B-class P450 signature 330 345 2.8E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00359 B-class P450 signature 203 225 2.8E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00359 B-class P450 signature 100 111 2.8E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00359 B-class P450 signature 351 360 2.8E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00359 B-class P450 signature 360 371 2.8E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00359 B-class P450 signature 302 329 2.8E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00359 B-class P450 signature 284 295 2.8E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00359 B-class P450 signature 146 162 2.8E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00359 B-class P450 signature 163 178 2.8E-55 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 353 362 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00385 P450 superfamily signature 249 266 2.5E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00385 P450 superfamily signature 284 295 2.5E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00385 P450 superfamily signature 351 360 2.5E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 PRINTS PR00385 P450 superfamily signature 360 371 2.5E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 Pfam PF00067 Cytochrome P450 90 380 2.6E-30 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_1830 2588e678674852e5516226179bedb7db 411 Gene3D G3DSA:1.10.630.10 9 411 9.0E-133 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_4702 67abe2ce1297882683646f6185542187 590 SUPERFAMILY SSF64182 272 574 1.01E-69 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily MC28_4702 67abe2ce1297882683646f6185542187 590 Gene3D G3DSA:3.90.1640.10 250 465 2.2E-50 T 14-10-2018 MC28_4702 67abe2ce1297882683646f6185542187 590 Pfam PF02272 DHHA1 domain 451 577 2.9E-11 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 MC28_4702 67abe2ce1297882683646f6185542187 590 Gene3D G3DSA:3.10.310.30 466 585 2.6E-6 T 14-10-2018 MC28_4702 67abe2ce1297882683646f6185542187 590 SMART SM00267 65 232 3.2E-5 T 14-10-2018 IPR000160 GGDEF domain MC28_4702 67abe2ce1297882683646f6185542187 590 Pfam PF01368 DHH family 272 429 1.5E-22 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 MC28_4702 67abe2ce1297882683646f6185542187 590 Gene3D G3DSA:3.30.450.20 1 94 2.5E-29 T 14-10-2018 MC28_3649 35592d3bc925df615e62457afee80325 104 SUPERFAMILY SSF55248 4 94 1.23E-25 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 MC28_3649 35592d3bc925df615e62457afee80325 104 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 93 3.5E-23 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 MC28_3649 35592d3bc925df615e62457afee80325 104 Gene3D G3DSA:3.30.1360.20 3 101 1.5E-29 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 MC28_4718 1b8918688b59d28e3256c55d4ffa84b3 255 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 246 32.994 T 14-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 MC28_4718 1b8918688b59d28e3256c55d4ffa84b3 255 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 58 241 1.2E-67 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4718 1b8918688b59d28e3256c55d4ffa84b3 255 Pfam PF02096 60Kd inner membrane protein 59 241 2.3E-60 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 MC28_4718 1b8918688b59d28e3256c55d4ffa84b3 255 PRINTS PR00701 60kDa inner membrane protein signature 124 147 2.9E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 MC28_4718 1b8918688b59d28e3256c55d4ffa84b3 255 PRINTS PR00701 60kDa inner membrane protein signature 208 231 2.9E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 MC28_4718 1b8918688b59d28e3256c55d4ffa84b3 255 PRINTS PR01900 YidC translocation/secretion protein signature 197 221 8.7E-6 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 MC28_4718 1b8918688b59d28e3256c55d4ffa84b3 255 PRINTS PR01900 YidC translocation/secretion protein signature 175 190 8.7E-6 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 MC28_3509 0a742b737bdc61c30e2143a44934b375 85 Pfam PF13126 Protein of unknown function (DUF3975) 1 80 2.2E-45 T 14-10-2018 IPR025015 Protein of unknown function DUF3975 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 Gene3D G3DSA:3.10.450.490 62 141 6.1E-6 T 14-10-2018 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 257 400 5.8E-52 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 Gene3D G3DSA:3.10.170.10 255 404 5.6E-66 T 14-10-2018 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 Pfam PF03413 Peptidase propeptide and YPEB domain 151 220 2.4E-8 T 14-10-2018 IPR025711 PepSY domain MC28_5326 028848849c8e332ef000b0d1a9bef034 566 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 355 375 4.9E-31 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 391 407 4.9E-31 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 480 496 4.9E-31 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 412 423 4.9E-31 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 403 565 8.8E-65 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 Gene3D G3DSA:3.10.450.40 142 225 1.8E-5 T 14-10-2018 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 SUPERFAMILY SSF55486 256 565 7.33E-104 T 14-10-2018 MC28_5326 028848849c8e332ef000b0d1a9bef034 566 Gene3D G3DSA:1.10.390.10 405 565 4.0E-74 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily MC28_5326 028848849c8e332ef000b0d1a9bef034 566 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 84 134 4.0E-14 T 14-10-2018 IPR011096 FTP domain MC28_0458 b69c44bd1445aac22d685539afcb6846 475 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 29 474 2.1E-178 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_0458 b69c44bd1445aac22d685539afcb6846 475 Pfam PF00425 chorismate binding enzyme 213 466 1.1E-99 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal MC28_0458 b69c44bd1445aac22d685539afcb6846 475 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 162 2.9E-35 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_0458 b69c44bd1445aac22d685539afcb6846 475 Gene3D G3DSA:3.60.120.10 1 475 1.0E-170 T 14-10-2018 IPR005801 ADC synthase GO:0009058 MC28_0458 b69c44bd1445aac22d685539afcb6846 475 SUPERFAMILY SSF56322 19 474 4.32E-156 T 14-10-2018 IPR005801 ADC synthase GO:0009058 MC28_0458 b69c44bd1445aac22d685539afcb6846 475 PRINTS PR00095 Anthranilate synthase component I signature 328 341 4.1E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_0458 b69c44bd1445aac22d685539afcb6846 475 PRINTS PR00095 Anthranilate synthase component I signature 314 327 4.1E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_0458 b69c44bd1445aac22d685539afcb6846 475 PRINTS PR00095 Anthranilate synthase component I signature 423 437 4.1E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_0458 b69c44bd1445aac22d685539afcb6846 475 PRINTS PR00095 Anthranilate synthase component I signature 408 422 4.1E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_G182 f20c4187910092dbeb636d9eaceee845 327 SUPERFAMILY SSF51695 38 322 2.05E-43 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_G182 f20c4187910092dbeb636d9eaceee845 327 Gene3D G3DSA:3.20.20.190 24 251 4.3E-33 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_G182 f20c4187910092dbeb636d9eaceee845 327 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 44 200 4.3E-26 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 MC28_2846 da27e47d415fc5b2f4966cdbcb1fa844 371 Gene3D G3DSA:3.90.1150.10 240 371 5.9E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2846 da27e47d415fc5b2f4966cdbcb1fa844 371 Gene3D G3DSA:3.40.640.10 1 238 1.3E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2846 da27e47d415fc5b2f4966cdbcb1fa844 371 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 4 363 1.2E-98 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase MC28_2846 da27e47d415fc5b2f4966cdbcb1fa844 371 SUPERFAMILY SSF53383 3 367 6.66E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_2846 da27e47d415fc5b2f4966cdbcb1fa844 371 PIRSF PIRSF000390 1 371 3.3E-106 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase MC28_3648 ab71603e2b1d80dd7b50404c3a7df157 584 SUPERFAMILY SSF56534 10 335 7.59E-83 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily MC28_3648 ab71603e2b1d80dd7b50404c3a7df157 584 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 22 146 8.2E-11 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 MC28_3648 ab71603e2b1d80dd7b50404c3a7df157 584 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 201 290 3.4E-19 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 MC28_2337 eeff21ca8e9671f3779d1b207193cad8 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 4.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2337 eeff21ca8e9671f3779d1b207193cad8 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 4.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2337 eeff21ca8e9671f3779d1b207193cad8 241 SUPERFAMILY SSF48008 85 226 2.49E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_2337 eeff21ca8e9671f3779d1b207193cad8 241 Pfam PF07840 FadR C-terminal domain 71 226 2.4E-33 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 MC28_2337 eeff21ca8e9671f3779d1b207193cad8 241 SMART SM00345 11 70 9.9E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2337 eeff21ca8e9671f3779d1b207193cad8 241 Gene3D G3DSA:1.10.10.10 1 78 8.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2337 eeff21ca8e9671f3779d1b207193cad8 241 SUPERFAMILY SSF46785 6 74 8.18E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2337 eeff21ca8e9671f3779d1b207193cad8 241 Gene3D G3DSA:1.20.120.530 79 232 1.8E-37 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_2337 eeff21ca8e9671f3779d1b207193cad8 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 65 2.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1354 920ba3436d282113fa3860bfa93fbc9c 474 Gene3D G3DSA:3.40.1010.10 1 118 4.1E-41 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 MC28_1354 920ba3436d282113fa3860bfa93fbc9c 474 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 MC28_1354 920ba3436d282113fa3860bfa93fbc9c 474 SUPERFAMILY SSF53790 1 252 1.83E-74 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 MC28_1354 920ba3436d282113fa3860bfa93fbc9c 474 Gene3D G3DSA:3.40.50.10090 253 358 1.5E-6 T 14-10-2018 MC28_1354 920ba3436d282113fa3860bfa93fbc9c 474 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 238 2.2E-90 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 MC28_1354 920ba3436d282113fa3860bfa93fbc9c 474 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 214 1.9E-45 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 MC28_1354 920ba3436d282113fa3860bfa93fbc9c 474 SUPERFAMILY SSF69618 251 330 9.81E-8 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_1354 920ba3436d282113fa3860bfa93fbc9c 474 PIRSF PIRSF036426 1 254 5.6E-96 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 MC28_1354 920ba3436d282113fa3860bfa93fbc9c 474 Gene3D G3DSA:3.30.950.10 119 248 2.2E-41 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 MC28_4492 381367f8cd35b7180abbf7099287dd90 470 Pfam PF00672 HAMP domain 181 228 4.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4492 381367f8cd35b7180abbf7099287dd90 470 Gene3D G3DSA:3.30.565.10 306 456 2.5E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4492 381367f8cd35b7180abbf7099287dd90 470 SUPERFAMILY SSF47384 228 304 4.12E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_4492 381367f8cd35b7180abbf7099287dd90 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 303 7.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4492 381367f8cd35b7180abbf7099287dd90 470 Gene3D G3DSA:1.10.287.130 236 305 2.9E-15 T 14-10-2018 MC28_4492 381367f8cd35b7180abbf7099287dd90 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 456 1.3E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4492 381367f8cd35b7180abbf7099287dd90 470 SMART SM00387 350 458 1.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4492 381367f8cd35b7180abbf7099287dd90 470 SMART SM00388 241 306 7.9E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4492 381367f8cd35b7180abbf7099287dd90 470 SMART SM00304 181 233 1.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4492 381367f8cd35b7180abbf7099287dd90 470 Gene3D G3DSA:1.20.1480.50 147 235 8.4E-11 T 14-10-2018 MC28_4492 381367f8cd35b7180abbf7099287dd90 470 SUPERFAMILY SSF55874 310 454 5.37E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4492 381367f8cd35b7180abbf7099287dd90 470 SUPERFAMILY SSF158472 181 229 3.27E-8 T 14-10-2018 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 SUPERFAMILY SSF56978 43 511 8.11E-204 T 14-10-2018 IPR036359 Thiol-activated cytolysin superfamily GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 Gene3D G3DSA:2.60.40.1430 404 512 6.4E-49 T 14-10-2018 IPR038700 Thiol-activated cytolysin, C-terminal domain superfamily MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 Gene3D G3DSA:3.30.1040.20 67 398 3.2E-139 T 14-10-2018 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 Pfam PF01289 Thiol-activated cytolysin 51 402 4.5E-145 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 ProSitePatterns PS00481 Thiol-activated cytolysins signature. 470 481 - T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 116 132 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 190 205 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 271 294 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 324 341 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 486 506 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 411 428 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 428 444 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 58 75 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 132 150 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 88 110 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 372 399 6.2E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 Gene3D G3DSA:3.90.840.10 51 386 3.2E-139 T 14-10-2018 IPR036363 Thiol-activated cytolysin, alpha-beta domain superfamily GO:0009405|GO:0015485 MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 Pfam PF17440 Thiol-activated cytolysin beta sandwich domain 406 506 4.4E-42 T 14-10-2018 IPR035390 Thiol-activated cytolysin C-terminal MC28_2437 28137714c6bd680f30bf79a9e1952e57 512 Gene3D G3DSA:3.40.30.40 192 362 3.2E-139 T 14-10-2018 MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 TIGRFAM TIGR00498 lexA: repressor LexA 18 222 2.8E-79 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 177 189 3.2E-12 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 137 147 3.2E-12 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 148 159 3.2E-12 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 SUPERFAMILY SSF46785 20 87 2.46E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 Gene3D G3DSA:1.10.10.10 19 85 3.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 Hamap MF_00015 LexA repressor [lexA]. 20 222 35.65 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 Gene3D G3DSA:2.10.109.10 105 222 8.7E-42 T 14-10-2018 MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 Pfam PF01726 LexA DNA binding domain 18 82 1.5E-30 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 Pfam PF00717 Peptidase S24-like 140 204 7.6E-17 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C MC28_2835 4533aeff78598a0c8d61bd5ca7c8ad40 223 SUPERFAMILY SSF51306 99 221 3.66E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily MC28_2224 d74626c676658ee86b6035cfb00b926d 212 SUPERFAMILY SSF55469 9 210 6.28E-61 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_2224 d74626c676658ee86b6035cfb00b926d 212 Pfam PF00881 Nitroreductase family 15 192 2.2E-33 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_2224 d74626c676658ee86b6035cfb00b926d 212 Gene3D G3DSA:3.40.109.10 2 212 2.5E-64 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_G223 ce6e11cbef5c19d99cf83f90236a7d33 161 Gene3D G3DSA:3.40.1350.10 1 137 3.5E-38 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 MC28_G223 ce6e11cbef5c19d99cf83f90236a7d33 161 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 161 45.193 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 MC28_G223 ce6e11cbef5c19d99cf83f90236a7d33 161 SUPERFAMILY SSF52980 10 127 3.75E-30 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 MC28_G223 ce6e11cbef5c19d99cf83f90236a7d33 161 Pfam PF03838 Recombination protein U 7 126 1.3E-28 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 MC28_0491 94a4b31667b9fa86068acf99a3f95644 200 Pfam PF12870 Domain of unknown function (DUF4878) 28 109 7.1E-6 T 14-10-2018 IPR024267 Domain of unknown function (DUF4878) MC28_4451 0ab36b6aabeaa8c8df54ed1d34d54dcf 405 Pfam PF00375 Sodium:dicarboxylate symporter family 10 392 5.2E-96 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 MC28_4451 0ab36b6aabeaa8c8df54ed1d34d54dcf 405 SUPERFAMILY SSF118215 7 392 5.75E-84 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_4451 0ab36b6aabeaa8c8df54ed1d34d54dcf 405 PRINTS PR00173 Glutamate-aspartate symporter signature 182 201 8.0E-16 T 14-10-2018 MC28_4451 0ab36b6aabeaa8c8df54ed1d34d54dcf 405 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 8.0E-16 T 14-10-2018 MC28_4451 0ab36b6aabeaa8c8df54ed1d34d54dcf 405 PRINTS PR00173 Glutamate-aspartate symporter signature 284 310 8.0E-16 T 14-10-2018 MC28_4451 0ab36b6aabeaa8c8df54ed1d34d54dcf 405 PRINTS PR00173 Glutamate-aspartate symporter signature 135 157 8.0E-16 T 14-10-2018 MC28_4451 0ab36b6aabeaa8c8df54ed1d34d54dcf 405 PRINTS PR00173 Glutamate-aspartate symporter signature 347 367 8.0E-16 T 14-10-2018 MC28_4451 0ab36b6aabeaa8c8df54ed1d34d54dcf 405 Gene3D G3DSA:1.10.3860.10 1 397 9.7E-81 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_4886 b0e6200f1d6aa488974a82d6790d9b61 70 Pfam PF13131 Protein of unknown function (DUF3951) 5 53 1.4E-25 T 14-10-2018 IPR025028 Protein of unknown function DUF3951 MC28_3475 5f8bc65e61b5067f695fa56a99366525 130 Pfam PF03780 Asp23 family, cell envelope-related function 14 118 6.1E-36 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 MC28_4541 11dade4bef989d1e8015ac8a91736732 133 Gene3D G3DSA:2.60.15.10 1 88 1.2E-32 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4541 11dade4bef989d1e8015ac8a91736732 133 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 130 7.7E-15 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain MC28_4541 11dade4bef989d1e8015ac8a91736732 133 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 129 7.3E-38 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4541 11dade4bef989d1e8015ac8a91736732 133 SUPERFAMILY SSF51344 2 83 3.01E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4541 11dade4bef989d1e8015ac8a91736732 133 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 85 2.0E-38 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4541 11dade4bef989d1e8015ac8a91736732 133 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 82 7.5E-30 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4541 11dade4bef989d1e8015ac8a91736732 133 Gene3D G3DSA:1.20.5.440 89 133 1.5E-16 T 14-10-2018 MC28_4541 11dade4bef989d1e8015ac8a91736732 133 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 129 23.033 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4541 11dade4bef989d1e8015ac8a91736732 133 SUPERFAMILY SSF46604 87 131 5.23E-10 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 Pfam PF03793 PASTA domain 584 637 4.4E-12 T 14-10-2018 IPR005543 PASTA domain MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 SUPERFAMILY SSF56601 235 567 8.91E-98 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 SUPERFAMILY SSF54184 584 637 2.49E-11 T 14-10-2018 MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 11 638 0.0 T 14-10-2018 IPR011927 Stage V sporulation protein D MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 Gene3D G3DSA:3.90.1310.30 49 220 1.1E-45 T 14-10-2018 MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 Gene3D G3DSA:3.30.10.20 581 637 4.2E-8 T 14-10-2018 MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 SUPERFAMILY SSF56519 51 220 1.26E-43 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 Pfam PF00905 Penicillin binding protein transpeptidase domain 246 556 3.2E-88 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 SMART SM00740 580 638 1.1E-14 T 14-10-2018 IPR005543 PASTA domain MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 Gene3D G3DSA:3.40.710.10 283 478 3.7E-110 T 14-10-2018 MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 Gene3D G3DSA:3.30.450.330 222 560 3.7E-110 T 14-10-2018 MC28_3137 22ac610c60e93d22421212a3e856a2b5 638 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 202 2.2E-22 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 Gene3D G3DSA:3.40.50.300 324 746 4.8E-141 T 14-10-2018 MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 Gene3D G3DSA:3.40.50.300 512 740 4.8E-141 T 14-10-2018 MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 Gene3D G3DSA:1.10.150.20 94 157 3.6E-5 T 14-10-2018 MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 Pfam PF14490 Helix-hairpin-helix containing domain 156 247 5.1E-29 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 14 753 29.571 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 Gene3D G3DSA:2.30.30.940 598 677 4.8E-141 T 14-10-2018 MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 Gene3D G3DSA:1.10.10.2220 198 307 2.3E-14 T 14-10-2018 MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 Pfam PF13604 AAA domain 341 548 6.9E-50 T 14-10-2018 MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 Pfam PF13538 UvrD-like helicase C-terminal domain 676 724 1.4E-16 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 20 749 2.0E-246 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 MC28_3685 d33a29e6442c2b581f54afa52dfe0cda 778 SUPERFAMILY SSF52540 336 730 2.45E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1838 fb856d6fe421f2590af97d699404d05a 590 SMART SM00091 108 175 1.1E-7 T 14-10-2018 IPR000014 PAS domain MC28_1838 fb856d6fe421f2590af97d699404d05a 590 SMART SM00091 234 300 0.23 T 14-10-2018 IPR000014 PAS domain MC28_1838 fb856d6fe421f2590af97d699404d05a 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 567 2.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1838 fb856d6fe421f2590af97d699404d05a 590 SUPERFAMILY SSF55785 219 340 3.38E-14 T 14-10-2018 IPR035965 PAS domain superfamily MC28_1838 fb856d6fe421f2590af97d699404d05a 590 Pfam PF00989 PAS fold 108 193 2.0E-10 T 14-10-2018 IPR013767 PAS fold GO:0006355 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 SUPERFAMILY SSF55785 103 220 1.4E-14 T 14-10-2018 IPR035965 PAS domain superfamily MC28_1838 fb856d6fe421f2590af97d699404d05a 590 SMART SM00387 462 569 3.7E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1838 fb856d6fe421f2590af97d699404d05a 590 SUPERFAMILY SSF47384 353 418 7.06E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 Pfam PF00512 His Kinase A (phospho-acceptor) domain 359 418 1.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 Pfam PF08448 PAS fold 240 343 4.4E-17 T 14-10-2018 IPR013656 PAS fold-4 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 Gene3D G3DSA:1.10.287.130 360 416 4.7E-16 T 14-10-2018 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 SUPERFAMILY SSF55874 411 569 2.75E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1838 fb856d6fe421f2590af97d699404d05a 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 528 3.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 547 3.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 3.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 566 3.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 Gene3D G3DSA:3.30.450.20 105 233 5.3E-15 T 14-10-2018 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 Gene3D G3DSA:3.30.565.10 419 578 1.7E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1838 fb856d6fe421f2590af97d699404d05a 590 Gene3D G3DSA:3.30.450.20 234 354 4.3E-15 T 14-10-2018 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 SMART SM00388 357 420 8.0E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1838 fb856d6fe421f2590af97d699404d05a 590 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 235 348 2.1E-6 T 14-10-2018 IPR000014 PAS domain MC28_1838 fb856d6fe421f2590af97d699404d05a 590 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 105 229 4.4E-12 T 14-10-2018 IPR000014 PAS domain MC28_0236 5d94cd030e9e8e681964c4a9a5d140a9 160 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 156 40.727 T 14-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 MC28_0236 5d94cd030e9e8e681964c4a9a5d140a9 160 Pfam PF13581 Histidine kinase-like ATPase domain 12 140 3.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0236 5d94cd030e9e8e681964c4a9a5d140a9 160 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 1 156 2.5E-71 T 14-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 MC28_0236 5d94cd030e9e8e681964c4a9a5d140a9 160 SUPERFAMILY SSF55874 31 135 4.32E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0236 5d94cd030e9e8e681964c4a9a5d140a9 160 Gene3D G3DSA:3.30.565.10 5 150 6.7E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_E038 6ddf52260283593bd63783bb846f87b4 634 Pfam PF00555 delta endotoxin 282 475 2.2E-29 T 14-10-2018 IPR001178 Pesticidal crystal protein, central domain GO:0005102|GO:0009405 MC28_E038 6ddf52260283593bd63783bb846f87b4 634 Gene3D G3DSA:1.20.190.10 22 274 4.2E-60 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E038 6ddf52260283593bd63783bb846f87b4 634 SUPERFAMILY SSF49785 485 632 9.07E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E038 6ddf52260283593bd63783bb846f87b4 634 SUPERFAMILY SSF51096 278 476 1.45E-32 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_E038 6ddf52260283593bd63783bb846f87b4 634 SUPERFAMILY SSF56849 5 274 1.16E-47 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E038 6ddf52260283593bd63783bb846f87b4 634 Gene3D G3DSA:2.100.10.10 288 474 1.2E-90 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_E038 6ddf52260283593bd63783bb846f87b4 634 Pfam PF03944 delta endotoxin 493 632 9.6E-24 T 14-10-2018 IPR005638 Pesticidal crystal protein, C-terminal GO:0090729 MC28_E038 6ddf52260283593bd63783bb846f87b4 634 Gene3D G3DSA:2.60.120.260 283 632 1.2E-90 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E038 6ddf52260283593bd63783bb846f87b4 634 Pfam PF03945 delta endotoxin, N-terminal domain 212 274 1.4E-7 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_E038 6ddf52260283593bd63783bb846f87b4 634 Pfam PF03945 delta endotoxin, N-terminal domain 97 181 1.2E-5 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_5208 9a386e97fc83355a3b391ba8db3febef 236 SUPERFAMILY SSF52949 24 197 6.39E-30 T 14-10-2018 MC28_5208 9a386e97fc83355a3b391ba8db3febef 236 Gene3D G3DSA:3.40.220.10 12 220 1.9E-48 T 14-10-2018 MC28_5208 9a386e97fc83355a3b391ba8db3febef 236 SMART SM00506 46 182 1.1E-8 T 14-10-2018 IPR002589 Macro domain MC28_5208 9a386e97fc83355a3b391ba8db3febef 236 Pfam PF01661 Macro domain 64 182 1.0E-13 T 14-10-2018 IPR002589 Macro domain MC28_G160 0d03100b920734041f94c115f7b0353a 280 Gene3D G3DSA:3.20.20.370 29 268 3.6E-58 T 14-10-2018 MC28_G160 0d03100b920734041f94c115f7b0353a 280 SUPERFAMILY SSF88713 75 266 3.71E-52 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_G160 0d03100b920734041f94c115f7b0353a 280 Pfam PF01522 Polysaccharide deacetylase 74 186 1.4E-26 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 141 4.0E-41 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 Gene3D G3DSA:3.40.50.1370 129 272 2.6E-103 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 289 4.5E-22 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 209 218 1.5E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 128 145 1.5E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 274 288 1.5E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 73 82 1.5E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 1.5E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 250 255 1.5E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 SUPERFAMILY SSF53671 2 294 1.11E-92 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 Gene3D G3DSA:3.40.50.1370 8 289 2.6E-103 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 281 9.2E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 9.2E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 246 255 9.2E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 9.2E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 45 52 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 5 291 3.5E-99 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3112 acc5a45cf50cc6539126de19a9a96ef7 306 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 3 295 40.288 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_1714 721d6a22487b6b37cbae013bbf6e3004 377 Gene3D G3DSA:1.20.1170.10 41 377 2.8E-117 T 14-10-2018 MC28_1714 721d6a22487b6b37cbae013bbf6e3004 377 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 48 224 2.3E-52 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_1714 721d6a22487b6b37cbae013bbf6e3004 377 SUPERFAMILY SSF58100 36 371 1.54E-98 T 14-10-2018 MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 Pfam PF00106 short chain dehydrogenase 8 196 1.9E-66 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 SUPERFAMILY SSF51735 5 225 1.59E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 PIRSF PIRSF000126 3 238 2.0E-63 T 14-10-2018 MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 Gene3D G3DSA:3.40.50.720 3 236 3.7E-74 T 14-10-2018 MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1164 20d4c8e9060122482ed5625dc29c7054 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3533 fdf12bfbd61bc225e2a0d4d7fa290cdb 84 SUPERFAMILY SSF54523 1 63 2.9E-6 T 14-10-2018 MC28_3712 88902a127903622d02048df20deafa70 333 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 328 9.9E-149 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 MC28_3712 88902a127903622d02048df20deafa70 333 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 332 2.0E-41 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 MC28_3712 88902a127903622d02048df20deafa70 333 SUPERFAMILY SSF46785 257 331 4.29E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3712 88902a127903622d02048df20deafa70 333 SUPERFAMILY SSF52540 21 253 5.44E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3712 88902a127903622d02048df20deafa70 333 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 236 6.9E-118 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 MC28_3712 88902a127903622d02048df20deafa70 333 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 3.2E-34 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 MC28_3712 88902a127903622d02048df20deafa70 333 Gene3D G3DSA:3.40.50.300 21 182 3.5E-41 T 14-10-2018 MC28_3712 88902a127903622d02048df20deafa70 333 SMART SM00382 52 183 1.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3712 88902a127903622d02048df20deafa70 333 Gene3D G3DSA:1.10.8.60 183 257 5.2E-30 T 14-10-2018 MC28_3712 88902a127903622d02048df20deafa70 333 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 333 174.661 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 MC28_3712 88902a127903622d02048df20deafa70 333 Gene3D G3DSA:1.10.10.10 258 333 7.8E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5442 2241805c825ee81bb79dd374858c1061 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 294 8.3E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_5442 2241805c825ee81bb79dd374858c1061 297 Gene3D G3DSA:1.10.3720.10 74 296 6.7E-33 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5442 2241805c825ee81bb79dd374858c1061 297 SUPERFAMILY SSF161098 30 288 3.64E-35 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5442 2241805c825ee81bb79dd374858c1061 297 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 15 294 7.9E-84 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 MC28_2831 1aa0dfc40bbecaa4c11c4bf15b4ff61f 328 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 22 287 1.9E-71 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 MC28_2831 1aa0dfc40bbecaa4c11c4bf15b4ff61f 328 Gene3D G3DSA:3.40.190.10 64 295 3.3E-73 T 14-10-2018 MC28_2831 1aa0dfc40bbecaa4c11c4bf15b4ff61f 328 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 64 314 2.1E-66 T 14-10-2018 MC28_2831 1aa0dfc40bbecaa4c11c4bf15b4ff61f 328 SUPERFAMILY SSF53850 57 323 6.15E-51 T 14-10-2018 MC28_2831 1aa0dfc40bbecaa4c11c4bf15b4ff61f 328 Gene3D G3DSA:3.40.190.10 147 263 3.3E-73 T 14-10-2018 MC28_2831 1aa0dfc40bbecaa4c11c4bf15b4ff61f 328 SMART SM00062 59 305 0.0012 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_3293 62bc8e116bb67dae6189f67bd098af8c 762 Gene3D G3DSA:3.20.20.210 7 523 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 MC28_3293 62bc8e116bb67dae6189f67bd098af8c 762 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 430 752 4.3E-148 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 MC28_3293 62bc8e116bb67dae6189f67bd098af8c 762 Gene3D G3DSA:3.20.20.210 388 755 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 MC28_3293 62bc8e116bb67dae6189f67bd098af8c 762 PIRSF PIRSF000382 2 762 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 MC28_3293 62bc8e116bb67dae6189f67bd098af8c 762 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 756 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 MC28_3293 62bc8e116bb67dae6189f67bd098af8c 762 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 757 34.266 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 MC28_3293 62bc8e116bb67dae6189f67bd098af8c 762 SUPERFAMILY SSF51726 395 754 3.14E-109 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 MC28_3293 62bc8e116bb67dae6189f67bd098af8c 762 SUPERFAMILY SSF51726 5 391 2.49E-98 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 MC28_3293 62bc8e116bb67dae6189f67bd098af8c 762 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 313 1.1E-120 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 Gene3D G3DSA:3.40.50.1000 5 221 6.5E-70 T 14-10-2018 IPR023214 HAD superfamily MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 110 123 5.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 5.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 5.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 5.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 SUPERFAMILY SSF56784 2 224 2.13E-45 T 14-10-2018 IPR036412 HAD-like superfamily MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 199 1.0E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 225 3.2E-65 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 85 191 1.7E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 198 7.9E-27 T 14-10-2018 MC28_2475 2f8ba81238a9990e4c3e0d4cfcbd1752 236 Gene3D G3DSA:1.10.150.240 16 100 6.5E-70 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_1509 d6c197af5843f84e79dc5867e26579bc 134 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 15 133 1.3E-15 T 14-10-2018 IPR006524 Transcription activator, ArpU family MC28_3127 d0bd5217af4f9358394d7038285b2f1d 269 Pfam PF03419 Sporulation factor SpoIIGA 1 260 7.6E-71 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 MC28_3127 d0bd5217af4f9358394d7038285b2f1d 269 PIRSF PIRSF018571 1 263 5.2E-78 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 MC28_3127 d0bd5217af4f9358394d7038285b2f1d 269 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 1 261 1.2E-99 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 MC28_0512 4804d1259ea626ec8b8e169c6f691068 795 SUPERFAMILY SSF55486 263 429 6.33E-17 T 14-10-2018 MC28_0512 4804d1259ea626ec8b8e169c6f691068 795 Pfam PF05547 Immune inhibitor A peptidase M6 148 791 0.0 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 MC28_0512 4804d1259ea626ec8b8e169c6f691068 795 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 183 492 9.2E-87 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 MC28_0512 4804d1259ea626ec8b8e169c6f691068 795 PIRSF PIRSF007519 1 795 0.0 T 14-10-2018 IPR012300 Peptidase M6, InhA MC28_4243 37e9095b37896162a880fc2e2ae442c7 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 8.2E-76 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 MC28_4243 37e9095b37896162a880fc2e2ae442c7 465 SUPERFAMILY SSF101960 32 462 1.03E-139 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily MC28_4243 37e9095b37896162a880fc2e2ae442c7 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 1.3E-231 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 PRINTS PR00118 Beta-lactamase class A signature 227 252 6.0E-70 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 PRINTS PR00118 Beta-lactamase class A signature 263 278 6.0E-70 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 PRINTS PR00118 Beta-lactamase class A signature 94 118 6.0E-70 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 PRINTS PR00118 Beta-lactamase class A signature 125 142 6.0E-70 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 PRINTS PR00118 Beta-lactamase class A signature 165 190 6.0E-70 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 PRINTS PR00118 Beta-lactamase class A signature 201 225 6.0E-70 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 PRINTS PR00118 Beta-lactamase class A signature 280 295 6.0E-70 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 ProSitePatterns PS00146 Beta-lactamase class-A active site. 127 142 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 Pfam PF13354 Beta-lactamase enzyme family 115 320 3.1E-30 T 14-10-2018 MC28_1711 91c00e69d8a25084505450abb0731a3e 348 SUPERFAMILY SSF56601 93 344 2.29E-72 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1711 91c00e69d8a25084505450abb0731a3e 348 Gene3D G3DSA:3.40.710.10 78 347 1.5E-80 T 14-10-2018 MC28_2482 edbceafaefd4f1d4fdfb992c8873975e 126 Gene3D G3DSA:3.10.180.10 1 126 7.7E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2482 edbceafaefd4f1d4fdfb992c8873975e 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 2.6E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_2482 edbceafaefd4f1d4fdfb992c8873975e 126 SUPERFAMILY SSF54593 1 125 5.24E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 2.1E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 308 2.1E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 352 2.1E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 294 2.1E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 198 3.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 SUPERFAMILY SSF158472 85 129 1.57E-5 T 14-10-2018 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 Gene3D G3DSA:3.30.565.10 202 357 1.8E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 SUPERFAMILY SSF47384 116 199 1.59E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 244 353 2.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 SMART SM00387 243 355 1.3E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 Gene3D G3DSA:1.10.287.130 138 194 6.9E-16 T 14-10-2018 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 Gene3D G3DSA:1.20.1480.50 36 137 2.1E-6 T 14-10-2018 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 SMART SM00388 133 199 6.2E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1162 42ab213a7c9ebb13e99b23dceda9b422 357 SUPERFAMILY SSF55874 189 353 1.28E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G395 1ef6d0090f5ea877af321770b5085a7f 86 SUPERFAMILY SSF51126 22 86 9.14E-19 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor MC28_G395 1ef6d0090f5ea877af321770b5085a7f 86 Pfam PF07602 Protein of unknown function (DUF1565) 29 69 3.1E-5 T 14-10-2018 IPR011459 Domain of unknown function DUF1565 MC28_G395 1ef6d0090f5ea877af321770b5085a7f 86 Gene3D G3DSA:2.160.20.10 22 86 4.0E-25 T 14-10-2018 IPR012334 Pectin lyase fold MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 TIGRFAM TIGR01229 rocF_arginase: arginase 6 296 5.1E-105 T 14-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 PRINTS PR00116 Arginase signature 254 268 2.5E-40 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 PRINTS PR00116 Arginase signature 117 144 2.5E-40 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 PRINTS PR00116 Arginase signature 94 109 2.5E-40 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 PRINTS PR00116 Arginase signature 219 248 2.5E-40 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 PRINTS PR00116 Arginase signature 171 189 2.5E-40 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 ProSitePatterns PS01053 Arginase family signature. 222 243 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 Pfam PF00491 Arginase family 4 292 1.3E-79 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 PIRSF PIRSF036979 1 294 6.8E-40 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 SUPERFAMILY SSF52768 4 294 8.46E-93 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily MC28_4865 ebaa7f799bc6e1bff1ebfe55264c00b6 297 Gene3D G3DSA:3.40.800.10 2 297 3.5E-115 T 14-10-2018 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Gene3D G3DSA:1.10.150.390 1129 1190 4.1E-29 T 14-10-2018 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Gene3D G3DSA:1.10.40.90 363 405 1.4E-23 T 14-10-2018 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 5.9E-37 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Gene3D G3DSA:1.10.132.30 660 794 4.5E-59 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1191 18.734 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Gene3D G3DSA:2.40.50.100 966 1028 1.7E-66 T 14-10-2018 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 760 5.4E-15 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Pfam PF04998 RNA polymerase Rpb1, domain 5 994 1128 4.6E-14 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 2.6E-89 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1180 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 SMART SM00663 224 503 2.5E-186 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Pfam PF00623 RNA polymerase Rpb1, domain 2 378 474 1.8E-29 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 386 1.8E-9 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Gene3D G3DSA:1.10.1790.20 950 1127 1.7E-66 T 14-10-2018 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 989 1.8E-52 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 SUPERFAMILY SSF64484 5 1180 0.0 T 14-10-2018 MC28_4815 80862d06e0ebd7f8c80c7ad9cc64efc0 1203 Gene3D G3DSA:1.10.274.100 479 659 1.7E-47 T 14-10-2018 MC28_0045 1ad23930dc2c4acf9dc05e2a156e1c35 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0045 1ad23930dc2c4acf9dc05e2a156e1c35 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 1.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0045 1ad23930dc2c4acf9dc05e2a156e1c35 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0045 1ad23930dc2c4acf9dc05e2a156e1c35 156 SMART SM00347 30 129 4.6E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0045 1ad23930dc2c4acf9dc05e2a156e1c35 156 Gene3D G3DSA:1.10.10.10 2 150 1.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0045 1ad23930dc2c4acf9dc05e2a156e1c35 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 102 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site MC28_0045 1ad23930dc2c4acf9dc05e2a156e1c35 156 Pfam PF12802 MarR family 54 93 1.6E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0045 1ad23930dc2c4acf9dc05e2a156e1c35 156 SUPERFAMILY SSF46785 10 140 4.43E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2094 bd9e77fea21a05a090efe994f07a65d6 126 SMART SM00345 15 74 0.0046 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2094 bd9e77fea21a05a090efe994f07a65d6 126 SUPERFAMILY SSF46785 8 81 2.48E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2094 bd9e77fea21a05a090efe994f07a65d6 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 4.7E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2094 bd9e77fea21a05a090efe994f07a65d6 126 Gene3D G3DSA:1.10.10.10 10 125 2.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1077 6e281c1d8da7716e477af8fab465ae48 427 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 122 8.0E-31 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 MC28_1077 6e281c1d8da7716e477af8fab465ae48 427 Gene3D G3DSA:3.90.230.10 172 427 4.3E-90 T 14-10-2018 MC28_1077 6e281c1d8da7716e477af8fab465ae48 427 SMART SM01011 1 137 8.2E-37 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 MC28_1077 6e281c1d8da7716e477af8fab465ae48 427 SUPERFAMILY SSF53092 2 172 4.29E-37 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MC28_1077 6e281c1d8da7716e477af8fab465ae48 427 Pfam PF00557 Metallopeptidase family M24 179 391 1.9E-54 T 14-10-2018 IPR000994 Peptidase M24 MC28_1077 6e281c1d8da7716e477af8fab465ae48 427 SUPERFAMILY SSF55920 173 415 4.32E-66 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like MC28_1077 6e281c1d8da7716e477af8fab465ae48 427 Gene3D G3DSA:3.40.350.10 1 171 7.6E-66 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MC28_1159 770ec216bd9388d569d30c99d2ee136a 260 SUPERFAMILY SSF53474 14 256 1.27E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1159 770ec216bd9388d569d30c99d2ee136a 260 Gene3D G3DSA:3.40.50.1820 6 257 6.2E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1159 770ec216bd9388d569d30c99d2ee136a 260 Pfam PF00561 alpha/beta hydrolase fold 17 130 3.5E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2604 3b631782acd48bbd30e572d594d7cae0 472 ProSitePatterns PS00218 Amino acid permeases signature. 48 78 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 MC28_2604 3b631782acd48bbd30e572d594d7cae0 472 PIRSF PIRSF006060 7 470 4.4E-69 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_2604 3b631782acd48bbd30e572d594d7cae0 472 Pfam PF00324 Amino acid permease 23 433 2.4E-102 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_2604 3b631782acd48bbd30e572d594d7cae0 472 Gene3D G3DSA:1.20.1740.10 14 467 5.2E-61 T 14-10-2018 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.959 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.9E-40 T 14-10-2018 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.9E-40 T 14-10-2018 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.9E-40 T 14-10-2018 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.9E-40 T 14-10-2018 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 SMART SM00881 4 100 7.5E-37 T 14-10-2018 IPR003781 CoA-binding GO:0048037 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 SUPERFAMILY SSF52210 123 287 9.68E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 Pfam PF00549 CoA-ligase 151 268 4.6E-18 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 Gene3D G3DSA:3.40.50.261 124 289 8.4E-72 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 1.2E-147 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 SUPERFAMILY SSF51735 1 122 5.91E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 PIRSF PIRSF001553 1 291 4.2E-134 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 Pfam PF02629 CoA binding domain 6 99 2.5E-32 T 14-10-2018 IPR003781 CoA-binding GO:0048037 MC28_3058 c1da3701fdf9b7bd493fe83814b3b17c 300 Gene3D G3DSA:3.40.50.720 1 123 1.8E-52 T 14-10-2018 MC28_3882 ef921bb3fad867308722924253b8476d 1108 SUPERFAMILY SSF89550 2 254 9.42E-17 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 MC28_3882 ef921bb3fad867308722924253b8476d 1108 Pfam PF14579 Helix-hairpin-helix motif 778 865 2.7E-18 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3882 ef921bb3fad867308722924253b8476d 1108 Pfam PF01336 OB-fold nucleic acid binding domain 956 1021 1.5E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 MC28_3882 ef921bb3fad867308722924253b8476d 1108 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 983 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3882 ef921bb3fad867308722924253b8476d 1108 Gene3D G3DSA:3.20.20.140 1 261 1.1E-84 T 14-10-2018 MC28_3882 ef921bb3fad867308722924253b8476d 1108 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 705 6.3E-174 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_3882 ef921bb3fad867308722924253b8476d 1108 SMART SM00481 4 71 7.0E-22 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal MC28_3882 ef921bb3fad867308722924253b8476d 1108 Pfam PF02811 PHP domain 5 164 1.1E-36 T 14-10-2018 IPR004013 PHP domain GO:0003824 MC28_3882 ef921bb3fad867308722924253b8476d 1108 Gene3D G3DSA:1.10.10.1600 415 491 5.8E-23 T 14-10-2018 MC28_3882 ef921bb3fad867308722924253b8476d 1108 Gene3D G3DSA:1.10.150.870 753 849 1.4E-5 T 14-10-2018 MC28_0970 ca93074bfa701641c1a42c8c9b60a965 138 SUPERFAMILY SSF46785 18 130 3.44E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0970 ca93074bfa701641c1a42c8c9b60a965 138 PIRSF PIRSF019455 12 138 5.3E-21 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 MC28_0970 ca93074bfa701641c1a42c8c9b60a965 138 Pfam PF03965 Penicillinase repressor 18 131 1.2E-26 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 MC28_0970 ca93074bfa701641c1a42c8c9b60a965 138 Gene3D G3DSA:1.10.10.10 14 81 4.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2163 b9aafaa7d6a0dbd5703f5c55085acc65 493 ProSitePatterns PS00211 ABC transporters family signature. 392 406 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2163 b9aafaa7d6a0dbd5703f5c55085acc65 493 SUPERFAMILY SSF52540 256 476 3.1E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2163 b9aafaa7d6a0dbd5703f5c55085acc65 493 Gene3D G3DSA:3.40.50.300 2 229 3.1E-57 T 14-10-2018 MC28_2163 b9aafaa7d6a0dbd5703f5c55085acc65 493 SUPERFAMILY SSF52540 5 223 1.03E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2163 b9aafaa7d6a0dbd5703f5c55085acc65 493 SMART SM00382 31 219 9.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2163 b9aafaa7d6a0dbd5703f5c55085acc65 493 SMART SM00382 275 458 1.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2163 b9aafaa7d6a0dbd5703f5c55085acc65 493 Gene3D G3DSA:3.40.50.300 236 485 1.1E-46 T 14-10-2018 MC28_2163 b9aafaa7d6a0dbd5703f5c55085acc65 493 Pfam PF00005 ABC transporter 267 419 2.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2163 b9aafaa7d6a0dbd5703f5c55085acc65 493 Pfam PF00005 ABC transporter 22 165 5.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 SMART SM00387 295 402 1.5E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 193 248 1.2E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 Gene3D G3DSA:1.10.287.130 194 249 6.1E-10 T 14-10-2018 MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 380 3.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 3.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 361 3.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 399 3.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 SUPERFAMILY SSF47384 181 248 6.08E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 SUPERFAMILY SSF55874 253 400 1.31E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 Gene3D G3DSA:3.30.565.10 255 406 2.4E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 400 2.0E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4062 a086f399819fe2a051bef19c9e64ec9e 417 SMART SM00388 191 253 0.0043 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_D136 9e9e79c1da1f15c439370dea224ab87b 142 Pfam PF17633 Family of unknown function (DUF5514) 2 142 5.1E-76 T 14-10-2018 IPR035115 Protein of unknown function DUF5514 MC28_D136 9e9e79c1da1f15c439370dea224ab87b 142 ProDom PD299256 PLASMID PXO2-83/BXB0113/GBAA_PXO2_0113 1 142 5.0E-70 T 14-10-2018 IPR035115 Protein of unknown function DUF5514 MC28_0776 81a368666179004965addbfa8a84ec1e 934 Gene3D G3DSA:3.40.50.300 719 923 8.8E-44 T 14-10-2018 MC28_0776 81a368666179004965addbfa8a84ec1e 934 Pfam PF13307 Helicase C-terminal domain 748 913 3.5E-41 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 MC28_0776 81a368666179004965addbfa8a84ec1e 934 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 1 932 28.054 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 MC28_0776 81a368666179004965addbfa8a84ec1e 934 Gene3D G3DSA:3.40.50.300 257 520 4.4E-45 T 14-10-2018 MC28_0776 81a368666179004965addbfa8a84ec1e 934 SUPERFAMILY SSF52540 273 894 4.48E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0776 81a368666179004965addbfa8a84ec1e 934 Pfam PF04851 Type III restriction enzyme, res subunit 257 482 2.1E-6 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 MC28_0776 81a368666179004965addbfa8a84ec1e 934 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 168 9.0E-27 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_0776 81a368666179004965addbfa8a84ec1e 934 SMART SM00487 255 523 0.0059 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_0776 81a368666179004965addbfa8a84ec1e 934 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 4 929 2.2E-265 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 MC28_0776 81a368666179004965addbfa8a84ec1e 934 SUPERFAMILY SSF53098 4 271 1.64E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_0776 81a368666179004965addbfa8a84ec1e 934 SMART SM00479 4 172 6.4E-47 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III MC28_0776 81a368666179004965addbfa8a84ec1e 934 Pfam PF00929 Exonuclease 6 163 2.7E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III MC28_0776 81a368666179004965addbfa8a84ec1e 934 Gene3D G3DSA:3.30.420.10 1 172 1.5E-49 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_0776 81a368666179004965addbfa8a84ec1e 934 SMART SM00491 766 900 2.3E-31 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 MC28_3549 47962ff5086c9ba00ea3d9b76d388f96 387 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 378 1.8E-144 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3549 47962ff5086c9ba00ea3d9b76d388f96 387 PIRSF PIRSF001434 2 382 1.6E-140 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3549 47962ff5086c9ba00ea3d9b76d388f96 387 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3549 47962ff5086c9ba00ea3d9b76d388f96 387 SUPERFAMILY SSF53383 20 379 1.36E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3549 47962ff5086c9ba00ea3d9b76d388f96 387 Gene3D G3DSA:3.40.640.10 4 246 5.2E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3549 47962ff5086c9ba00ea3d9b76d388f96 387 Gene3D G3DSA:3.90.1150.10 247 381 4.6E-43 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2957 ea82f25f0ec9b352e2ccdae6133daeaa 428 Gene3D G3DSA:3.30.830.10 238 426 2.2E-46 T 14-10-2018 MC28_2957 ea82f25f0ec9b352e2ccdae6133daeaa 428 SUPERFAMILY SSF63411 242 426 5.06E-20 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MC28_2957 ea82f25f0ec9b352e2ccdae6133daeaa 428 Gene3D G3DSA:3.30.830.10 7 237 6.7E-62 T 14-10-2018 MC28_2957 ea82f25f0ec9b352e2ccdae6133daeaa 428 Pfam PF05193 Peptidase M16 inactive domain 181 361 5.7E-19 T 14-10-2018 IPR007863 Peptidase M16, C-terminal MC28_2957 ea82f25f0ec9b352e2ccdae6133daeaa 428 Pfam PF00675 Insulinase (Peptidase family M16) 64 150 5.8E-16 T 14-10-2018 IPR011765 Peptidase M16, N-terminal MC28_2957 ea82f25f0ec9b352e2ccdae6133daeaa 428 SUPERFAMILY SSF63411 13 219 2.62E-42 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 SUPERFAMILY SSF82693 7 98 2.17E-16 T 14-10-2018 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 SUPERFAMILY SSF82714 654 736 3.66E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 Gene3D G3DSA:1.20.1640.10 2 458 7.1E-249 T 14-10-2018 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 PRINTS PR00702 Acriflavin resistance protein family signature 344 368 1.6E-34 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 PRINTS PR00702 Acriflavin resistance protein family signature 422 445 1.6E-34 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 PRINTS PR00702 Acriflavin resistance protein family signature 289 312 1.6E-34 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 PRINTS PR00702 Acriflavin resistance protein family signature 397 420 1.6E-34 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 PRINTS PR00702 Acriflavin resistance protein family signature 5 23 1.6E-34 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 PRINTS PR00702 Acriflavin resistance protein family signature 316 337 1.6E-34 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 SUPERFAMILY SSF82866 743 961 1.96E-47 T 14-10-2018 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 Gene3D G3DSA:3.30.70.1320 99 285 7.1E-249 T 14-10-2018 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 Gene3D G3DSA:3.30.70.1430 505 602 7.1E-249 T 14-10-2018 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 Pfam PF00873 AcrB/AcrD/AcrF family 3 958 3.6E-198 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 SUPERFAMILY SSF82714 149 225 2.75E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 Gene3D G3DSA:3.30.70.1430 7 748 7.1E-249 T 14-10-2018 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 Gene3D G3DSA:3.30.70.1440 603 797 7.1E-249 T 14-10-2018 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 SUPERFAMILY SSF82693 122 273 1.15E-10 T 14-10-2018 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 Gene3D G3DSA:3.30.2090.10 143 228 7.1E-249 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 SUPERFAMILY SSF82866 251 449 1.27E-37 T 14-10-2018 MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 Gene3D G3DSA:3.30.2090.10 652 740 7.1E-249 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MC28_5444 499264cb56676e939d64f6a6ae7b7514 980 Gene3D G3DSA:1.20.1640.10 459 955 7.1E-249 T 14-10-2018 MC28_2461 272069402b02f3060e6ff92480cb178a 232 Gene3D G3DSA:3.40.109.10 13 232 4.4E-61 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_2461 272069402b02f3060e6ff92480cb178a 232 SUPERFAMILY SSF55469 18 231 1.7E-55 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_2461 272069402b02f3060e6ff92480cb178a 232 Pfam PF00881 Nitroreductase family 24 211 8.2E-27 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_1695 6ed7c9720564493e73e9c5283722076a 393 SUPERFAMILY SSF55909 50 389 9.1E-98 T 14-10-2018 MC28_1695 6ed7c9720564493e73e9c5283722076a 393 Gene3D G3DSA:3.75.10.10 42 393 2.5E-101 T 14-10-2018 MC28_1695 6ed7c9720564493e73e9c5283722076a 393 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 57 389 7.8E-89 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 MC28_0928 9e03999f64a5d25eefe63c0e0706993f 422 Gene3D G3DSA:1.20.1250.20 13 410 1.7E-42 T 14-10-2018 MC28_0928 9e03999f64a5d25eefe63c0e0706993f 422 SUPERFAMILY SSF103473 18 410 9.55E-46 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0928 9e03999f64a5d25eefe63c0e0706993f 422 Pfam PF07690 Major Facilitator Superfamily 24 365 3.9E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 434 518 4.8E-20 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 559 682 3.7E-53 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 Pfam PF02378 Phosphotransferase system, EIIC 32 374 4.5E-100 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 472 489 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 SUPERFAMILY SSF51261 552 702 4.01E-57 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 Gene3D G3DSA:2.70.70.10 546 706 1.7E-64 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 21 534 6.4E-270 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 560 680 4.0E-48 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 83 385 1.2E-87 T 14-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 SUPERFAMILY SSF55604 461 532 6.67E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 Pfam PF00367 phosphotransferase system, EIIB 461 494 3.5E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 Gene3D G3DSA:3.30.1360.60 455 535 7.2E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_3342 be483698a76b3d0a1e6f5ae7de1529f7 706 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 622 634 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 MC28_0784 7509545885fa0b1a61c1005c20cb6026 169 TIGRFAM TIGR00648 recU: recombination protein U 1 165 3.4E-74 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 MC28_0784 7509545885fa0b1a61c1005c20cb6026 169 Gene3D G3DSA:3.40.1350.10 2 169 1.8E-67 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 MC28_0784 7509545885fa0b1a61c1005c20cb6026 169 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 169 90.8 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 MC28_0784 7509545885fa0b1a61c1005c20cb6026 169 Pfam PF03838 Recombination protein U 1 164 5.9E-65 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 MC28_0784 7509545885fa0b1a61c1005c20cb6026 169 PIRSF PIRSF037785 1 169 2.1E-71 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 MC28_0784 7509545885fa0b1a61c1005c20cb6026 169 SUPERFAMILY SSF52980 1 167 1.13E-66 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 Pfam PF13541 Subunit ChlI of Mg-chelatase 363 430 9.1E-9 T 14-10-2018 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 1.8E-211 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 Gene3D G3DSA:3.40.50.300 64 283 4.7E-44 T 14-10-2018 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 45.323 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 Pfam PF13481 AAA domain 60 222 1.5E-17 T 14-10-2018 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 SUPERFAMILY SSF52540 68 293 3.27E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 SMART SM00382 90 244 1.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 Gene3D G3DSA:3.30.230.10 284 457 7.9E-21 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 SUPERFAMILY SSF54211 255 456 1.33E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 PRINTS PR01874 DNA repair protein radA signature 322 345 6.2E-94 T 14-10-2018 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 PRINTS PR01874 DNA repair protein radA signature 82 110 6.2E-94 T 14-10-2018 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 PRINTS PR01874 DNA repair protein radA signature 213 241 6.2E-94 T 14-10-2018 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 PRINTS PR01874 DNA repair protein radA signature 248 274 6.2E-94 T 14-10-2018 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 PRINTS PR01874 DNA repair protein radA signature 10 34 6.2E-94 T 14-10-2018 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 PRINTS PR01874 DNA repair protein radA signature 124 141 6.2E-94 T 14-10-2018 MC28_4795 585b61d92ad2bfed0a39aff93ac76882 458 PRINTS PR01874 DNA repair protein radA signature 174 198 6.2E-94 T 14-10-2018 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 Gene3D G3DSA:1.10.8.500 302 354 3.5E-12 T 14-10-2018 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 Pfam PF00672 HAMP domain 304 351 2.3E-16 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 Pfam PF02743 Cache domain 48 264 6.6E-30 T 14-10-2018 IPR033479 Double Cache domain 1 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 SUPERFAMILY SSF103190 91 191 9.02E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 Gene3D G3DSA:3.30.450.20 64 273 8.8E-39 T 14-10-2018 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 SMART SM00304 579 656 62.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 SMART SM00304 303 355 7.7E-17 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 SUPERFAMILY SSF58104 323 659 1.31E-76 T 14-10-2018 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 SMART SM00283 363 659 4.0E-77 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 Gene3D G3DSA:3.30.450.20 76 183 8.8E-39 T 14-10-2018 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 Gene3D G3DSA:1.10.287.950 364 659 1.1E-69 T 14-10-2018 MC28_1231 aba4de9c8029fd4d5d04f0b2bfebf4d5 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 610 2.0E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_3547 7f46436ef39cbd38b1bbb996173cf8db 610 Pfam PF02219 Methylenetetrahydrofolate reductase 316 575 3.9E-31 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 MC28_3547 7f46436ef39cbd38b1bbb996173cf8db 610 Pfam PF02574 Homocysteine S-methyltransferase 12 281 9.3E-50 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 MC28_3547 7f46436ef39cbd38b1bbb996173cf8db 610 Gene3D G3DSA:3.20.20.330 1 293 2.4E-82 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 MC28_3547 7f46436ef39cbd38b1bbb996173cf8db 610 SUPERFAMILY SSF82282 3 360 2.09E-93 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 MC28_3547 7f46436ef39cbd38b1bbb996173cf8db 610 SUPERFAMILY SSF51730 316 600 2.35E-71 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like MC28_3547 7f46436ef39cbd38b1bbb996173cf8db 610 Gene3D G3DSA:3.20.20.220 309 598 5.9E-57 T 14-10-2018 MC28_0527 7d715c9ddc71d16868729528b365661c 374 Pfam PF05651 Putative sugar diacid recognition 8 138 6.8E-49 T 14-10-2018 IPR008599 Putative sugar diacid recognition MC28_0527 7d715c9ddc71d16868729528b365661c 374 Gene3D G3DSA:1.10.10.2840 245 365 3.1E-21 T 14-10-2018 MC28_0527 7d715c9ddc71d16868729528b365661c 374 Pfam PF13556 PucR C-terminal helix-turn-helix domain 304 361 1.0E-19 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 Pfam PF01551 Peptidase family M23 277 374 2.4E-28 T 14-10-2018 IPR016047 Peptidase M23 MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 Pfam PF08239 Bacterial SH3 domain 189 237 1.5E-13 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 Pfam PF08239 Bacterial SH3 domain 48 94 1.8E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 Pfam PF08239 Bacterial SH3 domain 114 164 3.2E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 Gene3D G3DSA:2.70.70.10 235 386 2.3E-36 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 Gene3D G3DSA:2.30.30.500 46 110 1.5E-15 T 14-10-2018 MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 Gene3D G3DSA:2.30.30.40 179 234 1.9E-17 T 14-10-2018 MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 Gene3D G3DSA:2.30.30.40 111 163 1.6E-17 T 14-10-2018 MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 SUPERFAMILY SSF51261 235 384 1.1E-39 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 SMART SM00287 104 167 3.3E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 SMART SM00287 38 100 0.024 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0004 67908f6ad73b0caca1c08e72a286c7f1 386 SMART SM00287 179 241 1.4E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 Pfam PF12833 Helix-turn-helix domain 28 107 1.8E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 SUPERFAMILY SSF46689 7 56 8.96E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 SMART SM00871 133 298 4.5E-39 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 SUPERFAMILY SSF46689 58 115 1.48E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 Pfam PF14526 Integron-associated effector binding protein 136 297 1.0E-30 T 14-10-2018 IPR029441 Integron-associated effector binding protein MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 SUPERFAMILY SSF55136 133 300 6.8E-31 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 Gene3D G3DSA:1.10.10.60 59 113 3.2E-20 T 14-10-2018 MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 SMART SM00342 22 105 4.2E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 8.2E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 8.2E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 Gene3D G3DSA:3.20.80.10 133 300 4.4E-45 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_0335 0b163496da10f36edcaa9b3ba80ad385 300 Gene3D G3DSA:1.10.10.60 1 58 4.4E-14 T 14-10-2018 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 Gene3D G3DSA:3.40.50.1000 6 185 6.2E-53 T 14-10-2018 IPR023214 HAD superfamily MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 179 4.6E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 SUPERFAMILY SSF56784 1 213 7.88E-59 T 14-10-2018 IPR036412 HAD-like superfamily MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 54 175 7.3E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 1 214 47.942 T 14-10-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 181 2.5E-57 T 14-10-2018 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 73 181 8.1E-14 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 Gene3D G3DSA:1.10.150.240 18 80 6.2E-53 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 2.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 94 107 2.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_4395 103d0cb8d5946aef6f50f69800e015d5 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 2.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_3607 af8db5d580f09e31ba439e8e58b1a07e 338 PIRSF PIRSF005485 1 338 1.5E-124 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 MC28_3607 af8db5d580f09e31ba439e8e58b1a07e 338 Pfam PF01628 HrcA protein C terminal domain 104 322 4.2E-63 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 MC28_3607 af8db5d580f09e31ba439e8e58b1a07e 338 SUPERFAMILY SSF55781 71 336 1.96E-67 T 14-10-2018 MC28_3607 af8db5d580f09e31ba439e8e58b1a07e 338 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 332 9.8E-114 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 MC28_3607 af8db5d580f09e31ba439e8e58b1a07e 338 SUPERFAMILY SSF46785 1 82 1.98E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3607 af8db5d580f09e31ba439e8e58b1a07e 338 Gene3D G3DSA:3.30.390.60 128 229 1.0E-58 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily MC28_3607 af8db5d580f09e31ba439e8e58b1a07e 338 Gene3D G3DSA:1.10.10.10 1 84 3.5E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3607 af8db5d580f09e31ba439e8e58b1a07e 338 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 329 32.789 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 MC28_3607 af8db5d580f09e31ba439e8e58b1a07e 338 Gene3D G3DSA:3.30.450.40 104 333 1.0E-58 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_4639 9c4501e2b458be0e01fe3c9f83e884fe 432 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 8 422 2.9E-181 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 MC28_4639 9c4501e2b458be0e01fe3c9f83e884fe 432 Gene3D G3DSA:3.90.1150.10 291 431 6.7E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_4639 9c4501e2b458be0e01fe3c9f83e884fe 432 PIRSF PIRSF001434 3 424 1.7E-122 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_4639 9c4501e2b458be0e01fe3c9f83e884fe 432 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 422 7.1E-126 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_4639 9c4501e2b458be0e01fe3c9f83e884fe 432 Gene3D G3DSA:3.40.640.10 7 287 1.5E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_4639 9c4501e2b458be0e01fe3c9f83e884fe 432 SUPERFAMILY SSF53383 24 422 3.52E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 231 3.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 248 268 3.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 132 3.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 212 3.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 183 3.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 46 63 3.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 Gene3D G3DSA:3.40.50.720 2 284 2.1E-86 T 14-10-2018 MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 132 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 193 212 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 181 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 54 284 3.4E-59 T 14-10-2018 MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 180 208 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_0031 5ebf20f871351c69df13df60e5e210b4 288 SUPERFAMILY SSF51735 43 286 5.83E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3612 e763db890d779ba6d32b18039e5a29cc 374 Pfam PF03418 Germination protease 24 373 4.2E-195 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 MC28_3612 e763db890d779ba6d32b18039e5a29cc 374 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 17 374 0.0 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 MC28_3612 e763db890d779ba6d32b18039e5a29cc 374 Gene3D G3DSA:3.40.50.1450 8 308 8.2E-113 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily MC28_3612 e763db890d779ba6d32b18039e5a29cc 374 Hamap MF_00626 Germination protease [gpr]. 1 374 165.672 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 MC28_3612 e763db890d779ba6d32b18039e5a29cc 374 TIGRFAM TIGR01441 GPR: GPR endopeptidase 17 374 1.2E-185 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 MC28_3612 e763db890d779ba6d32b18039e5a29cc 374 SUPERFAMILY SSF53163 10 374 6.15E-132 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily MC28_3612 e763db890d779ba6d32b18039e5a29cc 374 PIRSF PIRSF019549 10 374 1.5E-190 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 MC28_3772 e5f2e2656570a047062c85a5e4a0efd0 258 Pfam PF01138 3' exoribonuclease family, domain 1 23 152 4.8E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3772 e5f2e2656570a047062c85a5e4a0efd0 258 ProSitePatterns PS01277 Ribonuclease PH signature. 129 141 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site MC28_3772 e5f2e2656570a047062c85a5e4a0efd0 258 SUPERFAMILY SSF55666 164 251 5.11E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3772 e5f2e2656570a047062c85a5e4a0efd0 258 SUPERFAMILY SSF54211 14 153 1.77E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_3772 e5f2e2656570a047062c85a5e4a0efd0 258 Gene3D G3DSA:3.30.230.70 26 258 1.7E-65 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3772 e5f2e2656570a047062c85a5e4a0efd0 258 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 15 250 5.6E-117 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 MC28_3772 e5f2e2656570a047062c85a5e4a0efd0 258 Hamap MF_00564 Ribonuclease PH [rph]. 24 251 43.917 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 MC28_3772 e5f2e2656570a047062c85a5e4a0efd0 258 Pfam PF03725 3' exoribonuclease family, domain 2 172 237 3.5E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 SMART SM00535 34 169 6.8E-58 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 ProSitePatterns PS00517 Ribonuclease III family signature. 58 66 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 22 241 1.5E-81 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 SUPERFAMILY SSF69065 15 177 9.42E-54 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 Pfam PF14622 Ribonuclease-III-like 32 159 8.1E-38 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 Gene3D G3DSA:3.30.160.20 173 244 4.2E-23 T 14-10-2018 MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 Pfam PF00035 Double-stranded RNA binding motif 175 241 1.6E-17 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 Gene3D G3DSA:1.10.1520.10 15 168 1.3E-49 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 SMART SM00358 175 242 4.1E-22 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 Hamap MF_00104 Ribonuclease 3 [rnc]. 22 238 31.98 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 MC28_3072 69377e21fc9e34d9f1b901e8f49ae6f8 245 SUPERFAMILY SSF54768 131 241 2.99E-24 T 14-10-2018 MC28_3736 65e6247d9676c5236b8a8603944bdd40 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3736 65e6247d9676c5236b8a8603944bdd40 102 SUPERFAMILY SSF141091 1 101 9.94E-39 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3736 65e6247d9676c5236b8a8603944bdd40 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 7.4E-40 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3736 65e6247d9676c5236b8a8603944bdd40 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 2.6E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3736 65e6247d9676c5236b8a8603944bdd40 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 27.476 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 1 60 2.3E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 Gene3D G3DSA:3.40.1410.10 69 226 5.1E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 50 2.9E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 20 34 2.9E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 SMART SM00866 82 220 1.2E-24 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 SUPERFAMILY SSF64288 50 226 1.73E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 Pfam PF07702 UTRA domain 83 219 1.2E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 SMART SM00345 1 60 4.3E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 Gene3D G3DSA:1.10.10.10 1 68 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2963 defd49240e3a3578fd7dfc7e4b0b7042 228 SUPERFAMILY SSF46785 1 71 2.27E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2940 d8c73fb1bc3ce1767cd5f99c2aabd81c 143 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 113 5.0E-25 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA MC28_2940 d8c73fb1bc3ce1767cd5f99c2aabd81c 143 SUPERFAMILY SSF158622 4 123 7.33E-37 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily MC28_2940 d8c73fb1bc3ce1767cd5f99c2aabd81c 143 Gene3D G3DSA:1.20.1500.10 1 124 3.1E-38 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily MC28_2940 d8c73fb1bc3ce1767cd5f99c2aabd81c 143 PIRSF PIRSF021287 1 123 1.0E-52 T 14-10-2018 IPR016783 Biofilm formation YmcA MC28_2383 8f25c3c7309c40ed04dbebaa46b03898 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 1.3E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2383 8f25c3c7309c40ed04dbebaa46b03898 225 Gene3D G3DSA:1.10.10.10 128 225 2.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2383 8f25c3c7309c40ed04dbebaa46b03898 225 SMART SM00448 4 114 4.5E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2383 8f25c3c7309c40ed04dbebaa46b03898 225 SUPERFAMILY SSF52172 1 169 4.68E-39 T 14-10-2018 IPR011006 CheY-like superfamily MC28_2383 8f25c3c7309c40ed04dbebaa46b03898 225 Pfam PF00072 Response regulator receiver domain 6 111 9.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2383 8f25c3c7309c40ed04dbebaa46b03898 225 SMART SM00862 147 222 3.4E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2383 8f25c3c7309c40ed04dbebaa46b03898 225 Gene3D G3DSA:3.40.50.2300 1 127 2.6E-34 T 14-10-2018 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 SUPERFAMILY SSF63520 181 277 9.42E-25 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 Gene3D G3DSA:1.20.890.100 170 224 3.6E-21 T 14-10-2018 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 Gene3D G3DSA:2.30.24.10 1 70 6.6E-26 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 Pfam PF00874 PRD domain 80 166 6.5E-25 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 Pfam PF00874 PRD domain 185 275 1.3E-21 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 Gene3D G3DSA:1.10.1790.10 71 169 2.2E-32 T 14-10-2018 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 Pfam PF03123 CAT RNA binding domain 6 60 8.4E-24 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 SUPERFAMILY SSF50151 6 57 3.53E-17 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 SMART SM01061 5 63 1.0E-27 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 SUPERFAMILY SSF63520 60 171 1.57E-31 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_3343 3147b94ca984dee389d1444aca46ba53 282 Gene3D G3DSA:1.20.58.1950 226 277 3.9E-24 T 14-10-2018 MC28_1057 8e0f8c30d2adaffcc91a7268ece4b7b7 314 Gene3D G3DSA:1.10.1040.10 177 301 3.0E-30 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_1057 8e0f8c30d2adaffcc91a7268ece4b7b7 314 SUPERFAMILY SSF48179 177 301 8.16E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_1057 8e0f8c30d2adaffcc91a7268ece4b7b7 314 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 6.0E-37 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain MC28_1057 8e0f8c30d2adaffcc91a7268ece4b7b7 314 Gene3D G3DSA:3.40.50.720 1 172 8.3E-52 T 14-10-2018 MC28_1057 8e0f8c30d2adaffcc91a7268ece4b7b7 314 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 302 1.3E-71 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 MC28_1057 8e0f8c30d2adaffcc91a7268ece4b7b7 314 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 177 300 7.8E-25 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain MC28_1057 8e0f8c30d2adaffcc91a7268ece4b7b7 314 SUPERFAMILY SSF51735 1 129 1.24E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 185 196 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 PIRSF PIRSF000732 1 570 6.5E-226 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 SUPERFAMILY SSF47831 25 144 1.12E-37 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 SUPERFAMILY SSF52009 126 247 3.66E-38 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 542 6.8E-126 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 568 4.3E-255 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 Pfam PF00391 PEP-utilising enzyme, mobile domain 154 226 9.6E-24 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 SUPERFAMILY SSF51621 250 551 6.81E-112 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 Gene3D G3DSA:3.20.20.60 235 570 4.3E-126 T 14-10-2018 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 294 313 3.3E-32 T 14-10-2018 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 3.3E-32 T 14-10-2018 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 481 3.3E-32 T 14-10-2018 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 502 514 3.3E-32 T 14-10-2018 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 127 8.5E-34 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 Gene3D G3DSA:1.10.274.10 24 147 4.9E-82 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 Gene3D G3DSA:3.50.30.10 7 234 4.9E-82 T 14-10-2018 MC28_3340 1cc515b8a1972de2d48adf0e4f302293 570 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 449 467 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 MC28_2603 e8902660733ef493884faf7b0b78abb4 349 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 12 349 3.3E-139 T 14-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 MC28_2603 e8902660733ef493884faf7b0b78abb4 349 SUPERFAMILY SSF51735 127 298 2.34E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2603 e8902660733ef493884faf7b0b78abb4 349 SMART SM00829 15 346 1.2E-10 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_2603 e8902660733ef493884faf7b0b78abb4 349 Pfam PF13602 Zinc-binding dehydrogenase 206 346 2.3E-19 T 14-10-2018 MC28_2603 e8902660733ef493884faf7b0b78abb4 349 Gene3D G3DSA:3.90.180.10 36 345 2.7E-106 T 14-10-2018 MC28_2603 e8902660733ef493884faf7b0b78abb4 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 42 103 4.4E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_2603 e8902660733ef493884faf7b0b78abb4 349 Gene3D G3DSA:3.40.50.720 138 287 2.7E-106 T 14-10-2018 MC28_2603 e8902660733ef493884faf7b0b78abb4 349 SUPERFAMILY SSF50129 11 149 1.4E-28 T 14-10-2018 IPR011032 GroES-like superfamily MC28_G184 932d9f59e2237aa5ce2a2202be884d92 65 Pfam PF09388 Spo0E like sporulation regulatory protein 6 46 3.5E-14 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 MC28_G184 932d9f59e2237aa5ce2a2202be884d92 65 SUPERFAMILY SSF140500 4 53 1.44E-13 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_G184 932d9f59e2237aa5ce2a2202be884d92 65 Gene3D G3DSA:1.20.58.990 1 64 1.3E-21 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_1172 282faa748bc3f42d738500afbfe7124a 352 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 9.5E-80 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_1172 282faa748bc3f42d738500afbfe7124a 352 SUPERFAMILY SSF53686 6 349 1.57E-105 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_1172 282faa748bc3f42d738500afbfe7124a 352 Gene3D G3DSA:3.40.50.1100 12 322 4.9E-122 T 14-10-2018 MC28_1172 282faa748bc3f42d738500afbfe7124a 352 TIGRFAM TIGR00260 thrC: threonine synthase 8 322 1.4E-100 T 14-10-2018 IPR004450 Threonine synthase-like MC28_1172 282faa748bc3f42d738500afbfe7124a 352 Gene3D G3DSA:3.40.50.1100 58 154 4.9E-122 T 14-10-2018 MC28_1172 282faa748bc3f42d738500afbfe7124a 352 PIRSF PIRSF038945 1 348 6.5E-155 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 MC28_1172 282faa748bc3f42d738500afbfe7124a 352 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 50 63 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 MC28_4454 52487bac805d821f0c95fc94c0399aff 666 Pfam PF12698 ABC-2 family transporter protein 458 651 8.3E-8 T 14-10-2018 MC28_4454 52487bac805d821f0c95fc94c0399aff 666 Pfam PF12698 ABC-2 family transporter protein 24 165 2.0E-12 T 14-10-2018 MC28_4454 52487bac805d821f0c95fc94c0399aff 666 SUPERFAMILY SSF101967 175 287 7.72E-5 T 14-10-2018 MC28_4454 52487bac805d821f0c95fc94c0399aff 666 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 454 657 4.0E-61 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal MC28_4454 52487bac805d821f0c95fc94c0399aff 666 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 415 440 3.3E-4 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_4454 52487bac805d821f0c95fc94c0399aff 666 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 204 229 2.1E-6 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_4454 52487bac805d821f0c95fc94c0399aff 666 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 260 286 1.7E-5 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_4454 52487bac805d821f0c95fc94c0399aff 666 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 10 172 4.3E-67 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 PIRSF PIRSF000381 1 1132 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Pfam PF00809 Pterin binding enzyme 334 567 3.2E-40 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 890 1131 1.4E-51 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 SUPERFAMILY SSF47644 617 700 1.14E-23 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 SUPERFAMILY SSF51717 331 596 6.8E-80 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 SUPERFAMILY SSF82282 2 373 3.01E-111 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 SUPERFAMILY SSF52242 702 846 3.79E-39 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Pfam PF02607 B12 binding domain 621 694 4.7E-22 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 SUPERFAMILY SSF56507 866 1131 1.15E-83 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 TIGRFAM TIGR02082 metH: methionine synthase 8 1131 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Gene3D G3DSA:3.20.20.330 1 314 6.1E-111 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Pfam PF02574 Homocysteine S-methyltransferase 13 300 2.0E-77 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Gene3D G3DSA:3.40.50.280 703 853 4.0E-47 T 14-10-2018 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 SMART SM01018 618 701 8.8E-38 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Gene3D G3DSA:3.20.20.20 315 608 6.6E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Gene3D G3DSA:3.10.196.10 873 1131 6.9E-58 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Gene3D G3DSA:1.10.1240.10 609 701 9.9E-21 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Pfam PF02310 B12 binding domain 707 796 2.9E-21 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 MC28_3546 43526b4d9d3f8e84106c75646818c636 1132 Gene3D G3DSA:1.10.288.10 885 941 6.9E-58 T 14-10-2018 MC28_1036 bb72e7983a7d3699bdbcb5fd339d57ec 420 SUPERFAMILY SSF55021 337 415 6.87E-11 T 14-10-2018 MC28_1036 bb72e7983a7d3699bdbcb5fd339d57ec 420 SUPERFAMILY SSF53686 11 362 6.02E-103 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_1036 bb72e7983a7d3699bdbcb5fd339d57ec 420 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 418 7.5E-27 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 MC28_1036 bb72e7983a7d3699bdbcb5fd339d57ec 420 TIGRFAM TIGR02079 THD1: threonine dehydratase 13 420 9.4E-195 T 14-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 MC28_1036 bb72e7983a7d3699bdbcb5fd339d57ec 420 Gene3D G3DSA:3.40.1020.10 316 420 2.2E-10 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 MC28_1036 bb72e7983a7d3699bdbcb5fd339d57ec 420 Gene3D G3DSA:3.40.50.1100 15 315 2.2E-110 T 14-10-2018 MC28_1036 bb72e7983a7d3699bdbcb5fd339d57ec 420 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 314 1.5E-76 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_1036 bb72e7983a7d3699bdbcb5fd339d57ec 420 Gene3D G3DSA:3.40.50.1100 57 156 2.2E-110 T 14-10-2018 MC28_3094 a118f923a5c773a91de71cf6dc776fd0 205 Hamap MF_00328 Guanylate kinase [gmk]. 4 188 37.114 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 MC28_3094 a118f923a5c773a91de71cf6dc776fd0 205 Pfam PF00625 Guanylate kinase 8 184 2.7E-53 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit MC28_3094 a118f923a5c773a91de71cf6dc776fd0 205 Gene3D G3DSA:3.40.50.300 10 184 2.1E-68 T 14-10-2018 MC28_3094 a118f923a5c773a91de71cf6dc776fd0 205 SMART SM00072 5 188 1.8E-79 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit MC28_3094 a118f923a5c773a91de71cf6dc776fd0 205 Gene3D G3DSA:3.30.63.10 38 97 2.1E-68 T 14-10-2018 MC28_3094 a118f923a5c773a91de71cf6dc776fd0 205 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 184 4.8E-74 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 MC28_3094 a118f923a5c773a91de71cf6dc776fd0 205 SUPERFAMILY SSF52540 3 192 9.37E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3094 a118f923a5c773a91de71cf6dc776fd0 205 ProSitePatterns PS00856 Guanylate kinase-like signature. 41 58 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 MC28_2473 72f92779a9da793eff290d4cdda82974 66 Pfam PF01381 Helix-turn-helix 7 61 4.8E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_2473 72f92779a9da793eff290d4cdda82974 66 SMART SM00530 6 61 1.5E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_2473 72f92779a9da793eff290d4cdda82974 66 SUPERFAMILY SSF47413 5 65 2.2E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2473 72f92779a9da793eff290d4cdda82974 66 Gene3D G3DSA:1.10.260.40 3 66 9.6E-27 T 14-10-2018 MC28_1241 68b6edde129b6a66b6af7a37f410bddc 174 Gene3D G3DSA:3.40.630.30 1 165 7.4E-38 T 14-10-2018 MC28_1241 68b6edde129b6a66b6af7a37f410bddc 174 Pfam PF13302 Acetyltransferase (GNAT) domain 24 139 2.9E-24 T 14-10-2018 IPR000182 GNAT domain MC28_1241 68b6edde129b6a66b6af7a37f410bddc 174 SUPERFAMILY SSF55729 4 165 9.76E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4620 da307adea1ec60b14061946319cf9c07 323 Pfam PF01515 Phosphate acetyl/butaryl transferase 5 319 1.5E-128 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 MC28_4620 da307adea1ec60b14061946319cf9c07 323 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 319 1.0E-126 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 MC28_4620 da307adea1ec60b14061946319cf9c07 323 SUPERFAMILY SSF53659 5 322 4.52E-93 T 14-10-2018 MC28_4620 da307adea1ec60b14061946319cf9c07 323 PIRSF PIRSF000428 1 323 2.2E-110 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 MC28_4620 da307adea1ec60b14061946319cf9c07 323 Gene3D G3DSA:3.40.50.10750 142 295 4.2E-134 T 14-10-2018 MC28_4620 da307adea1ec60b14061946319cf9c07 323 Gene3D G3DSA:3.40.50.10950 19 319 4.2E-134 T 14-10-2018 MC28_4706 ecbc57dd5e89d1d007d4e1f060c56cdc 90 ProSitePatterns PS01048 Ribosomal protein S6 signature. 38 47 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 MC28_4706 ecbc57dd5e89d1d007d4e1f060c56cdc 90 SUPERFAMILY SSF54995 1 89 3.01E-31 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4706 ecbc57dd5e89d1d007d4e1f060c56cdc 90 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 89 18.502 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 MC28_4706 ecbc57dd5e89d1d007d4e1f060c56cdc 90 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 88 7.2E-29 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4706 ecbc57dd5e89d1d007d4e1f060c56cdc 90 Gene3D G3DSA:3.30.70.60 1 90 6.8E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 MC28_4706 ecbc57dd5e89d1d007d4e1f060c56cdc 90 Pfam PF01250 Ribosomal protein S6 1 86 1.8E-27 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4565 b4eba77a23107d4b0a2194ac13062619 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 280 2.6E-78 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 MC28_4565 b4eba77a23107d4b0a2194ac13062619 283 SUPERFAMILY SSF53335 3 280 8.51E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4565 b4eba77a23107d4b0a2194ac13062619 283 Pfam PF13847 Methyltransferase domain 114 243 8.7E-16 T 14-10-2018 IPR025714 Methyltransferase domain MC28_4565 b4eba77a23107d4b0a2194ac13062619 283 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 282 43.534 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 MC28_4565 b4eba77a23107d4b0a2194ac13062619 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 MC28_4565 b4eba77a23107d4b0a2194ac13062619 283 Gene3D G3DSA:3.40.50.150 84 283 3.8E-66 T 14-10-2018 MC28_4565 b4eba77a23107d4b0a2194ac13062619 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 278 5.6E-88 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 MC28_4565 b4eba77a23107d4b0a2194ac13062619 283 Gene3D G3DSA:1.10.8.10 1 83 2.6E-17 T 14-10-2018 MC28_0195 28440f31e8d91798c4dc7f71664513cc 113 Pfam PF03551 Transcriptional regulator PadR-like family 12 83 7.3E-15 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_0195 28440f31e8d91798c4dc7f71664513cc 113 Gene3D G3DSA:1.10.10.10 1 111 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0195 28440f31e8d91798c4dc7f71664513cc 113 SUPERFAMILY SSF46785 8 101 3.52E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4892 628945d9ea65ce1bca5cd389362d4340 155 Pfam PF14039 YusW-like protein 51 144 4.8E-27 T 14-10-2018 IPR025623 YusW-like protein MC28_2573 f3bd576d0b5eb1137a7b0f7b0e859dbf 91 SMART SM00418 13 91 3.8E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2573 f3bd576d0b5eb1137a7b0f7b0e859dbf 91 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 6.1E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2573 f3bd576d0b5eb1137a7b0f7b0e859dbf 91 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 6.1E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2573 f3bd576d0b5eb1137a7b0f7b0e859dbf 91 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 6.1E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2573 f3bd576d0b5eb1137a7b0f7b0e859dbf 91 Gene3D G3DSA:1.10.10.10 1 91 3.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2573 f3bd576d0b5eb1137a7b0f7b0e859dbf 91 Pfam PF12840 Helix-turn-helix domain 12 71 1.1E-8 T 14-10-2018 MC28_2573 f3bd576d0b5eb1137a7b0f7b0e859dbf 91 SUPERFAMILY SSF46785 5 90 2.99E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_E095 79c7106bd1f8963d6caf19bfa50568e1 669 SUPERFAMILY SSF51096 293 504 2.62E-39 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_E095 79c7106bd1f8963d6caf19bfa50568e1 669 SUPERFAMILY SSF56849 39 290 2.09E-78 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E095 79c7106bd1f8963d6caf19bfa50568e1 669 Gene3D G3DSA:2.60.120.260 294 642 1.9E-89 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E095 79c7106bd1f8963d6caf19bfa50568e1 669 Gene3D G3DSA:1.20.190.10 65 292 2.7E-79 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E095 79c7106bd1f8963d6caf19bfa50568e1 669 Gene3D G3DSA:2.100.10.10 304 502 1.9E-89 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_E095 79c7106bd1f8963d6caf19bfa50568e1 669 Pfam PF03945 delta endotoxin, N-terminal domain 89 290 5.7E-26 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_E095 79c7106bd1f8963d6caf19bfa50568e1 669 SUPERFAMILY SSF49785 506 644 1.03E-26 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E095 79c7106bd1f8963d6caf19bfa50568e1 669 Pfam PF00555 delta endotoxin 299 503 4.3E-40 T 14-10-2018 IPR001178 Pesticidal crystal protein, central domain GO:0005102|GO:0009405 MC28_E095 79c7106bd1f8963d6caf19bfa50568e1 669 Pfam PF03944 delta endotoxin 514 644 1.0E-23 T 14-10-2018 IPR005638 Pesticidal crystal protein, C-terminal GO:0090729 MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 534 599 1.1E-5 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 PRINTS PR00723 Subtilisin serine protease family (S8) signature 421 437 1.1E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 PRINTS PR00723 Subtilisin serine protease family (S8) signature 200 219 1.1E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 PRINTS PR00723 Subtilisin serine protease family (S8) signature 234 247 1.1E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 422 432 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 Pfam PF00082 Subtilase family 204 468 1.1E-16 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 SUPERFAMILY SSF89260 503 612 7.59E-32 T 14-10-2018 MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 Gene3D G3DSA:3.40.50.200 167 486 3.0E-34 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 Gene3D G3DSA:2.60.120.380 497 613 8.2E-26 T 14-10-2018 MC28_2931 5824e37e0d0cb242ac37bb5957563b87 613 SUPERFAMILY SSF52743 180 465 3.27E-35 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_1451 317c0efcef49cd0b5f29def00ee726b0 333 SUPERFAMILY SSF52540 19 260 2.58E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1451 317c0efcef49cd0b5f29def00ee726b0 333 Gene3D G3DSA:3.40.50.300 17 290 1.5E-80 T 14-10-2018 MC28_1451 317c0efcef49cd0b5f29def00ee726b0 333 Pfam PF00005 ABC transporter 37 182 3.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1451 317c0efcef49cd0b5f29def00ee726b0 333 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_1451 317c0efcef49cd0b5f29def00ee726b0 333 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 32 317 7.2E-103 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 MC28_1451 317c0efcef49cd0b5f29def00ee726b0 333 SMART SM00382 45 240 1.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4818 0e338df27b45808f9deabb4d3aa57024 156 SUPERFAMILY SSF47973 1 149 9.42E-61 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily MC28_4818 0e338df27b45808f9deabb4d3aa57024 156 PIRSF PIRSF002122 5 156 4.4E-59 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 MC28_4818 0e338df27b45808f9deabb4d3aa57024 156 Gene3D G3DSA:1.10.455.10 2 156 1.5E-63 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily MC28_4818 0e338df27b45808f9deabb4d3aa57024 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.4E-70 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 MC28_4818 0e338df27b45808f9deabb4d3aa57024 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4818 0e338df27b45808f9deabb4d3aa57024 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 7.1E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain MC28_4818 0e338df27b45808f9deabb4d3aa57024 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.574 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 MC28_4186 6dd8de286121d8d75f070a23f4091dea 197 Pfam PF02632 BioY family 35 180 5.1E-29 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 MC28_4186 6dd8de286121d8d75f070a23f4091dea 197 PIRSF PIRSF016661 1 190 1.5E-40 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 MC28_4186 6dd8de286121d8d75f070a23f4091dea 197 Gene3D G3DSA:1.10.1760.20 1 187 9.0E-43 T 14-10-2018 MC28_1930 4089a55309ec9489408fa6b60363b35f 581 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 416 580 1.8E-50 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 MC28_1930 4089a55309ec9489408fa6b60363b35f 581 Gene3D G3DSA:1.10.390.10 418 580 2.2E-47 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily MC28_1930 4089a55309ec9489408fa6b60363b35f 581 Gene3D G3DSA:3.10.170.10 261 417 9.3E-38 T 14-10-2018 MC28_1930 4089a55309ec9489408fa6b60363b35f 581 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 100 147 1.3E-12 T 14-10-2018 IPR011096 FTP domain MC28_1930 4089a55309ec9489408fa6b60363b35f 581 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 262 413 2.8E-34 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 MC28_1930 4089a55309ec9489408fa6b60363b35f 581 SUPERFAMILY SSF55486 260 580 1.03E-67 T 14-10-2018 MC28_1930 4089a55309ec9489408fa6b60363b35f 581 Gene3D G3DSA:3.10.450.490 67 157 7.0E-6 T 14-10-2018 MC28_1930 4089a55309ec9489408fa6b60363b35f 581 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 404 420 2.6E-14 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_1930 4089a55309ec9489408fa6b60363b35f 581 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 425 436 2.6E-14 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_1930 4089a55309ec9489408fa6b60363b35f 581 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 495 511 2.6E-14 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_1377 9a0b3c30ee011299182e700b4bef820c 112 Pfam PF14201 Domain of unknown function (DUF4318) 42 112 1.4E-26 T 14-10-2018 IPR025467 Protein of unknown function DUF4318 MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 Gene3D G3DSA:3.40.50.10710 207 357 5.4E-194 T 14-10-2018 MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 SMART SM00849 21 215 4.9E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 PIRSF PIRSF004803 1 555 1.1E-248 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 553 2.0E-232 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 48.295 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 Gene3D G3DSA:3.10.20.580 449 555 4.3E-40 T 14-10-2018 MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 SUPERFAMILY SSF56281 11 423 1.9E-96 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 Gene3D G3DSA:3.60.15.10 12 442 5.4E-194 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 1.7E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3266 f7be3ebfb85da5762d44851ae774fa41 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 359 407 2.8E-9 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain MC28_4452 ea1d20d1c42f8e0af5043eeb10ef356b 392 Pfam PF01757 Acyltransferase family 17 349 3.5E-30 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 MC28_4757 e17bde0564c7eb9439c16d335c3c84fd 287 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 3 276 3.0E-152 T 14-10-2018 IPR008764 Peptidase U57, YabG MC28_4757 e17bde0564c7eb9439c16d335c3c84fd 287 Pfam PF05582 YabG peptidase U57 5 281 3.9E-112 T 14-10-2018 IPR008764 Peptidase U57, YabG MC28_4757 e17bde0564c7eb9439c16d335c3c84fd 287 PIRSF PIRSF011575 2 286 2.7E-110 T 14-10-2018 IPR008764 Peptidase U57, YabG MC28_4757 e17bde0564c7eb9439c16d335c3c84fd 287 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 4 282 1.1E-138 T 14-10-2018 IPR008764 Peptidase U57, YabG MC28_2616 2f9651654fcb0da7b10dcaed2f4b3539 220 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 3 219 2.7E-101 T 14-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 MC28_2616 2f9651654fcb0da7b10dcaed2f4b3539 220 Gene3D G3DSA:3.40.50.10320 1 215 9.2E-50 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 MC28_2616 2f9651654fcb0da7b10dcaed2f4b3539 220 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 135 5.5E-29 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 MC28_2616 2f9651654fcb0da7b10dcaed2f4b3539 220 SUPERFAMILY SSF102588 3 219 5.23E-50 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 MC28_2246 5fc9a971980ee035a83067f89b64858d 223 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 25 209 2.5E-9 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 MC28_2246 5fc9a971980ee035a83067f89b64858d 223 SUPERFAMILY SSF52540 9 211 2.4E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2246 5fc9a971980ee035a83067f89b64858d 223 Gene3D G3DSA:3.40.50.300 2 211 6.4E-46 T 14-10-2018 MC28_F112 08e33f1666e4f6f9fedcd557adbbfd06 217 Gene3D G3DSA:1.25.40.340 2 203 1.1E-59 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_F112 08e33f1666e4f6f9fedcd557adbbfd06 217 SMART SM01120 32 201 4.0E-64 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_F112 08e33f1666e4f6f9fedcd557adbbfd06 217 SUPERFAMILY SSF101473 3 200 1.12E-52 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_F112 08e33f1666e4f6f9fedcd557adbbfd06 217 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 200 9.2E-72 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 MC28_F112 08e33f1666e4f6f9fedcd557adbbfd06 217 Pfam PF02734 DAK2 domain 33 200 5.4E-49 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_2133 887a39680dde4d5a9b3687fceb994ad0 223 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 11 183 7.3E-69 T 14-10-2018 IPR022301 Integral membrane protein YjbE MC28_2133 887a39680dde4d5a9b3687fceb994ad0 223 Pfam PF03741 Integral membrane protein TerC family 14 182 5.6E-45 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 MC28_0564 5e48ac5915e83b173904ccffe424e668 93 Gene3D G3DSA:1.20.58.990 8 65 8.2E-14 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_0564 5e48ac5915e83b173904ccffe424e668 93 Pfam PF09388 Spo0E like sporulation regulatory protein 13 54 6.3E-15 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 MC28_0564 5e48ac5915e83b173904ccffe424e668 93 SUPERFAMILY SSF140500 9 62 2.35E-15 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_1843 2cecff807348141d9f884181576d61c2 182 Gene3D G3DSA:1.10.1760.20 1 175 3.5E-20 T 14-10-2018 MC28_1843 2cecff807348141d9f884181576d61c2 182 Hamap MF_01572 UPF0397 protein . 2 181 21.162 T 14-10-2018 IPR022914 Protein of unknown function UPF0397 MC28_1843 2cecff807348141d9f884181576d61c2 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 170 4.2E-36 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 MC28_3871 1662ecad062759470437e2a47beb7970 435 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 27 422 6.0E-124 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 MC28_3871 1662ecad062759470437e2a47beb7970 435 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 312 331 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 MC28_3871 1662ecad062759470437e2a47beb7970 435 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 6 428 1.5E-220 T 14-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 MC28_3871 1662ecad062759470437e2a47beb7970 435 Gene3D G3DSA:3.40.718.10 2 428 1.2E-182 T 14-10-2018 MC28_3871 1662ecad062759470437e2a47beb7970 435 SMART SM01329 26 423 4.7E-186 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 MC28_3871 1662ecad062759470437e2a47beb7970 435 SUPERFAMILY SSF53659 6 427 2.16E-142 T 14-10-2018 MC28_0333 8ef933790018899ed4607245fd6de8a3 374 Pfam PF13490 Putative zinc-finger 3 36 5.2E-6 T 14-10-2018 IPR027383 Putative zinc-finger MC28_0333 8ef933790018899ed4607245fd6de8a3 374 Pfam PF13800 Sigma factor regulator N-terminal 65 153 2.5E-18 T 14-10-2018 IPR029101 Sigma factor regulator, N-terminal MC28_0333 8ef933790018899ed4607245fd6de8a3 374 Pfam PF13791 Sigma factor regulator C-terminal 207 364 2.6E-39 T 14-10-2018 IPR025672 Sigma factor regulator C-terminal domain MC28_0919 041a4a59e6b11bf2912c1eff8e136960 278 Pfam PF11495 Archaeal transcriptional regulator TrmB 108 227 1.3E-6 T 14-10-2018 IPR021586 Transcription regulator TrmB, C-terminal MC28_0919 041a4a59e6b11bf2912c1eff8e136960 278 SUPERFAMILY SSF46785 2 97 9.11E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0919 041a4a59e6b11bf2912c1eff8e136960 278 Gene3D G3DSA:1.10.10.10 1 101 6.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0919 041a4a59e6b11bf2912c1eff8e136960 278 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 8 74 5.5E-24 T 14-10-2018 IPR002831 Transcription regulator TrmB, N-terminal MC28_1927 fe1724b5cd7b374764e43f9149f49736 344 SUPERFAMILY SSF53474 86 326 4.76E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1927 fe1724b5cd7b374764e43f9149f49736 344 Gene3D G3DSA:3.40.50.1820 54 329 3.8E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1927 fe1724b5cd7b374764e43f9149f49736 344 Pfam PF09752 Abhydrolase domain containing 18 138 209 1.1E-4 T 14-10-2018 IPR019149 Abhydrolase domain containing 18 MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 7.4E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 SUPERFAMILY SSF46785 10 79 1.19E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 SUPERFAMILY SSF53383 111 475 2.86E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 SMART SM00345 17 76 3.5E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 Gene3D G3DSA:1.10.10.10 3 77 1.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 Gene3D G3DSA:3.90.1150.10 113 475 1.1E-104 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 Pfam PF00155 Aminotransferase class I and II 119 471 9.8E-36 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_E123 2e36d791dfbde276e47b6195dd57f2c2 480 Gene3D G3DSA:3.40.640.10 152 372 1.1E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_5021 35dd3faa302c90eac3a567497729079f 669 SUPERFAMILY SSF50249 314 396 5.82E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_5021 35dd3faa302c90eac3a567497729079f 669 PIRSF PIRSF001604 1 669 1.1E-261 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 MC28_5021 35dd3faa302c90eac3a567497729079f 669 SUPERFAMILY SSF47781 401 581 3.71E-66 T 14-10-2018 IPR010994 RuvA domain 2-like MC28_5021 35dd3faa302c90eac3a567497729079f 669 SUPERFAMILY SSF56091 4 313 5.76E-122 T 14-10-2018 MC28_5021 35dd3faa302c90eac3a567497729079f 669 Gene3D G3DSA:2.20.70.80 388 425 2.8E-11 T 14-10-2018 MC28_5021 35dd3faa302c90eac3a567497729079f 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 663 2.2E-270 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 MC28_5021 35dd3faa302c90eac3a567497729079f 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 328 343 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site MC28_5021 35dd3faa302c90eac3a567497729079f 669 SUPERFAMILY SSF52113 594 667 1.13E-19 T 14-10-2018 IPR036420 BRCT domain superfamily MC28_5021 35dd3faa302c90eac3a567497729079f 669 Gene3D G3DSA:1.10.287.610 1 73 5.1E-26 T 14-10-2018 MC28_5021 35dd3faa302c90eac3a567497729079f 669 SMART SM00278 476 495 0.98 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_5021 35dd3faa302c90eac3a567497729079f 669 SMART SM00278 442 461 120.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_5021 35dd3faa302c90eac3a567497729079f 669 SMART SM00278 540 559 3.3 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_5021 35dd3faa302c90eac3a567497729079f 669 Gene3D G3DSA:1.10.150.20 428 500 2.2E-31 T 14-10-2018 MC28_5021 35dd3faa302c90eac3a567497729079f 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 315 3.1E-129 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 MC28_5021 35dd3faa302c90eac3a567497729079f 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 319 395 7.4E-34 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 MC28_5021 35dd3faa302c90eac3a567497729079f 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 404 430 5.0E-10 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 MC28_5021 35dd3faa302c90eac3a567497729079f 669 SMART SM00532 5 444 2.4E-276 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 MC28_5021 35dd3faa302c90eac3a567497729079f 669 Pfam PF12826 Helix-hairpin-helix motif 506 568 1.0E-24 T 14-10-2018 MC28_5021 35dd3faa302c90eac3a567497729079f 669 SMART SM00292 593 669 1.6E-14 T 14-10-2018 IPR001357 BRCT domain MC28_5021 35dd3faa302c90eac3a567497729079f 669 Pfam PF14520 Helix-hairpin-helix domain 444 496 1.5E-6 T 14-10-2018 MC28_5021 35dd3faa302c90eac3a567497729079f 669 Gene3D G3DSA:3.30.470.90 74 314 2.9E-102 T 14-10-2018 MC28_5021 35dd3faa302c90eac3a567497729079f 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site MC28_5021 35dd3faa302c90eac3a567497729079f 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 593 665 2.5E-14 T 14-10-2018 IPR001357 BRCT domain MC28_5021 35dd3faa302c90eac3a567497729079f 669 Gene3D G3DSA:1.10.150.20 501 582 2.9E-28 T 14-10-2018 MC28_5021 35dd3faa302c90eac3a567497729079f 669 Gene3D G3DSA:3.40.50.10190 590 669 8.6E-25 T 14-10-2018 IPR036420 BRCT domain superfamily MC28_5021 35dd3faa302c90eac3a567497729079f 669 Hamap MF_01588 DNA ligase [ligA]. 4 667 53.276 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 MC28_5021 35dd3faa302c90eac3a567497729079f 669 Gene3D G3DSA:2.40.50.140 315 387 1.1E-29 T 14-10-2018 MC28_C066 b7fa5da273c81ccc6771578e4cad4c77 181 SUPERFAMILY SSF53041 9 152 2.75E-29 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_C066 b7fa5da273c81ccc6771578e4cad4c77 181 Gene3D G3DSA:3.40.50.1390 9 153 3.1E-28 T 14-10-2018 MC28_C066 b7fa5da273c81ccc6771578e4cad4c77 181 Pfam PF00239 Resolvase, N terminal domain 11 152 2.0E-25 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_C066 b7fa5da273c81ccc6771578e4cad4c77 181 SMART SM00857 5 153 3.4E-26 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_C066 b7fa5da273c81ccc6771578e4cad4c77 181 ProSitePatterns PS00398 Site-specific recombinases signature 2. 60 72 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_2112 8600a7ed5eac5ae559fdcf4bb91fc206 275 SUPERFAMILY SSF110710 11 272 2.88E-96 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like MC28_2112 8600a7ed5eac5ae559fdcf4bb91fc206 275 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 42 270 1.4E-79 T 14-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 MC28_4217 78666fa15e89ee0e5678295fc84f4e13 337 SUPERFAMILY SSF56112 6 177 2.35E-7 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_4217 78666fa15e89ee0e5678295fc84f4e13 337 SUPERFAMILY SSF56112 219 318 7.45E-6 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_4217 78666fa15e89ee0e5678295fc84f4e13 337 Gene3D G3DSA:3.90.1200.10 94 317 1.5E-23 T 14-10-2018 MC28_4217 78666fa15e89ee0e5678295fc84f4e13 337 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 7 317 2.6E-110 T 14-10-2018 IPR014254 Spore coat protein YutH MC28_1792 e6c02598c4067c2b9fda841a6ccf2ad2 304 Gene3D G3DSA:2.40.10.120 84 127 3.3E-63 T 14-10-2018 MC28_1792 e6c02598c4067c2b9fda841a6ccf2ad2 304 Gene3D G3DSA:3.10.28.20 214 290 2.2E-19 T 14-10-2018 MC28_1792 e6c02598c4067c2b9fda841a6ccf2ad2 304 Pfam PF03069 Acetamidase/Formamidase family 16 141 9.4E-11 T 14-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 MC28_1792 e6c02598c4067c2b9fda841a6ccf2ad2 304 Pfam PF03069 Acetamidase/Formamidase family 147 275 1.4E-20 T 14-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 MC28_1792 e6c02598c4067c2b9fda841a6ccf2ad2 304 Gene3D G3DSA:2.60.120.580 22 208 3.3E-63 T 14-10-2018 MC28_1792 e6c02598c4067c2b9fda841a6ccf2ad2 304 SUPERFAMILY SSF141130 2 289 2.75E-85 T 14-10-2018 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 Pfam PF00067 Cytochrome P450 4 373 2.9E-38 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 Gene3D G3DSA:1.10.630.10 4 404 3.3E-108 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 SUPERFAMILY SSF48264 22 401 1.31E-84 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 PRINTS PR00359 B-class P450 signature 88 99 4.1E-41 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 PRINTS PR00359 B-class P450 signature 194 216 4.1E-41 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 PRINTS PR00359 B-class P450 signature 292 319 4.1E-41 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 PRINTS PR00359 B-class P450 signature 134 150 4.1E-41 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 PRINTS PR00359 B-class P450 signature 342 351 4.1E-41 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 PRINTS PR00359 B-class P450 signature 351 362 4.1E-41 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 PRINTS PR00359 B-class P450 signature 320 335 4.1E-41 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 PRINTS PR00359 B-class P450 signature 151 166 4.1E-41 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 MC28_1835 acbbb8ea5e004e6638dbe5105e1f5ab2 404 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 344 353 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 MC28_F085 f1cf8cf52e793e32953d826ebe6911f6 795 Pfam PF03272 Putative mucin or carbohydrate-binding module 534 652 5.3E-26 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_F085 f1cf8cf52e793e32953d826ebe6911f6 795 Pfam PF03272 Putative mucin or carbohydrate-binding module 400 513 6.5E-28 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_F085 f1cf8cf52e793e32953d826ebe6911f6 795 Pfam PF03272 Putative mucin or carbohydrate-binding module 673 791 3.6E-25 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_F085 f1cf8cf52e793e32953d826ebe6911f6 795 Pfam PF11958 Domain of unknown function (DUF3472) 112 270 1.0E-28 T 14-10-2018 IPR021862 Protein of unknown function DUF3472 MC28_3015 2a81b199dcbe5f2487719390791aef9c 444 Gene3D G3DSA:3.40.50.300 151 441 2.6E-102 T 14-10-2018 MC28_3015 2a81b199dcbe5f2487719390791aef9c 444 SUPERFAMILY SSF52540 173 426 4.25E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3015 2a81b199dcbe5f2487719390791aef9c 444 Gene3D G3DSA:1.10.860.10 4 147 3.5E-34 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal MC28_3015 2a81b199dcbe5f2487719390791aef9c 444 SUPERFAMILY SSF48024 9 113 1.44E-19 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 MC28_3015 2a81b199dcbe5f2487719390791aef9c 444 Pfam PF00772 DnaB-like helicase N terminal domain 11 101 6.2E-19 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 MC28_3015 2a81b199dcbe5f2487719390791aef9c 444 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 11 435 4.2E-127 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 MC28_3015 2a81b199dcbe5f2487719390791aef9c 444 Pfam PF03796 DnaB-like helicase C terminal domain 175 433 1.8E-97 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 MC28_2167 fbef21d35945ce247711411b3e9f7e77 260 PIRSF PIRSF038992 1 258 3.3E-67 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 MC28_2167 fbef21d35945ce247711411b3e9f7e77 260 Pfam PF01791 DeoC/LacD family aldolase 19 227 1.9E-25 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 MC28_2167 fbef21d35945ce247711411b3e9f7e77 260 Gene3D G3DSA:3.20.20.70 1 260 2.6E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2167 fbef21d35945ce247711411b3e9f7e77 260 SUPERFAMILY SSF51569 4 243 4.03E-61 T 14-10-2018 MC28_2167 fbef21d35945ce247711411b3e9f7e77 260 SMART SM01133 18 228 4.9E-30 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 MC28_1684 36bae282e694cddd841ab3701e51b892 558 SUPERFAMILY SSF52467 166 339 1.31E-37 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_1684 36bae282e694cddd841ab3701e51b892 558 SUPERFAMILY SSF52518 365 551 3.75E-43 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_1684 36bae282e694cddd841ab3701e51b892 558 PIRSF PIRSF036565 1 558 2.9E-220 T 14-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 MC28_1684 36bae282e694cddd841ab3701e51b892 558 Gene3D G3DSA:3.40.50.1220 189 347 5.4E-52 T 14-10-2018 MC28_1684 36bae282e694cddd841ab3701e51b892 558 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 179 7.8E-35 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 MC28_1684 36bae282e694cddd841ab3701e51b892 558 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 403 535 8.6E-17 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 MC28_1684 36bae282e694cddd841ab3701e51b892 558 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 314 6.5E-28 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 MC28_1684 36bae282e694cddd841ab3701e51b892 558 Gene3D G3DSA:3.40.50.970 1 186 5.4E-80 T 14-10-2018 MC28_1684 36bae282e694cddd841ab3701e51b892 558 SUPERFAMILY SSF52518 5 181 6.38E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_1684 36bae282e694cddd841ab3701e51b892 558 Gene3D G3DSA:3.40.50.970 356 549 5.2E-59 T 14-10-2018 MC28_0414 7b0d8e0183c767337ef836ac840d113d 227 Pfam PF05389 Negative regulator of genetic competence (MecA) 2 219 2.1E-48 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA MC28_0414 7b0d8e0183c767337ef836ac840d113d 227 Hamap MF_01124 Adapter protein MecA [mecA]. 1 223 27.571 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA MC28_0414 7b0d8e0183c767337ef836ac840d113d 227 PIRSF PIRSF029008 1 225 3.1E-78 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA MC28_0414 7b0d8e0183c767337ef836ac840d113d 227 Gene3D G3DSA:3.30.70.1950 126 225 3.4E-30 T 14-10-2018 IPR038471 MecA, C-terminal domain superfamily MC28_2242 f45a8ef8e11e944ced7fd6ae8e6e5b9a 279 Pfam PF00512 His Kinase A (phospho-acceptor) domain 83 138 4.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2242 f45a8ef8e11e944ced7fd6ae8e6e5b9a 279 Gene3D G3DSA:3.30.565.10 152 278 9.4E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2242 f45a8ef8e11e944ced7fd6ae8e6e5b9a 279 SUPERFAMILY SSF55874 156 276 7.94E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2242 f45a8ef8e11e944ced7fd6ae8e6e5b9a 279 SMART SM00388 82 145 1.4E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2242 f45a8ef8e11e944ced7fd6ae8e6e5b9a 279 Gene3D G3DSA:1.10.287.130 18 137 8.9E-13 T 14-10-2018 MC28_2242 f45a8ef8e11e944ced7fd6ae8e6e5b9a 279 SUPERFAMILY SSF47384 71 136 2.35E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_2242 f45a8ef8e11e944ced7fd6ae8e6e5b9a 279 SMART SM00387 191 279 0.0016 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0476 4098bb46638d91150a2a371bf4445621 444 SUPERFAMILY SSF51905 3 316 3.35E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 7.7E-28 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 7.7E-28 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 7.7E-28 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 7.7E-28 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 7.7E-28 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 330 430 3.9E-15 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 MC28_0476 4098bb46638d91150a2a371bf4445621 444 Gene3D G3DSA:3.50.50.60 114 440 1.9E-161 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0476 4098bb46638d91150a2a371bf4445621 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 294 7.2E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 3.1E-20 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 3.1E-20 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 3.1E-20 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 402 3.1E-20 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 3.1E-20 T 14-10-2018 MC28_0476 4098bb46638d91150a2a371bf4445621 444 Gene3D G3DSA:3.50.50.60 3 340 1.9E-161 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0476 4098bb46638d91150a2a371bf4445621 444 SUPERFAMILY SSF55424 323 443 5.67E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 6 533 8.9E-280 T 14-10-2018 IPR014251 Sporulation protease LonB MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 Gene3D G3DSA:3.40.50.300 53 264 6.4E-31 T 14-10-2018 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 Gene3D G3DSA:3.30.230.10 349 551 4.8E-49 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 353 369 3.0E-32 T 14-10-2018 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 493 511 3.0E-32 T 14-10-2018 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 98 117 3.0E-32 T 14-10-2018 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 470 489 3.0E-32 T 14-10-2018 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 440 459 3.0E-32 T 14-10-2018 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 SUPERFAMILY SSF52540 56 329 3.12E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 SMART SM00382 90 268 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 443 451 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 94 267 3.9E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 174 189 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 SUPERFAMILY SSF54211 352 533 2.96E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_3763 5e3fead3382b63e788a96b41b5664ed7 557 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 351 534 3.3E-32 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 MC28_4070 ba45df1975eceec8044c3fb3d7c84e33 268 Gene3D G3DSA:1.10.3720.10 65 261 1.1E-23 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4070 ba45df1975eceec8044c3fb3d7c84e33 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 259 3.5E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_4070 ba45df1975eceec8044c3fb3d7c84e33 268 SUPERFAMILY SSF161098 67 249 8.24E-30 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 SUPERFAMILY SSF143724 121 318 6.28E-61 T 14-10-2018 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 16 693 2.7E-286 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 Gene3D G3DSA:3.30.870.10 516 702 2.9E-72 T 14-10-2018 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 Pfam PF13090 Polyphosphate kinase C-terminal domain 346 692 5.1E-156 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 SUPERFAMILY SSF56024 332 512 6.67E-57 T 14-10-2018 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 Pfam PF02503 Polyphosphate kinase middle domain 132 337 1.1E-70 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 SUPERFAMILY SSF140356 14 117 1.44E-39 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 Hamap MF_00347 Polyphosphate kinase [ppk]. 14 697 29.464 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 PIRSF PIRSF015589 4 702 1.7E-280 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 Gene3D G3DSA:3.30.1840.10 10 325 3.3E-112 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 Gene3D G3DSA:3.30.870.10 333 515 6.3E-74 T 14-10-2018 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 SUPERFAMILY SSF56024 516 698 3.14E-72 T 14-10-2018 MC28_3283 54bfa39fa4fde4920cb15686877e54f7 702 Pfam PF13089 Polyphosphate kinase N-terminal domain 17 122 1.0E-40 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 MC28_1868 cc1c9a2784c5da0b8f7214b1278e6fdd 291 SUPERFAMILY SSF51695 38 285 1.26E-74 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_1868 cc1c9a2784c5da0b8f7214b1278e6fdd 291 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 44 279 1.6E-50 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 MC28_1868 cc1c9a2784c5da0b8f7214b1278e6fdd 291 Gene3D G3DSA:3.20.20.190 21 291 6.0E-99 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Gene3D G3DSA:1.20.1640.10 496 994 8.6E-268 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 SUPERFAMILY SSF82714 694 778 7.32E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MC28_4669 7b629c52820a7c828d553b2569905266 1006 SUPERFAMILY SSF82866 282 483 8.89E-44 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Gene3D G3DSA:3.30.70.1430 549 642 8.6E-268 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Gene3D G3DSA:1.20.1640.10 1 495 8.6E-268 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Gene3D G3DSA:3.30.2090.10 145 261 8.6E-268 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MC28_4669 7b629c52820a7c828d553b2569905266 1006 PRINTS PR00702 Acriflavin resistance protein family signature 457 480 9.6E-46 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_4669 7b629c52820a7c828d553b2569905266 1006 PRINTS PR00702 Acriflavin resistance protein family signature 7 25 9.6E-46 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_4669 7b629c52820a7c828d553b2569905266 1006 PRINTS PR00702 Acriflavin resistance protein family signature 348 369 9.6E-46 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_4669 7b629c52820a7c828d553b2569905266 1006 PRINTS PR00702 Acriflavin resistance protein family signature 376 400 9.6E-46 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_4669 7b629c52820a7c828d553b2569905266 1006 PRINTS PR00702 Acriflavin resistance protein family signature 432 455 9.6E-46 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_4669 7b629c52820a7c828d553b2569905266 1006 PRINTS PR00702 Acriflavin resistance protein family signature 534 551 9.6E-46 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_4669 7b629c52820a7c828d553b2569905266 1006 PRINTS PR00702 Acriflavin resistance protein family signature 321 344 9.6E-46 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_4669 7b629c52820a7c828d553b2569905266 1006 SUPERFAMILY SSF82693 9 101 1.14E-21 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Gene3D G3DSA:3.30.70.1430 9 788 8.6E-268 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Gene3D G3DSA:3.30.70.1440 643 837 8.6E-268 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 SUPERFAMILY SSF82693 102 313 9.77E-17 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 SUPERFAMILY SSF82866 779 1003 5.89E-47 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Gene3D G3DSA:3.30.70.1320 100 317 8.6E-268 T 14-10-2018 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Pfam PF00873 AcrB/AcrD/AcrF family 246 997 6.1E-173 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Pfam PF00873 AcrB/AcrD/AcrF family 3 212 1.4E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 MC28_4669 7b629c52820a7c828d553b2569905266 1006 Gene3D G3DSA:3.30.2090.10 692 780 8.6E-268 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MC28_1385 399f08c038bf9f058336bb274c1049cc 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 7.8E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 7.8E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 7.8E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 297 318 7.8E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 Pfam PF00750 tRNA synthetases class I (R) 94 435 2.1E-100 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 Gene3D G3DSA:3.40.50.620 109 443 1.0E-123 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_1385 399f08c038bf9f058336bb274c1049cc 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 2 84 1.2E-15 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 SMART SM00836 450 562 5.6E-41 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 SUPERFAMILY SSF52374 112 444 5.94E-98 T 14-10-2018 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 SMART SM01016 1 84 1.8E-19 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 SUPERFAMILY SSF55190 7 105 3.79E-24 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 Pfam PF05746 DALR anticodon binding domain 450 562 5.1E-32 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 562 9.1E-156 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 Gene3D G3DSA:3.30.1360.70 2 105 6.2E-29 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 SUPERFAMILY SSF47323 444 562 1.57E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 1 562 25.57 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 MC28_1385 399f08c038bf9f058336bb274c1049cc 562 Gene3D G3DSA:1.10.730.10 444 562 1.9E-35 T 14-10-2018 MC28_2719 63feadfd27a4133ce746c4b015e75eea 265 Gene3D G3DSA:3.40.140.10 116 265 1.6E-47 T 14-10-2018 MC28_2719 63feadfd27a4133ce746c4b015e75eea 265 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 262 2.8E-74 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 MC28_2719 63feadfd27a4133ce746c4b015e75eea 265 Pfam PF02634 FdhD/NarQ family 26 261 1.3E-79 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 MC28_2719 63feadfd27a4133ce746c4b015e75eea 265 Gene3D G3DSA:3.10.20.10 28 110 1.9E-13 T 14-10-2018 MC28_2719 63feadfd27a4133ce746c4b015e75eea 265 PIRSF PIRSF015626 1 264 2.9E-79 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 MC28_2719 63feadfd27a4133ce746c4b015e75eea 265 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 262 32.194 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 MC28_2719 63feadfd27a4133ce746c4b015e75eea 265 SUPERFAMILY SSF53927 5 261 3.91E-77 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 MC28_2037 e3dee1390488092fb5b1ce8128895524 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 461 1.3E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_2037 e3dee1390488092fb5b1ce8128895524 542 Gene3D G3DSA:3.90.76.10 70 191 5.3E-173 T 14-10-2018 MC28_2037 e3dee1390488092fb5b1ce8128895524 542 Gene3D G3DSA:3.40.190.10 51 530 5.3E-173 T 14-10-2018 MC28_2037 e3dee1390488092fb5b1ce8128895524 542 PIRSF PIRSF002741 1 542 2.3E-97 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_2037 e3dee1390488092fb5b1ce8128895524 542 Gene3D G3DSA:3.10.105.10 291 513 5.3E-173 T 14-10-2018 MC28_2037 e3dee1390488092fb5b1ce8128895524 542 SUPERFAMILY SSF53850 36 532 1.81E-120 T 14-10-2018 MC28_F225 23138d6b4396d59eae1f57b4d459b47c 77 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 12 73 6.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_F225 23138d6b4396d59eae1f57b4d459b47c 77 Gene3D G3DSA:3.30.565.10 5 76 2.7E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_F225 23138d6b4396d59eae1f57b4d459b47c 77 PRINTS PR00344 Bacterial sensor protein C-terminal signature 37 55 2.8E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_F225 23138d6b4396d59eae1f57b4d459b47c 77 PRINTS PR00344 Bacterial sensor protein C-terminal signature 20 30 2.8E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_F225 23138d6b4396d59eae1f57b4d459b47c 77 SUPERFAMILY SSF55874 13 74 7.31E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5252 aec92c6cb3b8a336c22fbde0a108eb0e 586 Pfam PF00664 ABC transporter transmembrane region 20 294 9.5E-41 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 MC28_5252 aec92c6cb3b8a336c22fbde0a108eb0e 586 Pfam PF00005 ABC transporter 358 507 4.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5252 aec92c6cb3b8a336c22fbde0a108eb0e 586 SUPERFAMILY SSF52540 332 577 4.53E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5252 aec92c6cb3b8a336c22fbde0a108eb0e 586 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_5252 aec92c6cb3b8a336c22fbde0a108eb0e 586 SUPERFAMILY SSF90123 5 324 1.15E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_5252 aec92c6cb3b8a336c22fbde0a108eb0e 586 Gene3D G3DSA:1.20.1560.10 4 324 4.7E-111 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_5252 aec92c6cb3b8a336c22fbde0a108eb0e 586 Gene3D G3DSA:3.40.50.300 331 583 7.5E-92 T 14-10-2018 MC28_5252 aec92c6cb3b8a336c22fbde0a108eb0e 586 SMART SM00382 367 553 1.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3677 c210d0a2ae43b459809a30d677836010 137 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 8.3E-53 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 MC28_3677 c210d0a2ae43b459809a30d677836010 137 Gene3D G3DSA:3.30.420.140 1 137 2.3E-53 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 MC28_3677 c210d0a2ae43b459809a30d677836010 137 SUPERFAMILY SSF53098 1 136 6.68E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_3677 c210d0a2ae43b459809a30d677836010 137 SMART SM00732 1 103 2.7E-42 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 MC28_3677 c210d0a2ae43b459809a30d677836010 137 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 137 25.766 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 MC28_3677 c210d0a2ae43b459809a30d677836010 137 Pfam PF03652 Holliday junction resolvase 1 136 1.9E-47 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 MC28_3164 d32d7bba2f9b8a1cba08406e5a7f9210 190 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 5 181 3.5E-42 T 14-10-2018 IPR006490 Phage major tail protein, phi13 family MC28_2303 253531c0f0f7e52c2fbb35b13e6fe370 613 Gene3D G3DSA:3.20.20.140 64 495 4.0E-83 T 14-10-2018 MC28_2303 253531c0f0f7e52c2fbb35b13e6fe370 613 SUPERFAMILY SSF51338 5 540 1.44E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_2303 253531c0f0f7e52c2fbb35b13e6fe370 613 Gene3D G3DSA:3.10.310.70 83 206 4.0E-83 T 14-10-2018 MC28_2303 253531c0f0f7e52c2fbb35b13e6fe370 613 SUPERFAMILY SSF51556 63 496 4.54E-43 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_2303 253531c0f0f7e52c2fbb35b13e6fe370 613 Gene3D G3DSA:2.30.40.10 12 511 4.0E-83 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_2303 253531c0f0f7e52c2fbb35b13e6fe370 613 Pfam PF07969 Amidohydrolase family 54 536 1.5E-107 T 14-10-2018 IPR013108 Amidohydrolase 3 MC28_3464 931c492757c2c87408fd28f822d63398 276 Gene3D G3DSA:3.40.50.2300 5 144 1.0E-32 T 14-10-2018 MC28_3464 931c492757c2c87408fd28f822d63398 276 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 14 276 6.3E-138 T 14-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 MC28_3464 931c492757c2c87408fd28f822d63398 276 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 165 275 2.0E-59 T 14-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 MC28_3464 931c492757c2c87408fd28f822d63398 276 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 166 269 1.3E-45 T 14-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 MC28_3464 931c492757c2c87408fd28f822d63398 276 Pfam PF00072 Response regulator receiver domain 18 131 5.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3464 931c492757c2c87408fd28f822d63398 276 SUPERFAMILY SSF52172 14 139 3.27E-32 T 14-10-2018 IPR011006 CheY-like superfamily MC28_3464 931c492757c2c87408fd28f822d63398 276 SMART SM00448 16 131 2.5E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3464 931c492757c2c87408fd28f822d63398 276 PIRSF PIRSF002937 11 276 2.2E-132 T 14-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 MC28_3464 931c492757c2c87408fd28f822d63398 276 Gene3D G3DSA:1.10.10.10 157 276 2.5E-55 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3464 931c492757c2c87408fd28f822d63398 276 SUPERFAMILY SSF46894 160 274 1.19E-48 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_3139 17a1d1df5c08c971cacfea2bde30ad30 120 Pfam PF04977 Septum formation initiator 45 111 7.8E-14 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC MC28_3139 17a1d1df5c08c971cacfea2bde30ad30 120 Hamap MF_00910 Cell division protein FtsL [ftsL]. 38 120 13.151 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 MC28_3139 17a1d1df5c08c971cacfea2bde30ad30 120 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 38 118 1.4E-23 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 MC28_4801 29815ec0383be11b91c1f72b01833acf 249 SUPERFAMILY SSF51161 27 196 2.22E-58 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_4801 29815ec0383be11b91c1f72b01833acf 249 Gene3D G3DSA:1.10.3130.10 19 94 8.5E-26 T 14-10-2018 MC28_4801 29815ec0383be11b91c1f72b01833acf 249 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 34 194 3.6E-79 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 MC28_4801 29815ec0383be11b91c1f72b01833acf 249 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 3.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_4801 29815ec0383be11b91c1f72b01833acf 249 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 99 136 1.9E-6 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_4801 29815ec0383be11b91c1f72b01833acf 249 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 154 182 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 MC28_4801 29815ec0383be11b91c1f72b01833acf 249 PIRSF PIRSF000441 27 246 1.1E-87 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 MC28_4801 29815ec0383be11b91c1f72b01833acf 249 Gene3D G3DSA:2.160.10.10 95 211 4.2E-37 T 14-10-2018 MC28_4801 29815ec0383be11b91c1f72b01833acf 249 Pfam PF06426 Serine acetyltransferase, N-terminal 25 63 2.4E-5 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 MC28_2952 d81d71d7c1a1217a4603e50f220cac13 174 Gene3D G3DSA:1.20.120.1760 8 169 2.0E-9 T 14-10-2018 MC28_2952 d81d71d7c1a1217a4603e50f220cac13 174 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 17 169 1.1E-54 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 MC28_2952 d81d71d7c1a1217a4603e50f220cac13 174 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 41 63 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MC28_2952 d81d71d7c1a1217a4603e50f220cac13 174 PIRSF PIRSF000847 1 174 4.1E-43 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 MC28_2952 d81d71d7c1a1217a4603e50f220cac13 174 Pfam PF01066 CDP-alcohol phosphatidyltransferase 24 63 3.5E-12 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MC28_1989 5fa69823dec66e87be05dabcecaf619c 174 Gene3D G3DSA:3.40.50.300 1 172 1.7E-18 T 14-10-2018 MC28_1989 5fa69823dec66e87be05dabcecaf619c 174 SUPERFAMILY SSF52540 1 143 8.47E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3092 717a234eb6934e56b117fb0b574089f3 401 Gene3D G3DSA:3.40.50.10300 185 401 2.8E-91 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 MC28_3092 717a234eb6934e56b117fb0b574089f3 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 366 1.1E-71 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 MC28_3092 717a234eb6934e56b117fb0b574089f3 401 SUPERFAMILY SSF52507 1 179 4.32E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 MC28_3092 717a234eb6934e56b117fb0b574089f3 401 SUPERFAMILY SSF102645 183 396 2.75E-77 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 MC28_3092 717a234eb6934e56b117fb0b574089f3 401 Gene3D G3DSA:3.40.50.1950 1 184 3.5E-59 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 MC28_3092 717a234eb6934e56b117fb0b574089f3 401 Pfam PF02441 Flavoprotein 5 177 1.4E-44 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 MC28_3092 717a234eb6934e56b117fb0b574089f3 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 392 3.6E-151 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 MC28_2134 bdfeb8675241f29755d2726234218a9b 664 PIRSF PIRSF005091 6 633 6.4E-194 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like MC28_2134 bdfeb8675241f29755d2726234218a9b 664 SUPERFAMILY SSF53649 257 651 1.38E-81 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_2134 bdfeb8675241f29755d2726234218a9b 664 Pfam PF00884 Sulfatase 260 548 1.0E-39 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 MC28_2134 bdfeb8675241f29755d2726234218a9b 664 Gene3D G3DSA:3.40.720.10 251 559 8.0E-83 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 6.9E-55 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 Gene3D G3DSA:1.20.140.10 239 381 7.8E-59 T 14-10-2018 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 SUPERFAMILY SSF56645 4 244 2.23E-86 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 PIRSF PIRSF016578 9 371 2.6E-22 T 14-10-2018 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 Gene3D G3DSA:1.10.540.10 1 124 3.5E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 122 2.0E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 SUPERFAMILY SSF47203 231 381 5.15E-62 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 Gene3D G3DSA:2.40.110.10 125 238 1.3E-44 T 14-10-2018 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 220 4.5E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 MC28_4578 084fd42d1fa2e2e1b25afcde329b1bf4 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_3709 0755bfd90ab939613956d2f895deb468 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 132 365 1.1E-92 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 MC28_3709 0755bfd90ab939613956d2f895deb468 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 57.4 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 MC28_3709 0755bfd90ab939613956d2f895deb468 379 Gene3D G3DSA:3.20.20.105 1 373 2.9E-170 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 MC28_3709 0755bfd90ab939613956d2f895deb468 379 SUPERFAMILY SSF51713 2 369 1.57E-161 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 MC28_3709 0755bfd90ab939613956d2f895deb468 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 373 7.2E-174 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 MC28_3709 0755bfd90ab939613956d2f895deb468 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 373 6.7E-185 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 MC28_0021 77f9dd11972599d449aca73dbc650ff3 384 SUPERFAMILY SSF52402 254 372 5.16E-15 T 14-10-2018 MC28_0021 77f9dd11972599d449aca73dbc650ff3 384 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 30 237 3.5E-89 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 MC28_0021 77f9dd11972599d449aca73dbc650ff3 384 Gene3D G3DSA:3.40.50.620 239 379 4.5E-11 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_0021 77f9dd11972599d449aca73dbc650ff3 384 Pfam PF00582 Universal stress protein family 254 372 1.3E-10 T 14-10-2018 IPR006016 UspA MC28_0021 77f9dd11972599d449aca73dbc650ff3 384 Gene3D G3DSA:3.40.50.300 27 237 3.0E-88 T 14-10-2018 MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 Pfam PF00557 Metallopeptidase family M24 136 336 7.1E-68 T 14-10-2018 IPR000994 Peptidase M24 MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 SUPERFAMILY SSF55920 83 348 9.29E-85 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 SUPERFAMILY SSF53092 2 125 2.04E-22 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 Gene3D G3DSA:3.90.230.10 126 353 1.5E-88 T 14-10-2018 MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 2.8E-24 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 Gene3D G3DSA:3.40.350.10 1 125 9.5E-36 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 6.3E-7 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 6.3E-7 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_3491 14d8ca13c5142e5a1e98969661323a91 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 185 198 6.3E-7 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_2349 77dec1596987aab20ac10043082635fe 101 Gene3D G3DSA:3.30.70.100 1 101 1.1E-40 T 14-10-2018 MC28_2349 77dec1596987aab20ac10043082635fe 101 Pfam PF08803 Putative mono-oxygenase ydhR 4 98 1.1E-40 T 14-10-2018 IPR014910 Putative monooxygenase YdhR MC28_2349 77dec1596987aab20ac10043082635fe 101 SUPERFAMILY SSF54909 3 96 1.5E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_3382 bf064f38982c7661f8502fc34dec13a5 296 Pfam PF00589 Phage integrase family 110 282 3.8E-56 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_3382 bf064f38982c7661f8502fc34dec13a5 296 SUPERFAMILY SSF56349 3 288 4.71E-63 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_3382 bf064f38982c7661f8502fc34dec13a5 296 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 296 62.891 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 MC28_3382 bf064f38982c7661f8502fc34dec13a5 296 Gene3D G3DSA:1.10.443.10 110 290 3.3E-70 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_3382 bf064f38982c7661f8502fc34dec13a5 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 6.1E-22 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_3382 bf064f38982c7661f8502fc34dec13a5 296 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 296 7.6E-126 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 MC28_3382 bf064f38982c7661f8502fc34dec13a5 296 Gene3D G3DSA:1.10.150.130 2 98 5.5E-23 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_3382 bf064f38982c7661f8502fc34dec13a5 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 296 59.167 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD MC28_3382 bf064f38982c7661f8502fc34dec13a5 296 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 6 296 5.1E-103 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 MC28_4861 c8a7041c43fdae717a7f545004e6f707 203 SMART SM01251 17 196 1.3E-120 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 MC28_4861 c8a7041c43fdae717a7f545004e6f707 203 PIRSF PIRSF029886 1 199 5.4E-78 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 MC28_4861 c8a7041c43fdae717a7f545004e6f707 203 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 195 5.3E-80 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 MC28_0585 fa7f152f6a9a80942f9b92223b0c224c 449 Pfam PF00324 Amino acid permease 17 400 1.6E-36 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_0585 fa7f152f6a9a80942f9b92223b0c224c 449 PIRSF PIRSF006060 1 443 9.7E-74 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_0585 fa7f152f6a9a80942f9b92223b0c224c 449 Gene3D G3DSA:1.20.1740.10 7 441 5.3E-75 T 14-10-2018 MC28_0053 495be6206281b6b2b01e0b925d1f6d73 119 Gene3D G3DSA:3.40.250.10 26 119 3.6E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0053 495be6206281b6b2b01e0b925d1f6d73 119 SUPERFAMILY SSF52821 8 118 4.06E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0053 495be6206281b6b2b01e0b925d1f6d73 119 SMART SM00450 30 119 1.4E-16 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0053 495be6206281b6b2b01e0b925d1f6d73 119 Pfam PF00581 Rhodanese-like domain 33 118 9.0E-15 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 SUPERFAMILY SSF53720 27 470 1.13E-78 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 PIRSF PIRSF000111 14 877 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 Gene3D G3DSA:3.40.50.1970 467 659 4.1E-64 T 14-10-2018 MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 SUPERFAMILY SSF56796 465 876 1.7E-126 T 14-10-2018 MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 Pfam PF00465 Iron-containing alcohol dehydrogenase 474 861 1.4E-120 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 648 676 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 Gene3D G3DSA:1.20.1090.10 661 877 2.3E-72 T 14-10-2018 MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 Gene3D G3DSA:3.40.605.10 28 461 6.8E-184 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 Gene3D G3DSA:3.40.309.10 237 422 6.8E-184 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_F046 88120b84b54f87e6ba52414f20d0eef1 877 Pfam PF00171 Aldehyde dehydrogenase family 25 419 2.3E-22 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_4471 bba3905f516c9c87f2b4f41935b7208c 241 SUPERFAMILY SSF55073 121 217 2.12E-5 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_4471 bba3905f516c9c87f2b4f41935b7208c 241 Pfam PF00990 Diguanylate cyclase, GGDEF domain 121 215 9.9E-5 T 14-10-2018 IPR000160 GGDEF domain MC28_4471 bba3905f516c9c87f2b4f41935b7208c 241 Gene3D G3DSA:3.30.70.270 102 232 8.0E-7 T 14-10-2018 MC28_G100 86d4cfc66d84fcf52624b6698b886bb8 68 Gene3D G3DSA:1.10.260.40 1 65 5.4E-25 T 14-10-2018 MC28_G100 86d4cfc66d84fcf52624b6698b886bb8 68 Pfam PF01381 Helix-turn-helix 6 58 1.7E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G100 86d4cfc66d84fcf52624b6698b886bb8 68 SMART SM00530 4 59 2.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G100 86d4cfc66d84fcf52624b6698b886bb8 68 SUPERFAMILY SSF47413 2 63 6.44E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2518 d10a376da6262dccbe6d65731055cd87 317 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 9 314 2.4E-122 T 14-10-2018 IPR020020 Luciferase-type oxidoreductase MC28_2518 d10a376da6262dccbe6d65731055cd87 317 Gene3D G3DSA:3.20.20.30 1 317 1.2E-127 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_2518 d10a376da6262dccbe6d65731055cd87 317 SUPERFAMILY SSF51679 21 315 8.64E-59 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_2518 d10a376da6262dccbe6d65731055cd87 317 Pfam PF00296 Luciferase-like monooxygenase 21 234 5.7E-39 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MC28_F052 9822f1b5438182e17418ff791fa8e189 235 Gene3D G3DSA:3.40.50.150 10 218 2.4E-29 T 14-10-2018 MC28_F052 9822f1b5438182e17418ff791fa8e189 235 Pfam PF13489 Methyltransferase domain 18 164 6.6E-9 T 14-10-2018 MC28_F052 9822f1b5438182e17418ff791fa8e189 235 SUPERFAMILY SSF53335 3 235 4.22E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_F052 9822f1b5438182e17418ff791fa8e189 235 Gene3D G3DSA:2.20.25.110 139 193 2.4E-29 T 14-10-2018 MC28_3472 83fe6d9929943b1e68a3c35a263235fb 452 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 3 441 30.268 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 MC28_3472 83fe6d9929943b1e68a3c35a263235fb 452 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 7 353 2.1E-140 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 MC28_3472 83fe6d9929943b1e68a3c35a263235fb 452 Pfam PF02601 Exonuclease VII, large subunit 124 438 6.1E-98 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 MC28_3472 83fe6d9929943b1e68a3c35a263235fb 452 Pfam PF13742 OB-fold nucleic acid binding domain 6 101 7.7E-33 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 MC28_3580 d5c3902ccc698512fc77c461db81e0ab 316 Gene3D G3DSA:3.40.1010.20 7 284 4.9E-95 T 14-10-2018 MC28_3580 d5c3902ccc698512fc77c461db81e0ab 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 9.1E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 MC28_3580 d5c3902ccc698512fc77c461db81e0ab 316 Pfam PF02401 LytB protein 4 284 4.3E-81 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 MC28_3580 d5c3902ccc698512fc77c461db81e0ab 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 31.939 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 MC28_3580 d5c3902ccc698512fc77c461db81e0ab 316 Gene3D G3DSA:3.40.1010.20 104 197 4.9E-95 T 14-10-2018 MC28_3580 d5c3902ccc698512fc77c461db81e0ab 316 Gene3D G3DSA:3.40.50.11270 12 103 4.9E-95 T 14-10-2018 MC28_3154 edc9fd7380e387704d1fbce97df4c434 141 Pfam PF05105 Bacteriophage holin family 18 127 5.6E-39 T 14-10-2018 IPR006480 Bacteriophage holin family MC28_3154 edc9fd7380e387704d1fbce97df4c434 141 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 13 137 4.2E-30 T 14-10-2018 IPR006480 Bacteriophage holin family MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 SUPERFAMILY SSF55874 257 398 9.56E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 Gene3D G3DSA:3.30.565.10 247 399 1.3E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 Gene3D G3DSA:1.10.287.130 176 246 1.2E-17 T 14-10-2018 MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 248 1.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 SMART SM00388 186 252 1.8E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 378 2.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 397 2.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 345 2.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 359 2.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 398 1.8E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 Pfam PF07694 5TMR of 5TMR-LYT 16 165 2.3E-12 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 SUPERFAMILY SSF47384 182 250 4.9E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 SMART SM00387 294 400 1.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0570 a7a586ed11fd94a83e41ad3c579230fb 402 Gene3D G3DSA:1.10.1760.20 18 175 2.0E-5 T 14-10-2018 MC28_1836 56d81476b1e78795d752178a0a71396a 194 Pfam PF05995 Cysteine dioxygenase type I 15 172 3.0E-6 T 14-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 MC28_1836 56d81476b1e78795d752178a0a71396a 194 SUPERFAMILY SSF51182 10 191 4.01E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_1836 56d81476b1e78795d752178a0a71396a 194 Gene3D G3DSA:2.60.120.10 48 192 2.6E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_1180 74dfb932a8693d3f7604eb8904ff7f46 273 Gene3D G3DSA:3.20.20.370 25 261 3.3E-65 T 14-10-2018 MC28_1180 74dfb932a8693d3f7604eb8904ff7f46 273 SUPERFAMILY SSF88713 63 264 1.61E-55 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_1180 74dfb932a8693d3f7604eb8904ff7f46 273 Pfam PF01522 Polysaccharide deacetylase 64 170 5.9E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_3075 072b152220e1b0171937736d75a64d70 314 SUPERFAMILY SSF52151 4 307 4.45E-80 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MC28_3075 072b152220e1b0171937736d75a64d70 314 Gene3D G3DSA:3.30.70.250 126 199 4.8E-98 T 14-10-2018 MC28_3075 072b152220e1b0171937736d75a64d70 314 Gene3D G3DSA:3.40.366.10 6 285 4.8E-98 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 MC28_3075 072b152220e1b0171937736d75a64d70 314 SUPERFAMILY SSF55048 128 193 5.62E-14 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding MC28_3075 072b152220e1b0171937736d75a64d70 314 Pfam PF00698 Acyl transferase domain 6 283 6.6E-42 T 14-10-2018 IPR014043 Acyl transferase MC28_3075 072b152220e1b0171937736d75a64d70 314 PIRSF PIRSF000446 1 311 1.5E-116 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 MC28_3075 072b152220e1b0171937736d75a64d70 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 289 4.6E-112 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 MC28_3075 072b152220e1b0171937736d75a64d70 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 314 4.5E-51 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 SMART SM00354 2 72 1.2E-39 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 Gene3D G3DSA:3.40.50.2300 63 310 1.4E-93 T 14-10-2018 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 SUPERFAMILY SSF53822 62 332 1.35E-90 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 Gene3D G3DSA:3.40.50.2300 161 291 1.4E-93 T 14-10-2018 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 TIGRFAM TIGR01481 ccpA: catabolite control protein A 1 332 1.6E-165 T 14-10-2018 IPR006377 Catabolite control protein A GO:0006355 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.8E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 Gene3D G3DSA:1.10.260.40 1 60 2.8E-29 T 14-10-2018 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 Pfam PF13377 Periplasmic binding protein-like domain 170 331 2.4E-36 T 14-10-2018 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 SUPERFAMILY SSF47413 2 60 8.44E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 4.3E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3956 08941968f66159ac3e27dab6325fd5b4 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 4.3E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_D148 c362c6068e97ed54ca736314997edb91 715 SMART SM00437 275 556 3.6E-70 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 MC28_D148 c362c6068e97ed54ca736314997edb91 715 Gene3D G3DSA:3.40.50.140 2 159 3.3E-50 T 14-10-2018 MC28_D148 c362c6068e97ed54ca736314997edb91 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 104 117 3.4E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D148 c362c6068e97ed54ca736314997edb91 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 3.4E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D148 c362c6068e97ed54ca736314997edb91 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 317 326 3.4E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D148 c362c6068e97ed54ca736314997edb91 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 3.4E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D148 c362c6068e97ed54ca736314997edb91 715 Pfam PF01751 Toprim domain 3 139 1.2E-17 T 14-10-2018 IPR006171 TOPRIM domain MC28_D148 c362c6068e97ed54ca736314997edb91 715 SMART SM00436 131 226 2.1E-33 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 MC28_D148 c362c6068e97ed54ca736314997edb91 715 SMART SM00493 2 130 2.8E-16 T 14-10-2018 IPR006171 TOPRIM domain MC28_D148 c362c6068e97ed54ca736314997edb91 715 Gene3D G3DSA:1.10.460.10 165 601 2.1E-133 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MC28_D148 c362c6068e97ed54ca736314997edb91 715 Gene3D G3DSA:2.70.20.10 220 486 2.1E-133 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MC28_D148 c362c6068e97ed54ca736314997edb91 715 Pfam PF01131 DNA topoisomerase 159 590 3.1E-98 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_D148 c362c6068e97ed54ca736314997edb91 715 Gene3D G3DSA:1.10.290.10 284 412 2.1E-133 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MC28_D148 c362c6068e97ed54ca736314997edb91 715 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 326 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 MC28_D148 c362c6068e97ed54ca736314997edb91 715 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 701 8.0E-184 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 MC28_D148 c362c6068e97ed54ca736314997edb91 715 SUPERFAMILY SSF56712 3 604 9.29E-162 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain MC28_D148 c362c6068e97ed54ca736314997edb91 715 Pfam PF13342 C-terminal repeat of topoisomerase 652 710 2.1E-14 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat MC28_4835 838014a6516f342b9c6fb64846744c8a 56 SUPERFAMILY SSF57716 2 56 1.71E-21 T 14-10-2018 MC28_4835 838014a6516f342b9c6fb64846744c8a 56 Pfam PF00253 Ribosomal protein S14p/S29e 4 55 2.5E-25 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4835 838014a6516f342b9c6fb64846744c8a 56 Gene3D G3DSA:4.10.830.10 1 56 2.5E-29 T 14-10-2018 MC28_4835 838014a6516f342b9c6fb64846744c8a 56 ProSitePatterns PS00527 Ribosomal protein S14 signature. 18 40 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_1275 0aa21d30de73308240c0fe96129afb0c 109 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 4 108 1.1E-46 T 14-10-2018 IPR008231 Probable chaperone CsaA MC28_1275 0aa21d30de73308240c0fe96129afb0c 109 Pfam PF01588 Putative tRNA binding domain 12 107 1.9E-15 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 MC28_1275 0aa21d30de73308240c0fe96129afb0c 109 SUPERFAMILY SSF50249 2 108 6.61E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_1275 0aa21d30de73308240c0fe96129afb0c 109 Gene3D G3DSA:2.40.50.140 1 109 1.5E-28 T 14-10-2018 MC28_G006 4961259451aabc7813881b02f6ff5422 333 SMART SM00354 2 72 1.6E-36 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_G006 4961259451aabc7813881b02f6ff5422 333 SUPERFAMILY SSF53822 62 330 6.87E-79 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_G006 4961259451aabc7813881b02f6ff5422 333 Gene3D G3DSA:3.40.50.2300 161 326 1.0E-77 T 14-10-2018 MC28_G006 4961259451aabc7813881b02f6ff5422 333 Gene3D G3DSA:3.40.50.2300 63 321 1.0E-77 T 14-10-2018 MC28_G006 4961259451aabc7813881b02f6ff5422 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 6.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_G006 4961259451aabc7813881b02f6ff5422 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 6.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_G006 4961259451aabc7813881b02f6ff5422 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 MC28_G006 4961259451aabc7813881b02f6ff5422 333 SUPERFAMILY SSF47413 2 60 1.15E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_G006 4961259451aabc7813881b02f6ff5422 333 Pfam PF13377 Periplasmic binding protein-like domain 170 329 5.3E-32 T 14-10-2018 MC28_G006 4961259451aabc7813881b02f6ff5422 333 Gene3D G3DSA:1.10.260.40 1 60 2.7E-22 T 14-10-2018 MC28_G006 4961259451aabc7813881b02f6ff5422 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.0E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_5012 72be67648f1bca73a0d88719ac5af545 195 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 188 2.2E-71 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 MC28_5012 72be67648f1bca73a0d88719ac5af545 195 Pfam PF00551 Formyl transferase 3 182 1.1E-60 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MC28_5012 72be67648f1bca73a0d88719ac5af545 195 SUPERFAMILY SSF53328 3 187 8.63E-62 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MC28_5012 72be67648f1bca73a0d88719ac5af545 195 Gene3D G3DSA:3.40.50.170 1 195 2.5E-74 T 14-10-2018 MC28_5012 72be67648f1bca73a0d88719ac5af545 195 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MC28_5012 72be67648f1bca73a0d88719ac5af545 195 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.652 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 MC28_0858 c4abecef8cc2f285020ede1051b54a0b 277 SMART SM00422 7 77 2.2E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0858 c4abecef8cc2f285020ede1051b54a0b 277 Pfam PF13411 MerR HTH family regulatory protein 7 76 9.4E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0858 c4abecef8cc2f285020ede1051b54a0b 277 Pfam PF06445 GyrI-like small molecule binding domain 208 273 5.1E-10 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain MC28_0858 c4abecef8cc2f285020ede1051b54a0b 277 Gene3D G3DSA:3.20.80.10 200 276 3.3E-14 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_0858 c4abecef8cc2f285020ede1051b54a0b 277 SMART SM00871 123 274 1.1E-10 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding MC28_0858 c4abecef8cc2f285020ede1051b54a0b 277 SUPERFAMILY SSF46955 6 111 1.06E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_0858 c4abecef8cc2f285020ede1051b54a0b 277 SUPERFAMILY SSF55136 125 274 3.14E-40 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_0858 c4abecef8cc2f285020ede1051b54a0b 277 Gene3D G3DSA:1.10.1660.10 4 140 7.4E-28 T 14-10-2018 MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 Gene3D G3DSA:1.10.287.130 367 444 3.2E-18 T 14-10-2018 MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 SUPERFAMILY SSF158472 308 359 1.24E-6 T 14-10-2018 MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 Gene3D G3DSA:1.20.1480.50 275 366 3.6E-9 T 14-10-2018 MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 SMART SM00387 484 595 7.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 592 6.8E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 SUPERFAMILY SSF55874 429 591 6.55E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 Gene3D G3DSA:3.30.565.10 445 595 4.7E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 SMART SM00388 375 440 9.6E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 SUPERFAMILY SSF47384 361 440 1.96E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 SMART SM00304 308 360 3.2E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G070 523e13b3e22544709f5c641b6e945d4d 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 376 440 4.2E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4455 2ec5ab2629e3c6e3eba3f97c08046c17 294 SUPERFAMILY SSF46785 1 86 1.21E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4455 2ec5ab2629e3c6e3eba3f97c08046c17 294 Gene3D G3DSA:3.40.190.290 92 293 1.1E-50 T 14-10-2018 MC28_4455 2ec5ab2629e3c6e3eba3f97c08046c17 294 Pfam PF03466 LysR substrate binding domain 99 288 5.8E-40 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_4455 2ec5ab2629e3c6e3eba3f97c08046c17 294 Gene3D G3DSA:1.10.10.10 1 87 8.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4455 2ec5ab2629e3c6e3eba3f97c08046c17 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_4455 2ec5ab2629e3c6e3eba3f97c08046c17 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_4455 2ec5ab2629e3c6e3eba3f97c08046c17 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_4455 2ec5ab2629e3c6e3eba3f97c08046c17 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 3.7E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_4455 2ec5ab2629e3c6e3eba3f97c08046c17 294 SUPERFAMILY SSF53850 99 292 4.03E-37 T 14-10-2018 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Gene3D G3DSA:4.10.860.10 410 468 6.3E-53 T 14-10-2018 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 SUPERFAMILY SSF52540 487 804 1.62E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 SMART SM00382 538 682 7.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 SMART SM00382 201 345 4.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Pfam PF02151 UvrB/uvrC motif 419 452 3.9E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Gene3D G3DSA:1.10.8.60 715 811 3.3E-28 T 14-10-2018 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Gene3D G3DSA:1.10.8.60 347 482 6.3E-53 T 14-10-2018 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 587 605 7.2E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 663 7.2E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 542 560 7.2E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 7.2E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 SMART SM01086 715 804 1.3E-38 T 14-10-2018 IPR019489 Clp ATPase, C-terminal MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 SUPERFAMILY SSF81923 5 150 6.91E-33 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 318 1.8E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 715 793 1.5E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Gene3D G3DSA:1.10.1780.10 1 150 9.8E-62 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 SUPERFAMILY SSF52540 162 470 6.58E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Pfam PF07724 AAA domain (Cdc48 subfamily) 537 709 3.5E-58 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 572 590 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 2.0E-18 T 14-10-2018 IPR004176 Clp, N-terminal MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 69 4.4E-15 T 14-10-2018 IPR004176 Clp, N-terminal MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Gene3D G3DSA:3.40.50.300 491 713 2.0E-90 T 14-10-2018 MC28_4794 ef9e3b51d6859039ab605d9ba915aa62 811 Gene3D G3DSA:3.40.50.300 153 344 4.3E-72 T 14-10-2018 MC28_0263 7817b6dc7ad4f2fa6a330660317e4e78 283 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 1.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0263 7817b6dc7ad4f2fa6a330660317e4e78 283 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 1.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0263 7817b6dc7ad4f2fa6a330660317e4e78 283 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 98 1.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0263 7817b6dc7ad4f2fa6a330660317e4e78 283 Gene3D G3DSA:3.40.50.1820 24 282 2.2E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0263 7817b6dc7ad4f2fa6a330660317e4e78 283 Pfam PF00561 alpha/beta hydrolase fold 191 266 2.1E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0263 7817b6dc7ad4f2fa6a330660317e4e78 283 Pfam PF00561 alpha/beta hydrolase fold 58 157 3.8E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0263 7817b6dc7ad4f2fa6a330660317e4e78 283 SUPERFAMILY SSF53474 31 278 1.2E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0114 a4d50ff80c409ad89678404eab800680 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 48 2.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0114 a4d50ff80c409ad89678404eab800680 192 SUPERFAMILY SSF46689 3 62 1.3E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_0114 a4d50ff80c409ad89678404eab800680 192 Gene3D G3DSA:1.10.357.10 1 190 3.1E-53 T 14-10-2018 MC28_0114 a4d50ff80c409ad89678404eab800680 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 9.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0114 a4d50ff80c409ad89678404eab800680 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 9.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0114 a4d50ff80c409ad89678404eab800680 192 SUPERFAMILY SSF48498 76 187 1.22E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_1295 e5a55688f933594b8cdf4e75bcb7b272 281 PIRSF PIRSF006483 1 274 4.4E-67 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_1295 e5a55688f933594b8cdf4e75bcb7b272 281 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 7 209 1.2E-54 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_1295 e5a55688f933594b8cdf4e75bcb7b272 281 Gene3D G3DSA:3.30.70.120 187 261 1.1E-19 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_1295 e5a55688f933594b8cdf4e75bcb7b272 281 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 267 3.6E-12 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_0347 e6898d5f618e4b612b8e3fece31ba23c 516 PIRSF PIRSF001363 1 516 9.6E-264 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 MC28_0347 e6898d5f618e4b612b8e3fece31ba23c 516 ProSitePatterns PS00510 Malate synthase signature. 250 265 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 MC28_0347 e6898d5f618e4b612b8e3fece31ba23c 516 Pfam PF01274 Malate synthase 5 514 3.2E-215 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 MC28_0347 e6898d5f618e4b612b8e3fece31ba23c 516 SUPERFAMILY SSF51645 3 515 2.49E-198 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 MC28_0347 e6898d5f618e4b612b8e3fece31ba23c 516 Gene3D G3DSA:3.20.20.360 1 394 1.1E-202 T 14-10-2018 MC28_0347 e6898d5f618e4b612b8e3fece31ba23c 516 Gene3D G3DSA:1.20.1220.12 395 516 4.1E-51 T 14-10-2018 MC28_0347 e6898d5f618e4b612b8e3fece31ba23c 516 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 8 516 2.0E-253 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 MC28_0704 73934c00a9161bc44aecd50d72ae4128 378 Gene3D G3DSA:2.30.140.30 270 353 1.8E-9 T 14-10-2018 MC28_0704 73934c00a9161bc44aecd50d72ae4128 378 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 253 8.7E-67 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MC28_0704 73934c00a9161bc44aecd50d72ae4128 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 2.6E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_0704 73934c00a9161bc44aecd50d72ae4128 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 150 2.6E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_0704 73934c00a9161bc44aecd50d72ae4128 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 2.6E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_0704 73934c00a9161bc44aecd50d72ae4128 378 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 270 350 5.4E-7 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_0704 73934c00a9161bc44aecd50d72ae4128 378 SUPERFAMILY SSF56601 5 268 5.12E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_0704 73934c00a9161bc44aecd50d72ae4128 378 Gene3D G3DSA:3.40.710.10 34 269 1.5E-86 T 14-10-2018 MC28_5308 4f8155363580f395e023e962e2803fee 223 Pfam PF00072 Response regulator receiver domain 4 113 2.8E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5308 4f8155363580f395e023e962e2803fee 223 Gene3D G3DSA:1.10.10.10 123 223 2.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5308 4f8155363580f395e023e962e2803fee 223 SMART SM00448 2 112 3.8E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5308 4f8155363580f395e023e962e2803fee 223 Gene3D G3DSA:3.40.50.2300 2 122 8.2E-40 T 14-10-2018 MC28_5308 4f8155363580f395e023e962e2803fee 223 SUPERFAMILY SSF46894 120 221 5.67E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_5308 4f8155363580f395e023e962e2803fee 223 SUPERFAMILY SSF52172 1 120 2.85E-42 T 14-10-2018 IPR011006 CheY-like superfamily MC28_5308 4f8155363580f395e023e962e2803fee 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 219 3.0E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_5308 4f8155363580f395e023e962e2803fee 223 SMART SM00862 143 220 2.7E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_5243 a5bfe428ccffbb3418bd455b863b8520 105 Gene3D G3DSA:1.10.287.880 1 52 4.4E-25 T 14-10-2018 MC28_5243 a5bfe428ccffbb3418bd455b863b8520 105 SUPERFAMILY SSF101697 3 105 1.96E-45 T 14-10-2018 IPR036289 Hypothetical protein YfhH MC28_5243 a5bfe428ccffbb3418bd455b863b8520 105 Pfam PF08838 Protein of unknown function (DUF1811) 5 103 3.7E-40 T 14-10-2018 IPR014938 Protein of unknown function DUF1811 MC28_5243 a5bfe428ccffbb3418bd455b863b8520 105 Gene3D G3DSA:2.30.30.340 54 105 7.5E-20 T 14-10-2018 MC28_2042 689b6f55f4b83631c24021804c45c743 144 Pfam PF14106 Domain of unknown function (DUF4279) 14 132 8.7E-30 T 14-10-2018 IPR025459 Protein of unknown function DUF4279 MC28_2106 c25bf93b517f0d870406215b2f49b0b3 328 Gene3D G3DSA:1.10.8.450 247 280 4.5E-93 T 14-10-2018 MC28_2106 c25bf93b517f0d870406215b2f49b0b3 328 Pfam PF09084 NMT1/THI5 like 44 248 1.2E-28 T 14-10-2018 IPR015168 SsuA/THI5-like MC28_2106 c25bf93b517f0d870406215b2f49b0b3 328 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 35 321 4.1E-91 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 MC28_2106 c25bf93b517f0d870406215b2f49b0b3 328 Gene3D G3DSA:3.40.190.10 35 311 4.5E-93 T 14-10-2018 MC28_2106 c25bf93b517f0d870406215b2f49b0b3 328 SUPERFAMILY SSF53850 31 258 4.86E-52 T 14-10-2018 MC28_2106 c25bf93b517f0d870406215b2f49b0b3 328 Gene3D G3DSA:3.40.190.10 115 214 4.5E-93 T 14-10-2018 MC28_2106 c25bf93b517f0d870406215b2f49b0b3 328 SMART SM00062 34 256 1.6E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_0807 2e87027af5a3ec73c058d008a82f9f87 455 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 42 440 2.1E-64 T 14-10-2018 IPR021145 Portal protein MC28_4717 8be11c7cf0b3feaa0b3c9587eebfc644 205 Pfam PF01424 R3H domain 145 203 7.1E-17 T 14-10-2018 IPR001374 R3H domain GO:0003676 MC28_4717 8be11c7cf0b3feaa0b3c9587eebfc644 205 Gene3D G3DSA:3.30.30.80 1 57 5.8E-19 T 14-10-2018 IPR038247 Jag, N-terminal domain superfamily MC28_4717 8be11c7cf0b3feaa0b3c9587eebfc644 205 SMART SM01245 5 57 7.1E-23 T 14-10-2018 IPR032782 Jag, N-terminal MC28_4717 8be11c7cf0b3feaa0b3c9587eebfc644 205 SMART SM00393 126 205 4.2E-22 T 14-10-2018 IPR001374 R3H domain GO:0003676 MC28_4717 8be11c7cf0b3feaa0b3c9587eebfc644 205 Gene3D G3DSA:3.30.1370.50 141 205 3.0E-26 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 MC28_4717 8be11c7cf0b3feaa0b3c9587eebfc644 205 Pfam PF14804 Jag N-terminus 7 55 1.1E-19 T 14-10-2018 IPR032782 Jag, N-terminal MC28_4717 8be11c7cf0b3feaa0b3c9587eebfc644 205 Gene3D G3DSA:3.30.300.20 59 140 1.9E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_4717 8be11c7cf0b3feaa0b3c9587eebfc644 205 Pfam PF13083 KH domain 64 128 7.5E-17 T 14-10-2018 MC28_4717 8be11c7cf0b3feaa0b3c9587eebfc644 205 SUPERFAMILY SSF82708 151 204 4.58E-11 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 MC28_1750 51dbb55ad45ae13d94ca56351155832f 338 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 1.2E-11 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_1750 51dbb55ad45ae13d94ca56351155832f 338 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 61 72 1.2E-11 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_1750 51dbb55ad45ae13d94ca56351155832f 338 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 1.2E-11 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_1750 51dbb55ad45ae13d94ca56351155832f 338 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 266 1.3E-54 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MC28_1750 51dbb55ad45ae13d94ca56351155832f 338 SUPERFAMILY SSF56601 4 284 1.57E-55 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1750 51dbb55ad45ae13d94ca56351155832f 338 Gene3D G3DSA:3.40.710.10 25 284 2.2E-67 T 14-10-2018 MC28_1787 1e6899585dd3f3a7ea61abe3aac5d9e4 210 Pfam PF01965 DJ-1/PfpI family 4 176 1.4E-31 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 MC28_1787 1e6899585dd3f3a7ea61abe3aac5d9e4 210 Gene3D G3DSA:3.40.50.880 1 210 1.7E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_1787 1e6899585dd3f3a7ea61abe3aac5d9e4 210 SUPERFAMILY SSF52317 4 178 1.36E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_1065 ba37226940426c39c2d440472c370756 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 37.439 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 MC28_1065 ba37226940426c39c2d440472c370756 223 PIRSF PIRSF001357 1 223 1.3E-80 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 MC28_1065 ba37226940426c39c2d440472c370756 223 SMART SM01133 2 214 2.7E-105 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 MC28_1065 ba37226940426c39c2d440472c370756 223 Pfam PF01791 DeoC/LacD family aldolase 4 205 6.4E-23 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 MC28_1065 ba37226940426c39c2d440472c370756 223 SUPERFAMILY SSF51569 1 214 2.3E-83 T 14-10-2018 MC28_1065 ba37226940426c39c2d440472c370756 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 211 3.8E-93 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 MC28_1065 ba37226940426c39c2d440472c370756 223 Gene3D G3DSA:3.20.20.70 1 218 1.3E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4749 6583d743164e8737c990e57849e59430 246 Pfam PF13649 Methyltransferase domain 49 129 3.8E-7 T 14-10-2018 MC28_4749 6583d743164e8737c990e57849e59430 246 SUPERFAMILY SSF53335 13 197 1.24E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4749 6583d743164e8737c990e57849e59430 246 Gene3D G3DSA:3.40.50.150 7 246 6.9E-71 T 14-10-2018 MC28_D063 fe9f71c7036cdff3cbdeec47724fd074 381 SUPERFAMILY SSF53271 273 331 5.24E-9 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_D063 fe9f71c7036cdff3cbdeec47724fd074 381 Gene3D G3DSA:3.40.50.2020 232 340 1.2E-7 T 14-10-2018 MC28_3733 e54b0ef9139eb13d2c85163923fb147e 182 SMART SM01317 59 171 1.2E-59 T 14-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal MC28_3733 e54b0ef9139eb13d2c85163923fb147e 182 Gene3D G3DSA:1.10.287.130 1 57 2.3E-20 T 14-10-2018 MC28_3733 e54b0ef9139eb13d2c85163923fb147e 182 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 60 169 1.0E-36 T 14-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal MC28_3733 e54b0ef9139eb13d2c85163923fb147e 182 Gene3D G3DSA:3.30.565.30 58 174 2.2E-30 T 14-10-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily MC28_3733 e54b0ef9139eb13d2c85163923fb147e 182 SUPERFAMILY SSF55890 2 173 3.4E-61 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 MC28_3733 e54b0ef9139eb13d2c85163923fb147e 182 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 5 56 3.5E-17 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain MC28_1047 8316c808c5dcb6878430dd8d5465880c 534 Gene3D G3DSA:3.90.76.10 60 182 1.2E-175 T 14-10-2018 MC28_1047 8316c808c5dcb6878430dd8d5465880c 534 PIRSF PIRSF002741 1 534 2.1E-111 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_1047 8316c808c5dcb6878430dd8d5465880c 534 Gene3D G3DSA:3.10.105.10 282 504 1.2E-175 T 14-10-2018 MC28_1047 8316c808c5dcb6878430dd8d5465880c 534 Gene3D G3DSA:3.40.190.10 41 521 1.2E-175 T 14-10-2018 MC28_1047 8316c808c5dcb6878430dd8d5465880c 534 SUPERFAMILY SSF53850 23 528 1.25E-128 T 14-10-2018 MC28_1047 8316c808c5dcb6878430dd8d5465880c 534 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 452 3.9E-78 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_0565 e4b58155556f67e92cab15a01242c471 478 Gene3D G3DSA:3.30.450.20 26 205 6.7E-34 T 14-10-2018 MC28_0565 e4b58155556f67e92cab15a01242c471 478 Gene3D G3DSA:3.30.450.20 54 153 6.7E-34 T 14-10-2018 MC28_0565 e4b58155556f67e92cab15a01242c471 478 SUPERFAMILY SSF47384 254 325 1.53E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_0565 e4b58155556f67e92cab15a01242c471 478 SMART SM00388 264 329 1.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0565 e4b58155556f67e92cab15a01242c471 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 8.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0565 e4b58155556f67e92cab15a01242c471 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 8.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0565 e4b58155556f67e92cab15a01242c471 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 8.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0565 e4b58155556f67e92cab15a01242c471 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 8.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0565 e4b58155556f67e92cab15a01242c471 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 476 2.5E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0565 e4b58155556f67e92cab15a01242c471 478 Gene3D G3DSA:1.10.287.130 248 327 2.8E-16 T 14-10-2018 MC28_0565 e4b58155556f67e92cab15a01242c471 478 Gene3D G3DSA:3.30.565.10 329 478 1.4E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0565 e4b58155556f67e92cab15a01242c471 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 326 1.6E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_0565 e4b58155556f67e92cab15a01242c471 478 SMART SM00387 371 477 4.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0565 e4b58155556f67e92cab15a01242c471 478 SUPERFAMILY SSF55874 326 475 2.49E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0565 e4b58155556f67e92cab15a01242c471 478 Pfam PF02743 Cache domain 57 184 1.2E-13 T 14-10-2018 IPR033479 Double Cache domain 1 MC28_4532 62e2e1b593292cf51a2c624976efecc8 139 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 7 122 1.7E-34 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4532 62e2e1b593292cf51a2c624976efecc8 139 Pfam PF12838 4Fe-4S dicluster domain 45 102 3.2E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MC28_4532 62e2e1b593292cf51a2c624976efecc8 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 46 57 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MC28_4532 62e2e1b593292cf51a2c624976efecc8 139 SUPERFAMILY SSF54862 24 125 3.81E-24 T 14-10-2018 MC28_4532 62e2e1b593292cf51a2c624976efecc8 139 Gene3D G3DSA:3.30.70.3270 24 139 1.0E-32 T 14-10-2018 MC28_4532 62e2e1b593292cf51a2c624976efecc8 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MC28_0633 489912ac30cc21c264a3ddebb10c2fe3 298 SUPERFAMILY SSF56752 4 291 9.03E-93 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 MC28_0633 489912ac30cc21c264a3ddebb10c2fe3 298 Gene3D G3DSA:3.20.10.10 125 295 1.7E-53 T 14-10-2018 MC28_0633 489912ac30cc21c264a3ddebb10c2fe3 298 Pfam PF01063 Amino-transferase class IV 32 258 3.7E-60 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 MC28_0633 489912ac30cc21c264a3ddebb10c2fe3 298 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 7 289 2.8E-102 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 MC28_0633 489912ac30cc21c264a3ddebb10c2fe3 298 Gene3D G3DSA:3.30.470.10 1 124 1.5E-47 T 14-10-2018 MC28_0633 489912ac30cc21c264a3ddebb10c2fe3 298 ProSitePatterns PS00770 Aminotransferases class-IV signature. 185 214 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 MC28_3821 91ba455cc9889890c124e4f419bc3c75 399 Gene3D G3DSA:3.30.750.80 74 181 4.4E-38 T 14-10-2018 MC28_3821 91ba455cc9889890c124e4f419bc3c75 399 Gene3D G3DSA:2.30.130.10 5 73 1.4E-21 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 MC28_3821 91ba455cc9889890c124e4f419bc3c75 399 Gene3D G3DSA:3.40.50.150 182 398 3.2E-54 T 14-10-2018 MC28_3821 91ba455cc9889890c124e4f419bc3c75 399 SUPERFAMILY SSF88697 6 73 1.37E-20 T 14-10-2018 IPR015947 PUA-like superfamily MC28_3821 91ba455cc9889890c124e4f419bc3c75 399 SUPERFAMILY SSF53335 81 393 1.45E-64 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3821 91ba455cc9889890c124e4f419bc3c75 399 SMART SM00359 5 90 6.9E-4 T 14-10-2018 IPR002478 PUA domain GO:0003723 MC28_3821 91ba455cc9889890c124e4f419bc3c75 399 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 112 381 6.4E-30 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 MC28_0551 f50ffcab2d5a740ed7f55dedb745fd1f 358 Pfam PF13343 Bacterial extracellular solute-binding protein 90 334 1.7E-31 T 14-10-2018 MC28_0551 f50ffcab2d5a740ed7f55dedb745fd1f 358 Gene3D G3DSA:3.40.190.10 44 319 9.2E-91 T 14-10-2018 MC28_0551 f50ffcab2d5a740ed7f55dedb745fd1f 358 PIRSF PIRSF002825 1 351 1.7E-92 T 14-10-2018 IPR026045 Ferric binding protein MC28_0551 f50ffcab2d5a740ed7f55dedb745fd1f 358 Gene3D G3DSA:3.40.190.10 145 325 9.2E-91 T 14-10-2018 MC28_0551 f50ffcab2d5a740ed7f55dedb745fd1f 358 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 8 355 1.3E-161 T 14-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative MC28_0551 f50ffcab2d5a740ed7f55dedb745fd1f 358 SUPERFAMILY SSF53850 42 348 2.28E-71 T 14-10-2018 MC28_G176 44ff3a02e98c2c1b9899db7089138042 388 SUPERFAMILY SSF56601 52 372 2.04E-79 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_G176 44ff3a02e98c2c1b9899db7089138042 388 Gene3D G3DSA:3.40.710.10 47 388 1.8E-143 T 14-10-2018 MC28_G176 44ff3a02e98c2c1b9899db7089138042 388 Pfam PF00144 Beta-lactamase 62 381 6.4E-67 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_1059 a4382ee3170401e62706e646a998566c 608 Gene3D G3DSA:1.20.1740.10 21 465 1.0E-23 T 14-10-2018 MC28_1059 a4382ee3170401e62706e646a998566c 608 Pfam PF13520 Amino acid permease 29 444 1.2E-32 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_0388 8f86339f06b906c110d893cfc246f433 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 263 1.3E-65 T 14-10-2018 MC28_0388 8f86339f06b906c110d893cfc246f433 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 14-10-2018 MC28_0388 8f86339f06b906c110d893cfc246f433 269 SUPERFAMILY SSF56784 2 267 2.81E-68 T 14-10-2018 IPR036412 HAD-like superfamily MC28_0388 8f86339f06b906c110d893cfc246f433 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 263 1.8E-56 T 14-10-2018 IPR000150 Cof family GO:0016787 MC28_0388 8f86339f06b906c110d893cfc246f433 269 Gene3D G3DSA:3.40.50.1000 6 260 3.4E-63 T 14-10-2018 IPR023214 HAD superfamily MC28_0388 8f86339f06b906c110d893cfc246f433 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 7.6E-29 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 MC28_0388 8f86339f06b906c110d893cfc246f433 269 Gene3D G3DSA:3.30.1240.10 86 191 3.4E-63 T 14-10-2018 MC28_3517 a4e7e54a719d5900aacfda38bc52e5e1 491 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 60.599 T 14-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 MC28_3517 a4e7e54a719d5900aacfda38bc52e5e1 491 Gene3D G3DSA:3.90.1150.10 338 470 3.1E-47 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3517 a4e7e54a719d5900aacfda38bc52e5e1 491 SUPERFAMILY SSF53383 22 483 1.41E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3517 a4e7e54a719d5900aacfda38bc52e5e1 491 Pfam PF02347 Glycine cleavage system P-protein 51 300 4.0E-10 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 MC28_3517 a4e7e54a719d5900aacfda38bc52e5e1 491 Gene3D G3DSA:3.40.640.10 86 317 4.1E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3802 a33290c8980c6d607f200976d73fd8ee 244 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 85 105 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 MC28_3802 a33290c8980c6d607f200976d73fd8ee 244 Pfam PF00378 Enoyl-CoA hydratase/isomerase 3 243 1.0E-63 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 MC28_3802 a33290c8980c6d607f200976d73fd8ee 244 SUPERFAMILY SSF52096 2 244 3.25E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_3802 a33290c8980c6d607f200976d73fd8ee 244 Gene3D G3DSA:3.90.226.10 1 244 9.1E-89 T 14-10-2018 MC28_1426 f941ef46f2103fb1240b3d6425571fd6 119 Pfam PF13673 Acetyltransferase (GNAT) domain 11 112 3.6E-6 T 14-10-2018 IPR000182 GNAT domain MC28_1426 f941ef46f2103fb1240b3d6425571fd6 119 Gene3D G3DSA:3.40.630.30 3 119 4.6E-11 T 14-10-2018 MC28_1426 f941ef46f2103fb1240b3d6425571fd6 119 SUPERFAMILY SSF55729 7 112 1.23E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_B31 d4474861d2079a1233ba0de38c2764ed 419 Gene3D G3DSA:3.30.420.40 69 377 3.8E-7 T 14-10-2018 MC28_B31 d4474861d2079a1233ba0de38c2764ed 419 Gene3D G3DSA:3.30.420.40 218 373 3.8E-7 T 14-10-2018 MC28_4360 52e6b8c58fdf0841231c3bca1cfe3173 155 Gene3D G3DSA:2.40.280.10 3 129 2.3E-53 T 14-10-2018 IPR023620 Small protein B MC28_4360 52e6b8c58fdf0841231c3bca1cfe3173 155 SUPERFAMILY SSF74982 4 132 3.53E-55 T 14-10-2018 IPR023620 Small protein B MC28_4360 52e6b8c58fdf0841231c3bca1cfe3173 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 8 149 4.9E-62 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 MC28_4360 52e6b8c58fdf0841231c3bca1cfe3173 155 Pfam PF01668 SmpB protein 9 150 1.3E-64 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 MC28_4360 52e6b8c58fdf0841231c3bca1cfe3173 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site MC28_4360 52e6b8c58fdf0841231c3bca1cfe3173 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 4.0E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 MC28_4360 52e6b8c58fdf0841231c3bca1cfe3173 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 78.256 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 MC28_2238 eb0c17109792bde38e0367ccc877419c 480 SMART SM00345 17 76 2.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2238 eb0c17109792bde38e0367ccc877419c 480 SUPERFAMILY SSF53383 111 475 1.99E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_2238 eb0c17109792bde38e0367ccc877419c 480 SUPERFAMILY SSF46785 6 79 1.82E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2238 eb0c17109792bde38e0367ccc877419c 480 Gene3D G3DSA:3.40.640.10 152 372 1.1E-103 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2238 eb0c17109792bde38e0367ccc877419c 480 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.8E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2238 eb0c17109792bde38e0367ccc877419c 480 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.7E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2238 eb0c17109792bde38e0367ccc877419c 480 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.7E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2238 eb0c17109792bde38e0367ccc877419c 480 Pfam PF00155 Aminotransferase class I and II 128 471 1.4E-33 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_2238 eb0c17109792bde38e0367ccc877419c 480 Gene3D G3DSA:3.90.1150.10 113 475 1.1E-103 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2238 eb0c17109792bde38e0367ccc877419c 480 Gene3D G3DSA:1.10.10.10 3 77 6.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3116 be23bae9bd167336a19754898bfc3196 157 Pfam PF01252 Signal peptidase (SPase) II 11 149 7.4E-40 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 MC28_3116 be23bae9bd167336a19754898bfc3196 157 TIGRFAM TIGR00077 lspA: signal peptidase II 6 156 7.5E-47 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 MC28_3116 be23bae9bd167336a19754898bfc3196 157 ProSitePatterns PS00855 Signal peptidases II signature. 97 109 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 MC28_3116 be23bae9bd167336a19754898bfc3196 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 130 146 2.0E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 MC28_3116 be23bae9bd167336a19754898bfc3196 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 50 58 2.0E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 MC28_3116 be23bae9bd167336a19754898bfc3196 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 94 109 2.0E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 MC28_3116 be23bae9bd167336a19754898bfc3196 157 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 155 17.364 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 MC28_1911 22119906bb1abd1337e29a93a496fa78 374 SUPERFAMILY SSF54373 227 314 8.63E-17 T 14-10-2018 MC28_1911 22119906bb1abd1337e29a93a496fa78 374 Gene3D G3DSA:3.30.9.10 91 314 5.1E-85 T 14-10-2018 MC28_1911 22119906bb1abd1337e29a93a496fa78 374 Gene3D G3DSA:3.50.50.60 8 354 5.1E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1911 22119906bb1abd1337e29a93a496fa78 374 Pfam PF01266 FAD dependent oxidoreductase 7 354 5.2E-56 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MC28_1911 22119906bb1abd1337e29a93a496fa78 374 SUPERFAMILY SSF51905 5 369 2.85E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 Pfam PF01751 Toprim domain 425 536 2.5E-19 T 14-10-2018 IPR006171 TOPRIM domain MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 Gene3D G3DSA:3.30.230.10 226 404 9.3E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 SUPERFAMILY SSF55874 11 219 4.32E-73 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR00418 DNA topoisomerase II family signature 40 55 1.9E-71 T 14-10-2018 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR00418 DNA topoisomerase II family signature 118 132 1.9E-71 T 14-10-2018 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR00418 DNA topoisomerase II family signature 75 88 1.9E-71 T 14-10-2018 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR00418 DNA topoisomerase II family signature 426 440 1.9E-71 T 14-10-2018 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR00418 DNA topoisomerase II family signature 274 287 1.9E-71 T 14-10-2018 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR00418 DNA topoisomerase II family signature 530 542 1.9E-71 T 14-10-2018 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR00418 DNA topoisomerase II family signature 492 508 1.9E-71 T 14-10-2018 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR00418 DNA topoisomerase II family signature 572 588 1.9E-71 T 14-10-2018 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR00418 DNA topoisomerase II family signature 510 527 1.9E-71 T 14-10-2018 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 SMART SM00433 40 633 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 179 5.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 Pfam PF00204 DNA gyrase B 227 396 2.0E-64 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 SUPERFAMILY SSF54211 227 397 6.07E-63 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 Gene3D G3DSA:3.40.50.670 405 640 2.7E-110 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 11 21 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 609 625 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 186 201 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 593 605 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 318 334 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 366 380 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 380 400 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 476 485 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 226 248 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 PRINTS PR01159 DNA gyrase subunit B signature 201 214 1.0E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 Gene3D G3DSA:3.30.565.10 7 225 4.7E-93 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 8 640 101.599 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 SMART SM00387 36 180 4.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 629 7.8E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 11 640 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MC28_4725 bb74aea3ef89623741ee15a51c5a746c 640 SUPERFAMILY SSF56719 400 632 1.2E-91 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 MC28_3040 600bae69d5d3b2823630e0d7e0b3c2c0 164 Gene3D G3DSA:2.30.30.180 96 162 5.8E-24 T 14-10-2018 MC28_3040 600bae69d5d3b2823630e0d7e0b3c2c0 164 Pfam PF17384 RimP C-terminal SH3 domain 95 164 1.9E-22 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal MC28_3040 600bae69d5d3b2823630e0d7e0b3c2c0 164 SUPERFAMILY SSF75420 7 92 1.2E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily MC28_3040 600bae69d5d3b2823630e0d7e0b3c2c0 164 Pfam PF02576 RimP N-terminal domain 21 92 7.4E-28 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal MC28_3040 600bae69d5d3b2823630e0d7e0b3c2c0 164 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 15 164 24.677 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 MC28_3040 600bae69d5d3b2823630e0d7e0b3c2c0 164 Gene3D G3DSA:3.30.300.70 9 89 1.3E-29 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily MC28_3040 600bae69d5d3b2823630e0d7e0b3c2c0 164 SUPERFAMILY SSF74942 93 164 1.03E-21 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily MC28_4553 10863d9336e6efdb38a8c61bbd2cc967 413 Gene3D G3DSA:3.40.640.10 33 283 2.8E-188 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_4553 10863d9336e6efdb38a8c61bbd2cc967 413 Pfam PF00464 Serine hydroxymethyltransferase 4 380 6.5E-180 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 MC28_4553 10863d9336e6efdb38a8c61bbd2cc967 413 Gene3D G3DSA:3.90.1150.10 6 390 2.8E-188 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_4553 10863d9336e6efdb38a8c61bbd2cc967 413 SUPERFAMILY SSF53383 2 411 3.44E-183 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_4553 10863d9336e6efdb38a8c61bbd2cc967 413 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 MC28_4553 10863d9336e6efdb38a8c61bbd2cc967 413 PIRSF PIRSF000412 1 413 2.9E-171 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 MC28_4553 10863d9336e6efdb38a8c61bbd2cc967 413 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 53.689 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 MC28_3741 0b42d91c6078e5d3ffbee0cfd73bb0b6 228 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 210 7.1E-36 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 MC28_3741 0b42d91c6078e5d3ffbee0cfd73bb0b6 228 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 211 21.517 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 MC28_3741 0b42d91c6078e5d3ffbee0cfd73bb0b6 228 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 108 207 6.2E-31 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 MC28_3741 0b42d91c6078e5d3ffbee0cfd73bb0b6 228 Gene3D G3DSA:3.30.160.540 7 87 1.1E-28 T 14-10-2018 MC28_3741 0b42d91c6078e5d3ffbee0cfd73bb0b6 228 SUPERFAMILY SSF63848 106 207 2.75E-30 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 MC28_3741 0b42d91c6078e5d3ffbee0cfd73bb0b6 228 Gene3D G3DSA:2.160.20.70 101 226 2.6E-37 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 MC28_F011 ae0b00be25baefdef43d4d7bd07c8c01 490 Gene3D G3DSA:3.40.50.300 64 221 2.5E-13 T 14-10-2018 MC28_F011 ae0b00be25baefdef43d4d7bd07c8c01 490 Gene3D G3DSA:3.40.50.300 269 490 6.9E-37 T 14-10-2018 MC28_F011 ae0b00be25baefdef43d4d7bd07c8c01 490 SUPERFAMILY SSF52540 56 470 1.67E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4813 deaf2d633719b3fcc0db5cb46b47c518 199 SUPERFAMILY SSF53335 12 197 3.65E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4813 deaf2d633719b3fcc0db5cb46b47c518 199 Pfam PF05175 Methyltransferase small domain 28 195 2.0E-53 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 MC28_4813 deaf2d633719b3fcc0db5cb46b47c518 199 Gene3D G3DSA:3.40.50.150 6 199 7.9E-50 T 14-10-2018 MC28_1035 ab5425c8519107f7b5c08c9564721045 553 Gene3D G3DSA:3.50.30.80 370 519 8.9E-53 T 14-10-2018 MC28_1035 ab5425c8519107f7b5c08c9564721045 553 SUPERFAMILY SSF143975 2 369 2.22E-138 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 MC28_1035 ab5425c8519107f7b5c08c9564721045 553 Pfam PF00920 Dehydratase family 27 545 6.8E-227 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 MC28_1035 ab5425c8519107f7b5c08c9564721045 553 SUPERFAMILY SSF52016 370 548 4.63E-60 T 14-10-2018 MC28_1035 ab5425c8519107f7b5c08c9564721045 553 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 115 125 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 MC28_1035 ab5425c8519107f7b5c08c9564721045 553 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 10 548 7.8E-253 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 MC28_1035 ab5425c8519107f7b5c08c9564721045 553 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 548 46.387 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 MC28_1035 ab5425c8519107f7b5c08c9564721045 553 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 456 467 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 MC28_4739 0a13db8ae41e67634e7e1c0584190e4d 109 SUPERFAMILY SSF82607 13 106 9.16E-35 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily MC28_4739 0a13db8ae41e67634e7e1c0584190e4d 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 108 8.7E-34 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family MC28_4739 0a13db8ae41e67634e7e1c0584190e4d 109 PIRSF PIRSF004555 5 109 3.8E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family MC28_4739 0a13db8ae41e67634e7e1c0584190e4d 109 Pfam PF02575 YbaB/EbfC DNA-binding family 13 103 2.5E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family MC28_4739 0a13db8ae41e67634e7e1c0584190e4d 109 Gene3D G3DSA:3.30.1310.10 3 109 5.9E-41 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily MC28_4739 0a13db8ae41e67634e7e1c0584190e4d 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 7 101 23.687 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family MC28_0086 8d2d9731745ca68a6f7f0f73558ed118 93 Pfam PF06803 Protein of unknown function (DUF1232) 36 71 5.3E-11 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 MC28_0086 8d2d9731745ca68a6f7f0f73558ed118 93 PIRSF PIRSF029962 1 93 3.9E-47 T 14-10-2018 IPR016941 Uncharacterised conserved protein UCP029962 MC28_3426 a7edd691a8d173050a7cf521e48892db 267 PIRSF PIRSF000126 2 260 3.2E-60 T 14-10-2018 MC28_3426 a7edd691a8d173050a7cf521e48892db 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 2.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3426 a7edd691a8d173050a7cf521e48892db 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3426 a7edd691a8d173050a7cf521e48892db 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 2.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3426 a7edd691a8d173050a7cf521e48892db 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.9E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3426 a7edd691a8d173050a7cf521e48892db 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.9E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3426 a7edd691a8d173050a7cf521e48892db 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.9E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3426 a7edd691a8d173050a7cf521e48892db 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.9E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3426 a7edd691a8d173050a7cf521e48892db 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.9E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3426 a7edd691a8d173050a7cf521e48892db 267 Pfam PF00106 short chain dehydrogenase 11 198 1.5E-61 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3426 a7edd691a8d173050a7cf521e48892db 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_3426 a7edd691a8d173050a7cf521e48892db 267 SUPERFAMILY SSF51735 3 257 5.07E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3426 a7edd691a8d173050a7cf521e48892db 267 Gene3D G3DSA:3.40.50.720 2 266 5.7E-75 T 14-10-2018 MC28_2146 92a4ca41dd141977a090f3b8f2c859d2 190 SUPERFAMILY SSF52499 16 184 4.45E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_2146 92a4ca41dd141977a090f3b8f2c859d2 190 Pfam PF00857 Isochorismatase family 18 181 7.1E-41 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_2146 92a4ca41dd141977a090f3b8f2c859d2 190 Gene3D G3DSA:3.40.50.850 12 190 3.0E-51 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_1453 a4ce940160c62c6bf4c4135ede245689 475 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 9 474 2.5E-170 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 MC28_1453 a4ce940160c62c6bf4c4135ede245689 475 PIRSF PIRSF006060 4 447 1.4E-59 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_1453 a4ce940160c62c6bf4c4135ede245689 475 Pfam PF13520 Amino acid permease 12 414 6.1E-69 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_1453 a4ce940160c62c6bf4c4135ede245689 475 Gene3D G3DSA:1.20.1740.10 7 469 2.3E-65 T 14-10-2018 MC28_2839 8a6634c9bd671d389e29a825a6540128 294 SUPERFAMILY SSF52540 42 289 9.87E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2839 8a6634c9bd671d389e29a825a6540128 294 ProSitePatterns PS00211 ABC transporters family signature. 190 204 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2839 8a6634c9bd671d389e29a825a6540128 294 Gene3D G3DSA:3.40.50.300 49 289 3.3E-94 T 14-10-2018 MC28_2839 8a6634c9bd671d389e29a825a6540128 294 Gene3D G3DSA:1.20.1560.10 26 48 3.3E-94 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_2839 8a6634c9bd671d389e29a825a6540128 294 SMART SM00382 78 264 1.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2839 8a6634c9bd671d389e29a825a6540128 294 Pfam PF00005 ABC transporter 69 218 8.4E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3845 af72117f3af6ee63986a8aa8cfd9d360 241 Pfam PF02517 CAAX protease self-immunity 149 236 1.2E-20 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_4189 1d6035a9bf843049e4c0c58512883d81 201 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 78 195 1.1E-40 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal MC28_4189 1d6035a9bf843049e4c0c58512883d81 201 PIRSF PIRSF004793 2 201 2.3E-63 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 MC28_4189 1d6035a9bf843049e4c0c58512883d81 201 Pfam PF10372 Bacterial membrane-spanning protein N-terminus 1 69 1.7E-26 T 14-10-2018 IPR019457 Uncharacterised domain YojJ, N-terminal MC28_4189 1d6035a9bf843049e4c0c58512883d81 201 Gene3D G3DSA:3.40.1700.10 70 201 6.6E-53 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily MC28_4189 1d6035a9bf843049e4c0c58512883d81 201 Gene3D G3DSA:1.10.287.770 1 69 8.1E-40 T 14-10-2018 MC28_4189 1d6035a9bf843049e4c0c58512883d81 201 Hamap MF_00838 Diadenylate cyclase [dacB]. 14 201 35.934 T 14-10-2018 IPR034693 Diadenylate cyclase CdaS GO:0004016|GO:0006171 MC28_4189 1d6035a9bf843049e4c0c58512883d81 201 SUPERFAMILY SSF143597 36 198 6.28E-53 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily MC28_4603 f673df0e9c261a18c180b2b08561af5a 290 SUPERFAMILY SSF52768 12 289 5.22E-87 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily MC28_4603 f673df0e9c261a18c180b2b08561af5a 290 Gene3D G3DSA:3.40.800.10 16 289 5.0E-96 T 14-10-2018 MC28_4603 f673df0e9c261a18c180b2b08561af5a 290 PIRSF PIRSF036979 1 290 9.7E-104 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_4603 f673df0e9c261a18c180b2b08561af5a 290 TIGRFAM TIGR01230 agmatinase: agmatinase 10 286 1.9E-115 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 MC28_4603 f673df0e9c261a18c180b2b08561af5a 290 Pfam PF00491 Arginase family 23 285 1.3E-79 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_4603 f673df0e9c261a18c180b2b08561af5a 290 ProSitePatterns PS01053 Arginase family signature. 214 235 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 MC28_2856 befae2489900a4b6e2ad6ce31cb9ce29 390 Gene3D G3DSA:3.40.50.2000 25 184 1.6E-51 T 14-10-2018 MC28_2856 befae2489900a4b6e2ad6ce31cb9ce29 390 SUPERFAMILY SSF53756 14 317 1.03E-53 T 14-10-2018 MC28_2856 befae2489900a4b6e2ad6ce31cb9ce29 390 Pfam PF13439 Glycosyltransferase Family 4 25 188 5.9E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 MC28_2856 befae2489900a4b6e2ad6ce31cb9ce29 390 Pfam PF00534 Glycosyl transferases group 1 202 317 1.4E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_2856 befae2489900a4b6e2ad6ce31cb9ce29 390 Gene3D G3DSA:3.40.50.2000 185 317 1.6E-51 T 14-10-2018 MC28_4613 d52b9d93559674750f3bb8cef675d609 307 SUPERFAMILY SSF53807 34 300 1.49E-55 T 14-10-2018 MC28_4613 d52b9d93559674750f3bb8cef675d609 307 Gene3D G3DSA:3.40.50.1980 20 155 3.0E-31 T 14-10-2018 MC28_4613 d52b9d93559674750f3bb8cef675d609 307 Pfam PF01497 Periplasmic binding protein 94 281 5.6E-33 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_4613 d52b9d93559674750f3bb8cef675d609 307 Gene3D G3DSA:3.40.50.1980 157 307 2.0E-33 T 14-10-2018 MC28_4785 5a6b6e8f6f598fd99058069195cf1d82 290 SUPERFAMILY SSF56752 1 272 1.44E-74 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 MC28_4785 5a6b6e8f6f598fd99058069195cf1d82 290 Pfam PF01063 Amino-transferase class IV 29 249 7.6E-54 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 MC28_4785 5a6b6e8f6f598fd99058069195cf1d82 290 Gene3D G3DSA:3.30.470.10 1 124 1.3E-36 T 14-10-2018 MC28_4785 5a6b6e8f6f598fd99058069195cf1d82 290 Gene3D G3DSA:3.20.10.10 125 276 4.0E-45 T 14-10-2018 MC28_4785 5a6b6e8f6f598fd99058069195cf1d82 290 ProSitePatterns PS00770 Aminotransferases class-IV signature. 178 207 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 Gene3D G3DSA:1.10.1740.10 299 380 8.7E-30 T 14-10-2018 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 378 4.7E-170 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 SUPERFAMILY SSF69055 288 379 1.1E-31 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 PIRSF PIRSF006205 1 380 4.7E-161 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 Gene3D G3DSA:3.40.50.720 1 146 7.7E-48 T 14-10-2018 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 379 47.142 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 128 1.7E-40 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 142 225 1.7E-42 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 Pfam PF13288 DXP reductoisomerase C-terminal domain 257 374 6.0E-44 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 SUPERFAMILY SSF55347 123 260 6.87E-62 T 14-10-2018 MC28_3044 6d4d7c93f531bb373c713b1a1c396c9a 380 SUPERFAMILY SSF51735 2 146 2.13E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_F150 cd567bbf75283eba6bc4dd7ba24ea695 206 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 66 173 3.9E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_F150 cd567bbf75283eba6bc4dd7ba24ea695 206 Gene3D G3DSA:1.10.150.240 16 78 3.1E-42 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_F150 cd567bbf75283eba6bc4dd7ba24ea695 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 178 2.7E-45 T 14-10-2018 MC28_F150 cd567bbf75283eba6bc4dd7ba24ea695 206 SUPERFAMILY SSF56784 3 206 4.78E-49 T 14-10-2018 IPR036412 HAD-like superfamily MC28_F150 cd567bbf75283eba6bc4dd7ba24ea695 206 Gene3D G3DSA:3.40.50.1000 6 182 3.1E-42 T 14-10-2018 IPR023214 HAD superfamily MC28_4018 fae14e1d38548bc47033170bea1f1fe6 55 Gene3D G3DSA:3.40.630.30 1 55 6.3E-9 T 14-10-2018 MC28_2057 5139c0df93c7f87f8d623c2e418f3581 286 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 281 3.1E-94 T 14-10-2018 IPR003797 DegV MC28_2057 5139c0df93c7f87f8d623c2e418f3581 286 Gene3D G3DSA:3.40.50.10170 1 153 7.3E-44 T 14-10-2018 MC28_2057 5139c0df93c7f87f8d623c2e418f3581 286 SUPERFAMILY SSF82549 1 284 1.67E-88 T 14-10-2018 MC28_2057 5139c0df93c7f87f8d623c2e418f3581 286 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 283 1.0E-81 T 14-10-2018 IPR003797 DegV MC28_2057 5139c0df93c7f87f8d623c2e418f3581 286 Gene3D G3DSA:3.30.1180.10 157 285 2.6E-47 T 14-10-2018 MC28_4475 8592b5c24c82897b51231050587dd48c 296 SUPERFAMILY SSF50685 234 286 6.98E-11 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_4475 8592b5c24c82897b51231050587dd48c 296 Pfam PF06725 3D domain 236 296 6.1E-21 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 MC28_4475 8592b5c24c82897b51231050587dd48c 296 Gene3D G3DSA:2.30.30.40 87 144 3.8E-14 T 14-10-2018 MC28_4475 8592b5c24c82897b51231050587dd48c 296 Gene3D G3DSA:2.30.30.40 23 86 1.7E-16 T 14-10-2018 MC28_4475 8592b5c24c82897b51231050587dd48c 296 Gene3D G3DSA:2.40.40.10 145 290 3.9E-9 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_4475 8592b5c24c82897b51231050587dd48c 296 Pfam PF08239 Bacterial SH3 domain 36 84 5.9E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4475 8592b5c24c82897b51231050587dd48c 296 Pfam PF08239 Bacterial SH3 domain 95 142 1.5E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4475 8592b5c24c82897b51231050587dd48c 296 SMART SM00287 89 149 7.1E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4475 8592b5c24c82897b51231050587dd48c 296 SMART SM00287 27 88 6.0E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4586 8bc4965305d068d19baeb75e84264fc8 285 SUPERFAMILY SSF47413 5 64 6.19E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_4586 8bc4965305d068d19baeb75e84264fc8 285 SMART SM00530 9 63 1.6E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_4586 8bc4965305d068d19baeb75e84264fc8 285 Pfam PF01381 Helix-turn-helix 10 60 3.0E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_4586 8bc4965305d068d19baeb75e84264fc8 285 Gene3D G3DSA:1.25.40.10 1 285 6.0E-105 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_4586 8bc4965305d068d19baeb75e84264fc8 285 SUPERFAMILY SSF48452 155 251 1.67E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 Gene3D G3DSA:3.30.200.20 322 416 7.8E-31 T 14-10-2018 MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 Gene3D G3DSA:3.90.550.10 72 310 3.9E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 SUPERFAMILY SSF56112 344 613 1.6E-49 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 Pfam PF01633 Choline/ethanolamine kinase 364 554 9.6E-34 T 14-10-2018 MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 PIRSF PIRSF037383 3 617 1.6E-200 T 14-10-2018 IPR017190 Bifunctional CTP:phosphocholine cytidylyltransferase/choline kinase MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 Gene3D G3DSA:3.90.1200.10 418 616 4.8E-66 T 14-10-2018 MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 SUPERFAMILY SSF53448 88 308 5.39E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 46 4.9E-12 T 14-10-2018 MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 Gene3D G3DSA:1.10.10.10 2 64 2.6E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 SUPERFAMILY SSF46785 5 73 1.94E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4497 a56d8ea3d91faa5e0d9cb46ff6e16e03 626 Pfam PF12804 MobA-like NTP transferase domain 92 212 1.9E-9 T 14-10-2018 IPR025877 MobA-like NTP transferase MC28_5089 cefe2c896d3d258f68b51c2d6acf35bd 471 Pfam PF13520 Amino acid permease 7 442 1.1E-76 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5089 cefe2c896d3d258f68b51c2d6acf35bd 471 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 4 471 6.6E-189 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 MC28_5089 cefe2c896d3d258f68b51c2d6acf35bd 471 PIRSF PIRSF006060 1 470 1.0E-55 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5089 cefe2c896d3d258f68b51c2d6acf35bd 471 Gene3D G3DSA:1.20.1740.10 2 465 1.6E-67 T 14-10-2018 MC28_5089 cefe2c896d3d258f68b51c2d6acf35bd 471 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 5 471 4.4E-222 T 14-10-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 MC28_3360 8902e0f2fabbd5e1fa52cc40a0c4b428 152 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 26 143 1.6E-41 T 14-10-2018 IPR005562 SpoVA MC28_3360 8902e0f2fabbd5e1fa52cc40a0c4b428 152 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 9 147 3.4E-67 T 14-10-2018 IPR014203 Sporulation stage V, protein AC MC28_1141 4fb19ccb44dd432029009dd6f5de4966 262 Gene3D G3DSA:3.40.190.290 91 257 1.8E-5 T 14-10-2018 MC28_1141 4fb19ccb44dd432029009dd6f5de4966 262 SUPERFAMILY SSF53850 87 251 2.71E-9 T 14-10-2018 MC28_1141 4fb19ccb44dd432029009dd6f5de4966 262 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1141 4fb19ccb44dd432029009dd6f5de4966 262 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1141 4fb19ccb44dd432029009dd6f5de4966 262 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1141 4fb19ccb44dd432029009dd6f5de4966 262 SUPERFAMILY SSF46785 1 103 2.06E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1141 4fb19ccb44dd432029009dd6f5de4966 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1141 4fb19ccb44dd432029009dd6f5de4966 262 Gene3D G3DSA:1.10.10.10 1 90 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4546 2358288b934fe265ee3bed5b64d8cfe1 168 Pfam PF00430 ATP synthase B/B' CF(0) 14 145 8.5E-37 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MC28_4546 2358288b934fe265ee3bed5b64d8cfe1 168 Hamap MF_01398 ATP synthase subunit b [atpF]. 9 146 13.206 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MC28_4546 2358288b934fe265ee3bed5b64d8cfe1 168 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 21 164 8.7E-39 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 MC28_4546 2358288b934fe265ee3bed5b64d8cfe1 168 SUPERFAMILY SSF81573 71 129 2.22E-7 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily MC28_0165 21971631a56c744f3dbc910174f6880e 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 276 4.9E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0165 21971631a56c744f3dbc910174f6880e 283 Gene3D G3DSA:1.10.3720.10 66 275 1.7E-20 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0165 21971631a56c744f3dbc910174f6880e 283 SUPERFAMILY SSF161098 75 261 3.92E-25 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0165 21971631a56c744f3dbc910174f6880e 283 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 55 5.3E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain MC28_5267 dc13d14abbeed9d7c946676135d18b86 258 SUPERFAMILY SSF53955 55 239 1.6E-69 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_5267 dc13d14abbeed9d7c946676135d18b86 258 Pfam PF00912 Transglycosylase 60 217 3.0E-60 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_5267 dc13d14abbeed9d7c946676135d18b86 258 Gene3D G3DSA:1.10.3810.10 61 243 2.2E-78 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_2438 f5ccbaf9a3745201a910cbcf05824b03 46 SUPERFAMILY SSF53756 1 45 1.03E-8 T 14-10-2018 MC28_2438 f5ccbaf9a3745201a910cbcf05824b03 46 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 1 45 1.9E-4 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 MC28_2438 f5ccbaf9a3745201a910cbcf05824b03 46 Gene3D G3DSA:3.40.50.2000 1 45 1.4E-7 T 14-10-2018 MC28_2121 32046b3d374fefe5d4c85dba812c4423 165 Pfam PF13420 Acetyltransferase (GNAT) domain 2 157 2.8E-21 T 14-10-2018 MC28_2121 32046b3d374fefe5d4c85dba812c4423 165 Gene3D G3DSA:3.40.630.30 1 164 3.7E-43 T 14-10-2018 MC28_2121 32046b3d374fefe5d4c85dba812c4423 165 SUPERFAMILY SSF55729 1 165 1.58E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 SUPERFAMILY SSF54980 408 503 1.25E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 PRINTS PR00315 GTP-binding elongation factor signature 135 144 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Gene3D G3DSA:3.40.50.300 9 194 9.0E-75 T 14-10-2018 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 183 1.4E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Pfam PF00679 Elongation factor G C-terminus 408 495 1.9E-25 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Gene3D G3DSA:2.40.30.10 195 294 1.7E-36 T 14-10-2018 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 3.7E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Gene3D G3DSA:3.30.70.870 295 376 6.3E-36 T 14-10-2018 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Gene3D G3DSA:3.30.70.3380 377 488 3.9E-44 T 14-10-2018 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 315.323 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 SUPERFAMILY SSF54980 301 379 1.58E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.5E-12 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Gene3D G3DSA:3.30.70.2570 489 563 1.0E-35 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 SUPERFAMILY SSF52540 6 239 1.2E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 SMART SM00838 410 495 1.4E-4 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site MC28_3610 8c7eb1b7895ad7abcf7a9aedea1da1a5 607 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 3.1E-52 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal MC28_3144 96c14123baa91d56ca31d73d172b828c 168 SUPERFAMILY SSF46689 6 62 2.34E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3144 96c14123baa91d56ca31d73d172b828c 168 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 3 154 1.7E-56 T 14-10-2018 IPR014243 Transcription factor, RsfA MC28_3144 96c14123baa91d56ca31d73d172b828c 168 Gene3D G3DSA:1.10.10.60 8 85 2.6E-6 T 14-10-2018 MC28_3144 96c14123baa91d56ca31d73d172b828c 168 Pfam PF13921 Myb-like DNA-binding domain 9 62 5.3E-7 T 14-10-2018 MC28_3144 96c14123baa91d56ca31d73d172b828c 168 SMART SM00717 5 59 9.0E-4 T 14-10-2018 IPR001005 SANT/Myb domain MC28_1038 4329fce57f61202c40c4859838eaabd0 238 Pfam PF04474 Protein of unknown function (DUF554) 4 226 1.1E-72 T 14-10-2018 IPR007563 Protein of unknown function DUF554 MC28_1307 d039409916f1a817dc477592e06a8f77 83 SUPERFAMILY SSF54236 6 82 1.64E-5 T 14-10-2018 IPR029071 Ubiquitin-like domain superfamily MC28_1307 d039409916f1a817dc477592e06a8f77 83 Gene3D G3DSA:3.10.20.90 3 83 1.2E-23 T 14-10-2018 MC28_1307 d039409916f1a817dc477592e06a8f77 83 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 6 81 2.4E-12 T 14-10-2018 IPR024962 YukD-like MC28_1307 d039409916f1a817dc477592e06a8f77 83 PIRSF PIRSF037793 3 83 1.2E-36 T 14-10-2018 IPR014921 EsaB MC28_1686 4b25c0d3e14f75eb740fcb612aee92d2 245 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 233 1.5E-108 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 MC28_1686 4b25c0d3e14f75eb740fcb612aee92d2 245 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 44.973 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 MC28_1686 4b25c0d3e14f75eb740fcb612aee92d2 245 Gene3D G3DSA:3.40.50.1240 1 238 4.1E-85 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_1686 4b25c0d3e14f75eb740fcb612aee92d2 245 PIRSF PIRSF000709 172 232 0.3 T 14-10-2018 MC28_1686 4b25c0d3e14f75eb740fcb612aee92d2 245 PIRSF PIRSF000709 3 120 3.2E-8 T 14-10-2018 MC28_1686 4b25c0d3e14f75eb740fcb612aee92d2 245 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 125 2.6E-29 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_1686 4b25c0d3e14f75eb740fcb612aee92d2 245 SMART SM00855 3 189 6.9E-27 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_1686 4b25c0d3e14f75eb740fcb612aee92d2 245 SUPERFAMILY SSF53254 1 230 6.39E-74 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_1686 4b25c0d3e14f75eb740fcb612aee92d2 245 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 MC28_2858 6425d23d8146e6ee23837dc733fa7e89 300 Pfam PF00535 Glycosyl transferase family 2 8 136 9.6E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_2858 6425d23d8146e6ee23837dc733fa7e89 300 Gene3D G3DSA:3.90.550.10 1 259 2.0E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_2858 6425d23d8146e6ee23837dc733fa7e89 300 SUPERFAMILY SSF53448 7 236 1.59E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4829 86cccad083713518b98e2e0e0d699096 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4829 86cccad083713518b98e2e0e0d699096 144 SUPERFAMILY SSF54686 1 136 4.19E-58 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_4829 86cccad083713518b98e2e0e0d699096 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4829 86cccad083713518b98e2e0e0d699096 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 8.6E-52 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 MC28_4829 86cccad083713518b98e2e0e0d699096 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.071 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4829 86cccad083713518b98e2e0e0d699096 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.0E-62 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4829 86cccad083713518b98e2e0e0d699096 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.6E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4829 86cccad083713518b98e2e0e0d699096 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.6E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4829 86cccad083713518b98e2e0e0d699096 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.6E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4829 86cccad083713518b98e2e0e0d699096 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.6E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4829 86cccad083713518b98e2e0e0d699096 144 Gene3D G3DSA:3.90.1170.10 1 144 3.0E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_3344 1ae6ebbddd5e504cc9082ff4b8e36cb6 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 1 249 1.1E-46 T 14-10-2018 IPR000150 Cof family GO:0016787 MC28_3344 1ae6ebbddd5e504cc9082ff4b8e36cb6 265 SUPERFAMILY SSF56784 1 251 4.01E-52 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3344 1ae6ebbddd5e504cc9082ff4b8e36cb6 265 Gene3D G3DSA:3.30.1240.10 79 185 4.1E-54 T 14-10-2018 MC28_3344 1ae6ebbddd5e504cc9082ff4b8e36cb6 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 1 229 3.5E-25 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 MC28_3344 1ae6ebbddd5e504cc9082ff4b8e36cb6 265 Gene3D G3DSA:3.40.50.1000 2 254 4.1E-54 T 14-10-2018 IPR023214 HAD superfamily MC28_3344 1ae6ebbddd5e504cc9082ff4b8e36cb6 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 3 254 1.5E-49 T 14-10-2018 MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 Gene3D G3DSA:3.40.50.970 8 191 1.7E-72 T 14-10-2018 MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 SUPERFAMILY SSF52467 201 365 6.36E-61 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 Gene3D G3DSA:3.40.50.970 365 571 6.6E-71 T 14-10-2018 MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 Gene3D G3DSA:3.40.50.1220 200 363 4.8E-60 T 14-10-2018 MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 397 543 2.4E-51 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 SUPERFAMILY SSF52518 373 566 5.71E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 206 340 5.3E-43 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 17 182 1.5E-57 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 17 566 2.7E-250 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 MC28_1032 69bdc7e07a4621b837fe063bc2d69d2a 571 SUPERFAMILY SSF52518 15 191 3.45E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_5348 bfde4ebe429b8b71021a07365ba8273a 627 SUPERFAMILY SSF53300 435 621 3.27E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily MC28_5348 bfde4ebe429b8b71021a07365ba8273a 627 Pfam PF00092 von Willebrand factor type A domain 436 601 9.5E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A MC28_5348 bfde4ebe429b8b71021a07365ba8273a 627 SMART SM00327 431 622 1.0E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A MC28_5348 bfde4ebe429b8b71021a07365ba8273a 627 Gene3D G3DSA:3.40.50.410 424 622 3.1E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily MC28_0055 a759b26a26ac8008a30ece22ddf80ad7 159 Pfam PF13686 DsrE/DsrF/DrsH-like family 4 158 5.4E-67 T 14-10-2018 IPR032836 DsrE2-like family MC28_0055 a759b26a26ac8008a30ece22ddf80ad7 159 SUPERFAMILY SSF75169 5 157 3.24E-23 T 14-10-2018 IPR027396 DsrEFH-like MC28_0055 a759b26a26ac8008a30ece22ddf80ad7 159 Gene3D G3DSA:3.40.1260.10 1 159 1.2E-64 T 14-10-2018 IPR027396 DsrEFH-like MC28_4812 489e26424ca923853bbcdfdc192f6f87 119 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 119 25.897 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4812 489e26424ca923853bbcdfdc192f6f87 119 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 119 5.7E-50 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4812 489e26424ca923853bbcdfdc192f6f87 119 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 48 1.1E-20 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4812 489e26424ca923853bbcdfdc192f6f87 119 Gene3D G3DSA:3.30.1390.10 49 119 2.6E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like MC28_4812 489e26424ca923853bbcdfdc192f6f87 119 SUPERFAMILY SSF54736 49 119 7.15E-26 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like MC28_4812 489e26424ca923853bbcdfdc192f6f87 119 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 53 119 8.9E-32 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4812 489e26424ca923853bbcdfdc192f6f87 119 SUPERFAMILY SSF48300 1 55 1.07E-16 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4812 489e26424ca923853bbcdfdc192f6f87 119 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 54 119 6.0E-17 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4812 489e26424ca923853bbcdfdc192f6f87 119 Gene3D G3DSA:1.20.5.710 1 48 1.4E-22 T 14-10-2018 MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 Pfam PF07549 SecD/SecF GG Motif 471 498 2.0E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 Pfam PF07549 SecD/SecF GG Motif 30 51 0.026 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 Gene3D G3DSA:1.20.1640.10 230 425 1.9E-10 T 14-10-2018 MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 558 721 5.5E-48 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 192 402 2.0E-49 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 423 32.475 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 SUPERFAMILY SSF82866 213 414 9.94E-38 T 14-10-2018 MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 35 409 1.5E-98 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 449 735 25.591 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 Gene3D G3DSA:3.30.70.3400 35 123 1.4E-23 T 14-10-2018 MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 PRINTS PR01755 Bacterial translocase SecF protein signature 588 602 4.9E-21 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 PRINTS PR01755 Bacterial translocase SecF protein signature 476 491 4.9E-21 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 PRINTS PR01755 Bacterial translocase SecF protein signature 636 654 4.9E-21 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 PRINTS PR01755 Bacterial translocase SecF protein signature 672 687 4.9E-21 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 Pfam PF02355 Protein export membrane protein 555 733 7.5E-63 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 Pfam PF02355 Protein export membrane protein 242 406 3.0E-13 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 SUPERFAMILY SSF82866 557 737 1.18E-36 T 14-10-2018 MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 478 724 2.0E-67 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 MC28_3703 297f947fff1dc97b84fcbf6d8eedc91a 754 Gene3D G3DSA:1.20.1640.10 552 747 2.3E-10 T 14-10-2018 MC28_3341 48008f36b23ef60c873996270d2019b1 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 2 80 6.6E-31 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_3341 48008f36b23ef60c873996270d2019b1 87 PRINTS PR00107 Phosphocarrier protein signature 12 28 6.6E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_3341 48008f36b23ef60c873996270d2019b1 87 PRINTS PR00107 Phosphocarrier protein signature 37 52 6.6E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_3341 48008f36b23ef60c873996270d2019b1 87 PRINTS PR00107 Phosphocarrier protein signature 52 69 6.6E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_3341 48008f36b23ef60c873996270d2019b1 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 12 19 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site MC28_3341 48008f36b23ef60c873996270d2019b1 87 Gene3D G3DSA:3.30.1340.10 1 87 5.9E-35 T 14-10-2018 IPR035895 HPr-like superfamily MC28_3341 48008f36b23ef60c873996270d2019b1 87 SUPERFAMILY SSF55594 3 82 5.89E-27 T 14-10-2018 IPR035895 HPr-like superfamily MC28_3341 48008f36b23ef60c873996270d2019b1 87 Pfam PF00381 PTS HPr component phosphorylation site 2 81 2.2E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_3341 48008f36b23ef60c873996270d2019b1 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 38 53 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site MC28_4581 08793e449404fe7b9b45340b33eaeb59 673 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 342 353 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MC28_4581 08793e449404fe7b9b45340b33eaeb59 673 Pfam PF02754 Cysteine-rich domain 552 639 1.1E-17 T 14-10-2018 IPR004017 Cysteine-rich domain MC28_4581 08793e449404fe7b9b45340b33eaeb59 673 Pfam PF02754 Cysteine-rich domain 430 513 1.1E-6 T 14-10-2018 IPR004017 Cysteine-rich domain MC28_4581 08793e449404fe7b9b45340b33eaeb59 673 SUPERFAMILY SSF46548 222 370 7.85E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 MC28_4581 08793e449404fe7b9b45340b33eaeb59 673 SUPERFAMILY SSF103501 28 208 1.15E-15 T 14-10-2018 IPR036197 NarG-like superfamily MC28_4581 08793e449404fe7b9b45340b33eaeb59 673 Pfam PF13183 4Fe-4S dicluster domain 244 354 2.5E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MC28_2087 1289065c5d4d673fa8d3d955e91e62f4 399 Gene3D G3DSA:3.90.1150.10 25 382 1.2E-115 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2087 1289065c5d4d673fa8d3d955e91e62f4 399 Gene3D G3DSA:3.40.640.10 44 284 1.2E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2087 1289065c5d4d673fa8d3d955e91e62f4 399 Pfam PF00155 Aminotransferase class I and II 33 382 2.1E-61 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_2087 1289065c5d4d673fa8d3d955e91e62f4 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 MC28_2087 1289065c5d4d673fa8d3d955e91e62f4 399 SUPERFAMILY SSF53383 5 384 4.26E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_2706 1b487ce2d2c195f93d789d6257922357 620 Gene3D G3DSA:1.50.10.20 35 301 1.4E-189 T 14-10-2018 MC28_2706 1b487ce2d2c195f93d789d6257922357 620 Gene3D G3DSA:1.50.10.20 19 614 1.4E-189 T 14-10-2018 MC28_2706 1b487ce2d2c195f93d789d6257922357 620 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 14 293 1.4E-68 T 14-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 MC28_2706 1b487ce2d2c195f93d789d6257922357 620 SUPERFAMILY SSF48239 278 617 1.54E-83 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid MC28_2706 1b487ce2d2c195f93d789d6257922357 620 SUPERFAMILY SSF48239 40 296 1.15E-41 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid MC28_2706 1b487ce2d2c195f93d789d6257922357 620 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 16 616 2.6E-118 T 14-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 MC28_2706 1b487ce2d2c195f93d789d6257922357 620 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 303 615 3.3E-95 T 14-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 MC28_1458 473f70fba9fe0d27a89d2993633f2688 180 Hamap MF_01170 Chromosome-anchoring protein RacA [racA]. 3 180 18.958 T 14-10-2018 IPR023522 Chromosome-anchoring protein RacA MC28_1458 473f70fba9fe0d27a89d2993633f2688 180 Gene3D G3DSA:1.10.1660.10 4 64 4.5E-10 T 14-10-2018 MC28_1458 473f70fba9fe0d27a89d2993633f2688 180 SUPERFAMILY SSF58064 64 141 2.84E-5 T 14-10-2018 MC28_0505 ffb7b9968e78ff1ccd638eb9eb344f83 407 Gene3D G3DSA:3.40.710.10 5 297 1.5E-77 T 14-10-2018 MC28_0505 ffb7b9968e78ff1ccd638eb9eb344f83 407 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 144 1.2E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_0505 ffb7b9968e78ff1ccd638eb9eb344f83 407 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 54 65 1.2E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_0505 ffb7b9968e78ff1ccd638eb9eb344f83 407 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 104 121 1.2E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_0505 ffb7b9968e78ff1ccd638eb9eb344f83 407 SUPERFAMILY SSF56601 25 265 5.45E-57 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_0505 ffb7b9968e78ff1ccd638eb9eb344f83 407 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 25 245 4.4E-49 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MC28_0505 ffb7b9968e78ff1ccd638eb9eb344f83 407 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 289 355 9.1E-5 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_4443 14f8fb4740d09d13a5955a03c50bf731 435 PIRSF PIRSF006351 1 432 2.4E-148 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 MC28_4443 14f8fb4740d09d13a5955a03c50bf731 435 Pfam PF02378 Phosphotransferase system, EIIC 29 349 1.1E-63 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_4443 14f8fb4740d09d13a5955a03c50bf731 435 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 420 6.5E-142 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 MC28_4443 14f8fb4740d09d13a5955a03c50bf731 435 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 420 6.5E-142 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 MC28_0675 cc95c18d5a02d590d3fb3b70d8fbcf55 351 Pfam PF07730 Histidine kinase 149 216 9.7E-20 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MC28_0675 cc95c18d5a02d590d3fb3b70d8fbcf55 351 Gene3D G3DSA:3.30.565.10 214 346 3.8E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0675 cc95c18d5a02d590d3fb3b70d8fbcf55 351 SMART SM00387 252 345 2.6E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0675 cc95c18d5a02d590d3fb3b70d8fbcf55 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 252 342 4.6E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0675 cc95c18d5a02d590d3fb3b70d8fbcf55 351 SUPERFAMILY SSF55874 220 342 2.23E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0675 cc95c18d5a02d590d3fb3b70d8fbcf55 351 PIRSF PIRSF037431 5 351 1.3E-136 T 14-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 Pfam PF00162 Phosphoglycerate kinase 6 383 3.2E-166 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 Gene3D G3DSA:3.40.50.1260 177 381 8.3E-88 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 Gene3D G3DSA:3.40.50.1260 1 170 2.6E-76 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 43.009 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 SUPERFAMILY SSF53748 1 393 2.12E-163 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 3.8E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 3.8E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 3.8E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.8E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 3.8E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 3.8E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 3.8E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 3.8E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.8E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4370 0413d41eed68b3506825fba48fd89c81 394 PIRSF PIRSF000724 1 394 4.0E-159 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_G048 cf98eccb221e676ba1241dfc723dd4b7 325 SUPERFAMILY SSF53756 41 221 1.15E-8 T 14-10-2018 MC28_G048 cf98eccb221e676ba1241dfc723dd4b7 325 Pfam PF13524 Glycosyl transferases group 1 215 316 1.2E-10 T 14-10-2018 MC28_G048 cf98eccb221e676ba1241dfc723dd4b7 325 Pfam PF12996 DUF based on E. rectale Gene description (DUF3880) 82 154 1.1E-17 T 14-10-2018 IPR024542 Domain of unknown function DUF3880 MC28_0044 2c29dc0f31fe4282157ea8f59e1d7327 420 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 3 216 2.1E-11 T 14-10-2018 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 MC28_3212 aea44032489cfa726d26dadae7f459cf 266 SUPERFAMILY SSF52151 4 259 5.23E-56 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MC28_3212 aea44032489cfa726d26dadae7f459cf 266 Pfam PF01734 Patatin-like phospholipase 11 77 1.3E-10 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 MC28_3212 aea44032489cfa726d26dadae7f459cf 266 Pfam PF01734 Patatin-like phospholipase 127 167 7.4E-9 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 MC28_3212 aea44032489cfa726d26dadae7f459cf 266 Gene3D G3DSA:3.40.1090.10 1 108 9.8E-29 T 14-10-2018 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 2.8E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 2.8E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 2.8E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 2.8E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 2.8E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 Pfam PF01472 PUA domain 282 353 1.7E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 Gene3D G3DSA:2.30.130.10 271 371 7.3E-28 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 265 35.823 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 PIRSF PIRSF000729 4 372 4.4E-144 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 SUPERFAMILY SSF53633 9 259 6.81E-64 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 1.7E-134 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 Gene3D G3DSA:3.40.1160.10 4 268 8.2E-79 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 SMART SM00359 282 362 7.0E-15 T 14-10-2018 IPR002478 PUA domain GO:0003723 MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 SUPERFAMILY SSF88697 282 370 2.98E-19 T 14-10-2018 IPR015947 PUA-like superfamily MC28_2180 8d2282dec83d8753d74ac574d10ad867 372 Pfam PF00696 Amino acid kinase family 9 237 2.4E-42 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 MC28_1294 494ffb7cf219a9c0f7cb7fd826855fca 412 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 17 404 2.5E-117 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 MC28_1294 494ffb7cf219a9c0f7cb7fd826855fca 412 Gene3D G3DSA:3.40.50.2000 226 389 3.2E-125 T 14-10-2018 MC28_1294 494ffb7cf219a9c0f7cb7fd826855fca 412 SUPERFAMILY SSF53756 11 401 4.94E-79 T 14-10-2018 MC28_1294 494ffb7cf219a9c0f7cb7fd826855fca 412 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 239 382 3.0E-24 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 MC28_1294 494ffb7cf219a9c0f7cb7fd826855fca 412 Gene3D G3DSA:3.40.50.2000 15 400 3.2E-125 T 14-10-2018 MC28_1586 175bdc616763983963a56b8925c245ef 397 SUPERFAMILY SSF52743 119 390 1.03E-91 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_1586 175bdc616763983963a56b8925c245ef 397 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 331 341 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_1586 175bdc616763983963a56b8925c245ef 397 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 142 153 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site MC28_1586 175bdc616763983963a56b8925c245ef 397 Gene3D G3DSA:3.40.50.200 109 387 3.4E-101 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_1586 175bdc616763983963a56b8925c245ef 397 PRINTS PR00723 Subtilisin serine protease family (S8) signature 137 156 8.7E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_1586 175bdc616763983963a56b8925c245ef 397 PRINTS PR00723 Subtilisin serine protease family (S8) signature 330 346 8.7E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_1586 175bdc616763983963a56b8925c245ef 397 PRINTS PR00723 Subtilisin serine protease family (S8) signature 175 188 8.7E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_1586 175bdc616763983963a56b8925c245ef 397 Pfam PF00082 Subtilase family 139 373 6.2E-50 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_0716 86b725a766805c7b204e44662dabdf0a 201 Gene3D G3DSA:1.10.1760.20 6 195 6.7E-52 T 14-10-2018 MC28_0716 86b725a766805c7b204e44662dabdf0a 201 PIRSF PIRSF037778 12 199 1.2E-40 T 14-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 MC28_0716 86b725a766805c7b204e44662dabdf0a 201 Pfam PF12822 ECF transporter, substrate-specific component 18 186 1.1E-22 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 Pfam PF00271 Helicase conserved C-terminal domain 1714 1822 6.7E-8 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 SMART SM00487 1294 1563 6.6E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 SMART SM00490 1736 1822 7.2E-5 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 Gene3D G3DSA:3.40.50.150 584 833 1.3E-33 T 14-10-2018 MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 Gene3D G3DSA:3.40.50.300 1630 1895 5.6E-29 T 14-10-2018 MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 Pfam PF07669 Eco57I restriction-modification methylase 688 787 4.6E-6 T 14-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 SUPERFAMILY SSF53335 592 882 2.46E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 Pfam PF00176 SNF2 family N-terminal domain 1315 1642 4.0E-13 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 688 700 4.4E-7 T 14-10-2018 MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 627 641 4.4E-7 T 14-10-2018 MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 712 736 4.4E-7 T 14-10-2018 MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 SUPERFAMILY SSF52540 1248 1563 1.2E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_D138 b9cc4ced6ee07fa0687dafcd21c8659f 2354 SUPERFAMILY SSF52540 1477 1872 1.29E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2794 4c22ca6c769e151aa5ed5398103752ed 409 Gene3D G3DSA:2.30.40.10 6 394 2.1E-168 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_2794 4c22ca6c769e151aa5ed5398103752ed 409 TIGRFAM TIGR01224 hutI: imidazolonepropionase 19 395 2.9E-155 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2794 4c22ca6c769e151aa5ed5398103752ed 409 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 396 41.419 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 MC28_2794 4c22ca6c769e151aa5ed5398103752ed 409 SUPERFAMILY SSF51338 19 402 9.66E-23 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_2794 4c22ca6c769e151aa5ed5398103752ed 409 SUPERFAMILY SSF51556 58 356 1.75E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_2794 4c22ca6c769e151aa5ed5398103752ed 409 Pfam PF01979 Amidohydrolase family 55 398 2.1E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 MC28_2794 4c22ca6c769e151aa5ed5398103752ed 409 Gene3D G3DSA:3.20.20.140 59 356 2.1E-168 T 14-10-2018 MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 Gene3D G3DSA:3.40.50.300 414 595 3.3E-53 T 14-10-2018 MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 Pfam PF12344 Ultra-violet resistance protein B 551 592 1.1E-22 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 Gene3D G3DSA:4.10.860.10 604 657 5.5E-6 T 14-10-2018 MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 Pfam PF00271 Helicase conserved C-terminal domain 440 544 6.0E-19 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 Pfam PF04851 Type III restriction enzyme, res subunit 16 115 4.9E-10 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 Pfam PF02151 UvrB/uvrC motif 622 656 8.0E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 655 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 657 44.912 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 SMART SM00490 459 545 2.9E-20 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 Gene3D G3DSA:3.40.50.300 263 413 2.3E-54 T 14-10-2018 MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 SUPERFAMILY SSF52540 32 593 2.92E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 SMART SM00487 9 425 4.9E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 Gene3D G3DSA:3.40.50.300 1 243 4.1E-83 T 14-10-2018 MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 SUPERFAMILY SSF52540 4 414 6.3E-143 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4402 1449e3c9c0df55668de5a011fe1c561f 658 SUPERFAMILY SSF46600 613 656 5.49E-10 T 14-10-2018 IPR036876 UVR domain superfamily MC28_1433 d5c491c56f0ae0586bfd1890a2f94092 182 SUPERFAMILY SSF52499 2 176 6.15E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_1433 d5c491c56f0ae0586bfd1890a2f94092 182 Gene3D G3DSA:3.40.50.850 2 182 8.4E-52 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_1433 d5c491c56f0ae0586bfd1890a2f94092 182 Pfam PF00857 Isochorismatase family 4 176 2.5E-37 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_2369 92e43a4f922470ba613d83716b498c10 328 Gene3D G3DSA:3.40.50.720 1 328 7.2E-76 T 14-10-2018 MC28_2369 92e43a4f922470ba613d83716b498c10 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 228 5.3E-35 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_2369 92e43a4f922470ba613d83716b498c10 328 SUPERFAMILY SSF51735 1 326 3.86E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 SUPERFAMILY SSF53474 13 277 1.23E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 Gene3D G3DSA:3.40.50.1820 1 278 5.5E-93 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 Pfam PF00561 alpha/beta hydrolase fold 25 258 1.1E-27 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 PRINTS PR00412 Epoxide hydrolase signature 253 275 1.4E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 PRINTS PR00412 Epoxide hydrolase signature 31 49 1.4E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 PRINTS PR00412 Epoxide hydrolase signature 51 66 1.4E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 PRINTS PR00412 Epoxide hydrolase signature 219 235 1.4E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 9.4E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 9.4E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2299 ca4d492dc5a30c21981bfae310b50bd0 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 9.4E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_5133 d176a20bfe9c6a34780600ce8b7a63a9 171 Pfam PF13294 Domain of unknown function (DUF4075) 91 169 1.2E-48 T 14-10-2018 IPR025276 Protein of unknown function DUF4075 MC28_1564 794db0162c053ae22be0bd5e8b575aab 350 Gene3D G3DSA:3.90.226.10 3 350 1.0E-114 T 14-10-2018 MC28_1564 794db0162c053ae22be0bd5e8b575aab 350 SUPERFAMILY SSF52096 3 331 1.77E-57 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_1564 794db0162c053ae22be0bd5e8b575aab 350 Pfam PF16113 Enoyl-CoA hydratase/isomerase 15 345 2.3E-118 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 374 2.8E-91 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 Pfam PF02767 DNA polymerase III beta subunit, central domain 135 248 1.2E-32 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 Gene3D G3DSA:3.10.150.10 1 247 2.2E-106 T 14-10-2018 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 251 374 1.6E-23 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 SUPERFAMILY SSF55979 132 248 3.14E-27 T 14-10-2018 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 Gene3D G3DSA:3.70.10.10 144 373 2.2E-106 T 14-10-2018 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 SUPERFAMILY SSF55979 1 126 5.24E-22 T 14-10-2018 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 PIRSF PIRSF000804 1 376 3.9E-92 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 126 1.8E-25 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 SMART SM00480 17 371 1.5E-108 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 MC28_1884 01e5ea60d69be2a8446ecacd0d49fad4 376 SUPERFAMILY SSF55979 251 374 1.73E-21 T 14-10-2018 MC28_F239 e9b877d87842ef9af9a262bfc5a552d5 347 Gene3D G3DSA:1.10.3290.10 20 288 3.4E-36 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_F239 e9b877d87842ef9af9a262bfc5a552d5 347 SUPERFAMILY SSF140931 93 281 1.96E-28 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_F239 e9b877d87842ef9af9a262bfc5a552d5 347 Pfam PF02661 Fic/DOC family 109 215 2.6E-14 T 14-10-2018 IPR003812 Fido domain MC28_2627 de2cb90961300334592825309f8523cf 162 Gene3D G3DSA:1.20.120.450 2 162 3.2E-30 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2627 de2cb90961300334592825309f8523cf 162 Pfam PF05163 DinB family 7 161 1.3E-21 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB MC28_2627 de2cb90961300334592825309f8523cf 162 SUPERFAMILY SSF109854 1 160 5.86E-29 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_0596 f932ffa6aea955d385a140c6e753879b 258 Pfam PF12730 ABC-2 family transporter protein 4 182 2.1E-35 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 MC28_3372 56865dfdd969348dfb7be0cb2ce7f941 354 Pfam PF12679 ABC-2 family transporter protein 67 282 6.1E-10 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 MC28_3372 56865dfdd969348dfb7be0cb2ce7f941 354 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 157 171 1.1E-6 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD MC28_3372 56865dfdd969348dfb7be0cb2ce7f941 354 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 94 108 1.1E-6 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD MC28_3372 56865dfdd969348dfb7be0cb2ce7f941 354 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 174 186 1.1E-6 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD MC28_4318 22d8bb223e93d5e1db4f04cc358d882f 168 Pfam PF00210 Ferritin-like domain 8 144 4.5E-41 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 MC28_4318 22d8bb223e93d5e1db4f04cc358d882f 168 SUPERFAMILY SSF47240 1 160 3.08E-58 T 14-10-2018 IPR009078 Ferritin-like superfamily MC28_4318 22d8bb223e93d5e1db4f04cc358d882f 168 Gene3D G3DSA:1.20.1260.10 1 168 2.3E-51 T 14-10-2018 IPR012347 Ferritin-like MC28_1437 e1610711bf70274a35f15421c9962fe6 211 SUPERFAMILY SSF52172 2 132 4.27E-35 T 14-10-2018 IPR011006 CheY-like superfamily MC28_1437 e1610711bf70274a35f15421c9962fe6 211 Pfam PF00072 Response regulator receiver domain 6 116 1.7E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1437 e1610711bf70274a35f15421c9962fe6 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.1E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1437 e1610711bf70274a35f15421c9962fe6 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.1E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1437 e1610711bf70274a35f15421c9962fe6 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.1E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1437 e1610711bf70274a35f15421c9962fe6 211 Gene3D G3DSA:3.40.50.12740 3 209 2.0E-73 T 14-10-2018 MC28_1437 e1610711bf70274a35f15421c9962fe6 211 SMART SM00448 3 116 3.7E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1437 e1610711bf70274a35f15421c9962fe6 211 SMART SM00421 148 205 1.9E-26 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1437 e1610711bf70274a35f15421c9962fe6 211 SUPERFAMILY SSF46894 139 209 5.78E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_1437 e1610711bf70274a35f15421c9962fe6 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1437 e1610711bf70274a35f15421c9962fe6 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 2.0E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1793 600605dc3c8341fb7b213c1887578f99 231 Pfam PF00072 Response regulator receiver domain 1 108 6.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1793 600605dc3c8341fb7b213c1887578f99 231 SMART SM00862 146 221 1.2E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1793 600605dc3c8341fb7b213c1887578f99 231 Gene3D G3DSA:3.40.50.2300 1 119 1.3E-26 T 14-10-2018 MC28_1793 600605dc3c8341fb7b213c1887578f99 231 Gene3D G3DSA:1.10.10.10 120 223 4.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1793 600605dc3c8341fb7b213c1887578f99 231 SMART SM00448 1 108 4.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1793 600605dc3c8341fb7b213c1887578f99 231 SUPERFAMILY SSF52172 1 114 7.83E-32 T 14-10-2018 IPR011006 CheY-like superfamily MC28_1793 600605dc3c8341fb7b213c1887578f99 231 SUPERFAMILY SSF46894 124 222 8.22E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_1793 600605dc3c8341fb7b213c1887578f99 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 4.5E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1401 3a9ef274218ce9d1d4f4c2176f232269 232 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_1401 3a9ef274218ce9d1d4f4c2176f232269 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 6.0E-60 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_1401 3a9ef274218ce9d1d4f4c2176f232269 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 9.1E-76 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 MC28_1401 3a9ef274218ce9d1d4f4c2176f232269 232 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 192 202 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_1401 3a9ef274218ce9d1d4f4c2176f232269 232 SUPERFAMILY SSF53681 119 228 3.76E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_1401 3a9ef274218ce9d1d4f4c2176f232269 232 Gene3D G3DSA:3.40.50.1860 4 222 9.9E-86 T 14-10-2018 MC28_1401 3a9ef274218ce9d1d4f4c2176f232269 232 SUPERFAMILY SSF53681 1 116 8.83E-38 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_1401 3a9ef274218ce9d1d4f4c2176f232269 232 Gene3D G3DSA:3.40.50.1860 104 214 9.9E-86 T 14-10-2018 MC28_3822 4e0c15cfcd3d2416286469527b8084e2 107 Gene3D G3DSA:3.30.70.100 1 106 4.4E-33 T 14-10-2018 MC28_3822 4e0c15cfcd3d2416286469527b8084e2 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.8E-15 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain MC28_3822 4e0c15cfcd3d2416286469527b8084e2 107 Hamap MF_01272 Heme oxygenase (staphylobilin-producing) [isdG]. 1 102 27.335 T 14-10-2018 IPR023953 Heme oxygenase IsdG GO:0004392|GO:0033212|GO:0055114 MC28_3822 4e0c15cfcd3d2416286469527b8084e2 107 SUPERFAMILY SSF54909 1 97 8.5E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 SUPERFAMILY SSF54106 110 153 2.22E-11 T 14-10-2018 MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 SMART SM00257 111 154 5.8E-12 T 14-10-2018 IPR018392 LysM domain MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 SMART SM00257 44 87 2.7E-12 T 14-10-2018 IPR018392 LysM domain MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 Gene3D G3DSA:2.40.10.420 246 278 1.1E-12 T 14-10-2018 MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 SUPERFAMILY SSF54106 43 87 9.68E-11 T 14-10-2018 MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 Gene3D G3DSA:3.10.350.10 97 161 1.7E-15 T 14-10-2018 IPR036779 LysM domain superfamily MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 Gene3D G3DSA:3.10.350.10 33 96 7.4E-17 T 14-10-2018 IPR036779 LysM domain superfamily MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 Pfam PF07486 Cell Wall Hydrolase 175 276 3.1E-23 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 Gene3D G3DSA:1.10.10.2520 162 241 3.3E-27 T 14-10-2018 MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 Pfam PF01476 LysM domain 112 153 1.4E-11 T 14-10-2018 IPR018392 LysM domain MC28_2932 1f92e188ed59eee5db1c285a0b8e2f71 278 Pfam PF01476 LysM domain 45 87 7.4E-14 T 14-10-2018 IPR018392 LysM domain MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 Gene3D G3DSA:1.10.8.540 494 583 1.1E-13 T 14-10-2018 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 9.2E-44 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 23 36 9.2E-44 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 9.2E-44 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 60 79 9.2E-44 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 9.2E-44 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 9.2E-44 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 Pfam PF00771 FHIPEP family 17 676 2.8E-199 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 PIRSF PIRSF005419 3 685 7.8E-183 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 Gene3D G3DSA:1.10.490.80 587 684 2.9E-5 T 14-10-2018 MC28_0915 5b5865f5b5947313d5a436fd3d0e1a72 685 Gene3D G3DSA:3.40.30.60 349 493 4.4E-36 T 14-10-2018 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 SUPERFAMILY SSF49299 771 856 2.75E-22 T 14-10-2018 IPR035986 PKD domain superfamily MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 Pfam PF08453 Peptidase family M9 N-terminal 97 278 1.3E-56 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 Gene3D G3DSA:1.10.390.20 520 657 5.9E-56 T 14-10-2018 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 Gene3D G3DSA:3.30.980.50 658 768 3.1E-45 T 14-10-2018 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 Gene3D G3DSA:2.60.40.10 769 855 6.7E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 Pfam PF01752 Collagenase 302 628 3.9E-83 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 SUPERFAMILY SSF89260 863 970 8.24E-29 T 14-10-2018 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 Pfam PF00801 PKD domain 796 847 6.1E-14 T 14-10-2018 IPR000601 PKD domain MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 SMART SM00089 775 857 4.3E-25 T 14-10-2018 IPR022409 PKD/Chitinase domain MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 Gene3D G3DSA:2.60.120.380 856 971 3.3E-24 T 14-10-2018 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 Gene3D G3DSA:1.10.1740.190 376 519 1.9E-60 T 14-10-2018 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 449 463 1.2E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 529 544 1.2E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 503 521 1.2E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 466 482 1.2E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2678 1c7c146b189b4c1a44fed169a9ddb6c5 971 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 163 181 1.2E-32 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 MC28_2131 0ebaa4c3a485497f2dcb7ef9a4c897ec 181 Gene3D G3DSA:1.10.357.10 6 181 6.2E-32 T 14-10-2018 MC28_2131 0ebaa4c3a485497f2dcb7ef9a4c897ec 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 64 2.9E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2131 0ebaa4c3a485497f2dcb7ef9a4c897ec 181 SUPERFAMILY SSF46689 9 76 3.85E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1639 908e7a7cc6bc6f26a7f4fa3f1367e2e1 67 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 1.5E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_1639 908e7a7cc6bc6f26a7f4fa3f1367e2e1 67 SUPERFAMILY SSF50249 3 66 6.78E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_1639 908e7a7cc6bc6f26a7f4fa3f1367e2e1 67 SMART SM00357 4 67 4.3E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 MC28_1639 908e7a7cc6bc6f26a7f4fa3f1367e2e1 67 Gene3D G3DSA:2.40.50.140 2 66 3.9E-29 T 14-10-2018 MC28_1639 908e7a7cc6bc6f26a7f4fa3f1367e2e1 67 PIRSF PIRSF002599 1 67 1.6E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 MC28_1639 908e7a7cc6bc6f26a7f4fa3f1367e2e1 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 34 - T 14-10-2018 IPR019844 Cold-shock conserved site MC28_1639 908e7a7cc6bc6f26a7f4fa3f1367e2e1 67 PRINTS PR00050 Cold shock protein signature 40 58 2.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_1639 908e7a7cc6bc6f26a7f4fa3f1367e2e1 67 PRINTS PR00050 Cold shock protein signature 5 20 2.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_1639 908e7a7cc6bc6f26a7f4fa3f1367e2e1 67 PRINTS PR00050 Cold shock protein signature 25 34 2.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 Gene3D G3DSA:2.130.10.10 153 204 8.6E-18 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 Pfam PF10282 Lactonase, 7-bladed beta-propeller 157 222 1.2E-6 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 Pfam PF10282 Lactonase, 7-bladed beta-propeller 272 432 6.4E-16 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 SUPERFAMILY SSF50974 152 448 1.96E-81 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 161 197 2.6E-12 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 366 407 4.7E-11 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 282 323 1.7E-10 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 198 239 1.2E-13 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 240 281 5.4E-11 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 408 448 1.0E-15 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 324 365 1.5E-9 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 Gene3D G3DSA:2.130.10.10 297 449 5.0E-53 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_E111 411137fb4bf470da72c3a9d80174ab0b 449 Gene3D G3DSA:2.130.10.10 205 296 5.0E-34 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_0409 426c37c5025e9bd139de8fb81494e3e9 554 Gene3D G3DSA:3.90.76.10 82 204 3.9E-176 T 14-10-2018 MC28_0409 426c37c5025e9bd139de8fb81494e3e9 554 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 474 3.9E-74 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_0409 426c37c5025e9bd139de8fb81494e3e9 554 SUPERFAMILY SSF53850 46 548 7.06E-120 T 14-10-2018 MC28_0409 426c37c5025e9bd139de8fb81494e3e9 554 PIRSF PIRSF002741 4 554 1.7E-101 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_0409 426c37c5025e9bd139de8fb81494e3e9 554 Gene3D G3DSA:3.40.190.10 63 542 3.9E-176 T 14-10-2018 MC28_0409 426c37c5025e9bd139de8fb81494e3e9 554 Gene3D G3DSA:3.10.105.10 304 525 3.9E-176 T 14-10-2018 MC28_1450 2efbb5761b05f7795f505a0303a75b3d 166 Pfam PF02698 DUF218 domain 19 156 5.9E-30 T 14-10-2018 IPR003848 Domain of unknown function DUF218 MC28_1450 2efbb5761b05f7795f505a0303a75b3d 166 Gene3D G3DSA:3.40.50.620 39 151 5.1E-7 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_4237 7992958579b1267fc4a69a30a23aef2f 159 Gene3D G3DSA:3.90.960.10 1 155 4.3E-32 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 MC28_4237 7992958579b1267fc4a69a30a23aef2f 159 SUPERFAMILY SSF55826 2 146 4.58E-34 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 MC28_4237 7992958579b1267fc4a69a30a23aef2f 159 Pfam PF04073 Aminoacyl-tRNA editing domain 44 142 6.9E-21 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 MC28_D078 de5d12c7de4cc9a5b5cfe593760e51d7 298 SUPERFAMILY SSF52540 16 293 5.83E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_D078 de5d12c7de4cc9a5b5cfe593760e51d7 298 Gene3D G3DSA:3.40.50.300 8 296 5.7E-68 T 14-10-2018 MC28_D078 de5d12c7de4cc9a5b5cfe593760e51d7 298 Pfam PF13614 AAA domain 18 208 5.6E-38 T 14-10-2018 IPR025669 AAA domain MC28_F060 ada7a712ee1a42acf0058cfb53d89248 350 Pfam PF02661 Fic/DOC family 108 215 1.5E-10 T 14-10-2018 IPR003812 Fido domain MC28_F060 ada7a712ee1a42acf0058cfb53d89248 350 Gene3D G3DSA:1.10.3290.10 20 285 2.6E-30 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_F060 ada7a712ee1a42acf0058cfb53d89248 350 SUPERFAMILY SSF140931 96 285 2.88E-22 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_0272 3a1367d8fc3b997a9bd3baa958b5c28b 423 Pfam PF01098 Cell cycle protein 79 412 4.6E-37 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_4115 6d6c400bbf20f832451111aebad8bdc1 625 Pfam PF02687 FtsX-like permease family 61 146 8.8E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_4115 6d6c400bbf20f832451111aebad8bdc1 625 PIRSF PIRSF018968 1 625 1.1E-116 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_2534 d63325f01311139260c8ea32bf04e1b4 168 PIRSF PIRSF008757 12 168 7.5E-62 T 14-10-2018 IPR010371 Uncharacterised protein family UPF0303 MC28_2534 d63325f01311139260c8ea32bf04e1b4 168 Hamap MF_00761 UPF0303 protein . 14 168 32.377 T 14-10-2018 IPR010371 Uncharacterised protein family UPF0303 MC28_2534 d63325f01311139260c8ea32bf04e1b4 168 Pfam PF03928 Haem-degrading 36 163 4.4E-30 T 14-10-2018 IPR005624 Haem-degrading MC28_2534 d63325f01311139260c8ea32bf04e1b4 168 Gene3D G3DSA:3.30.450.150 6 168 2.3E-51 T 14-10-2018 IPR038084 GlcG-like domain superfamily MC28_2534 d63325f01311139260c8ea32bf04e1b4 168 SUPERFAMILY SSF143744 28 166 5.62E-26 T 14-10-2018 IPR038084 GlcG-like domain superfamily MC28_0269 c31e990015cc07ca265c100b59605398 560 Gene3D G3DSA:3.30.9.10 102 343 2.2E-134 T 14-10-2018 MC28_0269 c31e990015cc07ca265c100b59605398 560 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 371 381 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_0269 c31e990015cc07ca265c100b59605398 560 SUPERFAMILY SSF54373 249 342 5.76E-11 T 14-10-2018 MC28_0269 c31e990015cc07ca265c100b59605398 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 8.5E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_0269 c31e990015cc07ca265c100b59605398 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 336 342 8.5E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_0269 c31e990015cc07ca265c100b59605398 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 8.5E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_0269 c31e990015cc07ca265c100b59605398 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 49 61 8.5E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_0269 c31e990015cc07ca265c100b59605398 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 43 8.5E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_0269 c31e990015cc07ca265c100b59605398 560 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 8.5E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_0269 c31e990015cc07ca265c100b59605398 560 SUPERFAMILY SSF51905 16 237 6.8E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0269 c31e990015cc07ca265c100b59605398 560 Pfam PF01266 FAD dependent oxidoreductase 21 344 4.4E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MC28_0269 c31e990015cc07ca265c100b59605398 560 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 404 531 3.2E-21 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_0269 c31e990015cc07ca265c100b59605398 560 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 25 42 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_0269 c31e990015cc07ca265c100b59605398 560 Gene3D G3DSA:3.50.50.60 18 379 2.2E-134 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0269 c31e990015cc07ca265c100b59605398 560 Gene3D G3DSA:1.10.8.870 421 551 9.9E-39 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_1778 e8b2919f6e355bea103b3777dfe17d03 364 SUPERFAMILY SSF46689 55 103 4.93E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1778 e8b2919f6e355bea103b3777dfe17d03 364 SUPERFAMILY SSF46689 2 52 2.02E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1778 e8b2919f6e355bea103b3777dfe17d03 364 Gene3D G3DSA:1.10.10.60 57 119 2.7E-8 T 14-10-2018 MC28_1778 e8b2919f6e355bea103b3777dfe17d03 364 Gene3D G3DSA:1.10.10.60 1 56 4.7E-14 T 14-10-2018 MC28_1778 e8b2919f6e355bea103b3777dfe17d03 364 SMART SM00342 19 101 2.2E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_1778 e8b2919f6e355bea103b3777dfe17d03 364 Pfam PF12833 Helix-turn-helix domain 26 101 3.6E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 Gene3D G3DSA:3.40.50.300 94 371 5.7E-128 T 14-10-2018 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 Gene3D G3DSA:1.20.150.20 372 499 6.2E-51 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 51.58 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 486 1.2E-45 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 Gene3D G3DSA:2.40.30.20 1 93 2.6E-37 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 SUPERFAMILY SSF50615 10 94 7.46E-31 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 4.1E-258 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 PIRSF PIRSF039088 1 501 9.4E-251 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 SUPERFAMILY SSF52540 95 370 2.15E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 2.2E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 SUPERFAMILY SSF47917 372 500 2.22E-46 T 14-10-2018 MC28_4544 4b32a437bc85abbc909b9cab42e49245 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.3E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 445 35.916 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 428 8.3E-191 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 SUPERFAMILY SSF52540 43 355 8.35E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 Gene3D G3DSA:1.10.260.30 328 447 2.1E-44 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 Pfam PF02978 Signal peptide binding domain 329 427 8.7E-34 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 Gene3D G3DSA:3.40.50.300 91 286 4.4E-130 T 14-10-2018 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 SUPERFAMILY SSF47446 329 430 1.8E-37 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 SMART SM00382 100 302 3.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 Gene3D G3DSA:1.20.120.140 6 307 4.4E-130 T 14-10-2018 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 SMART SM00963 2 87 4.9E-34 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 1.8E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 SMART SM00962 101 297 7.4E-122 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_3068 ca148282ab4ae1b4fbb06da93a482e2f 449 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 1.4E-79 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_0098 df2f5b338a8f035049eccb31a3e3a8fb 304 Gene3D G3DSA:3.40.50.10490 10 227 4.6E-73 T 14-10-2018 MC28_0098 df2f5b338a8f035049eccb31a3e3a8fb 304 Pfam PF13580 SIS domain 46 173 7.1E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 MC28_0098 df2f5b338a8f035049eccb31a3e3a8fb 304 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 194 211 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 MC28_0098 df2f5b338a8f035049eccb31a3e3a8fb 304 Gene3D G3DSA:1.10.8.1080 228 304 4.5E-28 T 14-10-2018 MC28_0098 df2f5b338a8f035049eccb31a3e3a8fb 304 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 15 304 5.4E-115 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 MC28_0098 df2f5b338a8f035049eccb31a3e3a8fb 304 SUPERFAMILY SSF53697 15 257 1.71E-66 T 14-10-2018 MC28_0098 df2f5b338a8f035049eccb31a3e3a8fb 304 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 11 304 42.157 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 MC28_2512 adcd99b38c45cef04f9ca61cc8650d52 222 Hamap MF_00494 Probable transaldolase [tal]. 1 221 45.608 T 14-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MC28_2512 adcd99b38c45cef04f9ca61cc8650d52 222 ProSitePatterns PS00958 Transaldolase active site. 87 104 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 MC28_2512 adcd99b38c45cef04f9ca61cc8650d52 222 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 MC28_2512 adcd99b38c45cef04f9ca61cc8650d52 222 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 216 7.6E-57 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 MC28_2512 adcd99b38c45cef04f9ca61cc8650d52 222 Gene3D G3DSA:3.20.20.70 1 221 1.2E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2512 adcd99b38c45cef04f9ca61cc8650d52 222 SUPERFAMILY SSF51569 1 219 9.32E-74 T 14-10-2018 MC28_2512 adcd99b38c45cef04f9ca61cc8650d52 222 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 219 1.7E-81 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MC28_D135 6e44bc5b002a69dd979f401a8c1702d3 223 Gene3D G3DSA:1.10.260.40 4 80 8.5E-7 T 14-10-2018 MC28_0376 ed56148b46e2787e462dfa185bb41075 433 Pfam PF00128 Alpha amylase, catalytic domain 192 285 6.0E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_0376 ed56148b46e2787e462dfa185bb41075 433 Pfam PF00128 Alpha amylase, catalytic domain 70 139 6.5E-25 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_0376 ed56148b46e2787e462dfa185bb41075 433 Gene3D G3DSA:3.20.20.80 146 316 1.9E-29 T 14-10-2018 MC28_0376 ed56148b46e2787e462dfa185bb41075 433 SUPERFAMILY SSF51011 321 401 7.2E-11 T 14-10-2018 MC28_0376 ed56148b46e2787e462dfa185bb41075 433 SMART SM00642 42 312 4.9E-16 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_0376 ed56148b46e2787e462dfa185bb41075 433 SUPERFAMILY SSF51445 33 319 4.03E-53 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_0376 ed56148b46e2787e462dfa185bb41075 433 Gene3D G3DSA:2.60.40.1180 317 411 9.1E-35 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_0376 ed56148b46e2787e462dfa185bb41075 433 Gene3D G3DSA:3.20.20.80 32 145 5.9E-42 T 14-10-2018 MC28_1875 69118a2e07b564fc554d3242c2dce667 313 SUPERFAMILY SSF53590 8 312 2.75E-80 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_1875 69118a2e07b564fc554d3242c2dce667 313 Gene3D G3DSA:3.90.245.10 4 313 1.1E-75 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_1875 69118a2e07b564fc554d3242c2dce667 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 9 305 2.8E-64 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain MC28_3323 264ddfc233f6581cadb77806589715cc 53 Pfam PF12841 YvrJ protein family 7 41 1.5E-18 T 14-10-2018 IPR024419 Protein of unknown function YvrJ MC28_1280 b114304068671ce891acc0d5f055b443 246 SUPERFAMILY SSF55166 91 236 4.97E-36 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_1280 b114304068671ce891acc0d5f055b443 246 Gene3D G3DSA:3.30.1380.10 36 246 3.1E-76 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_1280 b114304068671ce891acc0d5f055b443 246 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 99 227 6.7E-45 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 MC28_G367 1fa7bdf3ab6d07f90f4a51c3512b4286 348 Pfam PF08239 Bacterial SH3 domain 220 263 1.6E-6 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_G367 1fa7bdf3ab6d07f90f4a51c3512b4286 348 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 49 168 2.8E-13 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_G367 1fa7bdf3ab6d07f90f4a51c3512b4286 348 Gene3D G3DSA:3.40.80.10 20 202 8.6E-53 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_G367 1fa7bdf3ab6d07f90f4a51c3512b4286 348 SMART SM00644 34 168 1.2E-20 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_G367 1fa7bdf3ab6d07f90f4a51c3512b4286 348 Gene3D G3DSA:2.30.30.40 219 269 1.7E-8 T 14-10-2018 MC28_G367 1fa7bdf3ab6d07f90f4a51c3512b4286 348 SMART SM00287 211 269 0.0025 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_G367 1fa7bdf3ab6d07f90f4a51c3512b4286 348 SUPERFAMILY SSF55846 34 185 1.3E-32 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_4936 74200dd832454e9cbb8b002e5472e2ac 507 SMART SM00490 254 335 1.3E-34 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4936 74200dd832454e9cbb8b002e5472e2ac 507 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 2 506 46.639 T 14-10-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 MC28_4936 74200dd832454e9cbb8b002e5472e2ac 507 Gene3D G3DSA:3.40.50.300 1 207 2.3E-77 T 14-10-2018 MC28_4936 74200dd832454e9cbb8b002e5472e2ac 507 SUPERFAMILY SSF52540 71 356 2.16E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4936 74200dd832454e9cbb8b002e5472e2ac 507 Gene3D G3DSA:3.40.50.300 211 432 8.1E-55 T 14-10-2018 MC28_4936 74200dd832454e9cbb8b002e5472e2ac 507 SMART SM00487 21 218 8.2E-66 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_4936 74200dd832454e9cbb8b002e5472e2ac 507 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site MC28_4936 74200dd832454e9cbb8b002e5472e2ac 507 Pfam PF00271 Helicase conserved C-terminal domain 227 335 5.2E-29 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4936 74200dd832454e9cbb8b002e5472e2ac 507 Pfam PF00270 DEAD/DEAH box helicase 26 190 1.2E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MC28_0719 e08ddb9c5d90947ae1c591cbcd2d4261 509 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 348 4.9E-104 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 MC28_0719 e08ddb9c5d90947ae1c591cbcd2d4261 509 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 130 139 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site MC28_0719 e08ddb9c5d90947ae1c591cbcd2d4261 509 Pfam PF00270 DEAD/DEAH box helicase 19 177 9.0E-23 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MC28_0719 e08ddb9c5d90947ae1c591cbcd2d4261 509 SMART SM00487 12 207 6.2E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_0719 e08ddb9c5d90947ae1c591cbcd2d4261 509 Pfam PF00271 Helicase conserved C-terminal domain 226 322 4.8E-17 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_0719 e08ddb9c5d90947ae1c591cbcd2d4261 509 Gene3D G3DSA:3.40.50.300 1 197 3.4E-67 T 14-10-2018 MC28_0719 e08ddb9c5d90947ae1c591cbcd2d4261 509 SMART SM00490 241 323 1.9E-23 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_0719 e08ddb9c5d90947ae1c591cbcd2d4261 509 SUPERFAMILY SSF52540 55 344 3.42E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3193 e89306733698fe727d6e802f45b05670 171 Pfam PF08761 dUTPase 4 171 1.3E-45 T 14-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 MC28_3193 e89306733698fe727d6e802f45b05670 171 PIRSF PIRSF030140 3 171 2.3E-53 T 14-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 MC28_3193 e89306733698fe727d6e802f45b05670 171 SUPERFAMILY SSF101386 4 171 1.67E-43 T 14-10-2018 MC28_3193 e89306733698fe727d6e802f45b05670 171 Gene3D G3DSA:1.10.4010.10 2 171 6.0E-16 T 14-10-2018 MC28_G041 be41abeb6cb841a6272c83c7c014d402 366 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 200 347 2.4E-11 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 MC28_G041 be41abeb6cb841a6272c83c7c014d402 366 SUPERFAMILY SSF53756 17 116 4.32E-5 T 14-10-2018 MC28_G041 be41abeb6cb841a6272c83c7c014d402 366 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 5 304 2.0E-94 T 14-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase MC28_G041 be41abeb6cb841a6272c83c7c014d402 366 Gene3D G3DSA:3.40.50.11190 4 177 2.5E-47 T 14-10-2018 MC28_G041 be41abeb6cb841a6272c83c7c014d402 366 SUPERFAMILY SSF53756 196 362 4.4E-11 T 14-10-2018 MC28_G041 be41abeb6cb841a6272c83c7c014d402 366 Gene3D G3DSA:3.40.50.2000 178 321 1.1E-41 T 14-10-2018 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.2E-5 T 14-10-2018 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 1.2E-5 T 14-10-2018 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 SUPERFAMILY SSF51905 7 261 1.57E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 Gene3D G3DSA:3.50.50.60 2 224 3.1E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 Gene3D G3DSA:3.50.50.60 296 458 2.0E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 9.2E-295 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 Gene3D G3DSA:1.10.10.1800 459 549 1.9E-25 T 14-10-2018 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 42.528 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 SMART SM01228 545 616 8.4E-43 T 14-10-2018 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 Pfam PF13932 GidA associated domain 401 615 7.5E-79 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 Gene3D G3DSA:1.10.150.570 568 620 1.2E-23 T 14-10-2018 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 Pfam PF01134 Glucose inhibited division protein A 9 398 4.0E-172 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 MC28_4715 47b7c4ab5c711d2937a044238c240dd7 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 MC28_1628 bd9e67d33b151f38932efb4295237f18 187 PIRSF PIRSF000440 1 186 1.1E-75 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 MC28_1628 bd9e67d33b151f38932efb4295237f18 187 SMART SM01059 1 177 6.4E-83 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 MC28_1628 bd9e67d33b151f38932efb4295237f18 187 Gene3D G3DSA:3.30.559.10 1 180 6.1E-58 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 MC28_1628 bd9e67d33b151f38932efb4295237f18 187 Pfam PF00302 Chloramphenicol acetyltransferase 1 177 1.6E-74 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 MC28_1628 bd9e67d33b151f38932efb4295237f18 187 SUPERFAMILY SSF52777 1 183 4.13E-64 T 14-10-2018 MC28_1628 bd9e67d33b151f38932efb4295237f18 187 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 158 168 - T 14-10-2018 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 MC28_1628 bd9e67d33b151f38932efb4295237f18 187 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 1 176 8.0E-90 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 MC28_F213 b859b2554b6738f3c0f42766d52f945f 113 Gene3D G3DSA:1.10.10.10 4 113 2.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F213 b859b2554b6738f3c0f42766d52f945f 113 SMART SM00345 11 70 3.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_F213 b859b2554b6738f3c0f42766d52f945f 113 SUPERFAMILY SSF46785 4 79 1.55E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_F213 b859b2554b6738f3c0f42766d52f945f 113 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 70 4.7E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3691 1d2f7a151fcbdb3eabf0f981138c51b6 213 Pfam PF13921 Myb-like DNA-binding domain 8 62 2.8E-5 T 14-10-2018 MC28_3691 1d2f7a151fcbdb3eabf0f981138c51b6 213 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 2 85 2.9E-44 T 14-10-2018 IPR014243 Transcription factor, RsfA MC28_3329 160ed69dcdac034288aaeb319f8f7f0b 219 Hamap MF_01680 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [mtnX]. 1 215 50.583 T 14-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 MC28_3329 160ed69dcdac034288aaeb319f8f7f0b 219 Gene3D G3DSA:3.40.50.1000 5 209 2.6E-71 T 14-10-2018 IPR023214 HAD superfamily MC28_3329 160ed69dcdac034288aaeb319f8f7f0b 219 Gene3D G3DSA:3.90.1470.20 14 133 2.6E-71 T 14-10-2018 MC28_3329 160ed69dcdac034288aaeb319f8f7f0b 219 TIGRFAM TIGR03333 salvage_mtnX: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase 4 217 5.5E-119 T 14-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 MC28_3329 160ed69dcdac034288aaeb319f8f7f0b 219 SUPERFAMILY SSF56784 3 217 2.25E-55 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3329 160ed69dcdac034288aaeb319f8f7f0b 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 176 3.6E-19 T 14-10-2018 MC28_3329 160ed69dcdac034288aaeb319f8f7f0b 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 177 2.7E-33 T 14-10-2018 MC28_3329 160ed69dcdac034288aaeb319f8f7f0b 219 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 185 2.7E-51 T 14-10-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 MC28_3810 c4d183328f19c53b7d067e3896af8a0a 167 SUPERFAMILY SSF109854 8 152 4.88E-33 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_3810 c4d183328f19c53b7d067e3896af8a0a 167 Gene3D G3DSA:1.20.120.450 1 150 5.2E-47 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_3810 c4d183328f19c53b7d067e3896af8a0a 167 Pfam PF05163 DinB family 1 159 1.0E-32 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB MC28_5410 f67f16ba0fe8637afc1bb41892b2d55e 66 SMART SM00530 1 55 2.3E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5410 f67f16ba0fe8637afc1bb41892b2d55e 66 SUPERFAMILY SSF47413 1 61 6.44E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_5410 f67f16ba0fe8637afc1bb41892b2d55e 66 Gene3D G3DSA:1.10.260.40 1 61 6.9E-22 T 14-10-2018 MC28_5410 f67f16ba0fe8637afc1bb41892b2d55e 66 Pfam PF01381 Helix-turn-helix 1 54 8.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3746 04499ce25f40bb90248aaa3cf8d783e3 198 PIRSF PIRSF006305 4 197 1.5E-64 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 MC28_3746 04499ce25f40bb90248aaa3cf8d783e3 198 Gene3D G3DSA:3.90.950.10 8 195 9.8E-75 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like MC28_3746 04499ce25f40bb90248aaa3cf8d783e3 198 SUPERFAMILY SSF52972 8 190 1.24E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like MC28_3746 04499ce25f40bb90248aaa3cf8d783e3 198 Hamap MF_00528 Septum formation protein Maf [maf]. 10 195 33.669 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 MC28_3746 04499ce25f40bb90248aaa3cf8d783e3 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 9 189 4.6E-65 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 MC28_3746 04499ce25f40bb90248aaa3cf8d783e3 198 Pfam PF02545 Maf-like protein 10 190 4.5E-61 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 MC28_2239 a89e195673a8391fd6a5c5e3e2f56cbf 214 Gene3D G3DSA:2.60.120.10 18 127 9.3E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_2239 a89e195673a8391fd6a5c5e3e2f56cbf 214 SUPERFAMILY SSF51182 42 149 4.69E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_2239 a89e195673a8391fd6a5c5e3e2f56cbf 214 Pfam PF07883 Cupin domain 50 116 4.3E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_4700 2a25458dc92628107672319271dd11ea 451 Gene3D G3DSA:1.10.860.10 3 168 3.7E-64 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal MC28_4700 2a25458dc92628107672319271dd11ea 451 Pfam PF00772 DnaB-like helicase N terminal domain 12 113 2.7E-35 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 MC28_4700 2a25458dc92628107672319271dd11ea 451 Pfam PF03796 DnaB-like helicase C terminal domain 187 442 5.7E-118 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 MC28_4700 2a25458dc92628107672319271dd11ea 451 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 12 444 4.3E-187 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 MC28_4700 2a25458dc92628107672319271dd11ea 451 SUPERFAMILY SSF48024 10 121 4.18E-38 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 MC28_4700 2a25458dc92628107672319271dd11ea 451 Gene3D G3DSA:3.40.50.300 169 450 2.5E-117 T 14-10-2018 MC28_4700 2a25458dc92628107672319271dd11ea 451 SUPERFAMILY SSF52540 185 435 6.43E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 323 39.241 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 Gene3D G3DSA:3.40.50.720 1 188 2.4E-66 T 14-10-2018 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 SUPERFAMILY SSF51735 3 179 5.56E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 PIRSF PIRSF000114 1 333 4.3E-111 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 161 1.0E-57 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 Gene3D G3DSA:1.10.1040.10 190 336 4.2E-54 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 321 1.3E-55 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 3.5E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 3.5E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 3.5E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 3.5E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 3.5E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 3.5E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 SUPERFAMILY SSF48179 181 332 9.52E-59 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_0739 3216ed9fe4f599482a7538bf8348eb3e 340 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 MC28_1402 a0c7087961687c1c7ba6d1f67bf49c69 159 Pfam PF01980 Uncharacterised protein family UPF0066 25 132 7.9E-31 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain MC28_1402 a0c7087961687c1c7ba6d1f67bf49c69 159 SUPERFAMILY SSF118196 1 153 1.57E-46 T 14-10-2018 IPR036413 YaeB-like superfamily MC28_1402 a0c7087961687c1c7ba6d1f67bf49c69 159 Gene3D G3DSA:2.40.30.70 2 134 9.7E-33 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily MC28_0393 3e9f98daf6e59060c4cf8a5675ea49ef 290 Gene3D G3DSA:3.40.50.720 154 230 2.5E-6 T 14-10-2018 MC28_0393 3e9f98daf6e59060c4cf8a5675ea49ef 290 SUPERFAMILY SSF51735 12 234 2.26E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0393 3e9f98daf6e59060c4cf8a5675ea49ef 290 Gene3D G3DSA:3.90.25.10 169 243 2.5E-6 T 14-10-2018 MC28_0393 3e9f98daf6e59060c4cf8a5675ea49ef 290 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 132 2.0E-5 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_0393 3e9f98daf6e59060c4cf8a5675ea49ef 290 Gene3D G3DSA:3.40.50.720 12 151 8.4E-10 T 14-10-2018 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 Pfam PF03144 Elongation factor Tu domain 2 224 294 3.3E-12 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 Pfam PF00009 Elongation factor Tu GTP binding domain 7 200 3.4E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 Gene3D G3DSA:2.40.50.250 488 604 5.0E-128 T 14-10-2018 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 Pfam PF00679 Elongation factor G C-terminus 402 482 2.5E-25 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 SMART SM00838 400 488 9.8E-5 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 SUPERFAMILY SSF52540 3 211 3.56E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 155 1.3E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 PRINTS PR00315 GTP-binding elongation factor signature 54 62 2.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 PRINTS PR00315 GTP-binding elongation factor signature 10 23 2.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.6E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 Gene3D G3DSA:3.40.50.300 5 203 1.3E-66 T 14-10-2018 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 Gene3D G3DSA:2.40.30.10 204 304 1.2E-33 T 14-10-2018 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 Pfam PF14492 Elongation Factor G, domain II 333 382 3.5E-7 T 14-10-2018 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 Gene3D G3DSA:3.30.70.870 311 595 5.0E-128 T 14-10-2018 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 Gene3D G3DSA:3.30.70.240 394 487 5.0E-128 T 14-10-2018 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 SUPERFAMILY SSF54980 307 392 4.32E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 8 604 4.3E-290 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 SUPERFAMILY SSF50447 155 304 1.35E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_3242 c2033dec9967f702a3b1a6d9324bd62a 614 SUPERFAMILY SSF54980 403 518 3.36E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 Pfam PF01687 Riboflavin kinase 198 322 4.2E-38 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 33 80 6.2E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 PIRSF PIRSF004491 14 329 1.4E-105 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 33 322 5.1E-96 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 SUPERFAMILY SSF82114 188 326 4.58E-47 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 Pfam PF06574 FAD synthetase 30 181 1.4E-47 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 Gene3D G3DSA:3.40.50.620 17 199 1.1E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 SUPERFAMILY SSF52374 31 190 8.16E-29 T 14-10-2018 MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 Gene3D G3DSA:2.40.30.30 200 335 1.2E-44 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 MC28_3033 a5c12c3a8335b18a7d790785ac25175d 335 SMART SM00904 197 323 1.6E-61 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 MC28_G157 b134fa8d163bc5a4a7a1e18380e86e8d 458 PIRSF PIRSF500217 1 458 5.1E-139 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 MC28_G157 b134fa8d163bc5a4a7a1e18380e86e8d 458 PIRSF PIRSF016636 1 458 4.7E-136 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB MC28_G157 b134fa8d163bc5a4a7a1e18380e86e8d 458 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 136 365 7.9E-25 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT MC28_0999 f8b7474b46e1bd251a37d1a1c264dcfc 327 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 4 323 50.569 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 MC28_0999 f8b7474b46e1bd251a37d1a1c264dcfc 327 PIRSF PIRSF001555 1 327 7.5E-162 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 MC28_0999 f8b7474b46e1bd251a37d1a1c264dcfc 327 Gene3D G3DSA:3.30.930.10 5 323 2.6E-142 T 14-10-2018 MC28_0999 f8b7474b46e1bd251a37d1a1c264dcfc 327 Pfam PF03590 Aspartate-ammonia ligase 12 237 2.4E-106 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 MC28_0999 f8b7474b46e1bd251a37d1a1c264dcfc 327 SUPERFAMILY SSF55681 8 320 4.97E-88 T 14-10-2018 MC28_0999 f8b7474b46e1bd251a37d1a1c264dcfc 327 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 12 319 4.5E-103 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 MC28_2174 d930f4b358b8a01b6d82071a4e574cfc 347 Gene3D G3DSA:1.10.10.10 265 344 7.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2174 d930f4b358b8a01b6d82071a4e574cfc 347 Pfam PF01022 Bacterial regulatory protein, arsR family 276 320 7.6E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2174 d930f4b358b8a01b6d82071a4e574cfc 347 SUPERFAMILY SSF46785 268 345 4.64E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2174 d930f4b358b8a01b6d82071a4e574cfc 347 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 271 286 9.4E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2174 d930f4b358b8a01b6d82071a4e574cfc 347 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 303 318 9.4E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2174 d930f4b358b8a01b6d82071a4e574cfc 347 SMART SM00418 269 343 3.9E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_1071 3a0a0bad010a6142bec268f877895509 76 Hamap MF_01103 UPF0291 protein . 1 58 13.711 T 14-10-2018 IPR009242 Protein of unknown function DUF896 MC28_1071 3a0a0bad010a6142bec268f877895509 76 Pfam PF05979 Bacterial protein of unknown function (DUF896) 4 64 3.2E-24 T 14-10-2018 IPR009242 Protein of unknown function DUF896 MC28_1071 3a0a0bad010a6142bec268f877895509 76 Gene3D G3DSA:1.10.287.540 1 55 1.2E-16 T 14-10-2018 MC28_1071 3a0a0bad010a6142bec268f877895509 76 SUPERFAMILY SSF158221 1 40 3.14E-12 T 14-10-2018 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 PIRSF PIRSF000188 3 355 5.8E-166 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 76 89 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 SUPERFAMILY SSF53223 6 145 8.64E-48 T 14-10-2018 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 SUPERFAMILY SSF51735 143 349 1.52E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3456 79e96184240f56cc72e15d59f737abb2 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 134 156 6.3E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 288 299 6.3E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 68 82 6.3E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 178 198 6.3E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 Gene3D G3DSA:3.40.50.720 136 338 8.6E-153 T 14-10-2018 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 Gene3D G3DSA:3.40.50.10860 12 345 8.6E-153 T 14-10-2018 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 SMART SM00839 146 353 1.3E-69 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 17 132 1.2E-26 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 150 202 2.8E-5 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_3456 79e96184240f56cc72e15d59f737abb2 366 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 219 349 1.8E-10 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 SUPERFAMILY SSF49452 584 684 6.62E-16 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 Pfam PF00686 Starch binding domain 585 677 2.9E-10 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 SUPERFAMILY SSF51445 13 407 8.13E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 SUPERFAMILY SSF51011 410 495 4.8E-22 T 14-10-2018 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 Pfam PF01833 IPT/TIG domain 514 573 2.4E-6 T 14-10-2018 IPR002909 IPT domain MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 Pfam PF00128 Alpha amylase, catalytic domain 56 375 8.9E-67 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 Gene3D G3DSA:3.20.20.80 8 403 3.1E-143 T 14-10-2018 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 SUPERFAMILY SSF81296 499 575 2.18E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 Gene3D G3DSA:2.60.40.10 582 684 2.8E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 PRINTS PR00110 Alpha-amylase signature 226 237 2.4E-5 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 PRINTS PR00110 Alpha-amylase signature 321 333 2.4E-5 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 PRINTS PR00110 Alpha-amylase signature 132 143 2.4E-5 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 Gene3D G3DSA:2.60.40.10 500 581 1.6E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 SMART SM00642 23 401 3.8E-92 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 SMART SM00632 413 496 3.7E-11 T 14-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 MC28_G057 8d121909a3ba09fb51a5d82b3fbad637 694 Gene3D G3DSA:2.60.40.1180 404 497 1.2E-30 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_1576 0fc25083554582383c62b56f22f1e83c 538 Gene3D G3DSA:3.30.300.310 431 533 1.2E-31 T 14-10-2018 MC28_1576 0fc25083554582383c62b56f22f1e83c 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 519 4.2E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_1576 0fc25083554582383c62b56f22f1e83c 538 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_1576 0fc25083554582383c62b56f22f1e83c 538 Pfam PF00501 AMP-binding enzyme 32 435 6.0E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_1576 0fc25083554582383c62b56f22f1e83c 538 Gene3D G3DSA:3.40.50.980 181 353 2.5E-60 T 14-10-2018 MC28_1576 0fc25083554582383c62b56f22f1e83c 538 Gene3D G3DSA:2.30.38.10 354 429 1.0E-30 T 14-10-2018 MC28_1576 0fc25083554582383c62b56f22f1e83c 538 SUPERFAMILY SSF56801 5 531 1.96E-139 T 14-10-2018 MC28_1576 0fc25083554582383c62b56f22f1e83c 538 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 4 526 5.2E-249 T 14-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 MC28_1576 0fc25083554582383c62b56f22f1e83c 538 Gene3D G3DSA:3.40.50.980 22 179 3.5E-55 T 14-10-2018 MC28_0735 61dd87c47b42ec5f07ca4e2c754bba1a 211 PIRSF PIRSF036710 9 211 8.0E-92 T 14-10-2018 IPR014617 Predicted membrane protein, Bacillus YphA type MC28_1727 4c29d6f11eacb879c8e5284bb08b993c 217 Gene3D G3DSA:1.10.357.10 12 215 1.2E-36 T 14-10-2018 MC28_1727 4c29d6f11eacb879c8e5284bb08b993c 217 SUPERFAMILY SSF48498 102 215 6.99E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_1727 4c29d6f11eacb879c8e5284bb08b993c 217 SUPERFAMILY SSF46689 16 83 4.0E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1727 4c29d6f11eacb879c8e5284bb08b993c 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 1.3E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1727 4c29d6f11eacb879c8e5284bb08b993c 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 4.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_1727 4c29d6f11eacb879c8e5284bb08b993c 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 4.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 SUPERFAMILY SSF75553 484 687 1.96E-56 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 638 4.1E-29 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1179 0.0 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 SMART SM00968 519 638 4.0E-39 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 Gene3D G3DSA:3.40.50.300 988 1188 3.5E-53 T 14-10-2018 MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1181 24.475 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 SUPERFAMILY SSF52540 2 1177 3.52E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1172 4.8E-65 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 Gene3D G3DSA:3.30.70.1620 579 667 1.3E-67 T 14-10-2018 MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 PIRSF PIRSF005719 1 1187 0.0 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 Gene3D G3DSA:1.20.1060.20 495 680 1.3E-67 T 14-10-2018 MC28_3071 6c9425b2186dfd2933ba06cdf4f2c889 1189 Gene3D G3DSA:3.40.50.300 1 180 2.3E-55 T 14-10-2018 MC28_G147 e4c309264b90814b6c4063d6ed4431b8 234 Gene3D G3DSA:1.10.10.10 125 227 5.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G147 e4c309264b90814b6c4063d6ed4431b8 234 SUPERFAMILY SSF46894 128 225 4.54E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_G147 e4c309264b90814b6c4063d6ed4431b8 234 Gene3D G3DSA:3.40.50.2300 1 124 1.3E-30 T 14-10-2018 MC28_G147 e4c309264b90814b6c4063d6ed4431b8 234 SUPERFAMILY SSF52172 2 125 1.85E-34 T 14-10-2018 IPR011006 CheY-like superfamily MC28_G147 e4c309264b90814b6c4063d6ed4431b8 234 SMART SM00862 149 224 4.7E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G147 e4c309264b90814b6c4063d6ed4431b8 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 8.8E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G147 e4c309264b90814b6c4063d6ed4431b8 234 Pfam PF00072 Response regulator receiver domain 4 112 3.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G147 e4c309264b90814b6c4063d6ed4431b8 234 SMART SM00448 2 112 1.6E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2915 433cf8cd10653174d046bb2645ec870b 883 SUPERFAMILY SSF141868 631 879 4.71E-83 T 14-10-2018 IPR035919 EAL domain superfamily MC28_2915 433cf8cd10653174d046bb2645ec870b 883 Pfam PF00990 Diguanylate cyclase, GGDEF domain 455 611 2.8E-44 T 14-10-2018 IPR000160 GGDEF domain MC28_2915 433cf8cd10653174d046bb2645ec870b 883 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 451 1.6E-16 T 14-10-2018 IPR000014 PAS domain MC28_2915 433cf8cd10653174d046bb2645ec870b 883 Pfam PF08448 PAS fold 342 445 2.7E-9 T 14-10-2018 IPR013656 PAS fold-4 MC28_2915 433cf8cd10653174d046bb2645ec870b 883 SUPERFAMILY SSF55073 461 617 2.43E-44 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_2915 433cf8cd10653174d046bb2645ec870b 883 Gene3D G3DSA:3.30.70.270 450 628 8.0E-54 T 14-10-2018 MC28_2915 433cf8cd10653174d046bb2645ec870b 883 Gene3D G3DSA:3.20.20.450 629 881 9.0E-94 T 14-10-2018 IPR035919 EAL domain superfamily MC28_2915 433cf8cd10653174d046bb2645ec870b 883 Gene3D G3DSA:3.30.450.20 320 449 3.2E-20 T 14-10-2018 MC28_2915 433cf8cd10653174d046bb2645ec870b 883 SMART SM00091 332 398 8.7E-7 T 14-10-2018 IPR000014 PAS domain MC28_2915 433cf8cd10653174d046bb2645ec870b 883 Pfam PF00563 EAL domain 632 867 8.4E-69 T 14-10-2018 IPR001633 EAL domain MC28_2915 433cf8cd10653174d046bb2645ec870b 883 SMART SM00267 444 616 8.6E-52 T 14-10-2018 IPR000160 GGDEF domain MC28_2915 433cf8cd10653174d046bb2645ec870b 883 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 453 614 2.2E-37 T 14-10-2018 IPR000160 GGDEF domain MC28_2915 433cf8cd10653174d046bb2645ec870b 883 SUPERFAMILY SSF55785 319 442 1.48E-17 T 14-10-2018 IPR035965 PAS domain superfamily MC28_2915 433cf8cd10653174d046bb2645ec870b 883 SMART SM00052 626 872 5.0E-109 T 14-10-2018 IPR001633 EAL domain MC28_1069 93f0db05c633ea8229603f2eab2b9be1 131 Pfam PF11070 Protein of unknown function (DUF2871) 1 128 3.2E-44 T 14-10-2018 IPR021299 Protein of unknown function DUF2871 MC28_0645 ab4598065f53984dadeceb635cc20be1 201 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 190 30.324 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 MC28_0645 ab4598065f53984dadeceb635cc20be1 201 Pfam PF00117 Glutamine amidotransferase class-I 5 187 3.5E-19 T 14-10-2018 IPR017926 Glutamine amidotransferase MC28_0645 ab4598065f53984dadeceb635cc20be1 201 Gene3D G3DSA:3.40.50.880 1 197 2.0E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0645 ab4598065f53984dadeceb635cc20be1 201 SUPERFAMILY SSF52317 1 190 4.44E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0645 ab4598065f53984dadeceb635cc20be1 201 PIRSF PIRSF000495 1 193 2.1E-65 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 MC28_0645 ab4598065f53984dadeceb635cc20be1 201 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 1 188 1.6E-66 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 183 1.8E-84 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 44 53 1.2E-13 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 161 174 1.2E-13 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 71 82 1.2E-13 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00097 Anthranilate synthase component II signature 44 53 4.7E-27 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00097 Anthranilate synthase component II signature 96 104 4.7E-27 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00097 Anthranilate synthase component II signature 116 128 4.7E-27 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00097 Anthranilate synthase component II signature 161 174 4.7E-27 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00097 Anthranilate synthase component II signature 71 82 4.7E-27 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 41 55 3.3E-6 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 71 87 3.3E-6 T 14-10-2018 MC28_4784 9a184eed48f2f64027e16f13512709ed 192 Pfam PF00117 Glutamine amidotransferase class-I 1 183 1.6E-54 T 14-10-2018 IPR017926 Glutamine amidotransferase MC28_4784 9a184eed48f2f64027e16f13512709ed 192 Gene3D G3DSA:3.40.50.880 1 185 4.6E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4784 9a184eed48f2f64027e16f13512709ed 192 SUPERFAMILY SSF52317 1 184 7.94E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_2446 0ee507bb3e978dd88efa98176d7f8d47 202 Gene3D G3DSA:1.10.1760.20 25 186 2.2E-21 T 14-10-2018 MC28_2446 0ee507bb3e978dd88efa98176d7f8d47 202 Pfam PF12822 ECF transporter, substrate-specific component 27 176 1.7E-11 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 MC28_2446 0ee507bb3e978dd88efa98176d7f8d47 202 PIRSF PIRSF037395 1 202 7.1E-77 T 14-10-2018 IPR017196 ECF transporter, predicted substrate-specific component UCP037395 MC28_4045 411371cfe001dcb980604872a5b2887d 281 Pfam PF12146 Serine aminopeptidase, S33 22 256 1.4E-58 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 MC28_4045 411371cfe001dcb980604872a5b2887d 281 SUPERFAMILY SSF53474 17 268 1.01E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4045 411371cfe001dcb980604872a5b2887d 281 Gene3D G3DSA:3.40.50.1820 5 274 4.7E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 SMART SM00534 323 508 2.0E-52 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 SMART SM00533 9 311 1.0E-20 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 SUPERFAMILY SSF48334 21 284 1.31E-22 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 Gene3D G3DSA:1.10.1420.10 22 277 1.6E-6 T 14-10-2018 MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 Gene3D G3DSA:1.10.1420.10 113 222 1.6E-6 T 14-10-2018 MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 Pfam PF00488 MutS domain V 326 507 1.0E-31 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 PIRSF PIRSF005814 570 633 0.23 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 PIRSF PIRSF005814 1 586 1.2E-207 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 Gene3D G3DSA:3.40.50.300 288 559 4.2E-68 T 14-10-2018 MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 405 421 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MC28_2634 a76d2aae03be9230e3469348fe7d3e80 633 SUPERFAMILY SSF52540 289 511 5.81E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1257 5470ced751ad1218ecc878c00f874293 205 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 4 58 3.1E-26 T 14-10-2018 MC28_1257 5470ced751ad1218ecc878c00f874293 205 SUPERFAMILY SSF55811 22 200 1.62E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_1257 5470ced751ad1218ecc878c00f874293 205 Pfam PF00293 NUDIX domain 73 178 2.2E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_1257 5470ced751ad1218ecc878c00f874293 205 Gene3D G3DSA:3.90.79.10 41 205 3.1E-45 T 14-10-2018 MC28_3410 4ad2bf652a1070238cbea373e9d0e263 371 SUPERFAMILY SSF53383 6 366 2.5E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3410 4ad2bf652a1070238cbea373e9d0e263 371 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 3 360 9.5E-136 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 MC28_3410 4ad2bf652a1070238cbea373e9d0e263 371 Gene3D G3DSA:3.90.1150.10 15 357 3.1E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3410 4ad2bf652a1070238cbea373e9d0e263 371 Gene3D G3DSA:3.40.640.10 33 268 3.1E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3410 4ad2bf652a1070238cbea373e9d0e263 371 Pfam PF00155 Aminotransferase class I and II 19 360 3.1E-66 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_3410 4ad2bf652a1070238cbea373e9d0e263 371 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 215 224 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 327 44.653 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 Gene3D G3DSA:1.10.3730.40 181 336 3.2E-71 T 14-10-2018 MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 SUPERFAMILY SSF51735 1 181 1.2E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 176 6.5E-77 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 PIRSF PIRSF000116 2 204 6.8E-44 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 PIRSF PIRSF000116 200 331 2.8E-15 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 182 325 7.4E-67 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 SUPERFAMILY SSF48179 182 327 2.04E-70 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 1.3E-140 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 MC28_1034 0262d5269b987bfe0e1b56cc09a552e7 337 Gene3D G3DSA:3.40.50.720 1 180 6.0E-79 T 14-10-2018 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 Pfam PF00989 PAS fold 219 290 1.4E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 SMART SM00387 422 533 3.2E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 428 532 3.4E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 Gene3D G3DSA:3.30.450.20 202 314 1.2E-20 T 14-10-2018 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 SUPERFAMILY SSF55785 210 312 1.97E-8 T 14-10-2018 IPR035965 PAS domain superfamily MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 SUPERFAMILY SSF103190 39 169 8.24E-42 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 Gene3D G3DSA:3.30.450.20 33 167 9.3E-50 T 14-10-2018 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 SMART SM00091 216 283 0.0046 T 14-10-2018 IPR000014 PAS domain MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 SUPERFAMILY SSF55890 325 408 1.15E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 SUPERFAMILY SSF55874 388 530 9.82E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 324 368 3.0E-9 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 Pfam PF17203 Single cache domain 3 40 170 2.5E-30 T 14-10-2018 IPR033463 Single cache domain 3 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 1.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 1.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 1.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 1.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5281 eb8d9060d46575e2eef5a6dd04460cea 536 Gene3D G3DSA:3.30.565.10 378 528 9.0E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2696 962c13ec0b9453cd1fb9830ce993c269 249 Pfam PF00106 short chain dehydrogenase 3 201 3.7E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2696 962c13ec0b9453cd1fb9830ce993c269 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2696 962c13ec0b9453cd1fb9830ce993c269 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2696 962c13ec0b9453cd1fb9830ce993c269 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2696 962c13ec0b9453cd1fb9830ce993c269 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2696 962c13ec0b9453cd1fb9830ce993c269 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2696 962c13ec0b9453cd1fb9830ce993c269 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_2696 962c13ec0b9453cd1fb9830ce993c269 249 Gene3D G3DSA:3.40.50.720 1 248 4.5E-52 T 14-10-2018 MC28_2696 962c13ec0b9453cd1fb9830ce993c269 249 SUPERFAMILY SSF51735 2 248 1.71E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3326 b425b8136ceea706ab606961f75514d9 280 Pfam PF00795 Carbon-nitrogen hydrolase 23 266 3.3E-49 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 MC28_3326 b425b8136ceea706ab606961f75514d9 280 SUPERFAMILY SSF56317 20 279 4.19E-75 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily MC28_3326 b425b8136ceea706ab606961f75514d9 280 Gene3D G3DSA:3.60.110.10 10 280 7.6E-94 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily MC28_G201 0e042474ee01edf0b59181a763fd00a7 312 SUPERFAMILY SSF48452 113 256 9.32E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_G201 0e042474ee01edf0b59181a763fd00a7 312 Pfam PF12844 Helix-turn-helix domain 9 67 1.0E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G201 0e042474ee01edf0b59181a763fd00a7 312 SUPERFAMILY SSF47413 5 65 3.75E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_G201 0e042474ee01edf0b59181a763fd00a7 312 SMART SM00530 9 63 5.2E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G201 0e042474ee01edf0b59181a763fd00a7 312 Gene3D G3DSA:1.25.40.10 1 298 4.0E-79 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_2450 8d044fb9fc780148a1bcc9e7f9fb80c0 733 SUPERFAMILY SSF48239 457 632 4.87E-27 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid MC28_2450 8d044fb9fc780148a1bcc9e7f9fb80c0 733 Pfam PF14478 Domain of unknown function (DUF4430) 60 129 7.2E-17 T 14-10-2018 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 MC28_2450 8d044fb9fc780148a1bcc9e7f9fb80c0 733 Gene3D G3DSA:1.50.10.20 432 650 2.2E-24 T 14-10-2018 MC28_2450 8d044fb9fc780148a1bcc9e7f9fb80c0 733 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 518 604 3.4E-6 T 14-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 MC28_2450 8d044fb9fc780148a1bcc9e7f9fb80c0 733 Gene3D G3DSA:3.10.20.490 32 131 3.2E-15 T 14-10-2018 MC28_2450 8d044fb9fc780148a1bcc9e7f9fb80c0 733 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 700 731 7.1E-4 T 14-10-2018 MC28_1969 859bcae55e528387d6af249f21b9fc38 291 Pfam PF00106 short chain dehydrogenase 14 201 2.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1969 859bcae55e528387d6af249f21b9fc38 291 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_1969 859bcae55e528387d6af249f21b9fc38 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1969 859bcae55e528387d6af249f21b9fc38 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1969 859bcae55e528387d6af249f21b9fc38 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 232 252 3.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1969 859bcae55e528387d6af249f21b9fc38 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 3.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1969 859bcae55e528387d6af249f21b9fc38 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 3.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1969 859bcae55e528387d6af249f21b9fc38 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1969 859bcae55e528387d6af249f21b9fc38 291 SUPERFAMILY SSF51735 13 285 5.14E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1969 859bcae55e528387d6af249f21b9fc38 291 Gene3D G3DSA:3.40.50.720 12 275 1.1E-67 T 14-10-2018 MC28_1969 859bcae55e528387d6af249f21b9fc38 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 5.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1969 859bcae55e528387d6af249f21b9fc38 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 5.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1969 859bcae55e528387d6af249f21b9fc38 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 5.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Gene3D G3DSA:3.50.50.60 111 245 1.1E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 5.5E-13 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.5E-13 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 5.5E-13 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 5.5E-13 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Pfam PF04324 BFD-like [2Fe-2S] binding domain 416 465 4.2E-15 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Pfam PF04324 BFD-like [2Fe-2S] binding domain 482 531 9.8E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 673 689 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 7 790 1.2E-297 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 SUPERFAMILY SSF51905 143 307 1.27E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Gene3D G3DSA:3.30.413.10 626 790 6.0E-34 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 SUPERFAMILY SSF56014 627 763 3.93E-45 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PIRSF PIRSF037149 1 802 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Gene3D G3DSA:3.30.390.30 318 396 2.4E-9 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 SUPERFAMILY SSF51905 1 193 3.77E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.9E-20 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 9.9E-20 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 9.9E-20 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 9.9E-20 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 9.9E-20 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 SUPERFAMILY SSF55124 494 618 3.6E-24 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Gene3D G3DSA:3.50.50.60 8 281 1.1E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 282 6.7E-57 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 627 760 1.6E-25 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 556 618 1.3E-10 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 Gene3D G3DSA:1.10.10.1100 416 471 8.4E-11 T 14-10-2018 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00397 Sirohaem Fe-binding site signature 630 648 6.5E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_1356 2671074ebf97741fd4493ea67d7e366f 803 PRINTS PR00397 Sirohaem Fe-binding site signature 673 691 6.5E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 MC28_4449 0bed31d18f0fd18cc963ccb5cc382af6 433 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 9 431 1.7E-179 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 MC28_4449 0bed31d18f0fd18cc963ccb5cc382af6 433 Pfam PF02378 Phosphotransferase system, EIIC 26 356 5.1E-71 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_4449 0bed31d18f0fd18cc963ccb5cc382af6 433 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 431 1.7E-179 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 MC28_4449 0bed31d18f0fd18cc963ccb5cc382af6 433 PIRSF PIRSF006351 1 433 3.5E-151 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 MC28_5284 b6e304ec772862f8da65b4b62ed67321 84 Gene3D G3DSA:2.40.50.100 1 77 1.8E-7 T 14-10-2018 MC28_2615 253b4d46b811142fd5762de04019f430 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 4.3E-67 T 14-10-2018 MC28_2615 253b4d46b811142fd5762de04019f430 253 Gene3D G3DSA:3.40.50.720 5 252 2.8E-80 T 14-10-2018 MC28_2615 253b4d46b811142fd5762de04019f430 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2615 253b4d46b811142fd5762de04019f430 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2615 253b4d46b811142fd5762de04019f430 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2615 253b4d46b811142fd5762de04019f430 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2615 253b4d46b811142fd5762de04019f430 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2615 253b4d46b811142fd5762de04019f430 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2615 253b4d46b811142fd5762de04019f430 253 SUPERFAMILY SSF51735 10 252 5.27E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2615 253b4d46b811142fd5762de04019f430 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2615 253b4d46b811142fd5762de04019f430 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 2.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2615 253b4d46b811142fd5762de04019f430 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1468 3d2cb8c508dd9b1384fbecaa7a444a99 285 SUPERFAMILY SSF55729 129 279 1.15E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1468 3d2cb8c508dd9b1384fbecaa7a444a99 285 Gene3D G3DSA:3.40.630.30 121 276 9.1E-15 T 14-10-2018 MC28_1468 3d2cb8c508dd9b1384fbecaa7a444a99 285 Pfam PF13527 Acetyltransferase (GNAT) domain 130 241 2.5E-9 T 14-10-2018 MC28_1468 3d2cb8c508dd9b1384fbecaa7a444a99 285 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 18 279 2.9E-103 T 14-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 MC28_2421 ece8a7344da6dadd2e367c7f15f1ea96 410 SUPERFAMILY SSF46955 1 113 2.49E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_2421 ece8a7344da6dadd2e367c7f15f1ea96 410 Gene3D G3DSA:1.10.1660.10 1 124 4.4E-16 T 14-10-2018 MC28_2421 ece8a7344da6dadd2e367c7f15f1ea96 410 Pfam PF13411 MerR HTH family regulatory protein 1 66 4.0E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_2421 ece8a7344da6dadd2e367c7f15f1ea96 410 SMART SM00422 1 68 0.0037 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4996 5c6401de0605593bceb729d0cc8ee6da 276 SUPERFAMILY SSF53335 67 239 1.47E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4996 5c6401de0605593bceb729d0cc8ee6da 276 Gene3D G3DSA:3.40.50.150 63 232 6.5E-19 T 14-10-2018 MC28_4996 5c6401de0605593bceb729d0cc8ee6da 276 Pfam PF08242 Methyltransferase domain 98 192 1.7E-12 T 14-10-2018 IPR013217 Methyltransferase type 12 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 SMART SM00382 148 411 7.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 SUPERFAMILY SSF50615 2 79 6.67E-28 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 Gene3D G3DSA:2.40.10.170 2 80 1.0E-32 T 14-10-2018 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 4.3E-259 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 Gene3D G3DSA:3.40.50.300 82 350 3.2E-116 T 14-10-2018 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 349 2.6E-68 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 57.865 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 SUPERFAMILY SSF47917 352 467 1.12E-52 T 14-10-2018 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 Gene3D G3DSA:1.10.1140.10 352 469 1.4E-56 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 78 1.8E-26 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_4542 8a7631b03c41dfce98dfe83a09fc8cb0 469 SUPERFAMILY SSF52540 82 354 4.49E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5282 987a21b9230b0f9b408e657a39bf6a53 230 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5282 987a21b9230b0f9b408e657a39bf6a53 230 PIRSF PIRSF006171 3 230 1.4E-82 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 MC28_5282 987a21b9230b0f9b408e657a39bf6a53 230 SUPERFAMILY SSF52172 5 146 1.57E-33 T 14-10-2018 IPR011006 CheY-like superfamily MC28_5282 987a21b9230b0f9b408e657a39bf6a53 230 SMART SM00448 5 118 9.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5282 987a21b9230b0f9b408e657a39bf6a53 230 Gene3D G3DSA:3.40.50.2300 2 146 1.1E-28 T 14-10-2018 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Pfam PF00009 Elongation factor Tu GTP binding domain 30 301 5.9E-71 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 SUPERFAMILY SSF54980 619 709 1.68E-31 T 14-10-2018 IPR035647 EF-G domain III/V-like MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 SUPERFAMILY SSF50447 284 423 9.09E-37 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Gene3D G3DSA:3.30.70.240 623 693 2.7E-95 T 14-10-2018 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 TIGRFAM TIGR00484 EF-G: translation elongation factor G 22 711 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Hamap MF_00054_B Elongation factor G [fusA]. 27 710 114.115 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 SMART SM00838 619 706 2.9E-59 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 PRINTS PR00315 GTP-binding elongation factor signature 33 46 5.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 PRINTS PR00315 GTP-binding elongation factor signature 99 109 5.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 PRINTS PR00315 GTP-binding elongation factor signature 151 160 5.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 PRINTS PR00315 GTP-binding elongation factor signature 79 87 5.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 PRINTS PR00315 GTP-binding elongation factor signature 115 126 5.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 SUPERFAMILY SSF52540 27 301 1.81E-112 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Pfam PF14492 Elongation Factor G, domain II 423 496 2.3E-36 T 14-10-2018 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 SUPERFAMILY SSF54980 421 499 7.19E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Pfam PF03144 Elongation factor Tu domain 2 343 410 2.7E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Pfam PF00679 Elongation factor G C-terminus 619 705 9.4E-33 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Gene3D G3DSA:3.40.50.300 22 312 5.2E-113 T 14-10-2018 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 72 87 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 SMART SM00889 499 617 1.3E-72 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Pfam PF03764 Elongation factor G, domain IV 498 616 1.0E-46 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 SUPERFAMILY SSF54211 498 618 8.6E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Gene3D G3DSA:3.30.70.870 425 502 1.1E-33 T 14-10-2018 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Gene3D G3DSA:3.30.230.10 503 706 2.7E-95 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 201 4.2E-44 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_4819 4d6aadd7a435316152e8e6157ab8f724 713 Gene3D G3DSA:2.40.30.10 313 424 8.5E-47 T 14-10-2018 MC28_2829 443ea5aabab1d84583e652cfd5ace214 244 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 2 244 5.4E-90 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 MC28_2829 443ea5aabab1d84583e652cfd5ace214 244 Gene3D G3DSA:1.10.3720.10 44 244 1.8E-31 T 14-10-2018 IPR035906 MetI-like superfamily MC28_2829 443ea5aabab1d84583e652cfd5ace214 244 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 241 2.4E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_2829 443ea5aabab1d84583e652cfd5ace214 244 SUPERFAMILY SSF161098 50 236 1.15E-33 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0171 b868fd02e4b02af91be8826a983b5218 387 SUPERFAMILY SSF53474 11 207 1.2E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0171 b868fd02e4b02af91be8826a983b5218 387 Gene3D G3DSA:3.40.50.1820 30 228 2.3E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_E029 1e26b9bde25f9cf3723eac4552dd9a00 403 SUPERFAMILY SSF46785 17 137 1.9E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_E029 1e26b9bde25f9cf3723eac4552dd9a00 403 Pfam PF01051 Initiator Replication protein 12 225 1.1E-58 T 14-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 MC28_E029 1e26b9bde25f9cf3723eac4552dd9a00 403 SUPERFAMILY SSF46785 130 229 4.83E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_E029 1e26b9bde25f9cf3723eac4552dd9a00 403 Gene3D G3DSA:1.10.10.10 144 236 1.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_E029 1e26b9bde25f9cf3723eac4552dd9a00 403 Gene3D G3DSA:1.10.10.10 2 143 2.1E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0228 586eb18bd06651025e9f4896759b1a8b 825 Pfam PF05547 Immune inhibitor A peptidase M6 178 821 6.0E-300 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 MC28_0228 586eb18bd06651025e9f4896759b1a8b 825 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 213 522 1.6E-89 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 MC28_0228 586eb18bd06651025e9f4896759b1a8b 825 SUPERFAMILY SSF55486 291 459 7.08E-17 T 14-10-2018 MC28_0228 586eb18bd06651025e9f4896759b1a8b 825 PIRSF PIRSF007519 32 825 0.0 T 14-10-2018 IPR012300 Peptidase M6, InhA MC28_3933 a57a764cc2694a77c00612e2611771e2 200 SUPERFAMILY SSF55174 2 200 1.96E-67 T 14-10-2018 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 5.3E-84 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 SMART SM01390 3 91 6.9E-47 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 Gene3D G3DSA:1.10.1050.10 177 200 1.9E-5 T 14-10-2018 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 Gene3D G3DSA:3.10.290.10 98 176 3.6E-31 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 35.854 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 1.3E-29 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 Gene3D G3DSA:1.10.1050.10 1 97 1.6E-36 T 14-10-2018 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 Pfam PF01479 S4 domain 93 139 7.4E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3933 a57a764cc2694a77c00612e2611771e2 200 SMART SM00363 92 156 8.6E-21 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3553 50395288676dc5a9ad82a785889a7484 370 SUPERFAMILY SSF53335 17 363 9.05E-82 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3553 50395288676dc5a9ad82a785889a7484 370 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 79 294 2.4E-43 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 MC28_3553 50395288676dc5a9ad82a785889a7484 370 Gene3D G3DSA:3.40.50.12710 6 368 1.5E-93 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 MC28_E097 313bbee2e2a8d418c1ec0e2fec6e3550 88 Gene3D G3DSA:1.10.10.60 50 88 3.0E-6 T 14-10-2018 MC28_E097 313bbee2e2a8d418c1ec0e2fec6e3550 88 SUPERFAMILY SSF46689 45 86 1.22E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_E097 313bbee2e2a8d418c1ec0e2fec6e3550 88 Pfam PF02796 Helix-turn-helix domain of resolvase 45 88 1.3E-14 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 MC28_E097 313bbee2e2a8d418c1ec0e2fec6e3550 88 Pfam PF00239 Resolvase, N terminal domain 2 42 1.3E-8 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_E097 313bbee2e2a8d418c1ec0e2fec6e3550 88 Gene3D G3DSA:3.40.50.1390 1 49 1.1E-7 T 14-10-2018 MC28_E097 313bbee2e2a8d418c1ec0e2fec6e3550 88 SUPERFAMILY SSF53041 2 43 3.79E-8 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_3107 81a678939674f169c2f25397ce80cbfa 306 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 37 56 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 MC28_3107 81a678939674f169c2f25397ce80cbfa 306 Gene3D G3DSA:3.20.20.70 1 300 4.6E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_3107 81a678939674f169c2f25397ce80cbfa 306 PIRSF PIRSF000164 1 300 2.2E-85 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 MC28_3107 81a678939674f169c2f25397ce80cbfa 306 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 1 298 41.852 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 MC28_3107 81a678939674f169c2f25397ce80cbfa 306 Pfam PF01180 Dihydroorotate dehydrogenase 1 283 5.3E-96 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 MC28_3107 81a678939674f169c2f25397ce80cbfa 306 SUPERFAMILY SSF51395 1 298 1.7E-87 T 14-10-2018 MC28_3107 81a678939674f169c2f25397ce80cbfa 306 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 236 256 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 MC28_3107 81a678939674f169c2f25397ce80cbfa 306 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 1 299 4.7E-127 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 MC28_0190 d0e48d1a2596992e760dd2dc3f39eab8 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 64 6.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0190 d0e48d1a2596992e760dd2dc3f39eab8 191 Gene3D G3DSA:1.10.357.10 9 181 1.4E-29 T 14-10-2018 MC28_0190 d0e48d1a2596992e760dd2dc3f39eab8 191 SUPERFAMILY SSF46689 10 76 1.26E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_4224 19914eeffefba6ce4735e042b08b60c5 254 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 226 1.3E-42 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA MC28_4224 19914eeffefba6ce4735e042b08b60c5 254 Gene3D G3DSA:3.40.50.1000 4 240 2.5E-89 T 14-10-2018 IPR023214 HAD superfamily MC28_4224 19914eeffefba6ce4735e042b08b60c5 254 Gene3D G3DSA:3.40.50.1000 82 177 2.5E-89 T 14-10-2018 IPR023214 HAD superfamily MC28_4224 19914eeffefba6ce4735e042b08b60c5 254 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 2.6E-27 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA MC28_4224 19914eeffefba6ce4735e042b08b60c5 254 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 2 250 5.0E-125 T 14-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 MC28_4224 19914eeffefba6ce4735e042b08b60c5 254 Pfam PF13242 HAD-hyrolase-like 177 249 1.1E-21 T 14-10-2018 MC28_4224 19914eeffefba6ce4735e042b08b60c5 254 PIRSF PIRSF000915 1 113 1.6E-26 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA MC28_4224 19914eeffefba6ce4735e042b08b60c5 254 PIRSF PIRSF000915 108 253 1.4E-34 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA MC28_4224 19914eeffefba6ce4735e042b08b60c5 254 SUPERFAMILY SSF56784 1 251 1.55E-76 T 14-10-2018 IPR036412 HAD-like superfamily MC28_4124 1ef33f53c2e42c635c4cbb07c7c55836 204 SUPERFAMILY SSF88659 121 186 9.91E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_4124 1ef33f53c2e42c635c4cbb07c7c55836 204 SUPERFAMILY SSF88946 12 117 3.92E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_4124 1ef33f53c2e42c635c4cbb07c7c55836 204 Gene3D G3DSA:1.10.10.10 127 189 5.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4124 1ef33f53c2e42c635c4cbb07c7c55836 204 Pfam PF04542 Sigma-70 region 2 41 93 6.1E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_4124 1ef33f53c2e42c635c4cbb07c7c55836 204 Pfam PF04545 Sigma-70, region 4 138 186 2.4E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_4124 1ef33f53c2e42c635c4cbb07c7c55836 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 187 2.3E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_4124 1ef33f53c2e42c635c4cbb07c7c55836 204 Gene3D G3DSA:1.10.1740.10 17 97 2.6E-14 T 14-10-2018 MC28_0121 b5318122f080c3226801855a78ff3393 395 Pfam PF07690 Major Facilitator Superfamily 2 215 1.1E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0121 b5318122f080c3226801855a78ff3393 395 Pfam PF07690 Major Facilitator Superfamily 242 377 9.5E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0121 b5318122f080c3226801855a78ff3393 395 SUPERFAMILY SSF103473 2 376 2.62E-46 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0121 b5318122f080c3226801855a78ff3393 395 Gene3D G3DSA:1.20.1250.20 1 380 6.0E-44 T 14-10-2018 MC28_2517 fe336654c1b2ebe393b3d1597cb2fb84 317 Gene3D G3DSA:3.90.180.10 8 312 4.1E-100 T 14-10-2018 MC28_2517 fe336654c1b2ebe393b3d1597cb2fb84 317 SUPERFAMILY SSF51735 117 244 9.54E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2517 fe336654c1b2ebe393b3d1597cb2fb84 317 Pfam PF13602 Zinc-binding dehydrogenase 187 313 1.9E-22 T 14-10-2018 MC28_2517 fe336654c1b2ebe393b3d1597cb2fb84 317 SMART SM00829 10 313 6.6E-27 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_2517 fe336654c1b2ebe393b3d1597cb2fb84 317 SUPERFAMILY SSF50129 1 150 1.17E-40 T 14-10-2018 IPR011032 GroES-like superfamily MC28_2517 fe336654c1b2ebe393b3d1597cb2fb84 317 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 6.1E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_2517 fe336654c1b2ebe393b3d1597cb2fb84 317 Gene3D G3DSA:3.40.50.720 128 262 4.1E-100 T 14-10-2018 MC28_1023 4f6a1ec0af6ff25241b048cbc964242f 234 SUPERFAMILY SSF88713 7 229 3.71E-51 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_1023 4f6a1ec0af6ff25241b048cbc964242f 234 Gene3D G3DSA:3.20.20.370 25 234 7.3E-54 T 14-10-2018 MC28_1023 4f6a1ec0af6ff25241b048cbc964242f 234 Pfam PF01522 Polysaccharide deacetylase 42 147 2.8E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_0008 52a66551889df51c6497c260f425cbd1 333 Gene3D G3DSA:3.40.190.10 117 219 1.7E-94 T 14-10-2018 MC28_0008 52a66551889df51c6497c260f425cbd1 333 Pfam PF09084 NMT1/THI5 like 44 259 1.3E-77 T 14-10-2018 IPR015168 SsuA/THI5-like MC28_0008 52a66551889df51c6497c260f425cbd1 333 SUPERFAMILY SSF53850 34 260 1.48E-38 T 14-10-2018 MC28_0008 52a66551889df51c6497c260f425cbd1 333 Gene3D G3DSA:3.40.190.10 37 312 1.7E-94 T 14-10-2018 MC28_G077 51a5b3ca386c7bf110fdc93552daae6d 358 Gene3D G3DSA:1.10.443.10 171 357 3.2E-36 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_G077 51a5b3ca386c7bf110fdc93552daae6d 358 Pfam PF00589 Phage integrase family 187 341 2.0E-23 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_G077 51a5b3ca386c7bf110fdc93552daae6d 358 Gene3D G3DSA:1.10.150.130 25 124 3.8E-16 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_G077 51a5b3ca386c7bf110fdc93552daae6d 358 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 28 117 4.7E-9 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_G077 51a5b3ca386c7bf110fdc93552daae6d 358 SUPERFAMILY SSF56349 192 348 6.77E-33 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_G077 51a5b3ca386c7bf110fdc93552daae6d 358 SUPERFAMILY SSF47823 26 119 7.65E-7 T 14-10-2018 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 195 426 9.2E-80 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 106 120 3.8E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 228 248 3.8E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 186 208 3.8E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 354 365 3.8E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 PIRSF PIRSF000185 7 428 8.2E-177 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 SUPERFAMILY SSF51735 195 427 1.69E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 114 127 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 Gene3D G3DSA:3.40.50.720 195 428 1.7E-87 T 14-10-2018 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 51 177 2.1E-54 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 SMART SM00839 197 426 1.2E-97 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 SUPERFAMILY SSF53223 18 197 4.8E-66 T 14-10-2018 MC28_0725 c8578bb412782b8dbba21c0711fbfd18 428 Gene3D G3DSA:3.40.50.10860 47 182 3.1E-63 T 14-10-2018 MC28_F107 e70837ebd7ac95f1b85a4002106f2648 369 SUPERFAMILY SSF56796 3 360 3.66E-90 T 14-10-2018 MC28_F107 e70837ebd7ac95f1b85a4002106f2648 369 Gene3D G3DSA:3.40.50.1970 3 159 3.3E-41 T 14-10-2018 MC28_F107 e70837ebd7ac95f1b85a4002106f2648 369 PIRSF PIRSF000112 1 361 5.1E-103 T 14-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 MC28_F107 e70837ebd7ac95f1b85a4002106f2648 369 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 2.4E-66 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 MC28_F107 e70837ebd7ac95f1b85a4002106f2648 369 Gene3D G3DSA:1.20.1090.10 160 369 3.8E-82 T 14-10-2018 MC28_2763 7cb02d68040432e1f1b25dc3e1e3366c 52 TIGRFAM TIGR02864 spore_sspO: small, acid-soluble spore protein O 4 52 8.2E-28 T 14-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 MC28_2763 7cb02d68040432e1f1b25dc3e1e3366c 52 ProDom PD050103 O SPORE SMALL ACID-SOLUBLE SASP SPORULATION CAPSID COAT K SEQUENCING 6 41 5.0E-13 T 14-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 MC28_2763 7cb02d68040432e1f1b25dc3e1e3366c 52 Pfam PF08175 Small acid-soluble spore protein O family 6 52 1.8E-23 T 14-10-2018 MC28_2763 7cb02d68040432e1f1b25dc3e1e3366c 52 Hamap MF_00665 Small, acid-soluble spore protein O [sspO]. 4 52 21.411 T 14-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 MC28_1902 2e6637786843705b8f37a337b9fb60ff 440 Gene3D G3DSA:3.50.50.60 4 410 1.9E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1902 2e6637786843705b8f37a337b9fb60ff 440 Pfam PF12831 FAD dependent oxidoreductase 6 406 1.2E-8 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal MC28_1902 2e6637786843705b8f37a337b9fb60ff 440 SUPERFAMILY SSF51905 4 352 1.33E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2497 ce50859b341fc91cad7ab504207e77bf 183 Hamap MF_01515 UPF0316 protein . 1 169 28.365 T 14-10-2018 IPR022930 Protein of unknown function UPF0316 MC28_2497 ce50859b341fc91cad7ab504207e77bf 183 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 109 161 6.4E-10 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_0304 b62a761cac3062698f7052d5f567d3cc 470 SUPERFAMILY SSF51905 1 454 3.02E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0304 b62a761cac3062698f7052d5f567d3cc 470 SUPERFAMILY SSF54373 296 404 1.96E-33 T 14-10-2018 MC28_0304 b62a761cac3062698f7052d5f567d3cc 470 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 1 457 3.4E-127 T 14-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 MC28_0304 b62a761cac3062698f7052d5f567d3cc 470 Pfam PF01593 Flavin containing amine oxidoreductase 7 454 3.4E-70 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 MC28_0304 b62a761cac3062698f7052d5f567d3cc 470 Gene3D G3DSA:1.10.3110.10 102 195 8.1E-144 T 14-10-2018 MC28_0304 b62a761cac3062698f7052d5f567d3cc 470 Gene3D G3DSA:3.90.660.20 36 403 8.1E-144 T 14-10-2018 MC28_0304 b62a761cac3062698f7052d5f567d3cc 470 Gene3D G3DSA:3.50.50.60 1 445 8.1E-144 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4733 61a6273b1b5f54f6d304011c7844b2a0 130 Pfam PF04545 Sigma-70, region 4 83 115 4.7E-7 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_4733 61a6273b1b5f54f6d304011c7844b2a0 130 Pfam PF12677 Domain of unknown function (DUF3797) 1 54 2.7E-25 T 14-10-2018 IPR024256 Domain of unknown function DUF3797 MC28_B63 e85a914dfbd0adaf4c7b023c78a9c49f 166 Pfam PF08281 Sigma-70, region 4 102 153 2.4E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_B63 e85a914dfbd0adaf4c7b023c78a9c49f 166 Gene3D G3DSA:1.10.10.10 85 160 4.7E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_B63 e85a914dfbd0adaf4c7b023c78a9c49f 166 SUPERFAMILY SSF88659 86 160 3.92E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_B63 e85a914dfbd0adaf4c7b023c78a9c49f 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 158 3.6E-12 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 Pfam PF00871 Acetokinase family 3 388 2.4E-172 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 Gene3D G3DSA:3.30.420.40 2 194 5.4E-77 T 14-10-2018 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 Gene3D G3DSA:3.30.420.40 195 395 1.1E-81 T 14-10-2018 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 PRINTS PR00471 Acetate kinase family signature 172 185 3.7E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 PRINTS PR00471 Acetate kinase family signature 202 223 3.7E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 PRINTS PR00471 Acetate kinase family signature 299 312 3.7E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 PRINTS PR00471 Acetate kinase family signature 321 337 3.7E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 PRINTS PR00471 Acetate kinase family signature 4 15 3.7E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 PRINTS PR00471 Acetate kinase family signature 375 387 3.7E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 197.746 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 PIRSF PIRSF000722 1 396 1.1E-154 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 393 2.7E-179 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 SUPERFAMILY SSF53067 156 393 1.02E-93 T 14-10-2018 MC28_3915 723f9ef2b23678aa6a2f0dad30a3a70e 397 SUPERFAMILY SSF53067 1 194 4.47E-74 T 14-10-2018 MC28_3639 26db89a20b95b4907869271ef62dcb24 277 Pfam PF13673 Acetyltransferase (GNAT) domain 43 123 3.4E-11 T 14-10-2018 IPR000182 GNAT domain MC28_3639 26db89a20b95b4907869271ef62dcb24 277 SUPERFAMILY SSF55729 1 256 7.85E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3639 26db89a20b95b4907869271ef62dcb24 277 Gene3D G3DSA:3.40.630.30 7 124 3.7E-16 T 14-10-2018 MC28_E076 ff574b3ed35e68be69105adb3ffaef6d 386 Gene3D G3DSA:1.10.150.130 55 191 1.1E-11 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_E076 ff574b3ed35e68be69105adb3ffaef6d 386 SUPERFAMILY SSF56349 116 369 6.18E-35 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_E076 ff574b3ed35e68be69105adb3ffaef6d 386 Gene3D G3DSA:1.10.443.10 192 374 8.5E-25 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_E076 ff574b3ed35e68be69105adb3ffaef6d 386 Pfam PF00589 Phage integrase family 194 368 1.3E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_C055 f69bc3139968f41209ed6c946aa301cc 77 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 12 77 25.718 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MC28_C055 f69bc3139968f41209ed6c946aa301cc 77 Gene3D G3DSA:2.30.30.100 10 77 6.9E-23 T 14-10-2018 MC28_C055 f69bc3139968f41209ed6c946aa301cc 77 Pfam PF17209 Hfq protein 19 75 6.5E-20 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MC28_C055 f69bc3139968f41209ed6c946aa301cc 77 SUPERFAMILY SSF50182 19 76 3.22E-18 T 14-10-2018 IPR010920 LSM domain superfamily MC28_C055 f69bc3139968f41209ed6c946aa301cc 77 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 18 75 5.4E-22 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MC28_4363 05bb7761fd20c194a9c85684f58ea8b8 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 76 2.0E-25 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MC28_4363 05bb7761fd20c194a9c85684f58ea8b8 77 Pfam PF03840 Preprotein translocase SecG subunit 4 75 3.9E-24 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MC28_4363 05bb7761fd20c194a9c85684f58ea8b8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 56 77 1.0E-11 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MC28_4363 05bb7761fd20c194a9c85684f58ea8b8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.0E-11 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MC28_4363 05bb7761fd20c194a9c85684f58ea8b8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.0E-11 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MC28_3592 f5362ada96e9ba20ce3a3493e682e71b 135 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 101 1.0E-16 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain MC28_3592 f5362ada96e9ba20ce3a3493e682e71b 135 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 96 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 MC28_3592 f5362ada96e9ba20ce3a3493e682e71b 135 SUPERFAMILY SSF53927 6 133 2.17E-49 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 MC28_3592 f5362ada96e9ba20ce3a3493e682e71b 135 Gene3D G3DSA:3.40.140.10 1 135 4.7E-63 T 14-10-2018 MC28_3592 f5362ada96e9ba20ce3a3493e682e71b 135 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 8 132 4.0E-48 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 MC28_G291 3702b4a7288e0b70cb17ddb1880efeaa 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 226 5.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G291 3702b4a7288e0b70cb17ddb1880efeaa 228 Gene3D G3DSA:1.10.10.10 137 228 7.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G291 3702b4a7288e0b70cb17ddb1880efeaa 228 SMART SM00448 11 121 4.7E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G291 3702b4a7288e0b70cb17ddb1880efeaa 228 Gene3D G3DSA:3.40.50.2300 3 136 1.2E-41 T 14-10-2018 MC28_G291 3702b4a7288e0b70cb17ddb1880efeaa 228 Pfam PF00072 Response regulator receiver domain 13 121 7.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G291 3702b4a7288e0b70cb17ddb1880efeaa 228 SMART SM00862 155 226 4.1E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G291 3702b4a7288e0b70cb17ddb1880efeaa 228 SUPERFAMILY SSF52172 8 187 6.97E-44 T 14-10-2018 IPR011006 CheY-like superfamily MC28_2764 cf7b67d7d567b6e70107dbd06925beb0 241 SUPERFAMILY SSF88713 37 238 7.08E-66 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_2764 cf7b67d7d567b6e70107dbd06925beb0 241 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 46 237 3.8E-73 T 14-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB MC28_2764 cf7b67d7d567b6e70107dbd06925beb0 241 Pfam PF01522 Polysaccharide deacetylase 46 166 1.4E-34 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_2764 cf7b67d7d567b6e70107dbd06925beb0 241 Gene3D G3DSA:3.20.20.370 34 241 1.6E-71 T 14-10-2018 MC28_G011 3272475302aeb92a523f35679661e4b9 644 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 1.2E-35 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 MC28_G011 3272475302aeb92a523f35679661e4b9 644 SUPERFAMILY SSF52467 185 370 1.54E-43 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_G011 3272475302aeb92a523f35679661e4b9 644 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 440 599 1.3E-40 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 MC28_G011 3272475302aeb92a523f35679661e4b9 644 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 476 495 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 MC28_G011 3272475302aeb92a523f35679661e4b9 644 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 195 9.3E-36 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 MC28_G011 3272475302aeb92a523f35679661e4b9 644 Hamap MF_01669 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [iolD]. 1 644 61.814 T 14-10-2018 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes GO:0000287|GO:0016787|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 MC28_G011 3272475302aeb92a523f35679661e4b9 644 Gene3D G3DSA:3.40.50.1220 212 403 4.0E-39 T 14-10-2018 MC28_G011 3272475302aeb92a523f35679661e4b9 644 Gene3D G3DSA:3.40.50.970 414 612 1.4E-45 T 14-10-2018 MC28_G011 3272475302aeb92a523f35679661e4b9 644 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 642 4.6E-298 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 MC28_G011 3272475302aeb92a523f35679661e4b9 644 SUPERFAMILY SSF52518 2 209 1.25E-34 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_G011 3272475302aeb92a523f35679661e4b9 644 Gene3D G3DSA:3.40.50.970 1 209 1.3E-33 T 14-10-2018 MC28_G011 3272475302aeb92a523f35679661e4b9 644 SUPERFAMILY SSF52518 417 632 8.48E-55 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 42.756 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 Gene3D G3DSA:3.30.260.10 137 408 6.6E-236 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 1.6E-103 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 Gene3D G3DSA:3.50.7.10 171 377 6.6E-236 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 Gene3D G3DSA:1.10.560.10 7 518 6.6E-236 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 SUPERFAMILY SSF52029 183 374 8.22E-86 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 1.2E-258 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 PRINTS PR00298 60kDa chaperonin signature 82 109 4.7E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 PRINTS PR00298 60kDa chaperonin signature 348 373 4.7E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 PRINTS PR00298 60kDa chaperonin signature 26 52 4.7E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 PRINTS PR00298 60kDa chaperonin signature 396 417 4.7E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 PRINTS PR00298 60kDa chaperonin signature 266 289 4.7E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 SUPERFAMILY SSF54849 136 204 1.03E-25 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily MC28_4955 bce899091ce77a437de4b1b4fc1eb6cb 544 SUPERFAMILY SSF48592 5 518 2.6E-80 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily MC28_0603 687b64242289bbd5fba3aa45182d38ba 304 Gene3D G3DSA:3.50.30.60 164 295 2.3E-43 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily MC28_0603 687b64242289bbd5fba3aa45182d38ba 304 SUPERFAMILY SSF52317 1 150 5.04E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0603 687b64242289bbd5fba3aa45182d38ba 304 SUPERFAMILY SSF141986 164 294 3.4E-43 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily MC28_0603 687b64242289bbd5fba3aa45182d38ba 304 Pfam PF02016 LD-carboxypeptidase 13 287 2.7E-80 T 14-10-2018 IPR003507 Peptidase family S66 MC28_0603 687b64242289bbd5fba3aa45182d38ba 304 Gene3D G3DSA:3.40.50.10740 1 152 5.2E-54 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal MC28_0603 687b64242289bbd5fba3aa45182d38ba 304 PIRSF PIRSF028757 1 300 3.5E-89 T 14-10-2018 IPR003507 Peptidase family S66 MC28_3411 f3284cae1d00c44d9eb013222c0eb0c5 242 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 172 1.1E-52 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 MC28_3411 f3284cae1d00c44d9eb013222c0eb0c5 242 PIRSF PIRSF006755 1 230 2.0E-64 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 MC28_3411 f3284cae1d00c44d9eb013222c0eb0c5 242 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 218 30.075 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 MC28_3411 f3284cae1d00c44d9eb013222c0eb0c5 242 SUPERFAMILY SSF52540 1 205 3.25E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3411 f3284cae1d00c44d9eb013222c0eb0c5 242 Pfam PF13500 AAA domain 4 204 3.2E-47 T 14-10-2018 MC28_3411 f3284cae1d00c44d9eb013222c0eb0c5 242 Gene3D G3DSA:3.40.50.300 2 221 1.3E-62 T 14-10-2018 MC28_2302 6cd2a806d33df8dc1d431ffa9b7bd239 197 SUPERFAMILY SSF54909 22 107 8.39E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_2302 6cd2a806d33df8dc1d431ffa9b7bd239 197 Gene3D G3DSA:3.30.70.100 20 116 6.5E-8 T 14-10-2018 MC28_2302 6cd2a806d33df8dc1d431ffa9b7bd239 197 Pfam PF03992 Antibiotic biosynthesis monooxygenase 22 91 3.8E-6 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain MC28_3620 89f7af89c0ccf3cb913bd9206f1914f0 275 PIRSF PIRSF000193 1 265 1.3E-65 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_3620 89f7af89c0ccf3cb913bd9206f1914f0 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 260 2.2E-16 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_3620 89f7af89c0ccf3cb913bd9206f1914f0 275 Gene3D G3DSA:3.40.50.720 1 160 6.1E-31 T 14-10-2018 MC28_3620 89f7af89c0ccf3cb913bd9206f1914f0 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 97 1.2E-15 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal MC28_3620 89f7af89c0ccf3cb913bd9206f1914f0 275 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_3620 89f7af89c0ccf3cb913bd9206f1914f0 275 SUPERFAMILY SSF51735 2 159 7.14E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3620 89f7af89c0ccf3cb913bd9206f1914f0 275 Gene3D G3DSA:1.10.3730.10 161 262 3.3E-16 T 14-10-2018 MC28_3620 89f7af89c0ccf3cb913bd9206f1914f0 275 SUPERFAMILY SSF48179 158 262 1.02E-19 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_2034 9dae0329b5ea36b7e2bedfdba32318ce 370 Gene3D G3DSA:1.20.1250.30 224 365 9.6E-63 T 14-10-2018 MC28_2034 9dae0329b5ea36b7e2bedfdba32318ce 370 Pfam PF01966 HD domain 50 129 2.2E-8 T 14-10-2018 IPR006674 HD domain MC28_2034 9dae0329b5ea36b7e2bedfdba32318ce 370 Gene3D G3DSA:1.10.3210.10 4 362 9.6E-63 T 14-10-2018 MC28_2034 9dae0329b5ea36b7e2bedfdba32318ce 370 SUPERFAMILY SSF109604 3 298 8.64E-62 T 14-10-2018 MC28_3469 f522b405f8f7b400575e330a908933fb 630 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_3469 f522b405f8f7b400575e330a908933fb 630 SUPERFAMILY SSF52518 317 502 1.47E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_3469 f522b405f8f7b400575e330a908933fb 630 Gene3D G3DSA:3.40.50.970 314 489 1.1E-66 T 14-10-2018 MC28_3469 f522b405f8f7b400575e330a908933fb 630 Gene3D G3DSA:3.40.50.920 493 627 2.2E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_3469 f522b405f8f7b400575e330a908933fb 630 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 624 44.941 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_3469 f522b405f8f7b400575e330a908933fb 630 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_3469 f522b405f8f7b400575e330a908933fb 630 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 623 1.0E-295 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_3469 f522b405f8f7b400575e330a908933fb 630 Pfam PF02779 Transketolase, pyrimidine binding domain 316 477 2.0E-39 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_3469 f522b405f8f7b400575e330a908933fb 630 SUPERFAMILY SSF52518 5 378 4.94E-74 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_3469 f522b405f8f7b400575e330a908933fb 630 Pfam PF02780 Transketolase, C-terminal domain 493 615 4.8E-30 T 14-10-2018 IPR033248 Transketolase, C-terminal domain MC28_3469 f522b405f8f7b400575e330a908933fb 630 SUPERFAMILY SSF52922 490 623 1.57E-32 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_3469 f522b405f8f7b400575e330a908933fb 630 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 3 278 6.4E-119 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 MC28_3469 f522b405f8f7b400575e330a908933fb 630 SMART SM00861 316 481 6.7E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_4108 7f704ce2e18e83ab4178e712e575e297 638 Pfam PF02687 FtsX-like permease family 82 166 2.0E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_4108 7f704ce2e18e83ab4178e712e575e297 638 PIRSF PIRSF018968 1 638 1.0E-123 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_0453 916cd8f0974964398ae97c8908b73975 303 SUPERFAMILY SSF103481 38 140 7.19E-15 T 14-10-2018 MC28_0453 916cd8f0974964398ae97c8908b73975 303 Pfam PF00892 EamA-like transporter family 13 136 2.6E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0453 916cd8f0974964398ae97c8908b73975 303 Pfam PF00892 EamA-like transporter family 149 282 1.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0453 916cd8f0974964398ae97c8908b73975 303 SUPERFAMILY SSF103481 185 286 1.96E-12 T 14-10-2018 MC28_0660 1c58696484a0d569cd233cf2eaa83619 203 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 195 38.67 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 MC28_0660 1c58696484a0d569cd233cf2eaa83619 203 Pfam PF01583 Adenylylsulphate kinase 25 177 1.4E-73 T 14-10-2018 MC28_0660 1c58696484a0d569cd233cf2eaa83619 203 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 191 3.3E-86 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 MC28_0660 1c58696484a0d569cd233cf2eaa83619 203 SUPERFAMILY SSF52540 25 194 3.16E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0660 1c58696484a0d569cd233cf2eaa83619 203 Gene3D G3DSA:3.40.50.300 1 199 1.2E-83 T 14-10-2018 MC28_0908 fb6bf83f739ccf2e8f28fdb94c3ff6f9 328 PRINTS PR00955 Flagellar motor switch protein FliM signature 119 138 8.8E-5 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MC28_0908 fb6bf83f739ccf2e8f28fdb94c3ff6f9 328 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 8.8E-5 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MC28_0908 fb6bf83f739ccf2e8f28fdb94c3ff6f9 328 PRINTS PR00955 Flagellar motor switch protein FliM signature 216 234 8.8E-5 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MC28_0908 fb6bf83f739ccf2e8f28fdb94c3ff6f9 328 SUPERFAMILY SSF101801 259 325 6.93E-8 T 14-10-2018 IPR036429 SpoA-like superfamily MC28_0908 fb6bf83f739ccf2e8f28fdb94c3ff6f9 328 Pfam PF02154 Flagellar motor switch protein FliM 40 234 1.9E-23 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MC28_0908 fb6bf83f739ccf2e8f28fdb94c3ff6f9 328 PIRSF PIRSF002888 2 328 2.5E-57 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MC28_0908 fb6bf83f739ccf2e8f28fdb94c3ff6f9 328 Gene3D G3DSA:3.40.1550.10 46 236 8.5E-36 T 14-10-2018 IPR028976 CheC-like superfamily MC28_0908 fb6bf83f739ccf2e8f28fdb94c3ff6f9 328 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 258 325 1.8E-12 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) MC28_0908 fb6bf83f739ccf2e8f28fdb94c3ff6f9 328 SUPERFAMILY SSF103039 47 234 2.17E-5 T 14-10-2018 IPR028976 CheC-like superfamily MC28_0987 830340c036adcfa266d4179e5540cd90 420 Gene3D G3DSA:3.30.870.10 248 398 3.1E-29 T 14-10-2018 MC28_0987 830340c036adcfa266d4179e5540cd90 420 Pfam PF13091 PLD-like domain 260 386 2.0E-26 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_0987 830340c036adcfa266d4179e5540cd90 420 Pfam PF13091 PLD-like domain 81 223 2.9E-10 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_0987 830340c036adcfa266d4179e5540cd90 420 SMART SM00155 333 360 3.3E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_0987 830340c036adcfa266d4179e5540cd90 420 SMART SM00155 163 190 3.3 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_0987 830340c036adcfa266d4179e5540cd90 420 SUPERFAMILY SSF56024 38 232 4.32E-38 T 14-10-2018 MC28_0987 830340c036adcfa266d4179e5540cd90 420 SUPERFAMILY SSF56024 215 406 1.31E-35 T 14-10-2018 MC28_0987 830340c036adcfa266d4179e5540cd90 420 Gene3D G3DSA:3.30.870.10 57 247 1.3E-37 T 14-10-2018 MC28_3081 27b590500fc863f27e79ec28caedbc1d 62 Gene3D G3DSA:2.30.170.40 19 62 6.8E-18 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3081 27b590500fc863f27e79ec28caedbc1d 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 19.58 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3081 27b590500fc863f27e79ec28caedbc1d 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 6.8E-23 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3081 27b590500fc863f27e79ec28caedbc1d 62 Pfam PF00830 Ribosomal L28 family 3 58 2.0E-20 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3081 27b590500fc863f27e79ec28caedbc1d 62 SUPERFAMILY SSF143800 1 60 3.73E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4533 cc44675b97b2dc5790b39f02472d10d1 333 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 216 229 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4533 cc44675b97b2dc5790b39f02472d10d1 333 Pfam PF00146 NADH dehydrogenase 23 326 2.0E-124 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4533 cc44675b97b2dc5790b39f02472d10d1 333 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 15 332 25.055 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4305 fb361b9466c6737937df4d0544a03d90 556 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 378 394 5.8E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_4305 fb361b9466c6737937df4d0544a03d90 556 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 399 410 5.8E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_4305 fb361b9466c6737937df4d0544a03d90 556 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 342 362 5.8E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_4305 fb361b9466c6737937df4d0544a03d90 556 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 470 486 5.8E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 MC28_4305 fb361b9466c6737937df4d0544a03d90 556 Gene3D G3DSA:3.10.170.10 232 391 9.4E-51 T 14-10-2018 MC28_4305 fb361b9466c6737937df4d0544a03d90 556 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 233 387 1.0E-44 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 MC28_4305 fb361b9466c6737937df4d0544a03d90 556 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 390 555 9.7E-60 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 MC28_4305 fb361b9466c6737937df4d0544a03d90 556 Gene3D G3DSA:1.10.390.10 392 555 7.0E-62 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily MC28_4305 fb361b9466c6737937df4d0544a03d90 556 SUPERFAMILY SSF55486 232 556 6.59E-89 T 14-10-2018 MC28_4305 fb361b9466c6737937df4d0544a03d90 556 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 89 139 1.6E-13 T 14-10-2018 IPR011096 FTP domain MC28_4305 fb361b9466c6737937df4d0544a03d90 556 Pfam PF03413 Peptidase propeptide and YPEB domain 154 226 9.8E-12 T 14-10-2018 IPR025711 PepSY domain MC28_2154 80e5dc2be86961cb9581ef806dc0edc4 161 Pfam PF13302 Acetyltransferase (GNAT) domain 5 142 6.2E-21 T 14-10-2018 IPR000182 GNAT domain MC28_2154 80e5dc2be86961cb9581ef806dc0edc4 161 SUPERFAMILY SSF55729 9 146 3.67E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2154 80e5dc2be86961cb9581ef806dc0edc4 161 Gene3D G3DSA:3.40.630.30 2 150 3.0E-24 T 14-10-2018 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 5 612 1.1E-203 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 1.9E-59 T 14-10-2018 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 1.9E-59 T 14-10-2018 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 1.9E-59 T 14-10-2018 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 412 431 1.9E-59 T 14-10-2018 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 1.9E-59 T 14-10-2018 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.9E-59 T 14-10-2018 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 1.9E-59 T 14-10-2018 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 Pfam PF00361 Proton-conducting membrane transporter 130 419 3.6E-91 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 117 5.6E-19 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 5.3E-15 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 411 433 5.3E-15 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 353 375 5.3E-15 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 MC28_4529 fd875acb67e513bc04eeaf9f3670175c 620 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 34 53 5.3E-15 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Gene3D G3DSA:1.10.268.10 371 460 2.2E-219 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 473 2.0E-161 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 661 706 2.0E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 657 1.4E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 711 757 4.7E-15 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 509 552 7.5E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 761 805 1.8E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 556 597 8.7E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Gene3D G3DSA:3.30.1360.40 238 334 2.2E-219 T 14-10-2018 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 809 25.217 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 SUPERFAMILY SSF101904 501 821 3.66E-116 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal MC28_4726 659189d63246533f2700d408ee6ff6f0 823 SUPERFAMILY SSF56719 32 488 1.26E-183 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 SMART SM00434 13 466 9.8E-295 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 808 0.0 T 14-10-2018 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Gene3D G3DSA:3.90.199.10 34 487 2.2E-219 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 MC28_4726 659189d63246533f2700d408ee6ff6f0 823 Gene3D G3DSA:2.120.10.90 498 808 1.7E-133 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal MC28_C081 daa6648362b529a20eb78fec3dbee276 107 SUPERFAMILY SSF46689 3 99 9.32E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3371 15c775e92a3fd0eddea8d3661d1fd593 353 Pfam PF12730 ABC-2 family transporter protein 11 174 2.9E-8 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 MC28_G003 a8495bab71d610b867635fde86c77112 864 Pfam PF07728 AAA domain (dynein-related subfamily) 630 729 1.2E-11 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 MC28_G003 a8495bab71d610b867635fde86c77112 864 Gene3D G3DSA:3.40.50.300 384 521 1.2E-5 T 14-10-2018 MC28_G003 a8495bab71d610b867635fde86c77112 864 SUPERFAMILY SSF52540 138 682 3.86E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G003 a8495bab71d610b867635fde86c77112 864 Gene3D G3DSA:3.40.50.300 536 742 2.4E-12 T 14-10-2018 MC28_G003 a8495bab71d610b867635fde86c77112 864 SMART SM00382 402 739 6.8E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_G003 a8495bab71d610b867635fde86c77112 864 SUPERFAMILY SSF52540 398 659 1.2E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G089 19ac459300c64ce9a4488a02e0ce70c1 573 SUPERFAMILY SSF90123 5 283 1.1E-21 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_G089 19ac459300c64ce9a4488a02e0ce70c1 573 Gene3D G3DSA:1.20.1560.10 1 294 4.6E-12 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_G089 19ac459300c64ce9a4488a02e0ce70c1 573 Pfam PF00005 ABC transporter 334 488 9.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_G089 19ac459300c64ce9a4488a02e0ce70c1 573 SMART SM00382 343 534 7.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_G089 19ac459300c64ce9a4488a02e0ce70c1 573 Gene3D G3DSA:3.40.50.300 295 570 7.1E-77 T 14-10-2018 MC28_G089 19ac459300c64ce9a4488a02e0ce70c1 573 SUPERFAMILY SSF52540 315 558 7.25E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G089 19ac459300c64ce9a4488a02e0ce70c1 573 ProSitePatterns PS00211 ABC transporters family signature. 460 474 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4763 43f72bd1601753ad92a882759ec00569 115 Gene3D G3DSA:3.30.1120.40 16 115 7.4E-40 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 MC28_4763 43f72bd1601753ad92a882759ec00569 115 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 19 113 28.389 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 MC28_4763 43f72bd1601753ad92a882759ec00569 115 Pfam PF04026 SpoVG 19 99 5.9E-36 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 MC28_4763 43f72bd1601753ad92a882759ec00569 115 SUPERFAMILY SSF160537 19 104 2.22E-33 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 MC28_B55 31201dcd012613a41201c4badc14b28f 193 SUPERFAMILY SSF101386 21 193 1.48E-31 T 14-10-2018 MC28_B55 31201dcd012613a41201c4badc14b28f 193 Gene3D G3DSA:1.10.4010.10 16 193 2.1E-8 T 14-10-2018 MC28_B55 31201dcd012613a41201c4badc14b28f 193 PIRSF PIRSF030140 19 193 2.6E-33 T 14-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 MC28_B55 31201dcd012613a41201c4badc14b28f 193 Pfam PF08761 dUTPase 20 193 1.8E-28 T 14-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 MC28_0535 0dee4f99df0ebc62f26e01b6d27a9687 249 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 99 2.0E-25 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal MC28_0535 0dee4f99df0ebc62f26e01b6d27a9687 249 Pfam PF01478 Type IV leader peptidase family 112 213 1.4E-12 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 MC28_2332 5022ece809d16f576184e78a15ac540c 169 Pfam PF12867 DinB superfamily 33 161 1.2E-17 T 14-10-2018 IPR024775 DinB-like domain MC28_2332 5022ece809d16f576184e78a15ac540c 169 Gene3D G3DSA:1.20.120.450 23 168 3.9E-31 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2332 5022ece809d16f576184e78a15ac540c 169 SUPERFAMILY SSF109854 16 164 1.83E-35 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2689 be0fa483c01f599dec5599ee37379148 296 SUPERFAMILY SSF110296 4 123 2.35E-15 T 14-10-2018 MC28_2689 be0fa483c01f599dec5599ee37379148 296 SUPERFAMILY SSF69322 52 285 1.83E-7 T 14-10-2018 MC28_2689 be0fa483c01f599dec5599ee37379148 296 Gene3D G3DSA:2.130.10.10 4 150 2.2E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_3140 daa40f607302cf914d2016f7bf42d1d7 310 Gene3D G3DSA:3.40.50.150 4 308 1.2E-106 T 14-10-2018 MC28_3140 daa40f607302cf914d2016f7bf42d1d7 310 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 6.8E-130 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 MC28_3140 daa40f607302cf914d2016f7bf42d1d7 310 SUPERFAMILY SSF81799 113 214 4.45E-36 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 MC28_3140 daa40f607302cf914d2016f7bf42d1d7 310 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 39.329 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 MC28_3140 daa40f607302cf914d2016f7bf42d1d7 310 SUPERFAMILY SSF53335 4 309 6.48E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3140 daa40f607302cf914d2016f7bf42d1d7 310 PIRSF PIRSF004486 1 310 1.4E-110 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 MC28_3140 daa40f607302cf914d2016f7bf42d1d7 310 Gene3D G3DSA:1.10.150.170 111 215 1.2E-106 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 MC28_3140 daa40f607302cf914d2016f7bf42d1d7 310 Pfam PF01795 MraW methylase family 2 310 4.1E-134 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 468 1.2E-135 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 164 4.2E-49 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 Gene3D G3DSA:1.20.5.320 437 469 4.7E-21 T 14-10-2018 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 SMART SM01350 178 469 2.1E-224 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 PIRSF PIRSF000109 1 469 1.4E-236 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 Gene3D G3DSA:1.10.1040.10 180 436 3.9E-110 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 358 380 6.3E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 6.3E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 6.3E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 6.3E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 6.3E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 6.3E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 SUPERFAMILY SSF51735 4 176 6.41E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_G254 b55c2ee451d9c06481a5507807672a42 469 SUPERFAMILY SSF48179 176 468 3.91E-130 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 Gene3D G3DSA:3.40.50.720 1 179 2.8E-56 T 14-10-2018 MC28_G254 b55c2ee451d9c06481a5507807672a42 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 8.2E-224 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_4791 102a1d61c6e09308f2075b549ebb19cc 153 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 150 5.7E-58 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 MC28_4791 102a1d61c6e09308f2075b549ebb19cc 153 Gene3D G3DSA:1.10.10.1240 2 72 2.7E-35 T 14-10-2018 MC28_4791 102a1d61c6e09308f2075b549ebb19cc 153 PIRSF PIRSF010607 1 153 7.3E-67 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 MC28_4791 102a1d61c6e09308f2075b549ebb19cc 153 Gene3D G3DSA:1.10.1200.150 73 153 3.5E-31 T 14-10-2018 MC28_2731 045836a5a674fde845607244ef0eb339 74 SUPERFAMILY SSF54593 18 74 1.57E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2731 045836a5a674fde845607244ef0eb339 74 Gene3D G3DSA:3.10.180.10 1 74 2.3E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_4394 25c2c0c21f2262bb975d4fe9637414b6 151 Gene3D G3DSA:2.160.10.10 28 150 5.4E-28 T 14-10-2018 MC28_4394 25c2c0c21f2262bb975d4fe9637414b6 151 SUPERFAMILY SSF51161 7 141 3.88E-32 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_4394 25c2c0c21f2262bb975d4fe9637414b6 151 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 90 122 1.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 Gene3D G3DSA:2.170.150.20 177 319 2.6E-58 T 14-10-2018 MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 Gene3D G3DSA:3.30.1060.10 1 166 9.8E-62 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 Pfam PF01641 SelR domain 183 301 4.1E-48 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 8 159 3.5E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 SUPERFAMILY SSF55068 3 171 1.22E-68 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 SUPERFAMILY SSF51316 178 317 1.88E-59 T 14-10-2018 IPR011057 Mss4-like superfamily MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 7 166 34.615 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 179 310 2.0E-64 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 Pfam PF01625 Peptide methionine sulfoxide reductase 10 159 3.7E-58 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_4670 e57c9f50867c8e55ea0fe01109964442 321 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 172 302 37.872 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 MC28_2847 3164637750fdb86426a97d84d12e8b07 231 Gene3D G3DSA:1.10.150.520 17 89 3.3E-38 T 14-10-2018 MC28_2847 3164637750fdb86426a97d84d12e8b07 231 Gene3D G3DSA:3.40.50.1000 5 218 3.3E-38 T 14-10-2018 IPR023214 HAD superfamily MC28_2847 3164637750fdb86426a97d84d12e8b07 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 187 1.9E-22 T 14-10-2018 MC28_2847 3164637750fdb86426a97d84d12e8b07 231 SUPERFAMILY SSF56784 3 221 3.8E-29 T 14-10-2018 IPR036412 HAD-like superfamily MC28_4929 44528525b5322d0abbcfabcf302b7901 385 SUPERFAMILY SSF54593 25 372 2.61E-91 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_4929 44528525b5322d0abbcfabcf302b7901 385 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 34 385 2.4E-146 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 MC28_4929 44528525b5322d0abbcfabcf302b7901 385 Gene3D G3DSA:3.10.180.10 16 185 1.9E-54 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_4929 44528525b5322d0abbcfabcf302b7901 385 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 192 339 1.0E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_4929 44528525b5322d0abbcfabcf302b7901 385 Gene3D G3DSA:3.10.180.10 188 385 2.1E-83 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_4929 44528525b5322d0abbcfabcf302b7901 385 PIRSF PIRSF009283 20 385 3.5E-141 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 MC28_F053 339908243737763986720b0ee11dbaf3 411 Pfam PF12724 Flavodoxin domain 253 344 5.4E-7 T 14-10-2018 IPR026816 Flavodoxin domain MC28_F053 339908243737763986720b0ee11dbaf3 411 SUPERFAMILY SSF56281 10 285 2.62E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_F053 339908243737763986720b0ee11dbaf3 411 Gene3D G3DSA:3.60.15.10 1 243 1.7E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_F053 339908243737763986720b0ee11dbaf3 411 Pfam PF00753 Metallo-beta-lactamase superfamily 36 168 3.5E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_F053 339908243737763986720b0ee11dbaf3 411 PIRSF PIRSF005243 1 407 6.1E-124 T 14-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 MC28_F053 339908243737763986720b0ee11dbaf3 411 SUPERFAMILY SSF52218 248 367 3.88E-28 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_F053 339908243737763986720b0ee11dbaf3 411 SMART SM00849 34 223 1.8E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_F053 339908243737763986720b0ee11dbaf3 411 Gene3D G3DSA:3.40.50.360 250 405 1.1E-30 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_3520 25bbef81989a5f65e1cc2f113cc8d81a 560 SUPERFAMILY SSF52540 15 241 2.09E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3520 25bbef81989a5f65e1cc2f113cc8d81a 560 SMART SM00487 56 235 8.5E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_3520 25bbef81989a5f65e1cc2f113cc8d81a 560 Pfam PF00271 Helicase conserved C-terminal domain 360 466 1.1E-20 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_3520 25bbef81989a5f65e1cc2f113cc8d81a 560 Gene3D G3DSA:3.40.50.10810 62 261 8.5E-42 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily MC28_3520 25bbef81989a5f65e1cc2f113cc8d81a 560 Gene3D G3DSA:3.40.50.300 270 552 1.2E-52 T 14-10-2018 MC28_3520 25bbef81989a5f65e1cc2f113cc8d81a 560 SMART SM00490 386 466 1.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_3520 25bbef81989a5f65e1cc2f113cc8d81a 560 Pfam PF00176 SNF2 family N-terminal domain 79 333 2.0E-36 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 MC28_3520 25bbef81989a5f65e1cc2f113cc8d81a 560 SUPERFAMILY SSF52540 168 518 2.0E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1274 0a993cbde321ed5886360215da6770e0 450 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 19 425 1.5E-142 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_1274 0a993cbde321ed5886360215da6770e0 450 Pfam PF05525 Branched-chain amino acid transport protein 14 438 1.1E-152 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_5366 8052bcbc68124a16a9455a62c60fd853 487 Pfam PF01235 Sodium:alanine symporter family 51 461 5.9E-158 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_5366 8052bcbc68124a16a9455a62c60fd853 487 PRINTS PR00175 Sodium/alanine symporter signature 296 314 8.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_5366 8052bcbc68124a16a9455a62c60fd853 487 PRINTS PR00175 Sodium/alanine symporter signature 87 109 8.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_5366 8052bcbc68124a16a9455a62c60fd853 487 PRINTS PR00175 Sodium/alanine symporter signature 205 224 8.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_5366 8052bcbc68124a16a9455a62c60fd853 487 PRINTS PR00175 Sodium/alanine symporter signature 355 377 8.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_5366 8052bcbc68124a16a9455a62c60fd853 487 PRINTS PR00175 Sodium/alanine symporter signature 418 438 8.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_5366 8052bcbc68124a16a9455a62c60fd853 487 PRINTS PR00175 Sodium/alanine symporter signature 177 195 8.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_5366 8052bcbc68124a16a9455a62c60fd853 487 TIGRFAM TIGR00835 agcS: amino acid carrier protein 14 449 2.6E-145 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 Gene3D G3DSA:3.30.870.10 38 217 4.9E-43 T 14-10-2018 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 Gene3D G3DSA:3.30.870.10 218 393 8.1E-31 T 14-10-2018 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 SUPERFAMILY SSF56024 222 380 8.97E-41 T 14-10-2018 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 23 393 1.2E-100 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 Pfam PF13091 PLD-like domain 238 364 5.6E-30 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 Pfam PF13091 PLD-like domain 57 198 1.1E-16 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 SUPERFAMILY SSF56024 16 228 5.83E-49 T 14-10-2018 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 SMART SM00155 310 337 6.4E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 SMART SM00155 138 165 1.7E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 PIRSF PIRSF000850 307 367 37.0 T 14-10-2018 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 PIRSF PIRSF000850 26 206 0.21 T 14-10-2018 MC28_4582 5f82f62e1e618361c00ff71d16d135a8 397 PIRSF PIRSF000850 227 308 1.7E-5 T 14-10-2018 MC28_0450 fa42d320707d5b37a1e520aabc2122ca 140 Gene3D G3DSA:3.40.630.30 2 139 2.7E-42 T 14-10-2018 MC28_0450 fa42d320707d5b37a1e520aabc2122ca 140 SUPERFAMILY SSF55729 4 140 3.95E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_0450 fa42d320707d5b37a1e520aabc2122ca 140 Pfam PF13673 Acetyltransferase (GNAT) domain 21 140 2.7E-20 T 14-10-2018 IPR000182 GNAT domain MC28_4887 28b60048aadf1595c40425c116f3e531 305 Gene3D G3DSA:1.10.3720.10 83 298 2.4E-17 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4887 28b60048aadf1595c40425c116f3e531 305 SUPERFAMILY SSF161098 88 285 1.96E-16 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4887 28b60048aadf1595c40425c116f3e531 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 302 1.4E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_D084 5c22f30b98afa0eb79af70a6db11d807 197 ProDom PD306514 PLASMID PXO2-33/BXB0032/GBAA_PXO2_0032 21 187 3.0E-85 T 14-10-2018 IPR020402 Uncharacterised protein family, plasmid pXO2-33 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 Gene3D G3DSA:1.10.287.130 247 306 6.0E-17 T 14-10-2018 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 Pfam PF00672 HAMP domain 190 237 2.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 SMART SM00387 353 459 3.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 SUPERFAMILY SSF55874 299 459 1.7E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 SMART SM00304 189 241 1.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 Gene3D G3DSA:1.20.1480.50 152 246 4.4E-10 T 14-10-2018 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 308 5.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 SMART SM00388 242 309 4.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 2.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 2.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 2.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 SUPERFAMILY SSF47384 225 310 3.14E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 459 7.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 Gene3D G3DSA:3.30.565.10 307 459 5.8E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1179 265fb47486d1e1b81f367c8c5a0355f1 459 SUPERFAMILY SSF158472 191 238 4.58E-7 T 14-10-2018 MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 Pfam PF00989 PAS fold 342 450 1.7E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 621 8.4E-54 T 14-10-2018 IPR000160 GGDEF domain MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 Gene3D G3DSA:3.30.70.270 458 638 5.8E-66 T 14-10-2018 MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 338 458 2.4E-11 T 14-10-2018 IPR000014 PAS domain MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 Pfam PF00563 EAL domain 642 876 6.4E-74 T 14-10-2018 IPR001633 EAL domain MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 461 623 3.5E-48 T 14-10-2018 IPR000160 GGDEF domain MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 SMART SM00091 341 407 0.0043 T 14-10-2018 IPR000014 PAS domain MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 SMART SM00267 453 625 1.2E-73 T 14-10-2018 IPR000160 GGDEF domain MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 Gene3D G3DSA:3.30.450.20 328 451 9.6E-17 T 14-10-2018 MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 SMART SM00052 635 881 1.8E-116 T 14-10-2018 IPR001633 EAL domain MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 SUPERFAMILY SSF55785 334 451 1.92E-15 T 14-10-2018 IPR035965 PAS domain superfamily MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 Pfam PF13321 Domain of unknown function (DUF4084) 1 304 1.2E-197 T 14-10-2018 IPR025152 Domain of unknown function DUF4084 MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 Gene3D G3DSA:3.20.20.450 639 890 4.6E-97 T 14-10-2018 IPR035919 EAL domain superfamily MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 SUPERFAMILY SSF55073 469 627 1.65E-54 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_4584 fe43012dd1e3e889ca1b02f454a02549 892 SUPERFAMILY SSF141868 640 888 5.1E-87 T 14-10-2018 IPR035919 EAL domain superfamily MC28_0142 00f7d9773611590bc955375606b487a2 205 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 4 203 4.1E-62 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 MC28_0142 00f7d9773611590bc955375606b487a2 205 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 6 199 3.6E-63 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 MC28_0142 00f7d9773611590bc955375606b487a2 205 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 5 203 33.901 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 MC28_0142 00f7d9773611590bc955375606b487a2 205 SUPERFAMILY SSF50486 3 204 3.92E-66 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 MC28_0142 00f7d9773611590bc955375606b487a2 205 Gene3D G3DSA:3.10.300.10 1 205 3.7E-72 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 MC28_1224 572a16f9522f38cca522734fe9cbc8cb 316 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 53 64 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site MC28_1224 572a16f9522f38cca522734fe9cbc8cb 316 SUPERFAMILY SSF52743 30 314 1.09E-85 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_1224 572a16f9522f38cca522734fe9cbc8cb 316 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 94 104 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site MC28_1224 572a16f9522f38cca522734fe9cbc8cb 316 Gene3D G3DSA:3.40.50.200 10 315 5.0E-114 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_1224 572a16f9522f38cca522734fe9cbc8cb 316 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 256 266 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_1224 572a16f9522f38cca522734fe9cbc8cb 316 PRINTS PR00723 Subtilisin serine protease family (S8) signature 90 103 2.8E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_1224 572a16f9522f38cca522734fe9cbc8cb 316 PRINTS PR00723 Subtilisin serine protease family (S8) signature 255 271 2.8E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_1224 572a16f9522f38cca522734fe9cbc8cb 316 PRINTS PR00723 Subtilisin serine protease family (S8) signature 48 67 2.8E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_1224 572a16f9522f38cca522734fe9cbc8cb 316 Pfam PF00082 Subtilase family 48 299 1.0E-56 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_F002 5889a906cf178f08221949b8305367e7 369 Gene3D G3DSA:2.80.10.50 7 145 1.1E-32 T 14-10-2018 MC28_F002 5889a906cf178f08221949b8305367e7 369 Pfam PF05431 Insecticidal Crystal Toxin, P42 186 348 3.4E-16 T 14-10-2018 IPR008872 Insecticidal crystal toxin GO:0009405 MC28_F002 5889a906cf178f08221949b8305367e7 369 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 93 155 2.8E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_F002 5889a906cf178f08221949b8305367e7 369 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 8 84 8.3E-17 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_F002 5889a906cf178f08221949b8305367e7 369 SUPERFAMILY SSF50370 8 135 4.85E-32 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_2262 90e901e4fe63313cf04584ef7d85b5d3 244 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 8 241 61.206 T 14-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 MC28_2262 90e901e4fe63313cf04584ef7d85b5d3 244 Gene3D G3DSA:3.30.1600.10 33 167 7.0E-71 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily MC28_2262 90e901e4fe63313cf04584ef7d85b5d3 244 Gene3D G3DSA:3.40.50.1220 15 238 7.0E-71 T 14-10-2018 MC28_2262 90e901e4fe63313cf04584ef7d85b5d3 244 SUPERFAMILY SSF52467 5 241 2.76E-75 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_2262 90e901e4fe63313cf04584ef7d85b5d3 244 Pfam PF02146 Sir2 family 24 195 5.1E-50 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 MC28_3856 c99a6241d4e81db459190d9e11307388 293 PIRSF PIRSF012563 12 285 7.7E-110 T 14-10-2018 IPR014199 Sporulation protein YtxC MC28_3856 c99a6241d4e81db459190d9e11307388 293 TIGRFAM TIGR02834 spo_ytxC: putative sporulation protein YtxC 2 268 2.8E-84 T 14-10-2018 IPR014199 Sporulation protein YtxC MC28_3856 c99a6241d4e81db459190d9e11307388 293 Pfam PF08812 YtxC-like family 55 267 1.6E-53 T 14-10-2018 IPR014199 Sporulation protein YtxC MC28_4408 e150af7788f54f3bb89d9ad2c81f06d6 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 52 1.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_4408 e150af7788f54f3bb89d9ad2c81f06d6 288 Gene3D G3DSA:3.40.190.290 82 287 1.9E-43 T 14-10-2018 MC28_4408 e150af7788f54f3bb89d9ad2c81f06d6 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 9 20 5.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_4408 e150af7788f54f3bb89d9ad2c81f06d6 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 5.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_4408 e150af7788f54f3bb89d9ad2c81f06d6 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 30 5.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_4408 e150af7788f54f3bb89d9ad2c81f06d6 288 Pfam PF03466 LysR substrate binding domain 80 280 7.1E-44 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_4408 e150af7788f54f3bb89d9ad2c81f06d6 288 Gene3D G3DSA:1.10.10.10 1 81 1.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4408 e150af7788f54f3bb89d9ad2c81f06d6 288 SUPERFAMILY SSF46785 2 102 4.65E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4408 e150af7788f54f3bb89d9ad2c81f06d6 288 SUPERFAMILY SSF53850 81 285 7.67E-45 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 SUPERFAMILY SSF51905 2 319 1.08E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 SMART SM00450 457 550 4.1E-15 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 Gene3D G3DSA:3.40.250.10 453 554 5.8E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 SUPERFAMILY SSF55424 326 448 5.33E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.3E-21 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.3E-21 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.3E-21 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.3E-21 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.3E-21 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 333 434 8.5E-16 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 Gene3D G3DSA:3.50.50.60 116 439 1.8E-181 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 307 2.5E-56 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 Pfam PF00581 Rhodanese-like domain 465 544 3.1E-11 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 2.3E-14 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 2.3E-14 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.3E-14 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 2.3E-14 T 14-10-2018 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 TIGRFAM TIGR03385 CoA_CoA_reduc: CoA-disulfide reductase 4 443 7.8E-194 T 14-10-2018 IPR017758 Coenzyme A disulphide reductase GO:0003756|GO:0050451|GO:0050660|GO:0050661|GO:0055114 MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 Gene3D G3DSA:3.50.50.60 4 324 1.8E-181 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0048 fa95d1fc3564ae63e981abbdcbeeaa47 554 SUPERFAMILY SSF52821 437 544 1.15E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_3701 ed6d8aad1daad6e4b5d707e336ef507c 773 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 29 562 1.3E-182 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 MC28_3701 ed6d8aad1daad6e4b5d707e336ef507c 773 Gene3D G3DSA:3.10.310.30 320 444 1.9E-35 T 14-10-2018 MC28_3701 ed6d8aad1daad6e4b5d707e336ef507c 773 Pfam PF01368 DHH family 83 209 1.8E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 MC28_3701 ed6d8aad1daad6e4b5d707e336ef507c 773 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 568 766 2.3E-65 T 14-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal MC28_3701 ed6d8aad1daad6e4b5d707e336ef507c 773 SUPERFAMILY SSF64182 57 452 2.62E-122 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily MC28_3701 ed6d8aad1daad6e4b5d707e336ef507c 773 Gene3D G3DSA:3.90.1640.30 57 318 1.8E-95 T 14-10-2018 MC28_3701 ed6d8aad1daad6e4b5d707e336ef507c 773 Pfam PF02272 DHHA1 domain 315 438 1.1E-20 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 SUPERFAMILY SSF50037 282 325 2.75E-5 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 Pfam PF08279 HTH domain 6 60 1.8E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 SUPERFAMILY SSF55681 72 276 1.82E-62 T 14-10-2018 MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 Pfam PF03099 Biotin/lipoate A/B protein ligase family 91 214 3.9E-20 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 SUPERFAMILY SSF46785 3 61 1.73E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 Gene3D G3DSA:2.30.30.100 280 326 4.4E-8 T 14-10-2018 MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 Gene3D G3DSA:1.10.10.10 2 63 3.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 Pfam PF02237 Biotin protein ligase C terminal domain 280 325 1.1E-9 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 326 38.673 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 324 3.2E-70 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 MC28_0771 7c3aa6758bf20b351c142c80e1dc03dd 326 Gene3D G3DSA:3.30.930.10 69 278 1.4E-69 T 14-10-2018 MC28_3761 055356426850563ba1364c5d83d6f067 198 Pfam PF01926 50S ribosome-binding GTPase 25 143 2.6E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3761 055356426850563ba1364c5d83d6f067 198 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 5.6E-70 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 MC28_3761 055356426850563ba1364c5d83d6f067 198 SUPERFAMILY SSF52540 16 193 2.1E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3761 055356426850563ba1364c5d83d6f067 198 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 27.955 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 MC28_3761 055356426850563ba1364c5d83d6f067 198 Gene3D G3DSA:3.40.50.300 1 198 3.4E-55 T 14-10-2018 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 Pfam PF06628 Catalase-related immune-responsive 414 475 6.8E-18 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 Pfam PF00199 Catalase 8 387 1.7E-191 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 SMART SM01060 8 391 4.4E-280 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 Gene3D G3DSA:2.40.180.10 1 487 1.6E-229 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 SUPERFAMILY SSF56634 3 483 1.7E-211 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 PIRSF PIRSF038928 1 481 1.7E-201 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 PRINTS PR00067 Catalase signature 124 142 1.9E-76 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 PRINTS PR00067 Catalase signature 289 316 1.9E-76 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 PRINTS PR00067 Catalase signature 321 347 1.9E-76 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 PRINTS PR00067 Catalase signature 84 102 1.9E-76 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 PRINTS PR00067 Catalase signature 21 44 1.9E-76 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_0374 e7dce93a91361d6190949bf3ddb53704 488 PRINTS PR00067 Catalase signature 105 122 1.9E-76 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 MC28_2661 9cc394f2d9702f6a962f5ff79d225463 43 Gene3D G3DSA:1.20.1530.20 1 37 8.9E-6 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily MC28_1972 2fe11e0fd6aae3a8e9efc20191d22a9d 163 Gene3D G3DSA:3.30.428.10 7 160 4.1E-28 T 14-10-2018 IPR036265 HIT-like superfamily MC28_1972 2fe11e0fd6aae3a8e9efc20191d22a9d 163 Pfam PF01230 HIT domain 31 117 7.3E-6 T 14-10-2018 IPR001310 Histidine triad (HIT) protein MC28_1972 2fe11e0fd6aae3a8e9efc20191d22a9d 163 SUPERFAMILY SSF54197 13 155 7.27E-28 T 14-10-2018 IPR036265 HIT-like superfamily MC28_3850 402d79bde684e6e99060dbde0c6283e4 361 Gene3D G3DSA:2.40.30.40 77 164 1.9E-136 T 14-10-2018 IPR023367 Peptidase M42, domain 2 MC28_3850 402d79bde684e6e99060dbde0c6283e4 361 SUPERFAMILY SSF53187 8 355 2.88E-71 T 14-10-2018 MC28_3850 402d79bde684e6e99060dbde0c6283e4 361 Gene3D G3DSA:3.40.630.10 12 345 1.9E-136 T 14-10-2018 MC28_3850 402d79bde684e6e99060dbde0c6283e4 361 Pfam PF05343 M42 glutamyl aminopeptidase 48 342 6.0E-118 T 14-10-2018 IPR008007 Peptidase M42 MC28_3850 402d79bde684e6e99060dbde0c6283e4 361 SUPERFAMILY SSF101821 73 182 2.14E-34 T 14-10-2018 MC28_3850 402d79bde684e6e99060dbde0c6283e4 361 PIRSF PIRSF001123 4 361 3.4E-150 T 14-10-2018 IPR008007 Peptidase M42 MC28_3867 0776843ec448808a60bc033583c413d2 239 SMART SM00448 3 114 4.6E-48 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3867 0776843ec448808a60bc033583c413d2 239 SUPERFAMILY SSF46894 134 233 3.78E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_3867 0776843ec448808a60bc033583c413d2 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 4.3E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3867 0776843ec448808a60bc033583c413d2 239 Gene3D G3DSA:1.10.10.10 136 238 3.6E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3867 0776843ec448808a60bc033583c413d2 239 Pfam PF00072 Response regulator receiver domain 5 114 7.6E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3867 0776843ec448808a60bc033583c413d2 239 SUPERFAMILY SSF52172 2 129 6.12E-44 T 14-10-2018 IPR011006 CheY-like superfamily MC28_3867 0776843ec448808a60bc033583c413d2 239 SMART SM00862 156 232 1.7E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3867 0776843ec448808a60bc033583c413d2 239 Gene3D G3DSA:3.40.50.2300 1 135 4.2E-41 T 14-10-2018 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 Gene3D G3DSA:1.20.1480.50 161 253 6.3E-11 T 14-10-2018 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 SMART SM00387 380 493 4.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 SMART SM00304 195 247 4.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 Gene3D G3DSA:1.10.287.130 262 336 2.0E-16 T 14-10-2018 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 334 1.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 SUPERFAMILY SSF55874 325 491 6.94E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 SMART SM00388 269 335 2.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 Pfam PF00672 HAMP domain 195 244 2.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 9.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 9.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 9.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 9.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 492 1.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 SUPERFAMILY SSF47384 255 335 5.1E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 Gene3D G3DSA:3.30.565.10 339 493 1.0E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G290 9c1e80d5e12f461382ff72d0935d6143 494 SUPERFAMILY SSF158472 195 245 2.88E-9 T 14-10-2018 MC28_5373 e034e0edbd2d914d3bd4c752a2b535ea 144 PRINTS PR00332 Histidine triad family signature 4 20 1.1E-7 T 14-10-2018 IPR001310 Histidine triad (HIT) protein MC28_5373 e034e0edbd2d914d3bd4c752a2b535ea 144 PRINTS PR00332 Histidine triad family signature 25 43 1.1E-7 T 14-10-2018 IPR001310 Histidine triad (HIT) protein MC28_5373 e034e0edbd2d914d3bd4c752a2b535ea 144 PRINTS PR00332 Histidine triad family signature 90 100 1.1E-7 T 14-10-2018 IPR001310 Histidine triad (HIT) protein MC28_5373 e034e0edbd2d914d3bd4c752a2b535ea 144 Gene3D G3DSA:3.30.428.10 1 140 2.2E-33 T 14-10-2018 IPR036265 HIT-like superfamily MC28_5373 e034e0edbd2d914d3bd4c752a2b535ea 144 Pfam PF01230 HIT domain 12 104 4.6E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein MC28_5373 e034e0edbd2d914d3bd4c752a2b535ea 144 SUPERFAMILY SSF54197 1 132 2.94E-33 T 14-10-2018 IPR036265 HIT-like superfamily MC28_2712 8c7e28c3b86128d1f19712a6cda92c7b 349 SUPERFAMILY SSF52540 112 346 3.49E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2712 8c7e28c3b86128d1f19712a6cda92c7b 349 ProSitePatterns PS01215 Mrp family signature. 215 231 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 MC28_2712 8c7e28c3b86128d1f19712a6cda92c7b 349 SUPERFAMILY SSF117916 1 93 4.25E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily MC28_2712 8c7e28c3b86128d1f19712a6cda92c7b 349 Hamap MF_02040 Iron-sulfur cluster carrier protein. 99 346 31.872 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein MC28_2712 8c7e28c3b86128d1f19712a6cda92c7b 349 Gene3D G3DSA:3.40.50.300 106 331 6.5E-61 T 14-10-2018 MC28_2712 8c7e28c3b86128d1f19712a6cda92c7b 349 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 112 344 6.8E-83 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 MC28_2712 8c7e28c3b86128d1f19712a6cda92c7b 349 Pfam PF01883 Iron-sulfur cluster assembly protein 5 72 2.9E-17 T 14-10-2018 IPR002744 MIP18 family-like MC28_2712 8c7e28c3b86128d1f19712a6cda92c7b 349 Gene3D G3DSA:3.30.300.130 1 94 1.5E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily MC28_2091 82a0fdbe6d77ad16da481fd34584ec26 134 PIRSF PIRSF021441 1 134 6.2E-49 T 14-10-2018 IPR031306 CcdC protein MC28_2091 82a0fdbe6d77ad16da481fd34584ec26 134 Pfam PF07301 Protein of unknown function (DUF1453) 8 125 2.4E-39 T 14-10-2018 IPR009916 Protein of unknown function DUF1453 MC28_5273 ddac62af342534b439b83244fde6f806 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 376 624 6.2E-93 T 14-10-2018 IPR010650 PrkA C-terminal domain MC28_5273 ddac62af342534b439b83244fde6f806 631 Pfam PF08298 PrkA AAA domain 22 369 8.2E-150 T 14-10-2018 IPR013153 PrkA AAA domain MC28_5273 ddac62af342534b439b83244fde6f806 631 SUPERFAMILY SSF52540 67 463 9.47E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5273 ddac62af342534b439b83244fde6f806 631 PIRSF PIRSF000549 1 631 7.0E-265 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 MC28_5273 ddac62af342534b439b83244fde6f806 631 SMART SM00763 21 371 4.8E-197 T 14-10-2018 IPR013153 PrkA AAA domain MC28_4068 0663d9815933ca390d16d963a0331c53 325 Gene3D G3DSA:3.40.190.10 19 119 6.3E-17 T 14-10-2018 MC28_4068 0663d9815933ca390d16d963a0331c53 325 SUPERFAMILY SSF53850 22 249 2.1E-33 T 14-10-2018 MC28_4068 0663d9815933ca390d16d963a0331c53 325 Pfam PF13379 NMT1-like family 35 255 1.1E-26 T 14-10-2018 MC28_4068 0663d9815933ca390d16d963a0331c53 325 Gene3D G3DSA:3.40.190.10 135 324 1.4E-29 T 14-10-2018 MC28_0306 193169a9a2e05d43083d73ab5d73b967 786 Gene3D G3DSA:3.60.10.10 489 781 2.9E-41 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_0306 193169a9a2e05d43083d73ab5d73b967 786 SUPERFAMILY SSF56219 482 784 7.33E-32 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_0306 193169a9a2e05d43083d73ab5d73b967 786 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 492 773 2.2E-8 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase MC28_0306 193169a9a2e05d43083d73ab5d73b967 786 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 154 220 3.4E-18 T 14-10-2018 MC28_2223 b57e2554a6276214b5710be597d3d88a 97 SUPERFAMILY SSF54909 1 92 2.49E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_2223 b57e2554a6276214b5710be597d3d88a 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 1.8E-18 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain MC28_2223 b57e2554a6276214b5710be597d3d88a 97 Gene3D G3DSA:3.30.70.100 1 95 2.3E-25 T 14-10-2018 MC28_4430 1e95bf8e80f985f8099b0e9d1bd45ce2 280 SUPERFAMILY SSF82549 1 280 1.73E-95 T 14-10-2018 MC28_4430 1e95bf8e80f985f8099b0e9d1bd45ce2 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 278 2.5E-105 T 14-10-2018 IPR003797 DegV MC28_4430 1e95bf8e80f985f8099b0e9d1bd45ce2 280 Gene3D G3DSA:3.30.1180.10 152 280 5.7E-46 T 14-10-2018 MC28_4430 1e95bf8e80f985f8099b0e9d1bd45ce2 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 279 4.0E-98 T 14-10-2018 IPR003797 DegV MC28_4430 1e95bf8e80f985f8099b0e9d1bd45ce2 280 Gene3D G3DSA:3.40.50.10170 1 151 2.7E-52 T 14-10-2018 MC28_2576 3d54cc93b7e75413db2763901dec924e 235 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 13 228 3.5E-96 T 14-10-2018 IPR014244 RNA polymerase sigma-I type MC28_2576 3d54cc93b7e75413db2763901dec924e 235 Gene3D G3DSA:1.10.1740.10 12 93 1.6E-10 T 14-10-2018 MC28_2576 3d54cc93b7e75413db2763901dec924e 235 SUPERFAMILY SSF88946 16 95 7.53E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_2576 3d54cc93b7e75413db2763901dec924e 235 Pfam PF04542 Sigma-70 region 2 27 96 1.3E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_2576 3d54cc93b7e75413db2763901dec924e 235 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 8 230 27.966 T 14-10-2018 IPR014244 RNA polymerase sigma-I type MC28_2576 3d54cc93b7e75413db2763901dec924e 235 PIRSF PIRSF038953 5 235 3.8E-59 T 14-10-2018 IPR014244 RNA polymerase sigma-I type MC28_G304 6574eab721ea631c14fb9a5786e37b6d 44 Pfam PF00216 Bacterial DNA-binding protein 5 43 1.6E-9 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_G304 6574eab721ea631c14fb9a5786e37b6d 44 Gene3D G3DSA:4.10.520.10 3 44 2.0E-9 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_G304 6574eab721ea631c14fb9a5786e37b6d 44 SUPERFAMILY SSF47729 6 44 1.3E-8 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_C075 2bf0765caf5e05628539b5023f4893c1 238 Pfam PF13610 DDE domain 77 215 1.2E-49 T 14-10-2018 IPR032874 DDE domain MC28_C075 2bf0765caf5e05628539b5023f4893c1 238 SUPERFAMILY SSF53098 73 194 9.1E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_4209 393e462aa2b1ba57566e30480e4c2530 120 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 10 120 3.9E-51 T 14-10-2018 IPR004624 PhnA protein MC28_4209 393e462aa2b1ba57566e30480e4c2530 120 Pfam PF03831 PhnA domain 53 120 7.7E-34 T 14-10-2018 IPR013988 PhnA protein, C-terminal MC28_4209 393e462aa2b1ba57566e30480e4c2530 120 Pfam PF08274 PhnA Zinc-Ribbon 11 38 1.0E-16 T 14-10-2018 IPR013987 PhnA protein, N-terminal MC28_4209 393e462aa2b1ba57566e30480e4c2530 120 SUPERFAMILY SSF57783 10 44 9.01E-15 T 14-10-2018 MC28_4209 393e462aa2b1ba57566e30480e4c2530 120 SUPERFAMILY SSF82057 48 120 8.24E-29 T 14-10-2018 MC28_4209 393e462aa2b1ba57566e30480e4c2530 120 Gene3D G3DSA:2.20.25.10 7 49 4.1E-21 T 14-10-2018 MC28_4209 393e462aa2b1ba57566e30480e4c2530 120 Gene3D G3DSA:2.30.30.40 50 120 3.7E-35 T 14-10-2018 MC28_1626 0e8f19393d3786d3985e3f0b9648392e 743 SUPERFAMILY SSF82866 544 728 1.7E-27 T 14-10-2018 MC28_1626 0e8f19393d3786d3985e3f0b9648392e 743 Gene3D G3DSA:1.20.1640.10 175 380 3.4E-6 T 14-10-2018 MC28_1626 0e8f19393d3786d3985e3f0b9648392e 743 SUPERFAMILY SSF82866 170 360 8.5E-29 T 14-10-2018 MC28_1626 0e8f19393d3786d3985e3f0b9648392e 743 Pfam PF03176 MMPL family 496 730 6.0E-45 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 MC28_1626 0e8f19393d3786d3985e3f0b9648392e 743 Pfam PF03176 MMPL family 52 405 1.8E-60 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 MC28_0797 2075bc4338fb1785e2ac0133b80006b2 73 Pfam PF10960 BhlA holin family 11 56 4.3E-5 T 14-10-2018 IPR024405 Prophage protein BhlA/UviB MC28_0797 2075bc4338fb1785e2ac0133b80006b2 73 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 6 58 0.001 T 14-10-2018 IPR024405 Prophage protein BhlA/UviB MC28_5101 cd09fb458ffa7f452302f37b7e76122b 402 Gene3D G3DSA:3.30.70.260 326 402 1.3E-5 T 14-10-2018 MC28_5101 cd09fb458ffa7f452302f37b7e76122b 402 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 399 6.5E-153 T 14-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 MC28_5101 cd09fb458ffa7f452302f37b7e76122b 402 SUPERFAMILY SSF55021 328 401 1.13E-7 T 14-10-2018 MC28_5101 cd09fb458ffa7f452302f37b7e76122b 402 Pfam PF13291 ACT domain 328 400 3.1E-6 T 14-10-2018 IPR002912 ACT domain MC28_5101 cd09fb458ffa7f452302f37b7e76122b 402 Gene3D G3DSA:3.40.50.1100 7 308 2.4E-119 T 14-10-2018 MC28_5101 cd09fb458ffa7f452302f37b7e76122b 402 Gene3D G3DSA:3.40.50.1100 50 146 2.4E-119 T 14-10-2018 MC28_5101 cd09fb458ffa7f452302f37b7e76122b 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 303 3.7E-82 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_5101 cd09fb458ffa7f452302f37b7e76122b 402 SUPERFAMILY SSF53686 4 314 1.17E-98 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_4950 159fc5cc015594226cdf2a1566e40271 662 ProSitePatterns PS00211 ABC transporters family signature. 185 199 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4950 159fc5cc015594226cdf2a1566e40271 662 Gene3D G3DSA:1.10.287.380 576 662 2.3E-6 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 MC28_4950 159fc5cc015594226cdf2a1566e40271 662 Gene3D G3DSA:3.40.50.300 311 575 9.9E-60 T 14-10-2018 MC28_4950 159fc5cc015594226cdf2a1566e40271 662 SUPERFAMILY SSF52540 334 556 6.15E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4950 159fc5cc015594226cdf2a1566e40271 662 Pfam PF16326 ABC transporter C-terminal domain 595 660 1.8E-14 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 MC28_4950 159fc5cc015594226cdf2a1566e40271 662 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4950 159fc5cc015594226cdf2a1566e40271 662 Gene3D G3DSA:3.40.50.300 19 307 9.1E-67 T 14-10-2018 MC28_4950 159fc5cc015594226cdf2a1566e40271 662 Pfam PF00005 ABC transporter 365 494 1.1E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4950 159fc5cc015594226cdf2a1566e40271 662 Pfam PF00005 ABC transporter 37 213 4.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4950 159fc5cc015594226cdf2a1566e40271 662 SUPERFAMILY SSF52540 22 266 1.52E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4950 159fc5cc015594226cdf2a1566e40271 662 Pfam PF12848 ABC transporter 252 338 1.7E-24 T 14-10-2018 IPR032781 ABC-transporter extension domain MC28_4950 159fc5cc015594226cdf2a1566e40271 662 SMART SM00382 46 258 3.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4950 159fc5cc015594226cdf2a1566e40271 662 SMART SM00382 373 538 2.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2313 738a94be4d0306bc2ac175338f69537c 476 Gene3D G3DSA:1.10.579.10 291 476 2.7E-87 T 14-10-2018 MC28_2313 738a94be4d0306bc2ac175338f69537c 476 Pfam PF00875 DNA photolyase 6 156 9.7E-43 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 MC28_2313 738a94be4d0306bc2ac175338f69537c 476 SUPERFAMILY SSF48173 186 474 1.44E-115 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 MC28_2313 738a94be4d0306bc2ac175338f69537c 476 Gene3D G3DSA:1.25.40.80 127 282 8.3E-78 T 14-10-2018 MC28_2313 738a94be4d0306bc2ac175338f69537c 476 Pfam PF03441 FAD binding domain of DNA photolyase 271 470 1.5E-89 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 MC28_2313 738a94be4d0306bc2ac175338f69537c 476 Gene3D G3DSA:3.40.50.620 6 197 8.3E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_2313 738a94be4d0306bc2ac175338f69537c 476 PRINTS PR00147 DNA photolyase signature 136 152 4.9E-22 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 MC28_2313 738a94be4d0306bc2ac175338f69537c 476 PRINTS PR00147 DNA photolyase signature 340 358 4.9E-22 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 MC28_2313 738a94be4d0306bc2ac175338f69537c 476 PRINTS PR00147 DNA photolyase signature 320 336 4.9E-22 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 MC28_2313 738a94be4d0306bc2ac175338f69537c 476 PRINTS PR00147 DNA photolyase signature 379 393 4.9E-22 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 MC28_2313 738a94be4d0306bc2ac175338f69537c 476 SUPERFAMILY SSF52425 4 167 1.7E-48 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 MC28_1158 131b67bc45214724a14e36136800ff23 433 SMART SM00287 216 277 2.9E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1158 131b67bc45214724a14e36136800ff23 433 SMART SM00287 131 193 2.0E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1158 131b67bc45214724a14e36136800ff23 433 SMART SM00287 59 120 9.5E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1158 131b67bc45214724a14e36136800ff23 433 Gene3D G3DSA:2.30.30.40 58 122 8.6E-19 T 14-10-2018 MC28_1158 131b67bc45214724a14e36136800ff23 433 Gene3D G3DSA:2.30.30.40 215 279 4.2E-16 T 14-10-2018 MC28_1158 131b67bc45214724a14e36136800ff23 433 SUPERFAMILY SSF54001 307 431 1.6E-31 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_1158 131b67bc45214724a14e36136800ff23 433 Pfam PF00877 NlpC/P60 family 326 429 9.1E-24 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_1158 131b67bc45214724a14e36136800ff23 433 Gene3D G3DSA:3.90.1720.10 280 429 6.5E-31 T 14-10-2018 MC28_1158 131b67bc45214724a14e36136800ff23 433 SUPERFAMILY SSF50044 247 280 2.85E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 MC28_1158 131b67bc45214724a14e36136800ff23 433 SUPERFAMILY SSF50044 85 119 1.16E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 MC28_1158 131b67bc45214724a14e36136800ff23 433 Pfam PF08239 Bacterial SH3 domain 225 275 2.9E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1158 131b67bc45214724a14e36136800ff23 433 Pfam PF08239 Bacterial SH3 domain 68 117 7.0E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1158 131b67bc45214724a14e36136800ff23 433 Pfam PF08239 Bacterial SH3 domain 139 189 4.2E-16 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1158 131b67bc45214724a14e36136800ff23 433 Gene3D G3DSA:2.30.30.40 131 189 1.3E-20 T 14-10-2018 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 Gene3D G3DSA:3.40.50.720 229 435 9.3E-72 T 14-10-2018 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 SUPERFAMILY SSF48179 198 295 9.35E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 SUPERFAMILY SSF52413 301 421 4.58E-33 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 PIRSF PIRSF500134 1 434 3.3E-172 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 SUPERFAMILY SSF51735 1 190 8.07E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 PIRSF PIRSF000124 1 431 1.5E-142 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 Gene3D G3DSA:3.40.50.720 1 196 2.1E-73 T 14-10-2018 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 411 5.9E-143 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 SMART SM00984 313 415 6.3E-43 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 1.2E-64 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 314 414 2.2E-29 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 Gene3D G3DSA:1.20.5.100 197 228 2.4E-18 T 14-10-2018 MC28_E068 8f49e533a6125701fe439c12b9716ef3 436 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 290 1.0E-38 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 SUPERFAMILY SSF55874 308 447 1.96E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 Gene3D G3DSA:1.10.287.130 239 305 4.9E-11 T 14-10-2018 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 SUPERFAMILY SSF47384 228 304 1.29E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 441 7.8E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 SMART SM00387 349 457 1.7E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 SMART SM00304 184 235 1.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 SUPERFAMILY SSF158472 185 232 4.05E-7 T 14-10-2018 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 SMART SM00388 243 305 2.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 Gene3D G3DSA:3.30.565.10 307 457 1.3E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 Gene3D G3DSA:1.20.1480.50 146 238 3.0E-13 T 14-10-2018 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 303 4.1E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2049 6656aea84a3b8ff20f6c68678bb6654b 458 Pfam PF00672 HAMP domain 185 232 9.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0526 5c22e341efc72fd3b478789cd1b24ec7 470 SUPERFAMILY SSF55103 220 460 4.58E-71 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 MC28_0526 5c22e341efc72fd3b478789cd1b24ec7 470 SUPERFAMILY SSF56176 5 217 1.73E-75 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_0526 5c22e341efc72fd3b478789cd1b24ec7 470 Pfam PF01565 FAD binding domain 41 180 6.2E-43 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 MC28_0526 5c22e341efc72fd3b478789cd1b24ec7 470 Gene3D G3DSA:3.30.465.40 3 237 4.4E-78 T 14-10-2018 MC28_0526 5c22e341efc72fd3b478789cd1b24ec7 470 Gene3D G3DSA:1.10.45.10 418 457 1.5E-11 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 MC28_0526 5c22e341efc72fd3b478789cd1b24ec7 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 456 3.2E-74 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 MC28_0526 5c22e341efc72fd3b478789cd1b24ec7 470 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 44 456 1.1E-179 T 14-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 MC28_0526 5c22e341efc72fd3b478789cd1b24ec7 470 Gene3D G3DSA:3.30.70.2740 336 417 4.3E-14 T 14-10-2018 MC28_2605 43f7ab15a166c2daa2451b4ed3a60ff7 310 SUPERFAMILY SSF55729 78 297 3.59E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2605 43f7ab15a166c2daa2451b4ed3a60ff7 310 Pfam PF00583 Acetyltransferase (GNAT) family 185 288 7.0E-9 T 14-10-2018 IPR000182 GNAT domain MC28_2605 43f7ab15a166c2daa2451b4ed3a60ff7 310 Gene3D G3DSA:3.40.630.30 1 305 4.2E-52 T 14-10-2018 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 Pfam PF02863 Arginine repressor, C-terminal domain 82 145 1.6E-25 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 SUPERFAMILY SSF46785 5 78 6.28E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 Gene3D G3DSA:3.30.1360.40 68 149 6.8E-31 T 14-10-2018 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 1.0E-28 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.0E-28 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.0E-28 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 1.0E-28 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 149 8.3E-53 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 SUPERFAMILY SSF55252 80 149 1.96E-22 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 Gene3D G3DSA:1.10.10.10 4 67 9.0E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 71.897 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 7.2E-31 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 MC28_3467 559d6e6e30e6b761c0924a760fd97357 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 4.0E-31 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 MC28_1029 d1de5b263fddf84cf8a55b0c8fd39be0 160 Pfam PF01625 Peptide methionine sulfoxide reductase 3 141 4.8E-51 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_1029 d1de5b263fddf84cf8a55b0c8fd39be0 160 SUPERFAMILY SSF55068 3 148 1.15E-59 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_1029 d1de5b263fddf84cf8a55b0c8fd39be0 160 Gene3D G3DSA:3.30.1060.10 1 148 7.3E-55 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_1029 d1de5b263fddf84cf8a55b0c8fd39be0 160 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 140 1.9E-54 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_1029 d1de5b263fddf84cf8a55b0c8fd39be0 160 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 147 27.893 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 MC28_2321 4bd27947b7a7ccda690b6cfbc4e80fc5 185 PRINTS PR01754 Streptothricin acetyltransferase signature 127 142 2.3E-19 T 14-10-2018 IPR008125 Streptothricin acetyltransferase MC28_2321 4bd27947b7a7ccda690b6cfbc4e80fc5 185 PRINTS PR01754 Streptothricin acetyltransferase signature 103 118 2.3E-19 T 14-10-2018 IPR008125 Streptothricin acetyltransferase MC28_2321 4bd27947b7a7ccda690b6cfbc4e80fc5 185 PRINTS PR01754 Streptothricin acetyltransferase signature 171 184 2.3E-19 T 14-10-2018 IPR008125 Streptothricin acetyltransferase MC28_2321 4bd27947b7a7ccda690b6cfbc4e80fc5 185 PRINTS PR01754 Streptothricin acetyltransferase signature 148 164 2.3E-19 T 14-10-2018 IPR008125 Streptothricin acetyltransferase MC28_2321 4bd27947b7a7ccda690b6cfbc4e80fc5 185 SUPERFAMILY SSF55729 1 166 3.82E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2321 4bd27947b7a7ccda690b6cfbc4e80fc5 185 Pfam PF00583 Acetyltransferase (GNAT) family 53 156 2.3E-22 T 14-10-2018 IPR000182 GNAT domain MC28_2321 4bd27947b7a7ccda690b6cfbc4e80fc5 185 Gene3D G3DSA:3.40.630.30 1 185 9.4E-60 T 14-10-2018 MC28_1041 89123cc202b190d1c5683ce0fc0184f0 253 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 240 4.8E-43 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 MC28_1041 89123cc202b190d1c5683ce0fc0184f0 253 Gene3D G3DSA:3.40.830.10 1 253 1.6E-83 T 14-10-2018 MC28_1041 89123cc202b190d1c5683ce0fc0184f0 253 PIRSF PIRSF006157 1 253 8.2E-95 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 MC28_1041 89123cc202b190d1c5683ce0fc0184f0 253 SUPERFAMILY SSF53213 1 253 9.68E-81 T 14-10-2018 MC28_2745 d989288df1a8a18e1f3f28e1772ba860 343 SUPERFAMILY SSF51735 2 197 6.19E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2745 d989288df1a8a18e1f3f28e1772ba860 343 Gene3D G3DSA:3.30.360.10 122 335 3.1E-124 T 14-10-2018 MC28_2745 d989288df1a8a18e1f3f28e1772ba860 343 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 3.3E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 MC28_2745 d989288df1a8a18e1f3f28e1772ba860 343 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 237 7.8E-18 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 MC28_2745 d989288df1a8a18e1f3f28e1772ba860 343 Gene3D G3DSA:3.40.50.720 6 312 3.1E-124 T 14-10-2018 MC28_4629 c3f194dc0446eb8e865e30a974d1984c 273 Gene3D G3DSA:3.30.1240.10 87 191 1.3E-88 T 14-10-2018 MC28_4629 c3f194dc0446eb8e865e30a974d1984c 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 261 2.8E-70 T 14-10-2018 MC28_4629 c3f194dc0446eb8e865e30a974d1984c 273 Gene3D G3DSA:3.40.50.1000 4 263 1.3E-88 T 14-10-2018 IPR023214 HAD superfamily MC28_4629 c3f194dc0446eb8e865e30a974d1984c 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 235 3.7E-27 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 MC28_4629 c3f194dc0446eb8e865e30a974d1984c 273 SUPERFAMILY SSF56784 1 267 1.4E-76 T 14-10-2018 IPR036412 HAD-like superfamily MC28_4629 c3f194dc0446eb8e865e30a974d1984c 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 14-10-2018 MC28_4629 c3f194dc0446eb8e865e30a974d1984c 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 261 1.3E-69 T 14-10-2018 IPR000150 Cof family GO:0016787 MC28_2657 efedaf9b397bbd93fd81c4e0897dbc96 364 SUPERFAMILY SSF48452 126 260 5.44E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_2657 efedaf9b397bbd93fd81c4e0897dbc96 364 SMART SM00028 246 279 280.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2657 efedaf9b397bbd93fd81c4e0897dbc96 364 SMART SM00028 172 205 5.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2657 efedaf9b397bbd93fd81c4e0897dbc96 364 SMART SM00028 324 357 240.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2657 efedaf9b397bbd93fd81c4e0897dbc96 364 SMART SM00028 91 124 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2657 efedaf9b397bbd93fd81c4e0897dbc96 364 SMART SM00028 131 164 48.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2657 efedaf9b397bbd93fd81c4e0897dbc96 364 SMART SM00028 212 245 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2657 efedaf9b397bbd93fd81c4e0897dbc96 364 Gene3D G3DSA:1.25.40.10 4 364 1.1E-90 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_D110 83781a3097f906e0b5c44909d1b2cd00 440 Gene3D G3DSA:3.40.50.300 182 379 4.5E-38 T 14-10-2018 MC28_D110 83781a3097f906e0b5c44909d1b2cd00 440 Gene3D G3DSA:3.30.450.380 5 178 8.1E-11 T 14-10-2018 MC28_D110 83781a3097f906e0b5c44909d1b2cd00 440 Pfam PF00437 Type II/IV secretion system protein 92 344 5.5E-33 T 14-10-2018 IPR001482 Type II/IV secretion system protein MC28_D110 83781a3097f906e0b5c44909d1b2cd00 440 SUPERFAMILY SSF52540 65 342 2.47E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_D110 83781a3097f906e0b5c44909d1b2cd00 440 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 Pfam PF00672 HAMP domain 338 385 4.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 SUPERFAMILY SSF47384 390 469 1.88E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 SMART SM00387 513 624 4.9E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 SMART SM00304 337 389 7.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 Gene3D G3DSA:1.10.287.130 396 474 3.2E-19 T 14-10-2018 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 Gene3D G3DSA:1.20.1480.50 298 395 3.3E-14 T 14-10-2018 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 Pfam PF00512 His Kinase A (phospho-acceptor) domain 405 469 6.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 578 1.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 564 1.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 603 1.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 SUPERFAMILY SSF158472 338 388 4.97E-9 T 14-10-2018 MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 Gene3D G3DSA:3.30.565.10 475 624 1.8E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 SUPERFAMILY SSF55874 459 620 5.89E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 620 1.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4097 7e52a6a71123c447de89ca88ce99f5a8 624 SMART SM00388 404 469 1.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 Gene3D G3DSA:3.20.20.70 5 492 1.5E-226 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 15 461 1.7E-200 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 SMART SM01240 14 479 0.0 T 14-10-2018 MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 SMART SM00116 103 153 2.1E-6 T 14-10-2018 IPR000644 CBS domain MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 SMART SM00116 166 214 7.3E-9 T 14-10-2018 IPR000644 CBS domain MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 303 315 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 15 479 3.3E-167 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 Pfam PF00571 CBS domain 102 149 3.4E-6 T 14-10-2018 IPR000644 CBS domain MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 Pfam PF00571 CBS domain 158 209 6.2E-8 T 14-10-2018 IPR000644 CBS domain MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 15 492 87.2 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 PIRSF PIRSF000130 6 492 2.7E-210 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 SUPERFAMILY SSF54631 71 213 8.34E-32 T 14-10-2018 MC28_4728 8381fd52f2aabe0d8ce8b64faa734672 492 SUPERFAMILY SSF51412 10 483 1.7E-125 T 14-10-2018 MC28_4531 6252b7603064c428479e15cf32ce8975 174 Gene3D G3DSA:1.20.120.1200 5 166 5.3E-38 T 14-10-2018 MC28_4531 6252b7603064c428479e15cf32ce8975 174 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 162 1.3E-34 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_2391 c2450119fc22c9f6a2169a92f72a06f7 345 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 2 342 7.5E-153 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 MC28_2391 c2450119fc22c9f6a2169a92f72a06f7 345 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 172 191 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MC28_2391 c2450119fc22c9f6a2169a92f72a06f7 345 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 344 45.807 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 MC28_2391 c2450119fc22c9f6a2169a92f72a06f7 345 Gene3D G3DSA:3.90.1150.10 242 344 6.8E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2391 c2450119fc22c9f6a2169a92f72a06f7 345 Pfam PF00266 Aminotransferase class-V 2 333 1.6E-47 T 14-10-2018 IPR000192 Aminotransferase class V domain MC28_2391 c2450119fc22c9f6a2169a92f72a06f7 345 Gene3D G3DSA:3.40.640.10 2 241 3.8E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2391 c2450119fc22c9f6a2169a92f72a06f7 345 PIRSF PIRSF000525 1 345 7.4E-148 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 MC28_2391 c2450119fc22c9f6a2169a92f72a06f7 345 SUPERFAMILY SSF53383 2 341 1.48E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3931 efc9ae9c45ad765aaab64188e21127e9 159 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site MC28_3931 efc9ae9c45ad765aaab64188e21127e9 159 Pfam PF13185 GAF domain 50 154 2.6E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_3931 efc9ae9c45ad765aaab64188e21127e9 159 Gene3D G3DSA:3.30.450.40 3 159 2.1E-67 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_3931 efc9ae9c45ad765aaab64188e21127e9 159 SUPERFAMILY SSF55781 11 156 6.13E-47 T 14-10-2018 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 SUPERFAMILY SSF48452 8 212 7.59E-41 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 Pfam PF13181 Tetratricopeptide repeat 141 170 0.0035 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 Pfam PF00515 Tetratricopeptide repeat 171 204 8.9E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 Pfam PF13176 Tetratricopeptide repeat 108 137 0.035 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 Gene3D G3DSA:1.25.40.10 160 218 1.8E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 Pfam PF13414 TPR repeat 49 82 3.3E-8 T 14-10-2018 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 Gene3D G3DSA:1.25.40.10 2 159 1.5E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 SMART SM00028 137 170 0.039 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 SMART SM00028 35 68 0.0021 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 SMART SM00028 103 136 1.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 SMART SM00028 69 102 0.15 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 SMART SM00028 171 204 3.3E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 SMART SM00028 1 34 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_3686 534c525bcd24f33cb8813c2bd0a8e4ca 219 Pfam PF07719 Tetratricopeptide repeat 8 34 1.4E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 MC28_G014 65ab3c546795f399d0b73faefe905141 263 Gene3D G3DSA:2.60.120.10 118 257 4.6E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_G014 65ab3c546795f399d0b73faefe905141 263 SUPERFAMILY SSF51182 4 239 5.13E-49 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_G014 65ab3c546795f399d0b73faefe905141 263 Gene3D G3DSA:2.60.120.10 19 117 1.3E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_G014 65ab3c546795f399d0b73faefe905141 263 Pfam PF04962 KduI/IolB family 11 251 1.9E-64 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 MC28_G014 65ab3c546795f399d0b73faefe905141 263 PIRSF PIRSF036628 2 257 3.2E-88 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 MC28_5152 519da77c4e1a2cd60648dba3a2f52106 374 SUPERFAMILY SSF56349 64 365 3.53E-74 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_5152 519da77c4e1a2cd60648dba3a2f52106 374 Gene3D G3DSA:1.10.150.130 58 166 6.1E-30 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_5152 519da77c4e1a2cd60648dba3a2f52106 374 Gene3D G3DSA:1.10.443.10 167 371 4.3E-58 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_5152 519da77c4e1a2cd60648dba3a2f52106 374 Pfam PF00589 Phage integrase family 185 357 2.6E-30 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_5152 519da77c4e1a2cd60648dba3a2f52106 374 Pfam PF14657 Arm DNA-binding domain 11 55 5.1E-17 T 14-10-2018 IPR028259 AP2-like integrase, N-terminal domain MC28_5152 519da77c4e1a2cd60648dba3a2f52106 374 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 64 121 1.9E-18 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_0567 8658f83f56c7bca5d4b3ae5a961defee 564 Pfam PF01432 Peptidase family M3 166 270 3.2E-4 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 MC28_0567 8658f83f56c7bca5d4b3ae5a961defee 564 Pfam PF01432 Peptidase family M3 311 546 1.2E-20 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 MC28_0567 8658f83f56c7bca5d4b3ae5a961defee 564 Gene3D G3DSA:1.10.1370.30 1 564 6.9E-234 T 14-10-2018 MC28_0567 8658f83f56c7bca5d4b3ae5a961defee 564 SUPERFAMILY SSF55486 33 558 2.32E-124 T 14-10-2018 MC28_0567 8658f83f56c7bca5d4b3ae5a961defee 564 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 13 560 1.2E-250 T 14-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related MC28_0571 cca3cdc97e125096ef3d7cc847fd53aa 223 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 9 207 1.1E-83 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 MC28_0571 cca3cdc97e125096ef3d7cc847fd53aa 223 Gene3D G3DSA:3.40.50.620 4 221 7.3E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_0571 cca3cdc97e125096ef3d7cc847fd53aa 223 PIRSF PIRSF006293 5 221 7.2E-78 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 MC28_0571 cca3cdc97e125096ef3d7cc847fd53aa 223 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 7 220 52.095 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 MC28_0571 cca3cdc97e125096ef3d7cc847fd53aa 223 Pfam PF06508 Queuosine biosynthesis protein QueC 8 214 2.3E-85 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 MC28_0571 cca3cdc97e125096ef3d7cc847fd53aa 223 SUPERFAMILY SSF52402 6 214 8.82E-69 T 14-10-2018 MC28_1403 b8b68de6c427e7eda7bed0c2eaa1ea35 153 Gene3D G3DSA:3.40.630.30 8 146 2.1E-35 T 14-10-2018 MC28_1403 b8b68de6c427e7eda7bed0c2eaa1ea35 153 SUPERFAMILY SSF55729 8 150 6.03E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1403 b8b68de6c427e7eda7bed0c2eaa1ea35 153 Pfam PF00583 Acetyltransferase (GNAT) family 48 140 3.6E-15 T 14-10-2018 IPR000182 GNAT domain MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 SUPERFAMILY SSF56601 20 323 2.11E-78 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 SUPERFAMILY SSF69189 315 404 5.89E-17 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 Gene3D G3DSA:2.60.410.10 324 425 6.7E-16 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 323 425 1.7E-12 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 SMART SM00936 323 425 1.5E-16 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 Gene3D G3DSA:3.40.710.10 45 323 4.5E-91 T 14-10-2018 MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 51 303 3.9E-85 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 167 180 4.4E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 157 4.4E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_1702 a6438da79f6b3949763cfa43dd6c2422 453 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 83 94 4.4E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Gene3D G3DSA:3.30.1360.40 234 330 4.0E-195 T 14-10-2018 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Gene3D G3DSA:2.120.10.90 498 807 2.6E-98 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 SMART SM00434 9 462 6.1E-260 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 5 803 34.005 T 14-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 6 744 0.0 T 14-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 SUPERFAMILY SSF101904 498 803 7.46E-91 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Gene3D G3DSA:3.90.199.10 30 483 4.0E-195 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Gene3D G3DSA:1.10.268.10 367 455 4.0E-195 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 469 1.8E-149 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 SUPERFAMILY SSF56719 29 483 1.57E-167 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 655 696 1.2E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 607 650 2.9E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 503 517 1.5 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 549 597 6.7E-5 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_2746 83e90976643b3137a1e0750ac2d5c82e 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 705 753 1.1E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MC28_0266 d9c21ec80d9a3bfa5fd4b348b8888324 186 PIRSF PIRSF016897 1 186 3.0E-65 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 MC28_0266 d9c21ec80d9a3bfa5fd4b348b8888324 186 Gene3D G3DSA:3.20.20.400 1 186 9.3E-72 T 14-10-2018 IPR035928 GlpP-like superfamily MC28_0266 d9c21ec80d9a3bfa5fd4b348b8888324 186 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 8 180 4.5E-64 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 MC28_0266 d9c21ec80d9a3bfa5fd4b348b8888324 186 SUPERFAMILY SSF110391 8 181 7.45E-63 T 14-10-2018 IPR035928 GlpP-like superfamily MC28_2326 82811122ab63a39f7fa078b992fb0f68 277 SUPERFAMILY SSF55729 169 272 8.46E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2326 82811122ab63a39f7fa078b992fb0f68 277 Gene3D G3DSA:3.40.630.30 125 262 7.0E-34 T 14-10-2018 MC28_2326 82811122ab63a39f7fa078b992fb0f68 277 Pfam PF12746 GNAT acetyltransferase 18 271 3.0E-64 T 14-10-2018 IPR027365 GNAT acetyltransferase YdfB-like MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 Gene3D G3DSA:1.20.1080.10 1 244 2.4E-75 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 230 9.4E-63 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.7E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 PRINTS PR00783 Major intrinsic protein family signature 44 68 3.7E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 PRINTS PR00783 Major intrinsic protein family signature 81 100 3.7E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.7E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 PRINTS PR00783 Major intrinsic protein family signature 213 233 3.7E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.7E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 SUPERFAMILY SSF81338 2 234 4.45E-73 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 Pfam PF00230 Major intrinsic protein 3 230 5.5E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_0267 e8f21aa426bd7c2d3928387380cccd05 273 ProSitePatterns PS00221 MIP family signature. 62 70 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 MC28_3839 5f46e620b790919787741568f5a9835e 463 SUPERFAMILY SSF55681 104 460 2.4E-100 T 14-10-2018 MC28_3839 5f46e620b790919787741568f5a9835e 463 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 463 46.294 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 MC28_3839 5f46e620b790919787741568f5a9835e 463 Gene3D G3DSA:2.40.50.140 2 105 4.5E-22 T 14-10-2018 MC28_3839 5f46e620b790919787741568f5a9835e 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 378 394 2.9E-12 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3839 5f46e620b790919787741568f5a9835e 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 418 432 2.9E-12 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3839 5f46e620b790919787741568f5a9835e 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 205 217 2.9E-12 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3839 5f46e620b790919787741568f5a9835e 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 221 234 2.9E-12 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3839 5f46e620b790919787741568f5a9835e 463 Gene3D G3DSA:3.30.930.10 106 461 3.0E-117 T 14-10-2018 MC28_3839 5f46e620b790919787741568f5a9835e 463 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 463 1.1E-191 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 MC28_3839 5f46e620b790919787741568f5a9835e 463 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 457 3.1E-89 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3839 5f46e620b790919787741568f5a9835e 463 Pfam PF01336 OB-fold nucleic acid binding domain 21 97 1.4E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 MC28_3839 5f46e620b790919787741568f5a9835e 463 SUPERFAMILY SSF50249 13 102 1.19E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_G287 f5374ef01f776397ab4fdd7a685c73bd 388 Pfam PF01580 FtsK/SpoIIIE family 119 290 5.0E-24 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MC28_G287 f5374ef01f776397ab4fdd7a685c73bd 388 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 147 160 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_G287 f5374ef01f776397ab4fdd7a685c73bd 388 Gene3D G3DSA:3.40.50.300 109 372 1.3E-58 T 14-10-2018 MC28_G287 f5374ef01f776397ab4fdd7a685c73bd 388 SUPERFAMILY SSF52540 112 312 1.02E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2531 16c434aa8e233f553d86e52fbb826577 279 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 129 146 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_2531 16c434aa8e233f553d86e52fbb826577 279 Pfam PF00248 Aldo/keto reductase family 30 265 1.8E-50 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_2531 16c434aa8e233f553d86e52fbb826577 279 PRINTS PR00069 Aldo-keto reductase signature 99 117 2.5E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_2531 16c434aa8e233f553d86e52fbb826577 279 PRINTS PR00069 Aldo-keto reductase signature 200 224 2.5E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_2531 16c434aa8e233f553d86e52fbb826577 279 PRINTS PR00069 Aldo-keto reductase signature 129 146 2.5E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_2531 16c434aa8e233f553d86e52fbb826577 279 PRINTS PR00069 Aldo-keto reductase signature 163 192 2.5E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_2531 16c434aa8e233f553d86e52fbb826577 279 PRINTS PR00069 Aldo-keto reductase signature 39 63 2.5E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_2531 16c434aa8e233f553d86e52fbb826577 279 SUPERFAMILY SSF51430 5 274 2.75E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_2531 16c434aa8e233f553d86e52fbb826577 279 Gene3D G3DSA:3.20.20.100 1 279 1.4E-126 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_2531 16c434aa8e233f553d86e52fbb826577 279 PIRSF PIRSF000097 1 124 2.2E-42 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_2531 16c434aa8e233f553d86e52fbb826577 279 PIRSF PIRSF000097 119 276 4.5E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_2531 16c434aa8e233f553d86e52fbb826577 279 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 43 60 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_2531 16c434aa8e233f553d86e52fbb826577 279 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 233 248 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_1055 e83ac046de5b7d94387fed3abafe1128 306 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 256 36.084 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 MC28_1055 e83ac046de5b7d94387fed3abafe1128 306 Gene3D G3DSA:3.40.250.10 91 240 2.1E-45 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_1055 e83ac046de5b7d94387fed3abafe1128 306 SMART SM00450 104 205 1.6E-18 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_1055 e83ac046de5b7d94387fed3abafe1128 306 SUPERFAMILY SSF52821 77 235 2.33E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_1055 e83ac046de5b7d94387fed3abafe1128 306 Pfam PF12368 Rhodanase C-terminal 211 277 2.1E-14 T 14-10-2018 IPR022111 Rhodanase, C-terminal MC28_1055 e83ac046de5b7d94387fed3abafe1128 306 Pfam PF00581 Rhodanese-like domain 105 199 4.4E-11 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_1055 e83ac046de5b7d94387fed3abafe1128 306 Gene3D G3DSA:3.30.70.100 1 86 4.6E-26 T 14-10-2018 MC28_B61 2d2ce44533be92abd7c2d185db25e086 176 SUPERFAMILY SSF52980 8 170 9.65E-50 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 MC28_B61 2d2ce44533be92abd7c2d185db25e086 176 PIRSF PIRSF037785 1 175 1.5E-62 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 MC28_B61 2d2ce44533be92abd7c2d185db25e086 176 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 176 56.78 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 MC28_B61 2d2ce44533be92abd7c2d185db25e086 176 Gene3D G3DSA:3.40.1350.10 7 172 2.1E-54 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 MC28_B61 2d2ce44533be92abd7c2d185db25e086 176 Pfam PF03838 Recombination protein U 6 168 3.4E-45 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 MC28_5124 1d955f20882aa4dee365f32344e5390f 198 Gene3D G3DSA:2.60.60.30 20 195 4.8E-57 T 14-10-2018 MC28_5124 1d955f20882aa4dee365f32344e5390f 198 Pfam PF02342 TerD domain 1 197 1.5E-67 T 14-10-2018 IPR003325 TerD domain MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 Gene3D G3DSA:4.10.320.10 98 164 4.5E-20 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 SUPERFAMILY SSF51230 3 92 1.44E-25 T 14-10-2018 IPR011053 Single hybrid motif MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 Gene3D G3DSA:2.40.50.100 2 81 2.1E-25 T 14-10-2018 MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 Pfam PF02817 e3 binding domain 122 156 5.0E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 SUPERFAMILY SSF47005 119 161 2.49E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 SUPERFAMILY SSF52777 190 426 7.56E-88 T 14-10-2018 MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 Pfam PF00364 Biotin-requiring enzyme 4 75 1.2E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 Gene3D G3DSA:3.30.559.10 184 427 2.6E-90 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 199 426 1.1E-88 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 MC28_3259 39f750b0865f8e8c7c3d3f9dae2af091 429 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 MC28_0772 8ff41a916f4865b5a7f8d50645bf2aee 129 Gene3D G3DSA:2.60.40.420 30 129 1.9E-39 T 14-10-2018 IPR008972 Cupredoxin MC28_0772 8ff41a916f4865b5a7f8d50645bf2aee 129 SUPERFAMILY SSF49503 37 128 1.31E-15 T 14-10-2018 IPR008972 Cupredoxin MC28_0772 8ff41a916f4865b5a7f8d50645bf2aee 129 Pfam PF13473 Cupredoxin-like domain 36 128 1.4E-22 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 Pfam PF06580 Histidine kinase 369 447 1.2E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 Pfam PF13492 GAF domain 233 355 2.0E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 Gene3D G3DSA:1.10.1760.20 51 207 1.3E-5 T 14-10-2018 MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 SMART SM00065 229 364 1.4E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 SUPERFAMILY SSF55874 424 568 4.32E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 Gene3D G3DSA:3.30.450.40 232 355 8.6E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 Pfam PF07694 5TMR of 5TMR-LYT 20 198 1.4E-49 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 569 5.0E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 SMART SM00387 462 571 3.4E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 SUPERFAMILY SSF55781 231 355 3.08E-9 T 14-10-2018 MC28_4675 59a4bd0eb56ac9a3966e587f1be17929 583 Gene3D G3DSA:3.30.565.10 419 572 2.2E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2904 51962ad63eb992f70d201f1cb8cd6a9d 323 Gene3D G3DSA:3.40.50.1980 170 323 1.6E-41 T 14-10-2018 MC28_2904 51962ad63eb992f70d201f1cb8cd6a9d 323 Pfam PF01497 Periplasmic binding protein 66 294 6.1E-35 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_2904 51962ad63eb992f70d201f1cb8cd6a9d 323 Gene3D G3DSA:3.40.50.1980 45 169 1.3E-31 T 14-10-2018 MC28_2904 51962ad63eb992f70d201f1cb8cd6a9d 323 SUPERFAMILY SSF53807 52 316 9.03E-59 T 14-10-2018 MC28_4196 c3f3db48d9290f1774c3250d8086b1f8 159 Pfam PF14526 Integron-associated effector binding protein 7 157 8.7E-31 T 14-10-2018 IPR029441 Integron-associated effector binding protein MC28_4196 c3f3db48d9290f1774c3250d8086b1f8 159 SUPERFAMILY SSF55136 6 158 5.23E-24 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_4196 c3f3db48d9290f1774c3250d8086b1f8 159 SMART SM00871 3 159 7.1E-36 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding MC28_4196 c3f3db48d9290f1774c3250d8086b1f8 159 Gene3D G3DSA:3.20.80.10 1 158 1.5E-44 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_3374 807b71b20e73587e32d7ad1563471d97 150 Gene3D G3DSA:1.10.10.10 13 150 6.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3374 807b71b20e73587e32d7ad1563471d97 150 SMART SM00347 43 139 3.6E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3374 807b71b20e73587e32d7ad1563471d97 150 SUPERFAMILY SSF46785 19 149 1.34E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3374 807b71b20e73587e32d7ad1563471d97 150 Pfam PF01047 MarR family 48 104 1.4E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3374 807b71b20e73587e32d7ad1563471d97 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 5.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3374 807b71b20e73587e32d7ad1563471d97 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 5.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3374 807b71b20e73587e32d7ad1563471d97 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 129 149 5.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3374 807b71b20e73587e32d7ad1563471d97 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 5.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2788 c01e91a0b457371f7bfa1cfb7594ef93 203 SUPERFAMILY SSF53474 2 199 3.19E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2788 c01e91a0b457371f7bfa1cfb7594ef93 203 Pfam PF01738 Dienelactone hydrolase family 78 184 5.6E-9 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 MC28_2788 c01e91a0b457371f7bfa1cfb7594ef93 203 Gene3D G3DSA:3.40.50.1820 1 200 3.5E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3945 13660418f49000d33feb0767d6631c2a 339 PRINTS PR01270 Histone deacetylase superfamily signature 112 127 4.6E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 MC28_3945 13660418f49000d33feb0767d6631c2a 339 PRINTS PR01270 Histone deacetylase superfamily signature 79 102 4.6E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 MC28_3945 13660418f49000d33feb0767d6631c2a 339 PRINTS PR01270 Histone deacetylase superfamily signature 198 208 4.6E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 MC28_3945 13660418f49000d33feb0767d6631c2a 339 SUPERFAMILY SSF52768 2 309 4.8E-95 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily MC28_3945 13660418f49000d33feb0767d6631c2a 339 Pfam PF00850 Histone deacetylase domain 2 265 7.5E-74 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 MC28_3945 13660418f49000d33feb0767d6631c2a 339 PRINTS PR01272 Acetoin utilisation ACUC protein signature 262 281 1.9E-32 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 MC28_3945 13660418f49000d33feb0767d6631c2a 339 PRINTS PR01272 Acetoin utilisation ACUC protein signature 300 319 1.9E-32 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 MC28_3945 13660418f49000d33feb0767d6631c2a 339 PRINTS PR01272 Acetoin utilisation ACUC protein signature 35 49 1.9E-32 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 MC28_3945 13660418f49000d33feb0767d6631c2a 339 PRINTS PR01272 Acetoin utilisation ACUC protein signature 56 69 1.9E-32 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 MC28_3945 13660418f49000d33feb0767d6631c2a 339 PRINTS PR01272 Acetoin utilisation ACUC protein signature 223 239 1.9E-32 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 MC28_3945 13660418f49000d33feb0767d6631c2a 339 PRINTS PR01272 Acetoin utilisation ACUC protein signature 283 299 1.9E-32 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 MC28_3945 13660418f49000d33feb0767d6631c2a 339 Gene3D G3DSA:3.40.800.20 1 289 1.5E-88 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 48 111 6.1E-10 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 Gene3D G3DSA:1.10.287.90 29 116 1.6E-29 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 PRINTS PR01166 Cytochrome c oxidase subunit II signature 192 209 2.9E-6 T 14-10-2018 MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 PRINTS PR01166 Cytochrome c oxidase subunit II signature 87 99 2.9E-6 T 14-10-2018 MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 PRINTS PR01166 Cytochrome c oxidase subunit II signature 99 119 2.9E-6 T 14-10-2018 MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 SUPERFAMILY SSF49503 128 274 3.45E-42 T 14-10-2018 IPR008972 Cupredoxin MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 PIRSF PIRSF000292 2 291 9.7E-104 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 Gene3D G3DSA:2.60.40.420 117 282 1.0E-40 T 14-10-2018 IPR008972 Cupredoxin MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 16 241 1.8E-91 T 14-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 MC28_5428 03c9aa1ef296b2050d6176626d5f10bc 291 SUPERFAMILY SSF81464 19 120 8.67E-23 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_0405 1e585c7b130bed82b7ee69fbfbaf2eef 311 Pfam PF00005 ABC transporter 29 181 7.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0405 1e585c7b130bed82b7ee69fbfbaf2eef 311 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 278 8.5E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_0405 1e585c7b130bed82b7ee69fbfbaf2eef 311 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0405 1e585c7b130bed82b7ee69fbfbaf2eef 311 SUPERFAMILY SSF52540 8 253 5.57E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0405 1e585c7b130bed82b7ee69fbfbaf2eef 311 SMART SM00382 37 231 3.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0405 1e585c7b130bed82b7ee69fbfbaf2eef 311 Gene3D G3DSA:3.40.50.300 6 310 1.6E-94 T 14-10-2018 MC28_0063 57878af585ece2bcfcf1fdbf14742200 313 SUPERFAMILY SSF51735 111 281 6.53E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0063 57878af585ece2bcfcf1fdbf14742200 313 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 12 105 2.9E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_0063 57878af585ece2bcfcf1fdbf14742200 313 Gene3D G3DSA:3.90.180.10 3 304 1.0E-88 T 14-10-2018 MC28_0063 57878af585ece2bcfcf1fdbf14742200 313 SUPERFAMILY SSF50129 1 151 4.41E-26 T 14-10-2018 IPR011032 GroES-like superfamily MC28_0063 57878af585ece2bcfcf1fdbf14742200 313 SMART SM00829 1 304 4.0E-10 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_0063 57878af585ece2bcfcf1fdbf14742200 313 Pfam PF13602 Zinc-binding dehydrogenase 180 304 6.3E-26 T 14-10-2018 MC28_0063 57878af585ece2bcfcf1fdbf14742200 313 Gene3D G3DSA:3.40.50.720 129 244 1.0E-88 T 14-10-2018 MC28_0918 b41106d21c1844a068f9303a36453135 432 PIRSF PIRSF000337 10 429 8.0E-112 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 MC28_0918 b41106d21c1844a068f9303a36453135 432 Gene3D G3DSA:3.20.20.30 3 428 1.8E-100 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_0918 b41106d21c1844a068f9303a36453135 432 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 18 420 1.2E-102 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 MC28_0918 b41106d21c1844a068f9303a36453135 432 Pfam PF00296 Luciferase-like monooxygenase 26 375 7.4E-56 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MC28_0918 b41106d21c1844a068f9303a36453135 432 SUPERFAMILY SSF51679 27 423 1.05E-92 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_5090 50fb6903075d72cccf591553b3099d71 320 PRINTS PR01469 Bacterial carbamate kinase signature 110 129 3.5E-65 T 14-10-2018 MC28_5090 50fb6903075d72cccf591553b3099d71 320 PRINTS PR01469 Bacterial carbamate kinase signature 159 178 3.5E-65 T 14-10-2018 MC28_5090 50fb6903075d72cccf591553b3099d71 320 PRINTS PR01469 Bacterial carbamate kinase signature 43 62 3.5E-65 T 14-10-2018 MC28_5090 50fb6903075d72cccf591553b3099d71 320 PRINTS PR01469 Bacterial carbamate kinase signature 267 282 3.5E-65 T 14-10-2018 MC28_5090 50fb6903075d72cccf591553b3099d71 320 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 3.5E-65 T 14-10-2018 MC28_5090 50fb6903075d72cccf591553b3099d71 320 PRINTS PR01469 Bacterial carbamate kinase signature 182 200 3.5E-65 T 14-10-2018 MC28_5090 50fb6903075d72cccf591553b3099d71 320 PRINTS PR01469 Bacterial carbamate kinase signature 212 227 3.5E-65 T 14-10-2018 MC28_5090 50fb6903075d72cccf591553b3099d71 320 SUPERFAMILY SSF53633 4 311 2.88E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_5090 50fb6903075d72cccf591553b3099d71 320 PIRSF PIRSF000723 2 313 1.5E-126 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 MC28_5090 50fb6903075d72cccf591553b3099d71 320 TIGRFAM TIGR00746 arcC: carbamate kinase 4 313 1.1E-134 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 MC28_5090 50fb6903075d72cccf591553b3099d71 320 Pfam PF00696 Amino acid kinase family 5 293 4.0E-33 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 MC28_5090 50fb6903075d72cccf591553b3099d71 320 Gene3D G3DSA:3.40.1160.10 2 313 9.8E-126 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_3575 33dacced37c6b728c2497c41b1355137 84 ProDom PD060869 YQFT IG BH1387 1 68 3.0E-31 T 14-10-2018 IPR020277 Protein of unknown function DUF2624 MC28_3575 33dacced37c6b728c2497c41b1355137 84 Pfam PF11116 Protein of unknown function (DUF2624) 1 82 5.0E-32 T 14-10-2018 IPR020277 Protein of unknown function DUF2624 MC28_0492 29b2f2bc3f6db0f15a0ba3ce37b69f22 309 Gene3D G3DSA:3.40.50.300 1 232 2.0E-62 T 14-10-2018 MC28_0492 29b2f2bc3f6db0f15a0ba3ce37b69f22 309 Pfam PF13732 Domain of unknown function (DUF4162) 212 294 1.6E-18 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 MC28_0492 29b2f2bc3f6db0f15a0ba3ce37b69f22 309 Pfam PF00005 ABC transporter 19 158 5.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0492 29b2f2bc3f6db0f15a0ba3ce37b69f22 309 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0492 29b2f2bc3f6db0f15a0ba3ce37b69f22 309 SMART SM00382 27 231 2.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0492 29b2f2bc3f6db0f15a0ba3ce37b69f22 309 SUPERFAMILY SSF52540 3 223 1.94E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3873 65b6df70a30f4d0f442e241227c529c1 177 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 45 155 1.0E-43 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame MC28_3873 65b6df70a30f4d0f442e241227c529c1 177 Pfam PF04284 Protein of unknown function (DUF441) 31 170 3.6E-48 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame MC28_3873 65b6df70a30f4d0f442e241227c529c1 177 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 27 173 19.171 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame MC28_2849 1ae2734d0caa5adf50db086e04ad5857 201 Pfam PF02397 Bacterial sugar transferase 2 176 1.0E-65 T 14-10-2018 IPR003362 Bacterial sugar transferase MC28_G013 8622be5b8419a531e69cd357439d0da9 281 Gene3D G3DSA:3.20.20.70 1 281 1.5E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_G013 8622be5b8419a531e69cd357439d0da9 281 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 280 9.8E-94 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MC28_G013 8622be5b8419a531e69cd357439d0da9 281 PIRSF PIRSF001359 1 281 4.4E-83 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MC28_G013 8622be5b8419a531e69cd357439d0da9 281 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 281 4.3E-81 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MC28_G013 8622be5b8419a531e69cd357439d0da9 281 SUPERFAMILY SSF51569 2 281 4.54E-90 T 14-10-2018 MC28_G013 8622be5b8419a531e69cd357439d0da9 281 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MC28_3930 a16df0c6ea88eafb940abfe5796a020b 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 4.8E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3930 a16df0c6ea88eafb940abfe5796a020b 218 SUPERFAMILY SSF48498 83 166 2.78E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_3930 a16df0c6ea88eafb940abfe5796a020b 218 Gene3D G3DSA:1.10.357.10 2 211 5.5E-39 T 14-10-2018 MC28_3930 a16df0c6ea88eafb940abfe5796a020b 218 SUPERFAMILY SSF46689 6 77 7.18E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3930 a16df0c6ea88eafb940abfe5796a020b 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MC28_3930 a16df0c6ea88eafb940abfe5796a020b 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 9.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3930 a16df0c6ea88eafb940abfe5796a020b 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 9.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3051 6171ec914279cffeee7c69c80f48a61e 259 Pfam PF08222 CodY helix-turn-helix domain 197 257 5.5E-39 T 14-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal MC28_3051 6171ec914279cffeee7c69c80f48a61e 259 PIRSF PIRSF011572 1 257 1.2E-122 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 MC28_3051 6171ec914279cffeee7c69c80f48a61e 259 SUPERFAMILY SSF46785 167 256 1.47E-42 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3051 6171ec914279cffeee7c69c80f48a61e 259 Pfam PF06018 CodY GAF-like domain 2 178 2.5E-81 T 14-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 MC28_3051 6171ec914279cffeee7c69c80f48a61e 259 Gene3D G3DSA:1.10.10.10 160 259 8.8E-47 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3051 6171ec914279cffeee7c69c80f48a61e 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 7.1E-124 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 MC28_3051 6171ec914279cffeee7c69c80f48a61e 259 Gene3D G3DSA:3.30.450.40 1 159 1.0E-67 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_3051 6171ec914279cffeee7c69c80f48a61e 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 149.111 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 MC28_3172 b782d7625134c6ab63bbe96d1166d838 404 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 37 369 4.9E-73 T 14-10-2018 IPR006427 Phage portal protein, HK97 MC28_3172 b782d7625134c6ab63bbe96d1166d838 404 Pfam PF04860 Phage portal protein 46 365 5.6E-75 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein MC28_1199 0a3e3e2489b5cf26bd04e6540474b074 50 Pfam PF13314 Domain of unknown function (DUF4083) 1 46 6.5E-20 T 14-10-2018 IPR025143 Protein of unknown function DUF4083 MC28_0573 f0fd961ac9c07b6181c708a06f7f7c02 238 Pfam PF13353 4Fe-4S single cluster domain 14 117 3.2E-10 T 14-10-2018 MC28_0573 f0fd961ac9c07b6181c708a06f7f7c02 238 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 235 36.184 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 MC28_0573 f0fd961ac9c07b6181c708a06f7f7c02 238 Pfam PF04055 Radical SAM superfamily 28 122 2.2E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_0573 f0fd961ac9c07b6181c708a06f7f7c02 238 SUPERFAMILY SSF102114 26 148 7.32E-14 T 14-10-2018 MC28_0573 f0fd961ac9c07b6181c708a06f7f7c02 238 PIRSF PIRSF000370 2 238 8.4E-53 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 MC28_0573 f0fd961ac9c07b6181c708a06f7f7c02 238 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 238 3.9E-120 T 14-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 MC28_0573 f0fd961ac9c07b6181c708a06f7f7c02 238 Gene3D G3DSA:3.20.20.70 4 221 1.8E-31 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0764 ec607c4b2bb7865e5a69ff1843677967 293 Gene3D G3DSA:3.30.70.120 197 272 2.7E-27 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_0764 ec607c4b2bb7865e5a69ff1843677967 293 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 225 279 2.1E-22 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_0764 ec607c4b2bb7865e5a69ff1843677967 293 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 219 2.0E-63 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_0764 ec607c4b2bb7865e5a69ff1843677967 293 PIRSF PIRSF006483 1 287 1.3E-90 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_G018 936597d992773aa039bc08cf01b65d4f 370 SUPERFAMILY SSF48452 97 291 3.62E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_G018 936597d992773aa039bc08cf01b65d4f 370 Gene3D G3DSA:1.25.40.10 6 370 9.9E-88 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1806 1c77b48234b12c2eecae05dede41a2e9 354 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 22 159 9.5E-7 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 MC28_1806 1c77b48234b12c2eecae05dede41a2e9 354 SUPERFAMILY SSF55347 168 330 1.24E-41 T 14-10-2018 MC28_1806 1c77b48234b12c2eecae05dede41a2e9 354 Pfam PF00742 Homoserine dehydrogenase 171 347 1.6E-48 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 MC28_1806 1c77b48234b12c2eecae05dede41a2e9 354 PIRSF PIRSF036497 13 354 3.3E-103 T 14-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 MC28_1806 1c77b48234b12c2eecae05dede41a2e9 354 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 214 236 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 MC28_1806 1c77b48234b12c2eecae05dede41a2e9 354 Gene3D G3DSA:3.40.50.720 19 339 6.6E-86 T 14-10-2018 MC28_1806 1c77b48234b12c2eecae05dede41a2e9 354 Gene3D G3DSA:3.30.360.10 168 331 6.6E-86 T 14-10-2018 MC28_1806 1c77b48234b12c2eecae05dede41a2e9 354 SUPERFAMILY SSF51735 16 189 3.32E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 SUPERFAMILY SSF56112 2 254 5.53E-81 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Gene3D G3DSA:3.30.10.20 351 418 3.6E-15 T 14-10-2018 MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Gene3D G3DSA:2.60.40.2560 558 639 1.1E-13 T 14-10-2018 MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Gene3D G3DSA:3.30.10.20 419 486 1.7E-7 T 14-10-2018 MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Gene3D G3DSA:3.30.10.20 492 554 8.9E-17 T 14-10-2018 MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 2 25 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 115 127 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Pfam PF00069 Protein kinase domain 2 249 6.2E-54 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Pfam PF03793 PASTA domain 493 550 2.5E-14 T 14-10-2018 IPR005543 PASTA domain MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Pfam PF03793 PASTA domain 354 416 7.0E-13 T 14-10-2018 IPR005543 PASTA domain MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Pfam PF03793 PASTA domain 423 484 1.5E-9 T 14-10-2018 IPR005543 PASTA domain MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 SMART SM00220 1 256 1.2E-60 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Gene3D G3DSA:1.10.510.10 77 264 1.5E-53 T 14-10-2018 MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 SMART SM00740 350 417 3.2E-13 T 14-10-2018 IPR005543 PASTA domain MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 SMART SM00740 488 551 3.0E-12 T 14-10-2018 IPR005543 PASTA domain MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 SMART SM00740 418 484 3.7E-4 T 14-10-2018 IPR005543 PASTA domain MC28_3085 9f279ccf0cd57ec47f2878b766b834a2 642 Gene3D G3DSA:3.30.200.20 1 75 5.6E-28 T 14-10-2018 MC28_4180 e4a4fed58ea3a1cbacf257bff2e7256f 444 PRINTS PR00758 Arsenical pump membrane protein signature 113 137 1.5E-10 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_4180 e4a4fed58ea3a1cbacf257bff2e7256f 444 PRINTS PR00758 Arsenical pump membrane protein signature 289 313 1.5E-10 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_4180 e4a4fed58ea3a1cbacf257bff2e7256f 444 PRINTS PR00758 Arsenical pump membrane protein signature 230 255 1.5E-10 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_4180 e4a4fed58ea3a1cbacf257bff2e7256f 444 PRINTS PR00758 Arsenical pump membrane protein signature 381 406 1.5E-10 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_4180 e4a4fed58ea3a1cbacf257bff2e7256f 444 Pfam PF03600 Citrate transporter 27 385 1.7E-50 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 MC28_1782 bdf05b028f6075e4dc97c1f9da7e83b2 104 SUPERFAMILY SSF49464 28 88 1.22E-6 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily MC28_4297 1fd786bb828bcb7539f26eb598d54871 216 SUPERFAMILY SSF52172 1 174 3.89E-36 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4297 1fd786bb828bcb7539f26eb598d54871 216 Pfam PF00072 Response regulator receiver domain 1 107 3.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4297 1fd786bb828bcb7539f26eb598d54871 216 Gene3D G3DSA:1.10.10.10 127 216 4.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4297 1fd786bb828bcb7539f26eb598d54871 216 Gene3D G3DSA:3.40.50.2300 1 126 4.5E-34 T 14-10-2018 MC28_4297 1fd786bb828bcb7539f26eb598d54871 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 214 7.8E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4297 1fd786bb828bcb7539f26eb598d54871 216 SMART SM00862 143 214 1.3E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4297 1fd786bb828bcb7539f26eb598d54871 216 SMART SM00448 1 107 1.7E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1772 0813900f307c149da847eebffca318bc 238 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 236 5.6E-31 T 14-10-2018 MC28_1772 0813900f307c149da847eebffca318bc 238 Gene3D G3DSA:3.40.50.720 2 237 5.0E-44 T 14-10-2018 MC28_1772 0813900f307c149da847eebffca318bc 238 SUPERFAMILY SSF51735 5 237 9.52E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1772 0813900f307c149da847eebffca318bc 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1772 0813900f307c149da847eebffca318bc 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1772 0813900f307c149da847eebffca318bc 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1772 0813900f307c149da847eebffca318bc 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1772 0813900f307c149da847eebffca318bc 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 2.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 216 257 7.9E-17 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 Gene3D G3DSA:2.40.30.10 1 98 5.4E-30 T 14-10-2018 MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 Gene3D G3DSA:2.10.240.10 216 259 1.3E-17 T 14-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 SUPERFAMILY SSF52343 95 258 7.07E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 Gene3D G3DSA:3.40.50.80 103 215 3.7E-24 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 PRINTS PR00409 Phthalate dioxygenase reductase family signature 53 67 5.3E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 PRINTS PR00409 Phthalate dioxygenase reductase family signature 112 131 5.3E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 5.3E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 4 259 38.4 T 14-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 Pfam PF00970 Oxidoreductase FAD-binding domain 8 98 1.5E-4 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 202 2.7E-4 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 SUPERFAMILY SSF63380 1 100 6.09E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel MC28_3108 29a5ed6e1ac04165639e3cda562b0092 259 PIRSF PIRSF006816 1 259 7.6E-70 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 MC28_4184 be4e567b7e7be0fe5c77398f4da2eb98 127 SUPERFAMILY SSF54637 5 125 1.11E-28 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_4184 be4e567b7e7be0fe5c77398f4da2eb98 127 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 5 120 5.4E-36 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 MC28_4184 be4e567b7e7be0fe5c77398f4da2eb98 127 Gene3D G3DSA:3.10.129.10 1 127 1.4E-51 T 14-10-2018 MC28_4184 be4e567b7e7be0fe5c77398f4da2eb98 127 Pfam PF03061 Thioesterase superfamily 35 113 3.2E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 MC28_4423 4c6dd86f650c13878b29bf58413ca142 180 Gene3D G3DSA:3.30.160.100 1 95 1.3E-34 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like MC28_4423 4c6dd86f650c13878b29bf58413ca142 180 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 121 176 8.8E-30 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal MC28_4423 4c6dd86f650c13878b29bf58413ca142 180 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 7.1E-32 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 MC28_4423 4c6dd86f650c13878b29bf58413ca142 180 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 4.4E-34 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 MC28_4423 4c6dd86f650c13878b29bf58413ca142 180 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 180 25.398 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid MC28_4423 4c6dd86f650c13878b29bf58413ca142 180 SUPERFAMILY SSF69754 2 103 1.57E-36 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like MC28_4423 4c6dd86f650c13878b29bf58413ca142 180 Gene3D G3DSA:3.30.505.50 134 180 2.5E-27 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 2.0E-49 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 PIRSF PIRSF019574 1 348 1.4E-107 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 MC28_0518 867f9196600fca833584a544da9a63d1 349 Gene3D G3DSA:3.40.190.10 32 312 1.4E-111 T 14-10-2018 MC28_0518 867f9196600fca833584a544da9a63d1 349 Gene3D G3DSA:3.40.190.10 134 341 1.4E-111 T 14-10-2018 MC28_0518 867f9196600fca833584a544da9a63d1 349 Pfam PF13416 Bacterial extracellular solute-binding protein 45 311 4.3E-43 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein MC28_0518 867f9196600fca833584a544da9a63d1 349 SUPERFAMILY SSF53850 28 345 1.92E-90 T 14-10-2018 MC28_F105 587baa977298338bf2b88b349bdb330d 181 Pfam PF13255 Protein of unknown function (DUF4046) 9 91 2.7E-6 T 14-10-2018 IPR025119 Domain of unknown function DUF4046 MC28_2841 cf313ec5dedddb0d723fe5f094bf15f2 143 Pfam PF13471 Transglutaminase-like superfamily 35 128 1.7E-19 T 14-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal MC28_4061 db274f959a2d4b98000d0f0f44e63e27 405 Gene3D G3DSA:3.30.565.10 260 405 5.8E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4061 db274f959a2d4b98000d0f0f44e63e27 405 SUPERFAMILY SSF55874 259 405 1.44E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4061 db274f959a2d4b98000d0f0f44e63e27 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 352 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4061 db274f959a2d4b98000d0f0f44e63e27 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 385 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4061 db274f959a2d4b98000d0f0f44e63e27 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 404 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4061 db274f959a2d4b98000d0f0f44e63e27 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 366 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4061 db274f959a2d4b98000d0f0f44e63e27 405 Gene3D G3DSA:1.10.287.130 182 259 2.7E-6 T 14-10-2018 MC28_4061 db274f959a2d4b98000d0f0f44e63e27 405 SMART SM00387 302 405 9.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4061 db274f959a2d4b98000d0f0f44e63e27 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 404 8.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0635 5caf22c6faa643450eb7a1cb42b1f07d 169 Pfam PF10369 Small subunit of acetolactate synthase 85 156 3.4E-26 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 MC28_0635 5caf22c6faa643450eb7a1cb42b1f07d 169 Gene3D G3DSA:3.30.70.260 1 80 1.3E-29 T 14-10-2018 MC28_0635 5caf22c6faa643450eb7a1cb42b1f07d 169 Gene3D G3DSA:3.30.70.1150 84 164 1.5E-27 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal MC28_0635 5caf22c6faa643450eb7a1cb42b1f07d 169 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 9.0E-29 T 14-10-2018 MC28_0635 5caf22c6faa643450eb7a1cb42b1f07d 169 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 2 157 4.4E-59 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 MC28_0635 5caf22c6faa643450eb7a1cb42b1f07d 169 SUPERFAMILY SSF55021 2 77 7.13E-19 T 14-10-2018 MC28_0635 5caf22c6faa643450eb7a1cb42b1f07d 169 SUPERFAMILY SSF55021 77 157 6.56E-24 T 14-10-2018 MC28_0635 5caf22c6faa643450eb7a1cb42b1f07d 169 Pfam PF01842 ACT domain 7 68 4.9E-14 T 14-10-2018 IPR002912 ACT domain MC28_0533 e6d08a4df6da3464ced753120000fc3f 473 Pfam PF13183 4Fe-4S dicluster domain 309 375 2.9E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MC28_0533 e6d08a4df6da3464ced753120000fc3f 473 Gene3D G3DSA:3.40.50.10420 131 293 2.7E-11 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily MC28_0533 e6d08a4df6da3464ced753120000fc3f 473 SUPERFAMILY SSF46548 280 391 3.49E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 MC28_0533 e6d08a4df6da3464ced753120000fc3f 473 Pfam PF02589 LUD domain 71 293 3.9E-54 T 14-10-2018 IPR003741 LUD domain MC28_0533 e6d08a4df6da3464ced753120000fc3f 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 311 322 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MC28_0533 e6d08a4df6da3464ced753120000fc3f 473 SUPERFAMILY SSF100950 64 294 3.31E-36 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_0533 e6d08a4df6da3464ced753120000fc3f 473 Pfam PF11870 Domain of unknown function (DUF3390) 383 469 5.1E-22 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal MC28_0533 e6d08a4df6da3464ced753120000fc3f 473 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 453 5.6E-206 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 MC28_0533 e6d08a4df6da3464ced753120000fc3f 473 Hamap MF_02103 Lactate utilization protein B [lutB]. 1 473 65.041 T 14-10-2018 IPR022825 Lactate utilization protein B MC28_4744 b51eed2691adc6b828f03ad0658aa7e7 481 Gene3D G3DSA:3.40.640.10 56 286 4.0E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_4744 b51eed2691adc6b828f03ad0658aa7e7 481 Gene3D G3DSA:3.90.100.10 379 480 3.0E-22 T 14-10-2018 MC28_4744 b51eed2691adc6b828f03ad0658aa7e7 481 SUPERFAMILY SSF55904 339 472 7.32E-28 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 MC28_4744 b51eed2691adc6b828f03ad0658aa7e7 481 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 405 461 1.7E-13 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 MC28_4744 b51eed2691adc6b828f03ad0658aa7e7 481 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 15 314 2.6E-79 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 MC28_4744 b51eed2691adc6b828f03ad0658aa7e7 481 Gene3D G3DSA:3.90.1150.150 287 373 4.0E-110 T 14-10-2018 MC28_4744 b51eed2691adc6b828f03ad0658aa7e7 481 SUPERFAMILY SSF53383 15 376 1.88E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0659 e148103d82cc8b10ca6309a227bad9cb 378 Pfam PF14306 PUA-like domain 21 150 3.3E-48 T 14-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 MC28_0659 e148103d82cc8b10ca6309a227bad9cb 378 Pfam PF01747 ATP-sulfurylase 159 369 7.4E-95 T 14-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 MC28_0659 e148103d82cc8b10ca6309a227bad9cb 378 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 13 369 1.7E-136 T 14-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 MC28_0659 e148103d82cc8b10ca6309a227bad9cb 378 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 17 373 50.777 T 14-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 MC28_0659 e148103d82cc8b10ca6309a227bad9cb 378 Gene3D G3DSA:3.10.400.10 18 155 1.1E-46 T 14-10-2018 MC28_0659 e148103d82cc8b10ca6309a227bad9cb 378 Gene3D G3DSA:3.40.50.620 160 371 2.9E-97 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_0659 e148103d82cc8b10ca6309a227bad9cb 378 SUPERFAMILY SSF88697 11 155 1.39E-46 T 14-10-2018 IPR015947 PUA-like superfamily MC28_0659 e148103d82cc8b10ca6309a227bad9cb 378 SUPERFAMILY SSF52374 157 369 3.75E-87 T 14-10-2018 MC28_4601 b8c69a815a1e1a257b840e7d4450c191 127 Pfam PF06486 Protein of unknown function (DUF1093) 50 114 7.6E-11 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_4601 b8c69a815a1e1a257b840e7d4450c191 127 Gene3D G3DSA:2.40.50.480 40 125 7.7E-17 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_4601 b8c69a815a1e1a257b840e7d4450c191 127 SUPERFAMILY SSF159121 46 125 2.75E-18 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_4601 b8c69a815a1e1a257b840e7d4450c191 127 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 9 123 2.5E-9 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 SUPERFAMILY SSF53092 1 136 9.42E-37 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 138 9.7E-29 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 294 306 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 Gene3D G3DSA:3.90.230.10 137 362 6.4E-84 T 14-10-2018 MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 SUPERFAMILY SSF55920 137 363 4.19E-82 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 Pfam PF00557 Metallopeptidase family M24 147 348 1.8E-65 T 14-10-2018 IPR000994 Peptidase M24 MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 Gene3D G3DSA:3.40.350.10 2 136 5.0E-42 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 218 234 8.4E-10 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 316 328 8.4E-10 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_3891 23334a2998fb1e5b157f9ceebbee0bbb 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 209 8.4E-10 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_F173 ca048b577d400a189c3f390755dbbc04 324 SUPERFAMILY SSF56601 19 324 1.15E-109 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_F173 ca048b577d400a189c3f390755dbbc04 324 Gene3D G3DSA:3.40.710.10 17 324 5.2E-107 T 14-10-2018 MC28_F173 ca048b577d400a189c3f390755dbbc04 324 Pfam PF04960 Glutaminase 38 324 5.1E-108 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 MC28_F173 ca048b577d400a189c3f390755dbbc04 324 Hamap MF_00313 Glutaminase [glsA]. 20 324 45.646 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 MC28_F173 ca048b577d400a189c3f390755dbbc04 324 TIGRFAM TIGR03814 Gln_ase: glutaminase A 24 324 5.9E-121 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 MC28_1842 d8af87d9af934ba0239fb7078df17d4a 227 Gene3D G3DSA:3.40.50.1860 103 213 7.2E-74 T 14-10-2018 MC28_1842 d8af87d9af934ba0239fb7078df17d4a 227 SUPERFAMILY SSF53681 117 226 8.5E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_1842 d8af87d9af934ba0239fb7078df17d4a 227 SUPERFAMILY SSF53681 2 113 1.72E-27 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_1842 d8af87d9af934ba0239fb7078df17d4a 227 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 191 201 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_1842 d8af87d9af934ba0239fb7078df17d4a 227 Gene3D G3DSA:3.40.50.1860 5 221 7.2E-74 T 14-10-2018 MC28_1842 d8af87d9af934ba0239fb7078df17d4a 227 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 226 9.6E-64 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 MC28_1842 d8af87d9af934ba0239fb7078df17d4a 227 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 222 3.6E-49 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_0322 fbb780dd682e10ce9272a3040c81051e 53 Pfam PF14149 YhfH-like protein 14 49 7.7E-21 T 14-10-2018 IPR025432 YhfH-like protein MC28_E135 f37d6d8ec71c6f521278fda078d02d78 292 Pfam PF12784 PD-(D/E)XK nuclease family transposase 9 245 1.8E-64 T 14-10-2018 MC28_E135 f37d6d8ec71c6f521278fda078d02d78 292 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 290 1.3E-75 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA MC28_2140 53a5a81c12ebb60b030e0cd10413b48a 366 SUPERFAMILY SSF55021 289 347 2.25E-7 T 14-10-2018 MC28_2140 53a5a81c12ebb60b030e0cd10413b48a 366 Gene3D G3DSA:1.10.3660.10 181 295 5.3E-34 T 14-10-2018 MC28_2140 53a5a81c12ebb60b030e0cd10413b48a 366 Gene3D G3DSA:3.40.50.720 1 179 8.0E-51 T 14-10-2018 MC28_2140 53a5a81c12ebb60b030e0cd10413b48a 366 Pfam PF02153 Prephenate dehydrogenase 17 273 1.0E-77 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 MC28_2140 53a5a81c12ebb60b030e0cd10413b48a 366 SUPERFAMILY SSF48179 175 283 1.7E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_2140 53a5a81c12ebb60b030e0cd10413b48a 366 SUPERFAMILY SSF51735 4 170 1.25E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1102 3c4d3476363cb35fa4c502657d77168a 371 Pfam PF09992 Phosphodiester glycosidase 159 338 6.4E-38 T 14-10-2018 IPR018711 Phosphodiester glycosidase MC28_2390 cd0c87b0139c10994144e31543e21a82 390 Gene3D G3DSA:3.40.50.720 84 276 1.7E-74 T 14-10-2018 MC28_2390 cd0c87b0139c10994144e31543e21a82 390 SUPERFAMILY SSF51735 83 273 5.92E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2390 cd0c87b0139c10994144e31543e21a82 390 Gene3D G3DSA:3.30.70.260 306 389 4.9E-20 T 14-10-2018 MC28_2390 cd0c87b0139c10994144e31543e21a82 390 Gene3D G3DSA:3.40.50.720 24 301 1.7E-74 T 14-10-2018 MC28_2390 cd0c87b0139c10994144e31543e21a82 390 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site MC28_2390 cd0c87b0139c10994144e31543e21a82 390 SUPERFAMILY SSF55021 307 389 5.12E-16 T 14-10-2018 MC28_2390 cd0c87b0139c10994144e31543e21a82 390 SUPERFAMILY SSF52283 23 105 5.29E-21 T 14-10-2018 MC28_2390 cd0c87b0139c10994144e31543e21a82 390 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 94 272 4.5E-42 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 MC28_2390 cd0c87b0139c10994144e31543e21a82 390 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 304 3.5E-19 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 MC28_2390 cd0c87b0139c10994144e31543e21a82 390 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 138 165 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 MC28_1777 53be742d5937c36e3d988774c88e6561 263 Gene3D G3DSA:3.90.1200.10 94 241 4.2E-9 T 14-10-2018 MC28_1777 53be742d5937c36e3d988774c88e6561 263 Pfam PF01636 Phosphotransferase enzyme family 45 226 1.9E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_1777 53be742d5937c36e3d988774c88e6561 263 SUPERFAMILY SSF56112 19 238 1.07E-27 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 Pfam PF03123 CAT RNA binding domain 1 55 6.1E-25 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 Gene3D G3DSA:2.30.24.10 1 55 6.1E-25 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 Pfam PF00874 PRD domain 181 273 2.7E-19 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 Pfam PF00874 PRD domain 76 163 1.1E-21 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 Gene3D G3DSA:1.10.1790.10 64 167 3.6E-36 T 14-10-2018 MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 SUPERFAMILY SSF63520 172 274 2.35E-28 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 SMART SM01061 1 59 6.7E-30 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 SUPERFAMILY SSF63520 58 166 1.2E-29 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 SUPERFAMILY SSF50151 1 53 1.23E-18 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 MC28_0201 865fae5b9385db3de332db0ed647bfc1 282 Gene3D G3DSA:1.10.1790.10 169 278 2.4E-39 T 14-10-2018 MC28_1471 2a10f04e61f2cb9a2a31f90346e15db3 87 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 1 44 3.0E-10 T 14-10-2018 IPR022453 Zinc finger, MqsA-type MC28_1471 2a10f04e61f2cb9a2a31f90346e15db3 87 TIGRFAM TIGR03829 YokU_near_AblA: uncharacterized protein, YokU family 1 87 3.3E-47 T 14-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU MC28_1471 2a10f04e61f2cb9a2a31f90346e15db3 87 Pfam PF14122 YokU-like protein, putative antitoxin 1 85 2.6E-42 T 14-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU MC28_1611 1c64c8511acfe4216f2880ddb27e71d7 465 SUPERFAMILY SSF58100 32 366 1.23E-96 T 14-10-2018 MC28_1611 1c64c8511acfe4216f2880ddb27e71d7 465 Gene3D G3DSA:1.20.1170.10 38 371 6.6E-112 T 14-10-2018 MC28_1611 1c64c8511acfe4216f2880ddb27e71d7 465 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 45 222 7.5E-58 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_2679 26a343b38738bc04d34afb34fd99f915 225 Pfam PF02308 MgtC family 12 138 6.2E-37 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_2679 26a343b38738bc04d34afb34fd99f915 225 PRINTS PR01837 MgtC/SapB protein signature 94 118 5.2E-48 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_2679 26a343b38738bc04d34afb34fd99f915 225 PRINTS PR01837 MgtC/SapB protein signature 14 33 5.2E-48 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_2679 26a343b38738bc04d34afb34fd99f915 225 PRINTS PR01837 MgtC/SapB protein signature 67 89 5.2E-48 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_2679 26a343b38738bc04d34afb34fd99f915 225 PRINTS PR01837 MgtC/SapB protein signature 33 51 5.2E-48 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_1303 259612b2957c6f7d0d8d053009924480 142 Pfam PF00583 Acetyltransferase (GNAT) family 41 132 8.9E-16 T 14-10-2018 IPR000182 GNAT domain MC28_1303 259612b2957c6f7d0d8d053009924480 142 SUPERFAMILY SSF55729 1 136 1.03E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1303 259612b2957c6f7d0d8d053009924480 142 Gene3D G3DSA:3.40.630.30 1 140 9.5E-25 T 14-10-2018 MC28_D075 a24c64d70cfad12266346de8f0911993 93 Gene3D G3DSA:1.10.10.10 2 92 9.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_D075 a24c64d70cfad12266346de8f0911993 93 Pfam PF01022 Bacterial regulatory protein, arsR family 21 61 9.0E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_D075 a24c64d70cfad12266346de8f0911993 93 SMART SM00418 14 92 3.3E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_D075 a24c64d70cfad12266346de8f0911993 93 SUPERFAMILY SSF46785 5 91 7.6E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1465 53027476d26b156fb6d6ca49dc8fb17c 232 SUPERFAMILY SSF100950 9 224 5.38E-74 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_1465 53027476d26b156fb6d6ca49dc8fb17c 232 Gene3D G3DSA:3.40.1080.10 8 224 3.0E-76 T 14-10-2018 MC28_1465 53027476d26b156fb6d6ca49dc8fb17c 232 SMART SM00882 11 222 3.2E-67 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 MC28_1465 53027476d26b156fb6d6ca49dc8fb17c 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 11 222 4.6E-61 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 MC28_1465 53027476d26b156fb6d6ca49dc8fb17c 232 Pfam PF01144 Coenzyme A transferase 13 220 1.3E-64 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 MC28_4388 99c68604b7183b3156b81f855125775d 317 Gene3D G3DSA:3.40.50.12300 3 316 6.6E-129 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily MC28_4388 99c68604b7183b3156b81f855125775d 317 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 316 5.5E-124 T 14-10-2018 IPR010119 Gluconeogenesis factor MC28_4388 99c68604b7183b3156b81f855125775d 317 Hamap MF_00973 Gluconeogenesis factor. 5 312 34.117 T 14-10-2018 IPR010119 Gluconeogenesis factor MC28_4388 99c68604b7183b3156b81f855125775d 317 SUPERFAMILY SSF142338 6 314 6.28E-107 T 14-10-2018 MC28_4388 99c68604b7183b3156b81f855125775d 317 Pfam PF01933 Uncharacterised protein family UPF0052 9 294 3.9E-104 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 MC28_3499 9a2e6c8a3269c6f497d2038658d39604 101 Gene3D G3DSA:1.10.10.10 1 101 5.4E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3499 9a2e6c8a3269c6f497d2038658d39604 101 Pfam PF03551 Transcriptional regulator PadR-like family 10 82 1.0E-21 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_3499 9a2e6c8a3269c6f497d2038658d39604 101 SUPERFAMILY SSF46785 6 99 1.51E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 306 320 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 SMART SM00437 269 549 4.1E-76 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 SUPERFAMILY SSF56712 3 597 1.01E-133 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 Gene3D G3DSA:2.70.20.10 220 480 1.3E-103 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 Gene3D G3DSA:1.10.290.10 278 407 1.3E-103 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 Pfam PF01131 DNA topoisomerase 160 584 1.0E-83 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 Gene3D G3DSA:1.10.460.10 167 594 1.3E-103 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 SMART SM00493 3 133 2.0E-21 T 14-10-2018 IPR006171 TOPRIM domain MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 Pfam PF13342 C-terminal repeat of topoisomerase 643 700 1.1E-15 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 Pfam PF13342 C-terminal repeat of topoisomerase 823 883 5.6E-15 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 Pfam PF13342 C-terminal repeat of topoisomerase 733 791 5.8E-12 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 SMART SM00436 133 226 2.6E-19 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 393 409 9.7E-17 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 512 526 9.7E-17 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 107 120 9.7E-17 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 311 320 9.7E-17 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 9.7E-17 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 Gene3D G3DSA:3.40.50.140 3 161 1.4E-37 T 14-10-2018 MC28_E171 5817b683e609623cfa6df8241bfd97b8 885 Pfam PF01751 Toprim domain 4 140 4.6E-13 T 14-10-2018 IPR006171 TOPRIM domain MC28_2939 0c9f0a99cf98d1db2781164a7e8cf03c 180 Pfam PF10628 Outer spore coat protein E (CotE) 4 175 1.1E-65 T 14-10-2018 IPR018901 Spore coat protein CotE MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 SUPERFAMILY SSF52540 2 238 6.96E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 SMART SM00382 341 512 6.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 SMART SM00382 26 229 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 Gene3D G3DSA:3.40.50.300 280 548 1.8E-63 T 14-10-2018 MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 SUPERFAMILY SSF52540 311 514 1.73E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 Pfam PF12848 ABC transporter 224 300 3.9E-17 T 14-10-2018 IPR032781 ABC-transporter extension domain MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 Pfam PF00005 ABC transporter 18 185 4.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 Gene3D G3DSA:3.40.50.300 1 279 6.2E-74 T 14-10-2018 MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 Pfam PF00005 ABC transporter 332 467 7.8E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 Pfam PF16326 ABC transporter C-terminal domain 557 622 1.3E-17 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 MC28_1375 e94d03ee4781b83562de46cef1fd130c 629 Gene3D G3DSA:1.10.287.380 549 627 1.7E-11 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 MC28_4608 789e2bf2ab630330ea30c213fcfff225 683 Gene3D G3DSA:3.40.710.10 257 663 1.1E-117 T 14-10-2018 MC28_4608 789e2bf2ab630330ea30c213fcfff225 683 Pfam PF00905 Penicillin binding protein transpeptidase domain 325 600 1.5E-34 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_4608 789e2bf2ab630330ea30c213fcfff225 683 SUPERFAMILY SSF56601 216 657 1.16E-121 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_4608 789e2bf2ab630330ea30c213fcfff225 683 SUPERFAMILY SSF53955 47 261 1.04E-74 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_4608 789e2bf2ab630330ea30c213fcfff225 683 Gene3D G3DSA:1.10.3810.10 61 256 3.6E-74 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_4608 789e2bf2ab630330ea30c213fcfff225 683 Pfam PF00912 Transglycosylase 61 234 1.6E-61 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_4608 789e2bf2ab630330ea30c213fcfff225 683 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 70 603 1.1E-183 T 14-10-2018 MC28_3035 0e9b1778c0bc52e6a626a0785950b591 118 Gene3D G3DSA:3.30.300.20 1 115 3.7E-40 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_3035 0e9b1778c0bc52e6a626a0785950b591 118 Pfam PF02033 Ribosome-binding factor A 4 107 7.4E-35 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 MC28_3035 0e9b1778c0bc52e6a626a0785950b591 118 SUPERFAMILY SSF89919 3 110 7.72E-37 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily MC28_3035 0e9b1778c0bc52e6a626a0785950b591 118 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 MC28_3035 0e9b1778c0bc52e6a626a0785950b591 118 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 107 28.169 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 MC28_3035 0e9b1778c0bc52e6a626a0785950b591 118 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 94 1.0E-42 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 MC28_3035 0e9b1778c0bc52e6a626a0785950b591 118 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 112 7.2E-44 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 MC28_4511 0b4e205f31ad1deeb56dfb4323a11d62 255 Gene3D G3DSA:3.20.20.140 1 255 2.2E-98 T 14-10-2018 MC28_4511 0b4e205f31ad1deeb56dfb4323a11d62 255 PIRSF PIRSF016557 1 255 2.7E-112 T 14-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 MC28_4511 0b4e205f31ad1deeb56dfb4323a11d62 255 SUPERFAMILY SSF89550 1 204 9.02E-16 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 MC28_4618 d56fee7d09c9224b27e0722d3718b9a8 230 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 2 104 4.0E-45 T 14-10-2018 IPR014243 Transcription factor, RsfA MC28_4618 d56fee7d09c9224b27e0722d3718b9a8 230 Pfam PF13921 Myb-like DNA-binding domain 8 57 3.1E-5 T 14-10-2018 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 Gene3D G3DSA:3.75.10.10 6 405 4.0E-162 T 14-10-2018 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 PRINTS PR01466 Bacterial arginine deiminase signature 152 170 6.2E-58 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 PRINTS PR01466 Bacterial arginine deiminase signature 180 195 6.2E-58 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 PRINTS PR01466 Bacterial arginine deiminase signature 346 363 6.2E-58 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 6.2E-58 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 PRINTS PR01466 Bacterial arginine deiminase signature 389 407 6.2E-58 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 PRINTS PR01466 Bacterial arginine deiminase signature 366 380 6.2E-58 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 TIGRFAM TIGR01078 arcA: arginine deiminase 5 410 3.4E-168 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 Hamap MF_00242 Arginine deiminase [arcA]. 2 410 48.226 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 Gene3D G3DSA:1.10.3930.10 69 152 4.0E-162 T 14-10-2018 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 SUPERFAMILY SSF55909 1 410 4.12E-136 T 14-10-2018 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 PIRSF PIRSF006356 1 410 1.5E-162 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 MC28_5087 6b4da44c8dc56fc993b12937f4aadbcb 410 Pfam PF02274 Amidinotransferase 19 407 3.8E-113 T 14-10-2018 MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 Gene3D G3DSA:3.30.70.250 1 84 5.8E-38 T 14-10-2018 MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 200 3.0E-9 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 1.1E-117 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 3.2E-10 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 119 2.5E-5 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 Gene3D G3DSA:2.160.10.10 85 236 2.6E-52 T 14-10-2018 MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 SUPERFAMILY SSF51161 88 226 1.19E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 46.603 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 2.6E-36 T 14-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 MC28_3270 3f006bda5499e9c09baf4d8163d2d7a9 240 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 MC28_4810 9e299fbc7eb842805d36084a114d1cc2 245 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 18 243 1.7E-106 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 MC28_4810 9e299fbc7eb842805d36084a114d1cc2 245 PIRSF PIRSF002155 16 242 7.4E-83 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4810 9e299fbc7eb842805d36084a114d1cc2 245 Pfam PF00687 Ribosomal protein L1p/L10e family 46 235 5.0E-56 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein MC28_4810 9e299fbc7eb842805d36084a114d1cc2 245 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 17 244 44.619 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 MC28_4810 9e299fbc7eb842805d36084a114d1cc2 245 SUPERFAMILY SSF56808 21 241 7.06E-85 T 14-10-2018 IPR023674 Ribosomal protein L1-like MC28_4810 9e299fbc7eb842805d36084a114d1cc2 245 ProSitePatterns PS01199 Ribosomal protein L1 signature. 136 154 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4810 9e299fbc7eb842805d36084a114d1cc2 245 Gene3D G3DSA:3.40.50.790 83 174 1.9E-85 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich MC28_4810 9e299fbc7eb842805d36084a114d1cc2 245 Gene3D G3DSA:3.30.190.20 36 240 1.9E-85 T 14-10-2018 MC28_4154 63fb46be66cd6672d7c9475cb7f35b48 480 Gene3D G3DSA:3.40.50.2000 254 462 9.3E-185 T 14-10-2018 MC28_4154 63fb46be66cd6672d7c9475cb7f35b48 480 SUPERFAMILY SSF53756 6 480 2.86E-134 T 14-10-2018 MC28_4154 63fb46be66cd6672d7c9475cb7f35b48 480 Pfam PF00534 Glycosyl transferases group 1 291 441 1.0E-19 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_4154 63fb46be66cd6672d7c9475cb7f35b48 480 Pfam PF08323 Starch synthase catalytic domain 6 241 8.4E-83 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 MC28_4154 63fb46be66cd6672d7c9475cb7f35b48 480 Gene3D G3DSA:3.40.50.2000 7 476 9.3E-185 T 14-10-2018 MC28_4154 63fb46be66cd6672d7c9475cb7f35b48 480 Hamap MF_00484 Glycogen synthase [glgA]. 5 478 46.805 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 MC28_4154 63fb46be66cd6672d7c9475cb7f35b48 480 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 6 478 7.6E-179 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 MC28_0678 a8e3d6307286f86e96bf796df2e337cd 464 Pfam PF05525 Branched-chain amino acid transport protein 16 445 1.2E-155 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_0678 a8e3d6307286f86e96bf796df2e337cd 464 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 23 432 1.0E-140 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_G411 e18dfed6055cb08469e6279f108f509e 369 Gene3D G3DSA:1.10.443.10 172 368 7.3E-53 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_G411 e18dfed6055cb08469e6279f108f509e 369 Gene3D G3DSA:1.10.150.130 58 171 2.0E-27 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_G411 e18dfed6055cb08469e6279f108f509e 369 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 65 119 2.2E-14 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_G411 e18dfed6055cb08469e6279f108f509e 369 Pfam PF14657 Arm DNA-binding domain 12 52 6.3E-13 T 14-10-2018 IPR028259 AP2-like integrase, N-terminal domain MC28_G411 e18dfed6055cb08469e6279f108f509e 369 Pfam PF00589 Phage integrase family 175 353 6.8E-27 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_G411 e18dfed6055cb08469e6279f108f509e 369 SUPERFAMILY SSF56349 64 362 5.3E-68 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_F189 2ea24e4ac2e7784ee80dc8c5b42ae80f 347 Gene3D G3DSA:3.30.1360.120 3 337 6.3E-52 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MC28_F189 2ea24e4ac2e7784ee80dc8c5b42ae80f 347 PIRSF PIRSF006487 1 345 2.2E-45 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 MC28_F189 2ea24e4ac2e7784ee80dc8c5b42ae80f 347 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 235 9.4E-34 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain MC28_F189 2ea24e4ac2e7784ee80dc8c5b42ae80f 347 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 242 322 3.5E-10 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 MC28_F189 2ea24e4ac2e7784ee80dc8c5b42ae80f 347 SUPERFAMILY SSF103025 14 257 1.57E-46 T 14-10-2018 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 7.6E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 7.6E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 Gene3D G3DSA:1.10.8.60 319 385 4.7E-21 T 14-10-2018 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 SUPERFAMILY SSF55785 9 121 7.67E-6 T 14-10-2018 IPR035965 PAS domain superfamily MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 Gene3D G3DSA:3.30.450.20 5 125 2.0E-7 T 14-10-2018 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 Pfam PF00158 Sigma-54 interaction domain 149 314 2.4E-62 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 8.8E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 Gene3D G3DSA:3.40.50.300 135 318 7.2E-59 T 14-10-2018 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 SMART SM00382 169 311 8.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 SUPERFAMILY SSF52540 148 389 2.62E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 SUPERFAMILY SSF46689 361 465 2.9E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 173 186 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_5217 4940d7256dbf0009fd69f8df4d779265 467 Gene3D G3DSA:1.10.10.60 388 467 1.2E-18 T 14-10-2018 MC28_1655 3ea30670e4d938eca4ecdb91fd6352ec 457 TIGRFAM TIGR03720 exospor_lead: exosporium leader peptide 6 24 1.0E-6 T 14-10-2018 IPR021201 Leader peptide, exosporium MC28_1655 3ea30670e4d938eca4ecdb91fd6352ec 457 Pfam PF01391 Collagen triple helix repeat (20 copies) 25 81 7.7E-9 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_1655 3ea30670e4d938eca4ecdb91fd6352ec 457 PRINTS PR01035 Tetracycline resistance protein signature 94 115 9.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1655 3ea30670e4d938eca4ecdb91fd6352ec 457 PRINTS PR01035 Tetracycline resistance protein signature 6 22 9.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1655 3ea30670e4d938eca4ecdb91fd6352ec 457 PRINTS PR01035 Tetracycline resistance protein signature 305 328 9.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1655 3ea30670e4d938eca4ecdb91fd6352ec 457 Pfam PF13799 Domain of unknown function (DUF4183) 384 453 3.0E-20 T 14-10-2018 IPR025237 Domain of unknown function DUF4183 MC28_G136 1f768eac748c063ac1e236240336434b 95 SUPERFAMILY SSF52540 1 61 1.64E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G136 1f768eac748c063ac1e236240336434b 95 Gene3D G3DSA:3.40.50.300 1 76 1.5E-13 T 14-10-2018 MC28_1993 aab46c0dd5e8e1736c1f01c93d257eee 121 Gene3D G3DSA:3.90.1150.30 3 121 8.9E-41 T 14-10-2018 IPR038056 YjbR-like superfamily MC28_1993 aab46c0dd5e8e1736c1f01c93d257eee 121 SUPERFAMILY SSF142906 5 119 3.27E-38 T 14-10-2018 IPR038056 YjbR-like superfamily MC28_1993 aab46c0dd5e8e1736c1f01c93d257eee 121 Pfam PF04237 YjbR 13 106 2.7E-24 T 14-10-2018 IPR007351 Uncharacterised protein YjbR MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 SMART SM00387 370 481 7.1E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 324 1.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 1.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 1.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 1.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 1.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 Gene3D G3DSA:1.20.1480.50 171 263 5.0E-11 T 14-10-2018 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 SMART SM00304 206 258 4.3E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 Gene3D G3DSA:1.10.287.130 264 321 4.0E-14 T 14-10-2018 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 Gene3D G3DSA:3.30.565.10 328 481 1.8E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 SMART SM00388 259 325 1.9E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 480 3.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 SUPERFAMILY SSF55874 315 480 5.63E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 SUPERFAMILY SSF158472 206 254 1.96E-6 T 14-10-2018 MC28_5307 638aaaecf710c2e0dce0b54d530b60d9 481 SUPERFAMILY SSF47384 243 326 4.51E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_3267 6d65adb838b2a2be4ddf7479f7ef0a53 221 SUPERFAMILY SSF116726 135 220 2.62E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_3267 6d65adb838b2a2be4ddf7479f7ef0a53 221 Gene3D G3DSA:3.30.70.1450 141 218 3.3E-28 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_3267 6d65adb838b2a2be4ddf7479f7ef0a53 221 Pfam PF02080 TrkA-C domain 153 219 2.3E-17 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 MC28_3267 6d65adb838b2a2be4ddf7479f7ef0a53 221 Gene3D G3DSA:3.40.50.720 2 140 1.1E-38 T 14-10-2018 MC28_3267 6d65adb838b2a2be4ddf7479f7ef0a53 221 Pfam PF02254 TrkA-N domain 8 123 1.2E-29 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 MC28_3267 6d65adb838b2a2be4ddf7479f7ef0a53 221 SUPERFAMILY SSF51735 7 137 1.64E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2351 3f89dc0dbdbb75f3177a61cc8697c3a9 139 SUPERFAMILY SSF46785 7 136 5.29E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2351 3f89dc0dbdbb75f3177a61cc8697c3a9 139 Pfam PF01047 MarR family 32 88 4.4E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2351 3f89dc0dbdbb75f3177a61cc8697c3a9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.5E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2351 3f89dc0dbdbb75f3177a61cc8697c3a9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.5E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2351 3f89dc0dbdbb75f3177a61cc8697c3a9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.5E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2351 3f89dc0dbdbb75f3177a61cc8697c3a9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.5E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2351 3f89dc0dbdbb75f3177a61cc8697c3a9 139 SMART SM00347 24 124 1.8E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2351 3f89dc0dbdbb75f3177a61cc8697c3a9 139 Gene3D G3DSA:1.10.10.10 2 135 4.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4536 bf8651270b21fd896ff58c5b5270a977 172 SUPERFAMILY SSF56770 18 163 5.1E-67 T 14-10-2018 MC28_4536 bf8651270b21fd896ff58c5b5270a977 172 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 20 161 7.4E-73 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4536 bf8651270b21fd896ff58c5b5270a977 172 Gene3D G3DSA:3.40.50.12280 6 172 1.1E-77 T 14-10-2018 MC28_4536 bf8651270b21fd896ff58c5b5270a977 172 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 10 160 43.172 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4536 bf8651270b21fd896ff58c5b5270a977 172 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 46 155 3.4E-26 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4203 429ce7af60d4ae4016cb42a8d5494e83 121 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 6 110 4.6E-35 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 MC28_4203 429ce7af60d4ae4016cb42a8d5494e83 121 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 106 1.8E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 MC28_4203 429ce7af60d4ae4016cb42a8d5494e83 121 SUPERFAMILY SSF89360 5 99 1.04E-26 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 MC28_4203 429ce7af60d4ae4016cb42a8d5494e83 121 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 92 109 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 MC28_4203 429ce7af60d4ae4016cb42a8d5494e83 121 Gene3D G3DSA:2.60.300.12 5 113 2.7E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 MC28_3143 8ec6906faa2abdefdb3ec192564ed9b7 157 Gene3D G3DSA:3.40.630.30 2 157 5.1E-47 T 14-10-2018 MC28_3143 8ec6906faa2abdefdb3ec192564ed9b7 157 PIRSF PIRSF037732 1 157 2.8E-77 T 14-10-2018 IPR017274 Putative N-acetyltransferase YlbP MC28_3143 8ec6906faa2abdefdb3ec192564ed9b7 157 Hamap MF_00824 Uncharacterized N-acetyltransferase . 3 144 37.769 T 14-10-2018 IPR017274 Putative N-acetyltransferase YlbP MC28_3143 8ec6906faa2abdefdb3ec192564ed9b7 157 SUPERFAMILY SSF55729 25 136 1.43E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3143 8ec6906faa2abdefdb3ec192564ed9b7 157 Pfam PF00583 Acetyltransferase (GNAT) family 37 107 1.3E-5 T 14-10-2018 IPR000182 GNAT domain MC28_2127 036a0df62c7cb815c7e2584cf5b56a54 242 SMART SM00849 43 213 3.4E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2127 036a0df62c7cb815c7e2584cf5b56a54 242 Pfam PF00753 Metallo-beta-lactamase superfamily 44 182 2.9E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2127 036a0df62c7cb815c7e2584cf5b56a54 242 SUPERFAMILY SSF56281 27 220 2.62E-25 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_2127 036a0df62c7cb815c7e2584cf5b56a54 242 Gene3D G3DSA:3.60.15.10 9 240 1.6E-10 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_0555 27aa9070161663864e8600d47fa5fad6 364 Pfam PF00266 Aminotransferase class-V 34 330 3.3E-28 T 14-10-2018 IPR000192 Aminotransferase class V domain MC28_0555 27aa9070161663864e8600d47fa5fad6 364 Gene3D G3DSA:3.90.1150.10 9 352 2.0E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_0555 27aa9070161663864e8600d47fa5fad6 364 Gene3D G3DSA:3.40.640.10 17 263 2.0E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_0555 27aa9070161663864e8600d47fa5fad6 364 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 364 200.84 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 MC28_0555 27aa9070161663864e8600d47fa5fad6 364 PIRSF PIRSF000524 1 362 4.0E-57 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 MC28_0555 27aa9070161663864e8600d47fa5fad6 364 SUPERFAMILY SSF53383 4 359 7.22E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0555 27aa9070161663864e8600d47fa5fad6 364 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 7 358 2.4E-152 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 MC28_0555 27aa9070161663864e8600d47fa5fad6 364 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 4 362 1.0E-197 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 MC28_2743 49d184b9e45e486c53e2774d25d89203 297 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2743 49d184b9e45e486c53e2774d25d89203 297 SMART SM00382 26 204 1.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2743 49d184b9e45e486c53e2774d25d89203 297 Pfam PF00005 ABC transporter 19 156 6.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2743 49d184b9e45e486c53e2774d25d89203 297 SUPERFAMILY SSF52540 2 215 5.33E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2743 49d184b9e45e486c53e2774d25d89203 297 Gene3D G3DSA:3.40.50.300 1 231 2.3E-53 T 14-10-2018 MC28_0546 bedbb1cd0951bfc41449deb3dd685f5d 361 Pfam PF00561 alpha/beta hydrolase fold 71 338 1.2E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_0546 bedbb1cd0951bfc41449deb3dd685f5d 361 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 9 359 5.0E-137 T 14-10-2018 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 MC28_0546 bedbb1cd0951bfc41449deb3dd685f5d 361 SUPERFAMILY SSF53474 56 357 6.25E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0546 bedbb1cd0951bfc41449deb3dd685f5d 361 Gene3D G3DSA:3.40.50.1820 260 360 1.4E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0546 bedbb1cd0951bfc41449deb3dd685f5d 361 Gene3D G3DSA:3.40.50.1820 52 253 3.3E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2129 5f1c1ab245462c45ee24494eca327d16 269 Pfam PF01522 Polysaccharide deacetylase 62 169 3.2E-27 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_2129 5f1c1ab245462c45ee24494eca327d16 269 SUPERFAMILY SSF88713 59 258 1.36E-52 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_2129 5f1c1ab245462c45ee24494eca327d16 269 Gene3D G3DSA:3.20.20.370 26 259 8.0E-63 T 14-10-2018 MC28_4928 c7e566373afcf17c3e94c50f657d640a 39 Pfam PF13134 Protein of unknown function (DUF3948) 4 38 3.5E-22 T 14-10-2018 IPR025034 Protein of unknown function DUF3948 MC28_0994 89477123f12a7ec750763fabf482a0b4 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site MC28_0994 89477123f12a7ec750763fabf482a0b4 165 SMART SM00347 35 138 4.6E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0994 89477123f12a7ec750763fabf482a0b4 165 SUPERFAMILY SSF46785 17 157 8.65E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0994 89477123f12a7ec750763fabf482a0b4 165 Gene3D G3DSA:1.10.10.10 8 155 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0994 89477123f12a7ec750763fabf482a0b4 165 Pfam PF01047 MarR family 43 100 1.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 SMART SM00421 149 206 1.7E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 205 2.4E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 SUPERFAMILY SSF52172 1 131 1.31E-32 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 Pfam PF00072 Response regulator receiver domain 5 116 5.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 SMART SM00448 3 115 9.2E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 SUPERFAMILY SSF46894 150 207 8.5E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_0982 dd1e7a5915ca58f1bdb4fabd93136b4c 212 Gene3D G3DSA:3.40.50.12740 3 211 4.7E-61 T 14-10-2018 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 30 144 1.5E-34 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 SMART SM00859 29 145 3.6E-40 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 Gene3D G3DSA:3.40.50.720 30 361 1.9E-137 T 14-10-2018 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 29 365 6.9E-145 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 SUPERFAMILY SSF51735 28 180 1.0E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 Gene3D G3DSA:3.30.360.10 152 347 1.9E-137 T 14-10-2018 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 27 364 36.623 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 PIRSF PIRSF000148 27 369 8.8E-124 T 14-10-2018 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 SUPERFAMILY SSF55347 153 351 1.23E-71 T 14-10-2018 MC28_1644 9a03473c43c18c8c9acfa83a068a5335 369 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 350 2.3E-55 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 MC28_2293 f38b424cab2eb3f5f1eadff5f0f5bdf6 421 SUPERFAMILY SSF56672 10 249 3.29E-51 T 14-10-2018 MC28_2293 f38b424cab2eb3f5f1eadff5f0f5bdf6 421 Gene3D G3DSA:3.30.1490.100 267 367 8.7E-9 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_2293 f38b424cab2eb3f5f1eadff5f0f5bdf6 421 Gene3D G3DSA:3.30.70.270 12 246 1.7E-45 T 14-10-2018 MC28_2293 f38b424cab2eb3f5f1eadff5f0f5bdf6 421 Gene3D G3DSA:1.10.150.20 190 243 1.7E-45 T 14-10-2018 MC28_2293 f38b424cab2eb3f5f1eadff5f0f5bdf6 421 Pfam PF11798 IMS family HHH motif 181 213 8.6E-7 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 MC28_2293 f38b424cab2eb3f5f1eadff5f0f5bdf6 421 Pfam PF00817 impB/mucB/samB family 15 165 1.6E-27 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_2293 f38b424cab2eb3f5f1eadff5f0f5bdf6 421 SUPERFAMILY SSF100879 261 357 4.91E-10 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_2293 f38b424cab2eb3f5f1eadff5f0f5bdf6 421 Pfam PF11799 impB/mucB/samB family C-terminal domain 254 364 1.3E-13 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_2293 f38b424cab2eb3f5f1eadff5f0f5bdf6 421 Gene3D G3DSA:2.30.40.20 29 82 1.7E-45 T 14-10-2018 MC28_0529 2d536d4504ae69fd39aa384c5152d375 223 Gene3D G3DSA:1.10.10.10 129 223 1.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0529 2d536d4504ae69fd39aa384c5152d375 223 Pfam PF00072 Response regulator receiver domain 6 114 2.0E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0529 2d536d4504ae69fd39aa384c5152d375 223 SMART SM00448 4 114 1.6E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0529 2d536d4504ae69fd39aa384c5152d375 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 1.7E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_0529 2d536d4504ae69fd39aa384c5152d375 223 SUPERFAMILY SSF52172 1 180 1.21E-46 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0529 2d536d4504ae69fd39aa384c5152d375 223 SMART SM00862 148 221 3.5E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_0529 2d536d4504ae69fd39aa384c5152d375 223 Gene3D G3DSA:3.40.50.2300 1 128 1.8E-44 T 14-10-2018 MC28_2236 38f6a2f66c85c3e9fafd70d49d878ff5 150 Pfam PF00293 NUDIX domain 39 134 3.2E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_2236 38f6a2f66c85c3e9fafd70d49d878ff5 150 Gene3D G3DSA:3.90.79.10 3 145 4.0E-30 T 14-10-2018 MC28_2236 38f6a2f66c85c3e9fafd70d49d878ff5 150 SUPERFAMILY SSF55811 7 143 1.03E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_2236 38f6a2f66c85c3e9fafd70d49d878ff5 150 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_0024 1ae2ded589072afe9763d8027f803aaa 284 Gene3D G3DSA:3.40.1090.10 54 277 4.9E-11 T 14-10-2018 MC28_0024 1ae2ded589072afe9763d8027f803aaa 284 Gene3D G3DSA:3.40.1090.10 3 53 1.5E-11 T 14-10-2018 MC28_0024 1ae2ded589072afe9763d8027f803aaa 284 SUPERFAMILY SSF52151 5 275 2.09E-45 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MC28_0024 1ae2ded589072afe9763d8027f803aaa 284 Pfam PF01734 Patatin-like phospholipase 7 171 3.2E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 MC28_1788 82353cebae3f7d431d9dd64e99e8e124 233 Pfam PF13649 Methyltransferase domain 53 154 6.8E-12 T 14-10-2018 MC28_1788 82353cebae3f7d431d9dd64e99e8e124 233 SUPERFAMILY SSF53335 22 203 9.83E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1788 82353cebae3f7d431d9dd64e99e8e124 233 Gene3D G3DSA:3.40.50.150 17 232 5.8E-21 T 14-10-2018 MC28_4707 134564c9a03273accce407c21bf6efc3 366 Gene3D G3DSA:3.10.20.30 48 364 9.3E-159 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_4707 134564c9a03273accce407c21bf6efc3 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_4707 134564c9a03273accce407c21bf6efc3 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_4707 134564c9a03273accce407c21bf6efc3 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_4707 134564c9a03273accce407c21bf6efc3 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_4707 134564c9a03273accce407c21bf6efc3 366 PIRSF PIRSF006641 1 366 7.3E-167 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 MC28_4707 134564c9a03273accce407c21bf6efc3 366 Pfam PF01926 50S ribosome-binding GTPase 5 123 9.7E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_4707 134564c9a03273accce407c21bf6efc3 366 SUPERFAMILY SSF52540 3 304 2.83E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4707 134564c9a03273accce407c21bf6efc3 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 7.9E-161 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 MC28_4707 134564c9a03273accce407c21bf6efc3 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 8.7E-41 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 MC28_4707 134564c9a03273accce407c21bf6efc3 366 Gene3D G3DSA:3.40.50.300 4 281 9.3E-159 T 14-10-2018 MC28_4707 134564c9a03273accce407c21bf6efc3 366 Gene3D G3DSA:1.10.150.300 113 200 9.3E-159 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 MC28_4707 134564c9a03273accce407c21bf6efc3 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 46.261 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 MC28_4707 134564c9a03273accce407c21bf6efc3 366 SUPERFAMILY SSF81271 282 363 6.1E-37 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 PIRSF PIRSF006205 2 385 1.9E-161 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 5.8E-39 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 Gene3D G3DSA:1.10.1740.10 300 385 1.2E-29 T 14-10-2018 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 SUPERFAMILY SSF69055 289 381 1.96E-32 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 130 1.0E-42 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 SUPERFAMILY SSF55347 124 262 1.24E-57 T 14-10-2018 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 SUPERFAMILY SSF51735 3 148 3.24E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2487 9622f453420376d1b6ed72d665de2a53 385 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 375 1.4E-40 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 380 7.6E-158 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 380 46.52 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 MC28_2487 9622f453420376d1b6ed72d665de2a53 385 Gene3D G3DSA:3.40.50.720 1 148 1.7E-49 T 14-10-2018 MC28_3488 2f5e17669f94a45433bac09bfb73ea8c 192 SUPERFAMILY SSF55729 3 138 3.51E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3488 2f5e17669f94a45433bac09bfb73ea8c 192 Gene3D G3DSA:3.40.630.30 1 160 6.4E-24 T 14-10-2018 MC28_3488 2f5e17669f94a45433bac09bfb73ea8c 192 Pfam PF13302 Acetyltransferase (GNAT) domain 4 138 6.0E-15 T 14-10-2018 IPR000182 GNAT domain MC28_2107 ed459a24e47a8055c767c7ec108f01e6 260 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2107 ed459a24e47a8055c767c7ec108f01e6 260 SUPERFAMILY SSF52540 12 243 2.13E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2107 ed459a24e47a8055c767c7ec108f01e6 260 Gene3D G3DSA:3.40.50.300 10 250 2.3E-63 T 14-10-2018 MC28_2107 ed459a24e47a8055c767c7ec108f01e6 260 Pfam PF00005 ABC transporter 31 167 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2107 ed459a24e47a8055c767c7ec108f01e6 260 SMART SM00382 40 217 1.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 7 552 2.3E-224 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 866 16.052 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 SUPERFAMILY SSF50677 182 333 7.85E-65 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 Pfam PF08264 Anticodon-binding domain of tRNA 595 741 1.7E-45 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 Gene3D G3DSA:3.90.740.10 167 333 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 SUPERFAMILY SSF46589 801 865 3.92E-17 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 Gene3D G3DSA:1.10.287.380 794 866 1.4E-23 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 PRINTS PR00986 Valyl-tRNA synthetase signature 464 482 2.1E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 PRINTS PR00986 Valyl-tRNA synthetase signature 28 39 2.1E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 PRINTS PR00986 Valyl-tRNA synthetase signature 222 239 2.1E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 PRINTS PR00986 Valyl-tRNA synthetase signature 432 453 2.1E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 PRINTS PR00986 Valyl-tRNA synthetase signature 337 350 2.1E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 SUPERFAMILY SSF52374 3 562 3.52E-142 T 14-10-2018 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 Gene3D G3DSA:3.40.50.620 14 513 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 35 46 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 SUPERFAMILY SSF47323 563 815 4.49E-79 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 TIGRFAM TIGR00422 valS: valine--tRNA ligase 2 848 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 801 865 1.6E-25 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 MC28_3750 e371f5f00791230c326a3f0ef4e34d3c 867 Gene3D G3DSA:1.10.730.10 2 729 0.0 T 14-10-2018 MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Gene3D G3DSA:2.10.270.10 414 489 5.5E-19 T 14-10-2018 MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 261 279 6.1E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 321 339 0.0023 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 282 299 2.7E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 449 458 0.45 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 201 217 7.3E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 301 319 3.1E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 221 239 1.0E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 388 405 8.1E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 241 259 6.4E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 429 445 0.11 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Pfam PF01473 Putative cell wall binding repeat 368 385 0.13 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Gene3D G3DSA:2.10.270.10 271 310 2.9E-15 T 14-10-2018 MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 SUPERFAMILY SSF69360 368 486 3.14E-34 T 14-10-2018 MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Gene3D G3DSA:2.20.120.10 175 217 3.4E-6 T 14-10-2018 MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Gene3D G3DSA:2.10.270.10 218 270 1.2E-20 T 14-10-2018 MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Gene3D G3DSA:2.10.270.10 311 364 5.6E-15 T 14-10-2018 MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 Gene3D G3DSA:2.10.270.10 365 413 7.7E-11 T 14-10-2018 MC28_0469 c5a14f2a22e53c99913bdce0754b2cff 489 SUPERFAMILY SSF69360 176 363 7.46E-65 T 14-10-2018 MC28_4897 21b0dce7903fb555b553169301cabeb7 267 SUPERFAMILY SSF51735 6 158 2.08E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4897 21b0dce7903fb555b553169301cabeb7 267 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 265 5.1E-30 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_4897 21b0dce7903fb555b553169301cabeb7 267 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 267 21.758 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_4897 21b0dce7903fb555b553169301cabeb7 267 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 101 9.5E-18 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal MC28_4897 21b0dce7903fb555b553169301cabeb7 267 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 265 6.1E-66 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_4897 21b0dce7903fb555b553169301cabeb7 267 SUPERFAMILY SSF48179 164 265 7.65E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_4897 21b0dce7903fb555b553169301cabeb7 267 PIRSF PIRSF000193 4 267 9.9E-67 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_4897 21b0dce7903fb555b553169301cabeb7 267 Gene3D G3DSA:3.40.50.720 3 165 1.3E-37 T 14-10-2018 MC28_4897 21b0dce7903fb555b553169301cabeb7 267 Gene3D G3DSA:1.10.3730.10 166 267 1.5E-29 T 14-10-2018 MC28_0721 b9a6ab6fe82ba39b28708c02f8225242 163 Pfam PF01476 LysM domain 108 153 2.7E-11 T 14-10-2018 IPR018392 LysM domain MC28_0721 b9a6ab6fe82ba39b28708c02f8225242 163 SUPERFAMILY SSF54106 106 153 2.35E-8 T 14-10-2018 MC28_0721 b9a6ab6fe82ba39b28708c02f8225242 163 SMART SM00257 107 153 9.9E-12 T 14-10-2018 IPR018392 LysM domain MC28_0721 b9a6ab6fe82ba39b28708c02f8225242 163 Gene3D G3DSA:3.10.350.10 92 163 9.0E-17 T 14-10-2018 IPR036779 LysM domain superfamily MC28_5274 cbc415edd1fcc72e43515093c9e8a042 391 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 10 382 5.3E-182 T 14-10-2018 IPR014230 Sporulation protein YhbH MC28_5274 cbc415edd1fcc72e43515093c9e8a042 391 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 7 387 31.439 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 MC28_5274 cbc415edd1fcc72e43515093c9e8a042 391 Pfam PF04285 Protein of unknown function (DUF444) 192 385 1.9E-68 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 MC28_5274 cbc415edd1fcc72e43515093c9e8a042 391 Pfam PF04285 Protein of unknown function (DUF444) 11 186 1.3E-34 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 MC28_1610 28d6a7bb9cef08d187bee4185c8a37eb 380 Gene3D G3DSA:1.20.1170.10 44 380 2.8E-132 T 14-10-2018 MC28_1610 28d6a7bb9cef08d187bee4185c8a37eb 380 SUPERFAMILY SSF58100 38 374 3.14E-103 T 14-10-2018 MC28_1610 28d6a7bb9cef08d187bee4185c8a37eb 380 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 51 228 2.9E-60 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_2982 9a270d1eda43440ca2ec1a882378f7b8 354 Gene3D G3DSA:2.30.30.40 221 278 4.6E-7 T 14-10-2018 MC28_2982 9a270d1eda43440ca2ec1a882378f7b8 354 SMART SM00644 34 168 1.9E-22 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_2982 9a270d1eda43440ca2ec1a882378f7b8 354 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 49 167 5.6E-12 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_2982 9a270d1eda43440ca2ec1a882378f7b8 354 SUPERFAMILY SSF55846 34 186 1.55E-32 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_2982 9a270d1eda43440ca2ec1a882378f7b8 354 Gene3D G3DSA:3.40.80.10 18 200 5.9E-54 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_3377 cf6cf429577a30f90c85ae9cacfc2202 320 Gene3D G3DSA:1.20.58.340 130 241 2.4E-26 T 14-10-2018 MC28_3377 cf6cf429577a30f90c85ae9cacfc2202 320 Pfam PF01544 CorA-like Mg2+ transporter protein 33 315 1.4E-73 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 MC28_3377 cf6cf429577a30f90c85ae9cacfc2202 320 SUPERFAMILY SSF143865 5 253 5.36E-58 T 14-10-2018 MC28_3377 cf6cf429577a30f90c85ae9cacfc2202 320 Gene3D G3DSA:3.30.460.20 6 129 2.3E-27 T 14-10-2018 MC28_3377 cf6cf429577a30f90c85ae9cacfc2202 320 SUPERFAMILY SSF144083 255 316 4.32E-21 T 14-10-2018 MC28_3377 cf6cf429577a30f90c85ae9cacfc2202 320 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 15 319 5.2E-88 T 14-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 MC28_3377 cf6cf429577a30f90c85ae9cacfc2202 320 Gene3D G3DSA:1.20.58.340 243 319 2.5E-30 T 14-10-2018 MC28_4168 036485176ffe6ec384e8eb9873c42494 119 PRINTS PR00681 Ribosomal protein S1 signature 26 45 7.2E-12 T 14-10-2018 MC28_4168 036485176ffe6ec384e8eb9873c42494 119 PRINTS PR00681 Ribosomal protein S1 signature 65 83 7.2E-12 T 14-10-2018 MC28_4168 036485176ffe6ec384e8eb9873c42494 119 SUPERFAMILY SSF50249 8 92 5.52E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4168 036485176ffe6ec384e8eb9873c42494 119 SMART SM00316 11 82 3.4E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_4168 036485176ffe6ec384e8eb9873c42494 119 Pfam PF00575 S1 RNA binding domain 12 82 3.3E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 MC28_4168 036485176ffe6ec384e8eb9873c42494 119 Gene3D G3DSA:2.40.50.140 7 90 5.5E-31 T 14-10-2018 MC28_3847 76a2402da2618f07838cd5fb07ec2923 599 Pfam PF07690 Major Facilitator Superfamily 103 494 3.2E-52 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_3847 76a2402da2618f07838cd5fb07ec2923 599 Gene3D G3DSA:1.20.1720.10 99 303 9.2E-43 T 14-10-2018 MC28_3847 76a2402da2618f07838cd5fb07ec2923 599 PRINTS PR01036 Tetracycline resistance protein TetB signature 387 411 9.6E-12 T 14-10-2018 MC28_3847 76a2402da2618f07838cd5fb07ec2923 599 PRINTS PR01036 Tetracycline resistance protein TetB signature 102 126 9.6E-12 T 14-10-2018 MC28_3847 76a2402da2618f07838cd5fb07ec2923 599 PRINTS PR01036 Tetracycline resistance protein TetB signature 193 213 9.6E-12 T 14-10-2018 MC28_3847 76a2402da2618f07838cd5fb07ec2923 599 PRINTS PR01036 Tetracycline resistance protein TetB signature 223 247 9.6E-12 T 14-10-2018 MC28_3847 76a2402da2618f07838cd5fb07ec2923 599 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 100 587 1.4E-137 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 MC28_3847 76a2402da2618f07838cd5fb07ec2923 599 SUPERFAMILY SSF103473 93 593 2.88E-66 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_3847 76a2402da2618f07838cd5fb07ec2923 599 Gene3D G3DSA:1.20.1250.20 340 520 3.6E-17 T 14-10-2018 MC28_4337 c58beece270179983698ae1489e28f3d 134 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 121 19.228 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MC28_4337 c58beece270179983698ae1489e28f3d 134 TIGRFAM TIGR00494 crcB: protein CrcB 5 119 3.3E-27 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MC28_4337 c58beece270179983698ae1489e28f3d 134 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 116 2.9E-24 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MC28_D163 f93d9042c3a3d3da2adbb562ff3f56c1 211 Pfam PF13411 MerR HTH family regulatory protein 8 78 2.8E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_D163 f93d9042c3a3d3da2adbb562ff3f56c1 211 SUPERFAMILY SSF46955 8 120 1.47E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_D163 f93d9042c3a3d3da2adbb562ff3f56c1 211 Pfam PF13152 Protein of unknown function (DUF3967) 169 210 3.7E-12 T 14-10-2018 IPR025052 Domain of unknown function DUF3967 MC28_D163 f93d9042c3a3d3da2adbb562ff3f56c1 211 Gene3D G3DSA:1.10.1660.10 4 82 3.2E-12 T 14-10-2018 MC28_3534 d3caa28947debf8006810c97998503a4 343 Pfam PF00482 Type II secretion system (T2SS), protein F 15 134 1.1E-13 T 14-10-2018 IPR018076 Type II secretion system F domain MC28_3534 d3caa28947debf8006810c97998503a4 343 Pfam PF00482 Type II secretion system (T2SS), protein F 213 335 8.2E-19 T 14-10-2018 IPR018076 Type II secretion system F domain MC28_3534 d3caa28947debf8006810c97998503a4 343 Gene3D G3DSA:1.20.81.30 2 114 1.1E-11 T 14-10-2018 MC28_3534 d3caa28947debf8006810c97998503a4 343 Gene3D G3DSA:1.20.81.30 196 308 9.7E-14 T 14-10-2018 MC28_3534 d3caa28947debf8006810c97998503a4 343 PRINTS PR00812 Bacterial general secretion pathway protein F signature 106 134 3.3E-5 T 14-10-2018 IPR003004 GspF/PilC family MC28_3534 d3caa28947debf8006810c97998503a4 343 PRINTS PR00812 Bacterial general secretion pathway protein F signature 308 322 3.3E-5 T 14-10-2018 IPR003004 GspF/PilC family MC28_3534 d3caa28947debf8006810c97998503a4 343 PRINTS PR00812 Bacterial general secretion pathway protein F signature 324 343 3.3E-5 T 14-10-2018 IPR003004 GspF/PilC family MC28_3349 f547cda08d25f793ba2d37c1af6cd911 190 SUPERFAMILY SSF46785 87 159 9.98E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3349 f547cda08d25f793ba2d37c1af6cd911 190 SUPERFAMILY SSF46785 1 81 8.03E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3349 f547cda08d25f793ba2d37c1af6cd911 190 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 184 6.5E-52 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 MC28_3349 f547cda08d25f793ba2d37c1af6cd911 190 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 166 1.1E-57 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 MC28_3349 f547cda08d25f793ba2d37c1af6cd911 190 PIRSF PIRSF019345 1 185 2.6E-56 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 MC28_3349 f547cda08d25f793ba2d37c1af6cd911 190 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 181 36.112 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 MC28_3349 f547cda08d25f793ba2d37c1af6cd911 190 Gene3D G3DSA:1.10.10.10 2 83 5.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3349 f547cda08d25f793ba2d37c1af6cd911 190 Gene3D G3DSA:1.10.10.10 84 179 2.8E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Pfam PF00575 S1 RNA binding domain 620 691 8.9E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 SUPERFAMILY SSF54211 293 489 3.24E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 1.2E-16 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Pfam PF03725 3' exoribonuclease family, domain 2 460 528 2.0E-6 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 SUPERFAMILY SSF50249 621 704 6.38E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Gene3D G3DSA:3.30.230.70 1 230 1.5E-84 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 SUPERFAMILY SSF54211 8 144 2.83E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_3031 525f99a9168134c1d93afb039484fbf8 712 SUPERFAMILY SSF54791 556 641 4.93E-24 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Gene3D G3DSA:2.40.50.140 623 693 1.0E-26 T 14-10-2018 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Gene3D G3DSA:3.30.1370.10 551 622 6.8E-21 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 PIRSF PIRSF005499 2 712 8.0E-302 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 SUPERFAMILY SSF55666 145 235 2.88E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 692 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Gene3D G3DSA:3.30.230.70 234 550 5.9E-118 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Pfam PF01138 3' exoribonuclease family, domain 1 324 457 3.6E-18 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 4.3E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 2.2E-15 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Pfam PF00013 KH domain 557 615 1.4E-9 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 31.265 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 SMART SM00322 553 618 1.4E-12 T 14-10-2018 IPR004087 K Homology domain GO:0003676 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 SMART SM00316 621 691 1.7E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_3031 525f99a9168134c1d93afb039484fbf8 712 SUPERFAMILY SSF55666 451 549 8.12E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 MC28_0288 4481ebbcf99a4a8aa19be226ea3da6c4 467 PIRSF PIRSF026631 6 467 2.2E-134 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 MC28_0288 4481ebbcf99a4a8aa19be226ea3da6c4 467 Pfam PF03703 Bacterial PH domain 239 314 5.8E-11 T 14-10-2018 IPR005182 Domain of unknown function DUF304 MC28_0288 4481ebbcf99a4a8aa19be226ea3da6c4 467 Pfam PF03703 Bacterial PH domain 385 460 5.8E-10 T 14-10-2018 IPR005182 Domain of unknown function DUF304 MC28_0288 4481ebbcf99a4a8aa19be226ea3da6c4 467 Pfam PF03703 Bacterial PH domain 49 123 3.3E-13 T 14-10-2018 IPR005182 Domain of unknown function DUF304 MC28_2889 70669422d9005ff026df6f36a61697bb 405 Gene3D G3DSA:3.40.630.10 16 374 2.7E-146 T 14-10-2018 MC28_2889 70669422d9005ff026df6f36a61697bb 405 Pfam PF01546 Peptidase family M20/M25/M40 74 385 5.0E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_2889 70669422d9005ff026df6f36a61697bb 405 SUPERFAMILY SSF55031 186 298 1.02E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_2889 70669422d9005ff026df6f36a61697bb 405 PIRSF PIRSF005962 1 393 1.7E-131 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_2889 70669422d9005ff026df6f36a61697bb 405 SUPERFAMILY SSF53187 3 391 2.77E-90 T 14-10-2018 MC28_2889 70669422d9005ff026df6f36a61697bb 405 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 377 7.3E-127 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_2889 70669422d9005ff026df6f36a61697bb 405 Pfam PF07687 Peptidase dimerisation domain 187 279 1.8E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_2889 70669422d9005ff026df6f36a61697bb 405 Gene3D G3DSA:3.30.70.360 183 297 2.7E-146 T 14-10-2018 MC28_2774 8f60e86f6d87d13d6f5274e191b481fa 487 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_2774 8f60e86f6d87d13d6f5274e191b481fa 487 Gene3D G3DSA:3.40.50.12780 4 386 1.1E-74 T 14-10-2018 MC28_2774 8f60e86f6d87d13d6f5274e191b481fa 487 Gene3D G3DSA:3.30.300.310 387 483 4.1E-25 T 14-10-2018 MC28_2774 8f60e86f6d87d13d6f5274e191b481fa 487 SUPERFAMILY SSF56801 9 480 1.83E-103 T 14-10-2018 MC28_2774 8f60e86f6d87d13d6f5274e191b481fa 487 Pfam PF13193 AMP-binding enzyme C-terminal domain 398 469 1.4E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_2774 8f60e86f6d87d13d6f5274e191b481fa 487 Pfam PF00501 AMP-binding enzyme 9 387 2.9E-63 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_2578 4e004e33f80404288b2b7ca55d3bc9d9 210 Pfam PF01810 LysE type translocator 15 206 9.6E-36 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 MC28_2578 4e004e33f80404288b2b7ca55d3bc9d9 210 PIRSF PIRSF006324 1 209 3.6E-49 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 MC28_0145 99b4a2a1bb39f434be444029bbd3989d 496 SMART SM00729 171 395 1.8E-45 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_0145 99b4a2a1bb39f434be444029bbd3989d 496 Pfam PF04055 Radical SAM superfamily 179 351 2.0E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_0145 99b4a2a1bb39f434be444029bbd3989d 496 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 90 490 8.9E-148 T 14-10-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ MC28_0145 99b4a2a1bb39f434be444029bbd3989d 496 Gene3D G3DSA:3.80.30.20 134 486 5.7E-66 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe MC28_0145 99b4a2a1bb39f434be444029bbd3989d 496 SUPERFAMILY SSF102114 164 478 1.12E-69 T 14-10-2018 MC28_0984 ddcd19f5887d1a405899b920f18dfe75 313 Pfam PF00005 ABC transporter 20 163 4.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0984 ddcd19f5887d1a405899b920f18dfe75 313 SMART SM00382 29 211 9.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0984 ddcd19f5887d1a405899b920f18dfe75 313 Pfam PF13732 Domain of unknown function (DUF4162) 218 305 1.6E-6 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 MC28_0984 ddcd19f5887d1a405899b920f18dfe75 313 Gene3D G3DSA:3.40.50.300 1 239 1.4E-72 T 14-10-2018 MC28_0984 ddcd19f5887d1a405899b920f18dfe75 313 SUPERFAMILY SSF52540 4 223 3.06E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0984 ddcd19f5887d1a405899b920f18dfe75 313 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_1374 cc34a0ed4ab107db66665b133097ec31 215 Pfam PF01966 HD domain 28 126 9.2E-9 T 14-10-2018 IPR006674 HD domain MC28_1374 cc34a0ed4ab107db66665b133097ec31 215 SMART SM00471 22 136 2.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain MC28_1374 cc34a0ed4ab107db66665b133097ec31 215 SUPERFAMILY SSF109604 4 213 7.33E-77 T 14-10-2018 MC28_1374 cc34a0ed4ab107db66665b133097ec31 215 Gene3D G3DSA:1.10.472.50 1 99 3.3E-37 T 14-10-2018 MC28_1374 cc34a0ed4ab107db66665b133097ec31 215 Gene3D G3DSA:1.20.58.1910 102 215 1.0E-49 T 14-10-2018 MC28_G307 49ac1337b30a02d6c218533cedc61634 357 Pfam PF00296 Luciferase-like monooxygenase 1 302 2.7E-49 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MC28_G307 49ac1337b30a02d6c218533cedc61634 357 Gene3D G3DSA:3.20.20.30 1 351 2.7E-88 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_G307 49ac1337b30a02d6c218533cedc61634 357 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 339 6.5E-155 T 14-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative MC28_G307 49ac1337b30a02d6c218533cedc61634 357 SUPERFAMILY SSF51679 1 340 3.27E-79 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_0835 934d7f99522a0796a0003d63bad0563a 300 Gene3D G3DSA:1.10.150.20 188 260 2.9E-85 T 14-10-2018 MC28_0835 934d7f99522a0796a0003d63bad0563a 300 SUPERFAMILY SSF47807 185 290 2.39E-26 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily MC28_0835 934d7f99522a0796a0003d63bad0563a 300 SMART SM00475 14 275 1.7E-106 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 MC28_0835 934d7f99522a0796a0003d63bad0563a 300 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 185 272 2.8E-27 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 MC28_0835 934d7f99522a0796a0003d63bad0563a 300 Gene3D G3DSA:3.40.50.1010 16 289 2.9E-85 T 14-10-2018 MC28_0835 934d7f99522a0796a0003d63bad0563a 300 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 15 182 5.8E-50 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 MC28_0835 934d7f99522a0796a0003d63bad0563a 300 SUPERFAMILY SSF88723 9 184 1.81E-46 T 14-10-2018 IPR029060 PIN-like domain superfamily MC28_0835 934d7f99522a0796a0003d63bad0563a 300 SMART SM00279 187 222 9.2E-15 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 SUPERFAMILY SSF51905 6 323 7.56E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 Gene3D G3DSA:3.50.50.60 7 298 8.0E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 294 3.2E-101 T 14-10-2018 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 4.6E-13 T 14-10-2018 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 4.6E-13 T 14-10-2018 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.6E-13 T 14-10-2018 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 262 4.6E-13 T 14-10-2018 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 Gene3D G3DSA:3.50.50.60 136 253 8.0E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 6 323 9.2E-140 T 14-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 132 1.8E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 285 303 1.8E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 159 183 1.8E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.8E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_0729 2f53b485aab71b7aa5a583bd3334df46 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 248 269 1.8E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5434 4aa0dea5daed8f77786c3494cb534ee7 492 PIRSF PIRSF005690 6 492 3.3E-164 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_5434 4aa0dea5daed8f77786c3494cb534ee7 492 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 17 478 9.6E-169 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_5011 2a2fc95044f0e54350643eb209a14699 346 SUPERFAMILY SSF55326 3 167 9.87E-53 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily MC28_5011 2a2fc95044f0e54350643eb209a14699 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 340 48.737 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5011 2a2fc95044f0e54350643eb209a14699 346 Gene3D G3DSA:3.90.650.10 168 346 1.2E-77 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily MC28_5011 2a2fc95044f0e54350643eb209a14699 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 333 8.6E-144 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 MC28_5011 2a2fc95044f0e54350643eb209a14699 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 161 2.0E-18 T 14-10-2018 IPR016188 PurM-like, N-terminal domain MC28_5011 2a2fc95044f0e54350643eb209a14699 346 Gene3D G3DSA:3.30.1330.10 1 167 9.0E-72 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily MC28_5011 2a2fc95044f0e54350643eb209a14699 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 339 7.0E-38 T 14-10-2018 IPR010918 PurM-like, C-terminal domain MC28_5011 2a2fc95044f0e54350643eb209a14699 346 SUPERFAMILY SSF56042 168 339 1.64E-59 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily MC28_0334 1dcc1a52316fb046667145e8913ef8b8 167 SUPERFAMILY SSF88946 10 99 2.39E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0334 1dcc1a52316fb046667145e8913ef8b8 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 163 1.7E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_0334 1dcc1a52316fb046667145e8913ef8b8 167 Gene3D G3DSA:1.10.1740.10 4 84 6.7E-21 T 14-10-2018 MC28_0334 1dcc1a52316fb046667145e8913ef8b8 167 Pfam PF04542 Sigma-70 region 2 16 82 1.3E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0334 1dcc1a52316fb046667145e8913ef8b8 167 Pfam PF08281 Sigma-70, region 4 114 160 3.4E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_0334 1dcc1a52316fb046667145e8913ef8b8 167 SUPERFAMILY SSF88659 109 160 7.1E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_0334 1dcc1a52316fb046667145e8913ef8b8 167 TIGRFAM TIGR02950 SigM_subfam: RNA polymerase sigma factor, SigM family 12 166 2.1E-68 T 14-10-2018 IPR014296 RNA polymerase sigma-M, bacillaceae GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_0334 1dcc1a52316fb046667145e8913ef8b8 167 Gene3D G3DSA:1.10.10.10 107 165 1.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2544 8a2f96424c69a6dadde270bf3eb54adf 109 SMART SM00914 63 98 1.2E-8 T 14-10-2018 IPR014957 IDEAL domain MC28_2544 8a2f96424c69a6dadde270bf3eb54adf 109 Gene3D G3DSA:4.10.810.10 57 106 5.0E-6 T 14-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 MC28_2544 8a2f96424c69a6dadde270bf3eb54adf 109 Pfam PF08858 IDEAL domain 71 98 5.1E-7 T 14-10-2018 IPR014957 IDEAL domain MC28_3600 26ae892bde23897c189a91b0a25be68e 57 Pfam PF01165 Ribosomal protein S21 5 57 5.2E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3600 26ae892bde23897c189a91b0a25be68e 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3600 26ae892bde23897c189a91b0a25be68e 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 9.0E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3600 26ae892bde23897c189a91b0a25be68e 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 9.0E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3600 26ae892bde23897c189a91b0a25be68e 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 9.0E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3600 26ae892bde23897c189a91b0a25be68e 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 9.0E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3600 26ae892bde23897c189a91b0a25be68e 57 Gene3D G3DSA:1.20.5.1150 16 56 3.1E-18 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3600 26ae892bde23897c189a91b0a25be68e 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 1.6E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3600 26ae892bde23897c189a91b0a25be68e 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.633 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3600 26ae892bde23897c189a91b0a25be68e 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 1.0E-8 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_G154 211829a34ab818a0557258bfe4624c3c 93 Pfam PF00216 Bacterial DNA-binding protein 4 93 6.7E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_G154 211829a34ab818a0557258bfe4624c3c 93 Gene3D G3DSA:4.10.520.10 4 93 8.0E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_G154 211829a34ab818a0557258bfe4624c3c 93 SMART SM00411 4 93 1.8E-42 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_G154 211829a34ab818a0557258bfe4624c3c 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MC28_G154 211829a34ab818a0557258bfe4624c3c 93 SUPERFAMILY SSF47729 4 93 1.91E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_G154 211829a34ab818a0557258bfe4624c3c 93 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.0E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_G154 211829a34ab818a0557258bfe4624c3c 93 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.0E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_G154 211829a34ab818a0557258bfe4624c3c 93 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.0E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_1302 2f3e7809e392c80740c9a5e502432176 101 Gene3D G3DSA:2.60.120.10 1 97 2.3E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_1302 2f3e7809e392c80740c9a5e502432176 101 SUPERFAMILY SSF51182 11 74 1.54E-7 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_3057 c2e028c75448ce8c7e45f0ad5dd0fb61 289 SUPERFAMILY SSF102405 80 287 4.35E-32 T 14-10-2018 MC28_3057 c2e028c75448ce8c7e45f0ad5dd0fb61 289 Pfam PF02481 DNA recombination-mediator protein A 71 278 1.0E-75 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 MC28_3057 c2e028c75448ce8c7e45f0ad5dd0fb61 289 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 70 286 3.0E-72 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 MC28_3057 c2e028c75448ce8c7e45f0ad5dd0fb61 289 Gene3D G3DSA:3.40.50.450 16 288 6.3E-90 T 14-10-2018 MC28_3126 1383dccf4175940db280ed6d43740671 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 86 99 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 PIRSF PIRSF000770 2 239 3.7E-79 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 Pfam PF04542 Sigma-70 region 2 62 131 2.1E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 Pfam PF04545 Sigma-70, region 4 180 233 3.7E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 7 239 2.7E-137 T 14-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_3126 1383dccf4175940db280ed6d43740671 239 Gene3D G3DSA:1.20.120.1810 26 131 2.2E-25 T 14-10-2018 MC28_3126 1383dccf4175940db280ed6d43740671 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 234 6.8E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 SUPERFAMILY SSF88946 24 130 4.97E-35 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 SUPERFAMILY SSF88659 143 237 4.11E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_3126 1383dccf4175940db280ed6d43740671 239 Gene3D G3DSA:1.10.10.10 168 239 1.8E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3126 1383dccf4175940db280ed6d43740671 239 PRINTS PR00046 Major sigma-70 factor signature 86 99 7.1E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 PRINTS PR00046 Major sigma-70 factor signature 184 196 7.1E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 PRINTS PR00046 Major sigma-70 factor signature 220 231 7.1E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_3126 1383dccf4175940db280ed6d43740671 239 PRINTS PR00046 Major sigma-70 factor signature 205 220 7.1E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 MC28_0724 ea362cb1e598f89ea3de941c9fe7f15c 202 Gene3D G3DSA:3.30.70.1950 104 196 3.7E-26 T 14-10-2018 IPR038471 MecA, C-terminal domain superfamily MC28_0724 ea362cb1e598f89ea3de941c9fe7f15c 202 Hamap MF_01124 Adapter protein MecA [mecA]. 1 195 24.509 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA MC28_0724 ea362cb1e598f89ea3de941c9fe7f15c 202 PIRSF PIRSF029008 1 197 9.6E-64 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA MC28_0724 ea362cb1e598f89ea3de941c9fe7f15c 202 Pfam PF05389 Negative regulator of genetic competence (MecA) 101 191 1.8E-14 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA MC28_0724 ea362cb1e598f89ea3de941c9fe7f15c 202 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 89 6.4E-27 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA MC28_0604 1c7003e8c05d4aeb720b8c42449ea522 378 Gene3D G3DSA:3.20.20.70 17 372 1.3E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0604 1c7003e8c05d4aeb720b8c42449ea522 378 SUPERFAMILY SSF51412 17 376 9.16E-67 T 14-10-2018 MC28_0604 1c7003e8c05d4aeb720b8c42449ea522 378 Pfam PF03060 Nitronate monooxygenase 18 359 2.4E-89 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 MC28_4432 34c3c2f63afcee308421c255b15dedf2 374 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 89 239 1.5E-51 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_4432 34c3c2f63afcee308421c255b15dedf2 374 Gene3D G3DSA:1.10.260.150 66 329 2.2E-93 T 14-10-2018 MC28_4432 34c3c2f63afcee308421c255b15dedf2 374 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 88 239 3.5E-51 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_5206 ae629a63c10f53f90d0a3c40418266ca 647 Pfam PF06605 Prophage endopeptidase tail 24 342 5.0E-30 T 14-10-2018 IPR010572 Prophage tail endopeptidase MC28_5206 ae629a63c10f53f90d0a3c40418266ca 647 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 12 326 1.2E-96 T 14-10-2018 IPR007119 Phage minor structural protein, N-terminal domain MC28_4389 a311eb5bd81ddb27a87dbf029f1427b4 293 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 7 289 42.543 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 MC28_4389 a311eb5bd81ddb27a87dbf029f1427b4 293 PIRSF PIRSF005052 7 292 9.8E-109 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 MC28_4389 a311eb5bd81ddb27a87dbf029f1427b4 293 Gene3D G3DSA:3.40.50.300 2 175 2.2E-5 T 14-10-2018 MC28_4389 a311eb5bd81ddb27a87dbf029f1427b4 293 Pfam PF03668 P-loop ATPase protein family 7 290 1.9E-124 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 MC28_4389 a311eb5bd81ddb27a87dbf029f1427b4 293 SUPERFAMILY SSF52540 4 162 3.9E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_E124 a3bdf71073f1423aadf8ad4fd7000987 67 Gene3D G3DSA:3.30.2140.20 1 67 7.5E-16 T 14-10-2018 MC28_E124 a3bdf71073f1423aadf8ad4fd7000987 67 SUPERFAMILY SSF54001 4 66 1.3E-7 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_E124 a3bdf71073f1423aadf8ad4fd7000987 67 Pfam PF00797 N-acetyltransferase 6 66 2.2E-7 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_3719 fb51525b95ee7f5ddc1e77a8fafc6f51 368 Hamap MF_00569 Quinolinate synthase A [nadA]. 22 367 56.636 T 14-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 MC28_3719 fb51525b95ee7f5ddc1e77a8fafc6f51 368 Pfam PF02445 Quinolinate synthetase A protein 29 366 2.1E-106 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 MC28_3719 fb51525b95ee7f5ddc1e77a8fafc6f51 368 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 21 366 8.1E-116 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 MC28_3719 fb51525b95ee7f5ddc1e77a8fafc6f51 368 SUPERFAMILY SSF142754 34 366 1.44E-97 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 MC28_3719 fb51525b95ee7f5ddc1e77a8fafc6f51 368 Gene3D G3DSA:3.40.50.10800 112 366 1.5E-81 T 14-10-2018 MC28_3719 fb51525b95ee7f5ddc1e77a8fafc6f51 368 Gene3D G3DSA:3.40.50.10800 29 348 1.5E-81 T 14-10-2018 MC28_3719 fb51525b95ee7f5ddc1e77a8fafc6f51 368 Gene3D G3DSA:3.40.50.10800 230 315 1.5E-81 T 14-10-2018 MC28_1142 6e87e3822f2d331c948e01b0ac56f403 179 Pfam PF16157 Domain of unknown function (DUF4865) 1 178 4.5E-66 T 14-10-2018 IPR032349 Protein of unknown function DUF4865 MC28_3623 9a8ac533a84613c5235383aeceb9e0e5 189 Pfam PF01966 HD domain 18 130 9.5E-14 T 14-10-2018 IPR006674 HD domain MC28_3623 9a8ac533a84613c5235383aeceb9e0e5 189 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 180 4.1E-63 T 14-10-2018 IPR005249 Conserved hypothetical protein CHP00488 MC28_3623 9a8ac533a84613c5235383aeceb9e0e5 189 Gene3D G3DSA:1.10.3210.10 1 186 1.6E-59 T 14-10-2018 MC28_3623 9a8ac533a84613c5235383aeceb9e0e5 189 SUPERFAMILY SSF109604 5 182 2.89E-36 T 14-10-2018 MC28_3623 9a8ac533a84613c5235383aeceb9e0e5 189 SMART SM00471 14 141 3.1E-9 T 14-10-2018 IPR003607 HD/PDEase domain MC28_3623 9a8ac533a84613c5235383aeceb9e0e5 189 TIGRFAM TIGR00277 HDIG: HDIG domain 15 109 5.5E-8 T 14-10-2018 IPR006675 HDIG domain MC28_2758 a6f7aae9bdc3c238bd4c719f254a2901 47 Pfam PF13040 Fur-regulated basic protein B 2 40 2.7E-17 T 14-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 Gene3D G3DSA:2.60.40.290 585 678 2.4E-22 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 Gene3D G3DSA:2.60.40.10 489 573 3.2E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 Pfam PF00704 Glycosyl hydrolases family 18 46 456 1.3E-99 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 ProSitePatterns PS01095 Chitinases family 18 active site. 207 215 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 SMART SM00637 585 678 2.3E-32 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 SUPERFAMILY SSF51445 38 457 9.59E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 SUPERFAMILY SSF54556 345 427 1.1E-22 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 SUPERFAMILY SSF49384 580 676 3.42E-24 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 SUPERFAMILY SSF49265 488 569 1.62E-13 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 Gene3D G3DSA:3.20.20.80 47 456 1.3E-159 T 14-10-2018 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 Pfam PF00553 Cellulose binding domain 586 668 8.3E-20 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 SMART SM00636 45 456 9.0E-160 T 14-10-2018 IPR011583 Chitinase II GO:0008061 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 SMART SM00060 491 563 2.9E-11 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 Pfam PF00041 Fibronectin type III domain 494 563 2.8E-7 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_5109 ec76b73230932d8d611a4926ee0fef31 680 Gene3D G3DSA:3.10.50.10 344 427 1.3E-159 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily MC28_4357 42e5e340065dd7690f644fd572585b80 282 SUPERFAMILY SSF81345 4 274 2.09E-62 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_4357 42e5e340065dd7690f644fd572585b80 282 Gene3D G3DSA:1.10.3470.10 1 280 5.1E-60 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_4357 42e5e340065dd7690f644fd572585b80 282 Pfam PF01032 FecCD transport family 3 274 9.9E-66 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_0941 f89ce9d783509c42542c63fe57b240b5 191 SUPERFAMILY SSF53254 1 174 1.15E-37 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_0941 f89ce9d783509c42542c63fe57b240b5 191 PIRSF PIRSF000709 1 176 3.1E-5 T 14-10-2018 MC28_0941 f89ce9d783509c42542c63fe57b240b5 191 Gene3D G3DSA:3.40.50.1240 1 184 1.8E-34 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_0941 f89ce9d783509c42542c63fe57b240b5 191 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 174 4.7E-28 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_0941 f89ce9d783509c42542c63fe57b240b5 191 SMART SM00855 3 144 9.1E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_3622 7646ea5f58c33bcfd59cf19ef54a43d2 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 104 3.9E-36 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS MC28_3622 7646ea5f58c33bcfd59cf19ef54a43d2 118 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 5.7E-26 T 14-10-2018 MC28_3622 7646ea5f58c33bcfd59cf19ef54a43d2 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 105 24.564 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS MC28_3622 7646ea5f58c33bcfd59cf19ef54a43d2 118 Gene3D G3DSA:3.30.460.10 1 108 7.6E-38 T 14-10-2018 MC28_3622 7646ea5f58c33bcfd59cf19ef54a43d2 118 SUPERFAMILY SSF81301 2 114 1.14E-39 T 14-10-2018 MC28_5020 075aeac4a7a654275501885ca7bb6c80 749 Gene3D G3DSA:1.10.10.160 119 195 6.6E-110 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily MC28_5020 075aeac4a7a654275501885ca7bb6c80 749 Gene3D G3DSA:3.40.50.300 15 282 6.6E-110 T 14-10-2018 MC28_5020 075aeac4a7a654275501885ca7bb6c80 749 SUPERFAMILY SSF52540 9 650 6.84E-188 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5020 075aeac4a7a654275501885ca7bb6c80 749 Gene3D G3DSA:1.10.486.10 391 554 4.5E-130 T 14-10-2018 MC28_5020 075aeac4a7a654275501885ca7bb6c80 749 Pfam PF13361 UvrD-like helicase C-terminal domain 285 623 6.9E-75 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 MC28_5020 075aeac4a7a654275501885ca7bb6c80 749 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 279 1.7E-87 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 MC28_5020 075aeac4a7a654275501885ca7bb6c80 749 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 11 746 0.0 T 14-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 MC28_5020 075aeac4a7a654275501885ca7bb6c80 749 Gene3D G3DSA:3.40.50.300 288 641 4.5E-130 T 14-10-2018 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 SUPERFAMILY SSF49401 486 578 2.98E-5 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 SUPERFAMILY SSF49401 355 447 1.22E-5 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1139 1191 1.8E-19 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1803 1855 2.3E-16 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1007 1058 1.2E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 743 795 6.4E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2333 2385 1.4E-16 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1935 1987 8.1E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 479 531 2.9E-20 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2067 2119 1.3E-15 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1671 1723 7.3E-19 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1271 1323 3.0E-16 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2199 2250 8.5E-14 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1406 1458 1.7E-16 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 611 663 7.0E-19 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1539 1591 4.9E-16 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 875 927 2.3E-17 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 347 399 1.2E-18 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 1934 2018 2.5E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 1405 1499 1.5E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 743 836 2.0E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 346 434 7.4E-14 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 1671 1766 1.1E-13 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 873 963 5.2E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 610 704 3.5E-13 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 1803 1898 1.2E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 2331 2428 7.0E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 478 564 7.6E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 1006 1096 6.4E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 1139 1232 2.8E-13 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 1269 1366 2.3E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Pfam PF01345 Domain of unknown function DUF11 2067 2162 2.7E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Gene3D G3DSA:2.60.40.740 341 469 1.2E-7 T 14-10-2018 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Gene3D G3DSA:2.60.40.740 996 1111 1.6E-5 T 14-10-2018 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Gene3D G3DSA:2.60.40.740 739 870 3.2E-5 T 14-10-2018 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Gene3D G3DSA:2.60.40.740 470 606 3.5E-7 T 14-10-2018 MC28_2695 98a9a7c5d4796a2b71e9e39bf61c29f0 2490 Gene3D G3DSA:2.60.40.740 1400 1530 3.2E-5 T 14-10-2018 MC28_2888 2bb20f20fef87f333e2698f9e1b99685 350 ProSitePatterns PS01095 Chitinases family 18 active site. 127 135 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 MC28_2888 2bb20f20fef87f333e2698f9e1b99685 350 SMART SM00636 24 328 1.4E-7 T 14-10-2018 IPR011583 Chitinase II GO:0008061 MC28_2888 2bb20f20fef87f333e2698f9e1b99685 350 Pfam PF00704 Glycosyl hydrolases family 18 26 328 4.8E-30 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 MC28_2888 2bb20f20fef87f333e2698f9e1b99685 350 Gene3D G3DSA:3.20.20.80 18 350 1.3E-110 T 14-10-2018 MC28_2888 2bb20f20fef87f333e2698f9e1b99685 350 SUPERFAMILY SSF51445 23 337 3.28E-60 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_3307 c66ab8a1bbb4398c06849b361db42e58 169 Pfam PF00106 short chain dehydrogenase 17 116 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3307 c66ab8a1bbb4398c06849b361db42e58 169 Gene3D G3DSA:3.40.50.720 6 141 7.1E-27 T 14-10-2018 MC28_3307 c66ab8a1bbb4398c06849b361db42e58 169 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 9.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3307 c66ab8a1bbb4398c06849b361db42e58 169 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 9.7E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3307 c66ab8a1bbb4398c06849b361db42e58 169 SUPERFAMILY SSF51735 10 117 4.94E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4631 2860a7ab1cdce212be9154c25479be24 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 221 41.052 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_4631 2860a7ab1cdce212be9154c25479be24 225 SMART SM00987 50 210 1.8E-36 T 14-10-2018 MC28_4631 2860a7ab1cdce212be9154c25479be24 225 Gene3D G3DSA:3.40.470.10 1 225 4.9E-98 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_4631 2860a7ab1cdce212be9154c25479be24 225 SUPERFAMILY SSF52141 5 222 9.59E-93 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_4631 2860a7ab1cdce212be9154c25479be24 225 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 2.3E-27 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_4631 2860a7ab1cdce212be9154c25479be24 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 213 4.3E-81 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_4631 2860a7ab1cdce212be9154c25479be24 225 SMART SM00986 50 210 1.8E-36 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_4631 2860a7ab1cdce212be9154c25479be24 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_3209 10352456016c90e579c15b18bb2c3fb2 376 SUPERFAMILY SSF56349 62 351 2.94E-69 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_3209 10352456016c90e579c15b18bb2c3fb2 376 Gene3D G3DSA:1.10.150.130 60 157 6.9E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_3209 10352456016c90e579c15b18bb2c3fb2 376 Gene3D G3DSA:1.10.443.10 158 359 3.2E-51 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_3209 10352456016c90e579c15b18bb2c3fb2 376 Pfam PF00589 Phage integrase family 171 345 1.8E-31 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_3209 10352456016c90e579c15b18bb2c3fb2 376 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 63 119 2.1E-16 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_3209 10352456016c90e579c15b18bb2c3fb2 376 Pfam PF14657 Arm DNA-binding domain 10 54 1.2E-14 T 14-10-2018 IPR028259 AP2-like integrase, N-terminal domain MC28_5334 476d81627e0b648917265c1f3a694f98 425 SUPERFAMILY SSF56176 345 424 1.06E-15 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_5334 476d81627e0b648917265c1f3a694f98 425 Pfam PF00571 CBS domain 281 331 3.4E-7 T 14-10-2018 IPR000644 CBS domain MC28_5334 476d81627e0b648917265c1f3a694f98 425 Pfam PF00571 CBS domain 211 263 0.0046 T 14-10-2018 IPR000644 CBS domain MC28_5334 476d81627e0b648917265c1f3a694f98 425 Pfam PF03471 Transporter associated domain 349 423 1.2E-15 T 14-10-2018 IPR005170 Transporter-associated domain MC28_5334 476d81627e0b648917265c1f3a694f98 425 Pfam PF01595 Domain of unknown function DUF21 2 194 8.8E-51 T 14-10-2018 IPR002550 CNNM, transmembrane domain MC28_5334 476d81627e0b648917265c1f3a694f98 425 SMART SM01091 347 424 1.8E-20 T 14-10-2018 IPR005170 Transporter-associated domain MC28_5334 476d81627e0b648917265c1f3a694f98 425 SUPERFAMILY SSF54631 197 334 1.39E-29 T 14-10-2018 MC28_5334 476d81627e0b648917265c1f3a694f98 425 Gene3D G3DSA:3.30.465.10 341 425 1.3E-16 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 MC28_5334 476d81627e0b648917265c1f3a694f98 425 Gene3D G3DSA:3.10.580.10 188 340 1.1E-48 T 14-10-2018 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 SUPERFAMILY SSF56645 2 242 1.14E-96 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 SUPERFAMILY SSF47203 227 378 8.22E-62 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 Gene3D G3DSA:2.40.110.10 121 234 2.3E-46 T 14-10-2018 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 Gene3D G3DSA:1.20.140.10 235 379 4.2E-59 T 14-10-2018 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 PIRSF PIRSF016578 4 376 4.3E-21 T 14-10-2018 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 8.0E-44 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.4E-27 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 376 2.6E-53 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 MC28_4577 aab5d43993c44cbf2cc9fbb6ba52241a 379 Gene3D G3DSA:1.10.540.10 1 120 1.3E-47 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 MC28_4932 8cb7b239c65151de4656cdf0046cd70a 476 Gene3D G3DSA:1.20.1740.10 25 474 1.4E-134 T 14-10-2018 MC28_4932 8cb7b239c65151de4656cdf0046cd70a 476 Pfam PF13520 Amino acid permease 31 447 1.2E-64 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_4932 8cb7b239c65151de4656cdf0046cd70a 476 PIRSF PIRSF006060 15 476 1.3E-99 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_0981 44d2c2c4c56dc6230de4469be99047f1 160 SUPERFAMILY SSF88659 87 155 5.79E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_0981 44d2c2c4c56dc6230de4469be99047f1 160 SUPERFAMILY SSF88946 1 73 6.28E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0981 44d2c2c4c56dc6230de4469be99047f1 160 Pfam PF04542 Sigma-70 region 2 1 66 5.3E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0981 44d2c2c4c56dc6230de4469be99047f1 160 Pfam PF08281 Sigma-70, region 4 99 149 9.5E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_0981 44d2c2c4c56dc6230de4469be99047f1 160 Gene3D G3DSA:1.10.1740.10 1 92 2.1E-19 T 14-10-2018 MC28_0981 44d2c2c4c56dc6230de4469be99047f1 160 Gene3D G3DSA:1.10.10.10 93 156 6.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0981 44d2c2c4c56dc6230de4469be99047f1 160 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 153 1.5E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_3016 be8631dbcab61b946dfd3bbaf1f9b475 315 SUPERFAMILY SSF158499 186 247 9.42E-18 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_3016 be8631dbcab61b946dfd3bbaf1f9b475 315 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 185 253 5.1E-21 T 14-10-2018 IPR006343 DnaD domain MC28_3016 be8631dbcab61b946dfd3bbaf1f9b475 315 Pfam PF07261 Replication initiation and membrane attachment 186 253 1.2E-18 T 14-10-2018 IPR006343 DnaD domain MC28_3016 be8631dbcab61b946dfd3bbaf1f9b475 315 Gene3D G3DSA:1.10.10.630 183 253 3.7E-23 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_1161 cb3e02a24befc359797dfecb50007938 228 Pfam PF00072 Response regulator receiver domain 8 116 1.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1161 cb3e02a24befc359797dfecb50007938 228 Gene3D G3DSA:3.40.50.2300 5 129 4.2E-39 T 14-10-2018 MC28_1161 cb3e02a24befc359797dfecb50007938 228 SUPERFAMILY SSF52172 6 164 4.84E-44 T 14-10-2018 IPR011006 CheY-like superfamily MC28_1161 cb3e02a24befc359797dfecb50007938 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 2.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1161 cb3e02a24befc359797dfecb50007938 228 SMART SM00862 149 224 1.9E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1161 cb3e02a24befc359797dfecb50007938 228 SUPERFAMILY SSF46894 131 225 2.55E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_1161 cb3e02a24befc359797dfecb50007938 228 SMART SM00448 6 116 5.8E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1161 cb3e02a24befc359797dfecb50007938 228 Gene3D G3DSA:1.10.10.10 130 228 1.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4032 019d6c3055bd98bbeac448178b19a2c0 275 Gene3D G3DSA:3.40.50.300 1 252 2.7E-47 T 14-10-2018 MC28_4032 019d6c3055bd98bbeac448178b19a2c0 275 SUPERFAMILY SSF52540 2 204 1.74E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4032 019d6c3055bd98bbeac448178b19a2c0 275 SMART SM00382 27 211 6.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4032 019d6c3055bd98bbeac448178b19a2c0 275 Pfam PF00005 ABC transporter 18 151 9.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3587 43bb4ef0ac06f6edc7ad5224152d6942 270 Pfam PF03618 Kinase/pyrophosphorylase 6 260 9.0E-96 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 MC28_3587 43bb4ef0ac06f6edc7ad5224152d6942 270 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 266 60.559 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein MC28_1463 08cf40a0f40ce489c3ba7e8ad3efb864 249 Pfam PF14344 Domain of unknown function (DUF4397) 61 173 9.1E-29 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 Pfam PF00579 tRNA synthetases class I (W and Y) 3 278 2.8E-84 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 Gene3D G3DSA:3.40.50.620 4 323 6.9E-140 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 325 42.767 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 3.0E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 139 160 3.0E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 3.0E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 192 202 3.0E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 324 1.1E-117 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 SUPERFAMILY SSF52374 3 324 9.09E-100 T 14-10-2018 MC28_0399 48297aaf14734ceabd44bda1c577b8de 329 Gene3D G3DSA:1.10.240.10 183 293 6.9E-140 T 14-10-2018 MC28_2426 3e7a292f0b01fc5042f0089d1cc7c744 144 Pfam PF01047 MarR family 40 93 2.3E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2426 3e7a292f0b01fc5042f0089d1cc7c744 144 SUPERFAMILY SSF46785 7 144 9.9E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2426 3e7a292f0b01fc5042f0089d1cc7c744 144 Gene3D G3DSA:1.10.10.10 3 144 2.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2426 3e7a292f0b01fc5042f0089d1cc7c744 144 SMART SM00347 30 129 1.1E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2426 3e7a292f0b01fc5042f0089d1cc7c744 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 2.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2426 3e7a292f0b01fc5042f0089d1cc7c744 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 2.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2426 3e7a292f0b01fc5042f0089d1cc7c744 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 2.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_F093 0493d8183d2afd858dd4a239a118fec6 323 SUPERFAMILY SSF51412 15 309 4.73E-64 T 14-10-2018 MC28_F093 0493d8183d2afd858dd4a239a118fec6 323 Gene3D G3DSA:3.20.20.70 17 323 2.1E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_F093 0493d8183d2afd858dd4a239a118fec6 323 Pfam PF03060 Nitronate monooxygenase 18 317 1.5E-59 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 MC28_5346 c02b727502ec7204fd55f5f0cc2edd1b 324 Gene3D G3DSA:3.40.50.720 2 320 5.1E-105 T 14-10-2018 MC28_5346 c02b727502ec7204fd55f5f0cc2edd1b 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 243 1.3E-27 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_5346 c02b727502ec7204fd55f5f0cc2edd1b 324 SUPERFAMILY SSF51735 4 316 1.38E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1554 628f04d0a0d4cc68ad94f1988fcdd5f1 859 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 94 640 5.4E-179 T 14-10-2018 MC28_1554 628f04d0a0d4cc68ad94f1988fcdd5f1 859 Gene3D G3DSA:1.10.3810.10 94 287 2.4E-206 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_1554 628f04d0a0d4cc68ad94f1988fcdd5f1 859 SUPERFAMILY SSF53955 73 281 5.91E-74 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_1554 628f04d0a0d4cc68ad94f1988fcdd5f1 859 Gene3D G3DSA:3.90.1310.20 79 536 2.4E-206 T 14-10-2018 MC28_1554 628f04d0a0d4cc68ad94f1988fcdd5f1 859 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 636 1.2E-44 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_1554 628f04d0a0d4cc68ad94f1988fcdd5f1 859 Pfam PF00912 Transglycosylase 84 260 5.2E-65 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_1554 628f04d0a0d4cc68ad94f1988fcdd5f1 859 Gene3D G3DSA:3.40.710.10 326 650 2.4E-206 T 14-10-2018 MC28_1554 628f04d0a0d4cc68ad94f1988fcdd5f1 859 SUPERFAMILY SSF56601 245 656 1.11E-106 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_0842 6ef2634b389672383cfd235d291f78a5 128 SUPERFAMILY SSF53098 2 122 1.16E-31 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_0842 6ef2634b389672383cfd235d291f78a5 128 Pfam PF13456 Reverse transcriptase-like 7 124 4.9E-19 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 MC28_0842 6ef2634b389672383cfd235d291f78a5 128 Gene3D G3DSA:3.30.420.10 2 128 4.7E-30 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_4170 bd1411da75f26311a5af82eedcea3d50 168 SUPERFAMILY SSF54909 68 149 2.01E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_4170 bd1411da75f26311a5af82eedcea3d50 168 Gene3D G3DSA:3.30.70.920 57 155 5.4E-19 T 14-10-2018 MC28_4170 bd1411da75f26311a5af82eedcea3d50 168 Gene3D G3DSA:1.10.10.10 3 55 8.1E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4170 bd1411da75f26311a5af82eedcea3d50 168 SMART SM00344 7 118 0.007 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 MC28_4170 bd1411da75f26311a5af82eedcea3d50 168 Pfam PF01037 Lrp/AsnC ligand binding domain 73 146 5.2E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MC28_4170 bd1411da75f26311a5af82eedcea3d50 168 SUPERFAMILY SSF46785 7 62 4.68E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5154 c0801528e1b6d116348532342b52f1e8 198 Gene3D G3DSA:2.60.40.1240 58 185 4.3E-28 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily MC28_5154 c0801528e1b6d116348532342b52f1e8 198 Pfam PF11611 Domain of unknown function (DUF4352) 72 188 5.5E-24 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 Gene3D G3DSA:3.40.120.10 3 155 7.8E-62 T 14-10-2018 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 1.8E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 Gene3D G3DSA:3.40.120.10 173 362 1.9E-74 T 14-10-2018 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 368 1.5E-35 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 2.9E-188 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 2.3E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 2.3E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 2.3E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 SUPERFAMILY SSF53738 257 365 1.88E-33 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 Gene3D G3DSA:3.40.120.10 256 339 1.9E-74 T 14-10-2018 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 Gene3D G3DSA:3.30.310.50 370 447 1.9E-30 T 14-10-2018 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 3.6E-16 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 SUPERFAMILY SSF55957 357 446 2.62E-26 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 5.2E-16 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 SUPERFAMILY SSF53738 3 180 3.22E-46 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 45.477 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4869 fef47fc7c07b890031ee2c265720b10f 447 SUPERFAMILY SSF53738 158 256 2.47E-26 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 SUPERFAMILY SSF53597 153 365 2.78E-60 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 Gene3D G3DSA:3.40.430.10 145 370 1.6E-77 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 108 3.1E-20 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 16 364 1.2E-123 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 Pfam PF01872 RibD C-terminal domain 156 363 6.7E-57 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 154 367 8.7E-70 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 SUPERFAMILY SSF53927 12 153 1.84E-44 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 Gene3D G3DSA:3.40.140.10 5 144 2.5E-43 T 14-10-2018 MC28_3402 f0fdc1bb1fe57d92b6c8c381c0bb9e34 379 PIRSF PIRSF006769 7 371 6.7E-134 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 MC28_3079 a7cdb25ce22a19a9b4289b06052febbb 558 Pfam PF13684 Dihydroxyacetone kinase family 240 558 1.8E-121 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain MC28_3079 a7cdb25ce22a19a9b4289b06052febbb 558 Gene3D G3DSA:1.25.40.340 6 173 2.3E-10 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_3079 a7cdb25ce22a19a9b4289b06052febbb 558 SMART SM01120 36 201 5.3E-68 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_3079 a7cdb25ce22a19a9b4289b06052febbb 558 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 558 1.4E-209 T 14-10-2018 IPR019986 DAK2 domain-containing protein YloV MC28_3079 a7cdb25ce22a19a9b4289b06052febbb 558 Pfam PF02734 DAK2 domain 36 200 5.0E-40 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_3079 a7cdb25ce22a19a9b4289b06052febbb 558 SUPERFAMILY SSF101473 2 200 2.35E-44 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_3079 a7cdb25ce22a19a9b4289b06052febbb 558 SMART SM01121 240 558 8.8E-185 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain MC28_1446 0e82c850e8a2b2fdaf8c1ef4cbc912cb 406 Gene3D G3DSA:1.25.40.10 168 341 9.4E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1446 0e82c850e8a2b2fdaf8c1ef4cbc912cb 406 Pfam PF00535 Glycosyl transferase family 2 17 109 5.2E-8 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_1446 0e82c850e8a2b2fdaf8c1ef4cbc912cb 406 Gene3D G3DSA:3.90.550.10 1 114 2.7E-13 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1446 0e82c850e8a2b2fdaf8c1ef4cbc912cb 406 SUPERFAMILY SSF53448 13 113 3.0E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1446 0e82c850e8a2b2fdaf8c1ef4cbc912cb 406 SUPERFAMILY SSF48452 215 340 3.09E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3854 46e141a7aede13b9f3cc5f8350aa0982 167 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 72 6.1E-34 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 MC28_3854 46e141a7aede13b9f3cc5f8350aa0982 167 ProSitePatterns PS00938 Initiation factor 3 signature. 54 67 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 MC28_3854 46e141a7aede13b9f3cc5f8350aa0982 167 SUPERFAMILY SSF55200 78 167 2.88E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 MC28_3854 46e141a7aede13b9f3cc5f8350aa0982 167 Gene3D G3DSA:3.10.20.80 1 74 1.0E-34 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 MC28_3854 46e141a7aede13b9f3cc5f8350aa0982 167 Gene3D G3DSA:3.30.110.10 75 167 6.3E-38 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 MC28_3854 46e141a7aede13b9f3cc5f8350aa0982 167 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 79 164 2.2E-38 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 MC28_3854 46e141a7aede13b9f3cc5f8350aa0982 167 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 166 30.124 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 MC28_3854 46e141a7aede13b9f3cc5f8350aa0982 167 SUPERFAMILY SSF54364 2 74 3.4E-30 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 MC28_3854 46e141a7aede13b9f3cc5f8350aa0982 167 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 165 1.3E-76 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 MC28_3687 931f2737d6941c737ebfdb8cc3c11873 376 Gene3D G3DSA:2.40.30.10 284 375 3.3E-29 T 14-10-2018 MC28_3687 931f2737d6941c737ebfdb8cc3c11873 376 Gene3D G3DSA:3.40.50.620 4 218 5.2E-98 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3687 931f2737d6941c737ebfdb8cc3c11873 376 SUPERFAMILY SSF52402 12 249 2.43E-58 T 14-10-2018 MC28_3687 931f2737d6941c737ebfdb8cc3c11873 376 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 14 362 8.9E-138 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 MC28_3687 931f2737d6941c737ebfdb8cc3c11873 376 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 13 363 40.276 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 MC28_3687 931f2737d6941c737ebfdb8cc3c11873 376 Pfam PF03054 tRNA methyl transferase 14 362 7.7E-145 T 14-10-2018 MC28_3687 931f2737d6941c737ebfdb8cc3c11873 376 Gene3D G3DSA:2.30.30.280 219 282 2.2E-22 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 MC28_0540 d9833ad232705577311f95ff23d451db 61 Gene3D G3DSA:1.10.8.910 5 61 3.5E-29 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily MC28_0540 d9833ad232705577311f95ff23d451db 61 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 59 1.8E-22 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 MC28_0540 d9833ad232705577311f95ff23d451db 61 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 20 29 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_0540 d9833ad232705577311f95ff23d451db 61 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 38 52 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_3261 82925539dc66869b3f77d887ba098224 396 Pfam PF00676 Dehydrogenase E1 component 78 368 1.0E-102 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 MC28_3261 82925539dc66869b3f77d887ba098224 396 Gene3D G3DSA:3.40.50.970 30 396 2.4E-122 T 14-10-2018 MC28_3261 82925539dc66869b3f77d887ba098224 396 SUPERFAMILY SSF52518 43 391 4.72E-101 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_3261 82925539dc66869b3f77d887ba098224 396 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 50 389 1.7E-141 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 MC28_4780 84a54d9208d73992ed0cd0282e0e6c26 262 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 249 1.2E-87 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 MC28_4780 84a54d9208d73992ed0cd0282e0e6c26 262 Gene3D G3DSA:3.30.420.40 1 88 2.2E-36 T 14-10-2018 MC28_4780 84a54d9208d73992ed0cd0282e0e6c26 262 Gene3D G3DSA:3.30.420.40 89 262 2.7E-65 T 14-10-2018 MC28_4780 84a54d9208d73992ed0cd0282e0e6c26 262 Pfam PF03309 Type III pantothenate kinase 3 206 2.2E-75 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 MC28_4780 84a54d9208d73992ed0cd0282e0e6c26 262 SUPERFAMILY SSF53067 124 253 1.04E-41 T 14-10-2018 MC28_4780 84a54d9208d73992ed0cd0282e0e6c26 262 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 38.241 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 MC28_4780 84a54d9208d73992ed0cd0282e0e6c26 262 SUPERFAMILY SSF53067 1 122 9.84E-40 T 14-10-2018 MC28_0012 7554cdde81b55e2963946df8a9dedade 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 248 5.7E-107 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 MC28_0012 7554cdde81b55e2963946df8a9dedade 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 41.807 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 MC28_0012 7554cdde81b55e2963946df8a9dedade 256 SUPERFAMILY SSF110399 1 239 1.44E-80 T 14-10-2018 MC28_0012 7554cdde81b55e2963946df8a9dedade 256 Gene3D G3DSA:3.20.20.70 1 256 1.7E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_5034 7b0f9643e64c3c763a143ce1c4f5f789 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 1.4E-22 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MC28_5034 7b0f9643e64c3c763a143ce1c4f5f789 96 Gene3D G3DSA:1.10.20.60 2 94 6.6E-32 T 14-10-2018 MC28_5034 7b0f9643e64c3c763a143ce1c4f5f789 96 SUPERFAMILY SSF141000 4 94 5.62E-32 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 MC28_5034 7b0f9643e64c3c763a143ce1c4f5f789 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 5.1E-33 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MC28_5034 7b0f9643e64c3c763a143ce1c4f5f789 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 25.744 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MC28_0064 ea586f22e77b4e260af551d70ec8d288 407 Gene3D G3DSA:1.20.1250.20 17 394 9.4E-58 T 14-10-2018 MC28_0064 ea586f22e77b4e260af551d70ec8d288 407 SUPERFAMILY SSF103473 20 399 2.35E-64 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0064 ea586f22e77b4e260af551d70ec8d288 407 Pfam PF03209 PUCC protein 284 401 7.2E-5 T 14-10-2018 IPR004896 PucC-related MC28_0064 ea586f22e77b4e260af551d70ec8d288 407 Pfam PF07690 Major Facilitator Superfamily 27 245 4.3E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2838 dba7e4564c962a47dd6bffa5a56b5dd8 93 SUPERFAMILY SSF46785 1 89 5.46E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2838 dba7e4564c962a47dd6bffa5a56b5dd8 93 Gene3D G3DSA:1.10.10.10 1 92 3.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2838 dba7e4564c962a47dd6bffa5a56b5dd8 93 Pfam PF03551 Transcriptional regulator PadR-like family 1 69 2.9E-21 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 Pfam PF06280 Fn3-like domain 736 809 1.0E-6 T 14-10-2018 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 SUPERFAMILY SSF63446 1320 1375 1.44E-7 T 14-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 SUPERFAMILY SSF52025 460 550 3.01E-16 T 14-10-2018 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 Pfam PF00082 Subtilase family 216 665 1.7E-66 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 Pfam PF05922 Peptidase inhibitor I9 83 183 1.2E-8 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 SUPERFAMILY SSF52743 200 675 9.43E-85 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 Pfam PF02225 PA domain 463 537 5.6E-17 T 14-10-2018 IPR003137 PA domain MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 Gene3D G3DSA:3.50.30.30 446 547 1.1E-32 T 14-10-2018 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 Gene3D G3DSA:3.40.50.200 548 681 2.6E-30 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 221 232 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 PIRSF PIRSF037844 1 1407 0.0 T 14-10-2018 IPR017292 Peptidase S8A, Vpr MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 Gene3D G3DSA:2.60.40.4130 1229 1386 2.9E-13 T 14-10-2018 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 297 307 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 Gene3D G3DSA:3.40.50.200 176 445 1.6E-51 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 PRINTS PR00723 Subtilisin serine protease family (S8) signature 216 235 5.4E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 PRINTS PR00723 Subtilisin serine protease family (S8) signature 293 306 5.4E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 PRINTS PR00723 Subtilisin serine protease family (S8) signature 614 630 5.4E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_4159 5d0100d62470c56d35c7977b6581fdd7 1407 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 615 625 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_G008 87c0c9871d48b6c2a2d105e4471f38fe 341 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 123 2.4E-27 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 MC28_G008 87c0c9871d48b6c2a2d105e4471f38fe 341 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 234 4.4E-8 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 MC28_G008 87c0c9871d48b6c2a2d105e4471f38fe 341 SUPERFAMILY SSF51735 4 149 5.49E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_G008 87c0c9871d48b6c2a2d105e4471f38fe 341 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 4 331 4.4E-139 T 14-10-2018 IPR030827 Inositol 2-dehydrogenase MC28_G008 87c0c9871d48b6c2a2d105e4471f38fe 341 SUPERFAMILY SSF55347 128 297 1.07E-34 T 14-10-2018 MC28_G008 87c0c9871d48b6c2a2d105e4471f38fe 341 Gene3D G3DSA:3.30.360.10 124 319 6.4E-107 T 14-10-2018 MC28_G008 87c0c9871d48b6c2a2d105e4471f38fe 341 Gene3D G3DSA:3.40.50.720 5 305 6.4E-107 T 14-10-2018 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 SUPERFAMILY SSF56645 4 220 6.41E-38 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 217 7.4E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 PIRSF PIRSF016578 2 107 1.2E-11 T 14-10-2018 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 PIRSF PIRSF016578 139 381 3.7E-15 T 14-10-2018 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 Gene3D G3DSA:2.40.110.10 135 224 5.8E-19 T 14-10-2018 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 SUPERFAMILY SSF47203 240 380 8.05E-23 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 Gene3D G3DSA:1.10.540.10 4 108 6.8E-19 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 95 3.6E-9 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 245 360 2.3E-13 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 MC28_2276 f36726c4442f6452f45238cd6a370c91 382 Gene3D G3DSA:1.20.140.10 240 379 2.0E-25 T 14-10-2018 MC28_0059 6908b7aff5c988b5f5d1e31894bf614f 332 Pfam PF00107 Zinc-binding dehydrogenase 164 287 4.0E-17 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MC28_0059 6908b7aff5c988b5f5d1e31894bf614f 332 SUPERFAMILY SSF51735 121 295 2.44E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0059 6908b7aff5c988b5f5d1e31894bf614f 332 Gene3D G3DSA:3.40.50.720 131 299 1.7E-118 T 14-10-2018 MC28_0059 6908b7aff5c988b5f5d1e31894bf614f 332 SMART SM00829 14 329 4.3E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_0059 6908b7aff5c988b5f5d1e31894bf614f 332 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 7 331 1.8E-139 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI MC28_0059 6908b7aff5c988b5f5d1e31894bf614f 332 SUPERFAMILY SSF50129 7 148 2.59E-41 T 14-10-2018 IPR011032 GroES-like superfamily MC28_0059 6908b7aff5c988b5f5d1e31894bf614f 332 Gene3D G3DSA:3.90.180.10 24 329 1.7E-118 T 14-10-2018 MC28_0059 6908b7aff5c988b5f5d1e31894bf614f 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 92 5.4E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_1851 062be8d40f387084236626d5a7b9c274 177 Pfam PF01569 PAP2 superfamily 37 144 5.6E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MC28_1851 062be8d40f387084236626d5a7b9c274 177 Gene3D G3DSA:1.20.144.10 64 156 3.0E-17 T 14-10-2018 MC28_1851 062be8d40f387084236626d5a7b9c274 177 SMART SM00014 36 143 2.7E-14 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MC28_1851 062be8d40f387084236626d5a7b9c274 177 SUPERFAMILY SSF48317 5 166 3.66E-32 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily MC28_2266 ca42c581042ce9f71085288e50557bff 253 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 247 47.282 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 MC28_2266 ca42c581042ce9f71085288e50557bff 253 Gene3D G3DSA:3.20.20.370 2 253 2.7E-105 T 14-10-2018 MC28_2266 ca42c581042ce9f71085288e50557bff 253 SUPERFAMILY SSF88713 3 250 2.82E-101 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_2266 ca42c581042ce9f71085288e50557bff 253 Pfam PF03746 LamB/YcsF family 4 242 5.5E-104 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 Pfam PF00555 delta endotoxin 304 504 1.1E-33 T 14-10-2018 IPR001178 Pesticidal crystal protein, central domain GO:0005102|GO:0009405 MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 Gene3D G3DSA:2.100.10.10 310 502 2.3E-91 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 SUPERFAMILY SSF49785 506 647 2.38E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 Pfam PF03944 delta endotoxin 514 647 2.1E-32 T 14-10-2018 IPR005638 Pesticidal crystal protein, C-terminal GO:0090729 MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 SUPERFAMILY SSF51096 299 504 1.92E-36 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 Gene3D G3DSA:1.20.190.10 68 298 7.7E-68 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 Pfam PF03945 delta endotoxin, N-terminal domain 73 296 2.9E-20 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 SUPERFAMILY SSF56849 40 296 3.92E-63 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 Gene3D G3DSA:2.60.120.260 1026 1153 8.5E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 Gene3D G3DSA:2.60.120.260 305 647 2.3E-91 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C067 7a6f2dc9063e108c4261a2c295005d72 1211 SUPERFAMILY SSF49785 1026 1151 2.41E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_2569 b4a28632c4211459a1e77ca39766bde1 497 SUPERFAMILY SSF56801 3 494 8.11E-135 T 14-10-2018 MC28_2569 b4a28632c4211459a1e77ca39766bde1 497 Pfam PF13193 AMP-binding enzyme C-terminal domain 411 484 3.3E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_2569 b4a28632c4211459a1e77ca39766bde1 497 Gene3D G3DSA:3.30.300.310 397 495 1.3E-29 T 14-10-2018 MC28_2569 b4a28632c4211459a1e77ca39766bde1 497 Gene3D G3DSA:3.40.50.12780 1 394 3.8E-106 T 14-10-2018 MC28_2569 b4a28632c4211459a1e77ca39766bde1 497 Pfam PF00501 AMP-binding enzyme 6 401 1.0E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_2569 b4a28632c4211459a1e77ca39766bde1 497 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_1391 a416e661fb2e80ac6a32378fe76f8195 502 Pfam PF02128 Fungalysin metallopeptidase (M36) 332 500 1.0E-13 T 14-10-2018 IPR001842 Peptidase M36, fungalysin GO:0004222|GO:0005615|GO:0008270 MC28_1391 a416e661fb2e80ac6a32378fe76f8195 502 SUPERFAMILY SSF55486 269 499 4.58E-40 T 14-10-2018 MC28_1391 a416e661fb2e80ac6a32378fe76f8195 502 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 74 103 1.3E-6 T 14-10-2018 IPR011096 FTP domain MC28_1391 a416e661fb2e80ac6a32378fe76f8195 502 Pfam PF03413 Peptidase propeptide and YPEB domain 121 191 1.1E-7 T 14-10-2018 IPR025711 PepSY domain MC28_1391 a416e661fb2e80ac6a32378fe76f8195 502 Gene3D G3DSA:1.10.390.10 361 502 9.9E-10 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 Gene3D G3DSA:3.30.420.40 153 316 3.6E-131 T 14-10-2018 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 Pfam PF06723 MreB/Mbl protein 9 334 7.2E-152 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 Gene3D G3DSA:3.90.640.10 185 258 3.6E-131 T 14-10-2018 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 SUPERFAMILY SSF53067 8 146 3.11E-39 T 14-10-2018 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 Gene3D G3DSA:3.30.420.40 11 326 3.6E-131 T 14-10-2018 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 SUPERFAMILY SSF53067 149 332 5.13E-51 T 14-10-2018 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 3.1E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 3.1E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 186 206 3.1E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 299 325 3.1E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 131 150 3.1E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_3744 f7ede945fc0f0f968a0ee9c28e2e3af4 339 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 335 9.2E-161 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 SUPERFAMILY SSF58104 171 374 3.27E-5 T 14-10-2018 MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 204 231 1.4E-6 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 667 694 8.3E-8 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 288 314 2.7E-4 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 695 722 4.9E-8 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 639 666 4.6E-7 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 611 638 2.6E-5 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 588 610 2.3E-4 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 597 624 1.0E-4 T 14-10-2018 IPR023908 xxxLxxG heptad repeat MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 Pfam PF12698 ABC-2 family transporter protein 768 955 1.8E-16 T 14-10-2018 MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 Pfam PF12698 ABC-2 family transporter protein 25 171 5.7E-15 T 14-10-2018 MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 173 8.8E-61 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 762 965 1.3E-66 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal MC28_0313 35d27c41fb93f0450654592a99c90f5c 980 SUPERFAMILY SSF101967 596 730 1.83E-9 T 14-10-2018 MC28_G308 94086f030e382f25ce5bfdf5cb72d66f 326 Pfam PF07859 alpha/beta hydrolase fold 91 299 7.6E-66 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 MC28_G308 94086f030e382f25ce5bfdf5cb72d66f 326 Gene3D G3DSA:3.40.50.1820 17 325 1.2E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_G308 94086f030e382f25ce5bfdf5cb72d66f 326 SUPERFAMILY SSF53474 48 323 4.91E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2144 99b8806879fffd10f678843ea744e86d 1160 SUPERFAMILY SSF52467 12 206 8.72E-14 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_2144 99b8806879fffd10f678843ea744e86d 1160 Pfam PF13289 SIR2-like domain 110 236 1.1E-16 T 14-10-2018 IPR039444 SIR2-like domain MC28_2144 99b8806879fffd10f678843ea744e86d 1160 Pfam PF13212 Domain of unknown function (DUF4020) 971 1146 4.6E-62 T 14-10-2018 IPR025093 Domain of unknown function DUF4020 MC28_4745 837c31811ae5ba3c19151a375c0407aa 208 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 4.2E-59 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 MC28_4745 837c31811ae5ba3c19151a375c0407aa 208 SUPERFAMILY SSF52540 1 206 2.83E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4745 837c31811ae5ba3c19151a375c0407aa 208 Gene3D G3DSA:3.40.50.300 1 207 4.2E-65 T 14-10-2018 MC28_4745 837c31811ae5ba3c19151a375c0407aa 208 Pfam PF02223 Thymidylate kinase 8 198 1.4E-49 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 MC28_4745 837c31811ae5ba3c19151a375c0407aa 208 Hamap MF_00165 Thymidylate kinase [tmk]. 4 207 30.419 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 MC28_4745 837c31811ae5ba3c19151a375c0407aa 208 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 Pfam PF08239 Bacterial SH3 domain 126 176 1.5E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 Pfam PF08239 Bacterial SH3 domain 54 104 2.6E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 Pfam PF08239 Bacterial SH3 domain 202 252 5.6E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 SMART SM00287 45 107 1.2E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 SMART SM00287 117 178 6.1E-13 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 SMART SM00287 194 253 8.5E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 Gene3D G3DSA:2.30.30.40 196 250 5.1E-16 T 14-10-2018 MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 SUPERFAMILY SSF50044 144 177 2.17E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 Gene3D G3DSA:2.30.30.40 117 184 6.9E-18 T 14-10-2018 MC28_1079 d95eaba66ea3c66af8280e93eec2e774 255 Gene3D G3DSA:2.30.30.40 45 113 8.2E-18 T 14-10-2018 MC28_0075 ef43cc5d8581e1903cfb7531103a7326 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 366 3.0E-33 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 MC28_0075 ef43cc5d8581e1903cfb7531103a7326 367 Gene3D G3DSA:2.40.50.100 74 210 1.7E-18 T 14-10-2018 MC28_0075 ef43cc5d8581e1903cfb7531103a7326 367 Gene3D G3DSA:1.10.287.470 95 168 1.7E-18 T 14-10-2018 MC28_0075 ef43cc5d8581e1903cfb7531103a7326 367 Pfam PF13437 HlyD family secretion protein 182 280 2.6E-8 T 14-10-2018 MC28_0075 ef43cc5d8581e1903cfb7531103a7326 367 Gene3D G3DSA:2.40.30.170 211 280 1.7E-18 T 14-10-2018 MC28_0075 ef43cc5d8581e1903cfb7531103a7326 367 Gene3D G3DSA:2.40.420.20 282 366 2.8E-13 T 14-10-2018 MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 Pfam PF00202 Aminotransferase class-III 14 378 1.6E-123 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 4 381 68.136 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 Gene3D G3DSA:3.90.1150.10 18 370 5.1E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 Gene3D G3DSA:3.40.640.10 48 287 5.1E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 PIRSF PIRSF000521 4 114 7.8E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 PIRSF PIRSF000521 155 381 5.1E-41 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 PIRSF PIRSF000521 108 150 0.02 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 SUPERFAMILY SSF53383 4 378 2.09E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 205 242 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_3421 9ee6333b5f63bbc37e6c3d33d8eca227 386 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 378 4.6E-151 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 Gene3D G3DSA:2.40.500.20 182 301 7.7E-45 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 SUPERFAMILY SSF46609 98 182 1.31E-31 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 102 182 3.6E-28 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 Gene3D G3DSA:1.10.287.990 119 181 1.9E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 258 265 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 189 291 1.5E-35 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 PRINTS PR01703 Manganese superoxide dismutase signature 218 226 2.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 PRINTS PR01703 Manganese superoxide dismutase signature 126 139 2.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 PRINTS PR01703 Manganese superoxide dismutase signature 165 178 2.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 PRINTS PR01703 Manganese superoxide dismutase signature 256 268 2.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 PRINTS PR01703 Manganese superoxide dismutase signature 105 116 2.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0703 fee840181efc7d7124b0d11f756f87fd 303 SUPERFAMILY SSF54719 181 295 9.82E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 MC28_0926 c26010999e8c011d377ac36a2a0a911f 59 Pfam PF08141 Small acid-soluble spore protein H family 1 58 2.3E-22 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 MC28_0926 c26010999e8c011d377ac36a2a0a911f 59 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 1 58 1.9E-28 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 MC28_0926 c26010999e8c011d377ac36a2a0a911f 59 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 58 1.0E-26 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 MC28_0926 c26010999e8c011d377ac36a2a0a911f 59 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 1 59 19.075 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 MC28_1400 43ea50813e9af94674ff576280e80f64 403 SUPERFAMILY SSF56796 8 391 7.98E-125 T 14-10-2018 MC28_1400 43ea50813e9af94674ff576280e80f64 403 Pfam PF00465 Iron-containing alcohol dehydrogenase 13 381 8.9E-126 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 MC28_1400 43ea50813e9af94674ff576280e80f64 403 Gene3D G3DSA:1.20.1090.10 190 392 1.1E-64 T 14-10-2018 MC28_1400 43ea50813e9af94674ff576280e80f64 403 Gene3D G3DSA:3.40.50.1970 2 188 3.8E-62 T 14-10-2018 MC28_1400 43ea50813e9af94674ff576280e80f64 403 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 MC28_3859 bc1997e44577a0bd3cbb825e2c1df7d0 141 Pfam PF03477 ATP cone domain 38 124 1.4E-20 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 MC28_3859 bc1997e44577a0bd3cbb825e2c1df7d0 141 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 141 79.621 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MC28_3859 bc1997e44577a0bd3cbb825e2c1df7d0 141 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 134 2.6E-60 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MC28_2994 feb5da12edcf32fb15e5a79e5205eead 116 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 14 114 8.6E-13 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor MC28_2994 feb5da12edcf32fb15e5a79e5205eead 116 Gene3D G3DSA:2.40.10.270 10 116 4.0E-23 T 14-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily MC28_2994 feb5da12edcf32fb15e5a79e5205eead 116 Pfam PF05521 Phage head-tail joining protein 16 111 1.5E-19 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor MC28_F066 4fb81e9874b7614e7648c58ab312a681 481 Gene3D G3DSA:3.30.565.10 2 173 3.4E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_F066 4fb81e9874b7614e7648c58ab312a681 481 SUPERFAMILY SSF55874 4 149 7.74E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2637 e7a5182f52fabcbbae7d0b867d41183e 597 Gene3D G3DSA:1.10.287.830 182 227 5.9E-16 T 14-10-2018 MC28_2637 e7a5182f52fabcbbae7d0b867d41183e 597 Gene3D G3DSA:1.10.1370.20 229 597 3.8E-128 T 14-10-2018 MC28_2637 e7a5182f52fabcbbae7d0b867d41183e 597 Gene3D G3DSA:1.20.140.70 27 180 5.3E-41 T 14-10-2018 MC28_2637 e7a5182f52fabcbbae7d0b867d41183e 597 Pfam PF01432 Peptidase family M3 205 585 6.7E-68 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 MC28_2637 e7a5182f52fabcbbae7d0b867d41183e 597 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 11 595 6.5E-180 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 MC28_2637 e7a5182f52fabcbbae7d0b867d41183e 597 SUPERFAMILY SSF55486 7 581 4.29E-116 T 14-10-2018 MC28_2637 e7a5182f52fabcbbae7d0b867d41183e 597 Pfam PF08439 Oligopeptidase F 116 184 1.6E-17 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain MC28_1196 6396ddaab22527d28d660ea31fe00473 48 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 18 40 2.0E-11 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_1196 6396ddaab22527d28d660ea31fe00473 48 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 20 42 2.7E-10 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 PIRSF PIRSF000538 2 496 2.1E-182 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 59.906 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 493 5.0E-229 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 1.4E-63 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 Gene3D G3DSA:3.30.420.40 253 496 2.0E-89 T 14-10-2018 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 SUPERFAMILY SSF53067 3 254 5.44E-99 T 14-10-2018 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 SUPERFAMILY SSF53067 254 491 1.11E-85 T 14-10-2018 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 Gene3D G3DSA:3.30.420.40 1 252 4.0E-115 T 14-10-2018 MC28_0268 adbecb62948901d0aaeed9c18527d7a4 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 1.2E-91 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 MC28_2955 21e51f83c8915dbb8f256470afae2753 82 Pfam PF11588 Protein of unknown function (DUF3243) 3 80 2.0E-33 T 14-10-2018 IPR021637 Protein of unknown function DUF3243 MC28_2955 21e51f83c8915dbb8f256470afae2753 82 Gene3D G3DSA:1.10.760.20 1 82 5.2E-31 T 14-10-2018 IPR038292 YmfJ/YflH superfamily MC28_2955 21e51f83c8915dbb8f256470afae2753 82 PIRSF PIRSF004764 1 82 5.3E-25 T 14-10-2018 IPR024702 Uncharacterised conserved protein YmfJ MC28_1372 97cf5ba7acea954ff0fb122abfe0f75d 91 Pfam PF04232 Stage V sporulation protein S (SpoVS) 4 84 1.0E-37 T 14-10-2018 IPR007347 Sporulation stage V, protein S MC28_1372 97cf5ba7acea954ff0fb122abfe0f75d 91 Gene3D G3DSA:3.30.110.20 1 88 1.7E-33 T 14-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 MC28_1372 97cf5ba7acea954ff0fb122abfe0f75d 91 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 4 87 5.0E-37 T 14-10-2018 IPR007347 Sporulation stage V, protein S MC28_4973 28ced2e8f20ef32cf4d768c69434426b 325 SUPERFAMILY SSF53474 72 323 3.89E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4973 28ced2e8f20ef32cf4d768c69434426b 325 Pfam PF12146 Serine aminopeptidase, S33 108 192 1.8E-14 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 MC28_4973 28ced2e8f20ef32cf4d768c69434426b 325 Gene3D G3DSA:3.40.50.1820 77 323 1.6E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4973 28ced2e8f20ef32cf4d768c69434426b 325 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 146 3.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_4973 28ced2e8f20ef32cf4d768c69434426b 325 PRINTS PR00111 Alpha/beta hydrolase fold signature 178 191 3.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3076 226ed48522d9fff6a4fc00687d161e35 330 SUPERFAMILY SSF53659 1 326 8.22E-106 T 14-10-2018 MC28_3076 226ed48522d9fff6a4fc00687d161e35 330 Gene3D G3DSA:3.40.718.10 1 329 7.8E-138 T 14-10-2018 MC28_3076 226ed48522d9fff6a4fc00687d161e35 330 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 330 152.747 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 MC28_3076 226ed48522d9fff6a4fc00687d161e35 330 Pfam PF02504 Fatty acid synthesis protein 1 317 5.3E-127 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 MC28_3076 226ed48522d9fff6a4fc00687d161e35 330 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 326 1.7E-135 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 MC28_3076 226ed48522d9fff6a4fc00687d161e35 330 PIRSF PIRSF002465 1 329 2.6E-130 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 MC28_0221 79866c377bd95c29a62965baddf5af9e 170 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site MC28_0221 79866c377bd95c29a62965baddf5af9e 170 Pfam PF02082 Transcriptional regulator 1 83 4.0E-27 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type MC28_0221 79866c377bd95c29a62965baddf5af9e 170 Gene3D G3DSA:1.10.10.10 1 150 2.5E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0221 79866c377bd95c29a62965baddf5af9e 170 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 142 6.7E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type MC28_0221 79866c377bd95c29a62965baddf5af9e 170 SUPERFAMILY SSF46785 3 147 7.8E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2875 b543e0fc0989d2044a5b66b771b542f5 248 Pfam PF13276 HTH-like domain 8 63 2.4E-22 T 14-10-2018 IPR025948 HTH-like domain MC28_2875 b543e0fc0989d2044a5b66b771b542f5 248 SUPERFAMILY SSF53098 81 242 1.67E-31 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_2875 b543e0fc0989d2044a5b66b771b542f5 248 Pfam PF00665 Integrase core domain 86 200 2.0E-23 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 MC28_2875 b543e0fc0989d2044a5b66b771b542f5 248 Gene3D G3DSA:3.30.420.10 80 231 8.9E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_2675 b543e0fc0989d2044a5b66b771b542f5 248 Pfam PF13276 HTH-like domain 8 63 2.4E-22 T 14-10-2018 IPR025948 HTH-like domain MC28_2675 b543e0fc0989d2044a5b66b771b542f5 248 SUPERFAMILY SSF53098 81 242 1.67E-31 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_2675 b543e0fc0989d2044a5b66b771b542f5 248 Pfam PF00665 Integrase core domain 86 200 2.0E-23 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 MC28_2675 b543e0fc0989d2044a5b66b771b542f5 248 Gene3D G3DSA:3.30.420.10 80 231 8.9E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_2216 97679d168309511dcaab464041b49c96 132 Gene3D G3DSA:3.40.1580.10 1 111 1.1E-10 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily MC28_2216 97679d168309511dcaab464041b49c96 132 SUPERFAMILY SSF160631 2 118 8.37E-22 T 14-10-2018 MC28_2216 97679d168309511dcaab464041b49c96 132 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 2 104 4.4E-8 T 14-10-2018 IPR018958 Knr4/Smi1-like domain MC28_2256 18388165481fd8b2f6ce7f0f05434e59 253 Pfam PF08241 Methyltransferase domain 56 142 3.6E-7 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_2256 18388165481fd8b2f6ce7f0f05434e59 253 Gene3D G3DSA:3.40.50.150 46 199 4.3E-13 T 14-10-2018 MC28_2256 18388165481fd8b2f6ce7f0f05434e59 253 SUPERFAMILY SSF53335 34 232 2.81E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0134 de9a650fe5fa1ed9362481f3af62fffb 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_0134 de9a650fe5fa1ed9362481f3af62fffb 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 1.1E-22 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 MC28_0134 de9a650fe5fa1ed9362481f3af62fffb 67 Gene3D G3DSA:1.10.8.910 8 67 7.6E-31 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily MC28_0134 de9a650fe5fa1ed9362481f3af62fffb 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_3496 0902819fda9f51d935df726c0933bccb 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 182 2.2E-44 T 14-10-2018 MC28_3496 0902819fda9f51d935df726c0933bccb 220 Gene3D G3DSA:1.10.150.240 14 82 8.5E-54 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_3496 0902819fda9f51d935df726c0933bccb 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 3 182 9.7E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_3496 0902819fda9f51d935df726c0933bccb 220 Gene3D G3DSA:3.40.50.1000 2 200 8.5E-54 T 14-10-2018 IPR023214 HAD superfamily MC28_3496 0902819fda9f51d935df726c0933bccb 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 1.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_3496 0902819fda9f51d935df726c0933bccb 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 126 142 1.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_3496 0902819fda9f51d935df726c0933bccb 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 164 1.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_3496 0902819fda9f51d935df726c0933bccb 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 1.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_3496 0902819fda9f51d935df726c0933bccb 220 SUPERFAMILY SSF56784 1 213 4.27E-51 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3496 0902819fda9f51d935df726c0933bccb 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 82 157 9.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_4537 82830177d996191a95a3a9f3c0600584 122 Gene3D G3DSA:1.20.58.1610 1 121 1.3E-43 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4537 82830177d996191a95a3a9f3c0600584 122 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 121 7.9E-38 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4537 82830177d996191a95a3a9f3c0600584 122 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 5 122 19.664 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 MC28_5333 d3917878473638315410eea773e50907 128 SUPERFAMILY SSF54593 1 127 1.21E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_5333 d3917878473638315410eea773e50907 128 Gene3D G3DSA:3.10.180.10 8 127 9.4E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_5333 d3917878473638315410eea773e50907 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 5.2E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_1197 6deb5fc2ba29f73086a8bf52a6d61e2c 250 Pfam PF09234 Domain of unknown function (DUF1963) 44 248 2.4E-36 T 14-10-2018 IPR015315 Protein of unknown function DUF1963 MC28_1197 6deb5fc2ba29f73086a8bf52a6d61e2c 250 Gene3D G3DSA:2.30.320.10 9 248 9.2E-34 T 14-10-2018 IPR035948 YwqG-like superfamily MC28_1197 6deb5fc2ba29f73086a8bf52a6d61e2c 250 SUPERFAMILY SSF103032 15 250 3.01E-57 T 14-10-2018 IPR035948 YwqG-like superfamily MC28_0619 d2870a3e0d071e69e73a567baa86ef87 452 PIRSF PIRSF006603 1 452 3.1E-74 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0619 d2870a3e0d071e69e73a567baa86ef87 452 Pfam PF01554 MatE 20 180 3.2E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0619 d2870a3e0d071e69e73a567baa86ef87 452 Pfam PF01554 MatE 247 408 5.8E-37 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0619 d2870a3e0d071e69e73a567baa86ef87 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 3.1E-107 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 Pfam PF07499 RuvA, C-terminal domain 150 192 4.8E-12 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 Gene3D G3DSA:2.40.50.140 1 55 2.9E-14 T 14-10-2018 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 SUPERFAMILY SSF47781 55 127 1.47E-20 T 14-10-2018 IPR010994 RuvA domain 2-like MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 Pfam PF14520 Helix-hairpin-helix domain 62 119 3.3E-15 T 14-10-2018 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 3.6E-56 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 Pfam PF01330 RuvA N terminal domain 1 52 1.2E-16 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 SUPERFAMILY SSF50249 2 53 3.77E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 3 193 26.6 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 SUPERFAMILY SSF46929 150 192 4.05E-10 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 Gene3D G3DSA:1.10.150.20 57 132 6.4E-24 T 14-10-2018 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 SMART SM00278 63 82 0.38 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 SMART SM00278 98 117 2.1 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_3713 8ce16ddf684b17c4843f55c16414f883 197 Gene3D G3DSA:1.10.8.10 146 192 8.7E-9 T 14-10-2018 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 11 1239 20.119 T 14-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 Pfam PF00580 UvrD/REP helicase N-terminal domain 14 465 9.0E-82 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 SUPERFAMILY SSF52980 1018 1233 3.97E-39 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 Pfam PF13361 UvrD-like helicase C-terminal domain 476 889 3.2E-30 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 Gene3D G3DSA:3.90.320.10 998 1239 2.3E-80 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal MC28_0358 f548ced4e880751b263d993b80f398fa 1241 Gene3D G3DSA:3.40.50.300 763 967 1.7E-48 T 14-10-2018 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 Gene3D G3DSA:3.40.50.300 479 762 9.0E-60 T 14-10-2018 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 Gene3D G3DSA:3.40.50.300 6 211 2.9E-40 T 14-10-2018 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 Gene3D G3DSA:3.40.50.300 352 478 2.0E-31 T 14-10-2018 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1058 1231 1.8E-9 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type MC28_0358 f548ced4e880751b263d993b80f398fa 1241 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 13 1238 0.0 T 14-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 MC28_0358 f548ced4e880751b263d993b80f398fa 1241 SUPERFAMILY SSF52540 7 893 1.42E-115 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0968 d0ceb48b4066562342ee9bfe0b9ca6c1 232 Pfam PF03575 Peptidase family S51 3 203 2.5E-57 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 MC28_0968 d0ceb48b4066562342ee9bfe0b9ca6c1 232 SUPERFAMILY SSF52317 1 204 3.02E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0968 d0ceb48b4066562342ee9bfe0b9ca6c1 232 Gene3D G3DSA:3.40.50.880 11 220 2.0E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4487 fdcd96731b18352a08f8fd4381c15763 226 SMART SM00382 30 217 8.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4487 fdcd96731b18352a08f8fd4381c15763 226 Gene3D G3DSA:3.40.50.300 1 225 4.7E-67 T 14-10-2018 MC28_4487 fdcd96731b18352a08f8fd4381c15763 226 SUPERFAMILY SSF52540 1 222 5.95E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4487 fdcd96731b18352a08f8fd4381c15763 226 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4487 fdcd96731b18352a08f8fd4381c15763 226 Pfam PF00005 ABC transporter 21 169 1.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0606 4d0fdb155fca348888af3f62e1a658ba 79 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 5 77 1.4E-35 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 MC28_0606 4d0fdb155fca348888af3f62e1a658ba 79 Hamap MF_00565 D-alanyl carrier protein [dltC]. 1 79 45.497 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 MC28_0606 4d0fdb155fca348888af3f62e1a658ba 79 SUPERFAMILY SSF47336 2 77 2.36E-13 T 14-10-2018 IPR036736 ACP-like superfamily MC28_0606 4d0fdb155fca348888af3f62e1a658ba 79 Pfam PF00550 Phosphopantetheine attachment site 6 71 9.6E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain MC28_0606 4d0fdb155fca348888af3f62e1a658ba 79 Gene3D G3DSA:1.10.1200.10 2 79 1.5E-21 T 14-10-2018 IPR036736 ACP-like superfamily MC28_0631 14931c275daf9827d92e7088295b167f 77 Hamap MF_00506 UPF0180 protein . 1 77 24.928 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 MC28_0631 14931c275daf9827d92e7088295b167f 77 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 2 45 5.0E-17 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 MC28_0631 14931c275daf9827d92e7088295b167f 77 Pfam PF03698 Uncharacterised protein family (UPF0180) 5 76 9.2E-28 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 MC28_1643 d7b95e8d3aadff7cf1bab9e08940b2be 296 Pfam PF03466 LysR substrate binding domain 96 294 7.5E-36 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_1643 d7b95e8d3aadff7cf1bab9e08940b2be 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1643 d7b95e8d3aadff7cf1bab9e08940b2be 296 Gene3D G3DSA:1.10.10.10 9 97 6.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1643 d7b95e8d3aadff7cf1bab9e08940b2be 296 SUPERFAMILY SSF46785 4 117 1.87E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1643 d7b95e8d3aadff7cf1bab9e08940b2be 296 SUPERFAMILY SSF53850 96 294 4.1E-33 T 14-10-2018 MC28_1643 d7b95e8d3aadff7cf1bab9e08940b2be 296 Gene3D G3DSA:3.40.190.290 98 295 2.1E-31 T 14-10-2018 MC28_0042 c7ef9f71cab9b78ae721cf9d6f8f8f56 194 PIRSF PIRSF000232 11 194 2.8E-37 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like MC28_0042 c7ef9f71cab9b78ae721cf9d6f8f8f56 194 Gene3D G3DSA:3.40.109.10 7 194 1.5E-52 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_0042 c7ef9f71cab9b78ae721cf9d6f8f8f56 194 Pfam PF00881 Nitroreductase family 19 172 1.0E-28 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_0042 c7ef9f71cab9b78ae721cf9d6f8f8f56 194 SUPERFAMILY SSF55469 16 190 1.57E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_4461 dba7793c6f1b5c649a1e423ebedb5afa 586 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 128 554 99.517 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 MC28_4461 dba7793c6f1b5c649a1e423ebedb5afa 586 Gene3D G3DSA:3.20.20.540 172 485 2.1E-156 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 MC28_4461 dba7793c6f1b5c649a1e423ebedb5afa 586 Pfam PF01964 Radical SAM ThiC family 129 549 3.5E-205 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 MC28_4461 dba7793c6f1b5c649a1e423ebedb5afa 586 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 128 552 6.3E-223 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 MC28_4461 dba7793c6f1b5c649a1e423ebedb5afa 586 Pfam PF13667 ThiC-associated domain 16 88 5.0E-28 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 Gene3D G3DSA:3.10.290.10 1 54 8.4E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 Gene3D G3DSA:3.30.70.1560 126 199 6.1E-54 T 14-10-2018 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 217 3.7E-47 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 96 110 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 SMART SM00363 1 61 3.4E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 Pfam PF01479 S4 domain 2 46 1.5E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 Pfam PF00849 RNA pseudouridylate synthase 61 187 3.2E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 SUPERFAMILY SSF55120 58 222 2.88E-39 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 Gene3D G3DSA:3.30.70.580 62 220 6.1E-54 T 14-10-2018 MC28_1590 52a4d8b2dd1be7fff8f186053d7050f0 235 SUPERFAMILY SSF55174 1 54 1.65E-12 T 14-10-2018 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 21.683 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 PRINTS PR00125 ATP synthase delta subunit signature 74 85 2.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 PRINTS PR00125 ATP synthase delta subunit signature 151 169 2.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 PRINTS PR00125 ATP synthase delta subunit signature 136 151 2.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 PRINTS PR00125 ATP synthase delta subunit signature 85 99 2.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 PRINTS PR00125 ATP synthase delta subunit signature 6 25 2.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 2.4E-53 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 SUPERFAMILY SSF47928 3 105 1.27E-27 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 Gene3D G3DSA:1.10.520.20 3 106 1.9E-16 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4545 84938d98b69a25e8ae30b9706eee04a1 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 7.1E-52 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_2503 5c83d13c42a004097a8b8a8a470cd209 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 13 321 1.4E-39 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_2503 5c83d13c42a004097a8b8a8a470cd209 351 SUPERFAMILY SSF51735 9 331 2.5E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2503 5c83d13c42a004097a8b8a8a470cd209 351 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 6 348 9.5E-150 T 14-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 MC28_2503 5c83d13c42a004097a8b8a8a470cd209 351 Gene3D G3DSA:3.40.50.720 2 189 5.9E-48 T 14-10-2018 MC28_2503 5c83d13c42a004097a8b8a8a470cd209 351 Gene3D G3DSA:3.90.25.10 190 351 5.2E-60 T 14-10-2018 MC28_4676 6bf243ed778321c20e034299bfd3ea34 431 Pfam PF07690 Major Facilitator Superfamily 26 297 2.8E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_4676 6bf243ed778321c20e034299bfd3ea34 431 SUPERFAMILY SSF103473 13 429 2.09E-87 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4676 6bf243ed778321c20e034299bfd3ea34 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_2701 06b7d32e4ce189019bc657359a4a8c05 479 Gene3D G3DSA:1.20.1730.10 25 478 9.9E-80 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily MC28_2701 06b7d32e4ce189019bc657359a4a8c05 479 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 158 183 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site MC28_2701 06b7d32e4ce189019bc657359a4a8c05 479 Pfam PF00474 Sodium:solute symporter family 39 434 1.3E-97 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 MC28_2701 06b7d32e4ce189019bc657359a4a8c05 479 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 3 473 1.4E-239 T 14-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 MC28_2701 06b7d32e4ce189019bc657359a4a8c05 479 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 434 1.8E-89 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 MC28_D006 6b724084b36d1c4ac2eb3f7e796bab14 124 ProDom PD293760 PLASMID MEMBRANE PXO2-27/BXB0026/GBAA_PXO2_0026 TRANSMEMBRANE 1 124 8.0E-49 T 14-10-2018 IPR020331 Uncharacterised protein family, plasmid pXO2-27 MC28_D180 35f946d7d5d8a31f55ea9a205546d70a 545 Gene3D G3DSA:3.40.190.10 54 533 6.3E-178 T 14-10-2018 MC28_D180 35f946d7d5d8a31f55ea9a205546d70a 545 Gene3D G3DSA:3.10.105.10 294 516 6.3E-178 T 14-10-2018 MC28_D180 35f946d7d5d8a31f55ea9a205546d70a 545 SUPERFAMILY SSF53850 38 540 1.99E-124 T 14-10-2018 MC28_D180 35f946d7d5d8a31f55ea9a205546d70a 545 Gene3D G3DSA:3.90.76.10 73 194 6.3E-178 T 14-10-2018 MC28_D180 35f946d7d5d8a31f55ea9a205546d70a 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 464 2.1E-76 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_D180 35f946d7d5d8a31f55ea9a205546d70a 545 PIRSF PIRSF002741 1 545 5.2E-107 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_C024 40660a41d49b24bf5abd3df53b619e64 77 SUPERFAMILY SSF47413 8 68 2.45E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_C024 40660a41d49b24bf5abd3df53b619e64 77 SMART SM00530 9 64 5.4E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_C024 40660a41d49b24bf5abd3df53b619e64 77 Gene3D G3DSA:1.10.260.40 3 70 4.8E-12 T 14-10-2018 MC28_C024 40660a41d49b24bf5abd3df53b619e64 77 Pfam PF01381 Helix-turn-helix 10 64 2.5E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1031 45070c0e1573e594b25bf0c837249156 292 Gene3D G3DSA:3.30.470.10 1 119 1.5E-44 T 14-10-2018 MC28_1031 45070c0e1573e594b25bf0c837249156 292 SUPERFAMILY SSF56752 1 279 1.57E-91 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 MC28_1031 45070c0e1573e594b25bf0c837249156 292 Gene3D G3DSA:3.20.10.10 120 281 1.6E-58 T 14-10-2018 MC28_1031 45070c0e1573e594b25bf0c837249156 292 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 1 280 3.7E-101 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 MC28_1031 45070c0e1573e594b25bf0c837249156 292 Pfam PF01063 Amino-transferase class IV 25 251 4.6E-59 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 MC28_1031 45070c0e1573e594b25bf0c837249156 292 ProSitePatterns PS00770 Aminotransferases class-IV signature. 178 207 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 MC28_3446 b29f0076cd59559efe22363fc290aaf1 137 Pfam PF06491 Disulphide isomerase 1 134 8.6E-61 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family MC28_3446 b29f0076cd59559efe22363fc290aaf1 137 Gene3D G3DSA:3.40.30.10 17 134 6.6E-53 T 14-10-2018 MC28_3446 b29f0076cd59559efe22363fc290aaf1 137 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 1 134 4.3E-62 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 SUPERFAMILY SSF51735 2 251 1.68E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 252 8.3E-40 T 14-10-2018 MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 2.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2468 3fcc96fd3296043867f3b90d5a1e3999 252 Gene3D G3DSA:3.40.50.720 2 252 3.2E-56 T 14-10-2018 MC28_3926 ba23a0353cbef69dea6bd841fb90482a 380 PIRSF PIRSF005572 1 378 5.2E-115 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 MC28_3926 ba23a0353cbef69dea6bd841fb90482a 380 SUPERFAMILY SSF53383 1 372 9.6E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3926 ba23a0353cbef69dea6bd841fb90482a 380 Pfam PF00266 Aminotransferase class-V 2 364 4.8E-74 T 14-10-2018 IPR000192 Aminotransferase class V domain MC28_3926 ba23a0353cbef69dea6bd841fb90482a 380 Gene3D G3DSA:3.40.640.10 13 255 6.6E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3926 ba23a0353cbef69dea6bd841fb90482a 380 Gene3D G3DSA:3.90.1150.10 2 370 6.6E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_0758 4a52efc71da1ed7933fb4fd602aff2ce 255 SUPERFAMILY SSF46626 141 252 9.03E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 MC28_0758 4a52efc71da1ed7933fb4fd602aff2ce 255 Gene3D G3DSA:1.10.760.10 182 253 3.1E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 MC28_0758 4a52efc71da1ed7933fb4fd602aff2ce 255 SUPERFAMILY SSF81648 21 156 7.46E-30 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 MC28_0758 4a52efc71da1ed7933fb4fd602aff2ce 255 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 181 249 1.6E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_0758 4a52efc71da1ed7933fb4fd602aff2ce 255 PIRSF PIRSF036636 1 255 5.2E-154 T 14-10-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 MC28_0758 4a52efc71da1ed7933fb4fd602aff2ce 255 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 81 160 1.8E-9 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 MC28_0758 4a52efc71da1ed7933fb4fd602aff2ce 255 Gene3D G3DSA:1.20.810.10 14 174 2.8E-25 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 MC28_3720 f9a5bf0eceb09e4a40048b97b53cbbc6 277 SUPERFAMILY SSF54675 2 108 1.29E-28 T 14-10-2018 MC28_3720 f9a5bf0eceb09e4a40048b97b53cbbc6 277 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 109 273 4.1E-62 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 MC28_3720 f9a5bf0eceb09e4a40048b97b53cbbc6 277 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 275 4.2E-100 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 MC28_3720 f9a5bf0eceb09e4a40048b97b53cbbc6 277 Gene3D G3DSA:3.20.20.70 123 265 1.3E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_3720 f9a5bf0eceb09e4a40048b97b53cbbc6 277 SUPERFAMILY SSF51690 109 275 7.06E-58 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 MC28_3720 f9a5bf0eceb09e4a40048b97b53cbbc6 277 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 107 1.5E-23 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 MC28_3720 f9a5bf0eceb09e4a40048b97b53cbbc6 277 PIRSF PIRSF006250 1 277 2.7E-95 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 MC28_3720 f9a5bf0eceb09e4a40048b97b53cbbc6 277 Gene3D G3DSA:3.90.1170.20 14 272 1.3E-101 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 MC28_2028 6aa581dc66e5797ff404f77e20599400 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 5.5E-17 T 14-10-2018 MC28_2028 6aa581dc66e5797ff404f77e20599400 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 292 5.5E-17 T 14-10-2018 MC28_2028 6aa581dc66e5797ff404f77e20599400 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.5E-17 T 14-10-2018 MC28_2028 6aa581dc66e5797ff404f77e20599400 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 308 330 5.5E-17 T 14-10-2018 MC28_2028 6aa581dc66e5797ff404f77e20599400 411 SUPERFAMILY SSF51905 1 352 1.84E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2028 6aa581dc66e5797ff404f77e20599400 411 Gene3D G3DSA:3.50.50.60 233 284 6.8E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2028 6aa581dc66e5797ff404f77e20599400 411 Gene3D G3DSA:3.50.50.60 112 169 1.8E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2028 6aa581dc66e5797ff404f77e20599400 411 Pfam PF01134 Glucose inhibited division protein A 312 354 2.4E-4 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 MC28_2028 6aa581dc66e5797ff404f77e20599400 411 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 150 1.4E-10 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_2028 6aa581dc66e5797ff404f77e20599400 411 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 2.0E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_2028 6aa581dc66e5797ff404f77e20599400 411 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 318 336 2.0E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_2028 6aa581dc66e5797ff404f77e20599400 411 Gene3D G3DSA:3.50.50.60 285 342 6.8E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2028 6aa581dc66e5797ff404f77e20599400 411 Gene3D G3DSA:3.50.50.60 3 111 1.8E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4891 5896546ce40ea45e5bccfb4c9b4c27fe 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 457 7.4E-83 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_4891 5896546ce40ea45e5bccfb4c9b4c27fe 536 Gene3D G3DSA:3.10.105.10 290 508 5.4E-157 T 14-10-2018 MC28_4891 5896546ce40ea45e5bccfb4c9b4c27fe 536 Gene3D G3DSA:3.40.190.10 48 520 5.4E-157 T 14-10-2018 MC28_4891 5896546ce40ea45e5bccfb4c9b4c27fe 536 PIRSF PIRSF002741 1 528 1.6E-116 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_4891 5896546ce40ea45e5bccfb4c9b4c27fe 536 SUPERFAMILY SSF53850 32 521 1.01E-128 T 14-10-2018 MC28_4891 5896546ce40ea45e5bccfb4c9b4c27fe 536 Gene3D G3DSA:3.90.76.10 68 190 5.4E-157 T 14-10-2018 MC28_4891 5896546ce40ea45e5bccfb4c9b4c27fe 536 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site MC28_2165 9fc091922f57a24a90116b4a541f4974 520 PIRSF PIRSF000538 1 507 3.2E-126 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 MC28_2165 9fc091922f57a24a90116b4a541f4974 520 Gene3D G3DSA:3.30.420.40 2 244 3.3E-61 T 14-10-2018 MC28_2165 9fc091922f57a24a90116b4a541f4974 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 249 2.6E-51 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 MC28_2165 9fc091922f57a24a90116b4a541f4974 520 SUPERFAMILY SSF53067 4 252 1.19E-56 T 14-10-2018 MC28_2165 9fc091922f57a24a90116b4a541f4974 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 289 456 1.5E-18 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 MC28_2165 9fc091922f57a24a90116b4a541f4974 520 Gene3D G3DSA:3.30.420.40 245 507 4.9E-54 T 14-10-2018 MC28_2165 9fc091922f57a24a90116b4a541f4974 520 SUPERFAMILY SSF53067 251 501 1.2E-49 T 14-10-2018 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 642 5.8E-238 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 SUPERFAMILY SSF55681 247 536 8.09E-95 T 14-10-2018 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Gene3D G3DSA:3.30.54.20 135 191 1.3E-62 T 14-10-2018 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 SUPERFAMILY SSF52954 537 640 1.45E-31 T 14-10-2018 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 174 223 3.1E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 SMART SM00863 174 223 1.2E-25 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Gene3D G3DSA:3.30.980.10 73 226 1.3E-62 T 14-10-2018 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 SUPERFAMILY SSF81271 5 64 5.89E-17 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Gene3D G3DSA:3.30.930.10 229 542 4.7E-116 T 14-10-2018 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 SUPERFAMILY SSF55186 66 245 4.06E-64 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Gene3D G3DSA:3.40.50.800 543 645 3.7E-34 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 645 35.112 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Gene3D G3DSA:3.10.20.30 3 65 6.4E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 474 502 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 335 363 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 544 556 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 517 530 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 368 391 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Pfam PF02824 TGS domain 5 64 5.3E-12 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 328 539 2.9E-34 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3855 94654cf8ecb96ed548157d7e61c09881 645 Pfam PF03129 Anticodon binding domain 551 640 6.5E-25 T 14-10-2018 IPR004154 Anticodon-binding MC28_2205 68d415d5f1a35668a11404f8018b4d84 407 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 258 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_2205 68d415d5f1a35668a11404f8018b4d84 407 Gene3D G3DSA:3.90.1150.10 10 388 2.9E-124 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2205 68d415d5f1a35668a11404f8018b4d84 407 PIRSF PIRSF000521 8 401 4.6E-43 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_2205 68d415d5f1a35668a11404f8018b4d84 407 SUPERFAMILY SSF53383 13 395 3.4E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_2205 68d415d5f1a35668a11404f8018b4d84 407 Gene3D G3DSA:3.40.640.10 57 305 2.9E-124 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2205 68d415d5f1a35668a11404f8018b4d84 407 Pfam PF00202 Aminotransferase class-III 21 395 1.5E-96 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_4923 5f31c543f82151a855e7977815d974f5 300 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 261 1.0E-27 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 MC28_4923 5f31c543f82151a855e7977815d974f5 300 SUPERFAMILY SSF56784 12 294 1.81E-69 T 14-10-2018 IPR036412 HAD-like superfamily MC28_4923 5f31c543f82151a855e7977815d974f5 300 Gene3D G3DSA:3.40.50.1000 12 285 1.1E-80 T 14-10-2018 IPR023214 HAD superfamily MC28_4923 5f31c543f82151a855e7977815d974f5 300 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 288 8.2E-58 T 14-10-2018 IPR000150 Cof family GO:0016787 MC28_4923 5f31c543f82151a855e7977815d974f5 300 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 14-10-2018 MC28_4923 5f31c543f82151a855e7977815d974f5 300 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 288 1.6E-67 T 14-10-2018 MC28_4923 5f31c543f82151a855e7977815d974f5 300 Gene3D G3DSA:3.30.1240.10 90 217 1.1E-80 T 14-10-2018 MC28_4923 5f31c543f82151a855e7977815d974f5 300 ProSitePatterns PS01229 Hypothetical cof family signature 2. 242 264 - T 14-10-2018 MC28_5143 08661a299f1ee2f62a297ffea9bbf8bf 138 Gene3D G3DSA:2.30.110.10 1 138 6.4E-42 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 MC28_5143 08661a299f1ee2f62a297ffea9bbf8bf 138 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 5 128 1.1E-18 T 14-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain MC28_5143 08661a299f1ee2f62a297ffea9bbf8bf 138 SUPERFAMILY SSF50475 3 128 2.24E-29 T 14-10-2018 MC28_3579 f83a848947779eedc11a27bebbad245a 143 Pfam PF14181 YqfQ-like protein 7 143 5.4E-44 T 14-10-2018 IPR025571 YqfQ-like protein MC28_G117 ef25d4f6689846921d90c3bbfca9ef75 256 Gene3D G3DSA:3.40.50.150 57 237 1.9E-33 T 14-10-2018 MC28_G117 ef25d4f6689846921d90c3bbfca9ef75 256 Pfam PF08241 Methyltransferase domain 91 197 4.4E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_G117 ef25d4f6689846921d90c3bbfca9ef75 256 SUPERFAMILY SSF53335 69 221 3.5E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 Gene3D G3DSA:3.40.440.10 5 252 7.4E-109 T 14-10-2018 MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 Gene3D G3DSA:3.90.170.10 265 429 3.2E-72 T 14-10-2018 MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 3.3E-193 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 SMART SM00788 3 422 9.3E-295 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 211.706 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 Pfam PF00709 Adenylosuccinate synthetase 4 420 2.2E-185 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 Gene3D G3DSA:1.10.300.10 100 199 7.4E-109 T 14-10-2018 MC28_4699 b0308fb078d59c39212aaf6b6ef33b2c 429 SUPERFAMILY SSF52540 1 427 5.84E-177 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3001 30f43edee48c73c1da3ac5a38288639a 111 Pfam PF01844 HNH endonuclease 34 95 3.7E-9 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 MC28_3001 30f43edee48c73c1da3ac5a38288639a 111 SMART SM00507 21 91 1.2E-5 T 14-10-2018 IPR003615 HNH nuclease MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 SUPERFAMILY SSF53901 268 389 3.19E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 Pfam PF00108 Thiolase, N-terminal domain 5 259 1.6E-69 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 PIRSF PIRSF000429 1 390 1.7E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 SUPERFAMILY SSF53901 1 262 4.01E-68 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 Gene3D G3DSA:3.40.47.10 127 386 1.3E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 Pfam PF02803 Thiolase, C-terminal domain 268 388 9.7E-50 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 5.3E-135 T 14-10-2018 IPR002155 Thiolase GO:0016747 MC28_4273 18b53fe0644ad684a56f528008ad0b16 390 Gene3D G3DSA:3.40.47.10 6 273 1.3E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 SMART SM00388 296 360 2.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 38 156 2.2E-16 T 14-10-2018 IPR000014 PAS domain MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 158 286 1.2E-9 T 14-10-2018 IPR000014 PAS domain MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 SUPERFAMILY SSF55785 151 279 1.54E-15 T 14-10-2018 IPR035965 PAS domain superfamily MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 Pfam PF00512 His Kinase A (phospho-acceptor) domain 298 356 7.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 508 6.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 SUPERFAMILY SSF55874 354 507 3.67E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 SMART SM00387 402 509 5.0E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 SUPERFAMILY SSF47384 289 357 2.55E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 SUPERFAMILY SSF55785 24 143 8.38E-15 T 14-10-2018 IPR035965 PAS domain superfamily MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 Gene3D G3DSA:1.10.287.130 284 359 2.5E-18 T 14-10-2018 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 Pfam PF08448 PAS fold 169 282 3.2E-10 T 14-10-2018 IPR013656 PAS fold-4 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 Gene3D G3DSA:3.30.450.20 36 145 4.8E-15 T 14-10-2018 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 SMART SM00091 162 227 1.2 T 14-10-2018 IPR000014 PAS domain MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 SMART SM00091 38 104 8.6E-11 T 14-10-2018 IPR000014 PAS domain MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 Gene3D G3DSA:3.30.450.20 149 283 5.1E-17 T 14-10-2018 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 Pfam PF00989 PAS fold 38 117 8.3E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 Gene3D G3DSA:3.30.565.10 361 513 4.5E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 468 3.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 3.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 3.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2787 439eea239f7c396f73d4609f4b9185c4 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 3.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2629 a66a9a20916c3beecce625a9ab2552ec 170 Pfam PF10901 Protein of unknown function (DUF2690) 36 147 6.0E-29 T 14-10-2018 IPR021224 Protein of unknown function DUF2690 MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 SUPERFAMILY SSF158745 676 1031 3.4E-66 T 14-10-2018 MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 SMART SM01260 700 1030 3.3E-53 T 14-10-2018 IPR007822 Lanthionine synthetase C-like MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 Pfam PF13575 Domain of unknown function (DUF4135) 208 578 1.2E-98 T 14-10-2018 IPR025410 Lantibiotic biosynthesis protein, dehydration domain MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 PRINTS PR01950 LanC-like protein superfamily signature 703 721 1.6E-14 T 14-10-2018 IPR007822 Lanthionine synthetase C-like MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 PRINTS PR01950 LanC-like protein superfamily signature 845 861 1.6E-14 T 14-10-2018 IPR007822 Lanthionine synthetase C-like MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 PRINTS PR01950 LanC-like protein superfamily signature 904 924 1.6E-14 T 14-10-2018 IPR007822 Lanthionine synthetase C-like MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 PRINTS PR01950 LanC-like protein superfamily signature 1002 1019 1.6E-14 T 14-10-2018 IPR007822 Lanthionine synthetase C-like MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 PRINTS PR01950 LanC-like protein superfamily signature 950 963 1.6E-14 T 14-10-2018 IPR007822 Lanthionine synthetase C-like MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 Pfam PF05147 Lanthionine synthetase C-like protein 703 1029 4.5E-59 T 14-10-2018 IPR007822 Lanthionine synthetase C-like MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 PIRSF PIRSF037228 54 1032 2.6E-211 T 14-10-2018 IPR017146 Type 2 lantibiotic biosynthesis protein LanM MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 Gene3D G3DSA:1.50.10.10 634 1027 2.7E-41 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 MC28_4039 f91c3e213697290dae7fa1e295c9adb4 1032 TIGRFAM TIGR03897 lanti_2_LanM: type 2 lantibiotic biosynthesis protein LanM 117 1022 5.0E-249 T 14-10-2018 IPR017146 Type 2 lantibiotic biosynthesis protein LanM MC28_2488 17faf20bc50abfc6b6e53ad55608a179 376 Pfam PF01594 AI-2E family transporter 37 367 1.4E-78 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 SUPERFAMILY SSF50156 288 403 9.07E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 SMART SM00228 307 395 1.7E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 Gene3D G3DSA:2.30.42.10 310 412 3.3E-22 T 14-10-2018 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 Gene3D G3DSA:2.40.10.10 189 309 3.7E-41 T 14-10-2018 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 SUPERFAMILY SSF50494 84 304 4.5E-59 T 14-10-2018 IPR009003 Peptidase S1, PA clan MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 Pfam PF13180 PDZ domain 307 400 1.1E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 Gene3D G3DSA:2.40.10.10 68 187 9.3E-26 T 14-10-2018 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 PRINTS PR00834 HtrA/DegQ protease family signature 262 279 4.0E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 PRINTS PR00834 HtrA/DegQ protease family signature 136 148 4.0E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 PRINTS PR00834 HtrA/DegQ protease family signature 352 364 4.0E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 PRINTS PR00834 HtrA/DegQ protease family signature 157 177 4.0E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 PRINTS PR00834 HtrA/DegQ protease family signature 240 257 4.0E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 PRINTS PR00834 HtrA/DegQ protease family signature 198 222 4.0E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MC28_2749 2a0734b6c7e16ffb3ebd9646d947d3a0 413 Pfam PF13365 Trypsin-like peptidase domain 124 269 4.5E-32 T 14-10-2018 MC28_3759 25079885e2a4181f17c64f1bc5933933 117 SMART SM00347 2 94 3.8E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3759 25079885e2a4181f17c64f1bc5933933 117 PRINTS PR00598 Bacterial regulatory protein MarR family signature 37 52 5.4E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3759 25079885e2a4181f17c64f1bc5933933 117 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 5.4E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3759 25079885e2a4181f17c64f1bc5933933 117 PRINTS PR00598 Bacterial regulatory protein MarR family signature 20 36 5.4E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3759 25079885e2a4181f17c64f1bc5933933 117 Pfam PF01047 MarR family 3 61 7.0E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3759 25079885e2a4181f17c64f1bc5933933 117 Gene3D G3DSA:1.10.10.10 1 111 1.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3759 25079885e2a4181f17c64f1bc5933933 117 SUPERFAMILY SSF46785 2 106 4.77E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 Gene3D G3DSA:1.10.3860.10 1 418 7.1E-140 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 401 4.3E-126 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 SUPERFAMILY SSF118215 6 402 9.81E-129 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 9.3E-37 T 14-10-2018 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 9.3E-37 T 14-10-2018 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 9.3E-37 T 14-10-2018 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 9.3E-37 T 14-10-2018 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 9.3E-37 T 14-10-2018 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 9.3E-37 T 14-10-2018 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 9.3E-37 T 14-10-2018 MC28_0669 f89f78da39edcc9e78357b88de2835f6 424 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 296 319 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site MC28_2737 845c56078e3a33003cb18d9ae71226f7 567 Gene3D G3DSA:3.10.105.10 310 537 3.0E-183 T 14-10-2018 MC28_2737 845c56078e3a33003cb18d9ae71226f7 567 Gene3D G3DSA:3.40.190.10 68 552 3.0E-183 T 14-10-2018 MC28_2737 845c56078e3a33003cb18d9ae71226f7 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 97 481 4.5E-79 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_2737 845c56078e3a33003cb18d9ae71226f7 567 PIRSF PIRSF002741 3 567 3.6E-109 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_2737 845c56078e3a33003cb18d9ae71226f7 567 Gene3D G3DSA:3.90.76.10 87 209 3.0E-183 T 14-10-2018 MC28_2737 845c56078e3a33003cb18d9ae71226f7 567 SUPERFAMILY SSF53850 51 561 1.02E-124 T 14-10-2018 MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 SUPERFAMILY SSF55785 13 120 3.14E-14 T 14-10-2018 IPR035965 PAS domain superfamily MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 181 194 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 SMART SM00382 177 321 4.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 Pfam PF13426 PAS domain 32 126 2.2E-10 T 14-10-2018 IPR000014 PAS domain MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 Pfam PF00158 Sigma-54 interaction domain 158 324 7.6E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 SUPERFAMILY SSF52540 157 398 1.41E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 Gene3D G3DSA:1.10.8.60 329 393 2.4E-19 T 14-10-2018 MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 SUPERFAMILY SSF46689 410 456 6.27E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 244 259 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 Gene3D G3DSA:3.30.450.20 9 133 6.5E-17 T 14-10-2018 MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 133 1.1E-9 T 14-10-2018 IPR000014 PAS domain MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 Gene3D G3DSA:1.10.10.60 394 458 4.0E-6 T 14-10-2018 MC28_5040 51956fcc91cd71c25a271777a3c3a6c5 464 Gene3D G3DSA:3.40.50.300 142 328 3.8E-66 T 14-10-2018 MC28_1776 fca5adc23ef617619ec64792603725b2 264 Gene3D G3DSA:3.10.180.10 3 221 1.3E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1776 fca5adc23ef617619ec64792603725b2 264 SUPERFAMILY SSF54593 2 119 6.08E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2420 6b5c26964b81ef3189b54096606c0120 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 233 248 8.6E-5 T 14-10-2018 MC28_2420 6b5c26964b81ef3189b54096606c0120 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 33 55 8.6E-5 T 14-10-2018 MC28_2420 6b5c26964b81ef3189b54096606c0120 428 Gene3D G3DSA:3.30.9.10 126 347 1.3E-77 T 14-10-2018 MC28_2420 6b5c26964b81ef3189b54096606c0120 428 Pfam PF01266 FAD dependent oxidoreductase 33 385 2.6E-61 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MC28_2420 6b5c26964b81ef3189b54096606c0120 428 Gene3D G3DSA:3.50.50.60 33 386 1.3E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2420 6b5c26964b81ef3189b54096606c0120 428 SUPERFAMILY SSF51905 32 406 5.96E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 SUPERFAMILY SSF52025 458 530 4.97E-19 T 14-10-2018 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 Gene3D G3DSA:2.60.40.4130 1225 1392 2.4E-13 T 14-10-2018 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 618 628 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 SUPERFAMILY SSF49384 1078 1185 2.76E-6 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 PRINTS PR00723 Subtilisin serine protease family (S8) signature 296 309 4.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 PRINTS PR00723 Subtilisin serine protease family (S8) signature 617 633 4.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 PRINTS PR00723 Subtilisin serine protease family (S8) signature 219 238 4.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 300 310 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 Pfam PF05922 Peptidase inhibitor I9 84 185 2.0E-9 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 SUPERFAMILY SSF63446 1326 1381 3.27E-7 T 14-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 Gene3D G3DSA:3.40.50.200 192 437 3.2E-54 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 Gene3D G3DSA:3.40.50.200 550 680 5.9E-35 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 Pfam PF02225 PA domain 460 540 7.8E-17 T 14-10-2018 IPR003137 PA domain MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 Gene3D G3DSA:3.50.30.30 438 549 6.9E-33 T 14-10-2018 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 SUPERFAMILY SSF52743 204 678 7.2E-86 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 PIRSF PIRSF037844 1 1413 0.0 T 14-10-2018 IPR017292 Peptidase S8A, Vpr MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 Pfam PF00082 Subtilase family 219 668 8.0E-67 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_5363 2f4e6fae9856362ee15e762b3a23f803 1413 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 224 235 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site MC28_3796 5ff55492d2a7ae7643a61bdaded4a901 208 SUPERFAMILY SSF81343 4 203 7.85E-63 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3796 5ff55492d2a7ae7643a61bdaded4a901 208 PIRSF PIRSF000170 1 204 6.8E-105 T 14-10-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute MC28_3796 5ff55492d2a7ae7643a61bdaded4a901 208 Gene3D G3DSA:1.20.1300.10 1 208 9.0E-48 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_3796 5ff55492d2a7ae7643a61bdaded4a901 208 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 5 200 1.7E-55 T 14-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit MC28_3796 5ff55492d2a7ae7643a61bdaded4a901 208 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 91 190 1.3E-12 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 MC28_2102 513d43d58fcf7b285311449148ff21a0 348 Pfam PF01594 AI-2E family transporter 5 335 6.4E-85 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 SMART SM00304 307 359 1.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 534 6.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 548 6.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 573 6.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 577 4.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 SMART SM00387 483 594 4.2E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 SUPERFAMILY SSF55874 429 590 3.54E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 Pfam PF00672 HAMP domain 309 355 1.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 Gene3D G3DSA:3.30.565.10 443 593 1.8E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 SUPERFAMILY SSF158472 309 358 1.29E-8 T 14-10-2018 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 Gene3D G3DSA:1.10.287.130 366 442 2.4E-18 T 14-10-2018 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 SMART SM00388 374 439 8.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 Pfam PF00512 His Kinase A (phospho-acceptor) domain 375 439 1.9E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 SUPERFAMILY SSF47384 359 439 5.1E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_G161 e21e5ba0e47a87bc3179b5895dc0abca 594 Gene3D G3DSA:1.20.1480.50 268 365 5.7E-14 T 14-10-2018 MC28_4570 574bef1f73ff45577ff388ca3cbee8a0 429 SUPERFAMILY SSF55205 1 416 1.14E-133 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 MC28_4570 574bef1f73ff45577ff388ca3cbee8a0 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 9.8E-92 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 MC28_4570 574bef1f73ff45577ff388ca3cbee8a0 429 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 4.8E-170 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4570 574bef1f73ff45577ff388ca3cbee8a0 429 Gene3D G3DSA:3.65.10.10 6 413 1.3E-160 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 MC28_4570 574bef1f73ff45577ff388ca3cbee8a0 429 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 42.281 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4570 574bef1f73ff45577ff388ca3cbee8a0 429 Gene3D G3DSA:3.65.10.10 21 229 1.3E-160 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 MC28_4587 6b63218e8558022ce7aafb90027d52b3 582 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 246 404 3.6E-31 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 MC28_4587 6b63218e8558022ce7aafb90027d52b3 582 SUPERFAMILY SSF55486 246 569 9.02E-54 T 14-10-2018 MC28_4587 6b63218e8558022ce7aafb90027d52b3 582 Gene3D G3DSA:3.10.170.10 245 408 1.0E-31 T 14-10-2018 MC28_4587 6b63218e8558022ce7aafb90027d52b3 582 Gene3D G3DSA:1.10.390.10 415 569 4.5E-29 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily MC28_4587 6b63218e8558022ce7aafb90027d52b3 582 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 85 132 7.7E-12 T 14-10-2018 IPR011096 FTP domain MC28_4587 6b63218e8558022ce7aafb90027d52b3 582 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 418 569 5.5E-25 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 MC28_2631 66c95a933839537e1f8b68aca52f2a34 326 Gene3D G3DSA:3.90.180.10 14 323 3.7E-94 T 14-10-2018 MC28_2631 66c95a933839537e1f8b68aca52f2a34 326 Gene3D G3DSA:3.40.50.720 128 270 3.7E-94 T 14-10-2018 MC28_2631 66c95a933839537e1f8b68aca52f2a34 326 Pfam PF00107 Zinc-binding dehydrogenase 156 265 2.4E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MC28_2631 66c95a933839537e1f8b68aca52f2a34 326 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 145 166 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 MC28_2631 66c95a933839537e1f8b68aca52f2a34 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 92 1.2E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_2631 66c95a933839537e1f8b68aca52f2a34 326 SMART SM00829 15 324 2.0E-21 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_2631 66c95a933839537e1f8b68aca52f2a34 326 SUPERFAMILY SSF51735 117 278 2.23E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2631 66c95a933839537e1f8b68aca52f2a34 326 SUPERFAMILY SSF50129 4 149 2.59E-36 T 14-10-2018 IPR011032 GroES-like superfamily MC28_2211 5b40a782d91a765a3fb483a912395641 168 Pfam PF13042 Protein of unknown function (DUF3902) 2 162 2.5E-101 T 14-10-2018 IPR025001 Protein of unknown function DUF3902 MC28_2563 7818d2f2ffbebaa19a6e579abfe63e47 249 Gene3D G3DSA:3.40.1390.30 27 232 2.6E-37 T 14-10-2018 MC28_2563 7818d2f2ffbebaa19a6e579abfe63e47 249 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 233 1.7E-42 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 MC28_2563 7818d2f2ffbebaa19a6e579abfe63e47 249 Gene3D G3DSA:3.40.1390.30 93 219 2.6E-37 T 14-10-2018 MC28_2563 7818d2f2ffbebaa19a6e579abfe63e47 249 SUPERFAMILY SSF102705 1 239 4.45E-48 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily MC28_3890 0e3be468a5b23337ff973cdcd8e9ffcf 227 Pfam PF13483 Beta-lactamase superfamily domain 2 193 1.6E-28 T 14-10-2018 MC28_3890 0e3be468a5b23337ff973cdcd8e9ffcf 227 SUPERFAMILY SSF56281 1 220 9.57E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3890 0e3be468a5b23337ff973cdcd8e9ffcf 227 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 227 38.55 T 14-10-2018 IPR022877 Protein of unknown funcion UPF0173 MC28_3890 0e3be468a5b23337ff973cdcd8e9ffcf 227 Gene3D G3DSA:3.60.15.10 1 227 4.7E-77 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3890 0e3be468a5b23337ff973cdcd8e9ffcf 227 SMART SM00849 7 193 1.3E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_C030 fb145cd25282b11d737bede9890db51f 934 Gene3D G3DSA:3.40.50.300 603 775 7.5E-8 T 14-10-2018 MC28_C030 fb145cd25282b11d737bede9890db51f 934 Gene3D G3DSA:3.40.50.300 328 538 3.8E-6 T 14-10-2018 MC28_C030 fb145cd25282b11d737bede9890db51f 934 SUPERFAMILY SSF52540 370 725 8.7E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F122 f7ae60faf57689a154f64fa0170a1dee 303 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 217 5.5E-90 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 MC28_F122 f7ae60faf57689a154f64fa0170a1dee 303 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 6 303 9.2E-118 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 MC28_F266 602fe53cc28af778e51874e3d521f743 637 TIGRFAM TIGR01863 cas_Csd1: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG 4 623 1.8E-136 T 14-10-2018 IPR010144 CRISPR-associated protein, Csd1-type MC28_F266 602fe53cc28af778e51874e3d521f743 637 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 7 618 7.9E-131 T 14-10-2018 IPR010144 CRISPR-associated protein, Csd1-type MC28_0217 f70384f84db7df98553f4960cf210f20 336 Gene3D G3DSA:3.30.1180.20 191 336 1.1E-43 T 14-10-2018 MC28_0217 f70384f84db7df98553f4960cf210f20 336 SUPERFAMILY SSF82549 5 336 1.7E-103 T 14-10-2018 MC28_0217 f70384f84db7df98553f4960cf210f20 336 TIGRFAM TIGR02362 dhaK1b: probable dihydroxyacetone kinase DhaK1b subunit 7 336 1.9E-134 T 14-10-2018 IPR012735 Dihydroxyacetone kinase DhaK, subunit 1b MC28_0217 f70384f84db7df98553f4960cf210f20 336 Pfam PF02733 Dak1 domain 22 333 3.2E-96 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_0217 f70384f84db7df98553f4960cf210f20 336 Gene3D G3DSA:3.40.50.10440 16 190 1.7E-55 T 14-10-2018 MC28_1887 213b35dd2739eee43938f22998c290f8 320 Gene3D G3DSA:3.60.15.10 43 315 1.8E-78 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1887 213b35dd2739eee43938f22998c290f8 320 PIRSF PIRSF038896 2 309 1.1E-90 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 MC28_1887 213b35dd2739eee43938f22998c290f8 320 SUPERFAMILY SSF56281 55 306 1.07E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1887 213b35dd2739eee43938f22998c290f8 320 Pfam PF12706 Beta-lactamase superfamily domain 72 267 7.2E-41 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2792 7f174f749717bd0bdfb760443c42e11c 158 Gene3D G3DSA:2.30.30.840 2 67 4.1E-26 T 14-10-2018 MC28_2792 7f174f749717bd0bdfb760443c42e11c 158 Pfam PF02559 CarD-like/TRCF domain 7 115 7.6E-17 T 14-10-2018 IPR003711 CarD-like/TRCF domain MC28_2792 7f174f749717bd0bdfb760443c42e11c 158 SUPERFAMILY SSF141259 7 63 2.88E-12 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily MC28_2792 7f174f749717bd0bdfb760443c42e11c 158 Gene3D G3DSA:1.20.58.1290 68 158 2.9E-27 T 14-10-2018 MC28_2792 7f174f749717bd0bdfb760443c42e11c 158 SMART SM01058 6 116 3.2E-29 T 14-10-2018 IPR003711 CarD-like/TRCF domain MC28_0748 e5d7df5330093d77bbec4fced1240dd1 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site MC28_0748 e5d7df5330093d77bbec4fced1240dd1 320 Pfam PF00348 Polyprenyl synthetase 31 269 1.2E-63 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 MC28_0748 e5d7df5330093d77bbec4fced1240dd1 320 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 320 2.1E-172 T 14-10-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 MC28_0748 e5d7df5330093d77bbec4fced1240dd1 320 Gene3D G3DSA:1.10.600.10 7 320 5.4E-97 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily MC28_0748 e5d7df5330093d77bbec4fced1240dd1 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site MC28_0748 e5d7df5330093d77bbec4fced1240dd1 320 SUPERFAMILY SSF48576 7 319 6.72E-84 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily MC28_1592 ade3ac24c9dadfa21e9b29fe07ebfd5f 258 SUPERFAMILY SSF52540 9 235 9.76E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1592 ade3ac24c9dadfa21e9b29fe07ebfd5f 258 Gene3D G3DSA:3.40.50.300 6 255 6.2E-67 T 14-10-2018 MC28_1592 ade3ac24c9dadfa21e9b29fe07ebfd5f 258 Pfam PF00005 ABC transporter 29 177 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1592 ade3ac24c9dadfa21e9b29fe07ebfd5f 258 SMART SM00382 38 226 8.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2591 071944994be758111d3b915864bd10fd 85 Pfam PF12650 Domain of unknown function (DUF3784) 2 82 6.1E-12 T 14-10-2018 IPR017259 Uncharacterised conserved protein UCP037672 MC28_1607 cb6a92115cd44e590e3bceec55814ff2 409 SUPERFAMILY SSF46689 357 406 1.88E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1607 cb6a92115cd44e590e3bceec55814ff2 409 SUPERFAMILY SSF46689 306 354 5.11E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1607 cb6a92115cd44e590e3bceec55814ff2 409 Pfam PF12833 Helix-turn-helix domain 326 404 3.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_1607 cb6a92115cd44e590e3bceec55814ff2 409 Gene3D G3DSA:1.10.10.60 354 407 2.6E-18 T 14-10-2018 MC28_1607 cb6a92115cd44e590e3bceec55814ff2 409 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 357 399 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MC28_1607 cb6a92115cd44e590e3bceec55814ff2 409 Gene3D G3DSA:1.10.10.60 301 353 1.3E-15 T 14-10-2018 MC28_1607 cb6a92115cd44e590e3bceec55814ff2 409 SMART SM00342 320 403 8.9E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_F101 714288faa8a4f94c1c18c2662d7ca2b1 471 SUPERFAMILY SSF51695 47 358 7.85E-52 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_F101 714288faa8a4f94c1c18c2662d7ca2b1 471 SMART SM00148 55 206 1.3E-7 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_F101 714288faa8a4f94c1c18c2662d7ca2b1 471 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 86 204 2.8E-9 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_0083 5757501b2f56c9e970831998dd918a07 147 Gene3D G3DSA:3.10.180.10 28 147 1.3E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0083 5757501b2f56c9e970831998dd918a07 147 SUPERFAMILY SSF54593 29 142 1.1E-10 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0607 826378bae231eb8d72aecbe6aeb1db63 376 PIRSF PIRSF500216 1 376 1.8E-155 T 14-10-2018 IPR024024 D-alanyl transfer protein DltB MC28_0607 826378bae231eb8d72aecbe6aeb1db63 376 PIRSF PIRSF016636 2 373 1.2E-79 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB MC28_0607 826378bae231eb8d72aecbe6aeb1db63 376 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 2 372 3.2E-152 T 14-10-2018 IPR024024 D-alanyl transfer protein DltB MC28_0607 826378bae231eb8d72aecbe6aeb1db63 376 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 70 333 7.2E-15 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT MC28_G265 28b041182896c8b4b0c80bf1fb8fc4ac 212 Pfam PF13702 Lysozyme-like 118 207 2.2E-31 T 14-10-2018 MC28_G265 28b041182896c8b4b0c80bf1fb8fc4ac 212 Gene3D G3DSA:1.10.530.10 115 211 9.8E-31 T 14-10-2018 MC28_G265 28b041182896c8b4b0c80bf1fb8fc4ac 212 SUPERFAMILY SSF53955 123 208 1.01E-11 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_B12 2ee06e444c0a5233d81f525ccd0f6dd8 980 Gene3D G3DSA:1.10.287.700 644 745 8.7E-7 T 14-10-2018 MC28_B12 2ee06e444c0a5233d81f525ccd0f6dd8 980 Pfam PF10145 Phage-related minor tail protein 117 311 6.8E-24 T 14-10-2018 IPR010090 Phage tail tape measure protein MC28_B12 2ee06e444c0a5233d81f525ccd0f6dd8 980 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 70 413 4.6E-10 T 14-10-2018 IPR010090 Phage tail tape measure protein MC28_B12 2ee06e444c0a5233d81f525ccd0f6dd8 980 SUPERFAMILY SSF48371 478 791 2.21E-6 T 14-10-2018 IPR016024 Armadillo-type fold MC28_1288 28264171a6c88cf0b4a57993261a4c11 258 ProSitePatterns PS01229 Hypothetical cof family signature 2. 206 228 - T 14-10-2018 MC28_1288 28264171a6c88cf0b4a57993261a4c11 258 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 252 5.7E-57 T 14-10-2018 MC28_1288 28264171a6c88cf0b4a57993261a4c11 258 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 225 1.9E-26 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 MC28_1288 28264171a6c88cf0b4a57993261a4c11 258 Gene3D G3DSA:3.30.1240.10 80 181 3.8E-62 T 14-10-2018 MC28_1288 28264171a6c88cf0b4a57993261a4c11 258 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 251 1.5E-50 T 14-10-2018 IPR000150 Cof family GO:0016787 MC28_1288 28264171a6c88cf0b4a57993261a4c11 258 SUPERFAMILY SSF56784 1 255 1.24E-57 T 14-10-2018 IPR036412 HAD-like superfamily MC28_1288 28264171a6c88cf0b4a57993261a4c11 258 Gene3D G3DSA:3.40.50.1000 3 248 3.8E-62 T 14-10-2018 IPR023214 HAD superfamily MC28_1288 28264171a6c88cf0b4a57993261a4c11 258 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 Gene3D G3DSA:2.40.30.10 692 901 5.8E-69 T 14-10-2018 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 Gene3D G3DSA:1.10.630.10 12 482 9.8E-170 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 Gene3D G3DSA:3.40.50.360 502 652 4.7E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 Gene3D G3DSA:3.40.50.80 912 1072 3.9E-56 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 SUPERFAMILY SSF48264 13 464 1.14E-109 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 Pfam PF00258 Flavodoxin 506 638 4.7E-27 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 SUPERFAMILY SSF52343 911 1070 7.46E-46 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PIRSF PIRSF000209 10 1073 0.0 T 14-10-2018 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 KEGG: 00071+1.14.14.1|KEGG: 00140+1.14.14.1|KEGG: 00232+1.14.14.1|KEGG: 00380+1.14.14.1|KEGG: 00590+1.14.14.1|KEGG: 00591+1.14.14.1|KEGG: 00627+1.14.14.1|KEGG: 00830+1.14.14.1|KEGG: 00980+1.14.14.1|KEGG: 00982+1.14.14.1|MetaCyc: PWY-5451|MetaCyc: PWY-5665|MetaCyc: PWY-6398|MetaCyc: PWY-6992|MetaCyc: PWY-7466|MetaCyc: PWY-7826 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 Pfam PF00067 Cytochrome P450 25 457 6.9E-87 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 SUPERFAMILY SSF63380 684 907 8.51E-63 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 Gene3D G3DSA:1.20.990.10 727 849 5.8E-69 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 SUPERFAMILY SSF52218 500 656 4.19E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 717 727 1.0E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 923 942 1.0E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 952 961 1.0E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 996 1012 1.0E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1019 1027 1.0E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 886 895 1.0E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 851 858 1.0E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 965 976 1.0E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 Pfam PF00175 Oxidoreductase NAD-binding domain 924 1034 8.4E-15 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 406 415 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 Pfam PF00667 FAD binding domain 685 891 1.6E-40 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00369 Flavodoxin signature 583 593 5.2E-9 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00369 Flavodoxin signature 608 627 5.2E-9 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 MC28_2359 1aeae66f23d8451022bb47de9d39d06f 1073 PRINTS PR00369 Flavodoxin signature 505 518 5.2E-9 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 MC28_G228 a8dae4b67108575cd104f4db9b59c1e0 66 Pfam PF13076 Fur-regulated basic protein A 26 62 4.1E-10 T 14-10-2018 IPR025072 Fur-regulated basic protein A MC28_4479 0f4c963a7662bffb3ae6d03730b5ee26 161 Pfam PF04892 VanZ like family 7 154 2.8E-23 T 14-10-2018 IPR006976 VanZ-like MC28_4479 0f4c963a7662bffb3ae6d03730b5ee26 161 PIRSF PIRSF019083 1 161 6.3E-55 T 14-10-2018 IPR016747 Phosphotransbutyrylase MC28_0032 80bb023af3280708a1197057248d1341 253 SUPERFAMILY SSF141523 23 142 5.36E-34 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like MC28_0032 80bb023af3280708a1197057248d1341 253 Pfam PF03734 L,D-transpeptidase catalytic domain 24 142 2.6E-24 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 MC28_0032 80bb023af3280708a1197057248d1341 253 Gene3D G3DSA:2.40.440.10 13 173 3.1E-42 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like MC28_0838 ffa6b6df04bd262f79a7a111b61a8508 286 SUPERFAMILY SSF55729 5 265 3.71E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_0838 ffa6b6df04bd262f79a7a111b61a8508 286 Gene3D G3DSA:3.40.630.90 141 286 6.1E-11 T 14-10-2018 MC28_0838 ffa6b6df04bd262f79a7a111b61a8508 286 Gene3D G3DSA:3.40.630.30 2 126 9.5E-17 T 14-10-2018 MC28_0838 ffa6b6df04bd262f79a7a111b61a8508 286 Pfam PF13673 Acetyltransferase (GNAT) domain 32 122 4.8E-9 T 14-10-2018 IPR000182 GNAT domain MC28_5242 bb62fc834802983d7b09a068c1823539 270 Hamap MF_01114 Regulatory protein RecX [recX]. 46 213 16.02 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 MC28_5242 bb62fc834802983d7b09a068c1823539 270 Gene3D G3DSA:1.10.10.10 112 156 2.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5242 bb62fc834802983d7b09a068c1823539 270 Pfam PF02631 RecX family 88 210 6.9E-27 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 MC28_5242 bb62fc834802983d7b09a068c1823539 270 Gene3D G3DSA:1.10.10.2800 1 111 2.4E-32 T 14-10-2018 MC28_5242 bb62fc834802983d7b09a068c1823539 270 Gene3D G3DSA:1.10.10.10 220 270 1.3E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5242 bb62fc834802983d7b09a068c1823539 270 Gene3D G3DSA:1.10.10.10 157 219 2.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3784 57466196d7c037b71f8f4f099a5af7a7 321 Pfam PF13536 Putative multidrug resistance efflux transporter 38 304 2.2E-89 T 14-10-2018 IPR032713 Putative multidrug resistance efflux transporter MC28_4020 e6d35ad4543b7c9271fb2af49a0801b4 408 Gene3D G3DSA:1.20.1250.20 216 400 2.4E-22 T 14-10-2018 MC28_4020 e6d35ad4543b7c9271fb2af49a0801b4 408 Pfam PF07690 Major Facilitator Superfamily 21 350 3.0E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_4020 e6d35ad4543b7c9271fb2af49a0801b4 408 Gene3D G3DSA:1.20.1250.20 8 215 3.3E-29 T 14-10-2018 MC28_4020 e6d35ad4543b7c9271fb2af49a0801b4 408 SUPERFAMILY SSF103473 13 398 9.02E-62 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 545 561 2.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 531 545 2.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 561 573 2.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 SUPERFAMILY SSF52172 378 509 1.57E-32 T 14-10-2018 IPR011006 CheY-like superfamily MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 SUPERFAMILY SSF46894 528 591 1.53E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 SMART SM00387 282 372 4.0E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 Gene3D G3DSA:3.40.50.12740 379 591 3.1E-62 T 14-10-2018 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 SMART SM00421 528 585 1.9E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 370 1.1E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 SUPERFAMILY SSF55874 254 369 1.44E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 Pfam PF07730 Histidine kinase 180 241 6.8E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 Pfam PF00072 Response regulator receiver domain 382 492 1.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 Gene3D G3DSA:3.30.565.10 244 377 6.4E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 Pfam PF00196 Bacterial regulatory proteins, luxR family 531 585 2.7E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 SMART SM00448 379 492 8.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G108 c2cfe86e632981cc64c028a5f830ef5d 592 ProSitePatterns PS00622 LuxR-type HTH domain signature. 545 572 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4548 69e5552af87e2501537884c4c1217b88 239 Pfam PF00119 ATP synthase A chain 20 231 2.1E-57 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4548 69e5552af87e2501537884c4c1217b88 239 Gene3D G3DSA:1.20.120.220 70 239 4.0E-41 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4548 69e5552af87e2501537884c4c1217b88 239 ProSitePatterns PS00449 ATP synthase a subunit signature. 168 177 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4548 69e5552af87e2501537884c4c1217b88 239 SUPERFAMILY SSF81336 69 231 3.01E-41 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4548 69e5552af87e2501537884c4c1217b88 239 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 14 234 5.3E-48 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4548 69e5552af87e2501537884c4c1217b88 239 Hamap MF_01393 ATP synthase subunit a [atpB]. 7 238 13.755 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4548 69e5552af87e2501537884c4c1217b88 239 PRINTS PR00123 ATP synthase A subunit signature 149 164 4.4E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4548 69e5552af87e2501537884c4c1217b88 239 PRINTS PR00123 ATP synthase A subunit signature 165 187 4.4E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4548 69e5552af87e2501537884c4c1217b88 239 PRINTS PR00123 ATP synthase A subunit signature 218 233 4.4E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4548 69e5552af87e2501537884c4c1217b88 239 PRINTS PR00123 ATP synthase A subunit signature 77 93 4.4E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_0561 bcbb0de3c6d531afc93f9d9381558ff3 209 Gene3D G3DSA:3.40.225.10 8 209 4.3E-23 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily MC28_0561 bcbb0de3c6d531afc93f9d9381558ff3 209 SMART SM01007 9 196 2.6E-15 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal MC28_0561 bcbb0de3c6d531afc93f9d9381558ff3 209 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 69.645 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 MC28_0561 bcbb0de3c6d531afc93f9d9381558ff3 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 193 1.5E-20 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal MC28_0561 bcbb0de3c6d531afc93f9d9381558ff3 209 SUPERFAMILY SSF53639 7 204 1.65E-28 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily MC28_5432 fb60fa05be697505a42165db31f52a33 60 Pfam PF11755 Protein of unknown function (DUF3311) 1 55 8.0E-16 T 14-10-2018 IPR021741 Protein of unknown function DUF3311 MC28_2570 d9fab172b4674cfbce116a7868bd7ffd 178 Pfam PF02525 Flavodoxin-like fold 2 168 1.1E-42 T 14-10-2018 IPR003680 Flavodoxin-like fold MC28_2570 d9fab172b4674cfbce116a7868bd7ffd 178 SUPERFAMILY SSF52218 1 172 2.19E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_2570 d9fab172b4674cfbce116a7868bd7ffd 178 Gene3D G3DSA:3.40.50.360 1 177 7.1E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 PIRSF PIRSF000106 2 560 7.0E-229 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 Pfam PF03949 Malic enzyme, NAD binding domain 269 526 4.8E-107 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 Gene3D G3DSA:3.40.50.720 267 564 4.1E-111 T 14-10-2018 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 Gene3D G3DSA:3.40.50.10380 11 266 2.9E-108 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 SUPERFAMILY SSF53223 4 268 7.19E-107 T 14-10-2018 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 ProSitePatterns PS00331 Malic enzymes signature. 265 281 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 Pfam PF00390 Malic enzyme, N-terminal domain 77 259 2.4E-73 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 SMART SM00919 269 527 2.6E-129 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 SMART SM01274 77 259 4.3E-99 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 SUPERFAMILY SSF51735 269 559 4.85E-97 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 PRINTS PR00072 Malic enzyme signature 83 107 3.6E-71 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 PRINTS PR00072 Malic enzyme signature 265 281 3.6E-71 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 PRINTS PR00072 Malic enzyme signature 181 203 3.6E-71 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 PRINTS PR00072 Malic enzyme signature 405 421 3.6E-71 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 PRINTS PR00072 Malic enzyme signature 240 258 3.6E-71 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 PRINTS PR00072 Malic enzyme signature 296 312 3.6E-71 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_0991 f0c4f8267422c618cc8511828f979aeb 565 PRINTS PR00072 Malic enzyme signature 145 174 3.6E-71 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 MC28_2681 8976842c456dc2bbdf86a382fec95b6d 314 Gene3D G3DSA:3.10.180.10 197 313 1.7E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2681 8976842c456dc2bbdf86a382fec95b6d 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 21 158 7.3E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_2681 8976842c456dc2bbdf86a382fec95b6d 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 199 309 1.3E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_2681 8976842c456dc2bbdf86a382fec95b6d 314 SUPERFAMILY SSF54593 13 171 1.95E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2681 8976842c456dc2bbdf86a382fec95b6d 314 Gene3D G3DSA:3.10.180.10 20 180 1.2E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2681 8976842c456dc2bbdf86a382fec95b6d 314 SUPERFAMILY SSF54593 197 309 1.37E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3348 0d05b4d59fb550992225382e926929cb 254 SMART SM00849 10 203 3.1E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3348 0d05b4d59fb550992225382e926929cb 254 Pfam PF00753 Metallo-beta-lactamase superfamily 8 201 4.8E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3348 0d05b4d59fb550992225382e926929cb 254 SUPERFAMILY SSF56281 1 242 3.54E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3348 0d05b4d59fb550992225382e926929cb 254 Gene3D G3DSA:3.60.15.10 1 244 6.7E-68 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_4632 173d76a89d92d8014d47733fb9551a8c 330 Pfam PF12679 ABC-2 family transporter protein 6 328 8.1E-25 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 MC28_4525 8aac4f2b5e4558b7161465e6fb37c61c 218 SUPERFAMILY SSF143842 14 215 2.35E-50 T 14-10-2018 IPR036209 YwmB-like superfamily MC28_4525 8aac4f2b5e4558b7161465e6fb37c61c 218 Gene3D G3DSA:3.30.2030.10 14 144 1.1E-18 T 14-10-2018 MC28_4525 8aac4f2b5e4558b7161465e6fb37c61c 218 Gene3D G3DSA:3.30.360.40 145 218 1.3E-27 T 14-10-2018 MC28_4525 8aac4f2b5e4558b7161465e6fb37c61c 218 Pfam PF08680 TATA-box binding 30 218 1.4E-45 T 14-10-2018 IPR014794 TATA-box binding MC28_4850 7807bf09e7b6d20c8768ebdf331c7865 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 28.431 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4850 7807bf09e7b6d20c8768ebdf331c7865 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 120 2.7E-48 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4850 7807bf09e7b6d20c8768ebdf331c7865 120 Pfam PF01196 Ribosomal protein L17 16 120 1.9E-39 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4850 7807bf09e7b6d20c8768ebdf331c7865 120 Gene3D G3DSA:3.90.1030.10 1 120 6.6E-50 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4850 7807bf09e7b6d20c8768ebdf331c7865 120 SUPERFAMILY SSF64263 2 120 1.57E-44 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4850 7807bf09e7b6d20c8768ebdf331c7865 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3837 33ac9c5c7396f5901b1e703d55dcf845 296 Gene3D G3DSA:3.30.420.10 79 296 2.2E-81 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_3837 33ac9c5c7396f5901b1e703d55dcf845 296 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 1 286 4.1E-88 T 14-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 MC28_3837 33ac9c5c7396f5901b1e703d55dcf845 296 Gene3D G3DSA:3.30.310.10 1 71 3.4E-24 T 14-10-2018 IPR012295 TBP domain superfamily MC28_3837 33ac9c5c7396f5901b1e703d55dcf845 296 SUPERFAMILY SSF53098 80 294 3.95E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_3837 33ac9c5c7396f5901b1e703d55dcf845 296 PIRSF PIRSF037748 1 295 1.4E-117 T 14-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 MC28_3837 33ac9c5c7396f5901b1e703d55dcf845 296 Pfam PF01351 Ribonuclease HII 82 287 3.3E-48 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain MC28_3837 33ac9c5c7396f5901b1e703d55dcf845 296 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 294 33.466 T 14-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 MC28_3837 33ac9c5c7396f5901b1e703d55dcf845 296 Pfam PF11858 Domain of unknown function (DUF3378) 1 62 2.0E-22 T 14-10-2018 IPR024568 Ribonuclease HIII, N-terminal MC28_1816 c9839d5bd61a8bdb0f8c23a2aa142478 160 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 7 151 1.6E-21 T 14-10-2018 IPR006524 Transcription activator, ArpU family MC28_2382 72d0b2f139a6090e072f8aead635df48 448 SMART SM00388 228 294 1.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 Gene3D G3DSA:3.30.565.10 292 448 9.7E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2382 72d0b2f139a6090e072f8aead635df48 448 Gene3D G3DSA:1.10.8.500 174 223 8.8E-13 T 14-10-2018 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 SUPERFAMILY SSF55874 284 448 8.77E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2382 72d0b2f139a6090e072f8aead635df48 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 447 3.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2382 72d0b2f139a6090e072f8aead635df48 448 SMART SM00387 338 448 4.8E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2382 72d0b2f139a6090e072f8aead635df48 448 Pfam PF00672 HAMP domain 176 223 8.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 Gene3D G3DSA:1.10.287.130 224 291 1.2E-20 T 14-10-2018 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 SMART SM00304 175 227 4.1E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 SUPERFAMILY SSF47384 211 293 1.08E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 2.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 2.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 2.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 447 2.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 293 2.2E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_2382 72d0b2f139a6090e072f8aead635df48 448 SUPERFAMILY SSF158472 176 225 1.57E-11 T 14-10-2018 MC28_0668 b1d726d1d59c42f2a1c8ada34a6ad1cf 422 Gene3D G3DSA:2.70.70.10 245 421 1.1E-40 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0668 b1d726d1d59c42f2a1c8ada34a6ad1cf 422 SUPERFAMILY SSF51261 227 420 4.87E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0668 b1d726d1d59c42f2a1c8ada34a6ad1cf 422 Gene3D G3DSA:1.20.5.1160 33 115 2.6E-6 T 14-10-2018 MC28_0668 b1d726d1d59c42f2a1c8ada34a6ad1cf 422 Pfam PF01551 Peptidase family M23 313 410 9.9E-30 T 14-10-2018 IPR016047 Peptidase M23 MC28_F210 6e6eed85e484ec41c1f646570515aab3 454 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 247 277 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 MC28_F210 6e6eed85e484ec41c1f646570515aab3 454 Gene3D G3DSA:3.40.50.1820 161 438 2.0E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_F210 6e6eed85e484ec41c1f646570515aab3 454 Gene3D G3DSA:3.10.450.590 37 140 1.0E-6 T 14-10-2018 MC28_F210 6e6eed85e484ec41c1f646570515aab3 454 Pfam PF13026 Protein of unknown function (DUF3887) 51 137 6.4E-8 T 14-10-2018 IPR024981 Domain of unknown function DUF3887 KEGG: 00983+3.1.1.1|MetaCyc: PWY-6303|MetaCyc: PWY-6857 MC28_F210 6e6eed85e484ec41c1f646570515aab3 454 Pfam PF12146 Serine aminopeptidase, S33 209 418 2.7E-11 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 MC28_F210 6e6eed85e484ec41c1f646570515aab3 454 SUPERFAMILY SSF53474 166 425 1.47E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_D061 47e0d54d43f049183d8c67d93610b5cd 205 Gene3D G3DSA:3.40.50.1390 6 154 1.3E-32 T 14-10-2018 MC28_D061 47e0d54d43f049183d8c67d93610b5cd 205 Pfam PF00239 Resolvase, N terminal domain 6 153 1.7E-28 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_D061 47e0d54d43f049183d8c67d93610b5cd 205 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_D061 47e0d54d43f049183d8c67d93610b5cd 205 SMART SM00857 5 153 2.6E-34 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_D061 47e0d54d43f049183d8c67d93610b5cd 205 SUPERFAMILY SSF53041 5 153 2.49E-33 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_D061 47e0d54d43f049183d8c67d93610b5cd 205 ProSitePatterns PS00398 Site-specific recombinases signature 2. 60 72 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_4220 0da2043e5b570de1b4ba078f42db020e 846 Pfam PF12704 MacB-like periplasmic core domain 10 205 1.6E-10 T 14-10-2018 IPR025857 MacB-like periplasmic core domain MC28_4220 0da2043e5b570de1b4ba078f42db020e 846 Pfam PF02687 FtsX-like permease family 748 834 3.2E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_4220 0da2043e5b570de1b4ba078f42db020e 846 Pfam PF02687 FtsX-like permease family 268 364 1.1E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_4751 97fb26d3e60fb5f57b8047ad39268a8a 278 Gene3D G3DSA:3.30.950.10 109 223 9.2E-41 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 MC28_4751 97fb26d3e60fb5f57b8047ad39268a8a 278 PIRSF PIRSF005917 1 278 4.5E-102 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 MC28_4751 97fb26d3e60fb5f57b8047ad39268a8a 278 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 79 90 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 MC28_4751 97fb26d3e60fb5f57b8047ad39268a8a 278 Gene3D G3DSA:3.40.1010.10 1 108 2.3E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 MC28_4751 97fb26d3e60fb5f57b8047ad39268a8a 278 SUPERFAMILY SSF53790 1 217 6.41E-81 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 MC28_4751 97fb26d3e60fb5f57b8047ad39268a8a 278 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 274 1.4E-81 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 MC28_4751 97fb26d3e60fb5f57b8047ad39268a8a 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 199 1.5E-28 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 MC28_4751 97fb26d3e60fb5f57b8047ad39268a8a 278 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 219 36.455 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 MC28_5107 c358553c61a54f0df560e28e55e9cfd6 332 SUPERFAMILY SSF53850 37 320 8.08E-46 T 14-10-2018 MC28_5107 c358553c61a54f0df560e28e55e9cfd6 332 Pfam PF09084 NMT1/THI5 like 44 258 4.9E-78 T 14-10-2018 IPR015168 SsuA/THI5-like MC28_5107 c358553c61a54f0df560e28e55e9cfd6 332 Gene3D G3DSA:3.40.190.10 116 218 3.9E-101 T 14-10-2018 MC28_5107 c358553c61a54f0df560e28e55e9cfd6 332 Gene3D G3DSA:3.40.190.10 39 327 3.9E-101 T 14-10-2018 MC28_4433 9197ad5ae462286466edee04bccd87b6 371 SUPERFAMILY SSF53756 4 369 1.88E-139 T 14-10-2018 MC28_4433 9197ad5ae462286466edee04bccd87b6 371 Gene3D G3DSA:3.40.50.2000 192 352 1.1E-161 T 14-10-2018 MC28_4433 9197ad5ae462286466edee04bccd87b6 371 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 368 9.8E-167 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 MC28_4433 9197ad5ae462286466edee04bccd87b6 371 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 365 1.1E-120 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 MC28_4433 9197ad5ae462286466edee04bccd87b6 371 Gene3D G3DSA:3.40.50.2000 7 363 1.1E-161 T 14-10-2018 MC28_1849 45ca2f29ca3ee34b05eafa9f7ca646c9 170 Pfam PF04229 GrpB protein 5 162 1.6E-45 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase MC28_1849 45ca2f29ca3ee34b05eafa9f7ca646c9 170 SUPERFAMILY SSF81301 7 167 1.14E-46 T 14-10-2018 MC28_1849 45ca2f29ca3ee34b05eafa9f7ca646c9 170 Gene3D G3DSA:3.30.460.10 1 169 3.3E-51 T 14-10-2018 MC28_0160 dbf0cb56979b31ce0cb247572dca3d40 400 SUPERFAMILY SSF51905 2 303 2.42E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0160 dbf0cb56979b31ce0cb247572dca3d40 400 Pfam PF01266 FAD dependent oxidoreductase 3 390 3.1E-64 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MC28_2908 bdb47dc0c4ffe79653e006e38b92de5c 303 SMART SM00478 138 303 1.6E-23 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 MC28_2908 bdb47dc0c4ffe79653e006e38b92de5c 303 Gene3D G3DSA:1.10.340.30 126 250 6.6E-42 T 14-10-2018 MC28_2908 bdb47dc0c4ffe79653e006e38b92de5c 303 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 137 285 7.8E-15 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 MC28_2908 bdb47dc0c4ffe79653e006e38b92de5c 303 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 234 258 - T 14-10-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 MC28_2908 bdb47dc0c4ffe79653e006e38b92de5c 303 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 36 133 6.0E-6 T 14-10-2018 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357|Reactome: R-HSA-5649702 MC28_2908 bdb47dc0c4ffe79653e006e38b92de5c 303 Gene3D G3DSA:1.10.1670.40 106 301 6.6E-42 T 14-10-2018 MC28_2908 bdb47dc0c4ffe79653e006e38b92de5c 303 SUPERFAMILY SSF48150 116 302 1.19E-43 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 MC28_3783 76a785303bb17db1bdc5422bc8f1db98 190 Pfam PF01381 Helix-turn-helix 20 72 5.4E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3783 76a785303bb17db1bdc5422bc8f1db98 190 Gene3D G3DSA:1.10.260.40 6 81 1.4E-18 T 14-10-2018 MC28_3783 76a785303bb17db1bdc5422bc8f1db98 190 Pfam PF07883 Cupin domain 126 182 6.5E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_3783 76a785303bb17db1bdc5422bc8f1db98 190 Gene3D G3DSA:2.60.120.10 98 190 1.0E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_3783 76a785303bb17db1bdc5422bc8f1db98 190 SUPERFAMILY SSF47413 12 76 7.88E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3783 76a785303bb17db1bdc5422bc8f1db98 190 SMART SM00530 19 74 2.9E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3783 76a785303bb17db1bdc5422bc8f1db98 190 SUPERFAMILY SSF51182 68 186 1.83E-17 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_1710 af8804d436647ebb07ec1b3228769acc 680 Pfam PF03717 Penicillin-binding Protein dimerisation domain 28 275 2.5E-38 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_1710 af8804d436647ebb07ec1b3228769acc 680 SUPERFAMILY SSF56601 291 663 5.63E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1710 af8804d436647ebb07ec1b3228769acc 680 SUPERFAMILY SSF56519 24 290 3.53E-37 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_1710 af8804d436647ebb07ec1b3228769acc 680 Pfam PF00905 Penicillin binding protein transpeptidase domain 321 656 4.3E-66 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_1710 af8804d436647ebb07ec1b3228769acc 680 Gene3D G3DSA:3.40.710.10 290 651 3.3E-221 T 14-10-2018 MC28_1710 af8804d436647ebb07ec1b3228769acc 680 Gene3D G3DSA:3.90.1310.30 31 545 3.3E-221 T 14-10-2018 MC28_1710 af8804d436647ebb07ec1b3228769acc 680 Gene3D G3DSA:1.10.10.1230 56 166 3.3E-221 T 14-10-2018 MC28_4591 4a428c4e2db460a9093ad9b506eeeaca 300 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4591 4a428c4e2db460a9093ad9b506eeeaca 300 Pfam PF00005 ABC transporter 21 156 1.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4591 4a428c4e2db460a9093ad9b506eeeaca 300 SUPERFAMILY SSF52540 3 219 7.65E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4591 4a428c4e2db460a9093ad9b506eeeaca 300 SMART SM00382 29 205 2.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4591 4a428c4e2db460a9093ad9b506eeeaca 300 Gene3D G3DSA:3.40.50.300 1 231 5.2E-65 T 14-10-2018 MC28_5094 4023597c57a83c1d8aae1fbb76b76b4f 561 Gene3D G3DSA:2.60.40.1180 484 561 1.1E-22 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_5094 4023597c57a83c1d8aae1fbb76b76b4f 561 Gene3D G3DSA:3.20.20.80 177 483 1.3E-117 T 14-10-2018 MC28_5094 4023597c57a83c1d8aae1fbb76b76b4f 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 483 555 1.5E-10 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal MC28_5094 4023597c57a83c1d8aae1fbb76b76b4f 561 Gene3D G3DSA:3.90.400.10 117 176 1.6E-34 T 14-10-2018 MC28_5094 4023597c57a83c1d8aae1fbb76b76b4f 561 SUPERFAMILY SSF51445 11 480 2.54E-155 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_5094 4023597c57a83c1d8aae1fbb76b76b4f 561 Pfam PF00128 Alpha amylase, catalytic domain 35 380 1.1E-116 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_5094 4023597c57a83c1d8aae1fbb76b76b4f 561 Gene3D G3DSA:3.20.20.80 1 116 2.6E-51 T 14-10-2018 MC28_5094 4023597c57a83c1d8aae1fbb76b76b4f 561 SMART SM00642 20 422 1.5E-162 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_5094 4023597c57a83c1d8aae1fbb76b76b4f 561 SUPERFAMILY SSF51011 483 560 1.18E-18 T 14-10-2018 MC28_4194 c01616d258f919d56e5c04f42c77c7cb 402 SUPERFAMILY SSF51905 3 207 1.3E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4194 c01616d258f919d56e5c04f42c77c7cb 402 Gene3D G3DSA:3.50.50.100 1 402 2.4E-133 T 14-10-2018 MC28_4194 c01616d258f919d56e5c04f42c77c7cb 402 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 322 1.1E-44 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_4194 c01616d258f919d56e5c04f42c77c7cb 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 5.8E-6 T 14-10-2018 MC28_4194 c01616d258f919d56e5c04f42c77c7cb 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.8E-6 T 14-10-2018 MC28_4194 c01616d258f919d56e5c04f42c77c7cb 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 5.8E-6 T 14-10-2018 MC28_4194 c01616d258f919d56e5c04f42c77c7cb 402 SUPERFAMILY SSF51905 150 332 4.05E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_F068 e620e5a2cf9cadc78d637d947179782e 216 Pfam PF07799 Protein of unknown function (DUF1643) 85 201 6.1E-8 T 14-10-2018 IPR012441 Protein of unknown function DUF1643 MC28_3698 401ea4aa6c357f38535627c02fce6de5 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 4.1E-60 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 MC28_3698 401ea4aa6c357f38535627c02fce6de5 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 36.325 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 MC28_3698 401ea4aa6c357f38535627c02fce6de5 146 Gene3D G3DSA:3.50.80.10 1 146 8.7E-60 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily MC28_3698 401ea4aa6c357f38535627c02fce6de5 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 2.3E-58 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 MC28_3698 401ea4aa6c357f38535627c02fce6de5 146 SUPERFAMILY SSF69500 1 144 7.19E-60 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily MC28_3932 4400506ee5d4094e6f90ade00db72b72 392 PIRSF PIRSF001434 1 387 2.0E-142 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3932 4400506ee5d4094e6f90ade00db72b72 392 SUPERFAMILY SSF53383 26 386 4.3E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3932 4400506ee5d4094e6f90ade00db72b72 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 384 1.6E-140 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3932 4400506ee5d4094e6f90ade00db72b72 392 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 4 385 1.9E-167 T 14-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 MC28_3932 4400506ee5d4094e6f90ade00db72b72 392 Gene3D G3DSA:3.90.1150.10 258 391 1.0E-46 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3932 4400506ee5d4094e6f90ade00db72b72 392 Gene3D G3DSA:3.40.640.10 5 257 1.5E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 Gene3D G3DSA:3.40.50.1000 555 696 2.8E-28 T 14-10-2018 IPR023214 HAD superfamily MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 Pfam PF00690 Cation transporter/ATPase, N-terminus 38 102 1.7E-16 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 PRINTS PR01836 Magnesium-transporting ATPase signature 414 427 2.9E-81 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 PRINTS PR01836 Magnesium-transporting ATPase signature 724 735 2.9E-81 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 PRINTS PR01836 Magnesium-transporting ATPase signature 293 309 2.9E-81 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 PRINTS PR01836 Magnesium-transporting ATPase signature 776 792 2.9E-81 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 PRINTS PR01836 Magnesium-transporting ATPase signature 861 882 2.9E-81 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 PRINTS PR01836 Magnesium-transporting ATPase signature 310 329 2.9E-81 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 PRINTS PR01836 Magnesium-transporting ATPase signature 706 721 2.9E-81 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 PRINTS PR01836 Magnesium-transporting ATPase signature 756 769 2.9E-81 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 PRINTS PR01836 Magnesium-transporting ATPase signature 811 832 2.9E-81 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 Pfam PF00702 haloacid dehalogenase-like hydrolase 376 662 6.9E-21 T 14-10-2018 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 SUPERFAMILY SSF56784 541 689 9.49E-36 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 382 388 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 Gene3D G3DSA:1.20.1110.10 241 394 1.6E-30 T 14-10-2018 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 SUPERFAMILY SSF81665 36 905 2.09E-103 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 29 907 0.0 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 Gene3D G3DSA:3.40.1110.10 395 554 1.3E-59 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 268 398 8.4E-20 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 615 737 1.2E-28 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 Pfam PF00122 E1-E2 ATPase 165 360 8.5E-45 T 14-10-2018 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 SMART SM00831 34 107 3.2E-21 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 SUPERFAMILY SSF81660 348 552 3.92E-42 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 Gene3D G3DSA:2.70.150.20 158 232 3.4E-15 T 14-10-2018 MC28_3435 1b9b52f6710d3b91a6801d5ff91248a1 908 SUPERFAMILY SSF81653 162 280 4.05E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 MC28_G299 5ed626554b1a55d51cabbe29e520ece2 135 SUPERFAMILY SSF81301 5 106 9.0E-17 T 14-10-2018 MC28_G299 5ed626554b1a55d51cabbe29e520ece2 135 Gene3D G3DSA:3.30.460.10 2 103 4.1E-19 T 14-10-2018 MC28_G299 5ed626554b1a55d51cabbe29e520ece2 135 Pfam PF01909 Nucleotidyltransferase domain 10 82 3.6E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 MC28_G038 8019636e01223ecf022c6f28375693f0 320 Gene3D G3DSA:3.40.50.720 3 243 1.2E-88 T 14-10-2018 MC28_G038 8019636e01223ecf022c6f28375693f0 320 SUPERFAMILY SSF51735 1 313 1.26E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_G038 8019636e01223ecf022c6f28375693f0 320 Gene3D G3DSA:3.90.25.10 179 305 1.2E-88 T 14-10-2018 MC28_G038 8019636e01223ecf022c6f28375693f0 320 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 304 4.7E-59 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_2111 35f8823457c91ad25eda3c26e3efe997 232 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 4 186 6.3E-31 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 MC28_2111 35f8823457c91ad25eda3c26e3efe997 232 SUPERFAMILY SSF102645 4 223 1.83E-43 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 MC28_2111 35f8823457c91ad25eda3c26e3efe997 232 Gene3D G3DSA:3.40.50.10300 4 226 1.7E-50 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 MC28_0177 019676418dc3e259dc8999911e00dd5a 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_0177 019676418dc3e259dc8999911e00dd5a 440 Pfam PF00083 Sugar (and other) transporter 17 235 8.0E-28 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 MC28_0177 019676418dc3e259dc8999911e00dd5a 440 Pfam PF07690 Major Facilitator Superfamily 247 424 7.0E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0177 019676418dc3e259dc8999911e00dd5a 440 SUPERFAMILY SSF103473 13 420 1.83E-65 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0177 019676418dc3e259dc8999911e00dd5a 440 Gene3D G3DSA:1.20.1250.20 13 430 8.7E-70 T 14-10-2018 MC28_0177 019676418dc3e259dc8999911e00dd5a 440 ProSitePatterns PS00217 Sugar transport proteins signature 2. 122 147 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_3466 08129965fcdc2020ecf993e9d1143df7 583 SUPERFAMILY SSF52540 8 525 5.05E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3466 08129965fcdc2020ecf993e9d1143df7 583 TIGRFAM TIGR00634 recN: DNA repair protein RecN 5 570 9.4E-189 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 MC28_3466 08129965fcdc2020ecf993e9d1143df7 583 PIRSF PIRSF003128 5 575 1.7E-183 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 MC28_3466 08129965fcdc2020ecf993e9d1143df7 583 SUPERFAMILY SSF52540 5 222 1.29E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3466 08129965fcdc2020ecf993e9d1143df7 583 Gene3D G3DSA:3.40.50.300 285 571 1.8E-53 T 14-10-2018 MC28_3466 08129965fcdc2020ecf993e9d1143df7 583 Gene3D G3DSA:3.40.50.300 5 268 1.4E-49 T 14-10-2018 MC28_3466 08129965fcdc2020ecf993e9d1143df7 583 Pfam PF02463 RecF/RecN/SMC N terminal domain 6 525 3.0E-15 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal MC28_3946 b260949e54c36678be7e48ee63b9869b 285 SUPERFAMILY SSF53474 21 281 2.22E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3946 b260949e54c36678be7e48ee63b9869b 285 Pfam PF00561 alpha/beta hydrolase fold 55 270 1.2E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3946 b260949e54c36678be7e48ee63b9869b 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 2.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3946 b260949e54c36678be7e48ee63b9869b 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 228 242 2.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3946 b260949e54c36678be7e48ee63b9869b 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 2.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_4747 7c6f4dda19eecfdaa8099fac0a47b440 278 Pfam PF04468 PSP1 C-terminal conserved region 64 149 1.6E-32 T 14-10-2018 IPR007557 PSP1, C-terminal MC28_4714 a94fb26d12eb5e254ef49954b3171ff9 239 Gene3D G3DSA:3.40.50.150 1 239 6.4E-88 T 14-10-2018 MC28_4714 a94fb26d12eb5e254ef49954b3171ff9 239 Pfam PF02527 rRNA small subunit methyltransferase G 21 203 9.7E-58 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 MC28_4714 a94fb26d12eb5e254ef49954b3171ff9 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.374 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 MC28_4714 a94fb26d12eb5e254ef49954b3171ff9 239 PIRSF PIRSF003078 1 220 9.3E-60 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 MC28_4714 a94fb26d12eb5e254ef49954b3171ff9 239 SUPERFAMILY SSF53335 1 237 2.43E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4714 a94fb26d12eb5e254ef49954b3171ff9 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 216 7.3E-52 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 MC28_4623 de1c2aad583276e265d608327476b87a 140 Pfam PF07486 Cell Wall Hydrolase 24 129 6.2E-18 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 MC28_4623 de1c2aad583276e265d608327476b87a 140 Gene3D G3DSA:1.10.10.2520 8 92 9.8E-11 T 14-10-2018 MC28_E057 4771307f73faa28987654fdea43a1a6b 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 4.2E-30 T 14-10-2018 MC28_E057 4771307f73faa28987654fdea43a1a6b 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 4.2E-30 T 14-10-2018 MC28_E057 4771307f73faa28987654fdea43a1a6b 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 4.2E-30 T 14-10-2018 MC28_E057 4771307f73faa28987654fdea43a1a6b 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 4.2E-30 T 14-10-2018 MC28_E057 4771307f73faa28987654fdea43a1a6b 335 Gene3D G3DSA:3.90.25.10 180 328 5.8E-100 T 14-10-2018 MC28_E057 4771307f73faa28987654fdea43a1a6b 335 Gene3D G3DSA:3.40.50.720 4 316 5.8E-100 T 14-10-2018 MC28_E057 4771307f73faa28987654fdea43a1a6b 335 SUPERFAMILY SSF51735 1 333 9.53E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_E057 4771307f73faa28987654fdea43a1a6b 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 234 5.3E-57 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_G068 88c467a8c2e957a85b43274059863b56 269 PIRSF PIRSF032442 23 269 9.1E-76 T 14-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 MC28_G068 88c467a8c2e957a85b43274059863b56 269 Gene3D G3DSA:3.90.70.10 73 269 3.5E-68 T 14-10-2018 MC28_G068 88c467a8c2e957a85b43274059863b56 269 Pfam PF13529 Peptidase_C39 like family 78 239 3.4E-33 T 14-10-2018 IPR039564 Peptidase C39-like MC28_4412 0219686f092bd7fa0531a0f495f96026 103 SUPERFAMILY SSF117782 1 103 7.19E-36 T 14-10-2018 IPR035439 UPF0145 domain superfamily MC28_4412 0219686f092bd7fa0531a0f495f96026 103 Pfam PF01906 Putative heavy-metal-binding 1 103 6.5E-37 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 MC28_4412 0219686f092bd7fa0531a0f495f96026 103 Gene3D G3DSA:3.30.110.70 1 103 8.8E-43 T 14-10-2018 MC28_4412 0219686f092bd7fa0531a0f495f96026 103 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 24.046 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 MC28_2090 cc5080933313e6406e5991c11478469a 159 Gene3D G3DSA:3.90.1140.10 2 158 1.2E-21 T 14-10-2018 MC28_2090 cc5080933313e6406e5991c11478469a 159 SUPERFAMILY SSF55144 18 156 2.62E-11 T 14-10-2018 IPR009097 Cyclic phosphodiesterase MC28_2090 cc5080933313e6406e5991c11478469a 159 Pfam PF13563 2'-5' RNA ligase superfamily 5 141 5.0E-14 T 14-10-2018 MC28_0884 a99a9480b842db186fe48672fbfe02dc 432 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 383 427 1.4E-10 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MC28_0884 a99a9480b842db186fe48672fbfe02dc 432 PRINTS PR01005 Flagellar hook-associated protein signature 127 147 2.9E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MC28_0884 a99a9480b842db186fe48672fbfe02dc 432 PRINTS PR01005 Flagellar hook-associated protein signature 160 184 2.9E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MC28_0884 a99a9480b842db186fe48672fbfe02dc 432 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.9E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MC28_0884 a99a9480b842db186fe48672fbfe02dc 432 SUPERFAMILY SSF64518 139 432 1.1E-15 T 14-10-2018 MC28_0884 a99a9480b842db186fe48672fbfe02dc 432 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 428 1.0E-77 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 220 368 4.3E-56 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 1 108 2.2E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 112 208 1.8E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 Gene3D G3DSA:2.40.110.10 112 224 7.3E-41 T 14-10-2018 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 Gene3D G3DSA:1.10.540.10 1 110 2.6E-42 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 114 126 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 PIRSF PIRSF016578 3 368 3.4E-22 T 14-10-2018 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 Gene3D G3DSA:1.20.140.10 225 370 3.3E-58 T 14-10-2018 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 SUPERFAMILY SSF47203 219 368 4.03E-61 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 SUPERFAMILY SSF56645 1 233 5.63E-85 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 MC28_1729 4486a8c81e1ae19b0f225495f738076a 371 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 327 346 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_4372 0c5c60c98295071e4fce94c8f925789c 311 Pfam PF04198 Putative sugar-binding domain 59 305 1.4E-69 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 MC28_4372 0c5c60c98295071e4fce94c8f925789c 311 SUPERFAMILY SSF46785 2 50 4.39E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4372 0c5c60c98295071e4fce94c8f925789c 311 SUPERFAMILY SSF100950 59 305 8.97E-69 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_4372 0c5c60c98295071e4fce94c8f925789c 311 Gene3D G3DSA:1.10.10.10 1 60 4.8E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4372 0c5c60c98295071e4fce94c8f925789c 311 Gene3D G3DSA:3.40.50.1360 61 307 4.4E-82 T 14-10-2018 MC28_2290 00ce12c22c15e3c723b44bb5eefa47cc 867 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 316 7.5E-95 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 MC28_2290 00ce12c22c15e3c723b44bb5eefa47cc 867 SUPERFAMILY SSF52009 758 865 2.49E-27 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 MC28_2290 00ce12c22c15e3c723b44bb5eefa47cc 867 Gene3D G3DSA:3.50.30.10 764 867 1.3E-31 T 14-10-2018 MC28_2290 00ce12c22c15e3c723b44bb5eefa47cc 867 Gene3D G3DSA:3.30.470.20 185 314 3.0E-45 T 14-10-2018 MC28_2290 00ce12c22c15e3c723b44bb5eefa47cc 867 Gene3D G3DSA:3.30.1490.20 1 184 1.9E-68 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 MC28_2290 00ce12c22c15e3c723b44bb5eefa47cc 867 Pfam PF00391 PEP-utilising enzyme, mobile domain 791 862 1.2E-21 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 MC28_2290 00ce12c22c15e3c723b44bb5eefa47cc 867 SUPERFAMILY SSF56059 1 342 2.0E-94 T 14-10-2018 MC28_0143 207d5cb1b57a6060de8ccf27a41ad78c 290 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 268 6.8E-47 T 14-10-2018 MC28_0143 207d5cb1b57a6060de8ccf27a41ad78c 290 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 241 7.4E-17 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 MC28_0143 207d5cb1b57a6060de8ccf27a41ad78c 290 Gene3D G3DSA:3.40.50.1000 5 264 5.0E-68 T 14-10-2018 IPR023214 HAD superfamily MC28_0143 207d5cb1b57a6060de8ccf27a41ad78c 290 Gene3D G3DSA:3.30.1240.10 83 196 5.0E-68 T 14-10-2018 MC28_0143 207d5cb1b57a6060de8ccf27a41ad78c 290 SUPERFAMILY SSF56784 2 273 8.42E-51 T 14-10-2018 IPR036412 HAD-like superfamily MC28_0005 993dbc0def3fd9598e006c464153f2b8 237 SUPERFAMILY SSF48613 5 221 4.75E-76 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 MC28_0005 993dbc0def3fd9598e006c464153f2b8 237 Gene3D G3DSA:1.20.910.10 4 233 1.8E-73 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 MC28_0005 993dbc0def3fd9598e006c464153f2b8 237 Pfam PF03070 TENA/THI-4/PQQC family 16 222 2.2E-60 T 14-10-2018 IPR004305 Thiaminase-2/PQQC MC28_0005 993dbc0def3fd9598e006c464153f2b8 237 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 17 223 2.8E-73 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 MC28_0005 993dbc0def3fd9598e006c464153f2b8 237 PIRSF PIRSF003170 3 224 1.5E-32 T 14-10-2018 IPR026285 TenA_E protein MC28_4943 636fbaf1f7e3d53dc62a3a2045f7eb68 116 SUPERFAMILY SSF50118 2 113 6.54E-41 T 14-10-2018 MC28_4943 636fbaf1f7e3d53dc62a3a2045f7eb68 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 5.1E-32 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 MC28_4943 636fbaf1f7e3d53dc62a3a2045f7eb68 116 PIRSF PIRSF033490 1 113 2.1E-38 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 MC28_4943 636fbaf1f7e3d53dc62a3a2045f7eb68 116 Gene3D G3DSA:2.30.30.110 1 116 6.3E-53 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 SUPERFAMILY SSF54631 74 205 3.54E-23 T 14-10-2018 MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 Gene3D G3DSA:3.10.580.10 63 210 3.5E-57 T 14-10-2018 MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 SUPERFAMILY SSF46785 5 79 3.37E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 Pfam PF00571 CBS domain 82 134 8.0E-6 T 14-10-2018 IPR000644 CBS domain MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 Pfam PF00571 CBS domain 147 204 2.4E-5 T 14-10-2018 IPR000644 CBS domain MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 SMART SM00116 86 134 0.0033 T 14-10-2018 IPR000644 CBS domain MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 SMART SM00116 153 204 0.41 T 14-10-2018 IPR000644 CBS domain MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 Gene3D G3DSA:1.10.10.10 5 62 8.5E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 Pfam PF08279 HTH domain 9 61 5.7E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 MC28_3588 dec6a16c319e317b61b4a11127a32b22 210 PIRSF PIRSF026546 4 210 2.9E-101 T 14-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS MC28_2377 8e7eafc8308676c6b7b50e20fafae915 380 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 343 375 4.3E-4 T 14-10-2018 MC28_2377 8e7eafc8308676c6b7b50e20fafae915 380 SUPERFAMILY SSF58104 139 364 3.79E-5 T 14-10-2018 MC28_2143 99e9f7089acb82b5dbae1791c9d5c99c 358 Pfam PF01817 Chorismate mutase type II 10 87 1.3E-18 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 MC28_2143 99e9f7089acb82b5dbae1791c9d5c99c 358 SUPERFAMILY SSF51569 58 352 6.14E-102 T 14-10-2018 MC28_2143 99e9f7089acb82b5dbae1791c9d5c99c 358 Gene3D G3DSA:1.20.59.10 8 92 3.7E-29 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 MC28_2143 99e9f7089acb82b5dbae1791c9d5c99c 358 Gene3D G3DSA:3.20.20.70 93 356 4.1E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2143 99e9f7089acb82b5dbae1791c9d5c99c 358 SMART SM00830 10 89 3.3E-24 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 MC28_2143 99e9f7089acb82b5dbae1791c9d5c99c 358 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 351 7.3E-123 T 14-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 MC28_2143 99e9f7089acb82b5dbae1791c9d5c99c 358 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 101 2.2E-43 T 14-10-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 MC28_2143 99e9f7089acb82b5dbae1791c9d5c99c 358 SUPERFAMILY SSF48600 5 88 1.68E-21 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 MC28_2143 99e9f7089acb82b5dbae1791c9d5c99c 358 Pfam PF00793 DAHP synthetase I family 110 351 2.7E-81 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 MC28_5037 71c0b9ae92494184226256ab727798ea 301 Gene3D G3DSA:2.60.200.40 131 286 6.6E-44 T 14-10-2018 MC28_5037 71c0b9ae92494184226256ab727798ea 301 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 127 1.7E-38 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 MC28_5037 71c0b9ae92494184226256ab727798ea 301 SMART SM00046 4 126 6.3E-9 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 MC28_5037 71c0b9ae92494184226256ab727798ea 301 SUPERFAMILY SSF111331 1 296 4.32E-89 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily MC28_5037 71c0b9ae92494184226256ab727798ea 301 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 2 294 4.5E-107 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase MC28_5037 71c0b9ae92494184226256ab727798ea 301 Gene3D G3DSA:3.40.50.10330 1 130 2.0E-48 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 MC28_4164 8b72520dbe628f58ff9f9cb03d77f9ec 331 SUPERFAMILY SSF116726 283 329 4.45E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_4164 8b72520dbe628f58ff9f9cb03d77f9ec 331 SUPERFAMILY SSF81324 14 136 2.49E-23 T 14-10-2018 MC28_4164 8b72520dbe628f58ff9f9cb03d77f9ec 331 SUPERFAMILY SSF51735 115 251 2.56E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4164 8b72520dbe628f58ff9f9cb03d77f9ec 331 Gene3D G3DSA:3.40.50.720 97 238 1.3E-23 T 14-10-2018 MC28_4164 8b72520dbe628f58ff9f9cb03d77f9ec 331 Pfam PF07885 Ion channel 23 95 1.7E-13 T 14-10-2018 IPR013099 Potassium channel domain MC28_4164 8b72520dbe628f58ff9f9cb03d77f9ec 331 Pfam PF02254 TrkA-N domain 118 238 1.2E-12 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 MC28_4164 8b72520dbe628f58ff9f9cb03d77f9ec 331 Gene3D G3DSA:1.10.287.70 3 96 9.0E-20 T 14-10-2018 MC28_2930 21380d5bf9e0306bce791c0a84baf47d 315 SMART SM00148 34 180 1.1E-58 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_2930 21380d5bf9e0306bce791c0a84baf47d 315 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 45 180 4.7E-15 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_2930 21380d5bf9e0306bce791c0a84baf47d 315 Gene3D G3DSA:3.20.20.190 18 315 8.3E-122 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_2930 21380d5bf9e0306bce791c0a84baf47d 315 SUPERFAMILY SSF51695 19 310 8.89E-62 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_4981 12c557ca3da8fa40b628fcbcc58a0a34 643 Gene3D G3DSA:3.40.50.2000 74 353 2.1E-32 T 14-10-2018 MC28_4981 12c557ca3da8fa40b628fcbcc58a0a34 643 Pfam PF00534 Glycosyl transferases group 1 180 336 2.2E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_4981 12c557ca3da8fa40b628fcbcc58a0a34 643 SUPERFAMILY SSF53448 368 612 5.72E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4981 12c557ca3da8fa40b628fcbcc58a0a34 643 SUPERFAMILY SSF53756 6 363 2.51E-43 T 14-10-2018 MC28_4981 12c557ca3da8fa40b628fcbcc58a0a34 643 Gene3D G3DSA:3.90.550.10 360 605 3.9E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4981 12c557ca3da8fa40b628fcbcc58a0a34 643 Pfam PF00535 Glycosyl transferase family 2 370 484 2.1E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_4981 12c557ca3da8fa40b628fcbcc58a0a34 643 Gene3D G3DSA:3.40.50.2000 166 349 2.1E-32 T 14-10-2018 MC28_4044 47ffd5568cbfba44e22bd89d509c6576 358 Pfam PF10776 Protein of unknown function (DUF2600) 24 353 4.0E-153 T 14-10-2018 IPR019712 Protein of unknown function DUF2600 MC28_2934 7cc3bfb4b835b73237d6bea85124b5e1 639 PIRSF PIRSF005091 1 623 5.3E-172 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like MC28_2934 7cc3bfb4b835b73237d6bea85124b5e1 639 Pfam PF00884 Sulfatase 248 538 4.2E-38 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 MC28_2934 7cc3bfb4b835b73237d6bea85124b5e1 639 Gene3D G3DSA:3.40.720.10 241 548 8.2E-74 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_2934 7cc3bfb4b835b73237d6bea85124b5e1 639 SUPERFAMILY SSF53649 246 619 9.72E-73 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_4523 358755378f974b295773468682c305be 339 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 8 327 2.9E-124 T 14-10-2018 IPR014225 Sporulation stage II, protein D firmicutes MC28_4523 358755378f974b295773468682c305be 339 Pfam PF08486 Stage II sporulation protein 65 167 3.7E-27 T 14-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal MC28_4523 358755378f974b295773468682c305be 339 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 70 326 1.7E-74 T 14-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 MC28_4317 41bac1db858e9d3362444d7c28fcc5c3 107 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 29 103 4.8E-11 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core MC28_4317 41bac1db858e9d3362444d7c28fcc5c3 107 SUPERFAMILY SSF101386 1 104 7.36E-23 T 14-10-2018 MC28_4317 41bac1db858e9d3362444d7c28fcc5c3 107 PIRSF PIRSF036521 1 107 3.0E-53 T 14-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related MC28_4317 41bac1db858e9d3362444d7c28fcc5c3 107 Gene3D G3DSA:1.10.287.1080 2 102 5.1E-23 T 14-10-2018 MC28_3606 e62694467e5a604f7c2725318207ada3 191 Gene3D G3DSA:3.90.20.20 2 134 2.7E-25 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 PRINTS PR00773 GrpE protein signature 143 158 1.3E-30 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 PRINTS PR00773 GrpE protein signature 89 104 1.3E-30 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 PRINTS PR00773 GrpE protein signature 170 189 1.3E-30 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 PRINTS PR00773 GrpE protein signature 61 77 1.3E-30 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 SUPERFAMILY SSF51064 136 191 5.49E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 SUPERFAMILY SSF58014 41 135 2.75E-25 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 Gene3D G3DSA:2.30.22.10 135 191 3.5E-25 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 Pfam PF01025 GrpE 28 191 1.0E-54 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 Hamap MF_01151 Protein GrpE [grpE]. 5 191 21.315 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 MC28_3606 e62694467e5a604f7c2725318207ada3 191 ProSitePatterns PS01071 grpE protein signature. 146 189 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 MC28_2020 d9d9aedfc933c65e023a445a2922e1c8 494 SUPERFAMILY SSF53720 12 492 1.83E-182 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_2020 d9d9aedfc933c65e023a445a2922e1c8 494 Gene3D G3DSA:3.40.605.10 24 487 2.6E-209 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_2020 d9d9aedfc933c65e023a445a2922e1c8 494 Gene3D G3DSA:3.40.309.10 270 459 2.6E-209 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_2020 d9d9aedfc933c65e023a445a2922e1c8 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 MC28_2020 d9d9aedfc933c65e023a445a2922e1c8 494 Pfam PF00171 Aldehyde dehydrogenase family 31 489 1.1E-187 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_4988 8b5a0da624183a8d9d186866038bb386 314 Gene3D G3DSA:1.10.287.130 78 152 1.3E-19 T 14-10-2018 MC28_4988 8b5a0da624183a8d9d186866038bb386 314 SMART SM00387 198 310 7.0E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4988 8b5a0da624183a8d9d186866038bb386 314 Gene3D G3DSA:3.30.565.10 156 311 1.1E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4988 8b5a0da624183a8d9d186866038bb386 314 SMART SM00388 85 152 9.3E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4988 8b5a0da624183a8d9d186866038bb386 314 Pfam PF00512 His Kinase A (phospho-acceptor) domain 85 151 5.0E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4988 8b5a0da624183a8d9d186866038bb386 314 SUPERFAMILY SSF47384 68 153 1.57E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_4988 8b5a0da624183a8d9d186866038bb386 314 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 200 308 1.9E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4988 8b5a0da624183a8d9d186866038bb386 314 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 307 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4988 8b5a0da624183a8d9d186866038bb386 314 PRINTS PR00344 Bacterial sensor protein C-terminal signature 235 249 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4988 8b5a0da624183a8d9d186866038bb386 314 PRINTS PR00344 Bacterial sensor protein C-terminal signature 253 263 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4988 8b5a0da624183a8d9d186866038bb386 314 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 288 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4988 8b5a0da624183a8d9d186866038bb386 314 SUPERFAMILY SSF55874 141 308 5.76E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1668 a04cb0b99382c56d48922b691253f357 101 Gene3D G3DSA:3.40.50.2300 1 101 4.3E-30 T 14-10-2018 MC28_1668 a04cb0b99382c56d48922b691253f357 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 8.9E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 MC28_1668 a04cb0b99382c56d48922b691253f357 101 SUPERFAMILY SSF52794 1 100 1.31E-27 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 MC28_1461 d9debcb7aafc391777a684b63a4ebe6d 136 PIRSF PIRSF034303 7 136 1.9E-48 T 14-10-2018 IPR012543 Protein of unknown function DUF1694 MC28_1461 d9debcb7aafc391777a684b63a4ebe6d 136 Gene3D G3DSA:3.30.1330.30 6 136 5.0E-45 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like MC28_1461 d9debcb7aafc391777a684b63a4ebe6d 136 Pfam PF07997 Protein of unknown function (DUF1694) 10 125 4.0E-38 T 14-10-2018 IPR012543 Protein of unknown function DUF1694 MC28_1461 d9debcb7aafc391777a684b63a4ebe6d 136 SUPERFAMILY SSF160515 10 133 1.1E-38 T 14-10-2018 MC28_3665 131888bef1f4bcb439e42185a7d9ebe3 231 Pfam PF01048 Phosphorylase superfamily 2 227 4.6E-53 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 MC28_3665 131888bef1f4bcb439e42185a7d9ebe3 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 4.4E-116 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_3665 131888bef1f4bcb439e42185a7d9ebe3 231 SUPERFAMILY SSF53167 2 230 1.83E-71 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 MC28_3665 131888bef1f4bcb439e42185a7d9ebe3 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 46.503 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_3665 131888bef1f4bcb439e42185a7d9ebe3 231 Gene3D G3DSA:3.40.50.1580 1 231 3.0E-74 T 14-10-2018 MC28_1624 919e24bf2e723a495ba7a6d9dd6a8c44 217 Pfam PF00753 Metallo-beta-lactamase superfamily 22 202 1.1E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_1624 919e24bf2e723a495ba7a6d9dd6a8c44 217 Gene3D G3DSA:3.60.15.10 5 217 1.0E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1624 919e24bf2e723a495ba7a6d9dd6a8c44 217 SUPERFAMILY SSF56281 1 214 4.19E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1624 919e24bf2e723a495ba7a6d9dd6a8c44 217 SMART SM00849 18 202 1.1E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 SUPERFAMILY SSF52540 820 1067 2.1E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 SMART SM00487 613 799 2.5E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 Pfam PF08455 Bacterial SNF2 helicase associated 239 610 5.4E-84 T 14-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 Pfam PF00176 SNF2 family N-terminal domain 572 890 1.1E-48 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 Gene3D G3DSA:3.40.50.10810 587 827 2.5E-59 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 Gene3D G3DSA:3.40.50.300 828 1026 1.5E-84 T 14-10-2018 MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 SUPERFAMILY SSF52540 597 818 1.78E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 Gene3D G3DSA:1.20.120.850 840 1062 1.5E-84 T 14-10-2018 MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 SMART SM00490 930 1012 1.2E-24 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 Pfam PF00271 Helicase conserved C-terminal domain 901 1012 2.1E-22 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_0996 bdf11cfa348d01e36744cae5830f1842 1068 Pfam PF04434 SWIM zinc finger 53 91 3.0E-4 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 MC28_G016 c607409954d355cfc7ee8ad63bbc17c3 372 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_G016 c607409954d355cfc7ee8ad63bbc17c3 372 Pfam PF01098 Cell cycle protein 2 364 8.3E-88 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_4055 5168b2ed5b8ed53c0560e90ef6bfc8a2 127 Pfam PF03899 ATP synthase I chain 13 103 6.8E-14 T 14-10-2018 IPR005598 ATP synthase protein I MC28_4055 5168b2ed5b8ed53c0560e90ef6bfc8a2 127 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 27 123 1.0E-51 T 14-10-2018 MC28_F048 6d8cca6624adfa4a389ec57b06629457 372 Gene3D G3DSA:3.20.20.70 5 314 1.4E-43 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_F048 6d8cca6624adfa4a389ec57b06629457 372 SMART SM00729 11 213 0.0026 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_F048 6d8cca6624adfa4a389ec57b06629457 372 PIRSF PIRSF037420 3 372 1.0E-95 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E MC28_F048 6d8cca6624adfa4a389ec57b06629457 372 Pfam PF13186 Iron-sulfur cluster-binding domain 279 332 3.9E-5 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain MC28_F048 6d8cca6624adfa4a389ec57b06629457 372 Pfam PF13353 4Fe-4S single cluster domain 14 123 1.3E-6 T 14-10-2018 MC28_F048 6d8cca6624adfa4a389ec57b06629457 372 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 5 363 1.0E-156 T 14-10-2018 IPR027634 Radical SAM protein, BA_1875 family MC28_F048 6d8cca6624adfa4a389ec57b06629457 372 Pfam PF04055 Radical SAM superfamily 17 158 9.9E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_F048 6d8cca6624adfa4a389ec57b06629457 372 SUPERFAMILY SSF102114 8 340 1.06E-64 T 14-10-2018 MC28_E113 1d83b1ea192fbcd75e3fe8c4e60a9e43 181 SUPERFAMILY SSF56849 9 153 1.31E-30 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E113 1d83b1ea192fbcd75e3fe8c4e60a9e43 181 Gene3D G3DSA:1.20.190.10 38 170 8.6E-29 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_5336 9a11edd78cf40cdc1169c84e14e32823 539 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 535 1.1E-183 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 MC28_5336 9a11edd78cf40cdc1169c84e14e32823 539 Pfam PF02652 L-lactate permease 16 530 2.1E-176 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 MC28_5399 194d8019e3c118d4170960e891fe4a8c 353 SUPERFAMILY SSF50129 3 184 2.36E-59 T 14-10-2018 IPR011032 GroES-like superfamily MC28_5399 194d8019e3c118d4170960e891fe4a8c 353 Pfam PF00107 Zinc-binding dehydrogenase 185 311 6.5E-29 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MC28_5399 194d8019e3c118d4170960e891fe4a8c 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 71 85 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 MC28_5399 194d8019e3c118d4170960e891fe4a8c 353 Gene3D G3DSA:3.90.180.10 12 337 2.5E-114 T 14-10-2018 MC28_5399 194d8019e3c118d4170960e891fe4a8c 353 SUPERFAMILY SSF51735 149 316 1.08E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_5399 194d8019e3c118d4170960e891fe4a8c 353 Pfam PF13823 Alcohol dehydrogenase GroES-associated 4 25 3.6E-6 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated MC28_5399 194d8019e3c118d4170960e891fe4a8c 353 Gene3D G3DSA:3.40.50.720 162 298 2.5E-114 T 14-10-2018 MC28_5399 194d8019e3c118d4170960e891fe4a8c 353 SMART SM00829 11 350 5.2E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_5399 194d8019e3c118d4170960e891fe4a8c 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 1.1E-35 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_0795 486cb056eca0d32055a134a92766af68 298 Gene3D G3DSA:1.10.150.130 1 100 2.8E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_0795 486cb056eca0d32055a134a92766af68 298 Pfam PF00589 Phage integrase family 105 278 2.2E-29 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_0795 486cb056eca0d32055a134a92766af68 298 Gene3D G3DSA:1.10.443.10 101 294 3.0E-37 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_0795 486cb056eca0d32055a134a92766af68 298 Pfam PF13102 Phage integrase SAM-like domain 2 95 5.3E-10 T 14-10-2018 IPR025269 Phage integrase SAM-like domain MC28_0795 486cb056eca0d32055a134a92766af68 298 SUPERFAMILY SSF56349 2 285 5.59E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_5025 826ccd351dcab377ede84d5e9b502036 195 Pfam PF00857 Isochorismatase family 11 160 7.4E-34 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_5025 826ccd351dcab377ede84d5e9b502036 195 Gene3D G3DSA:3.40.50.850 8 194 4.6E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_5025 826ccd351dcab377ede84d5e9b502036 195 SUPERFAMILY SSF52499 10 188 3.66E-52 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_4275 353bd60928725b129a02978035873347 48 Pfam PF14115 YuzL-like protein 3 42 1.7E-17 T 14-10-2018 IPR025625 YuzL-like protein MC28_2530 cfc612ef02456e6e26329fcecc7057de 357 SUPERFAMILY SSF110296 19 337 2.35E-45 T 14-10-2018 MC28_2530 cfc612ef02456e6e26329fcecc7057de 357 Gene3D G3DSA:2.130.10.10 6 339 2.7E-61 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_C100 002ef9a3b244dffedd8a5576fdb60155 238 Pfam PF13610 DDE domain 77 215 7.9E-50 T 14-10-2018 IPR032874 DDE domain MC28_C100 002ef9a3b244dffedd8a5576fdb60155 238 SUPERFAMILY SSF53098 75 194 2.28E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_C100 002ef9a3b244dffedd8a5576fdb60155 238 Gene3D G3DSA:3.30.420.10 71 233 1.2E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_0432 75a0b1289fb55c6e7452690ba25b339b 128 Gene3D G3DSA:2.60.120.40 1 128 2.5E-56 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 130 172 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 Gene3D G3DSA:3.40.10.10 1 70 9.6E-30 T 14-10-2018 IPR035451 Ada-like domain superfamily MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 SUPERFAMILY SSF57884 4 83 4.58E-30 T 14-10-2018 IPR035451 Ada-like domain superfamily MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 Gene3D G3DSA:1.10.10.60 127 182 8.0E-18 T 14-10-2018 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 Pfam PF02805 Metal binding domain of Ada 6 68 1.1E-29 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 PIRSF PIRSF000408 1 184 2.5E-82 T 14-10-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 SMART SM00342 93 176 5.3E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 SUPERFAMILY SSF46689 130 179 5.82E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 Gene3D G3DSA:1.10.10.60 75 126 1.1E-17 T 14-10-2018 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 Pfam PF12833 Helix-turn-helix domain 99 177 1.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 145 160 8.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 160 176 8.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_2906 fa4d386b3d8861f862dcc5c19d676c16 192 SUPERFAMILY SSF46689 77 128 1.21E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_5031 9df3892d53c2cdf743bce7f38f9a287e 406 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 20 314 2.8E-85 T 14-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 MC28_5031 9df3892d53c2cdf743bce7f38f9a287e 406 SUPERFAMILY SSF49764 334 400 1.2E-5 T 14-10-2018 IPR008978 HSP20-like chaperone MC28_5031 9df3892d53c2cdf743bce7f38f9a287e 406 SUPERFAMILY SSF52540 15 306 7.07E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5031 9df3892d53c2cdf743bce7f38f9a287e 406 Gene3D G3DSA:3.40.50.300 8 328 4.1E-87 T 14-10-2018 MC28_5031 9df3892d53c2cdf743bce7f38f9a287e 406 Gene3D G3DSA:2.60.40.790 331 403 2.3E-21 T 14-10-2018 IPR008978 HSP20-like chaperone MC28_5031 9df3892d53c2cdf743bce7f38f9a287e 406 Pfam PF02374 Anion-transporting ATPase 15 316 8.2E-98 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 MC28_2927 e58d55767d431ed702a41d4d0483c16f 227 SUPERFAMILY SSF102588 5 213 1.24E-46 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 MC28_2927 e58d55767d431ed702a41d4d0483c16f 227 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 6 222 1.4E-94 T 14-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 MC28_2927 e58d55767d431ed702a41d4d0483c16f 227 Pfam PF02585 GlcNAc-PI de-N-acetylase 9 138 5.4E-27 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 MC28_2927 e58d55767d431ed702a41d4d0483c16f 227 Gene3D G3DSA:3.40.50.10320 1 218 1.7E-47 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 MC28_2153 7683351cfc6e2a6c42d5897cb2fea8f7 126 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 107 3.0E-8 T 14-10-2018 MC28_2153 7683351cfc6e2a6c42d5897cb2fea8f7 126 SUPERFAMILY SSF54593 1 124 1.34E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2153 7683351cfc6e2a6c42d5897cb2fea8f7 126 Gene3D G3DSA:3.10.180.10 1 126 8.3E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_F137 c20959e8c00062a19f73e7a359bffb7d 394 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 342 366 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_F137 c20959e8c00062a19f73e7a359bffb7d 394 Pfam PF01098 Cell cycle protein 15 382 9.7E-86 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_4989 e1071b8eb22aa6f291ff58397cd5aa73 237 SMART SM00862 154 230 3.0E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4989 e1071b8eb22aa6f291ff58397cd5aa73 237 Pfam PF00072 Response regulator receiver domain 6 114 5.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4989 e1071b8eb22aa6f291ff58397cd5aa73 237 SMART SM00448 4 114 5.7E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4989 e1071b8eb22aa6f291ff58397cd5aa73 237 Gene3D G3DSA:1.10.10.10 130 236 1.6E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4989 e1071b8eb22aa6f291ff58397cd5aa73 237 Gene3D G3DSA:3.40.50.2300 1 129 9.8E-39 T 14-10-2018 MC28_4989 e1071b8eb22aa6f291ff58397cd5aa73 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 6.0E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4989 e1071b8eb22aa6f291ff58397cd5aa73 237 SUPERFAMILY SSF52172 2 129 6.55E-42 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4989 e1071b8eb22aa6f291ff58397cd5aa73 237 SUPERFAMILY SSF46894 131 231 4.82E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 2497 2586 9.5E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1846 1937 2.7E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1381 1471 2.4E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1102 1193 3.9E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1568 1656 2.3E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1290 1379 4.2E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1009 1100 3.9E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 824 915 4.6E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1939 2030 1.9E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 2404 2495 1.4E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 916 1008 4.6E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 2032 2123 2.2E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 2125 2215 1.4E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1754 1844 2.7E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 2218 2309 2.1E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 2311 2402 1.9E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49401 11 144 2.61E-29 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1482 1547 3.14E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1204 1268 2.55E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Pfam PF11766 Cell-wall agglutinin N-terminal ligand-sugar binding 46 116 2.3E-7 T 14-10-2018 IPR024672 Agglutinin-like protein, N-terminal MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 2133 2198 1.73E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1017 1082 9.02E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 2505 2570 6.28E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.1280 6 150 4.5E-26 T 14-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 2587 2680 7.3E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 545 636 2.5E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1657 1753 5.0E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1855 1918 6.28E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 556 620 7.45E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 831 896 1.02E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1668 1733 1.41E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49401 159 292 1.22E-26 T 14-10-2018 IPR008966 Adhesion domain superfamily MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1948 2012 1.61E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 302 436 5.0E-18 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 645 710 1.26E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1296 1360 1.06E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 2412 2476 2.04E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.740 303 450 7.7E-23 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1762 1825 6.28E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 465 529 2.43E-6 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 2320 2384 1.61E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 638 730 2.9E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 457 544 3.9E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 732 823 4.1E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1476 1567 4.0E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Gene3D G3DSA:2.60.40.10 1196 1289 1.4E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2734 2767 0.0025 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1389 1454 2.39E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1110 1175 4.71E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 2601 2663 1.22E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 924 989 1.02E-8 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 2040 2104 2.39E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 738 803 3.92E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 Pfam PF05737 Collagen binding domain 159 282 9.9E-18 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 1575 1640 4.32E-7 T 14-10-2018 MC28_0293 3c4ffd9f4345576805d6e9f867aff597 2768 SUPERFAMILY SSF49478 2226 2291 1.88E-8 T 14-10-2018 MC28_2833 1fe894e9d278612eda76906f3e74fb56 79 Hamap MF_01103 UPF0291 protein . 2 60 16.358 T 14-10-2018 IPR009242 Protein of unknown function DUF896 MC28_2833 1fe894e9d278612eda76906f3e74fb56 79 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 68 6.7E-28 T 14-10-2018 IPR009242 Protein of unknown function DUF896 MC28_2833 1fe894e9d278612eda76906f3e74fb56 79 Gene3D G3DSA:1.10.287.540 1 58 1.9E-20 T 14-10-2018 MC28_2833 1fe894e9d278612eda76906f3e74fb56 79 SUPERFAMILY SSF158221 1 42 2.62E-13 T 14-10-2018 MC28_3215 a4c6728968e451e0cb05bcf401fb8305 188 SUPERFAMILY SSF53335 1 181 4.46E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3215 a4c6728968e451e0cb05bcf401fb8305 188 Gene3D G3DSA:3.40.50.150 1 188 2.0E-56 T 14-10-2018 MC28_3215 a4c6728968e451e0cb05bcf401fb8305 188 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 MC28_3215 a4c6728968e451e0cb05bcf401fb8305 188 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 5.8E-52 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 MC28_3215 a4c6728968e451e0cb05bcf401fb8305 188 Pfam PF03602 Conserved hypothetical protein 95 1 181 2.4E-58 T 14-10-2018 MC28_3215 a4c6728968e451e0cb05bcf401fb8305 188 PIRSF PIRSF004553 1 184 5.3E-51 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 MC28_3973 0fd2ee7f3ef1da592fc4b063bf821f77 270 Hamap MF_01548 UPF0354 protein . 3 264 47.967 T 14-10-2018 IPR010838 Protein of unknown unction DUF1444 MC28_3973 0fd2ee7f3ef1da592fc4b063bf821f77 270 PIRSF PIRSF012562 1 264 6.2E-137 T 14-10-2018 IPR010838 Protein of unknown unction DUF1444 MC28_3973 0fd2ee7f3ef1da592fc4b063bf821f77 270 Pfam PF07285 Protein of unknown function (DUF1444) 3 263 2.8E-121 T 14-10-2018 IPR010838 Protein of unknown unction DUF1444 MC28_4029 d0f4d92fd32ca4485bbe80715681cda9 94 Pfam PF10732 Protein of unknown function (DUF2524) 8 91 1.9E-34 T 14-10-2018 IPR019668 Uncharacterised protein family YtzC MC28_0817 16b5189d0933350c60c17972d37c2a54 143 SUPERFAMILY SSF56112 15 99 9.41E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_0817 16b5189d0933350c60c17972d37c2a54 143 Gene3D G3DSA:3.90.1200.10 2 143 9.7E-20 T 14-10-2018 MC28_0817 16b5189d0933350c60c17972d37c2a54 143 Pfam PF01636 Phosphotransferase enzyme family 6 106 4.8E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 26 212 1.9E-41 T 14-10-2018 MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 Gene3D G3DSA:3.50.50.60 19 367 3.0E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 5.5E-5 T 14-10-2018 MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 24 46 5.5E-5 T 14-10-2018 MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 5.5E-5 T 14-10-2018 MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 25 44 9.7E-8 T 14-10-2018 MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 9.7E-8 T 14-10-2018 MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 PIRSF PIRSF000332 21 216 1.1E-17 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 PIRSF PIRSF000332 237 332 4.8E-4 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 MC28_2596 d6000d2c7d06eafed697af830f0b6afe 368 SUPERFAMILY SSF51905 21 264 7.97E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1151 1fccc41a98c4c164ed523163292a155b 853 Pfam PF00535 Glycosyl transferase family 2 325 451 2.9E-21 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_1151 1fccc41a98c4c164ed523163292a155b 853 Pfam PF00535 Glycosyl transferase family 2 19 151 3.3E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_1151 1fccc41a98c4c164ed523163292a155b 853 SUPERFAMILY SSF53448 322 550 4.75E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1151 1fccc41a98c4c164ed523163292a155b 853 Gene3D G3DSA:3.90.550.10 2 263 1.7E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1151 1fccc41a98c4c164ed523163292a155b 853 Gene3D G3DSA:3.90.550.10 283 584 4.0E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1151 1fccc41a98c4c164ed523163292a155b 853 Gene3D G3DSA:3.40.50.150 686 848 3.1E-20 T 14-10-2018 MC28_1151 1fccc41a98c4c164ed523163292a155b 853 SUPERFAMILY SSF53335 699 824 7.87E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1151 1fccc41a98c4c164ed523163292a155b 853 SUPERFAMILY SSF53448 16 244 2.06E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1151 1fccc41a98c4c164ed523163292a155b 853 Pfam PF08241 Methyltransferase domain 723 770 2.8E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_G189 d370c2cc11af4f9d2973155210cb4327 405 Gene3D G3DSA:1.20.1250.20 4 196 1.9E-8 T 14-10-2018 MC28_G189 d370c2cc11af4f9d2973155210cb4327 405 Gene3D G3DSA:1.20.1250.20 208 394 2.6E-6 T 14-10-2018 MC28_G189 d370c2cc11af4f9d2973155210cb4327 405 Pfam PF07690 Major Facilitator Superfamily 9 325 1.6E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_G189 d370c2cc11af4f9d2973155210cb4327 405 SUPERFAMILY SSF103473 5 391 5.06E-19 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1756 e08d846e48413959d081d9312b7e8381 245 Gene3D G3DSA:3.40.50.1580 2 242 9.1E-44 T 14-10-2018 MC28_1756 e08d846e48413959d081d9312b7e8381 245 SUPERFAMILY SSF53167 10 235 6.28E-49 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 MC28_1756 e08d846e48413959d081d9312b7e8381 245 Pfam PF01048 Phosphorylase superfamily 12 234 2.2E-37 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 MC28_1756 e08d846e48413959d081d9312b7e8381 245 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 12 222 2.6E-22 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_D022 7eecf80e8ca2e42e17ebe3f997247705 104 ProDom PD286107 PLASMID MEMBRANE PXO2-11/BXB0010/GBAA_PXO2_0010 TRANSMEMBRANE 3 93 2.0E-47 T 14-10-2018 IPR020275 Uncharacterised protein family, plasmid pXO2-11 MC28_D022 7eecf80e8ca2e42e17ebe3f997247705 104 Pfam PF17332 Uncharacterized protein pXO2-11 7 93 1.9E-9 T 14-10-2018 IPR020275 Uncharacterised protein family, plasmid pXO2-11 MC28_1296 703e1af8be180f60cee14b2a62a96332 466 Gene3D G3DSA:1.10.10.10 1 86 3.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1296 703e1af8be180f60cee14b2a62a96332 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 1.4E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1296 703e1af8be180f60cee14b2a62a96332 466 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.4E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1296 703e1af8be180f60cee14b2a62a96332 466 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.4E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1296 703e1af8be180f60cee14b2a62a96332 466 SUPERFAMILY SSF46785 10 85 3.51E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1296 703e1af8be180f60cee14b2a62a96332 466 Gene3D G3DSA:3.40.640.10 92 457 1.0E-116 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1296 703e1af8be180f60cee14b2a62a96332 466 SUPERFAMILY SSF53383 86 463 1.8E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_1296 703e1af8be180f60cee14b2a62a96332 466 Pfam PF00155 Aminotransferase class I and II 119 414 3.7E-12 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_1296 703e1af8be180f60cee14b2a62a96332 466 SMART SM00345 19 78 1.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0644 e9aabce7cb703d497c19ab920d0c5b1a 194 SUPERFAMILY SSF54211 88 179 4.25E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_0644 e9aabce7cb703d497c19ab920d0c5b1a 194 Gene3D G3DSA:3.30.230.40 1 89 3.7E-33 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 MC28_0644 e9aabce7cb703d497c19ab920d0c5b1a 194 SUPERFAMILY SSF54211 3 85 2.28E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_0644 e9aabce7cb703d497c19ab920d0c5b1a 194 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 1.6E-63 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 MC28_0644 e9aabce7cb703d497c19ab920d0c5b1a 194 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 MC28_0644 e9aabce7cb703d497c19ab920d0c5b1a 194 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 MC28_0644 e9aabce7cb703d497c19ab920d0c5b1a 194 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 194 40.231 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 MC28_0644 e9aabce7cb703d497c19ab920d0c5b1a 194 Gene3D G3DSA:3.30.230.40 90 194 5.9E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 MC28_4323 affc68bf0849ca122938dfe5f8fbd474 476 Pfam PF01235 Sodium:alanine symporter family 56 450 6.7E-159 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4323 affc68bf0849ca122938dfe5f8fbd474 476 PRINTS PR00175 Sodium/alanine symporter signature 211 230 5.2E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4323 affc68bf0849ca122938dfe5f8fbd474 476 PRINTS PR00175 Sodium/alanine symporter signature 302 320 5.2E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4323 affc68bf0849ca122938dfe5f8fbd474 476 PRINTS PR00175 Sodium/alanine symporter signature 407 427 5.2E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4323 affc68bf0849ca122938dfe5f8fbd474 476 PRINTS PR00175 Sodium/alanine symporter signature 93 115 5.2E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4323 affc68bf0849ca122938dfe5f8fbd474 476 PRINTS PR00175 Sodium/alanine symporter signature 183 201 5.2E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4323 affc68bf0849ca122938dfe5f8fbd474 476 PRINTS PR00175 Sodium/alanine symporter signature 347 369 5.2E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4323 affc68bf0849ca122938dfe5f8fbd474 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 438 3.0E-157 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4323 affc68bf0849ca122938dfe5f8fbd474 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 SUPERFAMILY SSF69360 199 337 6.17E-56 T 14-10-2018 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Gene3D G3DSA:2.10.270.10 338 401 1.2E-21 T 14-10-2018 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Gene3D G3DSA:2.10.270.10 112 177 1.9E-20 T 14-10-2018 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Gene3D G3DSA:2.10.270.10 178 235 1.9E-23 T 14-10-2018 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Gene3D G3DSA:2.10.270.10 29 111 1.0E-15 T 14-10-2018 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Gene3D G3DSA:2.10.270.10 236 280 4.5E-18 T 14-10-2018 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 279 297 1.8E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 361 377 9.2E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 159 177 1.8E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 261 277 9.2E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 77 94 1.3E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 339 357 1.8E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 239 257 1.8E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 319 337 1.8E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 57 72 0.061 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 299 317 1.8E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 221 237 9.2E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 199 217 1.8E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 139 157 7.4E-7 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 179 197 1.8E-6 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Pfam PF01473 Putative cell wall binding repeat 379 396 3.8E-5 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 SUPERFAMILY SSF69360 113 239 1.09E-45 T 14-10-2018 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 SUPERFAMILY SSF69360 55 112 5.89E-15 T 14-10-2018 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 Gene3D G3DSA:2.10.270.10 281 337 4.2E-22 T 14-10-2018 MC28_3838 67a16c41cb6806ecff36bec3d636cb4a 403 SUPERFAMILY SSF69360 320 399 6.67E-28 T 14-10-2018 MC28_G243 83a7f162570e445c0eac690b9606d6fd 482 SUPERFAMILY SSF52490 6 266 4.45E-20 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 MC28_G243 83a7f162570e445c0eac690b9606d6fd 482 Gene3D G3DSA:3.40.50.1440 12 150 1.3E-25 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 MC28_G243 83a7f162570e445c0eac690b9606d6fd 482 Gene3D G3DSA:3.40.50.1440 164 428 3.3E-22 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 MC28_G243 83a7f162570e445c0eac690b9606d6fd 482 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 130 7.9E-8 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 MC28_2756 b459595be1b23469e457b99be73392ec 430 Gene3D G3DSA:3.20.20.80 132 419 2.6E-119 T 14-10-2018 MC28_2756 b459595be1b23469e457b99be73392ec 430 Gene3D G3DSA:3.10.350.10 52 104 1.0E-14 T 14-10-2018 IPR036779 LysM domain superfamily MC28_2756 b459595be1b23469e457b99be73392ec 430 Gene3D G3DSA:3.10.350.10 2 51 9.0E-11 T 14-10-2018 IPR036779 LysM domain superfamily MC28_2756 b459595be1b23469e457b99be73392ec 430 SMART SM00257 53 97 9.1E-11 T 14-10-2018 IPR018392 LysM domain MC28_2756 b459595be1b23469e457b99be73392ec 430 SMART SM00257 4 48 4.8E-8 T 14-10-2018 IPR018392 LysM domain MC28_2756 b459595be1b23469e457b99be73392ec 430 Gene3D G3DSA:3.10.50.10 324 383 2.6E-119 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily MC28_2756 b459595be1b23469e457b99be73392ec 430 SMART SM00636 104 412 1.6E-27 T 14-10-2018 IPR011583 Chitinase II GO:0008061 MC28_2756 b459595be1b23469e457b99be73392ec 430 Pfam PF00704 Glycosyl hydrolases family 18 176 410 1.9E-23 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 MC28_2756 b459595be1b23469e457b99be73392ec 430 SUPERFAMILY SSF54106 4 48 2.62E-7 T 14-10-2018 MC28_2756 b459595be1b23469e457b99be73392ec 430 SUPERFAMILY SSF54106 54 97 2.35E-10 T 14-10-2018 MC28_2756 b459595be1b23469e457b99be73392ec 430 Pfam PF01476 LysM domain 54 97 2.4E-10 T 14-10-2018 IPR018392 LysM domain MC28_2756 b459595be1b23469e457b99be73392ec 430 Pfam PF01476 LysM domain 5 47 1.4E-8 T 14-10-2018 IPR018392 LysM domain MC28_2756 b459595be1b23469e457b99be73392ec 430 SUPERFAMILY SSF51445 130 427 5.04E-46 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_0324 663822d1dfdded39213ecde2c85277f5 329 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 323 6.7E-129 T 14-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 MC28_0324 663822d1dfdded39213ecde2c85277f5 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 47 151 8.5E-11 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 MC28_0324 663822d1dfdded39213ecde2c85277f5 329 Gene3D G3DSA:3.30.930.10 3 242 2.8E-78 T 14-10-2018 MC28_0324 663822d1dfdded39213ecde2c85277f5 329 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 327 8.3E-30 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 MC28_0324 663822d1dfdded39213ecde2c85277f5 329 SUPERFAMILY SSF55681 2 241 9.94E-81 T 14-10-2018 MC28_0324 663822d1dfdded39213ecde2c85277f5 329 SUPERFAMILY SSF82649 243 329 5.02E-27 T 14-10-2018 MC28_0324 663822d1dfdded39213ecde2c85277f5 329 Gene3D G3DSA:3.30.390.50 243 329 9.1E-31 T 14-10-2018 MC28_E012 acdd360575e335904de83daf71180ddd 419 Pfam PF01548 Transposase 15 174 4.9E-34 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 MC28_E012 acdd360575e335904de83daf71180ddd 419 Pfam PF02371 Transposase IS116/IS110/IS902 family 290 374 9.9E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 MC28_D030 8ca82c04e194f28afb7cae481ce76c2d 91 Pfam PF17632 Family of unknown function (DUF5513) 1 91 1.3E-58 T 14-10-2018 IPR020265 Protein of unknown function DUF5513 MC28_D030 8ca82c04e194f28afb7cae481ce76c2d 91 ProDom PD280341 PLASMID PXO2-06/BXB0005/GBAA_PXO2_0005 1 91 3.0E-47 T 14-10-2018 IPR020265 Protein of unknown function DUF5513 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 Gene3D G3DSA:2.40.37.10 28 438 3.8E-156 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 45 399 7.8E-16 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 SUPERFAMILY SSF51419 41 310 6.69E-83 T 14-10-2018 IPR029066 PLP-binding barrel MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 Gene3D G3DSA:3.20.20.10 49 308 3.8E-156 T 14-10-2018 IPR029066 PLP-binding barrel MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 PRINTS PR01181 Diaminopimelate decarboxylase signature 92 109 4.9E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 PRINTS PR01181 Diaminopimelate decarboxylase signature 181 190 4.9E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 PRINTS PR01181 Diaminopimelate decarboxylase signature 327 345 4.9E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 PRINTS PR01181 Diaminopimelate decarboxylase signature 409 431 4.9E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 51 308 1.1E-66 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 SUPERFAMILY SSF50621 285 442 1.3E-50 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 30 442 39.714 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 21 440 8.1E-154 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 94 106 3.5E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 209 222 3.5E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 399 412 3.5E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 MC28_0656 ed793ab3e74b3ab3ab9401076fcf3a87 449 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 298 317 3.5E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 SMART SM00138 19 282 5.1E-39 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 Gene3D G3DSA:3.40.50.150 84 284 2.5E-57 T 14-10-2018 MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 SUPERFAMILY SSF53335 85 266 9.61E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 PRINTS PR00996 Glutamate methyltransferase family signature 78 90 6.8E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 PRINTS PR00996 Glutamate methyltransferase family signature 220 234 6.8E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 PRINTS PR00996 Glutamate methyltransferase family signature 146 162 6.8E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 6.8E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 PRINTS PR00996 Glutamate methyltransferase family signature 114 134 6.8E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 PRINTS PR00996 Glutamate methyltransferase family signature 239 262 6.8E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 Pfam PF01739 CheR methyltransferase, SAM binding domain 85 263 5.2E-41 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 Pfam PF03705 CheR methyltransferase, all-alpha domain 21 71 3.5E-12 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal MC28_0240 73335396ab9a3c425e2b2d2bf1cd7ad4 285 SUPERFAMILY SSF47757 15 87 4.45E-9 T 14-10-2018 MC28_2636 4da5a8919b9b96c109964e00cc7cdd25 263 Pfam PF00797 N-acetyltransferase 23 263 2.1E-43 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_2636 4da5a8919b9b96c109964e00cc7cdd25 263 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 1.1E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_2636 4da5a8919b9b96c109964e00cc7cdd25 263 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 1.1E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_2636 4da5a8919b9b96c109964e00cc7cdd25 263 PRINTS PR01543 Arylamine N-acetyltransferase signature 102 127 1.1E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_2636 4da5a8919b9b96c109964e00cc7cdd25 263 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 1.1E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_2636 4da5a8919b9b96c109964e00cc7cdd25 263 PRINTS PR01543 Arylamine N-acetyltransferase signature 256 263 1.1E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_2636 4da5a8919b9b96c109964e00cc7cdd25 263 SUPERFAMILY SSF54001 2 263 6.28E-66 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_2636 4da5a8919b9b96c109964e00cc7cdd25 263 Gene3D G3DSA:3.30.2140.20 1 263 4.2E-99 T 14-10-2018 MC28_3405 403410369cd02df27d6120ea1b26d1cd 153 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 12 147 2.4E-60 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3405 403410369cd02df27d6120ea1b26d1cd 153 SUPERFAMILY SSF52121 2 152 3.66E-64 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3405 403410369cd02df27d6120ea1b26d1cd 153 Gene3D G3DSA:3.40.50.960 1 153 7.4E-68 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3405 403410369cd02df27d6120ea1b26d1cd 153 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 7 152 31.583 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3405 403410369cd02df27d6120ea1b26d1cd 153 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 11 149 1.2E-60 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_B71 95227d1e09e38f24eaacfe11fa722e4e 425 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 29 410 4.1E-59 T 14-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 MC28_B71 95227d1e09e38f24eaacfe11fa722e4e 425 Gene3D G3DSA:3.30.420.280 237 419 2.1E-51 T 14-10-2018 MC28_B71 95227d1e09e38f24eaacfe11fa722e4e 425 Gene3D G3DSA:3.40.50.300 12 234 4.0E-58 T 14-10-2018 MC28_B71 95227d1e09e38f24eaacfe11fa722e4e 425 Pfam PF17288 Terminase RNAseH like domain 264 408 1.5E-11 T 14-10-2018 IPR035413 Phage terminase large subunit, C-terminal MC28_B71 95227d1e09e38f24eaacfe11fa722e4e 425 Pfam PF04466 Phage terminase large subunit 29 231 2.9E-51 T 14-10-2018 IPR035412 Phage terminase large subunit, N-terminal MC28_3255 ec9e606a103a5eb10bbf405be224e348 414 PIRSF PIRSF500217 1 414 7.0E-137 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 MC28_3255 ec9e606a103a5eb10bbf405be224e348 414 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 96 292 9.2E-26 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT MC28_3255 ec9e606a103a5eb10bbf405be224e348 414 PIRSF PIRSF016636 1 414 8.3E-132 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB MC28_4151 312d62f86dca5ea56ac2fe8a557b6a87 240 Gene3D G3DSA:3.40.50.1820 13 239 1.5E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4151 312d62f86dca5ea56ac2fe8a557b6a87 240 Pfam PF01764 Lipase (class 3) 66 196 5.5E-30 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 MC28_4151 312d62f86dca5ea56ac2fe8a557b6a87 240 SUPERFAMILY SSF53474 6 219 2.36E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 PRINTS PR00471 Acetate kinase family signature 280 293 2.1E-17 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 PRINTS PR00471 Acetate kinase family signature 11 22 2.1E-17 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 PRINTS PR00471 Acetate kinase family signature 185 206 2.1E-17 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 PRINTS PR00471 Acetate kinase family signature 303 319 2.1E-17 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 Gene3D G3DSA:3.30.420.40 143 338 5.4E-161 T 14-10-2018 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 PIRSF PIRSF036458 7 362 8.9E-180 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 SUPERFAMILY SSF53067 10 178 2.51E-74 T 14-10-2018 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 Pfam PF00871 Acetokinase family 11 353 6.5E-75 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 11 22 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 Gene3D G3DSA:3.30.420.40 10 361 5.4E-161 T 14-10-2018 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 Hamap MF_00542 Probable butyrate kinase [buk]. 1 372 173.274 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 SUPERFAMILY SSF53067 123 353 3.38E-56 T 14-10-2018 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 185 202 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 MC28_3455 d85ad3880ab0e9cf742cf033015556d2 372 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 10 359 3.3E-173 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 SMART SM00926 47 109 2.4E-7 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 9 44 1.7E-10 T 14-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 Gene3D G3DSA:3.40.50.12440 48 1228 0.0 T 14-10-2018 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 52 70 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 768 785 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 SUPERFAMILY SSF53706 11 1064 0.0 T 14-10-2018 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 Pfam PF01568 Molydopterin dinucleotide binding domain 1080 1193 3.7E-22 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 Pfam PF00384 Molybdopterin oxidoreductase 112 824 3.4E-174 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 7 1227 0.0 T 14-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 MC28_1340 95104c92d44e4ebdc7d337fbdb7b881c 1228 SUPERFAMILY SSF50692 1071 1226 3.16E-47 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily MC28_G004 d0da3f2e7159613ba5ff0628a5c90fcb 399 Pfam PF10117 McrBC 5-methylcytosine restriction system component 42 353 3.9E-62 T 14-10-2018 IPR019292 5-methylcytosine restriction system component MC28_2088 5e203da3b2cc86f6018ab0d22737ced3 132 Gene3D G3DSA:3.10.129.10 1 131 1.6E-32 T 14-10-2018 MC28_2088 5e203da3b2cc86f6018ab0d22737ced3 132 SUPERFAMILY SSF54637 3 125 7.15E-29 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_2088 5e203da3b2cc86f6018ab0d22737ced3 132 Pfam PF07977 FabA-like domain 7 123 2.6E-15 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 MC28_0133 f59402b78813eda14ee1fcf0c2aa4861 244 SUPERFAMILY SSF52540 1 239 4.06E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0133 f59402b78813eda14ee1fcf0c2aa4861 244 Gene3D G3DSA:3.40.50.300 1 243 5.5E-80 T 14-10-2018 MC28_0133 f59402b78813eda14ee1fcf0c2aa4861 244 PIRSF PIRSF039085 1 244 8.7E-117 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 MC28_0133 f59402b78813eda14ee1fcf0c2aa4861 244 Pfam PF00005 ABC transporter 17 169 1.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0133 f59402b78813eda14ee1fcf0c2aa4861 244 SMART SM00382 26 217 1.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0133 f59402b78813eda14ee1fcf0c2aa4861 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0099 c2507d210854a0dbcfb05b927fa833b2 454 Pfam PF02378 Phosphotransferase system, EIIC 120 389 2.7E-34 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_0099 c2507d210854a0dbcfb05b927fa833b2 454 Gene3D G3DSA:3.30.1360.60 1 78 2.3E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_0099 c2507d210854a0dbcfb05b927fa833b2 454 Pfam PF00367 phosphotransferase system, EIIB 9 42 3.2E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_0099 c2507d210854a0dbcfb05b927fa833b2 454 SUPERFAMILY SSF55604 7 80 1.09E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_0099 c2507d210854a0dbcfb05b927fa833b2 454 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_3964 76d19e2d2d8d192a62f789e955cab1e9 182 Gene3D G3DSA:3.40.630.30 2 176 1.9E-46 T 14-10-2018 MC28_3964 76d19e2d2d8d192a62f789e955cab1e9 182 SUPERFAMILY SSF55729 6 174 1.4E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3964 76d19e2d2d8d192a62f789e955cab1e9 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 3.6E-23 T 14-10-2018 IPR000182 GNAT domain MC28_4248 9101daf86e8f848027d9f71f67e0ac6d 268 SUPERFAMILY SSF53850 27 266 3.63E-80 T 14-10-2018 MC28_4248 9101daf86e8f848027d9f71f67e0ac6d 268 Gene3D G3DSA:3.40.190.10 30 263 4.7E-97 T 14-10-2018 MC28_4248 9101daf86e8f848027d9f71f67e0ac6d 268 Pfam PF03180 NLPA lipoprotein 28 266 1.1E-88 T 14-10-2018 IPR004872 Lipoprotein NlpA family MC28_4248 9101daf86e8f848027d9f71f67e0ac6d 268 PIRSF PIRSF002854 1 267 2.8E-99 T 14-10-2018 IPR004872 Lipoprotein NlpA family MC28_4248 9101daf86e8f848027d9f71f67e0ac6d 268 Gene3D G3DSA:3.40.190.10 109 217 4.7E-97 T 14-10-2018 MC28_2748 afc44ce31d7986b5490fe62afadf7e28 137 Pfam PF13380 CoA binding domain 19 133 2.4E-38 T 14-10-2018 IPR003781 CoA-binding GO:0048037 MC28_2748 afc44ce31d7986b5490fe62afadf7e28 137 Gene3D G3DSA:3.40.50.720 1 137 2.2E-39 T 14-10-2018 MC28_2748 afc44ce31d7986b5490fe62afadf7e28 137 SMART SM00881 15 107 1.2E-19 T 14-10-2018 IPR003781 CoA-binding GO:0048037 MC28_2748 afc44ce31d7986b5490fe62afadf7e28 137 SUPERFAMILY SSF51735 9 136 4.38E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0380 d26475da43cb46a2e8ac38e607832b6e 111 Pfam PF05593 RHS Repeat 34 64 3.8E-7 T 14-10-2018 IPR031325 RHS repeat MC28_0380 d26475da43cb46a2e8ac38e607832b6e 111 Gene3D G3DSA:2.180.10.10 3 105 9.2E-7 T 14-10-2018 MC28_0380 d26475da43cb46a2e8ac38e607832b6e 111 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 34 69 5.7E-8 T 14-10-2018 IPR006530 YD repeat MC28_2041 f46d1e3a3635ea735dcbb1abccba6959 152 Pfam PF04977 Septum formation initiator 75 151 1.0E-15 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC MC28_F058 b00ab9cc1880e5578d03e35801a91e3a 282 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 76 85 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site MC28_F058 b00ab9cc1880e5578d03e35801a91e3a 282 Pfam PF01226 Formate/nitrite transporter 10 251 1.8E-66 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 MC28_F058 b00ab9cc1880e5578d03e35801a91e3a 282 Gene3D G3DSA:1.20.1080.10 2 259 5.8E-82 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_F058 b00ab9cc1880e5578d03e35801a91e3a 282 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 160 170 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site MC28_1328 e28a9e9fb0831e93e6b4c07bfe88d9f7 329 Pfam PF00107 Zinc-binding dehydrogenase 151 279 1.1E-31 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MC28_1328 e28a9e9fb0831e93e6b4c07bfe88d9f7 329 Gene3D G3DSA:3.90.180.10 11 319 1.5E-100 T 14-10-2018 MC28_1328 e28a9e9fb0831e93e6b4c07bfe88d9f7 329 SUPERFAMILY SSF50129 1 149 4.57E-39 T 14-10-2018 IPR011032 GroES-like superfamily MC28_1328 e28a9e9fb0831e93e6b4c07bfe88d9f7 329 Gene3D G3DSA:3.40.50.720 123 268 1.5E-100 T 14-10-2018 MC28_1328 e28a9e9fb0831e93e6b4c07bfe88d9f7 329 SUPERFAMILY SSF51735 112 272 2.7E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1328 e28a9e9fb0831e93e6b4c07bfe88d9f7 329 SMART SM00829 11 323 2.3E-58 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_1328 e28a9e9fb0831e93e6b4c07bfe88d9f7 329 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 MC28_1328 e28a9e9fb0831e93e6b4c07bfe88d9f7 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 1.6E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 SUPERFAMILY SSF46906 67 140 3.79E-27 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 2.5E-31 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 Gene3D G3DSA:1.10.10.250 72 140 2.9E-29 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 SUPERFAMILY SSF54747 3 72 1.83E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.8E-65 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.9E-25 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 Gene3D G3DSA:3.30.1550.10 2 71 3.3E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 SMART SM00649 9 140 2.3E-87 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 3.0E-16 T 14-10-2018 MC28_4809 3c6bbedfc44a957c95a670e0f61b8a91 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.612 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 MC28_5347 6c98cdc41f96f80f11c8ae4f4a040915 140 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_5347 6c98cdc41f96f80f11c8ae4f4a040915 140 SUPERFAMILY SSF55811 2 109 4.2E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_5347 6c98cdc41f96f80f11c8ae4f4a040915 140 PRINTS PR00502 NUDIX hydrolase family signature 30 44 3.9E-10 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_5347 6c98cdc41f96f80f11c8ae4f4a040915 140 PRINTS PR00502 NUDIX hydrolase family signature 44 59 3.9E-10 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_5347 6c98cdc41f96f80f11c8ae4f4a040915 140 Pfam PF00293 NUDIX domain 5 112 1.7E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_5347 6c98cdc41f96f80f11c8ae4f4a040915 140 Gene3D G3DSA:3.90.79.10 2 121 3.8E-28 T 14-10-2018 MC28_1443 f34a1922f1c0c0b336eb898b26f4fa8c 439 PIRSF PIRSF036794 19 439 2.4E-159 T 14-10-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type MC28_1443 f34a1922f1c0c0b336eb898b26f4fa8c 439 Pfam PF05139 Erythromycin esterase 98 431 5.5E-68 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 MC28_1443 f34a1922f1c0c0b336eb898b26f4fa8c 439 Gene3D G3DSA:3.40.1660.10 41 432 2.8E-152 T 14-10-2018 MC28_1443 f34a1922f1c0c0b336eb898b26f4fa8c 439 Gene3D G3DSA:1.20.1440.30 172 298 2.8E-152 T 14-10-2018 MC28_1443 f34a1922f1c0c0b336eb898b26f4fa8c 439 SUPERFAMILY SSF159501 37 437 1.96E-116 T 14-10-2018 MC28_1443 f34a1922f1c0c0b336eb898b26f4fa8c 439 Gene3D G3DSA:3.30.1870.10 100 171 2.8E-152 T 14-10-2018 MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 SMART SM00267 474 645 1.1E-63 T 14-10-2018 IPR000160 GGDEF domain MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 Pfam PF00563 EAL domain 661 896 1.1E-68 T 14-10-2018 IPR001633 EAL domain MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 483 644 8.7E-39 T 14-10-2018 IPR000160 GGDEF domain MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 Gene3D G3DSA:3.30.450.20 330 483 7.2E-17 T 14-10-2018 MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 SMART SM00052 655 901 4.1E-110 T 14-10-2018 IPR001633 EAL domain MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 SUPERFAMILY SSF141868 660 908 2.75E-86 T 14-10-2018 IPR035919 EAL domain superfamily MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 SUPERFAMILY SSF55785 354 472 1.64E-12 T 14-10-2018 IPR035965 PAS domain superfamily MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 Gene3D G3DSA:3.30.70.270 484 658 3.5E-55 T 14-10-2018 MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 Pfam PF00990 Diguanylate cyclase, GGDEF domain 485 640 2.3E-47 T 14-10-2018 IPR000160 GGDEF domain MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 SUPERFAMILY SSF55073 491 647 4.71E-48 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 Pfam PF13426 PAS domain 371 472 1.8E-8 T 14-10-2018 IPR000014 PAS domain MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 359 480 8.4E-13 T 14-10-2018 IPR000014 PAS domain MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 Gene3D G3DSA:3.20.20.450 659 908 8.1E-95 T 14-10-2018 IPR035919 EAL domain superfamily MC28_2667 27ae2c103adca9a7c6f243e0ee4f9c9f 912 SMART SM00091 361 427 5.1E-7 T 14-10-2018 IPR000014 PAS domain MC28_5345 dcf8f309f0095139ce5985aae6598180 401 SUPERFAMILY SSF53383 13 399 2.45E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_5345 dcf8f309f0095139ce5985aae6598180 401 Gene3D G3DSA:3.90.1150.10 43 390 3.1E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_5345 dcf8f309f0095139ce5985aae6598180 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 246 255 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 MC28_5345 dcf8f309f0095139ce5985aae6598180 401 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 15 401 7.5E-191 T 14-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type MC28_5345 dcf8f309f0095139ce5985aae6598180 401 Pfam PF00155 Aminotransferase class I and II 48 388 7.1E-62 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_5345 dcf8f309f0095139ce5985aae6598180 401 Gene3D G3DSA:3.40.640.10 63 299 3.1E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1442 0eee2214b416f83415ba7fac97ca232c 385 Gene3D G3DSA:3.40.710.10 47 385 8.7E-134 T 14-10-2018 MC28_1442 0eee2214b416f83415ba7fac97ca232c 385 Pfam PF00144 Beta-lactamase 62 382 1.1E-66 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_1442 0eee2214b416f83415ba7fac97ca232c 385 SUPERFAMILY SSF56601 62 376 1.88E-78 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1259 6345244e3652284a4434d5d495c7f085 459 PIRSF PIRSF038958 1 458 1.2E-106 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type MC28_1259 6345244e3652284a4434d5d495c7f085 459 Pfam PF01943 Polysaccharide biosynthesis protein 7 319 2.0E-41 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 MC28_1259 6345244e3652284a4434d5d495c7f085 459 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 375 455 2.7E-18 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain MC28_0927 b4bc25d64a149a2519b26ab8d9b5856e 405 SUPERFAMILY SSF48452 189 396 6.12E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0927 b4bc25d64a149a2519b26ab8d9b5856e 405 Pfam PF12844 Helix-turn-helix domain 6 67 5.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0927 b4bc25d64a149a2519b26ab8d9b5856e 405 Gene3D G3DSA:1.25.40.10 2 278 8.3E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0927 b4bc25d64a149a2519b26ab8d9b5856e 405 Gene3D G3DSA:1.25.40.10 309 404 3.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0927 b4bc25d64a149a2519b26ab8d9b5856e 405 SUPERFAMILY SSF47413 1 68 1.44E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_0927 b4bc25d64a149a2519b26ab8d9b5856e 405 SMART SM00530 8 62 7.3E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0927 b4bc25d64a149a2519b26ab8d9b5856e 405 SMART SM00028 190 223 98.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0927 b4bc25d64a149a2519b26ab8d9b5856e 405 SMART SM00028 353 386 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0927 b4bc25d64a149a2519b26ab8d9b5856e 405 SMART SM00028 311 344 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_1048 54db3e5b44bf2e2941e8d127dddc38ec 211 SUPERFAMILY SSF53335 1 203 8.37E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1048 54db3e5b44bf2e2941e8d127dddc38ec 211 Gene3D G3DSA:3.40.50.150 1 204 2.5E-24 T 14-10-2018 MC28_1048 54db3e5b44bf2e2941e8d127dddc38ec 211 Pfam PF08241 Methyltransferase domain 3 90 1.3E-14 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_1936 1bbb93693decfdbadf843d9d64851b7e 459 SUPERFAMILY SSF46785 2 64 6.99E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1936 1bbb93693decfdbadf843d9d64851b7e 459 Pfam PF00155 Aminotransferase class I and II 127 450 9.5E-32 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_1936 1bbb93693decfdbadf843d9d64851b7e 459 Gene3D G3DSA:3.90.1150.10 91 451 5.8E-97 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_1936 1bbb93693decfdbadf843d9d64851b7e 459 SMART SM00345 2 58 1.7E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1936 1bbb93693decfdbadf843d9d64851b7e 459 Gene3D G3DSA:1.10.10.10 1 58 3.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1936 1bbb93693decfdbadf843d9d64851b7e 459 Gene3D G3DSA:3.40.640.10 129 349 5.8E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1936 1bbb93693decfdbadf843d9d64851b7e 459 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 58 1.3E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1936 1bbb93693decfdbadf843d9d64851b7e 459 SUPERFAMILY SSF53383 54 456 2.34E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0348 158f34243211f68d5fa8504841976573 425 ProSitePatterns PS00161 Isocitrate lyase signature. 184 189 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 MC28_0348 158f34243211f68d5fa8504841976573 425 PIRSF PIRSF001362 1 425 6.9E-241 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 MC28_0348 158f34243211f68d5fa8504841976573 425 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 7 248 5.8E-108 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 MC28_0348 158f34243211f68d5fa8504841976573 425 Pfam PF00463 Isocitrate lyase family 11 247 1.5E-56 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 MC28_0348 158f34243211f68d5fa8504841976573 425 Pfam PF00463 Isocitrate lyase family 248 423 3.1E-48 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 MC28_0348 158f34243211f68d5fa8504841976573 425 SUPERFAMILY SSF51621 7 423 5.83E-157 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 MC28_0348 158f34243211f68d5fa8504841976573 425 Gene3D G3DSA:3.20.20.60 4 406 1.7E-172 T 14-10-2018 MC28_3078 10087612592bcc532a5e413814f31411 682 Gene3D G3DSA:2.40.50.140 46 139 4.0E-9 T 14-10-2018 MC28_3078 10087612592bcc532a5e413814f31411 682 SMART SM00490 323 401 1.1 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_3078 10087612592bcc532a5e413814f31411 682 SMART SM00490 488 573 5.0E-22 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_3078 10087612592bcc532a5e413814f31411 682 SUPERFAMILY SSF52540 376 585 7.1E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3078 10087612592bcc532a5e413814f31411 682 SUPERFAMILY SSF50249 6 168 1.88E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3078 10087612592bcc532a5e413814f31411 682 SUPERFAMILY SSF52540 173 436 4.82E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3078 10087612592bcc532a5e413814f31411 682 SMART SM00487 253 442 7.4E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_3078 10087612592bcc532a5e413814f31411 682 Pfam PF17191 RecG wedge domain 12 164 3.6E-14 T 14-10-2018 IPR033454 RecG, wedge domain MC28_3078 10087612592bcc532a5e413814f31411 682 Pfam PF00270 DEAD/DEAH box helicase 260 415 4.2E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MC28_3078 10087612592bcc532a5e413814f31411 682 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 26 648 3.6E-246 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 MC28_3078 10087612592bcc532a5e413814f31411 682 Gene3D G3DSA:3.40.50.300 198 434 4.3E-87 T 14-10-2018 MC28_3078 10087612592bcc532a5e413814f31411 682 Pfam PF00271 Helicase conserved C-terminal domain 455 572 5.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_3078 10087612592bcc532a5e413814f31411 682 Gene3D G3DSA:3.40.50.300 441 613 6.3E-57 T 14-10-2018 MC28_2898 0957fd10b4ae38d7e281ea48f9ce3103 356 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 322 334 3.7E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_2898 0957fd10b4ae38d7e281ea48f9ce3103 356 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 292 306 3.7E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_2898 0957fd10b4ae38d7e281ea48f9ce3103 356 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 306 322 3.7E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_2898 0957fd10b4ae38d7e281ea48f9ce3103 356 SMART SM00421 289 346 1.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_2898 0957fd10b4ae38d7e281ea48f9ce3103 356 SUPERFAMILY SSF46894 279 346 2.79E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_2898 0957fd10b4ae38d7e281ea48f9ce3103 356 Gene3D G3DSA:1.10.10.10 291 348 9.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2898 0957fd10b4ae38d7e281ea48f9ce3103 356 Pfam PF00196 Bacterial regulatory proteins, luxR family 291 343 8.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_3700 1f53b9985d10f231f815b1d2a73830ce 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 37.471 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 MC28_3700 1f53b9985d10f231f815b1d2a73830ce 170 Gene3D G3DSA:3.40.50.2020 1 169 8.1E-59 T 14-10-2018 MC28_3700 1f53b9985d10f231f815b1d2a73830ce 170 SUPERFAMILY SSF53271 3 163 1.7E-48 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_3700 1f53b9985d10f231f815b1d2a73830ce 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 4 167 1.6E-67 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 MC28_3700 1f53b9985d10f231f815b1d2a73830ce 170 Pfam PF00156 Phosphoribosyl transferase domain 31 148 6.1E-15 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 MC28_3755 7df802527003ba1843addad9da9dbbfb 250 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 243 9.1E-61 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3755 7df802527003ba1843addad9da9dbbfb 250 SUPERFAMILY SSF69618 6 247 4.58E-60 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3755 7df802527003ba1843addad9da9dbbfb 250 Gene3D G3DSA:3.40.50.10090 3 125 3.0E-23 T 14-10-2018 MC28_3755 7df802527003ba1843addad9da9dbbfb 250 Gene3D G3DSA:3.40.50.10090 146 249 1.3E-21 T 14-10-2018 MC28_3142 6374d4225e3b8fb3634751d91730850d 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 4 293 1.2E-72 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 MC28_3142 6374d4225e3b8fb3634751d91730850d 296 SUPERFAMILY SSF48179 174 293 1.16E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_3142 6374d4225e3b8fb3634751d91730850d 296 Gene3D G3DSA:3.40.50.720 1 173 6.6E-44 T 14-10-2018 MC28_3142 6374d4225e3b8fb3634751d91730850d 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 148 5.8E-31 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain MC28_3142 6374d4225e3b8fb3634751d91730850d 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 175 293 4.7E-31 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain MC28_3142 6374d4225e3b8fb3634751d91730850d 296 Gene3D G3DSA:1.10.1040.10 174 296 4.4E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_3142 6374d4225e3b8fb3634751d91730850d 296 SUPERFAMILY SSF51735 3 163 1.09E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4971 8ede1c337c71c3d2d21eb8a8fbb8a35b 239 Gene3D G3DSA:3.40.50.2300 6 136 1.3E-37 T 14-10-2018 MC28_4971 8ede1c337c71c3d2d21eb8a8fbb8a35b 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 235 6.6E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4971 8ede1c337c71c3d2d21eb8a8fbb8a35b 239 SMART SM00448 10 120 5.0E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4971 8ede1c337c71c3d2d21eb8a8fbb8a35b 239 SMART SM00862 159 235 2.7E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4971 8ede1c337c71c3d2d21eb8a8fbb8a35b 239 SUPERFAMILY SSF52172 9 194 3.32E-41 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4971 8ede1c337c71c3d2d21eb8a8fbb8a35b 239 Gene3D G3DSA:1.10.10.10 137 239 1.7E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4971 8ede1c337c71c3d2d21eb8a8fbb8a35b 239 Pfam PF00072 Response regulator receiver domain 12 121 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3065 f5e363f4d2747dd9d4078f894c4239bd 171 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 170 1.5E-54 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 MC28_3065 f5e363f4d2747dd9d4078f894c4239bd 171 SUPERFAMILY SSF50346 100 170 1.82E-21 T 14-10-2018 IPR011033 PRC-barrel-like superfamily MC28_3065 f5e363f4d2747dd9d4078f894c4239bd 171 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 170 25.163 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 MC28_3065 f5e363f4d2747dd9d4078f894c4239bd 171 Pfam PF01782 RimM N-terminal domain 7 91 8.8E-24 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 MC28_3065 f5e363f4d2747dd9d4078f894c4239bd 171 SUPERFAMILY SSF50447 3 92 1.94E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_3065 f5e363f4d2747dd9d4078f894c4239bd 171 Gene3D G3DSA:2.30.30.240 95 171 1.0E-21 T 14-10-2018 MC28_3065 f5e363f4d2747dd9d4078f894c4239bd 171 Pfam PF05239 PRC-barrel domain 97 170 1.1E-14 T 14-10-2018 IPR027275 PRC-barrel domain MC28_3065 f5e363f4d2747dd9d4078f894c4239bd 171 Gene3D G3DSA:2.40.30.60 5 93 9.5E-22 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 MC28_4521 ce6e67bc17c545752801ac83953c6fe1 280 SUPERFAMILY SSF52540 4 226 2.71E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4521 ce6e67bc17c545752801ac83953c6fe1 280 SMART SM00382 29 216 3.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4521 ce6e67bc17c545752801ac83953c6fe1 280 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4521 ce6e67bc17c545752801ac83953c6fe1 280 Pfam PF00005 ABC transporter 20 160 3.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4521 ce6e67bc17c545752801ac83953c6fe1 280 Gene3D G3DSA:3.40.50.300 2 241 3.7E-65 T 14-10-2018 MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 Gene3D G3DSA:1.10.10.10 1 85 1.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 SUPERFAMILY SSF53850 89 290 2.05E-34 T 14-10-2018 MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 SUPERFAMILY SSF46785 1 86 2.03E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 Gene3D G3DSA:3.40.190.10 88 285 4.5E-65 T 14-10-2018 MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 Pfam PF03466 LysR substrate binding domain 87 291 8.9E-41 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2813 beb4c3ee6dd3fa484def48a55c8add04 299 Gene3D G3DSA:3.40.190.10 162 267 4.5E-65 T 14-10-2018 MC28_3286 201fdcedc3d7f307e82c34c370013f7d 220 SUPERFAMILY SSF140423 21 211 7.06E-58 T 14-10-2018 IPR036785 YkyA-like superfamily MC28_3286 201fdcedc3d7f307e82c34c370013f7d 220 Gene3D G3DSA:1.20.120.570 13 209 1.1E-40 T 14-10-2018 IPR036785 YkyA-like superfamily MC28_3286 201fdcedc3d7f307e82c34c370013f7d 220 Pfam PF10368 Putative cell-wall binding lipoprotein 13 213 1.0E-63 T 14-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like MC28_2456 50580c453fc9caabb185beb333bec115 158 Pfam PF04073 Aminoacyl-tRNA editing domain 36 147 5.5E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 MC28_2456 50580c453fc9caabb185beb333bec115 158 Gene3D G3DSA:3.90.960.10 1 158 3.2E-50 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 MC28_2456 50580c453fc9caabb185beb333bec115 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 157 5.7E-63 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC MC28_2456 50580c453fc9caabb185beb333bec115 158 PIRSF PIRSF006181 1 158 3.9E-62 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC MC28_2456 50580c453fc9caabb185beb333bec115 158 SUPERFAMILY SSF55826 6 157 4.45E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 MC28_4302 0d12bb168907057025cb3dccdb9cadd8 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 514 6.8E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4302 0d12bb168907057025cb3dccdb9cadd8 564 Gene3D G3DSA:1.20.1480.50 166 259 2.0E-11 T 14-10-2018 MC28_4302 0d12bb168907057025cb3dccdb9cadd8 564 SMART SM00304 203 257 2.5E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4302 0d12bb168907057025cb3dccdb9cadd8 564 Pfam PF00672 HAMP domain 205 254 1.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4302 0d12bb168907057025cb3dccdb9cadd8 564 SUPERFAMILY SSF58104 225 561 1.1E-74 T 14-10-2018 MC28_4302 0d12bb168907057025cb3dccdb9cadd8 564 SMART SM00283 286 561 2.4E-78 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4302 0d12bb168907057025cb3dccdb9cadd8 564 Gene3D G3DSA:1.10.287.950 260 561 5.4E-66 T 14-10-2018 MC28_4111 7e162278464c47065a6511abf3b133e2 336 Pfam PF00248 Aldo/keto reductase family 9 321 9.0E-56 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_4111 7e162278464c47065a6511abf3b133e2 336 SUPERFAMILY SSF51430 8 321 1.57E-64 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_4111 7e162278464c47065a6511abf3b133e2 336 Gene3D G3DSA:3.20.20.100 2 323 1.2E-66 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_3403 227f242ee8d62997e216d34c61a5bb9a 214 Gene3D G3DSA:2.40.30.20 101 202 1.6E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_3403 227f242ee8d62997e216d34c61a5bb9a 214 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 4.2E-78 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3403 227f242ee8d62997e216d34c61a5bb9a 214 SUPERFAMILY SSF63380 92 196 6.8E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel MC28_3403 227f242ee8d62997e216d34c61a5bb9a 214 PIRSF PIRSF000498 1 209 3.4E-76 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3403 227f242ee8d62997e216d34c61a5bb9a 214 Pfam PF00677 Lumazine binding domain 99 183 2.1E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3403 227f242ee8d62997e216d34c61a5bb9a 214 Pfam PF00677 Lumazine binding domain 3 86 4.3E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 MC28_3403 227f242ee8d62997e216d34c61a5bb9a 214 Gene3D G3DSA:2.40.30.20 1 88 7.8E-32 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 MC28_3403 227f242ee8d62997e216d34c61a5bb9a 214 SUPERFAMILY SSF63380 1 89 5.19E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel MC28_2623 fc131380335665420841a62a079162a7 322 SUPERFAMILY SSF81345 3 317 3.53E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_2623 fc131380335665420841a62a079162a7 322 Pfam PF01032 FecCD transport family 8 317 2.5E-89 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_2623 fc131380335665420841a62a079162a7 322 Gene3D G3DSA:1.10.3470.10 1 320 3.3E-90 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_1601 8def5a229912b4aaac664189f23f925e 317 Gene3D G3DSA:3.90.245.10 6 317 1.0E-110 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_1601 8def5a229912b4aaac664189f23f925e 317 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 7 306 7.5E-45 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain MC28_1601 8def5a229912b4aaac664189f23f925e 317 SUPERFAMILY SSF53590 5 313 6.54E-82 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_2252 5b23f90f9eff00337e53c1214bd42db6 488 PIRSF PIRSF006060 2 481 4.7E-85 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_2252 5b23f90f9eff00337e53c1214bd42db6 488 ProSitePatterns PS00218 Amino acid permeases signature. 54 85 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 MC28_2252 5b23f90f9eff00337e53c1214bd42db6 488 Pfam PF00324 Amino acid permease 29 478 2.6E-135 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_2252 5b23f90f9eff00337e53c1214bd42db6 488 Gene3D G3DSA:1.20.1740.10 20 483 9.0E-61 T 14-10-2018 MC28_5323 ad6b9b6cd9bddbbc5eca274ed4ca32c8 487 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 155 336 7.7E-12 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 MC28_5323 ad6b9b6cd9bddbbc5eca274ed4ca32c8 487 SUPERFAMILY SSF54675 5 138 3.34E-47 T 14-10-2018 MC28_5323 ad6b9b6cd9bddbbc5eca274ed4ca32c8 487 Gene3D G3DSA:3.20.140.10 11 470 1.2E-204 T 14-10-2018 MC28_5323 ad6b9b6cd9bddbbc5eca274ed4ca32c8 487 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 10 465 2.5E-178 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 MC28_5323 ad6b9b6cd9bddbbc5eca274ed4ca32c8 487 SUPERFAMILY SSF51690 139 478 5.0E-132 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 MC28_5323 ad6b9b6cd9bddbbc5eca274ed4ca32c8 487 PIRSF PIRSF000484 3 480 3.4E-156 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 MC28_5323 ad6b9b6cd9bddbbc5eca274ed4ca32c8 487 Gene3D G3DSA:3.20.20.70 151 318 1.2E-204 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2548 e4e5158efa004343d6ceaf817804b805 130 Gene3D G3DSA:3.40.30.10 1 119 2.8E-43 T 14-10-2018 MC28_2548 e4e5158efa004343d6ceaf817804b805 130 Pfam PF03960 ArsC family 30 112 8.4E-22 T 14-10-2018 IPR006660 Arsenate reductase-like MC28_2548 e4e5158efa004343d6ceaf817804b805 130 SUPERFAMILY SSF52833 1 124 2.18E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_2548 e4e5158efa004343d6ceaf817804b805 130 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 8.3E-36 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR MC28_0166 01d71c204e6b16e7b7fc8f91fd9d62e7 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 1.3E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_0166 01d71c204e6b16e7b7fc8f91fd9d62e7 330 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0166 01d71c204e6b16e7b7fc8f91fd9d62e7 330 SUPERFAMILY SSF52540 5 254 4.98E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0166 01d71c204e6b16e7b7fc8f91fd9d62e7 330 Gene3D G3DSA:3.40.50.300 3 329 2.8E-97 T 14-10-2018 MC28_0166 01d71c204e6b16e7b7fc8f91fd9d62e7 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 5.2E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_0166 01d71c204e6b16e7b7fc8f91fd9d62e7 330 SMART SM00382 34 241 6.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0166 01d71c204e6b16e7b7fc8f91fd9d62e7 330 Pfam PF00005 ABC transporter 26 183 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2277 3f8b40adb5c263df3bba9d198587218c 219 Pfam PF02698 DUF218 domain 57 186 7.8E-27 T 14-10-2018 IPR003848 Domain of unknown function DUF218 MC28_2644 64532aa69965e391a0081268fdf18384 385 Gene3D G3DSA:3.75.10.10 34 385 8.3E-105 T 14-10-2018 MC28_2644 64532aa69965e391a0081268fdf18384 385 SUPERFAMILY SSF55909 41 381 3.21E-102 T 14-10-2018 MC28_2644 64532aa69965e391a0081268fdf18384 385 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 49 381 8.5E-92 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 MC28_0035 5770502cb6a70efbefd104a1ac5f3ccc 139 PIRSF PIRSF036659 1 139 6.9E-60 T 14-10-2018 IPR012187 Disulphide bond formation protein BdbC MC28_0035 5770502cb6a70efbefd104a1ac5f3ccc 139 Gene3D G3DSA:1.20.1550.10 3 114 7.3E-11 T 14-10-2018 IPR023380 DsbB-like superfamily MC28_0035 5770502cb6a70efbefd104a1ac5f3ccc 139 Pfam PF02600 Disulfide bond formation protein DsbB 10 115 8.6E-11 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 MC28_0035 5770502cb6a70efbefd104a1ac5f3ccc 139 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 4 139 24.597 T 14-10-2018 IPR012187 Disulphide bond formation protein BdbC MC28_0035 5770502cb6a70efbefd104a1ac5f3ccc 139 SUPERFAMILY SSF158442 12 135 1.07E-28 T 14-10-2018 IPR023380 DsbB-like superfamily MC28_0552 53b374b85beec78aae8a58e10303efc7 338 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0552 53b374b85beec78aae8a58e10303efc7 338 Pfam PF08402 TOBE domain 254 329 7.1E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 MC28_0552 53b374b85beec78aae8a58e10303efc7 338 SMART SM00382 34 217 2.0E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0552 53b374b85beec78aae8a58e10303efc7 338 SUPERFAMILY SSF50331 249 329 1.93E-5 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal MC28_0552 53b374b85beec78aae8a58e10303efc7 338 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 7 253 2.1E-138 T 14-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 MC28_0552 53b374b85beec78aae8a58e10303efc7 338 Pfam PF00005 ABC transporter 25 167 8.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0552 53b374b85beec78aae8a58e10303efc7 338 SUPERFAMILY SSF52540 10 246 4.13E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0552 53b374b85beec78aae8a58e10303efc7 338 Gene3D G3DSA:3.40.50.300 7 311 3.0E-80 T 14-10-2018 MC28_1421 e2a2556598d64bc64b06738e76fe61c0 280 Gene3D G3DSA:3.40.50.10170 1 152 1.3E-54 T 14-10-2018 MC28_1421 e2a2556598d64bc64b06738e76fe61c0 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 4.2E-104 T 14-10-2018 IPR003797 DegV MC28_1421 e2a2556598d64bc64b06738e76fe61c0 280 SUPERFAMILY SSF82549 1 279 1.44E-94 T 14-10-2018 MC28_1421 e2a2556598d64bc64b06738e76fe61c0 280 Gene3D G3DSA:3.30.1180.10 153 279 3.5E-37 T 14-10-2018 MC28_1421 e2a2556598d64bc64b06738e76fe61c0 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 279 2.3E-94 T 14-10-2018 IPR003797 DegV MC28_1897 85be7e58a8eb87851c7b3e967feee9d4 283 Gene3D G3DSA:3.40.1090.10 60 227 9.8E-15 T 14-10-2018 MC28_1897 85be7e58a8eb87851c7b3e967feee9d4 283 SUPERFAMILY SSF52151 2 274 1.07E-46 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MC28_1897 85be7e58a8eb87851c7b3e967feee9d4 283 Pfam PF01734 Patatin-like phospholipase 6 169 1.5E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 MC28_1897 85be7e58a8eb87851c7b3e967feee9d4 283 Gene3D G3DSA:3.40.1090.20 1 59 3.0E-6 T 14-10-2018 MC28_4000 3fa41c888e72e71a90e42a8f8626b892 146 SUPERFAMILY SSF52540 3 112 2.23E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4000 3fa41c888e72e71a90e42a8f8626b892 146 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 2 112 1.1E-23 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 MC28_4000 3fa41c888e72e71a90e42a8f8626b892 146 Gene3D G3DSA:3.40.50.300 1 146 1.7E-38 T 14-10-2018 MC28_1145 ed2162aed4a27b94935c104a8a13e1e7 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1145 ed2162aed4a27b94935c104a8a13e1e7 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1145 ed2162aed4a27b94935c104a8a13e1e7 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1145 ed2162aed4a27b94935c104a8a13e1e7 147 Gene3D G3DSA:1.10.10.10 3 143 2.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1145 ed2162aed4a27b94935c104a8a13e1e7 147 SMART SM00347 27 124 2.5E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1145 ed2162aed4a27b94935c104a8a13e1e7 147 SUPERFAMILY SSF46785 9 138 2.66E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1145 ed2162aed4a27b94935c104a8a13e1e7 147 Pfam PF01047 MarR family 34 85 3.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 Gene3D G3DSA:1.20.190.10 72 297 5.9E-69 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 Gene3D G3DSA:2.100.10.10 309 515 1.7E-63 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 Pfam PF00555 delta endotoxin 305 516 5.6E-20 T 14-10-2018 IPR001178 Pesticidal crystal protein, central domain GO:0005102|GO:0009405 MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 Gene3D G3DSA:2.60.120.260 299 666 1.7E-63 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 SUPERFAMILY SSF56849 45 295 2.49E-68 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 Pfam PF03945 delta endotoxin, N-terminal domain 102 295 1.1E-26 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 SUPERFAMILY SSF51096 299 517 9.24E-24 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 Pfam PF03944 delta endotoxin 527 667 1.2E-22 T 14-10-2018 IPR005638 Pesticidal crystal protein, C-terminal GO:0090729 MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 SUPERFAMILY SSF49785 518 668 4.04E-26 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 SUPERFAMILY SSF49785 1051 1161 1.36E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C001 82250eceb9382bb16c410a9f7d27d48e 1216 Gene3D G3DSA:2.60.120.260 1048 1212 1.1E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_1298 380a7d860afa5e9fff28c255f8a26f59 380 Gene3D G3DSA:3.60.21.10 7 256 1.2E-41 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_1298 380a7d860afa5e9fff28c255f8a26f59 380 SUPERFAMILY SSF56300 14 229 9.34E-36 T 14-10-2018 MC28_1298 380a7d860afa5e9fff28c255f8a26f59 380 Pfam PF00149 Calcineurin-like phosphoesterase 19 207 1.2E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_0601 27f0662ffa26725e76cac86508801424 185 Pfam PF00857 Isochorismatase family 7 180 6.3E-36 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_0601 27f0662ffa26725e76cac86508801424 185 SUPERFAMILY SSF52499 4 183 1.83E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_0601 27f0662ffa26725e76cac86508801424 185 Gene3D G3DSA:3.40.50.850 4 185 2.2E-53 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_4968 3e5b2867144f0f8ea046011c30c0ba9f 268 PRINTS PR00114 Serine/threonine phosphatase family signature 3 30 3.9E-5 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_4968 3e5b2867144f0f8ea046011c30c0ba9f 268 PRINTS PR00114 Serine/threonine phosphatase family signature 33 60 3.9E-5 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_4968 3e5b2867144f0f8ea046011c30c0ba9f 268 PRINTS PR00114 Serine/threonine phosphatase family signature 66 90 3.9E-5 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_4968 3e5b2867144f0f8ea046011c30c0ba9f 268 SUPERFAMILY SSF56300 3 244 1.14E-27 T 14-10-2018 MC28_4968 3e5b2867144f0f8ea046011c30c0ba9f 268 Pfam PF00149 Calcineurin-like phosphoesterase 3 109 1.5E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_4775 ab46386bdbc2eca4073eb994aa2be081 161 Gene3D G3DSA:2.40.50.140 1 84 1.4E-29 T 14-10-2018 MC28_4775 ab46386bdbc2eca4073eb994aa2be081 161 Pfam PF00575 S1 RNA binding domain 4 74 3.4E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 MC28_4775 ab46386bdbc2eca4073eb994aa2be081 161 SMART SM00316 4 74 6.8E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_4775 ab46386bdbc2eca4073eb994aa2be081 161 SUPERFAMILY SSF50249 4 81 1.39E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3791 2a8d3ed6e8422b29085874183fd23d50 266 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 189 206 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site MC28_3791 2a8d3ed6e8422b29085874183fd23d50 266 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 221 7.0E-25 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel MC28_2899 f45eba8f7d0275c4eed62f5ef513446d 252 SUPERFAMILY SSF53335 24 250 8.36E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2899 f45eba8f7d0275c4eed62f5ef513446d 252 Gene3D G3DSA:3.40.50.150 24 251 1.1E-38 T 14-10-2018 MC28_2899 f45eba8f7d0275c4eed62f5ef513446d 252 Pfam PF13649 Methyltransferase domain 70 166 7.9E-15 T 14-10-2018 MC28_5251 687d92a339656ed7abe2a2e54f0e47c5 176 Pfam PF04167 Protein of unknown function (DUF402) 60 124 6.4E-17 T 14-10-2018 IPR007295 Domain of unknown function DUF402 MC28_5251 687d92a339656ed7abe2a2e54f0e47c5 176 SUPERFAMILY SSF159234 2 171 1.18E-30 T 14-10-2018 IPR035930 FomD-like superfamily MC28_5251 687d92a339656ed7abe2a2e54f0e47c5 176 Gene3D G3DSA:2.40.380.10 19 169 2.0E-11 T 14-10-2018 IPR035930 FomD-like superfamily MC28_5251 687d92a339656ed7abe2a2e54f0e47c5 176 PIRSF PIRSF028345 1 176 1.9E-80 T 14-10-2018 IPR016882 Uncharacterised protein family UPF0374 MC28_5251 687d92a339656ed7abe2a2e54f0e47c5 176 Hamap MF_01568 UPF0374 protein . 1 175 51.758 T 14-10-2018 IPR016882 Uncharacterised protein family UPF0374 MC28_1249 35cfb3a2befd2866b92946753d020370 150 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 69 148 1.3E-31 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 MC28_1249 35cfb3a2befd2866b92946753d020370 150 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 147 40.554 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 MC28_1249 35cfb3a2befd2866b92946753d020370 150 Gene3D G3DSA:3.30.160.70 1 62 1.2E-12 T 14-10-2018 MC28_1249 35cfb3a2befd2866b92946753d020370 150 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 67 146 3.9E-34 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 MC28_1249 35cfb3a2befd2866b92946753d020370 150 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 117 123 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 MC28_1249 35cfb3a2befd2866b92946753d020370 150 Gene3D G3DSA:1.10.10.10 66 149 1.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1249 35cfb3a2befd2866b92946753d020370 150 SUPERFAMILY SSF53155 1 71 5.69E-18 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 MC28_1249 35cfb3a2befd2866b92946753d020370 150 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 63 1.7E-5 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 MC28_1249 35cfb3a2befd2866b92946753d020370 150 SUPERFAMILY SSF46767 66 148 4.05E-31 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 MC28_4506 6569d428e7705862b7c3b99243089ead 351 SUPERFAMILY SSF53756 48 349 2.69E-64 T 14-10-2018 MC28_4506 6569d428e7705862b7c3b99243089ead 351 Gene3D G3DSA:3.40.50.2000 165 348 8.6E-36 T 14-10-2018 MC28_4506 6569d428e7705862b7c3b99243089ead 351 Pfam PF13439 Glycosyltransferase Family 4 55 155 2.0E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 MC28_4506 6569d428e7705862b7c3b99243089ead 351 Gene3D G3DSA:3.40.50.2000 4 164 1.5E-23 T 14-10-2018 MC28_4506 6569d428e7705862b7c3b99243089ead 351 Pfam PF00534 Glycosyl transferases group 1 176 323 1.5E-25 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_2641 3ddeb4ce7b3a27b12368d6f176e6f3a4 325 Gene3D G3DSA:3.75.10.10 11 297 1.6E-36 T 14-10-2018 MC28_2641 3ddeb4ce7b3a27b12368d6f176e6f3a4 325 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 56 298 9.6E-27 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 MC28_2641 3ddeb4ce7b3a27b12368d6f176e6f3a4 325 SUPERFAMILY SSF55909 24 298 2.32E-48 T 14-10-2018 MC28_0310 420e443ce9263683f604e57879284063 133 Gene3D G3DSA:1.10.10.10 9 73 7.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0310 420e443ce9263683f604e57879284063 133 Gene3D G3DSA:1.10.4040.10 74 125 5.3E-16 T 14-10-2018 MC28_0310 420e443ce9263683f604e57879284063 133 SUPERFAMILY SSF46785 6 126 3.25E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0310 420e443ce9263683f604e57879284063 133 Pfam PF03965 Penicillinase repressor 8 123 2.7E-39 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 MC28_0310 420e443ce9263683f604e57879284063 133 PIRSF PIRSF019455 1 133 5.8E-40 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 MC28_1905 f76d245daae098416490b58eb98e5891 126 PIRSF PIRSF026568 1 126 1.0E-80 T 14-10-2018 IPR014527 Excinuclease GIY-YIG catalytic domain-containing uncharacterised conserved protein MC28_1905 f76d245daae098416490b58eb98e5891 126 Pfam PF01541 GIY-YIG catalytic domain 45 119 3.0E-12 T 14-10-2018 IPR000305 GIY-YIG endonuclease MC28_1905 f76d245daae098416490b58eb98e5891 126 Gene3D G3DSA:3.40.1440.10 39 124 9.7E-14 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 MC28_1905 f76d245daae098416490b58eb98e5891 126 SUPERFAMILY SSF82771 44 122 1.57E-13 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 MC28_1905 f76d245daae098416490b58eb98e5891 126 SMART SM00465 45 124 7.0E-15 T 14-10-2018 IPR000305 GIY-YIG endonuclease MC28_3571 0d3832fdbba1ce6e4333fe0c93448f91 137 Gene3D G3DSA:1.10.10.10 1 83 2.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3571 0d3832fdbba1ce6e4333fe0c93448f91 137 Pfam PF01475 Ferric uptake regulator family 12 129 3.9E-28 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 MC28_3571 0d3832fdbba1ce6e4333fe0c93448f91 137 Gene3D G3DSA:3.30.1490.190 87 137 5.3E-14 T 14-10-2018 MC28_3571 0d3832fdbba1ce6e4333fe0c93448f91 137 SUPERFAMILY SSF46785 5 133 1.2E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5339 d7440203bd5f642e4bc42da403dd636f 449 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 18 200 2.4E-53 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 MC28_5339 d7440203bd5f642e4bc42da403dd636f 449 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 226 448 5.2E-42 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 MC28_5339 d7440203bd5f642e4bc42da403dd636f 449 Pfam PF00854 POT family 94 199 4.9E-24 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 MC28_5339 d7440203bd5f642e4bc42da403dd636f 449 Pfam PF00854 POT family 229 415 3.9E-34 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 MC28_5339 d7440203bd5f642e4bc42da403dd636f 449 Gene3D G3DSA:1.20.1250.20 5 226 4.5E-70 T 14-10-2018 MC28_5339 d7440203bd5f642e4bc42da403dd636f 449 Gene3D G3DSA:1.20.1250.20 227 449 7.5E-56 T 14-10-2018 MC28_5339 d7440203bd5f642e4bc42da403dd636f 449 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 156 168 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 MC28_5339 d7440203bd5f642e4bc42da403dd636f 449 SUPERFAMILY SSF103473 13 445 6.67E-38 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4254 552be0a321f91c7b2e3621268b55a09a 102 Gene3D G3DSA:3.40.30.10 8 102 7.2E-15 T 14-10-2018 MC28_4254 552be0a321f91c7b2e3621268b55a09a 102 SUPERFAMILY SSF52833 4 100 3.18E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_4254 552be0a321f91c7b2e3621268b55a09a 102 Pfam PF00085 Thioredoxin 14 90 6.2E-10 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 MC28_2810 8ff0af16dec9aecdcf2cf5da0ddd67b0 303 Pfam PF00005 ABC transporter 24 164 1.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2810 8ff0af16dec9aecdcf2cf5da0ddd67b0 303 SUPERFAMILY SSF52540 6 222 3.41E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2810 8ff0af16dec9aecdcf2cf5da0ddd67b0 303 Gene3D G3DSA:3.40.50.300 1 249 2.5E-64 T 14-10-2018 MC28_2810 8ff0af16dec9aecdcf2cf5da0ddd67b0 303 SMART SM00382 32 213 4.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2810 8ff0af16dec9aecdcf2cf5da0ddd67b0 303 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3087 31e9999b5759ab468456117c92123993 362 SUPERFAMILY SSF102114 102 320 9.42E-14 T 14-10-2018 MC28_3087 31e9999b5759ab468456117c92123993 362 Gene3D G3DSA:1.10.150.530 1 77 4.3E-21 T 14-10-2018 MC28_3087 31e9999b5759ab468456117c92123993 362 Pfam PF04055 Radical SAM superfamily 119 289 1.7E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_3087 31e9999b5759ab468456117c92123993 362 PIRSF PIRSF006004 7 362 1.0E-134 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 MC28_3087 31e9999b5759ab468456117c92123993 362 Pfam PF13394 4Fe-4S single cluster domain 124 217 7.9E-5 T 14-10-2018 MC28_3087 31e9999b5759ab468456117c92123993 362 Gene3D G3DSA:3.20.20.70 80 343 1.3E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_3087 31e9999b5759ab468456117c92123993 362 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 16 358 71.209 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 MC28_3087 31e9999b5759ab468456117c92123993 362 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 13 362 2.3E-159 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 MC28_5103 650f290ac15f6e5c7b8f30f19b0fcd26 580 SMART SM00304 223 274 1.7E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5103 650f290ac15f6e5c7b8f30f19b0fcd26 580 SMART SM00304 519 575 28.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5103 650f290ac15f6e5c7b8f30f19b0fcd26 580 SMART SM00283 303 578 4.3E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_5103 650f290ac15f6e5c7b8f30f19b0fcd26 580 SUPERFAMILY SSF58104 250 578 1.96E-65 T 14-10-2018 MC28_5103 650f290ac15f6e5c7b8f30f19b0fcd26 580 Gene3D G3DSA:1.10.287.950 270 578 7.5E-67 T 14-10-2018 MC28_5103 650f290ac15f6e5c7b8f30f19b0fcd26 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 2.1E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_5103 650f290ac15f6e5c7b8f30f19b0fcd26 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 13 38 2.1E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_5103 650f290ac15f6e5c7b8f30f19b0fcd26 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 428 2.1E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_5103 650f290ac15f6e5c7b8f30f19b0fcd26 580 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 356 531 8.1E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_3325 556576c55cf18139d5da9849f9612604 393 PIRSF PIRSF031134 1 388 2.3E-153 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 MC28_3325 556576c55cf18139d5da9849f9612604 393 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 393 182.086 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 MC28_3325 556576c55cf18139d5da9849f9612604 393 Gene3D G3DSA:3.30.200.20 1 111 5.7E-41 T 14-10-2018 MC28_3325 556576c55cf18139d5da9849f9612604 393 Pfam PF01636 Phosphotransferase enzyme family 29 259 1.5E-10 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_3325 556576c55cf18139d5da9849f9612604 393 SUPERFAMILY SSF56112 3 371 1.18E-83 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_3325 556576c55cf18139d5da9849f9612604 393 Gene3D G3DSA:3.90.1200.10 112 388 1.5E-101 T 14-10-2018 MC28_3325 556576c55cf18139d5da9849f9612604 393 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 31 384 3.5E-133 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 MC28_G328 76931e7065fe3126b08a93e32a494f93 130 Gene3D G3DSA:3.10.450.50 2 129 5.2E-28 T 14-10-2018 MC28_G328 76931e7065fe3126b08a93e32a494f93 130 Pfam PF12680 SnoaL-like domain 12 114 6.9E-9 T 14-10-2018 IPR037401 SnoaL-like domain MC28_G328 76931e7065fe3126b08a93e32a494f93 130 SUPERFAMILY SSF54427 1 129 1.22E-28 T 14-10-2018 IPR032710 NTF2-like domain superfamily MC28_3556 e08cb4338fd780541007508d000e1dfe 327 Gene3D G3DSA:3.30.420.40 130 303 1.1E-110 T 14-10-2018 MC28_3556 e08cb4338fd780541007508d000e1dfe 327 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 323 3.6E-123 T 14-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 MC28_3556 e08cb4338fd780541007508d000e1dfe 327 Gene3D G3DSA:3.30.420.40 7 315 1.1E-110 T 14-10-2018 MC28_3556 e08cb4338fd780541007508d000e1dfe 327 Pfam PF00480 ROK family 7 319 1.9E-79 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 MC28_3556 e08cb4338fd780541007508d000e1dfe 327 ProSitePatterns PS01125 ROK family signature. 139 166 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 MC28_3556 e08cb4338fd780541007508d000e1dfe 327 SUPERFAMILY SSF53067 5 320 3.44E-71 T 14-10-2018 MC28_1120 af07479f77ff189238fbd3d5cfa873e2 139 Gene3D G3DSA:3.10.180.10 1 138 6.3E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1120 af07479f77ff189238fbd3d5cfa873e2 139 SUPERFAMILY SSF54593 3 135 2.34E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1120 af07479f77ff189238fbd3d5cfa873e2 139 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 119 2.3E-20 T 14-10-2018 MC28_4645 8436feaf50a6768f181f0d7d89785979 523 Gene3D G3DSA:3.30.565.10 404 522 4.4E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4645 8436feaf50a6768f181f0d7d89785979 523 SUPERFAMILY SSF55781 185 344 1.02E-10 T 14-10-2018 MC28_4645 8436feaf50a6768f181f0d7d89785979 523 Pfam PF07730 Histidine kinase 333 400 3.6E-20 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MC28_4645 8436feaf50a6768f181f0d7d89785979 523 Pfam PF13492 GAF domain 203 318 4.6E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_4645 8436feaf50a6768f181f0d7d89785979 523 Gene3D G3DSA:3.30.450.40 7 178 2.9E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_4645 8436feaf50a6768f181f0d7d89785979 523 SMART SM00065 197 326 0.0094 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_4645 8436feaf50a6768f181f0d7d89785979 523 SMART SM00065 25 176 9.9E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_4645 8436feaf50a6768f181f0d7d89785979 523 SUPERFAMILY SSF55781 28 179 3.27E-19 T 14-10-2018 MC28_4645 8436feaf50a6768f181f0d7d89785979 523 Pfam PF13185 GAF domain 29 166 6.6E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_4645 8436feaf50a6768f181f0d7d89785979 523 Gene3D G3DSA:3.30.450.40 184 331 1.3E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_4645 8436feaf50a6768f181f0d7d89785979 523 SUPERFAMILY SSF55874 403 521 7.29E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0220 853b194edc77f5b2c0f6fdc7e3f65f76 213 Gene3D G3DSA:3.40.50.360 1 213 4.2E-62 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0220 853b194edc77f5b2c0f6fdc7e3f65f76 213 SUPERFAMILY SSF52218 1 210 2.56E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0220 853b194edc77f5b2c0f6fdc7e3f65f76 213 Pfam PF02525 Flavodoxin-like fold 3 205 1.4E-39 T 14-10-2018 IPR003680 Flavodoxin-like fold MC28_0220 853b194edc77f5b2c0f6fdc7e3f65f76 213 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 210 26.518 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 MC28_1641 df42356062b7970864510a90ccfae744 219 SUPERFAMILY SSF52540 6 165 6.0E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1641 df42356062b7970864510a90ccfae744 219 Gene3D G3DSA:3.40.50.300 8 202 1.9E-15 T 14-10-2018 MC28_2744 22f8a79191e409c818971232f0338eb2 200 Gene3D G3DSA:1.10.357.10 7 196 5.6E-28 T 14-10-2018 MC28_2744 22f8a79191e409c818971232f0338eb2 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 9.2E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2744 22f8a79191e409c818971232f0338eb2 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2744 22f8a79191e409c818971232f0338eb2 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2744 22f8a79191e409c818971232f0338eb2 200 SUPERFAMILY SSF46689 9 86 5.49E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2132 e249c99a69a3c3d9d412b12ab53aabe7 454 Pfam PF07690 Major Facilitator Superfamily 3 376 2.0E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2132 e249c99a69a3c3d9d412b12ab53aabe7 454 SUPERFAMILY SSF103473 2 442 2.49E-55 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2132 e249c99a69a3c3d9d412b12ab53aabe7 454 Gene3D G3DSA:1.20.1720.10 1 191 1.0E-33 T 14-10-2018 MC28_2132 e249c99a69a3c3d9d412b12ab53aabe7 454 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 1 416 9.6E-108 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 MC28_2132 e249c99a69a3c3d9d412b12ab53aabe7 454 Gene3D G3DSA:1.20.1250.20 227 442 8.8E-21 T 14-10-2018 MC28_3387 cc45fa138596ee094eb55d915bcc9304 179 PRINTS PR00502 NUDIX hydrolase family signature 72 86 3.5E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_3387 cc45fa138596ee094eb55d915bcc9304 179 PRINTS PR00502 NUDIX hydrolase family signature 86 101 3.5E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_3387 cc45fa138596ee094eb55d915bcc9304 179 Gene3D G3DSA:3.90.79.10 4 179 7.8E-56 T 14-10-2018 MC28_3387 cc45fa138596ee094eb55d915bcc9304 179 SUPERFAMILY SSF55811 8 178 9.34E-52 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_3387 cc45fa138596ee094eb55d915bcc9304 179 ProSitePatterns PS00893 Nudix box signature. 77 98 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_3387 cc45fa138596ee094eb55d915bcc9304 179 Pfam PF00293 NUDIX domain 43 164 3.2E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_0780 2909e7f7878c89379803ff282f3c25e0 236 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 130 201 1.2E-25 T 14-10-2018 IPR006343 DnaD domain MC28_0780 2909e7f7878c89379803ff282f3c25e0 236 Pfam PF07261 Replication initiation and membrane attachment 132 202 6.2E-26 T 14-10-2018 IPR006343 DnaD domain MC28_0780 2909e7f7878c89379803ff282f3c25e0 236 SUPERFAMILY SSF46785 30 87 4.82E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0780 2909e7f7878c89379803ff282f3c25e0 236 Gene3D G3DSA:1.10.10.10 2 116 2.2E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0780 2909e7f7878c89379803ff282f3c25e0 236 SUPERFAMILY SSF158499 131 196 1.83E-19 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_0780 2909e7f7878c89379803ff282f3c25e0 236 Gene3D G3DSA:1.10.10.630 127 202 1.1E-31 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_5045 811a23740df3616e09144e437d077688 378 Pfam PF01522 Polysaccharide deacetylase 213 334 3.1E-16 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_5045 811a23740df3616e09144e437d077688 378 Gene3D G3DSA:3.20.20.370 160 378 1.4E-64 T 14-10-2018 MC28_5045 811a23740df3616e09144e437d077688 378 Gene3D G3DSA:2.60.40.3760 63 159 2.6E-42 T 14-10-2018 MC28_5045 811a23740df3616e09144e437d077688 378 SUPERFAMILY SSF88713 180 349 6.67E-27 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_E144 b9d639b335104864027aeb0f30957e43 349 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 47 325 5.0E-20 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system MC28_2427 4e1193a9f7929bfac72f1c79c03335ea 401 Gene3D G3DSA:1.20.1250.20 7 382 5.0E-62 T 14-10-2018 MC28_2427 4e1193a9f7929bfac72f1c79c03335ea 401 Pfam PF07690 Major Facilitator Superfamily 17 349 2.6E-58 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2427 4e1193a9f7929bfac72f1c79c03335ea 401 SUPERFAMILY SSF103473 3 393 1.83E-70 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2483 29fc79738191f39d26a3516a9c6c046d 350 SUPERFAMILY SSF46785 18 82 7.96E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2483 29fc79738191f39d26a3516a9c6c046d 350 Gene3D G3DSA:1.10.10.10 16 82 1.8E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2483 29fc79738191f39d26a3516a9c6c046d 350 Gene3D G3DSA:3.30.420.40 204 243 1.4E-28 T 14-10-2018 MC28_2483 29fc79738191f39d26a3516a9c6c046d 350 Gene3D G3DSA:3.30.420.40 91 203 1.4E-28 T 14-10-2018 MC28_2483 29fc79738191f39d26a3516a9c6c046d 350 SUPERFAMILY SSF53067 89 251 2.06E-18 T 14-10-2018 MC28_2483 29fc79738191f39d26a3516a9c6c046d 350 Pfam PF00480 ROK family 124 239 2.4E-17 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 MC28_0747 eb9500da9a8a4dd186ceb4f6115b136a 243 Gene3D G3DSA:3.40.50.150 21 240 5.8E-66 T 14-10-2018 MC28_0747 eb9500da9a8a4dd186ceb4f6115b136a 243 SUPERFAMILY SSF53335 9 235 4.14E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0747 eb9500da9a8a4dd186ceb4f6115b136a 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 26 41 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 MC28_0747 eb9500da9a8a4dd186ceb4f6115b136a 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 7 239 1.5E-102 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 MC28_0747 eb9500da9a8a4dd186ceb4f6115b136a 243 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 9 239 3.1E-134 T 14-10-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 MC28_0747 eb9500da9a8a4dd186ceb4f6115b136a 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 15 239 3.6E-81 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 MC28_0747 eb9500da9a8a4dd186ceb4f6115b136a 243 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 147 161 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 MC28_0747 eb9500da9a8a4dd186ceb4f6115b136a 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 6 239 36.583 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 MC28_0231 33e09b4a420e8969d5c656a749f66354 129 Pfam PF11181 Heat induced stress protein YflT 12 109 2.0E-29 T 14-10-2018 IPR025889 General stress protein 17M-like domain MC28_2000 a8ab11854a32416508d19ab8766d7794 117 Gene3D G3DSA:1.10.10.10 1 116 1.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2000 a8ab11854a32416508d19ab8766d7794 117 SUPERFAMILY SSF46785 9 108 3.68E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2000 a8ab11854a32416508d19ab8766d7794 117 Pfam PF03551 Transcriptional regulator PadR-like family 19 84 1.4E-17 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_F129 fdce1627e48db13e36166a75e2d1afa4 576 SUPERFAMILY SSF56601 169 572 1.05E-56 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_F129 fdce1627e48db13e36166a75e2d1afa4 576 Gene3D G3DSA:3.40.710.10 212 574 7.3E-68 T 14-10-2018 MC28_F129 fdce1627e48db13e36166a75e2d1afa4 576 Gene3D G3DSA:3.90.1310.30 30 211 4.7E-30 T 14-10-2018 MC28_F129 fdce1627e48db13e36166a75e2d1afa4 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 37 203 3.3E-30 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_F129 fdce1627e48db13e36166a75e2d1afa4 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 241 567 3.5E-43 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_F129 fdce1627e48db13e36166a75e2d1afa4 576 SUPERFAMILY SSF56519 32 214 6.28E-31 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_F047 198c0a054cca270018a1651accb98636 53 SUPERFAMILY SSF140500 5 49 1.19E-10 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_F047 198c0a054cca270018a1651accb98636 53 Gene3D G3DSA:1.20.58.990 2 53 5.7E-18 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_F047 198c0a054cca270018a1651accb98636 53 Pfam PF09388 Spo0E like sporulation regulatory protein 12 47 2.6E-8 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 MC28_0332 cc0dc7fd83a6ea77c738ba328236d893 325 Pfam PF01966 HD domain 49 116 5.2E-9 T 14-10-2018 IPR006674 HD domain MC28_0332 cc0dc7fd83a6ea77c738ba328236d893 325 SMART SM00471 45 159 9.9E-7 T 14-10-2018 IPR003607 HD/PDEase domain MC28_0332 cc0dc7fd83a6ea77c738ba328236d893 325 Gene3D G3DSA:1.10.3210.10 2 259 5.7E-41 T 14-10-2018 MC28_0332 cc0dc7fd83a6ea77c738ba328236d893 325 SUPERFAMILY SSF109604 3 260 2.92E-46 T 14-10-2018 MC28_1286 d2e60144579a0b4652b172ad6bc963e2 340 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 57 327 4.8E-69 T 14-10-2018 IPR010897 Sporulation stage II, protein P MC28_1286 d2e60144579a0b4652b172ad6bc963e2 340 SUPERFAMILY SSF53187 164 332 1.0E-6 T 14-10-2018 MC28_1286 d2e60144579a0b4652b172ad6bc963e2 340 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 132 332 6.9E-66 T 14-10-2018 IPR010897 Sporulation stage II, protein P MC28_E122 8fd0ebbd25a4288056455907267b3c94 299 SUPERFAMILY SSF54211 21 178 1.9E-18 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_E122 8fd0ebbd25a4288056455907267b3c94 299 PIRSF PIRSF033887 2 299 2.6E-110 T 14-10-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 MC28_E122 8fd0ebbd25a4288056455907267b3c94 299 Gene3D G3DSA:3.30.230.10 46 158 1.1E-9 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_E122 8fd0ebbd25a4288056455907267b3c94 299 Pfam PF00288 GHMP kinases N terminal domain 97 130 6.9E-5 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 SUPERFAMILY SSF51604 138 428 2.97E-133 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 ProSitePatterns PS00164 Enolase signature. 337 350 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 Gene3D G3DSA:3.30.390.10 1 127 2.5E-59 T 14-10-2018 IPR029017 Enolase-like, N-terminal MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 PRINTS PR00148 Enolase signature 366 383 1.5E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 PRINTS PR00148 Enolase signature 107 123 1.5E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 PRINTS PR00148 Enolase signature 314 325 1.5E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 PRINTS PR00148 Enolase signature 337 351 1.5E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 PRINTS PR00148 Enolase signature 37 51 1.5E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 PRINTS PR00148 Enolase signature 161 174 1.5E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 SMART SM01193 4 134 1.5E-101 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 Pfam PF03952 Enolase, N-terminal domain 4 134 2.3E-62 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 1.7E-218 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 SMART SM01192 139 428 1.5E-226 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 PIRSF PIRSF001400 1 428 1.1E-197 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 Gene3D G3DSA:3.20.20.120 128 431 1.8E-139 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 427 4.1E-142 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 SUPERFAMILY SSF54826 3 138 3.83E-61 T 14-10-2018 MC28_4367 859487dea02d728e6d0c90ed232e6bb0 431 Hamap MF_00318 Enolase [eno]. 2 414 46.266 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_F019 e1e5d5a160a2302ad14527a3ba69fb26 153 SUPERFAMILY SSF52540 2 133 9.21E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F019 e1e5d5a160a2302ad14527a3ba69fb26 153 Gene3D G3DSA:3.40.50.300 1 130 1.2E-6 T 14-10-2018 MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 5.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 401 5.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 5.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 5.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 428 5.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 Pfam PF00232 Glycosyl hydrolase family 1 2 466 2.5E-168 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 Gene3D G3DSA:3.20.20.80 1 469 1.5E-174 T 14-10-2018 MC28_2929 6b60b72b17055633e6e0b17d104adcf0 469 SUPERFAMILY SSF51445 1 467 1.79E-169 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_0283 d9e17d668d8f797e0c5eff28e6a45a2f 235 Pfam PF12787 EcsC protein family 7 232 1.2E-76 T 14-10-2018 IPR024787 EcsC protein MC28_0283 d9e17d668d8f797e0c5eff28e6a45a2f 235 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 1 234 3.0E-116 T 14-10-2018 MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 SUPERFAMILY SSF51905 1 207 4.45E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 318 2.0E-43 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 Gene3D G3DSA:3.50.50.100 1 391 3.1E-115 T 14-10-2018 MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 SUPERFAMILY SSF51905 152 332 2.81E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.2E-12 T 14-10-2018 MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 1.2E-12 T 14-10-2018 MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.2E-12 T 14-10-2018 MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.2E-12 T 14-10-2018 MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 7.8E-7 T 14-10-2018 MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.8E-7 T 14-10-2018 MC28_4331 7425d5aed1652422ed11e0c4d45da851 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 297 7.8E-7 T 14-10-2018 MC28_4406 c0d51badb0de23df8674696f49308762 65 SMART SM00530 6 61 2.5E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_4406 c0d51badb0de23df8674696f49308762 65 Gene3D G3DSA:1.10.260.40 3 65 4.4E-26 T 14-10-2018 MC28_4406 c0d51badb0de23df8674696f49308762 65 Pfam PF01381 Helix-turn-helix 7 61 1.6E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_4406 c0d51badb0de23df8674696f49308762 65 SUPERFAMILY SSF47413 3 63 4.29E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2484 5122a12ae8cc4ada072040848191d76e 400 SUPERFAMILY SSF103473 23 395 1.57E-36 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2484 5122a12ae8cc4ada072040848191d76e 400 Gene3D G3DSA:1.20.1250.20 19 206 3.2E-10 T 14-10-2018 MC28_2484 5122a12ae8cc4ada072040848191d76e 400 Gene3D G3DSA:1.20.1250.20 210 397 6.9E-21 T 14-10-2018 MC28_2484 5122a12ae8cc4ada072040848191d76e 400 Pfam PF07690 Major Facilitator Superfamily 32 353 2.1E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1096 f345ce515d5bd644418a216f6358a41b 220 SUPERFAMILY SSF56112 38 185 2.08E-12 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_1096 f345ce515d5bd644418a216f6358a41b 220 Gene3D G3DSA:1.10.510.10 32 181 9.0E-9 T 14-10-2018 MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 7.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 7.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 7.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 Gene3D G3DSA:3.40.50.720 14 229 1.1E-53 T 14-10-2018 MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.0E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 3.0E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 3.0E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.0E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 Pfam PF00106 short chain dehydrogenase 15 199 9.3E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 SUPERFAMILY SSF51735 15 200 1.18E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1551 3e09f236a38ecdaa15dc5f1dd7fe0c88 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_D059 a5a23ac61ada94a6838108e4428f1e04 326 Gene3D G3DSA:1.10.150.130 3 105 7.9E-14 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_D059 a5a23ac61ada94a6838108e4428f1e04 326 Gene3D G3DSA:1.10.443.10 108 314 7.5E-14 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_D059 a5a23ac61ada94a6838108e4428f1e04 326 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 9 90 2.1E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_D059 a5a23ac61ada94a6838108e4428f1e04 326 SUPERFAMILY SSF47823 13 92 8.83E-5 T 14-10-2018 MC28_D059 a5a23ac61ada94a6838108e4428f1e04 326 SUPERFAMILY SSF56349 116 311 9.18E-19 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_D059 a5a23ac61ada94a6838108e4428f1e04 326 Pfam PF00589 Phage integrase family 148 311 1.2E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_1723 36046284f1e6329183f8b822dde759ae 295 SUPERFAMILY SSF56300 57 291 7.73E-35 T 14-10-2018 MC28_1723 36046284f1e6329183f8b822dde759ae 295 Pfam PF00149 Calcineurin-like phosphoesterase 64 233 1.8E-16 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_1723 36046284f1e6329183f8b822dde759ae 295 Gene3D G3DSA:3.60.21.10 63 250 1.3E-29 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 SMART SM00387 215 327 5.6E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 SUPERFAMILY SSF47384 98 168 1.28E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 Gene3D G3DSA:1.10.287.130 69 171 2.1E-5 T 14-10-2018 MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 281 8.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 305 8.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 253 267 8.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 324 8.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 Gene3D G3DSA:3.30.565.10 180 328 5.7E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 216 325 1.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_G146 9cf57e4eb5e5332c07ebde2ca350bd38 328 SUPERFAMILY SSF55874 161 325 8.38E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3346 dd0b1581d008c50208470db0da902b28 262 SUPERFAMILY SSF100950 1 232 6.98E-84 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_3346 dd0b1581d008c50208470db0da902b28 262 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 113 131 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 MC28_3346 dd0b1581d008c50208470db0da902b28 262 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 220 1.1E-18 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 MC28_3346 dd0b1581d008c50208470db0da902b28 262 Gene3D G3DSA:3.40.50.1360 1 232 7.2E-96 T 14-10-2018 MC28_3346 dd0b1581d008c50208470db0da902b28 262 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 234 39.492 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 MC28_1093 50acb41d62b25b4db32813d171d42bc5 662 PIRSF PIRSF018968 1 662 5.7E-69 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_1093 50acb41d62b25b4db32813d171d42bc5 662 Pfam PF02687 FtsX-like permease family 88 184 8.4E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 Gene3D G3DSA:3.30.565.10 205 363 1.4E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 Gene3D G3DSA:1.10.287.130 134 204 1.6E-16 T 14-10-2018 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 Gene3D G3DSA:1.20.1480.50 46 133 1.1E-5 T 14-10-2018 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 250 359 7.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 340 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 315 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 301 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 SMART SM00387 250 361 2.0E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 203 2.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 SMART SM00388 138 205 3.7E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 SUPERFAMILY SSF47384 124 205 2.55E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 SUPERFAMILY SSF55874 194 359 8.38E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 SMART SM00304 78 130 2.7E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4139 256fd007c006c8dac4ec34b7ac4e6991 365 SUPERFAMILY SSF158472 86 129 1.96E-5 T 14-10-2018 MC28_5255 6a82d5db1cfbcce2c04b7bf8bffb85c5 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_5255 6a82d5db1cfbcce2c04b7bf8bffb85c5 432 SUPERFAMILY SSF53383 2 426 4.87E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_5255 6a82d5db1cfbcce2c04b7bf8bffb85c5 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 95.322 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 MC28_5255 6a82d5db1cfbcce2c04b7bf8bffb85c5 432 Pfam PF00202 Aminotransferase class-III 36 412 6.5E-71 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_5255 6a82d5db1cfbcce2c04b7bf8bffb85c5 432 Gene3D G3DSA:3.40.640.10 72 320 1.8E-171 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_5255 6a82d5db1cfbcce2c04b7bf8bffb85c5 432 Gene3D G3DSA:3.90.1150.10 9 423 1.8E-171 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_5255 6a82d5db1cfbcce2c04b7bf8bffb85c5 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 426 2.4E-168 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 MC28_3145 d2c8a2d9d3b25b17f80a4dcc54dfe089 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.023 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3145 d2c8a2d9d3b25b17f80a4dcc54dfe089 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 2.8E-28 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3145 d2c8a2d9d3b25b17f80a4dcc54dfe089 57 Pfam PF01783 Ribosomal L32p protein family 2 57 4.9E-27 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3145 d2c8a2d9d3b25b17f80a4dcc54dfe089 57 SUPERFAMILY SSF57829 1 55 5.31E-22 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 MC28_C023 b455f68cb76654a7fbdd4bfdc695688c 130 Pfam PF01381 Helix-turn-helix 10 62 1.5E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_C023 b455f68cb76654a7fbdd4bfdc695688c 130 SUPERFAMILY SSF47413 2 67 2.82E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_C023 b455f68cb76654a7fbdd4bfdc695688c 130 SMART SM00530 9 64 7.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_C023 b455f68cb76654a7fbdd4bfdc695688c 130 Gene3D G3DSA:1.10.260.40 1 66 2.4E-19 T 14-10-2018 MC28_1789 92822022c46aca146d9b2b422f53c912 300 SUPERFAMILY SSF63829 6 290 1.6E-64 T 14-10-2018 MC28_1789 92822022c46aca146d9b2b422f53c912 300 Gene3D G3DSA:2.120.10.30 3 292 9.5E-101 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like MC28_1789 92822022c46aca146d9b2b422f53c912 300 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 15 258 9.6E-75 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region MC28_1789 92822022c46aca146d9b2b422f53c912 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 196 213 1.9E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) MC28_1789 92822022c46aca146d9b2b422f53c912 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 239 257 1.9E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) MC28_1789 92822022c46aca146d9b2b422f53c912 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 16 33 1.9E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) MC28_1789 92822022c46aca146d9b2b422f53c912 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 92 113 1.9E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) MC28_1789 92822022c46aca146d9b2b422f53c912 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 133 155 1.9E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) MC28_1789 92822022c46aca146d9b2b422f53c912 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 156 176 1.9E-46 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) MC28_G052 47f96b82f0d03eab9920c8cfee86861f 399 SUPERFAMILY SSF51905 121 261 2.99E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_G052 47f96b82f0d03eab9920c8cfee86861f 399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 126 1.7E-7 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_G052 47f96b82f0d03eab9920c8cfee86861f 399 SUPERFAMILY SSF51905 6 155 4.57E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_G052 47f96b82f0d03eab9920c8cfee86861f 399 Gene3D G3DSA:3.50.50.60 123 261 9.8E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_G052 47f96b82f0d03eab9920c8cfee86861f 399 Gene3D G3DSA:3.50.50.60 8 325 9.8E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3388 311f1b13d9cf9c0056ee255e63a209ef 45 Pfam PF13072 Protein of unknown function (DUF3936) 4 40 3.1E-22 T 14-10-2018 IPR025177 Cell division inhibitor MciZ MC28_3658 202bf72a287141bb906beefa09cec62c 342 Pfam PF01032 FecCD transport family 28 334 4.6E-97 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_3658 202bf72a287141bb906beefa09cec62c 342 Gene3D G3DSA:1.10.3470.10 16 339 3.3E-97 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3658 202bf72a287141bb906beefa09cec62c 342 SUPERFAMILY SSF81345 13 334 8.24E-84 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3159 08941dbf1769cc2e76136b6824383e4f 640 Pfam PF06605 Prophage endopeptidase tail 4 292 1.0E-49 T 14-10-2018 IPR010572 Prophage tail endopeptidase MC28_3159 08941dbf1769cc2e76136b6824383e4f 640 Gene3D G3DSA:3.55.50.40 59 143 4.2E-7 T 14-10-2018 MC28_3159 08941dbf1769cc2e76136b6824383e4f 640 Gene3D G3DSA:2.40.10.280 1 57 1.6E-8 T 14-10-2018 MC28_1662 5a91dd13b7c24b624bf35c5502f69b13 289 Pfam PF08281 Sigma-70, region 4 106 156 4.4E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_1662 5a91dd13b7c24b624bf35c5502f69b13 289 Gene3D G3DSA:1.10.1740.10 1 74 2.5E-13 T 14-10-2018 MC28_1662 5a91dd13b7c24b624bf35c5502f69b13 289 SUPERFAMILY SSF88946 4 91 2.35E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_1662 5a91dd13b7c24b624bf35c5502f69b13 289 Pfam PF04542 Sigma-70 region 2 6 71 1.1E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_1662 5a91dd13b7c24b624bf35c5502f69b13 289 Gene3D G3DSA:1.10.10.10 109 161 1.1E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1662 5a91dd13b7c24b624bf35c5502f69b13 289 SUPERFAMILY SSF54427 168 285 2.63E-8 T 14-10-2018 IPR032710 NTF2-like domain superfamily MC28_1662 5a91dd13b7c24b624bf35c5502f69b13 289 SUPERFAMILY SSF88659 80 157 1.4E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_1662 5a91dd13b7c24b624bf35c5502f69b13 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 160 1.9E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_1662 5a91dd13b7c24b624bf35c5502f69b13 289 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 6 285 5.8E-124 T 14-10-2018 IPR014303 RNA polymerase sigma-70, ECF type MC28_1017 7e0694501aa9dadb77c5c54f7ac4465b 403 Pfam PF07690 Major Facilitator Superfamily 23 361 1.7E-32 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1017 7e0694501aa9dadb77c5c54f7ac4465b 403 Gene3D G3DSA:1.20.1250.20 221 401 6.5E-25 T 14-10-2018 MC28_1017 7e0694501aa9dadb77c5c54f7ac4465b 403 Gene3D G3DSA:1.20.1250.20 5 195 2.1E-20 T 14-10-2018 MC28_1017 7e0694501aa9dadb77c5c54f7ac4465b 403 SUPERFAMILY SSF103473 12 395 1.96E-56 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 SMART SM00770 1 300 2.2E-45 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 Pfam PF00197 Trypsin and protease inhibitor 307 383 2.0E-4 T 14-10-2018 IPR002160 Proteinase inhibitor I3, Kunitz legume GO:0004866 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 Pfam PF00882 Zinc dependent phospholipase C 56 216 2.0E-16 T 14-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 ProDom PD003946 PHOSPHOLIPASE C PLCB HYDROLASE PRECURSOR PHOSPHATIDYLCHOLINE SIGNAL CHOLINEPHOSPHOHYDROLASE TOXIN PLC 55 288 3.0E-32 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 Gene3D G3DSA:2.80.10.50 303 434 2.0E-5 T 14-10-2018 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 SUPERFAMILY SSF50386 306 384 1.12E-6 T 14-10-2018 IPR011065 Kunitz inhibitor STI-like superfamily MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 ProSitePatterns PS00283 Soybean trypsin inhibitor (Kunitz) protease inhibitors family signature. 307 323 - T 14-10-2018 IPR002160 Proteinase inhibitor I3, Kunitz legume GO:0004866 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 Gene3D G3DSA:1.10.575.10 44 296 2.1E-83 T 14-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 SUPERFAMILY SSF48537 52 292 3.01E-32 T 14-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 PRINTS PR00479 Prokaryotic zinc-dependent phospholipase C signature 124 137 2.3E-15 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 PRINTS PR00479 Prokaryotic zinc-dependent phospholipase C signature 171 195 2.3E-15 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 PRINTS PR00479 Prokaryotic zinc-dependent phospholipase C signature 279 289 2.3E-15 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_1098 ffaf96d1cf13232f41e884f9234d5916 457 PRINTS PR00479 Prokaryotic zinc-dependent phospholipase C signature 148 170 2.3E-15 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_4050 e5e0d0b5d6838a4da306b1a602e7dc03 169 SMART SM00852 17 162 4.4E-34 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_4050 e5e0d0b5d6838a4da306b1a602e7dc03 169 Pfam PF00994 Probable molybdopterin binding domain 18 161 2.5E-38 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_4050 e5e0d0b5d6838a4da306b1a602e7dc03 169 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 MC28_4050 e5e0d0b5d6838a4da306b1a602e7dc03 169 PIRSF PIRSF006443 1 169 2.8E-69 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 MC28_4050 e5e0d0b5d6838a4da306b1a602e7dc03 169 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 14 157 2.5E-39 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_4050 e5e0d0b5d6838a4da306b1a602e7dc03 169 Gene3D G3DSA:3.40.980.10 1 169 8.5E-54 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_4050 e5e0d0b5d6838a4da306b1a602e7dc03 169 SUPERFAMILY SSF53218 8 165 1.44E-45 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_4921 4f314f42cd6552e2e7b3a1a807979fb1 326 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4921 4f314f42cd6552e2e7b3a1a807979fb1 326 Pfam PF00005 ABC transporter 26 183 4.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4921 4f314f42cd6552e2e7b3a1a807979fb1 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 2.3E-28 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_4921 4f314f42cd6552e2e7b3a1a807979fb1 326 Gene3D G3DSA:3.40.50.300 3 326 1.4E-101 T 14-10-2018 MC28_4921 4f314f42cd6552e2e7b3a1a807979fb1 326 SMART SM00382 34 233 2.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4921 4f314f42cd6552e2e7b3a1a807979fb1 326 SUPERFAMILY SSF52540 5 254 6.66E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4921 4f314f42cd6552e2e7b3a1a807979fb1 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 8.8E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_4390 69e6bda01f6ed52a19b794ec1946e432 145 Gene3D G3DSA:3.90.79.10 1 145 9.3E-39 T 14-10-2018 MC28_4390 69e6bda01f6ed52a19b794ec1946e432 145 SUPERFAMILY SSF55811 1 121 6.63E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_4390 69e6bda01f6ed52a19b794ec1946e432 145 PRINTS PR00502 NUDIX hydrolase family signature 19 33 8.5E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_4390 69e6bda01f6ed52a19b794ec1946e432 145 PRINTS PR00502 NUDIX hydrolase family signature 33 48 8.5E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_4390 69e6bda01f6ed52a19b794ec1946e432 145 Pfam PF00293 NUDIX domain 2 117 1.5E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 TIGRFAM TIGR00458 aspS_nondisc: aspartate--tRNA(Asn) ligase 15 432 2.2E-137 T 14-10-2018 IPR004523 Aspartate-tRNA synthetase, type 2 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 Hamap MF_02075 Aspartate--tRNA(Asp) ligase [aspS]. 5 432 40.326 T 14-10-2018 IPR004523 Aspartate-tRNA synthetase, type 2 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 Pfam PF00152 tRNA synthetases class II (D, K and N) 114 425 1.3E-83 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 Gene3D G3DSA:3.30.930.10 103 432 7.4E-104 T 14-10-2018 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 Gene3D G3DSA:2.40.50.140 5 102 3.0E-20 T 14-10-2018 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 SUPERFAMILY SSF55681 89 431 5.2E-86 T 14-10-2018 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 401 3.4E-22 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 199 212 3.4E-22 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 182 194 3.4E-22 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 347 363 3.4E-22 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 Pfam PF01336 OB-fold nucleic acid binding domain 21 93 3.0E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 MC28_1393 2d45e2eaba8c83b502977a77df190e7a 432 SUPERFAMILY SSF50249 10 101 9.21E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_G159 55c400061b3b0c2a5e39542505c8d0cd 226 Gene3D G3DSA:3.40.50.1110 33 225 8.7E-28 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_G159 55c400061b3b0c2a5e39542505c8d0cd 226 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 66 212 1.3E-12 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain MC28_G159 55c400061b3b0c2a5e39542505c8d0cd 226 SUPERFAMILY SSF52266 48 225 8.83E-27 T 14-10-2018 MC28_2752 10beaad0247e32359b3615ef72d94084 618 Gene3D G3DSA:3.20.70.20 42 599 5.6E-203 T 14-10-2018 MC28_2752 10beaad0247e32359b3615ef72d94084 618 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 28 617 5.1E-219 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 MC28_2752 10beaad0247e32359b3615ef72d94084 618 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 29 617 5.8E-206 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 MC28_2752 10beaad0247e32359b3615ef72d94084 618 SUPERFAMILY SSF51998 30 596 9.16E-160 T 14-10-2018 MC28_5424 a54ba28af15e581bffce1da763804491 615 Pfam PF02254 TrkA-N domain 407 514 3.4E-9 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 MC28_5424 a54ba28af15e581bffce1da763804491 615 SUPERFAMILY SSF116726 544 614 7.59E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_5424 a54ba28af15e581bffce1da763804491 615 Gene3D G3DSA:1.20.1530.20 9 402 1.4E-70 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily MC28_5424 a54ba28af15e581bffce1da763804491 615 Gene3D G3DSA:3.30.70.1450 536 615 1.4E-18 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_5424 a54ba28af15e581bffce1da763804491 615 Pfam PF02080 TrkA-C domain 548 614 4.4E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 MC28_5424 a54ba28af15e581bffce1da763804491 615 SUPERFAMILY SSF51735 402 545 6.71E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_5424 a54ba28af15e581bffce1da763804491 615 Pfam PF00999 Sodium/hydrogen exchanger family 18 391 3.8E-74 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 MC28_5424 a54ba28af15e581bffce1da763804491 615 Gene3D G3DSA:3.40.50.720 403 535 3.7E-16 T 14-10-2018 MC28_4425 97269002210c33d07dfd3daa7280bb12 65 SMART SM00357 2 65 1.1E-32 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 MC28_4425 97269002210c33d07dfd3daa7280bb12 65 Gene3D G3DSA:2.40.50.140 1 65 5.9E-31 T 14-10-2018 MC28_4425 97269002210c33d07dfd3daa7280bb12 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 32 - T 14-10-2018 IPR019844 Cold-shock conserved site MC28_4425 97269002210c33d07dfd3daa7280bb12 65 PRINTS PR00050 Cold shock protein signature 23 32 6.9E-20 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_4425 97269002210c33d07dfd3daa7280bb12 65 PRINTS PR00050 Cold shock protein signature 3 18 6.9E-20 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_4425 97269002210c33d07dfd3daa7280bb12 65 PRINTS PR00050 Cold shock protein signature 38 56 6.9E-20 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_4425 97269002210c33d07dfd3daa7280bb12 65 SUPERFAMILY SSF50249 1 64 2.9E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4425 97269002210c33d07dfd3daa7280bb12 65 Pfam PF00313 'Cold-shock' DNA-binding domain 1 64 5.4E-33 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_4425 97269002210c33d07dfd3daa7280bb12 65 PIRSF PIRSF002599 1 65 1.3E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 MC28_4088 4595fe90822f638ba5f7c9fc5a751e7e 260 Pfam PF14042 Domain of unknown function (DUF4247) 17 198 6.1E-35 T 14-10-2018 IPR025341 Protein of unknown function DUF4247 MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 Gene3D G3DSA:3.40.710.10 325 655 2.0E-81 T 14-10-2018 MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 Pfam PF03717 Penicillin-binding Protein dimerisation domain 144 311 5.6E-35 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 Gene3D G3DSA:3.10.450.100 24 132 6.7E-37 T 14-10-2018 MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 Gene3D G3DSA:3.90.1310.10 146 321 2.0E-51 T 14-10-2018 MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 SUPERFAMILY SSF56601 326 654 4.86E-78 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 SUPERFAMILY SSF56519 139 325 7.32E-40 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 Gene3D G3DSA:3.30.1390.30 165 236 2.0E-51 T 14-10-2018 MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 Pfam PF00905 Penicillin binding protein transpeptidase domain 345 653 1.4E-62 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 25 136 2.7E-30 T 14-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 MC28_1706 ad7dc101ce01b1f75a94a5f625897f2e 655 SUPERFAMILY SSF54427 27 135 1.18E-31 T 14-10-2018 IPR032710 NTF2-like domain superfamily MC28_3853 f2c6294f06ff53f6066df6d707107931 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3853 f2c6294f06ff53f6066df6d707107931 66 Gene3D G3DSA:2.40.50.530 1 63 5.2E-22 T 14-10-2018 MC28_3853 f2c6294f06ff53f6066df6d707107931 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 5.1E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MC28_3853 f2c6294f06ff53f6066df6d707107931 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.6E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MC28_3853 f2c6294f06ff53f6066df6d707107931 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.6E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MC28_3853 f2c6294f06ff53f6066df6d707107931 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.6E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MC28_3853 f2c6294f06ff53f6066df6d707107931 66 SUPERFAMILY SSF143034 2 62 3.53E-22 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3853 f2c6294f06ff53f6066df6d707107931 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.829 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MC28_3853 f2c6294f06ff53f6066df6d707107931 66 Pfam PF01632 Ribosomal protein L35 2 62 2.5E-25 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_2871 92bdbdaff62704a067c9e6c584ac3b74 321 Gene3D G3DSA:1.10.443.10 111 316 6.3E-16 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_2871 92bdbdaff62704a067c9e6c584ac3b74 321 SUPERFAMILY SSF47823 15 111 4.12E-5 T 14-10-2018 MC28_2871 92bdbdaff62704a067c9e6c584ac3b74 321 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 11 83 1.2E-6 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_2871 92bdbdaff62704a067c9e6c584ac3b74 321 SUPERFAMILY SSF56349 145 317 1.65E-19 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_2871 92bdbdaff62704a067c9e6c584ac3b74 321 Gene3D G3DSA:1.10.150.130 6 101 4.6E-10 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_2871 92bdbdaff62704a067c9e6c584ac3b74 321 Pfam PF00589 Phage integrase family 151 312 1.0E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_G060 dbe04494622676e636a01c97af133701 114 Gene3D G3DSA:1.10.1200.10 16 106 1.0E-7 T 14-10-2018 IPR036736 ACP-like superfamily MC28_3265 7b8ca17c2fcaff0d9c6c0adee9c09732 70 Gene3D G3DSA:3.10.20.730 1 58 3.8E-26 T 14-10-2018 MC28_3265 7b8ca17c2fcaff0d9c6c0adee9c09732 70 Pfam PF07288 Protein of unknown function (DUF1447) 2 67 6.4E-27 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 MC28_3265 7b8ca17c2fcaff0d9c6c0adee9c09732 70 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 68 5.0E-31 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 MC28_3265 7b8ca17c2fcaff0d9c6c0adee9c09732 70 Hamap MF_01553 UPF0356 protein . 1 69 22.268 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 MC28_3663 0eb2aca2a959ffe0ecec34c92e154648 377 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 376 1.2E-158 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3663 0eb2aca2a959ffe0ecec34c92e154648 377 Gene3D G3DSA:3.90.1150.10 246 377 2.2E-53 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3663 0eb2aca2a959ffe0ecec34c92e154648 377 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3663 0eb2aca2a959ffe0ecec34c92e154648 377 PIRSF PIRSF001434 1 377 2.3E-149 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3663 0eb2aca2a959ffe0ecec34c92e154648 377 Gene3D G3DSA:3.40.640.10 1 245 4.6E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3663 0eb2aca2a959ffe0ecec34c92e154648 377 SUPERFAMILY SSF53383 16 376 9.38E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 321 340 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 Pfam PF04552 Sigma-54, DNA binding domain 274 432 4.9E-62 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 PIRSF PIRSF000774 1 434 8.8E-134 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 Pfam PF04963 Sigma-54 factor, core binding domain 79 261 1.7E-53 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 Gene3D G3DSA:1.10.10.1330 81 203 7.9E-25 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 413 420 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 Gene3D G3DSA:1.10.10.60 373 433 9.3E-24 T 14-10-2018 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 432 9.6E-139 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 PRINTS PR00045 Sigma-54 factor signature 408 426 1.3E-26 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 PRINTS PR00045 Sigma-54 factor signature 333 345 1.3E-26 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 PRINTS PR00045 Sigma-54 factor signature 147 164 1.3E-26 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 PRINTS PR00045 Sigma-54 factor signature 349 360 1.3E-26 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 MC28_4374 5f3c9bbb1a675c7fc89118a6f7538a0a 435 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 49 2.2E-13 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 MC28_2962 0afbe6314b6055657d227e4382d8b13e 385 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 66 372 7.3E-87 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 MC28_2962 0afbe6314b6055657d227e4382d8b13e 385 Gene3D G3DSA:3.40.50.2300 68 331 2.4E-109 T 14-10-2018 MC28_2962 0afbe6314b6055657d227e4382d8b13e 385 Gene3D G3DSA:3.40.50.2300 171 367 2.4E-109 T 14-10-2018 MC28_2962 0afbe6314b6055657d227e4382d8b13e 385 SUPERFAMILY SSF53822 78 301 4.71E-14 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_4834 f03cff1e579f80f50f4ac2bbcef6ffb1 154 ProSitePatterns PS00358 Ribosomal protein L5 signature. 32 48 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4834 f03cff1e579f80f50f4ac2bbcef6ffb1 154 PIRSF PIRSF002161 1 154 3.1E-64 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4834 f03cff1e579f80f50f4ac2bbcef6ffb1 154 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 154 37.247 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4834 f03cff1e579f80f50f4ac2bbcef6ffb1 154 Pfam PF00673 ribosomal L5P family C-terminus 59 152 1.3E-42 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4834 f03cff1e579f80f50f4ac2bbcef6ffb1 154 SUPERFAMILY SSF55282 1 153 4.24E-70 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4834 f03cff1e579f80f50f4ac2bbcef6ffb1 154 Gene3D G3DSA:3.30.1440.10 1 154 9.9E-75 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4834 f03cff1e579f80f50f4ac2bbcef6ffb1 154 Pfam PF00281 Ribosomal protein L5 1 55 1.4E-27 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_5337 605869b686d8a7c6be84f1414f1da6cf 95 Pfam PF12840 Helix-turn-helix domain 17 72 2.6E-10 T 14-10-2018 MC28_5337 605869b686d8a7c6be84f1414f1da6cf 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 7.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_5337 605869b686d8a7c6be84f1414f1da6cf 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 7.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_5337 605869b686d8a7c6be84f1414f1da6cf 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 7.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_5337 605869b686d8a7c6be84f1414f1da6cf 95 Gene3D G3DSA:1.10.10.10 1 94 4.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5337 605869b686d8a7c6be84f1414f1da6cf 95 SUPERFAMILY SSF46785 7 93 8.56E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5337 605869b686d8a7c6be84f1414f1da6cf 95 SMART SM00418 16 95 6.5E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3573 0b9b18d857da16240853384a4b0d4e23 256 SMART SM00382 29 214 9.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3573 0b9b18d857da16240853384a4b0d4e23 256 Pfam PF00005 ABC transporter 20 168 1.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3573 0b9b18d857da16240853384a4b0d4e23 256 SUPERFAMILY SSF52540 2 230 1.41E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3573 0b9b18d857da16240853384a4b0d4e23 256 Gene3D G3DSA:3.40.50.300 1 251 2.8E-65 T 14-10-2018 MC28_3573 0b9b18d857da16240853384a4b0d4e23 256 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 Pfam PF06723 MreB/Mbl protein 4 327 3.7E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 Gene3D G3DSA:3.90.640.10 178 251 2.2E-125 T 14-10-2018 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 Gene3D G3DSA:3.30.420.40 146 309 2.2E-125 T 14-10-2018 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 6.6E-136 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 Gene3D G3DSA:3.30.420.40 6 319 2.2E-125 T 14-10-2018 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 6.6E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 6.6E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 6.6E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 6.6E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 6.6E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 SUPERFAMILY SSF53067 3 140 5.48E-39 T 14-10-2018 MC28_4516 c8094d2c4a3b651699d0f6baa9a0be88 333 SUPERFAMILY SSF53067 143 325 2.07E-46 T 14-10-2018 MC28_1499 0f9616210b6e42671a8e0eadcc8dcf99 268 Pfam PF03837 RecT family 49 239 6.3E-59 T 14-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 MC28_1499 0f9616210b6e42671a8e0eadcc8dcf99 268 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 1 231 1.8E-76 T 14-10-2018 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 MC28_5212 82fb8322e6acdc8482b4ddbb4921af2a 354 SUPERFAMILY SSF55846 34 186 3.7E-33 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_5212 82fb8322e6acdc8482b4ddbb4921af2a 354 Gene3D G3DSA:3.40.80.10 15 200 4.9E-54 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_5212 82fb8322e6acdc8482b4ddbb4921af2a 354 Gene3D G3DSA:2.30.30.40 221 277 6.6E-7 T 14-10-2018 MC28_5212 82fb8322e6acdc8482b4ddbb4921af2a 354 SMART SM00644 34 168 9.2E-23 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_5212 82fb8322e6acdc8482b4ddbb4921af2a 354 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 49 167 5.4E-12 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 390 463 9.6E-13 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 SUPERFAMILY SSF53335 81 462 1.57E-89 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 Gene3D G3DSA:2.40.50.140 9 92 2.8E-21 T 14-10-2018 MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 Gene3D G3DSA:3.40.1350.30 141 296 6.4E-127 T 14-10-2018 MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 395 426 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 29 457 1.6E-188 T 14-10-2018 MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 447 457 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 Gene3D G3DSA:3.40.50.150 94 459 6.4E-127 T 14-10-2018 MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 Pfam PF02475 Met-10+ like-protein 218 367 8.6E-9 T 14-10-2018 IPR030382 SAM-dependent methyltransferase TRM5/TYW2-type Reactome: R-HSA-6782861 MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 SUPERFAMILY SSF50249 9 73 8.57E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_5048 f69e19de08a47d6bfad11d20ae543808 465 Pfam PF01938 TRAM domain 19 72 2.1E-11 T 14-10-2018 IPR002792 TRAM domain MC28_2941 cb03b794fbaf1c684d9661b949160325 509 Pfam PF00919 Uncharacterized protein family UPF0004 67 168 1.8E-30 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 MC28_2941 cb03b794fbaf1c684d9661b949160325 509 SUPERFAMILY SSF102114 198 432 1.2E-63 T 14-10-2018 MC28_2941 cb03b794fbaf1c684d9661b949160325 509 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 67 499 2.4E-161 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 MC28_2941 cb03b794fbaf1c684d9661b949160325 509 Gene3D G3DSA:3.40.50.12160 66 201 1.2E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily MC28_2941 cb03b794fbaf1c684d9661b949160325 509 Pfam PF04055 Radical SAM superfamily 215 386 2.3E-32 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_2941 cb03b794fbaf1c684d9661b949160325 509 Gene3D G3DSA:3.80.30.20 210 443 7.7E-90 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe MC28_2941 cb03b794fbaf1c684d9661b949160325 509 SMART SM00729 211 429 8.9E-64 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_2941 cb03b794fbaf1c684d9661b949160325 509 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 67 502 3.2E-200 T 14-10-2018 MC28_2941 cb03b794fbaf1c684d9661b949160325 509 Pfam PF01938 TRAM domain 441 502 8.8E-14 T 14-10-2018 IPR002792 TRAM domain MC28_2941 cb03b794fbaf1c684d9661b949160325 509 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 215 235 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 MC28_2941 cb03b794fbaf1c684d9661b949160325 509 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 66 503 73.533 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 MC28_2311 2d69b6e04a569a0489c932e19df7f621 236 Gene3D G3DSA:3.40.50.1820 48 213 4.9E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2311 2d69b6e04a569a0489c932e19df7f621 236 SUPERFAMILY SSF53474 55 203 1.61E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2311 2d69b6e04a569a0489c932e19df7f621 236 Pfam PF12695 Alpha/beta hydrolase family 60 222 1.7E-68 T 14-10-2018 IPR029059 Alpha/beta hydrolase fold-5 MC28_0985 c36d9100ef1982554f3ef6ed534f1505 346 Pfam PF12698 ABC-2 family transporter protein 1 337 4.5E-29 T 14-10-2018 MC28_0350 055fbf593e02c44c8edca4f8d73c6a38 263 SUPERFAMILY SSF56112 9 262 1.42E-27 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_0350 055fbf593e02c44c8edca4f8d73c6a38 263 Gene3D G3DSA:3.90.1200.10 65 245 2.3E-10 T 14-10-2018 MC28_0350 055fbf593e02c44c8edca4f8d73c6a38 263 Pfam PF01636 Phosphotransferase enzyme family 119 181 2.2E-11 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_D112 a09694e9a9624ddd914ddb17a9a6e0b7 249 ProDom PD942754 PLASMID TRANSMEMBRANE MEMBRANE PXO2-22/BXB0021/GBAA_PXO2_0021 1 248 1.0E-118 T 14-10-2018 MC28_4965 fbb2f8ffe33f083cbc847fd2271668b5 342 Pfam PF02486 Replication initiation factor 106 300 1.7E-50 T 14-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 MC28_3779 cb8957cb8654812e171c05b44751e641 74 SUPERFAMILY SSF46894 7 72 4.76E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_3779 cb8957cb8654812e171c05b44751e641 74 Gene3D G3DSA:1.10.10.10 1 74 8.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3779 cb8957cb8654812e171c05b44751e641 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_3779 cb8957cb8654812e171c05b44751e641 74 SMART SM00421 9 66 4.9E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_3779 cb8957cb8654812e171c05b44751e641 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 6.3E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_3779 cb8957cb8654812e171c05b44751e641 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 2.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_3779 cb8957cb8654812e171c05b44751e641 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 2.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_3779 cb8957cb8654812e171c05b44751e641 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 2.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_F120 8883819408bedce7480a9c2b5b5f46df 336 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 9 124 1.3E-31 T 14-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 MC28_F120 8883819408bedce7480a9c2b5b5f46df 336 Gene3D G3DSA:3.40.50.510 9 150 2.9E-43 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 MC28_F120 8883819408bedce7480a9c2b5b5f46df 336 SUPERFAMILY SSF52728 173 331 1.44E-53 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 MC28_F120 8883819408bedce7480a9c2b5b5f46df 336 SUPERFAMILY SSF53062 9 135 3.92E-40 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 MC28_F120 8883819408bedce7480a9c2b5b5f46df 336 Pfam PF03830 PTS system sorbose subfamily IIB component 175 320 1.4E-50 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 MC28_F120 8883819408bedce7480a9c2b5b5f46df 336 Gene3D G3DSA:3.40.35.10 170 333 9.5E-52 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 MC28_F120 8883819408bedce7480a9c2b5b5f46df 336 Pfam PF03610 PTS system fructose IIA component 11 126 5.8E-36 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 MC28_0204 f1498f969cb3e4f25369ca20d0bdb952 152 Pfam PF12802 MarR family 31 90 7.9E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0204 f1498f969cb3e4f25369ca20d0bdb952 152 SUPERFAMILY SSF46785 5 139 3.51E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0204 f1498f969cb3e4f25369ca20d0bdb952 152 SMART SM00347 26 126 1.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0204 f1498f969cb3e4f25369ca20d0bdb952 152 Gene3D G3DSA:1.10.10.10 1 144 1.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3954 b5aa59d8f0bcb647aa85cdb90a9edee7 54 Pfam PF13133 Protein of unknown function (DUF3949) 2 51 2.0E-23 T 14-10-2018 IPR025032 Protein of unknown function DUF3949 MC28_1216 571469b324061e9add53062fe79fe7b6 544 Gene3D G3DSA:3.30.2320.10 393 494 3.2E-6 T 14-10-2018 MC28_1216 571469b324061e9add53062fe79fe7b6 544 SUPERFAMILY SSF56563 258 543 1.15E-59 T 14-10-2018 MC28_1216 571469b324061e9add53062fe79fe7b6 544 Pfam PF04586 Caudovirus prohead serine protease 2 146 1.1E-38 T 14-10-2018 IPR006433 Prohead protease MC28_1216 571469b324061e9add53062fe79fe7b6 544 Pfam PF05065 Phage capsid family 264 540 1.5E-52 T 14-10-2018 IPR024455 Phage capsid MC28_1216 571469b324061e9add53062fe79fe7b6 544 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 3 144 1.8E-29 T 14-10-2018 IPR006433 Prohead protease MC28_1216 571469b324061e9add53062fe79fe7b6 544 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 188 540 1.9E-66 T 14-10-2018 IPR024455 Phage capsid MC28_4846 7daf4c47f7f7eb87b15e0b26d32f1de9 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4846 7daf4c47f7f7eb87b15e0b26d32f1de9 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 1.0E-8 T 14-10-2018 MC28_4846 7daf4c47f7f7eb87b15e0b26d32f1de9 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 9.2E-24 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4846 7daf4c47f7f7eb87b15e0b26d32f1de9 37 SUPERFAMILY SSF57840 1 37 6.41E-17 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4846 7daf4c47f7f7eb87b15e0b26d32f1de9 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.778 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4846 7daf4c47f7f7eb87b15e0b26d32f1de9 37 Pfam PF00444 Ribosomal protein L36 1 37 5.7E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 7.8E-9 T 14-10-2018 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 274 7.8E-9 T 14-10-2018 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 7.8E-9 T 14-10-2018 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 7.8E-9 T 14-10-2018 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 274 3.8E-7 T 14-10-2018 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 169 3.8E-7 T 14-10-2018 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.8E-7 T 14-10-2018 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 Gene3D G3DSA:3.50.50.100 1 355 9.9E-79 T 14-10-2018 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 289 3.0E-40 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_4206 871cefb8b653f58fa6a35807e0522c70 356 SUPERFAMILY SSF51905 1 308 1.21E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00365 346 367 430.0 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00365 214 241 630.0 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00365 411 432 17.0 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00365 455 476 47.0 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00365 302 320 92.0 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00365 433 454 22.0 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00365 389 410 28.0 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00365 280 301 0.17 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SUPERFAMILY SSF52058 212 487 1.7E-49 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 Pfam PF12799 Leucine Rich repeats (2 copies) 327 365 1.6E-7 T 14-10-2018 IPR025875 Leucine rich repeat 4 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 Pfam PF12799 Leucine Rich repeats (2 copies) 282 322 1.7E-9 T 14-10-2018 IPR025875 Leucine rich repeat 4 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 Pfam PF12799 Leucine Rich repeats (2 copies) 412 453 2.0E-7 T 14-10-2018 IPR025875 Leucine rich repeat 4 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00725 36 160 8.5E-14 T 14-10-2018 IPR006635 NEAT domain MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 Gene3D G3DSA:2.60.40.1850 34 156 2.1E-37 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 638 668 1.4E-5 T 14-10-2018 MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SUPERFAMILY SSF158911 38 156 1.44E-31 T 14-10-2018 IPR037250 NEAT domain superfamily MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 Pfam PF05031 Iron Transport-associated domain 37 152 2.0E-29 T 14-10-2018 IPR006635 NEAT domain MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 Gene3D G3DSA:3.80.10.10 170 368 2.1E-43 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 Gene3D G3DSA:3.80.10.10 369 498 4.4E-27 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SUPERFAMILY SSF81296 491 564 7.46E-12 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00369 433 454 83.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00369 455 478 89.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00369 411 432 370.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00369 324 348 87.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype MC28_2291 9f0bfacdb7f79fe8ae44a7e9de743db2 670 SMART SM00369 280 303 3.5 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype MC28_0657 2e126b30b2feca6560057706585a3159 47 Pfam PF10055 Uncharacterized small protein (DUF2292) 10 46 5.1E-19 T 14-10-2018 IPR018743 Protein of unknown function DUF2292 MC28_G297 41ba31638cbd4b9365d5455fd38b9cc5 552 SUPERFAMILY SSF52743 179 489 1.02E-40 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_G297 41ba31638cbd4b9365d5455fd38b9cc5 552 Pfam PF00082 Subtilase family 240 481 5.1E-21 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_G297 41ba31638cbd4b9365d5455fd38b9cc5 552 Gene3D G3DSA:3.40.50.200 156 498 7.9E-39 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_G297 41ba31638cbd4b9365d5455fd38b9cc5 552 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 434 444 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_G297 41ba31638cbd4b9365d5455fd38b9cc5 552 PRINTS PR00723 Subtilisin serine protease family (S8) signature 245 258 5.9E-8 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_G297 41ba31638cbd4b9365d5455fd38b9cc5 552 PRINTS PR00723 Subtilisin serine protease family (S8) signature 211 230 5.9E-8 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_G297 41ba31638cbd4b9365d5455fd38b9cc5 552 PRINTS PR00723 Subtilisin serine protease family (S8) signature 433 449 5.9E-8 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_G172 f47e121077923fe2fd0a0adbb0bea126 184 Pfam PF13302 Acetyltransferase (GNAT) domain 14 152 6.2E-29 T 14-10-2018 IPR000182 GNAT domain MC28_G172 f47e121077923fe2fd0a0adbb0bea126 184 SUPERFAMILY SSF55729 7 177 1.48E-43 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_G172 f47e121077923fe2fd0a0adbb0bea126 184 Gene3D G3DSA:3.40.630.30 3 183 1.8E-44 T 14-10-2018 MC28_2409 08331cc6356515aa60d75293cfd44b8a 239 Pfam PF16887 Domain of unknown function (DUF5081) 3 227 1.3E-98 T 14-10-2018 IPR031682 Protein of unknown function DUF5081 MC28_0300 f1a6ae382cbb0890237ce085eb7c66a1 167 Pfam PF03992 Antibiotic biosynthesis monooxygenase 56 129 1.2E-14 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain MC28_0300 f1a6ae382cbb0890237ce085eb7c66a1 167 Gene3D G3DSA:3.30.70.3430 1 167 4.5E-51 T 14-10-2018 MC28_0300 f1a6ae382cbb0890237ce085eb7c66a1 167 SUPERFAMILY SSF54909 56 140 1.82E-24 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 148 4.4E-10 T 14-10-2018 IPR004176 Clp, N-terminal MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.1E-17 T 14-10-2018 IPR004176 Clp, N-terminal MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 SMART SM01086 774 863 3.4E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 SUPERFAMILY SSF52540 160 551 1.42E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Pfam PF07724 AAA domain (Cdc48 subfamily) 602 768 3.9E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 SUPERFAMILY SSF81923 4 158 9.12E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 SMART SM00382 201 347 1.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 SMART SM00382 603 754 4.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 297 309 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 774 854 1.0E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Gene3D G3DSA:3.40.50.300 152 345 7.1E-75 T 14-10-2018 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 670 2.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 714 728 2.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 2.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 607 625 2.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Gene3D G3DSA:1.10.8.60 774 866 4.3E-29 T 14-10-2018 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Gene3D G3DSA:3.40.50.300 346 550 5.2E-71 T 14-10-2018 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 863 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 SUPERFAMILY SSF52540 552 864 1.96E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 637 655 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Gene3D G3DSA:3.40.50.300 556 772 1.8E-88 T 14-10-2018 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Gene3D G3DSA:1.10.1780.10 1 151 8.0E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 MC28_0390 811175af5eb271d9dd872a2bfd903a72 866 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 339 1.1E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_2854 c4a88b5bfc769dce651bff54d1c6246d 322 Pfam PF04230 Polysaccharide pyruvyl transferase 15 271 3.0E-25 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase MC28_0125 6866b7c306af719f18ecb32f9156741c 474 Gene3D G3DSA:1.20.1740.10 1 474 1.6E-64 T 14-10-2018 MC28_0125 6866b7c306af719f18ecb32f9156741c 474 Pfam PF13520 Amino acid permease 7 430 8.8E-54 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_0125 6866b7c306af719f18ecb32f9156741c 474 PIRSF PIRSF006060 1 473 7.1E-56 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_0420 f9a74de8ba0d199b42f8c0455a5541de 132 Pfam PF01152 Bacterial-like globin 9 123 6.9E-34 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 MC28_0420 f9a74de8ba0d199b42f8c0455a5541de 132 SUPERFAMILY SSF46458 7 124 4.86E-40 T 14-10-2018 IPR009050 Globin-like superfamily MC28_0420 f9a74de8ba0d199b42f8c0455a5541de 132 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 53 77 - T 14-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 MC28_0420 f9a74de8ba0d199b42f8c0455a5541de 132 Gene3D G3DSA:1.10.490.10 1 131 9.7E-50 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 MC28_1840 a1ff00c83a6eacc21e50b0d646136769 144 ProSitePatterns PS00761 Signal peptidases I signature 3. 101 114 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 MC28_1840 a1ff00c83a6eacc21e50b0d646136769 144 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 2 138 8.7E-46 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_1840 a1ff00c83a6eacc21e50b0d646136769 144 Gene3D G3DSA:2.10.109.10 26 143 1.4E-34 T 14-10-2018 MC28_1840 a1ff00c83a6eacc21e50b0d646136769 144 ProSitePatterns PS00501 Signal peptidases I serine active site. 4 11 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 MC28_1840 a1ff00c83a6eacc21e50b0d646136769 144 Pfam PF00717 Peptidase S24-like 2 70 1.7E-19 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C MC28_1840 a1ff00c83a6eacc21e50b0d646136769 144 SUPERFAMILY SSF51306 2 143 4.84E-44 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily MC28_1840 a1ff00c83a6eacc21e50b0d646136769 144 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 46 58 7.3E-14 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_1840 a1ff00c83a6eacc21e50b0d646136769 144 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 96 115 7.3E-14 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_1840 a1ff00c83a6eacc21e50b0d646136769 144 ProSitePatterns PS00760 Signal peptidases I lysine active site. 48 60 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 MC28_3008 d60d4380b96c7b365367572a6b1bf59e 180 SUPERFAMILY SSF56349 5 178 3.83E-36 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_3008 d60d4380b96c7b365367572a6b1bf59e 180 Pfam PF00589 Phage integrase family 9 167 1.1E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_3008 d60d4380b96c7b365367572a6b1bf59e 180 Gene3D G3DSA:1.10.443.10 4 180 4.8E-30 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_B04 3ecff67d8f4b385d278c43b7ef47c7a7 60 SUPERFAMILY SSF160059 8 53 3.07E-6 T 14-10-2018 MC28_B04 3ecff67d8f4b385d278c43b7ef47c7a7 60 Pfam PF14553 YqbF, hypothetical protein domain 15 55 1.1E-18 T 14-10-2018 IPR027926 Uncharacterised protein YqbF domain MC28_2367 fd03bc64b2c81f0ae6122c30ea62041d 445 Gene3D G3DSA:3.40.50.12780 9 337 1.3E-44 T 14-10-2018 MC28_2367 fd03bc64b2c81f0ae6122c30ea62041d 445 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 2 441 2.4E-234 T 14-10-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related MC28_F254 ba01406ef300c6f27b41266e2c228b1e 605 TIGRFAM TIGR00815 sulP: sulfate permease 27 557 7.6E-117 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 MC28_F254 ba01406ef300c6f27b41266e2c228b1e 605 Gene3D G3DSA:3.30.750.24 446 571 1.0E-24 T 14-10-2018 IPR036513 STAS domain superfamily MC28_F254 ba01406ef300c6f27b41266e2c228b1e 605 Pfam PF00916 Sulfate permease family 35 399 1.2E-93 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 MC28_F254 ba01406ef300c6f27b41266e2c228b1e 605 SUPERFAMILY SSF52091 456 561 1.96E-18 T 14-10-2018 IPR036513 STAS domain superfamily MC28_F254 ba01406ef300c6f27b41266e2c228b1e 605 Pfam PF01740 STAS domain 459 559 4.8E-17 T 14-10-2018 IPR002645 STAS domain MC28_0154 26cc3c652c92563a05f622a66f6a5018 349 Gene3D G3DSA:2.40.30.40 77 171 4.9E-134 T 14-10-2018 IPR023367 Peptidase M42, domain 2 MC28_0154 26cc3c652c92563a05f622a66f6a5018 349 Gene3D G3DSA:3.40.630.10 14 342 4.9E-134 T 14-10-2018 MC28_0154 26cc3c652c92563a05f622a66f6a5018 349 SUPERFAMILY SSF101821 74 186 1.53E-32 T 14-10-2018 MC28_0154 26cc3c652c92563a05f622a66f6a5018 349 PIRSF PIRSF001123 5 345 2.4E-43 T 14-10-2018 IPR008007 Peptidase M42 MC28_0154 26cc3c652c92563a05f622a66f6a5018 349 SUPERFAMILY SSF53187 6 343 3.03E-56 T 14-10-2018 MC28_0154 26cc3c652c92563a05f622a66f6a5018 349 Pfam PF05343 M42 glutamyl aminopeptidase 49 337 5.2E-91 T 14-10-2018 IPR008007 Peptidase M42 MC28_0827 774935b1589e08cfa6e35b2cc2f17136 277 Gene3D G3DSA:3.40.250.10 1 144 1.5E-44 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0827 774935b1589e08cfa6e35b2cc2f17136 277 SUPERFAMILY SSF52821 147 273 1.06E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0827 774935b1589e08cfa6e35b2cc2f17136 277 Gene3D G3DSA:3.40.250.10 145 277 4.5E-33 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0827 774935b1589e08cfa6e35b2cc2f17136 277 Pfam PF00581 Rhodanese-like domain 155 265 6.0E-15 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0827 774935b1589e08cfa6e35b2cc2f17136 277 Pfam PF00581 Rhodanese-like domain 4 125 1.9E-21 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0827 774935b1589e08cfa6e35b2cc2f17136 277 SMART SM00450 153 270 1.7E-16 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0827 774935b1589e08cfa6e35b2cc2f17136 277 SMART SM00450 3 129 1.9E-20 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0827 774935b1589e08cfa6e35b2cc2f17136 277 SUPERFAMILY SSF52821 2 150 1.03E-39 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_1568 b6836cbee0eb2182518f3487be2f0b7c 1022 Gene3D G3DSA:3.40.50.300 1 312 8.1E-41 T 14-10-2018 MC28_1568 b6836cbee0eb2182518f3487be2f0b7c 1022 Pfam PF13558 Putative exonuclease SbcCD, C subunit 917 978 2.0E-13 T 14-10-2018 MC28_1568 b6836cbee0eb2182518f3487be2f0b7c 1022 SUPERFAMILY SSF52540 19 1005 4.22E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1568 b6836cbee0eb2182518f3487be2f0b7c 1022 Pfam PF13476 AAA domain 3 203 9.0E-30 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain MC28_1568 b6836cbee0eb2182518f3487be2f0b7c 1022 Gene3D G3DSA:3.40.50.300 796 1021 9.0E-28 T 14-10-2018 MC28_1408 7077cc5b7eab46e518bcaeecd4ce982f 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 120 8.1E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_1408 7077cc5b7eab46e518bcaeecd4ce982f 128 Gene3D G3DSA:3.10.180.10 2 125 1.0E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1408 7077cc5b7eab46e518bcaeecd4ce982f 128 SUPERFAMILY SSF54593 7 124 4.13E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0654 c0a2e40b93bacb11217b50406f3eaad3 628 SUPERFAMILY SSF53649 242 615 1.36E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_0654 c0a2e40b93bacb11217b50406f3eaad3 628 Gene3D G3DSA:3.40.720.10 236 543 1.5E-75 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_0654 c0a2e40b93bacb11217b50406f3eaad3 628 Pfam PF00884 Sulfatase 244 533 2.7E-36 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 MC28_0654 c0a2e40b93bacb11217b50406f3eaad3 628 PIRSF PIRSF005091 1 616 3.8E-174 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like MC28_4852 df732c09509c46fbf4f30540e815749a 293 Pfam PF00005 ABC transporter 24 174 8.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4852 df732c09509c46fbf4f30540e815749a 293 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4852 df732c09509c46fbf4f30540e815749a 293 SMART SM00382 32 223 8.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4852 df732c09509c46fbf4f30540e815749a 293 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 280 8.2E-122 T 14-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 MC28_4852 df732c09509c46fbf4f30540e815749a 293 Gene3D G3DSA:3.40.50.300 2 287 1.3E-75 T 14-10-2018 MC28_4852 df732c09509c46fbf4f30540e815749a 293 SUPERFAMILY SSF52540 5 236 5.12E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4383 0c3d44690d5f2131c6cbb2145fdb1fd9 270 Pfam PF04239 Protein of unknown function (DUF421) 73 187 1.1E-32 T 14-10-2018 IPR007353 Protein of unknown function DUF421 MC28_4383 0c3d44690d5f2131c6cbb2145fdb1fd9 270 Gene3D G3DSA:3.30.240.20 65 138 2.8E-24 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_4383 0c3d44690d5f2131c6cbb2145fdb1fd9 270 Gene3D G3DSA:3.30.240.20 154 212 3.8E-13 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_4383 0c3d44690d5f2131c6cbb2145fdb1fd9 270 Pfam PF07870 Protein of unknown function (DUF1657) 221 264 4.7E-15 T 14-10-2018 IPR012452 Protein of unknown function DUF1657 MC28_5096 53fe531bd71bdefb2945c08062afcaa9 263 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 17 254 3.4E-8 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase MC28_5096 53fe531bd71bdefb2945c08062afcaa9 263 Gene3D G3DSA:3.60.10.10 1 262 1.6E-76 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_5096 53fe531bd71bdefb2945c08062afcaa9 263 SUPERFAMILY SSF56219 1 261 6.02E-36 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_4379 f5ade2bb692a6e66444b5db20e2d10e7 158 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 31 148 1.1E-38 T 14-10-2018 IPR005562 SpoVA MC28_4379 f5ade2bb692a6e66444b5db20e2d10e7 158 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 13 152 1.1E-64 T 14-10-2018 IPR014203 Sporulation stage V, protein AC MC28_1424 103b70a48364c04d99f44dcd6bf089b3 154 SUPERFAMILY SSF49764 30 146 6.54E-27 T 14-10-2018 IPR008978 HSP20-like chaperone MC28_1424 103b70a48364c04d99f44dcd6bf089b3 154 Gene3D G3DSA:2.60.40.790 6 152 1.9E-28 T 14-10-2018 IPR008978 HSP20-like chaperone MC28_1424 103b70a48364c04d99f44dcd6bf089b3 154 Pfam PF00011 Hsp20/alpha crystallin family 55 148 7.9E-16 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain MC28_3900 cb4e57b9f1a727892717d083373af25d 377 PIRSF PIRSF000183 1 371 1.2E-191 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 MC28_3900 cb4e57b9f1a727892717d083373af25d 377 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 6.2E-181 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 MC28_3900 cb4e57b9f1a727892717d083373af25d 377 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 MC28_3900 cb4e57b9f1a727892717d083373af25d 377 Gene3D G3DSA:3.40.50.720 129 305 8.8E-141 T 14-10-2018 MC28_3900 cb4e57b9f1a727892717d083373af25d 377 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 6.2E-47 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal MC28_3900 cb4e57b9f1a727892717d083373af25d 377 SMART SM01002 148 297 1.3E-89 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MC28_3900 cb4e57b9f1a727892717d083373af25d 377 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 7.6E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MC28_3900 cb4e57b9f1a727892717d083373af25d 377 SMART SM01003 4 136 4.0E-78 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal MC28_3900 cb4e57b9f1a727892717d083373af25d 377 SUPERFAMILY SSF51735 136 303 3.61E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3900 cb4e57b9f1a727892717d083373af25d 377 SUPERFAMILY SSF52283 1 360 2.3E-68 T 14-10-2018 MC28_3900 cb4e57b9f1a727892717d083373af25d 377 Gene3D G3DSA:3.40.50.720 3 353 8.8E-141 T 14-10-2018 MC28_4877 f980548a818f37dcb0720e39f9979c20 346 Gene3D G3DSA:3.30.70.260 233 336 1.6E-25 T 14-10-2018 MC28_4877 f980548a818f37dcb0720e39f9979c20 346 Pfam PF09383 NIL domain 263 333 1.0E-15 T 14-10-2018 IPR018449 NIL domain MC28_4877 f980548a818f37dcb0720e39f9979c20 346 SUPERFAMILY SSF55021 248 333 3.43E-17 T 14-10-2018 MC28_4877 f980548a818f37dcb0720e39f9979c20 346 SMART SM00930 260 335 3.7E-22 T 14-10-2018 IPR018449 NIL domain MC28_4877 f980548a818f37dcb0720e39f9979c20 346 SUPERFAMILY SSF52540 1 240 1.77E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4877 f980548a818f37dcb0720e39f9979c20 346 Gene3D G3DSA:3.40.50.300 1 232 3.3E-74 T 14-10-2018 MC28_4877 f980548a818f37dcb0720e39f9979c20 346 SMART SM00382 30 218 4.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4877 f980548a818f37dcb0720e39f9979c20 346 Pfam PF00005 ABC transporter 21 169 6.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4877 f980548a818f37dcb0720e39f9979c20 346 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3650 b239bb1081383bc0471066e13a17de4a 285 Gene3D G3DSA:3.10.180.10 166 285 2.4E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3650 b239bb1081383bc0471066e13a17de4a 285 SUPERFAMILY SSF54593 167 279 2.75E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3650 b239bb1081383bc0471066e13a17de4a 285 Gene3D G3DSA:3.10.180.10 11 146 3.9E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3650 b239bb1081383bc0471066e13a17de4a 285 SUPERFAMILY SSF54593 2 156 7.52E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3650 b239bb1081383bc0471066e13a17de4a 285 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 124 1.7E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 Pfam PF07650 KH domain 37 109 1.8E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 Gene3D G3DSA:3.30.300.20 17 106 7.4E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 SMART SM00322 59 124 3.2E-7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 SUPERFAMILY SSF54821 107 205 2.88E-37 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 3.6E-39 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 SUPERFAMILY SSF54814 2 105 1.6E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 Gene3D G3DSA:3.30.1140.32 107 207 2.4E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 2.1E-94 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 MC28_4828 c3d5b5c1a19fbfed677affcc1946120c 219 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.308 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 MC28_F262 7395e5eefa8ab824a421104416e317b0 72 Pfam PF01381 Helix-turn-helix 7 61 3.3E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F262 7395e5eefa8ab824a421104416e317b0 72 Gene3D G3DSA:1.10.260.40 2 67 1.7E-23 T 14-10-2018 MC28_F262 7395e5eefa8ab824a421104416e317b0 72 SUPERFAMILY SSF47413 3 69 1.29E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_F262 7395e5eefa8ab824a421104416e317b0 72 SMART SM00530 6 61 1.0E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3077 d58f8c25545540aa4a794d63497dbc70 219 SUPERFAMILY SSF54637 98 207 5.54E-26 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_3077 d58f8c25545540aa4a794d63497dbc70 219 PIRSF PIRSF037733 23 215 1.6E-84 T 14-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 MC28_3077 d58f8c25545540aa4a794d63497dbc70 219 Gene3D G3DSA:3.10.129.10 92 212 3.5E-40 T 14-10-2018 MC28_3077 d58f8c25545540aa4a794d63497dbc70 219 SUPERFAMILY SSF46785 29 79 8.62E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3077 d58f8c25545540aa4a794d63497dbc70 219 Gene3D G3DSA:1.10.10.10 21 84 4.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3077 d58f8c25545540aa4a794d63497dbc70 219 Hamap MF_01814 Transcription factor FapR [fapR]. 25 212 41.119 T 14-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 MC28_3077 d58f8c25545540aa4a794d63497dbc70 219 Pfam PF03061 Thioesterase superfamily 135 193 4.0E-6 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 MC28_0181 9500e2ee73d97f4a312c79081cefa128 131 Pfam PF00293 NUDIX domain 7 124 6.2E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_0181 9500e2ee73d97f4a312c79081cefa128 131 PRINTS PR00502 NUDIX hydrolase family signature 47 62 9.9E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_0181 9500e2ee73d97f4a312c79081cefa128 131 PRINTS PR00502 NUDIX hydrolase family signature 33 47 9.9E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_0181 9500e2ee73d97f4a312c79081cefa128 131 Gene3D G3DSA:3.90.79.10 1 130 1.4E-36 T 14-10-2018 MC28_0181 9500e2ee73d97f4a312c79081cefa128 131 SUPERFAMILY SSF55811 2 126 4.87E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_3034 59496dd364318576ae2cd25ab20163a7 307 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 237 4.9E-10 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 MC28_3034 59496dd364318576ae2cd25ab20163a7 307 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 178 2.9E-57 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 MC28_3034 59496dd364318576ae2cd25ab20163a7 307 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 216 4.4E-82 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3034 59496dd364318576ae2cd25ab20163a7 307 Gene3D G3DSA:3.30.2350.10 1 244 4.5E-90 T 14-10-2018 MC28_3034 59496dd364318576ae2cd25ab20163a7 307 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 299 19.07 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3034 59496dd364318576ae2cd25ab20163a7 307 SUPERFAMILY SSF55120 1 221 5.76E-79 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_4594 25d0dbf178802cf010130e26f08ba6a3 471 SUPERFAMILY SSF52025 132 238 1.96E-9 T 14-10-2018 MC28_4594 25d0dbf178802cf010130e26f08ba6a3 471 Pfam PF04389 Peptidase family M28 251 451 4.0E-39 T 14-10-2018 IPR007484 Peptidase M28 MC28_4594 25d0dbf178802cf010130e26f08ba6a3 471 Pfam PF02225 PA domain 135 224 3.2E-9 T 14-10-2018 IPR003137 PA domain MC28_4594 25d0dbf178802cf010130e26f08ba6a3 471 Gene3D G3DSA:3.50.30.30 110 241 1.3E-96 T 14-10-2018 MC28_4594 25d0dbf178802cf010130e26f08ba6a3 471 Gene3D G3DSA:3.40.630.10 69 449 1.3E-96 T 14-10-2018 MC28_4594 25d0dbf178802cf010130e26f08ba6a3 471 SUPERFAMILY SSF53187 44 458 1.98E-55 T 14-10-2018 MC28_3503 e1ab3bb6a5116180a03eb4f56b22b498 127 SUPERFAMILY SSF52821 11 121 1.83E-33 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_3503 e1ab3bb6a5116180a03eb4f56b22b498 127 Pfam PF00581 Rhodanese-like domain 43 121 7.8E-19 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_3503 e1ab3bb6a5116180a03eb4f56b22b498 127 SMART SM00450 31 126 2.6E-26 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_3503 e1ab3bb6a5116180a03eb4f56b22b498 127 Gene3D G3DSA:3.40.250.10 32 127 1.7E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0891 9a7ce786847a25d979e80cac258e4bfb 99 Pfam PF02049 Flagellar hook-basal body complex protein FliE 31 99 2.1E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 SUPERFAMILY SSF63882 7 184 1.2E-51 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 Pfam PF03454 MoeA C-terminal region (domain IV) 341 411 4.2E-17 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 176 1.1E-40 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 SUPERFAMILY SSF53218 186 331 1.57E-38 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 Gene3D G3DSA:2.170.190.11 50 150 9.2E-117 T 14-10-2018 MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 5.1E-32 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 Gene3D G3DSA:3.40.980.10 184 336 9.2E-117 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 Pfam PF00994 Probable molybdopterin binding domain 189 325 9.5E-25 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 SUPERFAMILY SSF63867 338 412 3.27E-15 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 SMART SM00852 189 327 1.5E-35 T 14-10-2018 IPR001453 MoaB/Mog domain MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 Gene3D G3DSA:3.90.105.10 26 183 9.2E-117 T 14-10-2018 MC28_1347 adb7463fc9ca61c3c31c0adaec01abc1 429 Gene3D G3DSA:2.40.340.10 337 406 9.2E-117 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_1810 9e4d0c5a50df63c6bfc10d2858031c74 115 TIGRFAM TIGR03601 B_an_ocin: bacteriocin, heterocycloanthracin/sonorensin family 3 97 1.5E-33 T 14-10-2018 IPR019890 Bacteriocin, heterocycloanthracin/sonorensin family MC28_1258 a420b2e66769a74ff7d2be99b9863f2e 200 Pfam PF09335 SNARE associated Golgi protein 30 156 1.3E-24 T 14-10-2018 IPR032816 SNARE associated Golgi protein MC28_1485 b26478343f53a47083c0137fd7c8b024 276 SUPERFAMILY SSF52540 7 271 7.78E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1485 b26478343f53a47083c0137fd7c8b024 276 Gene3D G3DSA:3.40.50.300 1 276 7.3E-59 T 14-10-2018 MC28_1485 b26478343f53a47083c0137fd7c8b024 276 Pfam PF13614 AAA domain 9 195 1.8E-36 T 14-10-2018 IPR025669 AAA domain MC28_5095 091f96f2cd8676700ba602acaafc80d2 572 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 509 526 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_5095 091f96f2cd8676700ba602acaafc80d2 572 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 464 556 2.1E-16 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 MC28_5095 091f96f2cd8676700ba602acaafc80d2 572 Pfam PF00367 phosphotransferase system, EIIB 499 526 4.3E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_5095 091f96f2cd8676700ba602acaafc80d2 572 Gene3D G3DSA:3.30.1360.60 493 572 4.9E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_5095 091f96f2cd8676700ba602acaafc80d2 572 Pfam PF02378 Phosphotransferase system, EIIC 40 404 3.2E-56 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_5095 091f96f2cd8676700ba602acaafc80d2 572 TIGRFAM TIGR02003 PTS-II-BC-unk1: PTS system, IIBC component 29 572 0.0 T 14-10-2018 IPR011300 Phosphotransferase system, IIBC component KEGG: 00010+2.7.1.199|KEGG: 00520+2.7.1.199 MC28_5095 091f96f2cd8676700ba602acaafc80d2 572 SUPERFAMILY SSF55604 496 571 2.22E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_4303 338d1cf5b7daf1bc9ed833082dc579ac 551 Pfam PF00672 HAMP domain 210 242 2.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4303 338d1cf5b7daf1bc9ed833082dc579ac 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 501 3.7E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4303 338d1cf5b7daf1bc9ed833082dc579ac 551 SMART SM00304 191 245 1.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_4303 338d1cf5b7daf1bc9ed833082dc579ac 551 Gene3D G3DSA:1.10.287.950 248 549 7.9E-70 T 14-10-2018 MC28_4303 338d1cf5b7daf1bc9ed833082dc579ac 551 SUPERFAMILY SSF58104 213 549 1.15E-76 T 14-10-2018 MC28_4303 338d1cf5b7daf1bc9ed833082dc579ac 551 SMART SM00283 274 549 3.3E-83 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4303 338d1cf5b7daf1bc9ed833082dc579ac 551 Gene3D G3DSA:1.20.1480.50 150 247 9.4E-13 T 14-10-2018 MC28_3552 9445d0dd941024bce278ce2323444cf0 100 Gene3D G3DSA:1.10.10.10 5 99 5.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3552 9445d0dd941024bce278ce2323444cf0 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 2.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3552 9445d0dd941024bce278ce2323444cf0 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 2.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3552 9445d0dd941024bce278ce2323444cf0 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 2.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3552 9445d0dd941024bce278ce2323444cf0 100 SMART SM00418 21 100 6.4E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3552 9445d0dd941024bce278ce2323444cf0 100 Pfam PF12840 Helix-turn-helix domain 20 79 1.0E-9 T 14-10-2018 MC28_3552 9445d0dd941024bce278ce2323444cf0 100 SUPERFAMILY SSF46785 8 99 1.04E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_E020 d90887aca0a0e68851cfeb85806c39ea 182 SUPERFAMILY SSF47413 9 82 3.49E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_E020 d90887aca0a0e68851cfeb85806c39ea 182 Pfam PF12844 Helix-turn-helix domain 15 78 2.5E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_E020 d90887aca0a0e68851cfeb85806c39ea 182 SMART SM00530 16 77 2.5E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_E020 d90887aca0a0e68851cfeb85806c39ea 182 Gene3D G3DSA:1.10.260.40 10 83 7.2E-18 T 14-10-2018 MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 Pfam PF03466 LysR substrate binding domain 96 296 1.6E-31 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 Gene3D G3DSA:3.40.190.10 167 272 6.9E-53 T 14-10-2018 MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 Gene3D G3DSA:1.10.10.10 8 97 2.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 Gene3D G3DSA:3.40.190.10 98 290 6.9E-53 T 14-10-2018 MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.5E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 SUPERFAMILY SSF46785 8 89 1.82E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1797 7dd19d76c88e6972d87d90e62df5ec30 306 SUPERFAMILY SSF53850 97 296 5.74E-29 T 14-10-2018 MC28_4312 93e39f25988e900c2c108c83b6e3b0a3 477 Pfam PF01235 Sodium:alanine symporter family 56 451 2.8E-158 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4312 93e39f25988e900c2c108c83b6e3b0a3 477 PRINTS PR00175 Sodium/alanine symporter signature 184 202 8.4E-59 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4312 93e39f25988e900c2c108c83b6e3b0a3 477 PRINTS PR00175 Sodium/alanine symporter signature 348 370 8.4E-59 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4312 93e39f25988e900c2c108c83b6e3b0a3 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 8.4E-59 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4312 93e39f25988e900c2c108c83b6e3b0a3 477 PRINTS PR00175 Sodium/alanine symporter signature 94 116 8.4E-59 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4312 93e39f25988e900c2c108c83b6e3b0a3 477 PRINTS PR00175 Sodium/alanine symporter signature 212 231 8.4E-59 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4312 93e39f25988e900c2c108c83b6e3b0a3 477 PRINTS PR00175 Sodium/alanine symporter signature 408 428 8.4E-59 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4312 93e39f25988e900c2c108c83b6e3b0a3 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 439 7.7E-154 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2204 b38bfb4f136a1598a9e1b16c49c6fcbf 458 SUPERFAMILY SSF103473 2 418 3.14E-72 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2204 b38bfb4f136a1598a9e1b16c49c6fcbf 458 Pfam PF07690 Major Facilitator Superfamily 19 355 6.7E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2204 b38bfb4f136a1598a9e1b16c49c6fcbf 458 ProSitePatterns PS00217 Sugar transport proteins signature 2. 111 136 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_2204 b38bfb4f136a1598a9e1b16c49c6fcbf 458 Gene3D G3DSA:1.20.1250.20 1 433 9.6E-70 T 14-10-2018 MC28_4494 4989b6c095aea1da5b124294262807df 326 Gene3D G3DSA:3.90.25.10 170 316 1.8E-134 T 14-10-2018 MC28_4494 4989b6c095aea1da5b124294262807df 326 Gene3D G3DSA:3.40.50.720 1 252 1.8E-134 T 14-10-2018 MC28_4494 4989b6c095aea1da5b124294262807df 326 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 1 323 1.4E-130 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 MC28_4494 4989b6c095aea1da5b124294262807df 326 SUPERFAMILY SSF51735 1 324 1.25E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4494 4989b6c095aea1da5b124294262807df 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 1 249 7.3E-57 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_2249 e076eee3571c26acc28801350e66a938 266 Gene3D G3DSA:3.10.180.10 1 159 5.2E-54 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2249 e076eee3571c26acc28801350e66a938 266 Pfam PF13468 Glyoxalase-like domain 4 193 5.2E-44 T 14-10-2018 IPR025870 Glyoxalase-like domain MC28_2249 e076eee3571c26acc28801350e66a938 266 SUPERFAMILY SSF54593 2 148 7.56E-8 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2249 e076eee3571c26acc28801350e66a938 266 Gene3D G3DSA:3.10.180.10 166 252 8.8E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_5365 db3d45f26b0154ac5f047cc704252a83 323 Pfam PF01636 Phosphotransferase enzyme family 31 253 5.6E-24 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_5365 db3d45f26b0154ac5f047cc704252a83 323 SUPERFAMILY SSF56112 11 312 5.16E-45 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_5365 db3d45f26b0154ac5f047cc704252a83 323 Gene3D G3DSA:3.90.1200.10 124 313 1.1E-20 T 14-10-2018 MC28_0434 9d4dcbac90151b11846d20fb5f0461e9 340 Pfam PF00535 Glycosyl transferase family 2 9 122 8.6E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_0434 9d4dcbac90151b11846d20fb5f0461e9 340 Gene3D G3DSA:3.90.550.10 1 160 7.6E-16 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_0434 9d4dcbac90151b11846d20fb5f0461e9 340 SUPERFAMILY SSF53448 7 134 3.66E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_0434 9d4dcbac90151b11846d20fb5f0461e9 340 Pfam PF13181 Tetratricopeptide repeat 244 270 6.6E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0434 9d4dcbac90151b11846d20fb5f0461e9 340 Pfam PF13176 Tetratricopeptide repeat 210 238 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0434 9d4dcbac90151b11846d20fb5f0461e9 340 Gene3D G3DSA:1.25.40.10 161 240 1.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0434 9d4dcbac90151b11846d20fb5f0461e9 340 Gene3D G3DSA:1.25.40.10 241 339 9.9E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0434 9d4dcbac90151b11846d20fb5f0461e9 340 SUPERFAMILY SSF48452 171 322 4.05E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 227 2.9E-45 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 SUPERFAMILY SSF55174 1 59 6.48E-12 T 14-10-2018 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 Gene3D G3DSA:3.30.70.580 62 230 1.4E-55 T 14-10-2018 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 Gene3D G3DSA:3.30.70.1560 129 212 1.4E-55 T 14-10-2018 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 SMART SM00363 1 59 4.3E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 Pfam PF01479 S4 domain 1 45 3.7E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 SUPERFAMILY SSF55120 46 235 3.42E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 Pfam PF00849 RNA pseudouridylate synthase 62 195 1.8E-18 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_3986 285254c02e3509b6ea4063da2b99067d 242 Gene3D G3DSA:3.10.290.10 1 58 1.1E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_F176 a1af7b41c90e71a5f840290bfcdcd013 386 SUPERFAMILY SSF56349 116 369 1.18E-35 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_F176 a1af7b41c90e71a5f840290bfcdcd013 386 Gene3D G3DSA:1.10.443.10 188 383 7.2E-26 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_F176 a1af7b41c90e71a5f840290bfcdcd013 386 Gene3D G3DSA:1.10.150.130 55 187 1.1E-11 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_F176 a1af7b41c90e71a5f840290bfcdcd013 386 Pfam PF00589 Phage integrase family 194 368 3.3E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_2217 8acbec6b0a890feb8349843135c54048 161 Pfam PF15652 HNH/Endo VII superfamily toxin with a SHH signature 129 158 3.4E-7 T 14-10-2018 IPR028900 Tox-SHH domain MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 487 493 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 Pfam PF00122 E1-E2 ATPase 284 464 3.7E-50 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 SUPERFAMILY SSF55008 85 159 3.93E-12 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 SUPERFAMILY SSF81665 234 778 2.22E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 234 784 8.4E-163 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 SUPERFAMILY SSF55008 6 71 5.89E-12 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 Pfam PF00702 haloacid dehalogenase-like hydrolase 481 693 1.7E-35 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 SUPERFAMILY SSF56784 483 780 1.84E-60 T 14-10-2018 IPR036412 HAD-like superfamily MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 485 499 4.1E-21 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 4.1E-21 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 679 698 4.1E-21 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 703 715 4.1E-21 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 633 4.1E-21 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 Gene3D G3DSA:2.70.150.20 270 387 2.5E-31 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 Gene3D G3DSA:3.40.50.1000 466 732 6.4E-84 T 14-10-2018 IPR023214 HAD superfamily MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 Gene3D G3DSA:3.30.70.100 87 172 9.8E-13 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 Gene3D G3DSA:3.30.70.100 7 86 4.1E-11 T 14-10-2018 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 SUPERFAMILY SSF81653 286 383 3.66E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 Pfam PF00403 Heavy-metal-associated domain 87 148 7.0E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 Pfam PF00403 Heavy-metal-associated domain 10 71 4.0E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 234 782 4.0E-176 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 ProSitePatterns PS01047 Heavy-metal-associated domain. 12 41 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 257 758 2.2E-78 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 Gene3D G3DSA:3.40.1110.10 496 607 6.4E-84 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 ProSitePatterns PS01047 Heavy-metal-associated domain. 90 119 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00941 Cadmium-transporting ATPase signature 349 365 1.4E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00941 Cadmium-transporting ATPase signature 99 120 1.4E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00941 Cadmium-transporting ATPase signature 268 288 1.4E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00941 Cadmium-transporting ATPase signature 368 382 1.4E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_5322 1c0b88ebb299338d6e4178f859ffcce2 788 PRINTS PR00941 Cadmium-transporting ATPase signature 88 97 1.4E-14 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 MC28_2253 90605d4837220f2bc21c00ccb17fda0e 101 SUPERFAMILY SSF89360 1 99 2.35E-6 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 MC28_2253 90605d4837220f2bc21c00ccb17fda0e 101 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 93 1.2E-8 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 MC28_3818 d0c7c6a26be0aecf0bda4c60afcf5a11 230 Gene3D G3DSA:1.10.10.10 131 229 8.8E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3818 d0c7c6a26be0aecf0bda4c60afcf5a11 230 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3818 d0c7c6a26be0aecf0bda4c60afcf5a11 230 Gene3D G3DSA:3.40.50.2300 1 130 9.2E-38 T 14-10-2018 MC28_3818 d0c7c6a26be0aecf0bda4c60afcf5a11 230 SMART SM00862 151 227 8.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3818 d0c7c6a26be0aecf0bda4c60afcf5a11 230 SUPERFAMILY SSF46894 127 228 2.04E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_3818 d0c7c6a26be0aecf0bda4c60afcf5a11 230 SMART SM00448 3 113 3.2E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3818 d0c7c6a26be0aecf0bda4c60afcf5a11 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 4.2E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3818 d0c7c6a26be0aecf0bda4c60afcf5a11 230 SUPERFAMILY SSF52172 2 128 5.41E-40 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0291 2873050d0e0d78b686bef4d4afa3bc6c 88 Pfam PF14206 Cysteine-rich CPCC 3 77 4.9E-34 T 14-10-2018 IPR025983 Cysteine-rich CPCC domain MC28_0744 9ef78c0a5fb71fd4c0c6bf512476a659 90 Gene3D G3DSA:4.10.520.10 1 90 8.2E-42 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_0744 9ef78c0a5fb71fd4c0c6bf512476a659 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.0E-38 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_0744 9ef78c0a5fb71fd4c0c6bf512476a659 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MC28_0744 9ef78c0a5fb71fd4c0c6bf512476a659 90 SMART SM00411 1 90 8.2E-53 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_0744 9ef78c0a5fb71fd4c0c6bf512476a659 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.7E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_0744 9ef78c0a5fb71fd4c0c6bf512476a659 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.7E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_0744 9ef78c0a5fb71fd4c0c6bf512476a659 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.7E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_0744 9ef78c0a5fb71fd4c0c6bf512476a659 90 SUPERFAMILY SSF47729 1 90 4.27E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_4227 71225eb516dbf6d9706c83d418784ae2 323 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 311 8.4E-142 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 MC28_4227 71225eb516dbf6d9706c83d418784ae2 323 Gene3D G3DSA:3.30.540.10 7 311 7.1E-134 T 14-10-2018 MC28_4227 71225eb516dbf6d9706c83d418784ae2 323 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 2 322 2.0E-128 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 MC28_4227 71225eb516dbf6d9706c83d418784ae2 323 SUPERFAMILY SSF56655 2 314 1.47E-105 T 14-10-2018 MC28_4227 71225eb516dbf6d9706c83d418784ae2 323 Gene3D G3DSA:3.40.190.90 122 284 7.1E-134 T 14-10-2018 MC28_4227 71225eb516dbf6d9706c83d418784ae2 323 PIRSF PIRSF004532 1 322 6.3E-150 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 Gene3D G3DSA:3.10.50.10 320 375 6.2E-74 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 Gene3D G3DSA:3.90.550.10 737 970 9.1E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 Pfam PF13641 Glycosyltransferase like family 2 759 981 2.0E-36 T 14-10-2018 MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 Gene3D G3DSA:3.20.20.370 470 690 1.9E-67 T 14-10-2018 MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 SUPERFAMILY SSF88713 470 683 9.64E-56 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 SMART SM00636 112 404 3.4E-10 T 14-10-2018 IPR011583 Chitinase II GO:0008061 MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 Gene3D G3DSA:3.20.20.80 135 409 6.2E-74 T 14-10-2018 MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 Pfam PF01522 Polysaccharide deacetylase 483 590 5.1E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 Pfam PF00704 Glycosyl hydrolases family 18 116 403 2.4E-21 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 SUPERFAMILY SSF53448 755 1022 2.71E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_2574 74fa8ed0e293e28b7db28a54e03d1de6 1120 SUPERFAMILY SSF51445 112 414 9.84E-38 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_4647 34d23e4e7548bd91d10b88ee47a13aa7 351 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 348 1.5E-42 T 14-10-2018 IPR000160 GGDEF domain MC28_4647 34d23e4e7548bd91d10b88ee47a13aa7 351 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 346 3.1E-37 T 14-10-2018 IPR000160 GGDEF domain MC28_4647 34d23e4e7548bd91d10b88ee47a13aa7 351 Gene3D G3DSA:3.30.70.270 179 350 2.4E-47 T 14-10-2018 MC28_4647 34d23e4e7548bd91d10b88ee47a13aa7 351 SUPERFAMILY SSF55073 196 348 5.41E-40 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_4647 34d23e4e7548bd91d10b88ee47a13aa7 351 SMART SM00267 180 350 2.4E-43 T 14-10-2018 IPR000160 GGDEF domain MC28_4647 34d23e4e7548bd91d10b88ee47a13aa7 351 Pfam PF07694 5TMR of 5TMR-LYT 33 150 1.1E-9 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 MC28_1748 ac07dffcd5bdd1837a8a0e377b7c5281 246 SUPERFAMILY SSF53474 6 241 1.72E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1748 ac07dffcd5bdd1837a8a0e377b7c5281 246 Gene3D G3DSA:3.40.50.1820 6 242 1.0E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1748 ac07dffcd5bdd1837a8a0e377b7c5281 246 Pfam PF12146 Serine aminopeptidase, S33 28 125 1.5E-11 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 MC28_F250 ff9511d3699dfe777270c42e05bc1d8d 268 Pfam PF00797 N-acetyltransferase 24 267 1.0E-42 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_F250 ff9511d3699dfe777270c42e05bc1d8d 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 1.5E-12 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_F250 ff9511d3699dfe777270c42e05bc1d8d 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 1.5E-12 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_F250 ff9511d3699dfe777270c42e05bc1d8d 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 103 128 1.5E-12 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_F250 ff9511d3699dfe777270c42e05bc1d8d 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 70 92 1.5E-12 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_F250 ff9511d3699dfe777270c42e05bc1d8d 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 241 262 1.5E-12 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_F250 ff9511d3699dfe777270c42e05bc1d8d 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 262 268 1.5E-12 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_F250 ff9511d3699dfe777270c42e05bc1d8d 268 Gene3D G3DSA:3.30.2140.20 1 268 7.3E-88 T 14-10-2018 MC28_F250 ff9511d3699dfe777270c42e05bc1d8d 268 SUPERFAMILY SSF54001 5 267 2.45E-58 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 Gene3D G3DSA:3.40.1550.10 20 217 2.0E-45 T 14-10-2018 IPR028976 CheC-like superfamily MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 Gene3D G3DSA:3.40.1550.10 240 437 2.6E-45 T 14-10-2018 IPR028976 CheC-like superfamily MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 PRINTS PR00956 Flagellar motor switch protein FliN signature 477 493 1.2E-7 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 PRINTS PR00956 Flagellar motor switch protein FliN signature 510 523 1.2E-7 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 PRINTS PR00956 Flagellar motor switch protein FliN signature 494 510 1.2E-7 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 PRINTS PR00956 Flagellar motor switch protein FliN signature 523 538 1.2E-7 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 SUPERFAMILY SSF101801 475 545 2.22E-15 T 14-10-2018 IPR036429 SpoA-like superfamily MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 SUPERFAMILY SSF103039 240 431 1.57E-45 T 14-10-2018 IPR028976 CheC-like superfamily MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 478 545 5.3E-17 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 SUPERFAMILY SSF103039 20 211 7.46E-46 T 14-10-2018 IPR028976 CheC-like superfamily MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 Gene3D G3DSA:2.30.330.10 465 547 6.5E-18 T 14-10-2018 IPR036429 SpoA-like superfamily MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 Pfam PF04509 CheC-like family 343 378 8.3E-13 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 Pfam PF04509 CheC-like family 245 280 9.4E-11 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 Pfam PF04509 CheC-like family 26 61 7.1E-12 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 MC28_0877 81808104624c3cb973c12ad8b8e035dc 547 Pfam PF04509 CheC-like family 122 158 5.8E-15 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 MC28_5321 4de581b25b2c5cfadf4952f4bfa73200 125 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 64 82 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 MC28_5321 4de581b25b2c5cfadf4952f4bfa73200 125 SUPERFAMILY SSF46785 29 122 5.23E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5321 4de581b25b2c5cfadf4952f4bfa73200 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 1.4E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_5321 4de581b25b2c5cfadf4952f4bfa73200 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 90 105 1.4E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_5321 4de581b25b2c5cfadf4952f4bfa73200 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 73 1.4E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_5321 4de581b25b2c5cfadf4952f4bfa73200 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 75 90 1.4E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_5321 4de581b25b2c5cfadf4952f4bfa73200 125 SMART SM00418 41 119 8.8E-31 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_5321 4de581b25b2c5cfadf4952f4bfa73200 125 Gene3D G3DSA:1.10.10.10 8 125 3.4E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5321 4de581b25b2c5cfadf4952f4bfa73200 125 Pfam PF01022 Bacterial regulatory protein, arsR family 48 93 1.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2402 6de5c2408d629d21916346da74764c33 235 SUPERFAMILY SSF48371 1 235 3.17E-72 T 14-10-2018 IPR016024 Armadillo-type fold MC28_2402 6de5c2408d629d21916346da74764c33 235 Pfam PF08713 DNA alkylation repair enzyme 6 215 1.2E-24 T 14-10-2018 IPR014825 DNA alkylation repair enzyme MC28_5427 b2bdcff55b35581056be79f2def78b96 647 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 502 4.7E-142 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 345 366 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 458 479 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 275 296 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 336 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 408 427 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 163 175 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 380 398 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 121 145 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 195 213 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 94 117 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 224 243 1.5E-98 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 Gene3D G3DSA:1.20.210.10 31 562 1.3E-198 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 277 331 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 SUPERFAMILY SSF81442 45 555 2.62E-175 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_5427 b2bdcff55b35581056be79f2def78b96 647 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 5 645 0.0 T 14-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 MC28_1955 f676cb0434607c57134ecea2ae126b94 81 Pfam PF13122 Protein of unknown function (DUF3977) 1 77 6.9E-46 T 14-10-2018 IPR025009 Protein of unknown function DUF3977 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 285 3.4E-108 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 Gene3D G3DSA:1.10.287.80 6 281 4.9E-102 T 14-10-2018 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 Pfam PF00231 ATP synthase 3 285 1.8E-99 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 PRINTS PR00126 ATP synthase gamma subunit signature 263 284 7.9E-40 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 7.9E-40 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 PRINTS PR00126 ATP synthase gamma subunit signature 232 251 7.9E-40 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 7.9E-40 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 SUPERFAMILY SSF52943 2 285 1.57E-90 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 271 284 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 285 35.93 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4543 a8a49ebcae5cd6fc39db5e21f00b5dc6 286 Gene3D G3DSA:3.40.1380.10 61 204 4.9E-102 T 14-10-2018 MC28_0127 d7f0f801ddeb56b960d1ec145175d579 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 MC28_0127 d7f0f801ddeb56b960d1ec145175d579 479 Gene3D G3DSA:3.40.605.10 23 255 3.7E-159 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_0127 d7f0f801ddeb56b960d1ec145175d579 479 Gene3D G3DSA:3.40.309.10 258 437 3.7E-159 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_0127 d7f0f801ddeb56b960d1ec145175d579 479 SUPERFAMILY SSF53720 5 476 6.81E-151 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_0127 d7f0f801ddeb56b960d1ec145175d579 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 MC28_0127 d7f0f801ddeb56b960d1ec145175d579 479 Pfam PF00171 Aldehyde dehydrogenase family 15 472 5.7E-157 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_1243 0ef329e0fe2901f742dec8b3f6354c63 316 SMART SM00833 221 315 8.1E-6 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MC28_1243 0ef329e0fe2901f742dec8b3f6354c63 316 Gene3D G3DSA:3.30.1220.10 204 316 5.2E-35 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily MC28_1243 0ef329e0fe2901f742dec8b3f6354c63 316 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 183 3.7E-55 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain MC28_1243 0ef329e0fe2901f742dec8b3f6354c63 316 Gene3D G3DSA:3.40.50.300 1 202 1.4E-71 T 14-10-2018 MC28_1243 0ef329e0fe2901f742dec8b3f6354c63 316 SUPERFAMILY SSF52540 2 211 1.99E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1243 0ef329e0fe2901f742dec8b3f6354c63 316 SUPERFAMILY SSF90002 221 315 7.19E-25 T 14-10-2018 MC28_1243 0ef329e0fe2901f742dec8b3f6354c63 316 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 221 315 1.3E-21 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MC28_5079 0782de51cd13222cfc17daa697c0326f 433 Pfam PF07690 Major Facilitator Superfamily 29 306 2.9E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_5079 0782de51cd13222cfc17daa697c0326f 433 SUPERFAMILY SSF103473 10 431 2.22E-81 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_5079 0782de51cd13222cfc17daa697c0326f 433 Gene3D G3DSA:1.20.1250.20 21 432 7.3E-78 T 14-10-2018 MC28_0375 ad2b56a898a8aa0150183295a9d6184e 410 Gene3D G3DSA:1.10.3430.10 1 410 1.8E-152 T 14-10-2018 IPR029020 Ammonium/urea transporter MC28_0375 ad2b56a898a8aa0150183295a9d6184e 410 SUPERFAMILY SSF111352 2 384 3.92E-129 T 14-10-2018 MC28_0375 ad2b56a898a8aa0150183295a9d6184e 410 ProSitePatterns PS01219 Ammonium transporters signature. 160 185 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 MC28_0375 ad2b56a898a8aa0150183295a9d6184e 410 Pfam PF00909 Ammonium Transporter Family 7 403 4.7E-131 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 MC28_0375 ad2b56a898a8aa0150183295a9d6184e 410 TIGRFAM TIGR00836 amt: ammonium transporter 5 403 6.8E-144 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 MC28_4966 8e3d3f15c413e64e87f5b2f496af2ee2 68 Pfam PF11372 Domain of unknown function (DUF3173) 4 60 3.4E-28 T 14-10-2018 IPR021512 Protein of unknown function DUF3173 MC28_D090 749c193d2df4fffae167ce4bf80f0b77 285 SUPERFAMILY SSF52540 4 229 2.06E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_D090 749c193d2df4fffae167ce4bf80f0b77 285 Gene3D G3DSA:3.40.50.300 8 258 2.9E-11 T 14-10-2018 MC28_D090 749c193d2df4fffae167ce4bf80f0b77 285 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 27 81 1.7E-5 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 MC28_E069 b9cac05916d9287cc75ef5148c5853b8 302 Pfam PF00483 Nucleotidyl transferase 6 267 2.1E-34 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 MC28_E069 b9cac05916d9287cc75ef5148c5853b8 302 SUPERFAMILY SSF53448 1 276 4.38E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_E069 b9cac05916d9287cc75ef5148c5853b8 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 266 2.7E-114 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 MC28_E069 b9cac05916d9287cc75ef5148c5853b8 302 Gene3D G3DSA:3.90.550.10 1 294 3.0E-86 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_2500 7e811b8495cbaddd70af09f17106a4a7 126 Pfam PF13411 MerR HTH family regulatory protein 2 60 3.3E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_2500 7e811b8495cbaddd70af09f17106a4a7 126 Gene3D G3DSA:1.10.1660.10 1 121 1.3E-20 T 14-10-2018 MC28_2500 7e811b8495cbaddd70af09f17106a4a7 126 SMART SM00422 1 61 4.6E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_2500 7e811b8495cbaddd70af09f17106a4a7 126 SUPERFAMILY SSF46955 2 99 1.47E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_4575 b3aab540e12bb57a368eb45b2f0b5b33 176 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 15 81 2.0E-10 T 14-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 MC28_4575 b3aab540e12bb57a368eb45b2f0b5b33 176 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 92 2.3E-34 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 MC28_4575 b3aab540e12bb57a368eb45b2f0b5b33 176 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 163 14.831 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 MC28_4575 b3aab540e12bb57a368eb45b2f0b5b33 176 Gene3D G3DSA:1.10.10.1250 2 82 1.2E-33 T 14-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily MC28_2214 0c6115b13914356598b91429e6ff92b0 315 Gene3D G3DSA:1.10.8.300 200 307 1.5E-31 T 14-10-2018 MC28_2214 0c6115b13914356598b91429e6ff92b0 315 PIRSF PIRSF002849 2 312 1.3E-127 T 14-10-2018 MC28_2214 0c6115b13914356598b91429e6ff92b0 315 Gene3D G3DSA:3.40.50.300 20 186 3.0E-45 T 14-10-2018 MC28_2214 0c6115b13914356598b91429e6ff92b0 315 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 39 169 1.5E-60 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 MC28_2214 0c6115b13914356598b91429e6ff92b0 315 SUPERFAMILY SSF52540 3 289 2.35E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5081 0f70afd16fb193502676e8dd2bad7d01 361 Pfam PF00487 Fatty acid desaturase 54 299 1.4E-37 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 MC28_2511 3a25d4037b42fd2d4be01cb25f1e7947 441 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 441 1.8E-137 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_2511 3a25d4037b42fd2d4be01cb25f1e7947 441 PIRSF PIRSF002746 1 441 8.1E-145 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_2511 3a25d4037b42fd2d4be01cb25f1e7947 441 Pfam PF02447 GntP family permease 5 439 3.0E-145 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_1834 ffd7a4b9aafc4beefdd7b252940f9c94 165 SUPERFAMILY SSF46785 4 164 8.25E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1834 ffd7a4b9aafc4beefdd7b252940f9c94 165 Gene3D G3DSA:1.10.10.10 1 98 3.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1834 ffd7a4b9aafc4beefdd7b252940f9c94 165 Pfam PF03551 Transcriptional regulator PadR-like family 7 77 1.8E-18 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_2855 19dd6e1e1dbe185d11dee93b4ded10a3 402 Gene3D G3DSA:3.40.50.2000 223 389 6.4E-33 T 14-10-2018 MC28_2855 19dd6e1e1dbe185d11dee93b4ded10a3 402 Pfam PF00534 Glycosyl transferases group 1 223 381 5.3E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_2855 19dd6e1e1dbe185d11dee93b4ded10a3 402 SUPERFAMILY SSF53756 5 383 5.38E-48 T 14-10-2018 MC28_1545 f94484efdc467e69b88497633f24c463 293 SUPERFAMILY SSF109998 57 172 8.24E-12 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily MC28_1545 f94484efdc467e69b88497633f24c463 293 Pfam PF13616 PPIC-type PPIASE domain 141 234 3.4E-28 T 14-10-2018 MC28_1545 f94484efdc467e69b88497633f24c463 293 Gene3D G3DSA:3.10.50.40 134 265 6.8E-36 T 14-10-2018 MC28_1545 f94484efdc467e69b88497633f24c463 293 Hamap MF_01145 Foldase protein PrsA [prsA]. 14 291 21.697 T 14-10-2018 IPR023059 Foldase protein PrsA GO:0003755 MC28_1545 f94484efdc467e69b88497633f24c463 293 SUPERFAMILY SSF54534 135 232 8.5E-32 T 14-10-2018 MC28_G043 3f247232573d39e876db564f4916a1d8 349 SUPERFAMILY SSF51569 3 304 3.54E-92 T 14-10-2018 MC28_G043 3f247232573d39e876db564f4916a1d8 349 SUPERFAMILY SSF51269 288 349 4.4E-20 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 MC28_G043 3f247232573d39e876db564f4916a1d8 349 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 16 344 5.5E-152 T 14-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 MC28_G043 3f247232573d39e876db564f4916a1d8 349 Pfam PF08666 SAF domain 293 348 2.6E-13 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 MC28_G043 3f247232573d39e876db564f4916a1d8 349 SMART SM00858 292 349 8.6E-10 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 MC28_G043 3f247232573d39e876db564f4916a1d8 349 Gene3D G3DSA:3.90.1210.10 282 349 3.7E-23 T 14-10-2018 MC28_G043 3f247232573d39e876db564f4916a1d8 349 Pfam PF03102 NeuB family 37 277 1.7E-87 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 MC28_G043 3f247232573d39e876db564f4916a1d8 349 Gene3D G3DSA:3.20.20.70 3 277 2.5E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 PRINTS PR00974 Ribosomal protein S18 family signature 64 74 6.7E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 PRINTS PR00974 Ribosomal protein S18 family signature 32 42 6.7E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 PRINTS PR00974 Ribosomal protein S18 family signature 50 64 6.7E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 PRINTS PR00974 Ribosomal protein S18 family signature 42 49 6.7E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 77 22.752 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 75 7.1E-37 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 Gene3D G3DSA:4.10.640.10 2 77 1.5E-31 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 Pfam PF01084 Ribosomal protein S18 23 72 1.4E-28 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 SUPERFAMILY SSF46911 5 75 7.59E-31 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 77 9.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4704 57c05a7bc3bd3c4dbcb0f11f420a63d6 77 ProSitePatterns PS00057 Ribosomal protein S18 signature. 25 48 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_F010 0faf6870cfd910b19ae7b1fc60435415 375 Gene3D G3DSA:3.90.1720.10 245 375 6.3E-29 T 14-10-2018 MC28_F010 0faf6870cfd910b19ae7b1fc60435415 375 Pfam PF13702 Lysozyme-like 61 227 5.7E-47 T 14-10-2018 MC28_F010 0faf6870cfd910b19ae7b1fc60435415 375 Pfam PF00877 NlpC/P60 family 262 372 8.3E-21 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_F010 0faf6870cfd910b19ae7b1fc60435415 375 SUPERFAMILY SSF54001 244 374 2.26E-27 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_F010 0faf6870cfd910b19ae7b1fc60435415 375 SUPERFAMILY SSF53955 67 177 1.04E-10 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_F010 0faf6870cfd910b19ae7b1fc60435415 375 Gene3D G3DSA:1.10.530.10 58 227 1.6E-53 T 14-10-2018 MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 Gene3D G3DSA:3.90.226.10 28 282 3.2E-88 T 14-10-2018 MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 Pfam PF01039 Carboxyl transferase domain 62 241 4.3E-21 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 281 38.957 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 SUPERFAMILY SSF52096 29 281 1.72E-83 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_3879 1b76d68f1a1776ce9b4be4f7ce7691e7 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 16 280 4.9E-130 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 MC28_4129 bd8615b8fd5b2d623132dbedae18a8ba 250 SUPERFAMILY SSF52540 4 224 4.28E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4129 bd8615b8fd5b2d623132dbedae18a8ba 250 Pfam PF00005 ABC transporter 23 171 1.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4129 bd8615b8fd5b2d623132dbedae18a8ba 250 SMART SM00382 32 220 6.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4129 bd8615b8fd5b2d623132dbedae18a8ba 250 Gene3D G3DSA:3.40.50.300 1 240 1.9E-66 T 14-10-2018 MC28_3723 165212d3a7a1e8be3dad72c3dd34527f 180 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 85 179 8.0E-51 T 14-10-2018 IPR004173 3H domain GO:0036094 MC28_3723 165212d3a7a1e8be3dad72c3dd34527f 180 PIRSF PIRSF037847 9 180 8.9E-68 T 14-10-2018 IPR026043 Transcription repressor NadR MC28_3723 165212d3a7a1e8be3dad72c3dd34527f 180 Gene3D G3DSA:1.10.10.10 1 69 2.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3723 165212d3a7a1e8be3dad72c3dd34527f 180 SUPERFAMILY SSF46785 10 69 3.76E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3723 165212d3a7a1e8be3dad72c3dd34527f 180 SUPERFAMILY SSF75500 77 179 5.75E-38 T 14-10-2018 IPR035922 3H domain superfamily MC28_3723 165212d3a7a1e8be3dad72c3dd34527f 180 Pfam PF08279 HTH domain 14 66 2.4E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 MC28_3723 165212d3a7a1e8be3dad72c3dd34527f 180 Pfam PF02829 3H domain 82 178 5.4E-36 T 14-10-2018 IPR004173 3H domain GO:0036094 MC28_3723 165212d3a7a1e8be3dad72c3dd34527f 180 Gene3D G3DSA:3.30.1340.20 75 180 9.8E-38 T 14-10-2018 IPR035922 3H domain superfamily MC28_0800 fe3e863c902f104f6d5cfde45670287f 57 Gene3D G3DSA:1.10.260.40 7 56 1.8E-7 T 14-10-2018 MC28_0800 fe3e863c902f104f6d5cfde45670287f 57 Pfam PF01381 Helix-turn-helix 11 39 2.0E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0800 fe3e863c902f104f6d5cfde45670287f 57 SUPERFAMILY SSF47413 9 53 3.58E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_1608 7aa788cbd76303701eb7cac1d583971e 460 SUPERFAMILY SSF58100 41 286 5.49E-44 T 14-10-2018 MC28_1608 7aa788cbd76303701eb7cac1d583971e 460 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 57 227 8.3E-51 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_1608 7aa788cbd76303701eb7cac1d583971e 460 Gene3D G3DSA:1.20.1170.10 60 342 4.9E-70 T 14-10-2018 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 Gene3D G3DSA:2.40.37.10 11 373 3.6E-135 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 SUPERFAMILY SSF51419 14 250 1.89E-63 T 14-10-2018 IPR029066 PLP-binding barrel MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 Pfam PF00842 Alanine racemase, C-terminal domain 249 372 1.5E-40 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 SMART SM01005 249 374 1.1E-66 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 Hamap MF_01201 Alanine racemase. 7 374 34.301 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 Gene3D G3DSA:3.20.20.10 16 229 3.6E-135 T 14-10-2018 IPR029066 PLP-binding barrel MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 Pfam PF01168 Alanine racemase, N-terminal domain 14 234 1.6E-65 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 SUPERFAMILY SSF50621 244 385 5.23E-49 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 PRINTS PR00992 Alanine racemase signature 33 49 2.0E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 PRINTS PR00992 Alanine racemase signature 69 87 2.0E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 PRINTS PR00992 Alanine racemase signature 356 369 2.0E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 PRINTS PR00992 Alanine racemase signature 207 234 2.0E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 PRINTS PR00992 Alanine racemase signature 302 319 2.0E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 PRINTS PR00992 Alanine racemase signature 164 175 2.0E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 PRINTS PR00992 Alanine racemase signature 282 297 2.0E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 PRINTS PR00992 Alanine racemase signature 265 280 2.0E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 PRINTS PR00992 Alanine racemase signature 129 141 2.0E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_4941 bd9a70646bc9334f7b1e96f8af29e990 389 TIGRFAM TIGR00492 alr: alanine racemase 8 374 3.5E-117 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_1924 bb9eec8967a68a69b1fecda02e66a5fc 225 Gene3D G3DSA:3.40.50.300 1 224 2.3E-64 T 14-10-2018 MC28_1924 bb9eec8967a68a69b1fecda02e66a5fc 225 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_1924 bb9eec8967a68a69b1fecda02e66a5fc 225 Pfam PF00005 ABC transporter 24 170 2.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1924 bb9eec8967a68a69b1fecda02e66a5fc 225 SUPERFAMILY SSF52540 3 221 1.95E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1924 bb9eec8967a68a69b1fecda02e66a5fc 225 SMART SM00382 33 219 5.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 SMART SM00304 216 268 2.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 Gene3D G3DSA:1.10.8.500 215 266 2.3E-5 T 14-10-2018 MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 SUPERFAMILY SSF58104 236 571 9.94E-73 T 14-10-2018 MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 525 1.0E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 59 74 3.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 3.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 422 3.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 188 6.8E-16 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 Pfam PF00672 HAMP domain 217 264 3.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 Gene3D G3DSA:1.10.287.950 267 572 5.2E-69 T 14-10-2018 MC28_0345 6e995c8b96ffe51ad3c108fbcd0e53e9 575 SMART SM00283 297 572 3.6E-74 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 SUPERFAMILY SSF46689 7 57 1.7E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 Gene3D G3DSA:1.10.10.60 1 59 9.1E-18 T 14-10-2018 MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 SUPERFAMILY SSF46689 59 110 3.27E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 SMART SM00342 23 106 1.7E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 3.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 3.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 Pfam PF12833 Helix-turn-helix domain 30 107 4.2E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 Gene3D G3DSA:2.60.120.260 115 266 6.7E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_4893 4d360194027e2eb9b3a32351e8f29f69 299 Gene3D G3DSA:1.10.10.60 60 113 5.8E-16 T 14-10-2018 MC28_4659 b6ece63d7a438c3a44e2fe345795f2ea 170 Gene3D G3DSA:3.10.129.10 1 164 2.8E-53 T 14-10-2018 MC28_4659 b6ece63d7a438c3a44e2fe345795f2ea 170 Pfam PF03061 Thioesterase superfamily 25 97 2.1E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 MC28_4659 b6ece63d7a438c3a44e2fe345795f2ea 170 SUPERFAMILY SSF54637 1 150 2.55E-42 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_1786 482889204858808fe5e533b4cc6244dc 209 Pfam PF08241 Methyltransferase domain 40 133 3.3E-17 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_1786 482889204858808fe5e533b4cc6244dc 209 SUPERFAMILY SSF53335 2 195 1.61E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1786 482889204858808fe5e533b4cc6244dc 209 Gene3D G3DSA:3.40.50.150 22 208 6.9E-30 T 14-10-2018 MC28_2824 bf757a224ab4b86a10ad804b6ef696d8 583 SMART SM00382 362 554 2.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2824 bf757a224ab4b86a10ad804b6ef696d8 583 Pfam PF00005 ABC transporter 353 501 2.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2824 bf757a224ab4b86a10ad804b6ef696d8 583 Gene3D G3DSA:1.20.1560.10 2 318 2.2E-80 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_2824 bf757a224ab4b86a10ad804b6ef696d8 583 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2824 bf757a224ab4b86a10ad804b6ef696d8 583 SUPERFAMILY SSF90123 7 316 1.96E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_2824 bf757a224ab4b86a10ad804b6ef696d8 583 Pfam PF00664 ABC transporter transmembrane region 19 291 4.9E-50 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 MC28_2824 bf757a224ab4b86a10ad804b6ef696d8 583 Gene3D G3DSA:3.40.50.300 328 579 4.1E-78 T 14-10-2018 MC28_2824 bf757a224ab4b86a10ad804b6ef696d8 583 SUPERFAMILY SSF52540 329 573 8.25E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4359 7c371f18aab291973490f374e0e24a95 225 SMART SM00448 2 112 4.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4359 7c371f18aab291973490f374e0e24a95 225 SMART SM00862 148 223 1.5E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4359 7c371f18aab291973490f374e0e24a95 225 SUPERFAMILY SSF46894 128 224 1.67E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_4359 7c371f18aab291973490f374e0e24a95 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 2.5E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4359 7c371f18aab291973490f374e0e24a95 225 SUPERFAMILY SSF52172 3 127 2.28E-27 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4359 7c371f18aab291973490f374e0e24a95 225 Gene3D G3DSA:3.40.50.2300 1 122 3.7E-29 T 14-10-2018 MC28_4359 7c371f18aab291973490f374e0e24a95 225 Gene3D G3DSA:1.10.10.10 123 225 9.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4359 7c371f18aab291973490f374e0e24a95 225 Pfam PF00072 Response regulator receiver domain 4 113 3.7E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2768 df972f7b43cceb098e99157a57fafe96 412 Gene3D G3DSA:1.20.1250.20 13 392 1.8E-47 T 14-10-2018 MC28_2768 df972f7b43cceb098e99157a57fafe96 412 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_2768 df972f7b43cceb098e99157a57fafe96 412 Pfam PF07690 Major Facilitator Superfamily 15 349 1.4E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2768 df972f7b43cceb098e99157a57fafe96 412 SUPERFAMILY SSF103473 14 391 1.44E-55 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1515 832c81a8cca88f4e690d24430362c5e1 489 Pfam PF03237 Terminase-like family 33 265 3.4E-10 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type MC28_1515 832c81a8cca88f4e690d24430362c5e1 489 Gene3D G3DSA:3.40.50.300 15 255 2.8E-31 T 14-10-2018 MC28_1515 832c81a8cca88f4e690d24430362c5e1 489 Gene3D G3DSA:3.30.420.280 258 457 2.0E-45 T 14-10-2018 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 Gene3D G3DSA:1.10.238.260 273 386 3.5E-37 T 14-10-2018 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 500 40.199 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 2 488 6.2E-206 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 SMART SM00917 362 493 3.4E-31 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 SUPERFAMILY SSF51569 1 284 2.93E-90 T 14-10-2018 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 192 205 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 Pfam PF08502 LeuA allosteric (dimerisation) domain 362 491 3.3E-36 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 Gene3D G3DSA:3.20.20.70 1 269 1.7E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 5 21 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 SUPERFAMILY SSF110921 391 490 1.83E-19 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 Pfam PF00682 HMGL-like 1 266 6.0E-91 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 MC28_0637 75b121831ef234b0f7a4d63a7810b965 500 Gene3D G3DSA:3.30.160.270 387 493 2.7E-10 T 14-10-2018 MC28_2552 3ad74f033d4dd5cc0324e2d2b7cc1d64 390 Gene3D G3DSA:3.40.50.150 112 379 1.2E-99 T 14-10-2018 MC28_2552 3ad74f033d4dd5cc0324e2d2b7cc1d64 390 PIRSF PIRSF003085 4 389 1.9E-131 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 MC28_2552 3ad74f033d4dd5cc0324e2d2b7cc1d64 390 Pfam PF02353 Mycolic acid cyclopropane synthetase 104 371 3.2E-104 T 14-10-2018 MC28_2552 3ad74f033d4dd5cc0324e2d2b7cc1d64 390 SUPERFAMILY SSF53335 4 330 8.92E-80 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_D179 2734d321ad602998a3a2a8351ce8580e 211 Gene3D G3DSA:1.10.1660.10 4 81 7.9E-12 T 14-10-2018 MC28_D179 2734d321ad602998a3a2a8351ce8580e 211 Pfam PF13152 Protein of unknown function (DUF3967) 169 210 7.8E-13 T 14-10-2018 IPR025052 Domain of unknown function DUF3967 MC28_D179 2734d321ad602998a3a2a8351ce8580e 211 SUPERFAMILY SSF46955 8 120 2.15E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_D179 2734d321ad602998a3a2a8351ce8580e 211 Pfam PF13411 MerR HTH family regulatory protein 8 78 3.2E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_2374 7a133e072ed314e8ccd036e7f83660f8 252 Pfam PF06161 Protein of unknown function (DUF975) 149 241 2.1E-24 T 14-10-2018 IPR010380 Protein of unknown function DUF975 MC28_2374 7a133e072ed314e8ccd036e7f83660f8 252 Pfam PF06161 Protein of unknown function (DUF975) 4 158 3.9E-7 T 14-10-2018 IPR010380 Protein of unknown function DUF975 MC28_1529 714d4f1ea4fd6e64d340c1ba95568c11 76 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 1 69 3.0E-30 T 14-10-2018 IPR024405 Prophage protein BhlA/UviB MC28_1529 714d4f1ea4fd6e64d340c1ba95568c11 76 Pfam PF10960 BhlA holin family 1 66 2.5E-12 T 14-10-2018 IPR024405 Prophage protein BhlA/UviB MC28_3614 0014dd8eae092fa29e1ea08305a961cc 336 SUPERFAMILY SSF52540 9 210 5.31E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3614 0014dd8eae092fa29e1ea08305a961cc 336 SUPERFAMILY SSF48019 214 333 1.56E-26 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 MC28_3614 0014dd8eae092fa29e1ea08305a961cc 336 Gene3D G3DSA:1.20.272.10 211 335 1.2E-40 T 14-10-2018 MC28_3614 0014dd8eae092fa29e1ea08305a961cc 336 Gene3D G3DSA:1.10.8.60 141 210 5.9E-10 T 14-10-2018 MC28_3614 0014dd8eae092fa29e1ea08305a961cc 336 Gene3D G3DSA:3.40.50.300 1 140 8.1E-40 T 14-10-2018 MC28_3614 0014dd8eae092fa29e1ea08305a961cc 336 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 14 333 1.3E-100 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 MC28_3614 0014dd8eae092fa29e1ea08305a961cc 336 Pfam PF06144 DNA polymerase III, delta subunit 17 191 1.0E-47 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 SUPERFAMILY SSF52540 304 512 1.57E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 Pfam PF12848 ABC transporter 228 311 1.3E-22 T 14-10-2018 IPR032781 ABC-transporter extension domain MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 Pfam PF00005 ABC transporter 338 466 4.6E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 Gene3D G3DSA:3.40.50.300 285 514 5.0E-43 T 14-10-2018 MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 Pfam PF00005 ABC transporter 20 188 4.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 SUPERFAMILY SSF52540 4 242 2.13E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 SMART SM00382 345 511 2.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 SMART SM00382 28 233 3.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4342 be37d3dbd74eb99c8f126347ed9a3339 515 Gene3D G3DSA:3.40.50.300 4 281 1.1E-61 T 14-10-2018 MC28_2147 2dc9ec95988cc19fef4fc7cdb1871191 179 Pfam PF13523 Acetyltransferase (GNAT) domain 14 157 1.1E-30 T 14-10-2018 MC28_2147 2dc9ec95988cc19fef4fc7cdb1871191 179 Gene3D G3DSA:3.40.630.30 3 178 5.4E-48 T 14-10-2018 MC28_2147 2dc9ec95988cc19fef4fc7cdb1871191 179 SUPERFAMILY SSF55729 3 176 3.84E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_F067 ed490c8de9855928e5f57abbc2c3a0e0 440 Gene3D G3DSA:1.25.40.10 348 440 3.3E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_F067 ed490c8de9855928e5f57abbc2c3a0e0 440 SUPERFAMILY SSF48452 348 408 2.56E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0474 87b42e8e251df0b305a44f1b43ea8ce6 415 Gene3D G3DSA:1.20.58.1690 330 414 1.4E-23 T 14-10-2018 IPR038434 YARHG domain superfamily MC28_0474 87b42e8e251df0b305a44f1b43ea8ce6 415 SMART SM01324 335 414 2.2E-26 T 14-10-2018 IPR025582 YARHG domain MC28_0474 87b42e8e251df0b305a44f1b43ea8ce6 415 Pfam PF13240 zinc-ribbon domain 8 28 1.2E-6 T 14-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 MC28_0474 87b42e8e251df0b305a44f1b43ea8ce6 415 Pfam PF13308 YARHG domain 336 415 1.2E-23 T 14-10-2018 IPR025582 YARHG domain MC28_4230 c51949d5ccaedc9ea9f9005b1bcf5c0c 170 SUPERFAMILY SSF55729 31 161 1.73E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4230 c51949d5ccaedc9ea9f9005b1bcf5c0c 170 Pfam PF00583 Acetyltransferase (GNAT) family 29 139 4.0E-12 T 14-10-2018 IPR000182 GNAT domain MC28_4230 c51949d5ccaedc9ea9f9005b1bcf5c0c 170 Gene3D G3DSA:3.40.630.30 1 168 3.9E-32 T 14-10-2018 MC28_1353 d75e4ef49b152910862092367f1a37cf 236 Gene3D G3DSA:3.40.50.1400 122 234 3.9E-10 T 14-10-2018 MC28_1353 d75e4ef49b152910862092367f1a37cf 236 Gene3D G3DSA:3.40.50.1400 1 121 4.1E-27 T 14-10-2018 MC28_1353 d75e4ef49b152910862092367f1a37cf 236 SUPERFAMILY SSF53800 1 233 1.85E-46 T 14-10-2018 MC28_1353 d75e4ef49b152910862092367f1a37cf 236 Pfam PF01903 CbiX 132 208 1.8E-9 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 MC28_1353 d75e4ef49b152910862092367f1a37cf 236 Pfam PF01903 CbiX 9 113 4.5E-28 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 1.8E-78 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 SUPERFAMILY SSF53850 2 217 1.02E-80 T 14-10-2018 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 PIRSF PIRSF001438 1 309 5.8E-120 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 7.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 7.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 7.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 7.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 7.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 4.7E-110 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 293 2.3E-17 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 Gene3D G3DSA:3.40.190.10 4 209 1.6E-83 T 14-10-2018 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 Gene3D G3DSA:3.40.190.10 101 201 1.6E-83 T 14-10-2018 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 SUPERFAMILY SSF54782 219 302 4.71E-21 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3756 07a560ad4cf8cee8c9139d19db4e0f29 309 Gene3D G3DSA:3.30.160.40 220 303 2.3E-26 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 MC28_3966 16c63ea1fcca39f197d94e2f1f98cda1 137 Gene3D G3DSA:1.10.1660.10 1 134 8.9E-32 T 14-10-2018 MC28_3966 16c63ea1fcca39f197d94e2f1f98cda1 137 SMART SM00422 2 70 8.9E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_3966 16c63ea1fcca39f197d94e2f1f98cda1 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 5.6E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_3966 16c63ea1fcca39f197d94e2f1f98cda1 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 5.6E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_3966 16c63ea1fcca39f197d94e2f1f98cda1 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 5.6E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_3966 16c63ea1fcca39f197d94e2f1f98cda1 137 Pfam PF13411 MerR HTH family regulatory protein 2 66 2.6E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_3966 16c63ea1fcca39f197d94e2f1f98cda1 137 SUPERFAMILY SSF46955 2 122 1.72E-27 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_B23 91bb65329e9edd3efcc85039a819845b 360 Gene3D G3DSA:2.30.30.40 227 283 2.2E-8 T 14-10-2018 MC28_B23 91bb65329e9edd3efcc85039a819845b 360 Gene3D G3DSA:3.40.80.10 31 210 6.1E-53 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_B23 91bb65329e9edd3efcc85039a819845b 360 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 57 175 1.3E-11 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_B23 91bb65329e9edd3efcc85039a819845b 360 SUPERFAMILY SSF55846 41 194 2.34E-32 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_B23 91bb65329e9edd3efcc85039a819845b 360 SMART SM00644 42 176 4.7E-22 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_1341 a0f18fb2bf879a28063ebfe3227842bf 453 Pfam PF13247 4Fe-4S dicluster domain 135 232 2.8E-37 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MC28_1341 a0f18fb2bf879a28063ebfe3227842bf 453 SUPERFAMILY SSF54862 1 451 9.21E-144 T 14-10-2018 MC28_1341 a0f18fb2bf879a28063ebfe3227842bf 453 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 319 398 5.4E-29 T 14-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 MC28_1341 a0f18fb2bf879a28063ebfe3227842bf 453 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 448 2.9E-250 T 14-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 MC28_1341 a0f18fb2bf879a28063ebfe3227842bf 453 Gene3D G3DSA:3.30.70.20 1 264 2.7E-74 T 14-10-2018 MC28_1341 a0f18fb2bf879a28063ebfe3227842bf 453 Gene3D G3DSA:1.10.3650.10 319 397 1.8E-27 T 14-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 MC28_4653 9b56fb09ce0595ba70647c5d44ba138b 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 64 231 5.4E-62 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 MC28_4653 9b56fb09ce0595ba70647c5d44ba138b 246 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 4 246 64.246 T 14-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 MC28_4653 9b56fb09ce0595ba70647c5d44ba138b 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 62 236 1.3E-56 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 MC28_3314 467bb478981d6d02de97f9f3f86d41ce 391 Gene3D G3DSA:3.40.47.10 5 274 1.7E-166 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_3314 467bb478981d6d02de97f9f3f86d41ce 391 SUPERFAMILY SSF53901 3 268 7.89E-85 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_3314 467bb478981d6d02de97f9f3f86d41ce 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 MC28_3314 467bb478981d6d02de97f9f3f86d41ce 391 Gene3D G3DSA:3.40.47.10 126 388 1.7E-166 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_3314 467bb478981d6d02de97f9f3f86d41ce 391 PIRSF PIRSF000429 1 391 1.5E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 MC28_3314 467bb478981d6d02de97f9f3f86d41ce 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 7.2E-47 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 MC28_3314 467bb478981d6d02de97f9f3f86d41ce 391 Pfam PF00108 Thiolase, N-terminal domain 4 261 1.9E-88 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 MC28_3314 467bb478981d6d02de97f9f3f86d41ce 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 2.4E-147 T 14-10-2018 IPR002155 Thiolase GO:0016747 MC28_3314 467bb478981d6d02de97f9f3f86d41ce 391 SUPERFAMILY SSF53901 269 389 5.35E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_5407 9b93a5bbf21b992768f05e7068d8d4f1 270 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 270 17.279 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_5407 9b93a5bbf21b992768f05e7068d8d4f1 270 Pfam PF02673 Bacitracin resistance protein BacA 11 265 4.8E-76 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_0612 54722344ecfc5a968b213551f7d86cf0 143 Pfam PF00258 Flavodoxin 2 133 1.9E-26 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 MC28_0612 54722344ecfc5a968b213551f7d86cf0 143 SUPERFAMILY SSF52218 2 142 1.68E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0612 54722344ecfc5a968b213551f7d86cf0 143 Gene3D G3DSA:3.40.50.360 1 143 2.0E-34 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0612 54722344ecfc5a968b213551f7d86cf0 143 TIGRFAM TIGR01753 flav_short: flavodoxin 1 139 5.8E-45 T 14-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 MC28_1766 ee057401ff4e9a9f0888b157761c0d2e 161 SUPERFAMILY SSF55961 2 154 1.25E-30 T 14-10-2018 MC28_1766 ee057401ff4e9a9f0888b157761c0d2e 161 Gene3D G3DSA:3.30.530.20 1 158 3.0E-34 T 14-10-2018 IPR023393 START-like domain superfamily MC28_1766 ee057401ff4e9a9f0888b157761c0d2e 161 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 22 132 1.1E-8 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like MC28_4724 02508d76e06e28d7dcbaeb55b21e6b33 375 Gene3D G3DSA:1.20.1050.90 119 311 1.5E-113 T 14-10-2018 MC28_4724 02508d76e06e28d7dcbaeb55b21e6b33 375 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 MC28_4724 02508d76e06e28d7dcbaeb55b21e6b33 375 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 2 366 6.4E-132 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 MC28_4724 02508d76e06e28d7dcbaeb55b21e6b33 375 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 MC28_4724 02508d76e06e28d7dcbaeb55b21e6b33 375 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 348 1.6E-20 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal MC28_4724 02508d76e06e28d7dcbaeb55b21e6b33 375 Gene3D G3DSA:3.40.50.300 6 345 1.5E-113 T 14-10-2018 MC28_4724 02508d76e06e28d7dcbaeb55b21e6b33 375 SUPERFAMILY SSF52540 2 352 8.49E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4724 02508d76e06e28d7dcbaeb55b21e6b33 375 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 375 104.883 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 MC28_3452 8d28fc482ddad04b3fc1cb63b1a56be2 327 Gene3D G3DSA:3.40.50.920 193 327 2.0E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_3452 8d28fc482ddad04b3fc1cb63b1a56be2 327 Gene3D G3DSA:3.40.50.970 1 192 6.4E-92 T 14-10-2018 MC28_3452 8d28fc482ddad04b3fc1cb63b1a56be2 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 1.2E-41 T 14-10-2018 IPR033248 Transketolase, C-terminal domain MC28_3452 8d28fc482ddad04b3fc1cb63b1a56be2 327 SUPERFAMILY SSF52922 188 325 7.33E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_3452 8d28fc482ddad04b3fc1cb63b1a56be2 327 SMART SM00861 4 179 1.7E-69 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_3452 8d28fc482ddad04b3fc1cb63b1a56be2 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 6.5E-52 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_3452 8d28fc482ddad04b3fc1cb63b1a56be2 327 SUPERFAMILY SSF52518 2 204 7.5E-74 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_5343 f6dc69c070983120a37778b32fe32732 275 SMART SM00382 31 220 3.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5343 f6dc69c070983120a37778b32fe32732 275 Gene3D G3DSA:3.40.50.300 1 254 1.4E-69 T 14-10-2018 MC28_5343 f6dc69c070983120a37778b32fe32732 275 Pfam PF00005 ABC transporter 23 170 4.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5343 f6dc69c070983120a37778b32fe32732 275 SUPERFAMILY SSF52540 6 234 5.63E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5343 f6dc69c070983120a37778b32fe32732 275 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2954 d5ebca43c4ec5c88e37652cf65bbed93 261 PIRSF PIRSF021288 1 260 1.2E-142 T 14-10-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain MC28_2954 d5ebca43c4ec5c88e37652cf65bbed93 261 Pfam PF11868 Protein of unknown function (DUF3388) 70 259 5.0E-107 T 14-10-2018 IPR024514 Domain of unknown function DUF3388 MC28_2954 d5ebca43c4ec5c88e37652cf65bbed93 261 SUPERFAMILY SSF55021 3 73 4.58E-9 T 14-10-2018 MC28_2954 d5ebca43c4ec5c88e37652cf65bbed93 261 Gene3D G3DSA:3.30.70.260 8 73 2.2E-5 T 14-10-2018 MC28_0694 bc3e2cdc4f5d0bf198c99b812786ef7d 277 Gene3D G3DSA:3.20.20.410 1 275 4.0E-92 T 14-10-2018 IPR036520 UPF0759 superfamily MC28_0694 bc3e2cdc4f5d0bf198c99b812786ef7d 277 SUPERFAMILY SSF117396 2 262 4.05E-82 T 14-10-2018 IPR036520 UPF0759 superfamily MC28_0694 bc3e2cdc4f5d0bf198c99b812786ef7d 277 Pfam PF01904 Protein of unknown function DUF72 15 259 2.5E-59 T 14-10-2018 IPR002763 Protein of unknown function DUF72 MC28_2953 b222bdcc4085cd8384213dd2c5404315 304 Pfam PF13464 Domain of unknown function (DUF4115) 218 279 8.9E-11 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 MC28_2953 b222bdcc4085cd8384213dd2c5404315 304 Pfam PF13413 Helix-turn-helix domain 8 68 1.3E-21 T 14-10-2018 MC28_2953 b222bdcc4085cd8384213dd2c5404315 304 SUPERFAMILY SSF47413 3 72 1.13E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2953 b222bdcc4085cd8384213dd2c5404315 304 Gene3D G3DSA:1.10.260.40 1 104 6.9E-31 T 14-10-2018 MC28_3625 2a1a4dcd324f14ee5e76e5879b12e87e 97 SMART SM01103 2 85 8.9E-42 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 MC28_3625 2a1a4dcd324f14ee5e76e5879b12e87e 97 SUPERFAMILY SSF75471 1 95 1.22E-31 T 14-10-2018 IPR035920 YhbY-like superfamily MC28_3625 2a1a4dcd324f14ee5e76e5879b12e87e 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 97 5.0E-44 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 MC28_3625 2a1a4dcd324f14ee5e76e5879b12e87e 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 97 1.1E-40 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 MC28_3625 2a1a4dcd324f14ee5e76e5879b12e87e 97 Gene3D G3DSA:3.30.110.60 1 97 1.3E-36 T 14-10-2018 IPR035920 YhbY-like superfamily MC28_3625 2a1a4dcd324f14ee5e76e5879b12e87e 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 2.2E-22 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 MC28_2320 053a09409cac2fcee92b24fcdcfb90b7 530 PIRSF PIRSF005690 27 520 5.0E-182 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_2320 053a09409cac2fcee92b24fcdcfb90b7 530 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 42 504 6.8E-194 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_1673 c0ce4ee9e32ce393aa89c0b95f9f5fa6 531 Gene3D G3DSA:3.40.630.30 3 164 1.4E-15 T 14-10-2018 MC28_1673 c0ce4ee9e32ce393aa89c0b95f9f5fa6 531 Pfam PF00266 Aminotransferase class-V 201 479 4.0E-13 T 14-10-2018 IPR000192 Aminotransferase class V domain MC28_1673 c0ce4ee9e32ce393aa89c0b95f9f5fa6 531 SUPERFAMILY SSF55729 5 164 7.7E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1673 c0ce4ee9e32ce393aa89c0b95f9f5fa6 531 Gene3D G3DSA:3.90.1150.10 184 517 3.3E-70 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_1673 c0ce4ee9e32ce393aa89c0b95f9f5fa6 531 Gene3D G3DSA:3.40.640.10 192 424 3.3E-70 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1673 c0ce4ee9e32ce393aa89c0b95f9f5fa6 531 Pfam PF13444 Acetyltransferase (GNAT) domain 20 112 2.4E-8 T 14-10-2018 MC28_1673 c0ce4ee9e32ce393aa89c0b95f9f5fa6 531 SUPERFAMILY SSF53383 184 519 2.46E-50 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_G115 fddf04dc320a321c54cbb77cb714a82c 443 Gene3D G3DSA:1.20.1440.30 176 302 1.6E-148 T 14-10-2018 MC28_G115 fddf04dc320a321c54cbb77cb714a82c 443 PIRSF PIRSF036794 23 443 3.5E-151 T 14-10-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type MC28_G115 fddf04dc320a321c54cbb77cb714a82c 443 SUPERFAMILY SSF159501 41 441 2.2E-113 T 14-10-2018 MC28_G115 fddf04dc320a321c54cbb77cb714a82c 443 Pfam PF05139 Erythromycin esterase 102 435 4.1E-65 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 MC28_G115 fddf04dc320a321c54cbb77cb714a82c 443 Gene3D G3DSA:3.40.1660.10 45 436 1.6E-148 T 14-10-2018 MC28_G115 fddf04dc320a321c54cbb77cb714a82c 443 Gene3D G3DSA:3.30.1870.10 104 175 1.6E-148 T 14-10-2018 MC28_4674 79ba0e5a3fea01745440b46b2d1220fe 246 SMART SM00448 2 113 1.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4674 79ba0e5a3fea01745440b46b2d1220fe 246 Gene3D G3DSA:2.20.25.10 209 246 2.3E-9 T 14-10-2018 MC28_4674 79ba0e5a3fea01745440b46b2d1220fe 246 Pfam PF00072 Response regulator receiver domain 4 113 4.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4674 79ba0e5a3fea01745440b46b2d1220fe 246 Gene3D G3DSA:2.40.50.40 139 208 5.8E-16 T 14-10-2018 MC28_4674 79ba0e5a3fea01745440b46b2d1220fe 246 SUPERFAMILY SSF52172 2 134 9.53E-31 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4674 79ba0e5a3fea01745440b46b2d1220fe 246 SMART SM00850 148 245 3.0E-37 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 MC28_4674 79ba0e5a3fea01745440b46b2d1220fe 246 Pfam PF04397 LytTr DNA-binding domain 149 244 6.7E-32 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 MC28_4674 79ba0e5a3fea01745440b46b2d1220fe 246 Gene3D G3DSA:3.40.50.2300 1 133 1.5E-32 T 14-10-2018 MC28_3887 eddb5e96666bb1b306512600ea4f2bb0 87 Pfam PF13133 Protein of unknown function (DUF3949) 19 78 1.9E-31 T 14-10-2018 IPR025032 Protein of unknown function DUF3949 MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 Pfam PF00155 Aminotransferase class I and II 31 385 6.8E-84 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 SUPERFAMILY SSF53383 1 390 4.92E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 Gene3D G3DSA:3.40.640.10 62 284 3.2E-143 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 1.0E-17 T 14-10-2018 MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 1.0E-17 T 14-10-2018 MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 1.0E-17 T 14-10-2018 MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 92 112 1.0E-17 T 14-10-2018 MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 1.0E-17 T 14-10-2018 MC28_0779 ab83a64b3d353ab653a74ea79ea0186e 395 Gene3D G3DSA:3.90.1150.10 25 385 3.2E-143 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_0912 b509991706f4009f4d3cba1b91b77262 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.5E-13 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 MC28_0912 b509991706f4009f4d3cba1b91b77262 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.5E-13 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 MC28_0912 b509991706f4009f4d3cba1b91b77262 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.5E-13 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 MC28_0912 b509991706f4009f4d3cba1b91b77262 91 Pfam PF01313 Bacterial export proteins, family 3 6 76 1.9E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 MC28_1297 a70d5d8f24ad33f957f3c40fd76062b8 140 Gene3D G3DSA:3.40.630.30 5 140 1.7E-24 T 14-10-2018 MC28_1297 a70d5d8f24ad33f957f3c40fd76062b8 140 Pfam PF00583 Acetyltransferase (GNAT) family 28 129 5.9E-16 T 14-10-2018 IPR000182 GNAT domain MC28_1297 a70d5d8f24ad33f957f3c40fd76062b8 140 SUPERFAMILY SSF55729 7 134 6.0E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_G247 5bdd0ad45fa8968250649dfb0d2f3095 1025 Gene3D G3DSA:3.40.50.300 519 748 1.7E-23 T 14-10-2018 MC28_G247 5bdd0ad45fa8968250649dfb0d2f3095 1025 SUPERFAMILY SSF52540 258 741 7.51E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G247 5bdd0ad45fa8968250649dfb0d2f3095 1025 Pfam PF12696 TraM recognition site of TraD and TraG 607 728 7.0E-11 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site MC28_0809 efbcfa9e6c5006f2c75ce8b1b12ee097 399 Pfam PF06458 MucBP domain 217 279 5.8E-11 T 14-10-2018 IPR009459 MucBP domain MC28_0809 efbcfa9e6c5006f2c75ce8b1b12ee097 399 Gene3D G3DSA:3.10.20.320 212 287 2.4E-19 T 14-10-2018 MC28_F167 260c7b11cb4ec6658f9efe90296bee06 341 Gene3D G3DSA:3.30.300.210 179 340 2.9E-28 T 14-10-2018 IPR038501 Spore germination GerAC superfamily MC28_F167 260c7b11cb4ec6658f9efe90296bee06 341 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 163 337 3.5E-29 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_F167 260c7b11cb4ec6658f9efe90296bee06 341 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 339 3.4E-52 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_4291 587bbc0cbb65d7b41fd98825df17d0ee 235 Pfam PF11368 Protein of unknown function (DUF3169) 43 228 9.4E-14 T 14-10-2018 IPR021509 Protein of unknown function DUF3169 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 SUPERFAMILY SSF56796 455 866 5.1E-126 T 14-10-2018 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 638 666 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 Pfam PF00171 Aldehyde dehydrogenase family 13 408 7.8E-23 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 PIRSF PIRSF000111 1 868 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 Pfam PF00465 Iron-containing alcohol dehydrogenase 464 851 7.8E-121 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 SUPERFAMILY SSF53720 16 460 3.01E-80 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 Gene3D G3DSA:3.40.309.10 227 412 8.7E-183 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 Gene3D G3DSA:1.20.1090.10 651 867 1.9E-71 T 14-10-2018 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 Gene3D G3DSA:3.40.605.10 19 451 8.7E-183 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_3662 06b76c41f6893b3166f7babd41bde771 868 Gene3D G3DSA:3.40.50.1970 457 649 1.1E-64 T 14-10-2018 MC28_2480 c4e160c45d3ea5ec1ab8046e095ef525 149 Pfam PF00293 NUDIX domain 23 143 1.2E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_2480 c4e160c45d3ea5ec1ab8046e095ef525 149 PRINTS PR00502 NUDIX hydrolase family signature 43 57 2.6E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_2480 c4e160c45d3ea5ec1ab8046e095ef525 149 PRINTS PR00502 NUDIX hydrolase family signature 57 72 2.6E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_2480 c4e160c45d3ea5ec1ab8046e095ef525 149 Gene3D G3DSA:3.90.79.10 1 147 2.4E-35 T 14-10-2018 MC28_2480 c4e160c45d3ea5ec1ab8046e095ef525 149 SUPERFAMILY SSF55811 1 145 5.55E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_2480 c4e160c45d3ea5ec1ab8046e095ef525 149 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_0750 79a3e8d8c7a9292ac25423a7d8fb76a4 390 SUPERFAMILY SSF103263 1 388 1.44E-150 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_0750 79a3e8d8c7a9292ac25423a7d8fb76a4 390 Pfam PF01264 Chorismate synthase 1 364 1.0E-125 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_0750 79a3e8d8c7a9292ac25423a7d8fb76a4 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_0750 79a3e8d8c7a9292ac25423a7d8fb76a4 390 PIRSF PIRSF001456 1 385 2.4E-133 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_0750 79a3e8d8c7a9292ac25423a7d8fb76a4 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 369 5.1E-131 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_0750 79a3e8d8c7a9292ac25423a7d8fb76a4 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 37.137 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_0750 79a3e8d8c7a9292ac25423a7d8fb76a4 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_0750 79a3e8d8c7a9292ac25423a7d8fb76a4 390 Gene3D G3DSA:3.60.150.10 1 389 7.2E-157 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_0750 79a3e8d8c7a9292ac25423a7d8fb76a4 390 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 MC28_0736 777d20d1fdadcaf379eb7da277ff7bae 297 Pfam PF14045 YIEGIA protein 8 288 3.5E-124 T 14-10-2018 IPR025918 YIEGIA protein MC28_0736 777d20d1fdadcaf379eb7da277ff7bae 297 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 1 281 6.0E-140 T 14-10-2018 MC28_3943 28607ddc4fe8b0d0a3c408505fa0f5ea 210 Pfam PF00583 Acetyltransferase (GNAT) family 48 118 2.3E-5 T 14-10-2018 IPR000182 GNAT domain MC28_3943 28607ddc4fe8b0d0a3c408505fa0f5ea 210 Gene3D G3DSA:3.40.630.30 2 210 3.3E-86 T 14-10-2018 MC28_3943 28607ddc4fe8b0d0a3c408505fa0f5ea 210 PIRSF PIRSF021278 2 210 1.5E-85 T 14-10-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 MC28_3943 28607ddc4fe8b0d0a3c408505fa0f5ea 210 SUPERFAMILY SSF55729 43 119 4.22E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3960 7d37048fc2b2922d1877d42bfcae414a 179 Pfam PF06103 Bacterial protein of unknown function (DUF948) 16 103 1.6E-27 T 14-10-2018 IPR009293 Uncharacterised protein family UPF0478 MC28_3901 2018f60215b154821555cfb5bad9570e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3901 2018f60215b154821555cfb5bad9570e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3901 2018f60215b154821555cfb5bad9570e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3901 2018f60215b154821555cfb5bad9570e 263 Gene3D G3DSA:3.40.50.720 12 263 4.9E-72 T 14-10-2018 MC28_3901 2018f60215b154821555cfb5bad9570e 263 SUPERFAMILY SSF51735 13 254 1.65E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3901 2018f60215b154821555cfb5bad9570e 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 254 5.4E-50 T 14-10-2018 MC28_3901 2018f60215b154821555cfb5bad9570e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 9.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3901 2018f60215b154821555cfb5bad9570e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 9.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3901 2018f60215b154821555cfb5bad9570e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 9.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3901 2018f60215b154821555cfb5bad9570e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 9.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3901 2018f60215b154821555cfb5bad9570e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 9.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3901 2018f60215b154821555cfb5bad9570e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 9.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_4284 7418c1961ef8d8420d3aa92cf9ffb023 436 Gene3D G3DSA:1.20.1740.10 3 436 2.8E-94 T 14-10-2018 MC28_4284 7418c1961ef8d8420d3aa92cf9ffb023 436 PIRSF PIRSF006060 1 436 1.2E-81 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_4284 7418c1961ef8d8420d3aa92cf9ffb023 436 Pfam PF13520 Amino acid permease 11 406 6.9E-61 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_0773 6746efb42a4d1f505334cfde4302201b 278 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 263 6.3E-118 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 MC28_0773 6746efb42a4d1f505334cfde4302201b 278 Gene3D G3DSA:3.20.20.60 2 273 3.1E-118 T 14-10-2018 MC28_0773 6746efb42a4d1f505334cfde4302201b 278 PIRSF PIRSF000388 1 266 6.9E-110 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 MC28_0773 6746efb42a4d1f505334cfde4302201b 278 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 263 43.312 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 MC28_0773 6746efb42a4d1f505334cfde4302201b 278 SUPERFAMILY SSF51621 3 263 2.12E-108 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 MC28_0773 6746efb42a4d1f505334cfde4302201b 278 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 259 9.1E-113 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 MC28_4304 c1a83c627dc1d1e1d38dcca6001fbc7d 105 Gene3D G3DSA:3.30.300.130 1 105 2.3E-37 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily MC28_4304 c1a83c627dc1d1e1d38dcca6001fbc7d 105 SUPERFAMILY SSF117916 5 102 1.01E-29 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily MC28_4304 c1a83c627dc1d1e1d38dcca6001fbc7d 105 Pfam PF01883 Iron-sulfur cluster assembly protein 8 82 8.2E-18 T 14-10-2018 IPR002744 MIP18 family-like MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 2.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 2.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 2.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 194 7.1E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 SMART SM00448 2 115 1.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 SMART SM00421 137 194 5.1E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 Gene3D G3DSA:3.40.50.12740 2 200 1.2E-58 T 14-10-2018 MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 SUPERFAMILY SSF46894 129 200 4.42E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4588 adbec15db1fc55fd088ccffb090652c3 200 SUPERFAMILY SSF52172 1 128 5.69E-31 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0276 db230fc6b3476ed19c3d2f7a19d8257f 287 SUPERFAMILY SSF54534 129 223 3.79E-33 T 14-10-2018 MC28_0276 db230fc6b3476ed19c3d2f7a19d8257f 287 Hamap MF_01145 Foldase protein PrsA [prsA]. 1 278 23.349 T 14-10-2018 IPR023059 Foldase protein PrsA GO:0003755 MC28_0276 db230fc6b3476ed19c3d2f7a19d8257f 287 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 159 180 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 MC28_0276 db230fc6b3476ed19c3d2f7a19d8257f 287 Gene3D G3DSA:3.10.50.40 125 220 5.4E-39 T 14-10-2018 MC28_0276 db230fc6b3476ed19c3d2f7a19d8257f 287 Gene3D G3DSA:1.10.4030.10 25 121 2.1E-6 T 14-10-2018 MC28_0276 db230fc6b3476ed19c3d2f7a19d8257f 287 SUPERFAMILY SSF109998 34 160 1.0E-19 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily MC28_0276 db230fc6b3476ed19c3d2f7a19d8257f 287 Pfam PF13616 PPIC-type PPIASE domain 128 221 2.1E-28 T 14-10-2018 MC28_1024 f62b1fe43881e55e7bf83bedf5fc1abf 87 SUPERFAMILY SSF46689 1 85 1.16E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1767 d6d729d4736b24ff221a80af54192a8c 1056 Pfam PF00005 ABC transporter 337 488 1.3E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1767 d6d729d4736b24ff221a80af54192a8c 1056 SUPERFAMILY SSF52540 10 299 1.09E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1767 d6d729d4736b24ff221a80af54192a8c 1056 SUPERFAMILY SSF52540 337 534 3.32E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1767 d6d729d4736b24ff221a80af54192a8c 1056 SMART SM00382 343 538 0.2 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1767 d6d729d4736b24ff221a80af54192a8c 1056 SMART SM00382 20 294 0.3 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1767 d6d729d4736b24ff221a80af54192a8c 1056 Gene3D G3DSA:1.20.1580.10 120 150 3.6E-48 T 14-10-2018 MC28_1767 d6d729d4736b24ff221a80af54192a8c 1056 Gene3D G3DSA:3.40.50.300 8 306 3.6E-48 T 14-10-2018 MC28_1767 d6d729d4736b24ff221a80af54192a8c 1056 Gene3D G3DSA:3.40.50.300 325 564 3.0E-33 T 14-10-2018 MC28_1414 63abffa7203426e6201064af4e70dee8 647 Gene3D G3DSA:3.40.710.10 317 647 9.1E-85 T 14-10-2018 MC28_1414 63abffa7203426e6201064af4e70dee8 647 Gene3D G3DSA:3.30.1390.30 157 228 8.9E-52 T 14-10-2018 MC28_1414 63abffa7203426e6201064af4e70dee8 647 Gene3D G3DSA:3.10.450.100 9 124 1.3E-28 T 14-10-2018 MC28_1414 63abffa7203426e6201064af4e70dee8 647 Pfam PF00905 Penicillin binding protein transpeptidase domain 338 645 7.0E-67 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_1414 63abffa7203426e6201064af4e70dee8 647 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 10 128 2.2E-40 T 14-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 MC28_1414 63abffa7203426e6201064af4e70dee8 647 SUPERFAMILY SSF56601 318 646 7.7E-82 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1414 63abffa7203426e6201064af4e70dee8 647 Gene3D G3DSA:3.90.1310.10 136 313 8.9E-52 T 14-10-2018 MC28_1414 63abffa7203426e6201064af4e70dee8 647 SUPERFAMILY SSF56519 130 317 2.49E-43 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_1414 63abffa7203426e6201064af4e70dee8 647 Pfam PF03717 Penicillin-binding Protein dimerisation domain 136 303 3.9E-36 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_1414 63abffa7203426e6201064af4e70dee8 647 SUPERFAMILY SSF54427 13 127 1.66E-33 T 14-10-2018 IPR032710 NTF2-like domain superfamily MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 SMART SM00846 1 148 5.2E-82 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 1 321 2.1E-134 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 142 160 8.6E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 265 280 8.6E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 105 118 8.6E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 225 242 8.6E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 169 185 8.6E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 146 153 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 SUPERFAMILY SSF51735 1 164 3.41E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 Gene3D G3DSA:3.40.50.720 1 324 1.2E-151 T 14-10-2018 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 Gene3D G3DSA:3.30.360.10 147 311 1.2E-151 T 14-10-2018 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 SUPERFAMILY SSF55347 148 310 5.66E-73 T 14-10-2018 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 PIRSF PIRSF000149 1 331 2.0E-136 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 98 2.8E-37 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_3861 3f0c3652c4e19fd14d70e7bba87637c9 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 153 309 8.8E-69 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_1425 fb9f8f8dc0b694c5e301f7a288d382bc 633 Pfam PF00733 Asparagine synthase 241 610 1.2E-113 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 MC28_1425 fb9f8f8dc0b694c5e301f7a288d382bc 633 SUPERFAMILY SSF52402 231 605 1.17E-90 T 14-10-2018 MC28_1425 fb9f8f8dc0b694c5e301f7a288d382bc 633 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 547 8.7E-171 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 MC28_1425 fb9f8f8dc0b694c5e301f7a288d382bc 633 Gene3D G3DSA:3.60.20.10 7 192 1.9E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_1425 fb9f8f8dc0b694c5e301f7a288d382bc 633 SUPERFAMILY SSF56235 1 224 3.52E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_1425 fb9f8f8dc0b694c5e301f7a288d382bc 633 Pfam PF13537 Glutamine amidotransferase domain 51 168 4.1E-46 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain MC28_1425 fb9f8f8dc0b694c5e301f7a288d382bc 633 PIRSF PIRSF001589 1 630 2.7E-197 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 MC28_4633 d1279b1e2936558090a236917b220c8c 299 Pfam PF00005 ABC transporter 15 155 4.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4633 d1279b1e2936558090a236917b220c8c 299 SUPERFAMILY SSF52540 2 216 9.69E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4633 d1279b1e2936558090a236917b220c8c 299 Gene3D G3DSA:3.40.50.300 1 233 1.9E-61 T 14-10-2018 MC28_4633 d1279b1e2936558090a236917b220c8c 299 SMART SM00382 23 212 4.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4633 d1279b1e2936558090a236917b220c8c 299 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3766 d992285de2102f38d7ed0c5eed808cb8 332 Gene3D G3DSA:1.25.40.10 14 213 7.2E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3766 d992285de2102f38d7ed0c5eed808cb8 332 SUPERFAMILY SSF48452 12 114 4.56E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1439 c59afcd0f167b34a2acc325dfd325cb6 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 133 6.6E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_1439 c59afcd0f167b34a2acc325dfd325cb6 345 SMART SM00829 9 335 6.6E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_1439 c59afcd0f167b34a2acc325dfd325cb6 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 MC28_1439 c59afcd0f167b34a2acc325dfd325cb6 345 Gene3D G3DSA:3.40.50.720 148 286 1.5E-113 T 14-10-2018 MC28_1439 c59afcd0f167b34a2acc325dfd325cb6 345 Pfam PF00107 Zinc-binding dehydrogenase 174 297 1.4E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MC28_1439 c59afcd0f167b34a2acc325dfd325cb6 345 SUPERFAMILY SSF50129 1 179 3.5E-48 T 14-10-2018 IPR011032 GroES-like superfamily MC28_1439 c59afcd0f167b34a2acc325dfd325cb6 345 Gene3D G3DSA:3.90.180.10 27 334 1.5E-113 T 14-10-2018 MC28_1439 c59afcd0f167b34a2acc325dfd325cb6 345 SUPERFAMILY SSF51735 137 305 9.8E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0020 59aa03d380a0def7dd16d99683e8683d 205 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 20 203 6.5E-59 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MC28_0020 59aa03d380a0def7dd16d99683e8683d 205 Pfam PF02669 K+-transporting ATPase, c chain 22 201 3.9E-72 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MC28_0020 59aa03d380a0def7dd16d99683e8683d 205 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 17 203 33.192 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MC28_0020 59aa03d380a0def7dd16d99683e8683d 205 PIRSF PIRSF001296 16 205 1.1E-77 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MC28_0745 a17ffa508ef7b694fe10118e1d429fec 189 Gene3D G3DSA:3.30.1130.10 55 189 2.5E-60 T 14-10-2018 MC28_0745 a17ffa508ef7b694fe10118e1d429fec 189 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 MC28_0745 a17ffa508ef7b694fe10118e1d429fec 189 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 41.858 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 MC28_0745 a17ffa508ef7b694fe10118e1d429fec 189 SUPERFAMILY SSF55620 3 187 1.93E-77 T 14-10-2018 MC28_0745 a17ffa508ef7b694fe10118e1d429fec 189 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 MC28_0745 a17ffa508ef7b694fe10118e1d429fec 189 Gene3D G3DSA:1.10.286.10 1 54 1.5E-22 T 14-10-2018 MC28_0745 a17ffa508ef7b694fe10118e1d429fec 189 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 187 1.3E-76 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 MC28_0745 a17ffa508ef7b694fe10118e1d429fec 189 Pfam PF01227 GTP cyclohydrolase I 9 186 1.6E-79 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 MC28_3327 a0eb9fc0b6e69ac509fe03e0676737f3 399 Pfam PF00155 Aminotransferase class I and II 37 387 3.1E-69 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_3327 a0eb9fc0b6e69ac509fe03e0676737f3 399 Gene3D G3DSA:3.40.640.10 48 289 2.4E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3327 a0eb9fc0b6e69ac509fe03e0676737f3 399 Gene3D G3DSA:3.90.1150.10 33 387 2.4E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3327 a0eb9fc0b6e69ac509fe03e0676737f3 399 SUPERFAMILY SSF53383 8 390 6.86E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_4566 a5db914c881657bdcb018040d0820067 358 Gene3D G3DSA:3.30.160.20 212 298 8.3E-96 T 14-10-2018 MC28_4566 a5db914c881657bdcb018040d0820067 358 Gene3D G3DSA:3.30.70.1660 113 343 8.3E-96 T 14-10-2018 MC28_4566 a5db914c881657bdcb018040d0820067 358 Pfam PF00472 RF-1 domain 213 322 3.8E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 MC28_4566 a5db914c881657bdcb018040d0820067 358 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 MC28_4566 a5db914c881657bdcb018040d0820067 358 SMART SM00937 65 180 4.4E-64 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 MC28_4566 a5db914c881657bdcb018040d0820067 358 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 356 5.6E-170 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 MC28_4566 a5db914c881657bdcb018040d0820067 358 Pfam PF03462 PCRF domain 12 205 3.9E-73 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 MC28_4566 a5db914c881657bdcb018040d0820067 358 SUPERFAMILY SSF75620 11 354 5.62E-133 T 14-10-2018 MC28_4566 a5db914c881657bdcb018040d0820067 358 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 4 358 40.531 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 MC28_4566 a5db914c881657bdcb018040d0820067 358 Gene3D G3DSA:1.20.58.410 1 104 6.6E-7 T 14-10-2018 MC28_2026 77b653857138b6f5868618d1564ac9f4 90 Gene3D G3DSA:1.10.10.1100 1 66 8.0E-16 T 14-10-2018 MC28_2026 77b653857138b6f5868618d1564ac9f4 90 Pfam PF04324 BFD-like [2Fe-2S] binding domain 8 59 4.3E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain MC28_5235 6c6d087320b33d732d18d19c082ae237 754 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 16 754 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 MC28_5235 6c6d087320b33d732d18d19c082ae237 754 PIRSF PIRSF000379 13 754 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 MC28_5235 6c6d087320b33d732d18d19c082ae237 754 ProSitePatterns PS00850 Glycine radical domain signature. 724 732 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site MC28_5235 6c6d087320b33d732d18d19c082ae237 754 SUPERFAMILY SSF51998 13 754 1.37E-287 T 14-10-2018 MC28_5235 6c6d087320b33d732d18d19c082ae237 754 Gene3D G3DSA:3.20.70.20 7 754 0.0 T 14-10-2018 MC28_5235 6c6d087320b33d732d18d19c082ae237 754 Pfam PF01228 Glycine radical 629 735 4.1E-44 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 MC28_5235 6c6d087320b33d732d18d19c082ae237 754 Pfam PF02901 Pyruvate formate lyase-like 29 613 1.5E-209 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 MC28_4132 e72a127f711b3fa4fb69cfa30b6bd467 441 PIRSF PIRSF002746 1 441 7.3E-144 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_4132 e72a127f711b3fa4fb69cfa30b6bd467 441 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 440 6.7E-137 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_4132 e72a127f711b3fa4fb69cfa30b6bd467 441 Pfam PF02447 GntP family permease 5 439 1.1E-144 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_1771 7407d2abf6e8ffdfb54d792826c7f571 246 Pfam PF13411 MerR HTH family regulatory protein 3 47 4.6E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_1771 7407d2abf6e8ffdfb54d792826c7f571 246 Gene3D G3DSA:1.10.1660.10 1 89 3.7E-15 T 14-10-2018 MC28_1771 7407d2abf6e8ffdfb54d792826c7f571 246 SUPERFAMILY SSF55136 96 246 3.84E-19 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_1771 7407d2abf6e8ffdfb54d792826c7f571 246 SMART SM00871 95 246 1.1E-25 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding MC28_1771 7407d2abf6e8ffdfb54d792826c7f571 246 SUPERFAMILY SSF46955 2 82 1.79E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_1771 7407d2abf6e8ffdfb54d792826c7f571 246 Pfam PF06445 GyrI-like small molecule binding domain 97 246 4.6E-15 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain MC28_1771 7407d2abf6e8ffdfb54d792826c7f571 246 Gene3D G3DSA:3.20.80.10 90 246 2.3E-24 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_3495 ed60cbc9098b8697efa3dc54bdf13b80 133 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 4 133 4.0E-14 T 14-10-2018 MC28_0150 f928f2bdff4b8599d9e7ca6a0b8553d0 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 262 1.9E-50 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 MC28_0150 f928f2bdff4b8599d9e7ca6a0b8553d0 263 SUPERFAMILY SSF52096 5 262 1.32E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_0150 f928f2bdff4b8599d9e7ca6a0b8553d0 263 Gene3D G3DSA:1.10.12.10 206 263 5.7E-19 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal MC28_0150 f928f2bdff4b8599d9e7ca6a0b8553d0 263 Gene3D G3DSA:3.90.226.10 1 201 4.3E-51 T 14-10-2018 MC28_4112 165018fa29abb6f87d3a121245b764a3 115 Gene3D G3DSA:2.40.50.480 27 114 9.5E-17 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_4112 165018fa29abb6f87d3a121245b764a3 115 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 112 5.7E-12 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_4112 165018fa29abb6f87d3a121245b764a3 115 SUPERFAMILY SSF159121 27 114 1.09E-21 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_4112 165018fa29abb6f87d3a121245b764a3 115 Pfam PF06486 Protein of unknown function (DUF1093) 34 101 8.5E-12 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_2837 c3a9626728397fa922dc9de789b2b24f 180 Pfam PF08006 Protein of unknown function (DUF1700) 1 179 3.8E-72 T 14-10-2018 IPR012963 Protein of unknown function DUF1700 MC28_4561 6ba592d20663e86560fec8729f990d46 171 Pfam PF02659 Putative manganese efflux pump 21 168 1.4E-38 T 14-10-2018 IPR003810 Putative manganese efflux pump MC28_4561 6ba592d20663e86560fec8729f990d46 171 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 171 20.49 T 14-10-2018 IPR022929 Putative manganese efflux pump MntP MC28_3315 903e7b2ce788ea738ed1c86ca014ab3e 161 Pfam PF00293 NUDIX domain 33 154 9.9E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_3315 903e7b2ce788ea738ed1c86ca014ab3e 161 ProSitePatterns PS00893 Nudix box signature. 60 81 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_3315 903e7b2ce788ea738ed1c86ca014ab3e 161 Gene3D G3DSA:3.90.79.10 11 155 1.4E-36 T 14-10-2018 MC28_3315 903e7b2ce788ea738ed1c86ca014ab3e 161 PRINTS PR00502 NUDIX hydrolase family signature 69 84 3.1E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_3315 903e7b2ce788ea738ed1c86ca014ab3e 161 PRINTS PR00502 NUDIX hydrolase family signature 55 69 3.1E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_3315 903e7b2ce788ea738ed1c86ca014ab3e 161 SUPERFAMILY SSF55811 25 151 1.76E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_0097 ee7cf9449afff8a46761e8f1914fd53f 287 SUPERFAMILY SSF46689 5 77 6.81E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_0097 ee7cf9449afff8a46761e8f1914fd53f 287 SUPERFAMILY SSF53697 96 282 1.96E-42 T 14-10-2018 MC28_0097 ee7cf9449afff8a46761e8f1914fd53f 287 Gene3D G3DSA:1.10.10.10 2 79 4.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0097 ee7cf9449afff8a46761e8f1914fd53f 287 Gene3D G3DSA:3.40.50.10490 98 280 4.2E-44 T 14-10-2018 MC28_0097 ee7cf9449afff8a46761e8f1914fd53f 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 77 9.0E-16 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 MC28_0097 ee7cf9449afff8a46761e8f1914fd53f 287 Pfam PF01380 SIS domain 130 259 8.2E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 MC28_4175 479cc0a1cae477bd09fdb1d0ff3848c6 165 SUPERFAMILY SSF49329 16 155 1.57E-39 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 MC28_4175 479cc0a1cae477bd09fdb1d0ff3848c6 165 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 20 155 9.3E-37 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 MC28_4175 479cc0a1cae477bd09fdb1d0ff3848c6 165 Gene3D G3DSA:2.60.40.200 10 161 1.8E-48 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 MC28_4133 7f7901e530caaf1ff472d53159da607f 241 SUPERFAMILY SSF46785 10 81 2.78E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4133 7f7901e530caaf1ff472d53159da607f 241 Pfam PF07702 UTRA domain 99 231 1.4E-21 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_4133 7f7901e530caaf1ff472d53159da607f 241 SMART SM00345 18 77 4.5E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_4133 7f7901e530caaf1ff472d53159da607f 241 SMART SM00866 98 234 3.7E-14 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_4133 7f7901e530caaf1ff472d53159da607f 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_4133 7f7901e530caaf1ff472d53159da607f 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_4133 7f7901e530caaf1ff472d53159da607f 241 SUPERFAMILY SSF64288 65 239 1.24E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_4133 7f7901e530caaf1ff472d53159da607f 241 Gene3D G3DSA:1.10.10.10 1 83 6.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4133 7f7901e530caaf1ff472d53159da607f 241 Gene3D G3DSA:3.40.1410.10 84 239 1.9E-24 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_4133 7f7901e530caaf1ff472d53159da607f 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 6.4E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2425 83929fdd3dc61d178e3b1a863c0cdc27 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 9.9E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2425 83929fdd3dc61d178e3b1a863c0cdc27 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 9.9E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2425 83929fdd3dc61d178e3b1a863c0cdc27 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 9.9E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2425 83929fdd3dc61d178e3b1a863c0cdc27 305 Pfam PF00561 alpha/beta hydrolase fold 35 289 3.8E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2425 83929fdd3dc61d178e3b1a863c0cdc27 305 Gene3D G3DSA:3.40.50.1820 15 305 1.0E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2425 83929fdd3dc61d178e3b1a863c0cdc27 305 SUPERFAMILY SSF53474 8 304 1.93E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3375 9b3d085c6bbc107a0545f56c6662a3e3 223 Gene3D G3DSA:3.30.110.170 25 220 8.7E-50 T 14-10-2018 MC28_3375 9b3d085c6bbc107a0545f56c6662a3e3 223 Gene3D G3DSA:3.30.70.2970 35 141 8.7E-50 T 14-10-2018 MC28_3375 9b3d085c6bbc107a0545f56c6662a3e3 223 Pfam PF04402 Protein of unknown function (DUF541) 23 220 2.2E-37 T 14-10-2018 IPR007497 Protein of unknown function DUF541 MC28_4571 bcfd01041ad85aba8605a903b9aaab82 285 SUPERFAMILY SSF51569 1 285 2.49E-105 T 14-10-2018 MC28_4571 bcfd01041ad85aba8605a903b9aaab82 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 2.3E-113 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MC28_4571 bcfd01041ad85aba8605a903b9aaab82 285 Gene3D G3DSA:3.20.20.70 1 285 9.0E-116 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4571 bcfd01041ad85aba8605a903b9aaab82 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 6.5E-106 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MC28_4571 bcfd01041ad85aba8605a903b9aaab82 285 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 3.5E-129 T 14-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 MC28_4571 bcfd01041ad85aba8605a903b9aaab82 285 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MC28_4571 bcfd01041ad85aba8605a903b9aaab82 285 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MC28_4571 bcfd01041ad85aba8605a903b9aaab82 285 PIRSF PIRSF001359 1 285 2.8E-125 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MC28_1299 35cbf9a398af6831f4d21bfc20a53aab 188 SUPERFAMILY SSF55729 4 177 1.98E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1299 35cbf9a398af6831f4d21bfc20a53aab 188 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 5.6E-21 T 14-10-2018 IPR000182 GNAT domain MC28_1299 35cbf9a398af6831f4d21bfc20a53aab 188 Gene3D G3DSA:3.40.630.30 1 186 1.1E-38 T 14-10-2018 MC28_1181 4c01743fd82977ae51f36cc81d7ff19a 219 SUPERFAMILY SSF140423 21 210 1.57E-56 T 14-10-2018 IPR036785 YkyA-like superfamily MC28_1181 4c01743fd82977ae51f36cc81d7ff19a 219 Gene3D G3DSA:1.20.120.570 13 208 4.1E-37 T 14-10-2018 IPR036785 YkyA-like superfamily MC28_1181 4c01743fd82977ae51f36cc81d7ff19a 219 Pfam PF10368 Putative cell-wall binding lipoprotein 13 212 8.8E-60 T 14-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like MC28_G092 eb363bd0d0b835d690a258e4d7637467 152 Pfam PF00583 Acetyltransferase (GNAT) family 41 137 5.0E-12 T 14-10-2018 IPR000182 GNAT domain MC28_G092 eb363bd0d0b835d690a258e4d7637467 152 SUPERFAMILY SSF55729 7 137 2.66E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_G092 eb363bd0d0b835d690a258e4d7637467 152 Gene3D G3DSA:3.40.630.30 4 148 9.9E-26 T 14-10-2018 MC28_D040 9497d704a613d7a05f33ef224a2ce873 62 ProDom PD266810 PLASMID PXO2-82/BXB0112/GBAA_PXO2_0112 1 61 1.0E-28 T 14-10-2018 IPR020239 Protein of unknown function DUF5511 MC28_D040 9497d704a613d7a05f33ef224a2ce873 62 Pfam PF17630 Family of unknown function (DUF5511) 1 62 3.2E-26 T 14-10-2018 IPR020239 Protein of unknown function DUF5511 MC28_1935 681e5760f7a5058ea716f865ed2d7fa7 305 SUPERFAMILY SSF103481 37 139 7.32E-14 T 14-10-2018 MC28_1935 681e5760f7a5058ea716f865ed2d7fa7 305 SUPERFAMILY SSF103481 186 290 3.79E-16 T 14-10-2018 MC28_1935 681e5760f7a5058ea716f865ed2d7fa7 305 Pfam PF00892 EamA-like transporter family 149 287 3.3E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_1935 681e5760f7a5058ea716f865ed2d7fa7 305 Pfam PF00892 EamA-like transporter family 4 134 7.2E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0592 4042ed2ba25bb590dd303f01bf354ed8 126 SMART SM00345 15 74 1.6E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0592 4042ed2ba25bb590dd303f01bf354ed8 126 SUPERFAMILY SSF46785 4 89 7.4E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0592 4042ed2ba25bb590dd303f01bf354ed8 126 Gene3D G3DSA:1.10.10.10 8 126 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0592 4042ed2ba25bb590dd303f01bf354ed8 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.9E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_4836 3a58915a4d26a51e2837a10f56cbee63 132 Gene3D G3DSA:3.30.1490.10 75 132 9.9E-26 T 14-10-2018 MC28_4836 3a58915a4d26a51e2837a10f56cbee63 132 Gene3D G3DSA:3.30.1370.30 4 74 2.8E-34 T 14-10-2018 MC28_4836 3a58915a4d26a51e2837a10f56cbee63 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.966 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4836 3a58915a4d26a51e2837a10f56cbee63 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4836 3a58915a4d26a51e2837a10f56cbee63 132 SUPERFAMILY SSF56047 2 132 3.27E-49 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4836 3a58915a4d26a51e2837a10f56cbee63 132 Pfam PF00410 Ribosomal protein S8 5 132 3.9E-54 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_0556 022fa6935838ca8716f698921a5841c3 394 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 125 378 1.2E-19 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 MC28_0556 022fa6935838ca8716f698921a5841c3 394 Gene3D G3DSA:3.40.50.720 1 111 1.1E-8 T 14-10-2018 MC28_0556 022fa6935838ca8716f698921a5841c3 394 Gene3D G3DSA:3.40.50.720 323 393 5.4E-9 T 14-10-2018 MC28_0556 022fa6935838ca8716f698921a5841c3 394 SUPERFAMILY SSF51735 2 142 5.49E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0556 022fa6935838ca8716f698921a5841c3 394 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 102 2.6E-14 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 MC28_0556 022fa6935838ca8716f698921a5841c3 394 Gene3D G3DSA:3.30.360.10 127 317 2.8E-40 T 14-10-2018 MC28_5038 d15f30c28ffb088072b45684900a9874 251 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 8.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_5038 d15f30c28ffb088072b45684900a9874 251 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 167 8.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_5038 d15f30c28ffb088072b45684900a9874 251 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 120 133 8.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_5038 d15f30c28ffb088072b45684900a9874 251 Gene3D G3DSA:3.40.50.1000 7 227 2.1E-29 T 14-10-2018 IPR023214 HAD superfamily MC28_5038 d15f30c28ffb088072b45684900a9874 251 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 121 201 1.3E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_5038 d15f30c28ffb088072b45684900a9874 251 SUPERFAMILY SSF56784 1 232 5.35E-42 T 14-10-2018 IPR036412 HAD-like superfamily MC28_5038 d15f30c28ffb088072b45684900a9874 251 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 201 1.3E-26 T 14-10-2018 MC28_5038 d15f30c28ffb088072b45684900a9874 251 Gene3D G3DSA:1.10.150.240 19 106 2.1E-29 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_1480 60987872ee1a4497610fbfe4acf009cb 293 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 287 3.7E-68 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MC28_1480 60987872ee1a4497610fbfe4acf009cb 293 Gene3D G3DSA:3.30.70.1350 206 287 1.8E-17 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 MC28_1480 60987872ee1a4497610fbfe4acf009cb 293 Pfam PF01545 Cation efflux family 14 205 5.1E-48 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MC28_1480 60987872ee1a4497610fbfe4acf009cb 293 Gene3D G3DSA:1.20.1510.10 9 205 1.3E-57 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily MC28_1480 60987872ee1a4497610fbfe4acf009cb 293 SUPERFAMILY SSF161111 7 207 1.83E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily MC28_1480 60987872ee1a4497610fbfe4acf009cb 293 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 285 1.9E-19 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain MC28_1480 60987872ee1a4497610fbfe4acf009cb 293 SUPERFAMILY SSF160240 209 287 1.44E-21 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 MC28_4762 e619bf74432d80e551fb04715e2feb63 124 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 122 6.2E-56 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 MC28_4762 e619bf74432d80e551fb04715e2feb63 124 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 MC28_4762 e619bf74432d80e551fb04715e2feb63 124 Gene3D G3DSA:3.30.1330.40 1 124 1.3E-54 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 MC28_4762 e619bf74432d80e551fb04715e2feb63 124 Pfam PF01042 Endoribonuclease L-PSP 7 122 4.9E-47 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 MC28_4762 e619bf74432d80e551fb04715e2feb63 124 SUPERFAMILY SSF55298 2 123 9.42E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 MC28_2946 91917d057e08cb46d3585ddcac3c986b 264 SUPERFAMILY SSF56300 1 256 6.33E-91 T 14-10-2018 MC28_2946 91917d057e08cb46d3585ddcac3c986b 264 Pfam PF13277 YmdB-like protein 4 254 1.3E-109 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like MC28_2946 91917d057e08cb46d3585ddcac3c986b 264 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 264 8.1E-115 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like MC28_2946 91917d057e08cb46d3585ddcac3c986b 264 PIRSF PIRSF004789 1 263 1.0E-102 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like MC28_2946 91917d057e08cb46d3585ddcac3c986b 264 Gene3D G3DSA:3.60.21.10 1 264 6.6E-116 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_1304 d559174cf092b4de1d7ea3b18ab8b44c 98 Pfam PF06013 Proteins of 100 residues with WXG 4 89 1.7E-23 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like MC28_1304 d559174cf092b4de1d7ea3b18ab8b44c 98 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 4 90 1.2E-24 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like MC28_1304 d559174cf092b4de1d7ea3b18ab8b44c 98 Gene3D G3DSA:1.10.287.1060 2 96 2.1E-24 T 14-10-2018 MC28_1304 d559174cf092b4de1d7ea3b18ab8b44c 98 SUPERFAMILY SSF140453 3 96 1.83E-23 T 14-10-2018 IPR036689 ESAT-6-like superfamily MC28_5196 146f04094fe02a117af8a648210881d1 387 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 10 237 5.6E-11 T 14-10-2018 IPR024455 Phage capsid MC28_5196 146f04094fe02a117af8a648210881d1 387 Pfam PF05065 Phage capsid family 95 372 4.6E-10 T 14-10-2018 IPR024455 Phage capsid MC28_5196 146f04094fe02a117af8a648210881d1 387 SUPERFAMILY SSF56563 93 374 6.8E-17 T 14-10-2018 MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 Pfam PF13646 HEAT repeats 267 351 2.5E-12 T 14-10-2018 MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 SUPERFAMILY SSF110836 3 88 2.48E-22 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 Pfam PF13769 Virulence factor 107 185 3.1E-28 T 14-10-2018 IPR025989 Virulence factor domain MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 Gene3D G3DSA:3.30.1370.70 1 92 5.1E-27 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 6 86 2.5E-18 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 SMART SM00932 4 90 2.8E-26 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 Gene3D G3DSA:1.25.10.10 196 374 2.8E-26 T 14-10-2018 IPR011989 Armadillo-like helical MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 SUPERFAMILY SSF48371 208 372 4.22E-31 T 14-10-2018 IPR016024 Armadillo-type fold MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 SMART SM00567 E-Z type HEAT repeats 279 308 17.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 SMART SM00567 E-Z type HEAT repeats 248 277 0.47 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 MC28_1381 08a1f29e312c838d7293b52fbcc8d450 375 SMART SM00567 E-Z type HEAT repeats 310 339 1.6E-5 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 MC28_2750 8e32ffa432677e0a3fa358af40e97e31 225 Gene3D G3DSA:3.40.50.2300 1 121 4.0E-39 T 14-10-2018 MC28_2750 8e32ffa432677e0a3fa358af40e97e31 225 SMART SM00862 150 223 3.0E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2750 8e32ffa432677e0a3fa358af40e97e31 225 Gene3D G3DSA:1.10.10.10 122 225 2.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2750 8e32ffa432677e0a3fa358af40e97e31 225 Pfam PF00072 Response regulator receiver domain 5 113 2.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2750 8e32ffa432677e0a3fa358af40e97e31 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 223 4.2E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_2750 8e32ffa432677e0a3fa358af40e97e31 225 SUPERFAMILY SSF52172 3 182 8.64E-42 T 14-10-2018 IPR011006 CheY-like superfamily MC28_2750 8e32ffa432677e0a3fa358af40e97e31 225 SMART SM00448 3 113 2.2E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1438 0d2c34ec8cf1d412729198dc40f2bc72 284 SUPERFAMILY SSF46689 8 80 9.85E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_1438 0d2c34ec8cf1d412729198dc40f2bc72 284 Gene3D G3DSA:1.10.10.10 3 84 6.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1438 0d2c34ec8cf1d412729198dc40f2bc72 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 78 2.1E-20 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 MC28_1438 0d2c34ec8cf1d412729198dc40f2bc72 284 SUPERFAMILY SSF53697 94 281 3.44E-45 T 14-10-2018 MC28_1438 0d2c34ec8cf1d412729198dc40f2bc72 284 Pfam PF01380 SIS domain 130 258 2.8E-22 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 MC28_1438 0d2c34ec8cf1d412729198dc40f2bc72 284 Gene3D G3DSA:3.40.50.10490 98 283 8.9E-52 T 14-10-2018 MC28_0975 e273a042bf624fad4d69b1ed52f4161e 181 SMART SM00530 9 64 2.1E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0975 e273a042bf624fad4d69b1ed52f4161e 181 SUPERFAMILY SSF51182 57 181 8.05E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_0975 e273a042bf624fad4d69b1ed52f4161e 181 Gene3D G3DSA:1.10.260.40 1 70 1.3E-18 T 14-10-2018 MC28_0975 e273a042bf624fad4d69b1ed52f4161e 181 Gene3D G3DSA:2.60.120.10 71 176 2.2E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_0975 e273a042bf624fad4d69b1ed52f4161e 181 Pfam PF01381 Helix-turn-helix 10 61 1.0E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0975 e273a042bf624fad4d69b1ed52f4161e 181 Pfam PF07883 Cupin domain 106 174 5.2E-15 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_0975 e273a042bf624fad4d69b1ed52f4161e 181 SUPERFAMILY SSF47413 3 72 1.01E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_0756 8a8d123d597de7bee60c6288dc3354a9 170 Pfam PF00355 Rieske [2Fe-2S] domain 51 149 4.2E-14 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MC28_0756 8a8d123d597de7bee60c6288dc3354a9 170 PRINTS PR00162 Rieske 2Fe-2S subunit signature 121 133 1.5E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 MC28_0756 8a8d123d597de7bee60c6288dc3354a9 170 PRINTS PR00162 Rieske 2Fe-2S subunit signature 97 108 1.5E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 MC28_0756 8a8d123d597de7bee60c6288dc3354a9 170 PRINTS PR00162 Rieske 2Fe-2S subunit signature 133 145 1.5E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 MC28_0756 8a8d123d597de7bee60c6288dc3354a9 170 Gene3D G3DSA:2.102.10.10 40 167 4.9E-27 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 MC28_0756 8a8d123d597de7bee60c6288dc3354a9 170 SUPERFAMILY SSF50022 6 160 1.44E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 MC28_0054 a97b9601a7c052ee805511bfd9c2ecbb 98 Gene3D G3DSA:3.40.250.10 1 98 2.4E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0054 a97b9601a7c052ee805511bfd9c2ecbb 98 Pfam PF00581 Rhodanese-like domain 5 94 2.9E-12 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0054 a97b9601a7c052ee805511bfd9c2ecbb 98 SUPERFAMILY SSF52821 2 94 1.7E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0054 a97b9601a7c052ee805511bfd9c2ecbb 98 SMART SM00450 5 97 1.5E-15 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_G177 8b70e6c63625a5e21de236467ccb2a53 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 48 4.3E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_G177 8b70e6c63625a5e21de236467ccb2a53 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_G177 8b70e6c63625a5e21de236467ccb2a53 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 15 25 2.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_G177 8b70e6c63625a5e21de236467ccb2a53 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 4 15 2.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_G177 8b70e6c63625a5e21de236467ccb2a53 276 SUPERFAMILY SSF46785 2 97 1.82E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_G177 8b70e6c63625a5e21de236467ccb2a53 276 Gene3D G3DSA:3.40.190.290 77 273 8.7E-44 T 14-10-2018 MC28_G177 8b70e6c63625a5e21de236467ccb2a53 276 Pfam PF03466 LysR substrate binding domain 76 273 5.7E-39 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_G177 8b70e6c63625a5e21de236467ccb2a53 276 Gene3D G3DSA:1.10.10.10 1 74 2.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G177 8b70e6c63625a5e21de236467ccb2a53 276 SUPERFAMILY SSF53850 75 274 1.81E-36 T 14-10-2018 MC28_1105 e622c6722eb4173326a8ef8d2ec158cf 87 Gene3D G3DSA:1.10.443.10 7 87 1.6E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_1105 e622c6722eb4173326a8ef8d2ec158cf 87 SUPERFAMILY SSF56349 22 86 3.83E-14 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_1105 e622c6722eb4173326a8ef8d2ec158cf 87 Pfam PF00589 Phage integrase family 16 85 1.3E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_1467 3cd09f1d341fa27a75431a1ba6bbee9e 422 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 409 8.9E-114 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase MC28_1467 3cd09f1d341fa27a75431a1ba6bbee9e 422 SUPERFAMILY SSF55031 203 313 7.18E-14 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_1467 3cd09f1d341fa27a75431a1ba6bbee9e 422 SUPERFAMILY SSF53187 5 419 2.02E-63 T 14-10-2018 MC28_1467 3cd09f1d341fa27a75431a1ba6bbee9e 422 Pfam PF01546 Peptidase family M20/M25/M40 97 415 2.3E-38 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_1467 3cd09f1d341fa27a75431a1ba6bbee9e 422 Gene3D G3DSA:3.40.630.10 27 418 2.7E-138 T 14-10-2018 MC28_1467 3cd09f1d341fa27a75431a1ba6bbee9e 422 Pfam PF07687 Peptidase dimerisation domain 202 311 2.8E-17 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_1467 3cd09f1d341fa27a75431a1ba6bbee9e 422 Gene3D G3DSA:3.30.70.360 204 330 2.7E-138 T 14-10-2018 MC28_4414 c2a82c40d4583590b8431016b5de58b0 400 SUPERFAMILY SSF50156 306 390 3.86E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 MC28_4414 c2a82c40d4583590b8431016b5de58b0 400 Gene3D G3DSA:2.30.42.10 276 378 6.0E-8 T 14-10-2018 MC28_G073 77974766962dc3a51679eb1d09244ac4 185 SMART SM00347 55 156 5.2E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_G073 77974766962dc3a51679eb1d09244ac4 185 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 112 1.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_G073 77974766962dc3a51679eb1d09244ac4 185 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 132 1.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_G073 77974766962dc3a51679eb1d09244ac4 185 PRINTS PR00598 Bacterial regulatory protein MarR family signature 146 166 1.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_G073 77974766962dc3a51679eb1d09244ac4 185 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 96 1.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_G073 77974766962dc3a51679eb1d09244ac4 185 SUPERFAMILY SSF46785 29 170 7.86E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_G073 77974766962dc3a51679eb1d09244ac4 185 Pfam PF01047 MarR family 62 120 6.2E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_G073 77974766962dc3a51679eb1d09244ac4 185 Gene3D G3DSA:1.10.10.10 12 171 6.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4567 23e2ffb4cf8d3b1376ef71ffa11cda85 195 Gene3D G3DSA:3.40.50.300 1 141 4.1E-64 T 14-10-2018 MC28_4567 23e2ffb4cf8d3b1376ef71ffa11cda85 195 Pfam PF00265 Thymidine kinase 8 187 1.8E-60 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 MC28_4567 23e2ffb4cf8d3b1376ef71ffa11cda85 195 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 MC28_4567 23e2ffb4cf8d3b1376ef71ffa11cda85 195 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 38.826 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 MC28_4567 23e2ffb4cf8d3b1376ef71ffa11cda85 195 Gene3D G3DSA:3.30.60.20 142 195 2.9E-26 T 14-10-2018 MC28_4567 23e2ffb4cf8d3b1376ef71ffa11cda85 195 PIRSF PIRSF035805 5 195 1.8E-68 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 MC28_4567 23e2ffb4cf8d3b1376ef71ffa11cda85 195 SUPERFAMILY SSF57716 142 192 9.03E-16 T 14-10-2018 MC28_4567 23e2ffb4cf8d3b1376ef71ffa11cda85 195 SUPERFAMILY SSF52540 8 142 2.48E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0440 fd791434d253ebdb0edd868157b2c52a 323 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 320 7.4E-150 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 MC28_0440 fd791434d253ebdb0edd868157b2c52a 323 Gene3D G3DSA:3.90.25.10 192 313 3.3E-129 T 14-10-2018 MC28_0440 fd791434d253ebdb0edd868157b2c52a 323 SUPERFAMILY SSF51735 1 317 3.61E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0440 fd791434d253ebdb0edd868157b2c52a 323 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 306 1.5E-93 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_0440 fd791434d253ebdb0edd868157b2c52a 323 Gene3D G3DSA:3.40.50.720 2 305 3.3E-129 T 14-10-2018 MC28_2156 6577179a14b1ba295da9739a15d79de1 172 Pfam PF12867 DinB superfamily 30 158 9.0E-20 T 14-10-2018 IPR024775 DinB-like domain MC28_2156 6577179a14b1ba295da9739a15d79de1 172 Gene3D G3DSA:1.20.120.450 23 163 7.6E-28 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2156 6577179a14b1ba295da9739a15d79de1 172 SUPERFAMILY SSF109854 5 161 5.04E-33 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_0620 9a84cc7864f1d5b64cecd035c37aa7d8 264 Pfam PF02673 Bacitracin resistance protein BacA 8 257 6.3E-83 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_0620 9a84cc7864f1d5b64cecd035c37aa7d8 264 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 262 17.656 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_0620 9a84cc7864f1d5b64cecd035c37aa7d8 264 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 8 255 1.5E-87 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_4450 f78f1cdfddb5bca42416cf7127bdad99 100 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 5.1E-34 T 14-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 MC28_4450 f78f1cdfddb5bca42416cf7127bdad99 100 Gene3D G3DSA:3.40.50.2300 1 100 1.5E-38 T 14-10-2018 MC28_4450 f78f1cdfddb5bca42416cf7127bdad99 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 1.0E-22 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 MC28_4450 f78f1cdfddb5bca42416cf7127bdad99 100 SUPERFAMILY SSF52794 1 98 1.44E-35 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 MC28_0356 131100b94d91e8b25be60589e09b24cb 187 Pfam PF00717 Peptidase S24-like 36 103 4.3E-22 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C MC28_0356 131100b94d91e8b25be60589e09b24cb 187 ProSitePatterns PS00761 Signal peptidases I signature 3. 142 155 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 MC28_0356 131100b94d91e8b25be60589e09b24cb 187 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 177 2.3E-55 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_0356 131100b94d91e8b25be60589e09b24cb 187 ProSitePatterns PS00501 Signal peptidases I serine active site. 38 45 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 MC28_0356 131100b94d91e8b25be60589e09b24cb 187 SUPERFAMILY SSF51306 27 180 1.05E-54 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily MC28_0356 131100b94d91e8b25be60589e09b24cb 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 5.5E-21 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_0356 131100b94d91e8b25be60589e09b24cb 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 91 5.5E-21 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_0356 131100b94d91e8b25be60589e09b24cb 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 137 156 5.5E-21 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_0356 131100b94d91e8b25be60589e09b24cb 187 Gene3D G3DSA:2.10.109.10 59 187 5.1E-52 T 14-10-2018 MC28_0356 131100b94d91e8b25be60589e09b24cb 187 ProSitePatterns PS00760 Signal peptidases I lysine active site. 81 93 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 MC28_3745 cd64711d5069eff0b606f0780aeb2d06 240 SUPERFAMILY SSF102712 161 207 5.89E-5 T 14-10-2018 MC28_3745 cd64711d5069eff0b606f0780aeb2d06 240 Gene3D G3DSA:3.40.140.10 116 240 2.0E-49 T 14-10-2018 MC28_3745 cd64711d5069eff0b606f0780aeb2d06 240 Pfam PF04002 RadC-like JAB domain 119 238 6.6E-49 T 14-10-2018 IPR025657 RadC-like JAB domain MC28_3745 cd64711d5069eff0b606f0780aeb2d06 240 SUPERFAMILY SSF47781 61 106 5.72E-8 T 14-10-2018 IPR010994 RuvA domain 2-like MC28_3745 cd64711d5069eff0b606f0780aeb2d06 240 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 239 3.1E-82 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 MC28_3745 cd64711d5069eff0b606f0780aeb2d06 240 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 189 194 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site MC28_0022 bab30dfca9b1ee57cc85dcb11cba8d71 379 SUPERFAMILY SSF103473 2 371 3.14E-74 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0022 bab30dfca9b1ee57cc85dcb11cba8d71 379 Gene3D G3DSA:1.20.1720.10 1 334 1.2E-80 T 14-10-2018 MC28_0022 bab30dfca9b1ee57cc85dcb11cba8d71 379 Pfam PF07690 Major Facilitator Superfamily 199 366 5.9E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0022 bab30dfca9b1ee57cc85dcb11cba8d71 379 Pfam PF07690 Major Facilitator Superfamily 2 184 1.6E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2742 97c570a4fd439a458563ca6b806646be 268 Pfam PF12679 ABC-2 family transporter protein 28 266 2.9E-13 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 MC28_2680 82cbfc5dcba4e714151eddc524f6a518 172 SUPERFAMILY SSF55729 3 151 4.96E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2680 82cbfc5dcba4e714151eddc524f6a518 172 Gene3D G3DSA:3.40.630.30 12 151 2.6E-22 T 14-10-2018 MC28_2680 82cbfc5dcba4e714151eddc524f6a518 172 Pfam PF13302 Acetyltransferase (GNAT) domain 21 150 3.8E-12 T 14-10-2018 IPR000182 GNAT domain MC28_D071 be5f2dde47c3622eaf811300a7af0fec 211 Gene3D G3DSA:1.10.1660.10 4 82 8.1E-12 T 14-10-2018 MC28_D071 be5f2dde47c3622eaf811300a7af0fec 211 Pfam PF13152 Protein of unknown function (DUF3967) 169 210 3.7E-12 T 14-10-2018 IPR025052 Domain of unknown function DUF3967 MC28_D071 be5f2dde47c3622eaf811300a7af0fec 211 SUPERFAMILY SSF46955 8 120 5.49E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_D071 be5f2dde47c3622eaf811300a7af0fec 211 Pfam PF13411 MerR HTH family regulatory protein 8 78 5.9E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0456 6af0554a1b192847a990bfb5cf39be31 488 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 3 483 2.3E-220 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 MC28_0456 6af0554a1b192847a990bfb5cf39be31 488 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 31 429 2.6E-100 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 MC28_0456 6af0554a1b192847a990bfb5cf39be31 488 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 153 178 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site MC28_0456 6af0554a1b192847a990bfb5cf39be31 488 Pfam PF00474 Sodium:solute symporter family 31 429 1.6E-106 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 MC28_0456 6af0554a1b192847a990bfb5cf39be31 488 Gene3D G3DSA:1.20.1730.10 19 487 2.8E-104 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily MC28_4310 88d533b09755ca798e6afb5192501a1b 399 Pfam PF00999 Sodium/hydrogen exchanger family 12 378 2.9E-63 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 MC28_4310 88d533b09755ca798e6afb5192501a1b 399 Gene3D G3DSA:1.20.1530.20 2 386 6.1E-64 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily MC28_3318 9f7c41d2667070eb160076e44f2df56b 209 SUPERFAMILY SSF158560 3 74 1.7E-16 T 14-10-2018 MC28_4316 a3880d91088f94d017aae87a8693942d 187 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 1 174 2.5E-59 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG MC28_4316 a3880d91088f94d017aae87a8693942d 187 SUPERFAMILY SSF102405 1 174 2.14E-55 T 14-10-2018 MC28_4316 a3880d91088f94d017aae87a8693942d 187 Gene3D G3DSA:3.40.50.450 1 186 4.1E-74 T 14-10-2018 MC28_4316 a3880d91088f94d017aae87a8693942d 187 Pfam PF03641 Possible lysine decarboxylase 41 170 1.0E-40 T 14-10-2018 IPR031100 LOG family MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 SUPERFAMILY SSF52540 239 480 1.68E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 SUPERFAMILY SSF46689 451 552 3.14E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 SMART SM00382 257 401 2.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 Gene3D G3DSA:1.10.10.60 491 553 3.1E-13 T 14-10-2018 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 Pfam PF13596 PAS domain 101 201 3.4E-5 T 14-10-2018 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 SMART SM00091 98 163 0.0021 T 14-10-2018 IPR000014 PAS domain MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 533 553 9.2E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 516 533 9.2E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 Gene3D G3DSA:1.10.8.60 410 490 5.9E-23 T 14-10-2018 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 Gene3D G3DSA:3.40.50.300 210 409 1.7E-66 T 14-10-2018 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 SUPERFAMILY SSF55785 94 201 1.77E-9 T 14-10-2018 IPR035965 PAS domain superfamily MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 451 460 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 324 339 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 261 274 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 Pfam PF00158 Sigma-54 interaction domain 238 404 1.0E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 Pfam PF02954 Bacterial regulatory protein, Fis family 511 550 8.4E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MC28_2025 bb1b9c38d78121d94dfea8823950b288 553 Gene3D G3DSA:3.30.450.20 90 201 1.2E-12 T 14-10-2018 MC28_2958 b64e8be4fec7a658465a11636504b9bd 424 Gene3D G3DSA:3.30.830.10 238 424 1.3E-43 T 14-10-2018 MC28_2958 b64e8be4fec7a658465a11636504b9bd 424 SUPERFAMILY SSF63411 12 232 5.59E-26 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MC28_2958 b64e8be4fec7a658465a11636504b9bd 424 Pfam PF05193 Peptidase M16 inactive domain 184 356 7.7E-27 T 14-10-2018 IPR007863 Peptidase M16, C-terminal MC28_2958 b64e8be4fec7a658465a11636504b9bd 424 Gene3D G3DSA:3.30.830.10 7 236 2.9E-63 T 14-10-2018 MC28_2958 b64e8be4fec7a658465a11636504b9bd 424 SUPERFAMILY SSF63411 243 411 6.0E-33 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MC28_4736 141d1b3e19a8d50075337bb48a59c88e 179 Gene3D G3DSA:3.40.50.850 1 174 5.3E-41 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_4736 141d1b3e19a8d50075337bb48a59c88e 179 SUPERFAMILY SSF52499 2 176 8.63E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_4736 141d1b3e19a8d50075337bb48a59c88e 179 Pfam PF00857 Isochorismatase family 4 164 1.1E-28 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_3618 784acbb8a508e1704b8667123c3653c6 188 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 73 109 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 MC28_3618 784acbb8a508e1704b8667123c3653c6 188 Gene3D G3DSA:3.40.140.10 5 149 3.0E-46 T 14-10-2018 MC28_3618 784acbb8a508e1704b8667123c3653c6 188 SUPERFAMILY SSF53927 10 148 1.37E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 MC28_3618 784acbb8a508e1704b8667123c3653c6 188 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 119 1.5E-28 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain MC28_3618 784acbb8a508e1704b8667123c3653c6 188 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 5 154 8.6E-91 T 14-10-2018 IPR013404 Competence operon E, ComEB MC28_0425 e100331fdc1f7cca12b66239126b8975 292 SUPERFAMILY SSF55120 70 289 6.4E-72 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_0425 e100331fdc1f7cca12b66239126b8975 292 Gene3D G3DSA:3.30.2350.10 78 292 2.6E-69 T 14-10-2018 MC28_0425 e100331fdc1f7cca12b66239126b8975 292 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 33 289 1.5E-77 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_0425 e100331fdc1f7cca12b66239126b8975 292 Pfam PF00849 RNA pseudouridylate synthase 86 236 1.5E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_0425 e100331fdc1f7cca12b66239126b8975 292 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 128 142 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_4937 7c02f61de7a6f56e3cfb389a0635648b 320 SUPERFAMILY SSF51658 85 289 2.04E-12 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily MC28_4937 7c02f61de7a6f56e3cfb389a0635648b 320 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 2 304 1.9E-68 T 14-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 MC28_4937 7c02f61de7a6f56e3cfb389a0635648b 320 Gene3D G3DSA:3.20.20.150 2 309 5.1E-98 T 14-10-2018 MC28_4937 7c02f61de7a6f56e3cfb389a0635648b 320 Pfam PF03851 UV-endonuclease UvdE 5 275 2.4E-90 T 14-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 MC28_F132 0e6ad2ecf28051af96447ea032cec441 262 Pfam PF00005 ABC transporter 28 176 3.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_F132 0e6ad2ecf28051af96447ea032cec441 262 SMART SM00382 37 225 4.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_F132 0e6ad2ecf28051af96447ea032cec441 262 SUPERFAMILY SSF52540 9 229 9.78E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F132 0e6ad2ecf28051af96447ea032cec441 262 Gene3D G3DSA:3.40.50.300 6 245 1.9E-66 T 14-10-2018 MC28_1062 8601841549b3468b712a02eb28c49f46 346 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 34 210 1.6E-58 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_1062 8601841549b3468b712a02eb28c49f46 346 Gene3D G3DSA:1.20.1170.10 28 346 2.4E-111 T 14-10-2018 MC28_1062 8601841549b3468b712a02eb28c49f46 346 SUPERFAMILY SSF58100 21 345 1.36E-99 T 14-10-2018 MC28_1794 387af30f0feb1ea7a665d1950cfd2fe5 311 SUPERFAMILY SSF55874 147 308 1.17E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1794 387af30f0feb1ea7a665d1950cfd2fe5 311 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 201 306 1.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1794 387af30f0feb1ea7a665d1950cfd2fe5 311 SMART SM00387 200 311 3.4E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1794 387af30f0feb1ea7a665d1950cfd2fe5 311 Gene3D G3DSA:1.10.287.130 105 152 3.2E-33 T 14-10-2018 MC28_1794 387af30f0feb1ea7a665d1950cfd2fe5 311 Gene3D G3DSA:3.30.565.10 153 307 3.2E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1794 387af30f0feb1ea7a665d1950cfd2fe5 311 PRINTS PR00344 Bacterial sensor protein C-terminal signature 272 290 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1794 387af30f0feb1ea7a665d1950cfd2fe5 311 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 309 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1794 387af30f0feb1ea7a665d1950cfd2fe5 311 PRINTS PR00344 Bacterial sensor protein C-terminal signature 238 252 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1794 387af30f0feb1ea7a665d1950cfd2fe5 311 PRINTS PR00344 Bacterial sensor protein C-terminal signature 256 266 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4651 bbb1b61706e3157d1bc758a0a9e9b85d 399 SUPERFAMILY SSF103473 9 398 7.06E-89 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4651 bbb1b61706e3157d1bc758a0a9e9b85d 399 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_4651 bbb1b61706e3157d1bc758a0a9e9b85d 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 269 284 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_4651 bbb1b61706e3157d1bc758a0a9e9b85d 399 Gene3D G3DSA:1.20.1250.20 9 399 7.4E-94 T 14-10-2018 MC28_4651 bbb1b61706e3157d1bc758a0a9e9b85d 399 Pfam PF07690 Major Facilitator Superfamily 21 263 3.6E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0396 5871ca094f6194fc65d8351cb30f66ea 412 SUPERFAMILY SSF53901 4 251 2.58E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_0396 5871ca094f6194fc65d8351cb30f66ea 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 3.9E-62 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal MC28_0396 5871ca094f6194fc65d8351cb30f66ea 412 SMART SM00825 Beta-ketoacyl synthase 6 412 6.3E-16 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MC28_0396 5871ca094f6194fc65d8351cb30f66ea 412 SUPERFAMILY SSF53901 214 411 4.41E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_0396 5871ca094f6194fc65d8351cb30f66ea 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 1.1E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal MC28_0396 5871ca094f6194fc65d8351cb30f66ea 412 Gene3D G3DSA:3.40.47.10 256 400 3.1E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_0396 5871ca094f6194fc65d8351cb30f66ea 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 3.1E-198 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 MC28_0396 5871ca094f6194fc65d8351cb30f66ea 412 Gene3D G3DSA:3.40.47.10 1 254 2.6E-105 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_0396 5871ca094f6194fc65d8351cb30f66ea 412 PIRSF PIRSF000447 1 412 1.1E-183 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 MC28_2404 d38fa8dd1b8130871a7e1f87026eaff5 163 SUPERFAMILY SSF160424 3 161 1.26E-47 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily MC28_2404 d38fa8dd1b8130871a7e1f87026eaff5 163 Pfam PF04634 Protein of unknown function, DUF600 7 151 9.3E-41 T 14-10-2018 IPR006728 Protein of unknown function DUF600 MC28_2404 d38fa8dd1b8130871a7e1f87026eaff5 163 Gene3D G3DSA:3.30.500.20 2 119 2.6E-37 T 14-10-2018 MC28_2404 d38fa8dd1b8130871a7e1f87026eaff5 163 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 158 5.0E-33 T 14-10-2018 IPR006728 Protein of unknown function DUF600 MC28_4689 cdc456db12c5b28e17679fd8d890a4f6 605 Gene3D G3DSA:1.10.1370.20 233 605 3.2E-119 T 14-10-2018 MC28_4689 cdc456db12c5b28e17679fd8d890a4f6 605 Pfam PF01432 Peptidase family M3 212 589 7.8E-41 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 MC28_4689 cdc456db12c5b28e17679fd8d890a4f6 605 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 11 601 1.1E-225 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 MC28_4689 cdc456db12c5b28e17679fd8d890a4f6 605 Pfam PF08439 Oligopeptidase F 118 187 2.0E-17 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain MC28_4689 cdc456db12c5b28e17679fd8d890a4f6 605 Gene3D G3DSA:1.20.140.70 28 183 2.0E-40 T 14-10-2018 MC28_4689 cdc456db12c5b28e17679fd8d890a4f6 605 SUPERFAMILY SSF55486 11 584 2.02E-108 T 14-10-2018 MC28_0696 3ac5030818657a80dfb99d8812e480a4 179 Pfam PF00589 Phage integrase family 14 176 1.7E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_0696 3ac5030818657a80dfb99d8812e480a4 179 SUPERFAMILY SSF56349 10 178 7.06E-34 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_0696 3ac5030818657a80dfb99d8812e480a4 179 Gene3D G3DSA:1.10.443.10 5 179 2.6E-27 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_4093 4e2ca08b3cd63bfc9f62d5e8db02b2b8 56 Pfam PF12669 Virus attachment protein p12 family 5 47 5.6E-11 T 14-10-2018 MC28_F185 57c2a5c6c033da3238fa3781a8a128c6 98 Pfam PF00550 Phosphopantetheine attachment site 20 89 2.3E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain MC28_F185 57c2a5c6c033da3238fa3781a8a128c6 98 Hamap MF_01217 Acyl carrier protein [acpP]. 16 93 14.155 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 MC28_F185 57c2a5c6c033da3238fa3781a8a128c6 98 SUPERFAMILY SSF47336 18 95 2.22E-16 T 14-10-2018 IPR036736 ACP-like superfamily MC28_F185 57c2a5c6c033da3238fa3781a8a128c6 98 Gene3D G3DSA:1.10.1200.10 16 97 6.6E-21 T 14-10-2018 IPR036736 ACP-like superfamily MC28_G202 d2757cb9e25b8b861560ad5f0d0a8f2b 258 SUPERFAMILY SSF55729 92 248 7.27E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_G202 d2757cb9e25b8b861560ad5f0d0a8f2b 258 Gene3D G3DSA:3.40.630.30 117 249 3.5E-74 T 14-10-2018 MC28_G202 d2757cb9e25b8b861560ad5f0d0a8f2b 258 Gene3D G3DSA:3.40.630.80 13 256 3.5E-74 T 14-10-2018 MC28_0207 c847aa7486fd60621669334461f35263 49 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 23 46 8.1E-12 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_0207 c847aa7486fd60621669334461f35263 49 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 25 48 3.0E-11 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_4612 e4a1924e37cd1fee470eab446d8dd75b 434 Gene3D G3DSA:1.20.1250.30 235 412 4.6E-166 T 14-10-2018 MC28_4612 e4a1924e37cd1fee470eab446d8dd75b 434 Pfam PF01966 HD domain 61 180 6.9E-17 T 14-10-2018 IPR006674 HD domain MC28_4612 e4a1924e37cd1fee470eab446d8dd75b 434 Gene3D G3DSA:1.10.3210.10 12 401 4.6E-166 T 14-10-2018 MC28_4612 e4a1924e37cd1fee470eab446d8dd75b 434 SMART SM00471 57 187 3.2E-12 T 14-10-2018 IPR003607 HD/PDEase domain MC28_4612 e4a1924e37cd1fee470eab446d8dd75b 434 SUPERFAMILY SSF109604 3 413 2.72E-120 T 14-10-2018 MC28_1007 5c193296223a1962d671619f17c72177 194 Gene3D G3DSA:1.20.1250.20 2 188 3.3E-14 T 14-10-2018 MC28_1007 5c193296223a1962d671619f17c72177 194 Pfam PF07690 Major Facilitator Superfamily 7 141 9.7E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1007 5c193296223a1962d671619f17c72177 194 SUPERFAMILY SSF103473 6 187 1.83E-16 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_3062 d098c758976376f721e483f4336eb2ce 188 ProSitePatterns PS00761 Signal peptidases I signature 3. 146 159 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 MC28_3062 d098c758976376f721e483f4336eb2ce 188 ProSitePatterns PS00760 Signal peptidases I lysine active site. 85 97 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 MC28_3062 d098c758976376f721e483f4336eb2ce 188 ProSitePatterns PS00501 Signal peptidases I serine active site. 42 49 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 MC28_3062 d098c758976376f721e483f4336eb2ce 188 Gene3D G3DSA:2.10.109.10 63 187 1.9E-45 T 14-10-2018 MC28_3062 d098c758976376f721e483f4336eb2ce 188 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 16 181 6.2E-57 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_3062 d098c758976376f721e483f4336eb2ce 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 83 95 8.7E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_3062 d098c758976376f721e483f4336eb2ce 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 33 49 8.7E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_3062 d098c758976376f721e483f4336eb2ce 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 141 160 8.7E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_3062 d098c758976376f721e483f4336eb2ce 188 Pfam PF00717 Peptidase S24-like 40 107 1.3E-20 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C MC28_3062 d098c758976376f721e483f4336eb2ce 188 SUPERFAMILY SSF51306 31 186 8.63E-52 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily MC28_2357 72141a5da4e1a6e8e3e8bf6ba30e05eb 222 Gene3D G3DSA:1.20.1260.120 1 222 4.5E-96 T 14-10-2018 MC28_2357 72141a5da4e1a6e8e3e8bf6ba30e05eb 222 SUPERFAMILY SSF158430 2 81 2.22E-18 T 14-10-2018 MC28_2357 72141a5da4e1a6e8e3e8bf6ba30e05eb 222 Pfam PF11155 Domain of unknown function (DUF2935) 90 206 9.2E-32 T 14-10-2018 IPR021328 Protein of unknown function DUF2935 MC28_2357 72141a5da4e1a6e8e3e8bf6ba30e05eb 222 Pfam PF11155 Domain of unknown function (DUF2935) 12 75 1.4E-13 T 14-10-2018 IPR021328 Protein of unknown function DUF2935 MC28_2357 72141a5da4e1a6e8e3e8bf6ba30e05eb 222 SUPERFAMILY SSF158430 87 210 8.76E-39 T 14-10-2018 MC28_4222 bd985045e466fe1297c3a1cafd669e75 193 SUPERFAMILY SSF52218 1 193 5.7E-59 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_4222 bd985045e466fe1297c3a1cafd669e75 193 Gene3D G3DSA:3.40.50.360 1 192 9.0E-60 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_4222 bd985045e466fe1297c3a1cafd669e75 193 Pfam PF02525 Flavodoxin-like fold 1 187 1.0E-51 T 14-10-2018 IPR003680 Flavodoxin-like fold MC28_3738 a99860fa3f2a9304c577d06098fd91ba 274 Pfam PF02163 Peptidase family M50 101 158 5.6E-8 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 MC28_2540 9e2f4378a8ce32cb1a76a051b902a22a 117 SMART SM00418 11 89 1.1E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2540 9e2f4378a8ce32cb1a76a051b902a22a 117 Gene3D G3DSA:1.10.10.10 2 109 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2540 9e2f4378a8ce32cb1a76a051b902a22a 117 SUPERFAMILY SSF46785 3 87 8.37E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2540 9e2f4378a8ce32cb1a76a051b902a22a 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.1E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2540 9e2f4378a8ce32cb1a76a051b902a22a 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 1.1E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2540 9e2f4378a8ce32cb1a76a051b902a22a 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.1E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2540 9e2f4378a8ce32cb1a76a051b902a22a 117 Pfam PF01022 Bacterial regulatory protein, arsR family 19 62 2.5E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_5016 b7544effc8d70916d0f21e973bb964c7 281 Gene3D G3DSA:3.30.479.30 85 216 3.1E-10 T 14-10-2018 MC28_5016 b7544effc8d70916d0f21e973bb964c7 281 SMART SM00244 49 214 3.1E-11 T 14-10-2018 IPR001107 Band 7 domain MC28_5016 b7544effc8d70916d0f21e973bb964c7 281 SUPERFAMILY SSF117892 87 217 1.96E-12 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily MC28_5016 b7544effc8d70916d0f21e973bb964c7 281 Pfam PF01145 SPFH domain / Band 7 family 53 228 1.3E-22 T 14-10-2018 IPR001107 Band 7 domain MC28_3157 c347aaa2f806a2e655baf80d873d0a93 578 Gene3D G3DSA:2.60.120.260 219 379 7.0E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_4448 f8b1dfdd781fb516ee88496684f0dcde 105 Gene3D G3DSA:1.20.58.280 1 104 2.7E-41 T 14-10-2018 MC28_4448 f8b1dfdd781fb516ee88496684f0dcde 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 8 99 3.6E-39 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 MC28_4448 f8b1dfdd781fb516ee88496684f0dcde 105 SUPERFAMILY SSF46973 2 100 5.62E-38 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 MC28_4448 f8b1dfdd781fb516ee88496684f0dcde 105 PIRSF PIRSF000699 1 105 2.3E-39 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 MC28_2784 54d5bc48b0cb47b7ef0ab30f68b1ba58 273 Gene3D G3DSA:3.60.40.10 5 273 1.2E-19 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_2784 54d5bc48b0cb47b7ef0ab30f68b1ba58 273 SUPERFAMILY SSF81606 7 273 1.03E-18 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_2784 54d5bc48b0cb47b7ef0ab30f68b1ba58 273 SMART SM00332 4 271 0.0023 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_2784 54d5bc48b0cb47b7ef0ab30f68b1ba58 273 Pfam PF13672 Protein phosphatase 2C 20 227 2.7E-14 T 14-10-2018 MC28_1987 b03e40ab66e125cd0943e3f9bb810351 398 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 221 375 1.1E-25 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 MC28_1987 b03e40ab66e125cd0943e3f9bb810351 398 SUPERFAMILY SSF53756 1 392 4.08E-77 T 14-10-2018 MC28_1987 b03e40ab66e125cd0943e3f9bb810351 398 Gene3D G3DSA:3.40.50.2000 217 380 4.5E-120 T 14-10-2018 MC28_1987 b03e40ab66e125cd0943e3f9bb810351 398 Gene3D G3DSA:3.40.50.2000 5 391 4.5E-120 T 14-10-2018 MC28_1987 b03e40ab66e125cd0943e3f9bb810351 398 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 8 395 1.3E-110 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 MC28_4554 1577d692f1495a3aa764e611ec032eba 196 SUPERFAMILY SSF110710 12 190 6.28E-79 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like MC28_4554 1577d692f1495a3aa764e611ec032eba 196 PIRSF PIRSF007510 8 189 1.3E-79 T 14-10-2018 IPR006340 Protein of unknown function DUF436 MC28_4554 1577d692f1495a3aa764e611ec032eba 196 Gene3D G3DSA:3.40.50.10360 10 195 3.6E-81 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like MC28_4554 1577d692f1495a3aa764e611ec032eba 196 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 16 186 6.5E-76 T 14-10-2018 IPR006340 Protein of unknown function DUF436 MC28_4554 1577d692f1495a3aa764e611ec032eba 196 Hamap MF_00800 UPF0340 protein . 1 196 98.312 T 14-10-2018 IPR006340 Protein of unknown function DUF436 MC28_4554 1577d692f1495a3aa764e611ec032eba 196 Pfam PF04260 Protein of unknown function (DUF436) 18 186 4.6E-79 T 14-10-2018 IPR006340 Protein of unknown function DUF436 MC28_4554 1577d692f1495a3aa764e611ec032eba 196 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 18 190 3.0E-94 T 14-10-2018 IPR006340 Protein of unknown function DUF436 MC28_G403 06256534ba530d2ef2a6b207e91ac672 68 Gene3D G3DSA:1.10.443.10 1 53 3.0E-11 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_G403 06256534ba530d2ef2a6b207e91ac672 68 SUPERFAMILY SSF56349 3 45 2.8E-9 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_F199 b600eccb076f2db4fdc3d86db1ca12e5 388 Pfam PF08808 RES domain 135 297 1.6E-6 T 14-10-2018 IPR014914 RES domain MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 SMART SM00487 447 637 1.3E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 Pfam PF12419 SNF2 Helicase protein 270 398 1.6E-33 T 14-10-2018 IPR022138 Helicase SWF/SNF-related MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 Gene3D G3DSA:3.40.50.10810 430 664 7.1E-72 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 SUPERFAMILY SSF52540 670 917 1.5E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 Gene3D G3DSA:1.20.120.850 689 912 3.7E-89 T 14-10-2018 MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 SMART SM00490 780 863 3.7E-23 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 Gene3D G3DSA:3.40.50.300 675 877 3.7E-89 T 14-10-2018 MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 SUPERFAMILY SSF52540 425 665 5.32E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 Pfam PF00176 SNF2 family N-terminal domain 466 735 1.1E-58 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 MC28_4478 82d17527292877deb0a4fa2f82aa0888 918 Pfam PF00271 Helicase conserved C-terminal domain 753 863 1.4E-23 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_2893 d71e6cea2a027a40abfd33bc8efe9019 155 SUPERFAMILY SSF55729 4 155 1.6E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2893 d71e6cea2a027a40abfd33bc8efe9019 155 Pfam PF13673 Acetyltransferase (GNAT) domain 31 153 1.1E-19 T 14-10-2018 IPR000182 GNAT domain MC28_2893 d71e6cea2a027a40abfd33bc8efe9019 155 Gene3D G3DSA:3.40.630.30 1 155 1.7E-39 T 14-10-2018 MC28_C056 62b96bc0fad6804d5c19601d719ac7bb 92 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.0E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_C056 62b96bc0fad6804d5c19601d719ac7bb 92 Gene3D G3DSA:4.10.520.10 1 92 3.3E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_C056 62b96bc0fad6804d5c19601d719ac7bb 92 SUPERFAMILY SSF47729 1 90 3.24E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_C056 62b96bc0fad6804d5c19601d719ac7bb 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MC28_C056 62b96bc0fad6804d5c19601d719ac7bb 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_C056 62b96bc0fad6804d5c19601d719ac7bb 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_C056 62b96bc0fad6804d5c19601d719ac7bb 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_C056 62b96bc0fad6804d5c19601d719ac7bb 92 SMART SM00411 1 90 9.6E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_4770 82f5a875e7ca0c18da881587d1989662 792 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 698 757 9.6E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core MC28_4770 82f5a875e7ca0c18da881587d1989662 792 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 561 634 2.9E-28 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core MC28_4770 82f5a875e7ca0c18da881587d1989662 792 Pfam PF01943 Polysaccharide biosynthesis protein 9 307 9.7E-37 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 MC28_4770 82f5a875e7ca0c18da881587d1989662 792 TIGRFAM TIGR00444 mazG: MazG family protein 545 788 5.0E-101 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG MC28_4770 82f5a875e7ca0c18da881587d1989662 792 SUPERFAMILY SSF101386 538 639 1.13E-24 T 14-10-2018 MC28_4770 82f5a875e7ca0c18da881587d1989662 792 SUPERFAMILY SSF101386 668 766 2.45E-22 T 14-10-2018 MC28_4770 82f5a875e7ca0c18da881587d1989662 792 Gene3D G3DSA:1.10.287.1080 535 658 4.5E-45 T 14-10-2018 MC28_4770 82f5a875e7ca0c18da881587d1989662 792 SUPERFAMILY SSF53790 456 569 2.01E-7 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 MC28_4770 82f5a875e7ca0c18da881587d1989662 792 Gene3D G3DSA:1.10.287.1080 662 791 1.3E-43 T 14-10-2018 MC28_5285 54487f34390a9089ec7f505c8af76421 149 SUPERFAMILY SSF160387 32 141 9.42E-28 T 14-10-2018 MC28_5285 54487f34390a9089ec7f505c8af76421 149 Pfam PF05573 NosL 2 127 3.6E-18 T 14-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL MC28_0028 671b1f9b3477e84466f14f31329ee82b 495 SMART SM00382 280 466 2.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0028 671b1f9b3477e84466f14f31329ee82b 495 SMART SM00382 29 220 3.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0028 671b1f9b3477e84466f14f31329ee82b 495 SUPERFAMILY SSF52540 5 233 7.21E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0028 671b1f9b3477e84466f14f31329ee82b 495 Gene3D G3DSA:3.40.50.300 2 249 5.4E-53 T 14-10-2018 MC28_0028 671b1f9b3477e84466f14f31329ee82b 495 Gene3D G3DSA:3.40.50.300 267 489 1.4E-36 T 14-10-2018 MC28_0028 671b1f9b3477e84466f14f31329ee82b 495 SUPERFAMILY SSF52540 271 476 2.07E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0028 671b1f9b3477e84466f14f31329ee82b 495 Pfam PF00005 ABC transporter 273 417 3.3E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0028 671b1f9b3477e84466f14f31329ee82b 495 Pfam PF00005 ABC transporter 20 172 9.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3303 41a19153d1313a379ab08d2947676b66 419 SUPERFAMILY SSF53850 42 407 1.5E-93 T 14-10-2018 MC28_3303 41a19153d1313a379ab08d2947676b66 419 Gene3D G3DSA:3.40.190.10 147 403 2.1E-114 T 14-10-2018 MC28_3303 41a19153d1313a379ab08d2947676b66 419 Gene3D G3DSA:3.40.190.10 59 370 2.1E-114 T 14-10-2018 MC28_3303 41a19153d1313a379ab08d2947676b66 419 Pfam PF13416 Bacterial extracellular solute-binding protein 56 357 9.1E-57 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein MC28_3303 41a19153d1313a379ab08d2947676b66 419 PRINTS PR00181 Maltose binding protein signature 138 157 5.2E-6 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 MC28_3303 41a19153d1313a379ab08d2947676b66 419 PRINTS PR00181 Maltose binding protein signature 78 96 5.2E-6 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 MC28_3303 41a19153d1313a379ab08d2947676b66 419 PRINTS PR00181 Maltose binding protein signature 159 178 5.2E-6 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 MC28_3303 41a19153d1313a379ab08d2947676b66 419 PRINTS PR00181 Maltose binding protein signature 245 264 5.2E-6 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 MC28_3303 41a19153d1313a379ab08d2947676b66 419 PRINTS PR00181 Maltose binding protein signature 370 389 5.2E-6 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 MC28_G080 fbe0c3bbafb38e8c7f3d4cf6797d6123 163 SUPERFAMILY SSF55729 4 157 1.1E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_G080 fbe0c3bbafb38e8c7f3d4cf6797d6123 163 Gene3D G3DSA:3.40.630.30 6 161 1.2E-23 T 14-10-2018 MC28_G080 fbe0c3bbafb38e8c7f3d4cf6797d6123 163 Pfam PF00583 Acetyltransferase (GNAT) family 48 150 8.5E-7 T 14-10-2018 IPR000182 GNAT domain MC28_2588 dac6cfaa7f009c1f02be06b190db057d 257 SUPERFAMILY SSF56281 46 256 4.59E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_2588 dac6cfaa7f009c1f02be06b190db057d 257 Gene3D G3DSA:3.60.15.10 26 257 1.0E-81 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_2588 dac6cfaa7f009c1f02be06b190db057d 257 Pfam PF00753 Metallo-beta-lactamase superfamily 69 227 2.3E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2588 dac6cfaa7f009c1f02be06b190db057d 257 ProSitePatterns PS00744 Beta-lactamases class B signature 2. 189 201 - T 14-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 MC28_2588 dac6cfaa7f009c1f02be06b190db057d 257 SMART SM00849 70 240 5.2E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_B41 dc7b2c456764e3d9f23272dde9751186 114 Gene3D G3DSA:1.10.260.40 1 79 2.8E-20 T 14-10-2018 MC28_B41 dc7b2c456764e3d9f23272dde9751186 114 SMART SM00530 7 62 4.5E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_B41 dc7b2c456764e3d9f23272dde9751186 114 Pfam PF12844 Helix-turn-helix domain 5 68 8.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_B41 dc7b2c456764e3d9f23272dde9751186 114 SUPERFAMILY SSF47413 1 70 6.17E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 Gene3D G3DSA:3.40.1410.10 74 228 1.0E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 8.5E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 SUPERFAMILY SSF46785 4 71 1.26E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 Gene3D G3DSA:1.10.10.10 1 67 2.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 SMART SM00345 8 67 2.8E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 SUPERFAMILY SSF64288 77 229 1.52E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 SMART SM00866 90 227 2.7E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_2928 ca297576d9bf5e5d424f15d862e673f9 235 Pfam PF07702 UTRA domain 92 226 1.9E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_F015 9ccd44446401cd5fb95c93cbc5dee1f9 42 Pfam PF17332 Uncharacterized protein pXO2-11 2 39 1.3E-7 T 14-10-2018 IPR020275 Uncharacterised protein family, plasmid pXO2-11 MC28_E001 9ccd44446401cd5fb95c93cbc5dee1f9 42 Pfam PF17332 Uncharacterized protein pXO2-11 2 39 1.3E-7 T 14-10-2018 IPR020275 Uncharacterised protein family, plasmid pXO2-11 MC28_5231 c9a5bb095612e7d7b485d26ab8700539 526 SUPERFAMILY SSF53448 271 431 9.91E-16 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_5231 c9a5bb095612e7d7b485d26ab8700539 526 Gene3D G3DSA:3.90.550.10 5 216 2.0E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_5231 c9a5bb095612e7d7b485d26ab8700539 526 Gene3D G3DSA:3.90.550.10 259 476 1.7E-14 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_5231 c9a5bb095612e7d7b485d26ab8700539 526 Pfam PF00535 Glycosyl transferase family 2 15 120 2.2E-21 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_5231 c9a5bb095612e7d7b485d26ab8700539 526 Pfam PF00535 Glycosyl transferase family 2 273 375 3.2E-10 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_5231 c9a5bb095612e7d7b485d26ab8700539 526 SUPERFAMILY SSF53448 10 193 1.17E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1698 19b8b06d29b02fdd61802716f38860e8 92 Gene3D G3DSA:2.10.260.10 1 54 1.4E-21 T 14-10-2018 MC28_1698 19b8b06d29b02fdd61802716f38860e8 92 SUPERFAMILY SSF89447 1 50 6.8E-14 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily MC28_1698 19b8b06d29b02fdd61802716f38860e8 92 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 52 1.9E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_1698 19b8b06d29b02fdd61802716f38860e8 92 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 9 48 1.4E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_1698 19b8b06d29b02fdd61802716f38860e8 92 SMART SM00966 8 51 1.8E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_3361 52fb896d4637a7fab20440edd3b5049a 138 Pfam PF13782 Stage V sporulation protein AB 26 134 3.2E-35 T 14-10-2018 IPR020144 Stage V sporulation protein AB MC28_3361 52fb896d4637a7fab20440edd3b5049a 138 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 1 138 2.0E-58 T 14-10-2018 IPR020144 Stage V sporulation protein AB MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Gene3D G3DSA:2.30.30.40 591 659 6.9E-19 T 14-10-2018 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Gene3D G3DSA:1.10.530.10 853 972 6.2E-15 T 14-10-2018 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SMART SM00287 279 341 1.1E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SMART SM00287 30 91 2.9E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SMART SM00287 110 172 5.3E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SMART SM00287 357 419 1.2E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SMART SM00287 513 575 6.6E-17 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SMART SM00287 591 652 1.8E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SMART SM00287 435 497 3.8E-16 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SMART SM00287 194 256 7.5E-16 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SMART SM00047 843 978 2.7E-10 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Pfam PF08239 Bacterial SH3 domain 522 571 2.1E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Pfam PF08239 Bacterial SH3 domain 444 493 1.9E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Pfam PF08239 Bacterial SH3 domain 366 415 1.6E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Pfam PF08239 Bacterial SH3 domain 203 252 2.3E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Pfam PF08239 Bacterial SH3 domain 39 85 1.7E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Pfam PF08239 Bacterial SH3 domain 288 337 2.7E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Pfam PF08239 Bacterial SH3 domain 601 650 3.7E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Pfam PF08239 Bacterial SH3 domain 119 168 2.7E-13 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 856 971 6.4E-18 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Gene3D G3DSA:2.30.30.40 111 168 5.6E-18 T 14-10-2018 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Gene3D G3DSA:2.30.30.40 436 493 1.5E-20 T 14-10-2018 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Gene3D G3DSA:2.30.30.40 195 252 3.1E-20 T 14-10-2018 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Gene3D G3DSA:2.30.30.40 280 337 5.1E-20 T 14-10-2018 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Gene3D G3DSA:2.30.30.40 31 88 1.7E-16 T 14-10-2018 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Gene3D G3DSA:2.30.30.40 358 415 2.6E-20 T 14-10-2018 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 Gene3D G3DSA:2.30.30.40 514 571 1.4E-20 T 14-10-2018 MC28_5122 d357360b25485df3e77233d1a30958fa 1050 SUPERFAMILY SSF50044 617 659 4.05E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 MC28_2330 0e2535e03bd6c0ec19fc876e2e1ebfe1 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 32 43 1.5E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2330 0e2535e03bd6c0ec19fc876e2e1ebfe1 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.5E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2330 0e2535e03bd6c0ec19fc876e2e1ebfe1 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.5E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2330 0e2535e03bd6c0ec19fc876e2e1ebfe1 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 1.5E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2330 0e2535e03bd6c0ec19fc876e2e1ebfe1 101 Gene3D G3DSA:1.10.10.10 2 90 5.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2330 0e2535e03bd6c0ec19fc876e2e1ebfe1 101 SUPERFAMILY SSF46785 5 85 3.88E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2330 0e2535e03bd6c0ec19fc876e2e1ebfe1 101 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 34 52 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 MC28_2330 0e2535e03bd6c0ec19fc876e2e1ebfe1 101 SMART SM00418 10 89 1.9E-30 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2330 0e2535e03bd6c0ec19fc876e2e1ebfe1 101 Pfam PF01022 Bacterial regulatory protein, arsR family 17 62 5.4E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3114 92aa2fda15d4070aca9f6b557c8aabc6 180 SUPERFAMILY SSF53271 6 174 3.8E-44 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_3114 92aa2fda15d4070aca9f6b557c8aabc6 180 Gene3D G3DSA:3.40.50.2020 1 180 6.0E-63 T 14-10-2018 MC28_3114 92aa2fda15d4070aca9f6b557c8aabc6 180 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 179 39.353 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 MC28_3114 92aa2fda15d4070aca9f6b557c8aabc6 180 Pfam PF00156 Phosphoribosyl transferase domain 8 163 1.1E-20 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 MC28_2887 f384b50d57c9baee5783fe8fe7fe5067 449 PIRSF PIRSF006060 1 448 4.3E-72 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_2887 f384b50d57c9baee5783fe8fe7fe5067 449 Gene3D G3DSA:1.20.1740.10 1 446 7.7E-69 T 14-10-2018 MC28_2887 f384b50d57c9baee5783fe8fe7fe5067 449 ProSitePatterns PS00218 Amino acid permeases signature. 23 53 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 MC28_2887 f384b50d57c9baee5783fe8fe7fe5067 449 Pfam PF00324 Amino acid permease 1 436 2.0E-118 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_5039 515c3292a9a890fb8dc797d23ffed327 472 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 275 312 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_5039 515c3292a9a890fb8dc797d23ffed327 472 SUPERFAMILY SSF53383 53 461 6.7E-138 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_5039 515c3292a9a890fb8dc797d23ffed327 472 Gene3D G3DSA:3.40.640.10 91 358 5.5E-167 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_5039 515c3292a9a890fb8dc797d23ffed327 472 PIRSF PIRSF000521 3 162 3.6E-11 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_5039 515c3292a9a890fb8dc797d23ffed327 472 PIRSF PIRSF000521 155 463 2.5E-41 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_5039 515c3292a9a890fb8dc797d23ffed327 472 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 42 461 2.0E-197 T 14-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 MC28_5039 515c3292a9a890fb8dc797d23ffed327 472 Gene3D G3DSA:3.90.1150.10 38 456 5.5E-167 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_5039 515c3292a9a890fb8dc797d23ffed327 472 Pfam PF00202 Aminotransferase class-III 56 458 4.1E-135 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_0089 32f11b6d5a38163a9357acb8da22d548 114 Pfam PF13157 Protein of unknown function (DUF3992) 21 109 9.4E-35 T 14-10-2018 IPR025055 Protein of unknown function DUF3992 MC28_F082 431499a7e173d35eef37b2179532d754 502 SMART SM00857 10 160 4.9E-29 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_F082 431499a7e173d35eef37b2179532d754 502 SUPERFAMILY SSF53041 9 159 2.49E-23 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_F082 431499a7e173d35eef37b2179532d754 502 Pfam PF00239 Resolvase, N terminal domain 11 159 1.7E-30 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_F082 431499a7e173d35eef37b2179532d754 502 Pfam PF07508 Recombinase 182 269 5.1E-7 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 MC28_F082 431499a7e173d35eef37b2179532d754 502 Gene3D G3DSA:3.40.50.1390 6 142 1.3E-23 T 14-10-2018 MC28_F082 431499a7e173d35eef37b2179532d754 502 Gene3D G3DSA:1.10.10.2600 144 276 1.8E-9 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily MC28_5436 83549fb9446333c7cdf6af3351387f07 380 Gene3D G3DSA:3.30.300.210 222 374 1.8E-34 T 14-10-2018 IPR038501 Spore germination GerAC superfamily MC28_5436 83549fb9446333c7cdf6af3351387f07 380 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 204 372 1.8E-33 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_5436 83549fb9446333c7cdf6af3351387f07 380 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 373 6.9E-100 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_4446 9f2d1986d82a129ab0438083aeafa7be 253 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 1 221 18.285 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 MC28_4446 9f2d1986d82a129ab0438083aeafa7be 253 Gene3D G3DSA:3.40.50.150 9 239 3.8E-54 T 14-10-2018 MC28_4446 9f2d1986d82a129ab0438083aeafa7be 253 Pfam PF01564 Spermine/spermidine synthase domain 12 190 3.3E-34 T 14-10-2018 MC28_4446 9f2d1986d82a129ab0438083aeafa7be 253 SUPERFAMILY SSF53335 1 195 9.1E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4446 9f2d1986d82a129ab0438083aeafa7be 253 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 33 46 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 MC28_4866 5998876dddfb98993f2bdcce570a5c2f 273 Gene3D G3DSA:3.40.1700.10 101 254 2.5E-60 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily MC28_4866 5998876dddfb98993f2bdcce570a5c2f 273 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 118 236 1.5E-43 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal MC28_4866 5998876dddfb98993f2bdcce570a5c2f 273 SUPERFAMILY SSF143597 40 240 1.7E-69 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily MC28_4866 5998876dddfb98993f2bdcce570a5c2f 273 PIRSF PIRSF004793 3 269 4.0E-99 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 MC28_4866 5998876dddfb98993f2bdcce570a5c2f 273 Hamap MF_01499 Diadenylate cyclase [dacA]. 8 254 33.768 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 MC28_4866 5998876dddfb98993f2bdcce570a5c2f 273 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 3 255 1.2E-95 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 MC28_2550 9d8f2b929ac1b131fc37e676063cf028 247 Gene3D G3DSA:3.40.1410.10 92 234 1.4E-32 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_2550 9d8f2b929ac1b131fc37e676063cf028 247 SUPERFAMILY SSF46785 9 78 4.12E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2550 9d8f2b929ac1b131fc37e676063cf028 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 5.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2550 9d8f2b929ac1b131fc37e676063cf028 247 Gene3D G3DSA:1.10.10.10 11 77 6.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2550 9d8f2b929ac1b131fc37e676063cf028 247 SMART SM00345 15 74 9.2E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2550 9d8f2b929ac1b131fc37e676063cf028 247 SMART SM00866 95 234 1.1E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_2550 9d8f2b929ac1b131fc37e676063cf028 247 Pfam PF07702 UTRA domain 97 233 1.4E-27 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MC28_2550 9d8f2b929ac1b131fc37e676063cf028 247 SUPERFAMILY SSF64288 62 239 2.71E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_1282 e9ebce335413cc6309a0429f5ca22fd6 491 SUPERFAMILY SSF75304 12 488 1.01E-102 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_1282 e9ebce335413cc6309a0429f5ca22fd6 491 Gene3D G3DSA:3.90.1300.10 2 490 2.0E-166 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_1282 e9ebce335413cc6309a0429f5ca22fd6 491 Pfam PF01425 Amidase 31 469 1.2E-75 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_1012 14ef6ff0f7d1a2fe0b1f827d16403c98 270 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 17 236 9.0E-87 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related MC28_1012 14ef6ff0f7d1a2fe0b1f827d16403c98 270 PIRSF PIRSF028756 2 266 1.2E-78 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 MC28_1012 14ef6ff0f7d1a2fe0b1f827d16403c98 270 SUPERFAMILY SSF52540 48 241 8.57E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1012 14ef6ff0f7d1a2fe0b1f827d16403c98 270 Gene3D G3DSA:3.40.50.300 1 239 2.3E-99 T 14-10-2018 MC28_0933 44f80824de64ddb74c59b0666bf5c500 551 SUPERFAMILY SSF161098 289 546 5.79E-42 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0933 44f80824de64ddb74c59b0666bf5c500 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 363 547 5.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0933 44f80824de64ddb74c59b0666bf5c500 551 Gene3D G3DSA:1.10.3720.10 6 270 2.0E-44 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0933 44f80824de64ddb74c59b0666bf5c500 551 Gene3D G3DSA:1.10.3720.10 286 549 1.4E-38 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0933 44f80824de64ddb74c59b0666bf5c500 551 SUPERFAMILY SSF161098 6 266 7.3E-39 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0688 3f43e4645c33634059740b083e5c1f38 332 Pfam PF01384 Phosphate transporter family 22 320 2.7E-90 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 MC28_3210 4960f5aeeaa06107818c7d0e5754d1fb 393 Pfam PF05636 HIGH Nucleotidyl Transferase 2 367 3.1E-120 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 MC28_3210 4960f5aeeaa06107818c7d0e5754d1fb 393 Gene3D G3DSA:3.40.50.620 1 224 8.8E-26 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3210 4960f5aeeaa06107818c7d0e5754d1fb 393 Hamap MF_01539 UPF0348 protein . 1 384 34.111 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 MC28_3210 4960f5aeeaa06107818c7d0e5754d1fb 393 SUPERFAMILY SSF52374 5 217 4.5E-9 T 14-10-2018 MC28_1092 a498dae68f8de4c35cc1dacd7efa9449 280 SUPERFAMILY SSF52540 29 249 1.32E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1092 a498dae68f8de4c35cc1dacd7efa9449 280 Gene3D G3DSA:3.40.50.300 26 267 1.7E-64 T 14-10-2018 MC28_1092 a498dae68f8de4c35cc1dacd7efa9449 280 Pfam PF00005 ABC transporter 50 197 1.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1092 a498dae68f8de4c35cc1dacd7efa9449 280 SMART SM00382 58 246 9.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3994 1b0d404306279ac1d019a3d5d1d7c079 164 Pfam PF02559 CarD-like/TRCF domain 7 115 2.8E-21 T 14-10-2018 IPR003711 CarD-like/TRCF domain MC28_3994 1b0d404306279ac1d019a3d5d1d7c079 164 Gene3D G3DSA:2.30.30.840 2 67 5.5E-27 T 14-10-2018 MC28_3994 1b0d404306279ac1d019a3d5d1d7c079 164 SUPERFAMILY SSF141259 7 70 2.35E-14 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily MC28_3994 1b0d404306279ac1d019a3d5d1d7c079 164 Gene3D G3DSA:1.20.58.1290 68 164 9.2E-29 T 14-10-2018 MC28_3994 1b0d404306279ac1d019a3d5d1d7c079 164 SMART SM01058 6 116 4.7E-36 T 14-10-2018 IPR003711 CarD-like/TRCF domain MC28_1396 92e7935c74d2a87bdf595d3cd50fd0f5 191 Pfam PF06042 Nucleotidyltransferase 25 186 1.3E-58 T 14-10-2018 IPR009267 Putative nucleotidyltransferase MC28_D164 ff6c8995fcbca35b07f0ef9a314478d6 235 SUPERFAMILY SSF53098 72 191 2.28E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_D164 ff6c8995fcbca35b07f0ef9a314478d6 235 Gene3D G3DSA:3.30.420.10 60 229 1.8E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_D164 ff6c8995fcbca35b07f0ef9a314478d6 235 Pfam PF13610 DDE domain 74 212 3.8E-50 T 14-10-2018 IPR032874 DDE domain MC28_2001 43c997983816c4bd509458130fbc7c85 110 Gene3D G3DSA:3.20.170.20 1 109 1.3E-27 T 14-10-2018 MC28_2001 43c997983816c4bd509458130fbc7c85 110 SUPERFAMILY SSF56399 2 104 2.76E-26 T 14-10-2018 MC28_2001 43c997983816c4bd509458130fbc7c85 110 Pfam PF06108 Protein of unknown function (DUF952) 6 93 5.1E-21 T 14-10-2018 IPR009297 Protein of unknown function DUF952 MC28_3422 1683c9160bc9f3770cf6e0e4f5f640c0 255 Gene3D G3DSA:3.40.1160.10 2 253 7.4E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_3422 1683c9160bc9f3770cf6e0e4f5f640c0 255 Pfam PF00696 Amino acid kinase family 5 231 7.7E-44 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 MC28_3422 1683c9160bc9f3770cf6e0e4f5f640c0 255 Hamap MF_00082 Acetylglutamate kinase [argB]. 2 247 41.642 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 MC28_3422 1683c9160bc9f3770cf6e0e4f5f640c0 255 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 229 3.6E-72 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 MC28_3422 1683c9160bc9f3770cf6e0e4f5f640c0 255 PIRSF PIRSF000728 1 250 8.2E-86 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 MC28_3422 1683c9160bc9f3770cf6e0e4f5f640c0 255 SUPERFAMILY SSF53633 2 250 1.13E-63 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_1189 4c4841e06c20607de18d4027a513becf 280 Pfam PF01261 Xylose isomerase-like TIM barrel 22 232 7.5E-27 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain MC28_1189 4c4841e06c20607de18d4027a513becf 280 Gene3D G3DSA:3.20.20.150 1 280 2.7E-82 T 14-10-2018 MC28_1189 4c4841e06c20607de18d4027a513becf 280 SUPERFAMILY SSF51658 1 258 3.32E-44 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily MC28_0642 f4d562a19cbcbd5f1852a03ca14b367b 211 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 184 2.1E-63 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 MC28_0642 f4d562a19cbcbd5f1852a03ca14b367b 211 SUPERFAMILY SSF53850 3 206 1.33E-66 T 14-10-2018 MC28_0642 f4d562a19cbcbd5f1852a03ca14b367b 211 Gene3D G3DSA:3.40.190.10 94 176 1.0E-76 T 14-10-2018 MC28_0642 f4d562a19cbcbd5f1852a03ca14b367b 211 Gene3D G3DSA:3.40.190.10 6 196 1.0E-76 T 14-10-2018 MC28_0642 f4d562a19cbcbd5f1852a03ca14b367b 211 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 3 208 59.672 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 MC28_0642 f4d562a19cbcbd5f1852a03ca14b367b 211 Pfam PF01634 ATP phosphoribosyltransferase 53 204 2.8E-51 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 MC28_0598 500e4eeb006c35b6f20fa58849d6fc11 60 Pfam PF13052 Protein of unknown function (DUF3913) 2 58 1.2E-43 T 14-10-2018 IPR025024 Protein of unknown function DUF3913 MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 Gene3D G3DSA:1.10.275.10 1 136 6.5E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 Gene3D G3DSA:1.20.200.10 137 404 3.3E-109 T 14-10-2018 MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 Pfam PF10415 Fumarase C C-terminus 406 458 4.7E-28 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 460 92.139 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 Pfam PF00206 Lyase 11 340 2.5E-116 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 4.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 4.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 4.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 4.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 SUPERFAMILY SSF48557 3 458 2.36E-154 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 Gene3D G3DSA:1.10.40.30 406 461 6.0E-30 T 14-10-2018 MC28_0963 458f4bce7d5f2b50134ba5a934e9b86f 462 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 459 4.9E-235 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_1290 c254a25bfd9598f4a5ea7c8bd3423bf0 399 Pfam PF07690 Major Facilitator Superfamily 23 331 4.2E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1290 c254a25bfd9598f4a5ea7c8bd3423bf0 399 Gene3D G3DSA:1.20.1250.20 11 392 7.2E-55 T 14-10-2018 MC28_1290 c254a25bfd9598f4a5ea7c8bd3423bf0 399 SUPERFAMILY SSF103473 10 392 8.5E-65 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4712 2224bbbbbb9fa272be6ca8a9573da5e3 253 Gene3D G3DSA:3.40.50.300 1 252 1.0E-83 T 14-10-2018 MC28_4712 2224bbbbbb9fa272be6ca8a9573da5e3 253 Pfam PF13614 AAA domain 2 178 1.6E-74 T 14-10-2018 IPR025669 AAA domain MC28_4712 2224bbbbbb9fa272be6ca8a9573da5e3 253 PIRSF PIRSF009320 2 84 1.9E-14 T 14-10-2018 MC28_4712 2224bbbbbb9fa272be6ca8a9573da5e3 253 PIRSF PIRSF009320 55 251 1.7E-8 T 14-10-2018 MC28_4712 2224bbbbbb9fa272be6ca8a9573da5e3 253 SUPERFAMILY SSF52540 1 250 2.52E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2055 4d96141bf376c2c12fb587d56f2d89e7 529 Gene3D G3DSA:1.10.1370.20 159 529 3.7E-91 T 14-10-2018 MC28_2055 4d96141bf376c2c12fb587d56f2d89e7 529 SUPERFAMILY SSF55486 65 527 1.43E-70 T 14-10-2018 MC28_2055 4d96141bf376c2c12fb587d56f2d89e7 529 Pfam PF01432 Peptidase family M3 266 515 5.0E-13 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 MC28_0537 a93f868b1e84d2447caf7e683fd98efd 283 Gene3D G3DSA:1.20.1080.10 2 264 4.1E-83 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_0537 a93f868b1e84d2447caf7e683fd98efd 283 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 76 85 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site MC28_0537 a93f868b1e84d2447caf7e683fd98efd 283 Pfam PF01226 Formate/nitrite transporter 10 251 5.0E-68 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 MC28_0537 a93f868b1e84d2447caf7e683fd98efd 283 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 160 170 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 SUPERFAMILY SSF82679 2 114 2.35E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 Pfam PF00467 KOW motif 129 158 4.0E-5 T 14-10-2018 IPR005824 KOW MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 Gene3D G3DSA:2.30.30.30 119 177 9.8E-24 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 2.1E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 2.1E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.1E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 Pfam PF02357 Transcription termination factor nusG 3 109 1.1E-28 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 2.3E-65 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 SUPERFAMILY SSF50104 121 177 1.35E-18 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 Gene3D G3DSA:3.30.70.940 1 118 1.5E-44 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 SMART SM00738 2 113 1.4E-51 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 MC28_4808 ad72d37b1d4c6a8c3b72e1751fde1235 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 29.299 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 MC28_3471 29e95a63b1163e343d53ab6e4f2f4bbb 76 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 47 2.0E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MC28_3471 29e95a63b1163e343d53ab6e4f2f4bbb 76 Gene3D G3DSA:1.10.287.1040 1 75 5.8E-22 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 MC28_3471 29e95a63b1163e343d53ab6e4f2f4bbb 76 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 6 66 15.072 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MC28_3471 29e95a63b1163e343d53ab6e4f2f4bbb 76 Pfam PF02609 Exonuclease VII small subunit 7 57 3.2E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MC28_3471 29e95a63b1163e343d53ab6e4f2f4bbb 76 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 61 4.6E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MC28_3471 29e95a63b1163e343d53ab6e4f2f4bbb 76 PIRSF PIRSF006488 1 76 5.3E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MC28_3471 29e95a63b1163e343d53ab6e4f2f4bbb 76 SUPERFAMILY SSF116842 3 66 4.05E-21 T 14-10-2018 MC28_1346 8a744e72be9dda1caa19fb7616516c1e 337 Gene3D G3DSA:3.40.50.720 1 248 8.6E-76 T 14-10-2018 MC28_1346 8a744e72be9dda1caa19fb7616516c1e 337 Pfam PF00899 ThiF family 5 240 9.2E-63 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MC28_1346 8a744e72be9dda1caa19fb7616516c1e 337 SUPERFAMILY SSF69572 3 328 5.62E-88 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 MC28_0320 1d90136bd4fa6db990946e4df242dc75 55 Gene3D G3DSA:1.10.10.10 1 41 5.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0320 1d90136bd4fa6db990946e4df242dc75 55 Pfam PF08279 HTH domain 6 37 2.5E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 MC28_2640 c248a77a439c4b852c77e4a2df31798e 257 Gene3D G3DSA:3.20.80.10 105 254 1.2E-18 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_2640 c248a77a439c4b852c77e4a2df31798e 257 Gene3D G3DSA:1.10.1660.10 1 104 2.5E-16 T 14-10-2018 MC28_2640 c248a77a439c4b852c77e4a2df31798e 257 SUPERFAMILY SSF55136 106 255 3.92E-12 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_2640 c248a77a439c4b852c77e4a2df31798e 257 Pfam PF13411 MerR HTH family regulatory protein 2 55 5.9E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_2640 c248a77a439c4b852c77e4a2df31798e 257 SUPERFAMILY SSF46955 1 90 1.54E-15 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_2640 c248a77a439c4b852c77e4a2df31798e 257 SMART SM00871 104 254 3.8E-8 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding MC28_2693 9aa848147eb7a3fdefdefca605e29ac0 116 Pfam PF04266 ASCH domain 9 115 9.7E-16 T 14-10-2018 IPR007374 ASCH domain MC28_2693 9aa848147eb7a3fdefdefca605e29ac0 116 SMART SM01022 8 116 3.5E-15 T 14-10-2018 IPR007374 ASCH domain MC28_2693 9aa848147eb7a3fdefdefca605e29ac0 116 Gene3D G3DSA:2.30.130.30 4 116 1.4E-31 T 14-10-2018 MC28_2693 9aa848147eb7a3fdefdefca605e29ac0 116 PIRSF PIRSF016134 4 116 1.9E-44 T 14-10-2018 IPR016645 Uncharacterised conserved protein UCP016134 MC28_2693 9aa848147eb7a3fdefdefca605e29ac0 116 SUPERFAMILY SSF88697 4 115 9.28E-36 T 14-10-2018 IPR015947 PUA-like superfamily MC28_2902 d671e7340dab5c37a9cf2b2c83e2b631 330 Gene3D G3DSA:1.10.3470.10 1 330 7.1E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_2902 d671e7340dab5c37a9cf2b2c83e2b631 330 Pfam PF01032 FecCD transport family 9 327 3.8E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_2902 d671e7340dab5c37a9cf2b2c83e2b631 330 SUPERFAMILY SSF81345 3 327 2.09E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_F194 88490bde12cea03182bc940727603984 282 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 275 8.7E-93 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 MC28_F194 88490bde12cea03182bc940727603984 282 SUPERFAMILY SSF51735 1 279 1.83E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_F194 88490bde12cea03182bc940727603984 282 Gene3D G3DSA:3.40.50.720 3 266 1.7E-105 T 14-10-2018 MC28_F194 88490bde12cea03182bc940727603984 282 Pfam PF04321 RmlD substrate binding domain 1 279 1.4E-94 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 MC28_F194 88490bde12cea03182bc940727603984 282 Gene3D G3DSA:3.90.25.10 159 272 1.7E-105 T 14-10-2018 MC28_4084 26e458952de737b449cce8b9ea3a019f 77 Pfam PF10676 Spore germination protein gerPA/gerPF 7 75 2.2E-20 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF MC28_1879 5421d8f6efa85676fc1114584d852ee4 332 SUPERFAMILY SSF56601 3 314 1.99E-52 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1879 5421d8f6efa85676fc1114584d852ee4 332 Pfam PF00144 Beta-lactamase 14 310 1.1E-34 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_1879 5421d8f6efa85676fc1114584d852ee4 332 Gene3D G3DSA:3.40.710.10 3 311 1.6E-50 T 14-10-2018 MC28_4246 21b9b4c5e98f97369626c3c87bf58034 430 SUPERFAMILY SSF101960 11 429 1.57E-117 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily MC28_4246 21b9b4c5e98f97369626c3c87bf58034 430 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 147 420 2.7E-75 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 MC28_4246 21b9b4c5e98f97369626c3c87bf58034 430 Pfam PF01458 Uncharacterized protein family (UPF0051) 181 404 2.2E-61 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 MC28_1881 ce6dd56736b32adf926e3e6e5c17a9d6 402 Gene3D G3DSA:1.20.1250.20 1 394 3.2E-42 T 14-10-2018 MC28_1881 ce6dd56736b32adf926e3e6e5c17a9d6 402 SUPERFAMILY SSF103473 8 391 7.72E-49 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1881 ce6dd56736b32adf926e3e6e5c17a9d6 402 Pfam PF07690 Major Facilitator Superfamily 19 316 5.8E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_3823 c95fdae057346299af7e9c1c15a3d3f6 254 PIRSF PIRSF030150 7 252 1.0E-104 T 14-10-2018 IPR015986 Sortase B, Firmicutes MC28_3823 c95fdae057346299af7e9c1c15a3d3f6 254 TIGRFAM TIGR03064 sortase_srtB: sortase, SrtB family 11 246 4.8E-100 T 14-10-2018 IPR009835 Sortase B family MC28_3823 c95fdae057346299af7e9c1c15a3d3f6 254 Gene3D G3DSA:2.40.260.10 33 254 2.1E-82 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_3823 c95fdae057346299af7e9c1c15a3d3f6 254 SUPERFAMILY SSF63817 21 253 1.01E-88 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_3823 c95fdae057346299af7e9c1c15a3d3f6 254 Pfam PF04203 Sortase family 85 251 1.8E-23 T 14-10-2018 IPR005754 Sortase family MC28_2626 dd60463a88bdf7431cb8855c8187a63a 160 Gene3D G3DSA:1.20.120.450 5 159 1.0E-15 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2626 dd60463a88bdf7431cb8855c8187a63a 160 Pfam PF12867 DinB superfamily 18 150 1.2E-20 T 14-10-2018 IPR024775 DinB-like domain MC28_2626 dd60463a88bdf7431cb8855c8187a63a 160 SUPERFAMILY SSF109854 16 157 2.01E-25 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_5394 49ae1b9b198027cd4cece8fb96af37d2 799 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 188 497 1.4E-85 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 MC28_5394 49ae1b9b198027cd4cece8fb96af37d2 799 Pfam PF05547 Immune inhibitor A peptidase M6 153 795 0.0 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 MC28_5394 49ae1b9b198027cd4cece8fb96af37d2 799 PIRSF PIRSF007519 1 799 0.0 T 14-10-2018 IPR012300 Peptidase M6, InhA MC28_5394 49ae1b9b198027cd4cece8fb96af37d2 799 SUPERFAMILY SSF55486 266 435 1.82E-17 T 14-10-2018 MC28_3086 e91d53098504b787c2f4b6fdef23d42e 247 SMART SM00332 1 237 2.1E-20 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_3086 e91d53098504b787c2f4b6fdef23d42e 247 Pfam PF13672 Protein phosphatase 2C 9 198 6.4E-21 T 14-10-2018 MC28_3086 e91d53098504b787c2f4b6fdef23d42e 247 SMART SM00331 4 239 3.3E-43 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_3086 e91d53098504b787c2f4b6fdef23d42e 247 Gene3D G3DSA:3.60.40.10 1 241 1.2E-69 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_3086 e91d53098504b787c2f4b6fdef23d42e 247 SUPERFAMILY SSF81606 2 238 4.19E-63 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_1190 cd19bfe0c1d78bc79ed507244e1e2775 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 9 62 2.8E-21 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 MC28_1190 cd19bfe0c1d78bc79ed507244e1e2775 68 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_1190 cd19bfe0c1d78bc79ed507244e1e2775 68 Gene3D G3DSA:1.10.8.910 8 68 1.6E-29 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily MC28_1190 cd19bfe0c1d78bc79ed507244e1e2775 68 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_2504 16810fd643c66efef981bec5cb5d4c63 353 SUPERFAMILY SSF53335 13 198 1.09E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2504 16810fd643c66efef981bec5cb5d4c63 353 Gene3D G3DSA:3.40.50.150 6 200 1.4E-45 T 14-10-2018 MC28_2504 16810fd643c66efef981bec5cb5d4c63 353 Pfam PF13489 Methyltransferase domain 32 182 1.8E-14 T 14-10-2018 MC28_2504 16810fd643c66efef981bec5cb5d4c63 353 Pfam PF08484 C-methyltransferase C-terminal domain 189 346 8.9E-62 T 14-10-2018 IPR013691 C-methyltransferase MC28_2504 16810fd643c66efef981bec5cb5d4c63 353 Gene3D G3DSA:3.40.50.720 254 353 4.4E-41 T 14-10-2018 MC28_5264 8ae5adfa9c6f74e96d4fb31335fe49c4 44 Pfam PF13024 Protein of unknown function (DUF3884) 5 34 8.8E-9 T 14-10-2018 IPR024979 Protein of unknown function DUF3884 MC28_4947 2a496a74663da05209c276d435f2d55e 230 SUPERFAMILY SSF53067 108 214 2.07E-15 T 14-10-2018 MC28_4947 2a496a74663da05209c276d435f2d55e 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 4.6E-56 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 MC28_4947 2a496a74663da05209c276d435f2d55e 230 Gene3D G3DSA:3.30.420.40 95 189 2.5E-50 T 14-10-2018 MC28_4947 2a496a74663da05209c276d435f2d55e 230 Gene3D G3DSA:3.30.420.40 3 216 2.5E-50 T 14-10-2018 MC28_4947 2a496a74663da05209c276d435f2d55e 230 SUPERFAMILY SSF53067 1 101 1.55E-28 T 14-10-2018 MC28_4947 2a496a74663da05209c276d435f2d55e 230 Pfam PF00814 Glycoprotease family 32 224 2.0E-36 T 14-10-2018 IPR000905 Gcp-like domain MC28_5356 341c8bcc75388a60762cbb32af6c066e 475 Pfam PF02378 Phosphotransferase system, EIIC 112 412 6.9E-44 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_5356 341c8bcc75388a60762cbb32af6c066e 475 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_5356 341c8bcc75388a60762cbb32af6c066e 475 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 469 2.3E-200 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 MC28_5356 341c8bcc75388a60762cbb32af6c066e 475 SUPERFAMILY SSF55604 8 83 4.58E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_5356 341c8bcc75388a60762cbb32af6c066e 475 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 113 1.1E-17 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 MC28_5356 341c8bcc75388a60762cbb32af6c066e 475 Gene3D G3DSA:3.30.1360.60 2 80 1.2E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_5356 341c8bcc75388a60762cbb32af6c066e 475 Pfam PF00367 phosphotransferase system, EIIB 11 43 8.6E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_0955 6593d6703e0142f9fd0b447eba1c7232 114 Pfam PF12650 Domain of unknown function (DUF3784) 20 106 2.5E-7 T 14-10-2018 IPR017259 Uncharacterised conserved protein UCP037672 MC28_2185 09fb886df4e9989e54e24a6200b0f5d2 453 Gene3D G3DSA:1.20.1740.10 1 450 1.9E-61 T 14-10-2018 MC28_2185 09fb886df4e9989e54e24a6200b0f5d2 453 PIRSF PIRSF006060 1 452 1.7E-69 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_2185 09fb886df4e9989e54e24a6200b0f5d2 453 Pfam PF00324 Amino acid permease 1 439 4.5E-128 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_2185 09fb886df4e9989e54e24a6200b0f5d2 453 ProSitePatterns PS00218 Amino acid permeases signature. 23 54 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 MC28_3705 9a72689c33756ff7a6ba179245d2c5d9 519 PIRSF PIRSF038958 1 517 1.8E-174 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type MC28_3705 9a72689c33756ff7a6ba179245d2c5d9 519 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 6 494 3.9E-196 T 14-10-2018 IPR014249 Sporulation stage V protein B MC28_3705 9a72689c33756ff7a6ba179245d2c5d9 519 Pfam PF01943 Polysaccharide biosynthesis protein 6 308 7.9E-53 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 MC28_3705 9a72689c33756ff7a6ba179245d2c5d9 519 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 359 500 4.9E-17 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain MC28_3939 4bb379689fc53f6f584e6fe3789fca30 181 Pfam PF08281 Sigma-70, region 4 115 167 1.7E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_3939 4bb379689fc53f6f584e6fe3789fca30 181 Pfam PF04542 Sigma-70 region 2 29 92 4.0E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3939 4bb379689fc53f6f584e6fe3789fca30 181 Gene3D G3DSA:1.10.10.10 110 178 5.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3939 4bb379689fc53f6f584e6fe3789fca30 181 SUPERFAMILY SSF88659 108 172 8.22E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_3939 4bb379689fc53f6f584e6fe3789fca30 181 Gene3D G3DSA:1.10.1740.10 7 89 2.4E-15 T 14-10-2018 MC28_3939 4bb379689fc53f6f584e6fe3789fca30 181 SUPERFAMILY SSF88946 7 109 2.88E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_3939 4bb379689fc53f6f584e6fe3789fca30 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 171 5.2E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_4734 348d26bab666e1de7802113d68a745d7 222 SUPERFAMILY SSF52540 14 215 1.2E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4734 348d26bab666e1de7802113d68a745d7 222 PIRSF PIRSF000705 2 220 1.6E-64 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 MC28_4734 348d26bab666e1de7802113d68a745d7 222 Gene3D G3DSA:3.40.50.300 12 217 4.6E-58 T 14-10-2018 MC28_4734 348d26bab666e1de7802113d68a745d7 222 Pfam PF01712 Deoxynucleoside kinase 15 214 1.8E-63 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain MC28_4761 c209202603cb102a067220b1283eb0f9 271 SUPERFAMILY SSF53271 80 257 2.13E-41 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_4761 c209202603cb102a067220b1283eb0f9 271 Gene3D G3DSA:3.40.50.2020 64 261 2.5E-58 T 14-10-2018 MC28_4761 c209202603cb102a067220b1283eb0f9 271 Gene3D G3DSA:1.10.10.10 1 62 3.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4761 c209202603cb102a067220b1283eb0f9 271 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 1 62 4.0E-29 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 MC28_4761 c209202603cb102a067220b1283eb0f9 271 Pfam PF00156 Phosphoribosyl transferase domain 96 253 2.8E-23 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 MC28_4761 c209202603cb102a067220b1283eb0f9 271 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 2 258 4.2E-117 T 14-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 MC28_4761 c209202603cb102a067220b1283eb0f9 271 Pfam PF09182 Bacterial purine repressor, N-terminal 1 62 4.2E-28 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 MC28_4761 c209202603cb102a067220b1283eb0f9 271 SUPERFAMILY SSF46785 1 63 2.15E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2495 c205d6bdfadaddef85e84d615abbebf2 304 SUPERFAMILY SSF48452 4 158 1.42E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_2495 c205d6bdfadaddef85e84d615abbebf2 304 Gene3D G3DSA:1.25.40.10 105 269 1.3E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_2495 c205d6bdfadaddef85e84d615abbebf2 304 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 14 106 2.0E-6 T 14-10-2018 IPR015374 Chs5p-Arf1p binding MC28_2495 c205d6bdfadaddef85e84d615abbebf2 304 SUPERFAMILY SSF48452 131 217 2.28E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_2495 c205d6bdfadaddef85e84d615abbebf2 304 SMART SM00028 165 198 420.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2495 c205d6bdfadaddef85e84d615abbebf2 304 SMART SM00028 33 67 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2495 c205d6bdfadaddef85e84d615abbebf2 304 SMART SM00028 68 101 5.9E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2495 c205d6bdfadaddef85e84d615abbebf2 304 Gene3D G3DSA:1.25.40.10 2 104 1.9E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1483 06cea4e6ad9aa88f103b396739501ffd 375 Pfam PF00589 Phage integrase family 176 355 1.7E-27 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_1483 06cea4e6ad9aa88f103b396739501ffd 375 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 69 123 5.2E-17 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_1483 06cea4e6ad9aa88f103b396739501ffd 375 Pfam PF14657 Arm DNA-binding domain 14 59 1.3E-11 T 14-10-2018 IPR028259 AP2-like integrase, N-terminal domain MC28_1483 06cea4e6ad9aa88f103b396739501ffd 375 Gene3D G3DSA:1.10.150.130 61 170 1.6E-27 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_1483 06cea4e6ad9aa88f103b396739501ffd 375 Gene3D G3DSA:1.10.443.10 171 369 2.2E-57 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_1483 06cea4e6ad9aa88f103b396739501ffd 375 SUPERFAMILY SSF56349 67 364 3.83E-71 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_1770 54f60a87ce4bd21557728ff477a2c088 485 SUPERFAMILY SSF56601 33 357 3.94E-73 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1770 54f60a87ce4bd21557728ff477a2c088 485 Pfam PF00144 Beta-lactamase 37 354 2.7E-60 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_1770 54f60a87ce4bd21557728ff477a2c088 485 Gene3D G3DSA:3.40.710.10 27 362 2.7E-84 T 14-10-2018 MC28_3513 0ce73b15afc1c63b784c4735426867c3 290 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3513 0ce73b15afc1c63b784c4735426867c3 290 Pfam PF00005 ABC transporter 16 155 3.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3513 0ce73b15afc1c63b784c4735426867c3 290 SMART SM00382 25 204 5.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3513 0ce73b15afc1c63b784c4735426867c3 290 Gene3D G3DSA:3.40.50.300 1 222 5.9E-50 T 14-10-2018 MC28_3513 0ce73b15afc1c63b784c4735426867c3 290 SUPERFAMILY SSF52540 2 218 2.05E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3227 c92d344d815567a364a5a78e7d73aecc 207 Gene3D G3DSA:1.20.120.80 21 206 9.3E-53 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3227 c92d344d815567a364a5a78e7d73aecc 207 SUPERFAMILY SSF81452 21 204 3.01E-56 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3227 c92d344d815567a364a5a78e7d73aecc 207 Pfam PF00510 Cytochrome c oxidase subunit III 28 204 8.0E-20 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 SUPERFAMILY SSF47384 218 299 1.9E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 Gene3D G3DSA:1.10.287.130 225 297 6.9E-12 T 14-10-2018 MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 441 2.9E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 SMART SM00387 343 454 2.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 Gene3D G3DSA:3.30.565.10 303 454 3.0E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.1E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.1E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 2.1E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 SMART SM00388 232 298 3.2E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 SUPERFAMILY SSF55874 289 452 9.82E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4298 d0c74cb0e5b31e3328d87cf924fefa40 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 297 3.8E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_1369 2610ef1ce034d53e87bcfdb384cf9ac4 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 2.1E-10 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1369 2610ef1ce034d53e87bcfdb384cf9ac4 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 2.1E-10 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1369 2610ef1ce034d53e87bcfdb384cf9ac4 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 2.1E-10 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1369 2610ef1ce034d53e87bcfdb384cf9ac4 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 261 274 2.1E-10 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1369 2610ef1ce034d53e87bcfdb384cf9ac4 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 102 127 2.1E-10 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1369 2610ef1ce034d53e87bcfdb384cf9ac4 279 Pfam PF00797 N-acetyltransferase 22 268 7.8E-44 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 MC28_1369 2610ef1ce034d53e87bcfdb384cf9ac4 279 SUPERFAMILY SSF54001 1 276 7.36E-65 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_1369 2610ef1ce034d53e87bcfdb384cf9ac4 279 Gene3D G3DSA:3.30.2140.20 1 279 4.9E-106 T 14-10-2018 MC28_4708 4ea522c5b35fa8186794ba7a88df65ab 65 PIRSF PIRSF037263 1 65 2.2E-35 T 14-10-2018 IPR009296 Protein of unknown function DUF951 MC28_4708 4ea522c5b35fa8186794ba7a88df65ab 65 Pfam PF06107 Bacterial protein of unknown function (DUF951) 6 60 4.6E-30 T 14-10-2018 IPR009296 Protein of unknown function DUF951 MC28_3427 bd0e99cf89b09fd158ad3101a61fd29d 317 Gene3D G3DSA:3.60.15.10 1 259 1.2E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3427 bd0e99cf89b09fd158ad3101a61fd29d 317 SMART SM00849 17 231 6.6E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3427 bd0e99cf89b09fd158ad3101a61fd29d 317 Pfam PF00753 Metallo-beta-lactamase superfamily 17 231 1.1E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3427 bd0e99cf89b09fd158ad3101a61fd29d 317 SUPERFAMILY SSF56281 4 297 2.88E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_4187 05f604f0ed7217ebd72f7d2031cbc707 295 SUPERFAMILY SSF53448 4 275 7.72E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4187 05f604f0ed7217ebd72f7d2031cbc707 295 Pfam PF00483 Nucleotidyl transferase 6 258 4.3E-35 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 MC28_4187 05f604f0ed7217ebd72f7d2031cbc707 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 2.2E-122 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 MC28_4187 05f604f0ed7217ebd72f7d2031cbc707 295 Gene3D G3DSA:3.90.550.10 1 290 2.7E-95 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_0568 6f440ab05a82fbe4e01416e8840d6a81 177 Gene3D G3DSA:1.20.120.450 3 173 9.5E-35 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_0568 6f440ab05a82fbe4e01416e8840d6a81 177 Pfam PF12867 DinB superfamily 17 166 3.3E-15 T 14-10-2018 IPR024775 DinB-like domain MC28_0568 6f440ab05a82fbe4e01416e8840d6a81 177 SUPERFAMILY SSF109854 3 171 8.09E-27 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_4343 7be5b0a2cd2d5da9774980245c9e4ed8 171 Gene3D G3DSA:3.40.630.30 4 170 1.8E-50 T 14-10-2018 MC28_4343 7be5b0a2cd2d5da9774980245c9e4ed8 171 SUPERFAMILY SSF55729 3 162 1.74E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4343 7be5b0a2cd2d5da9774980245c9e4ed8 171 Pfam PF13302 Acetyltransferase (GNAT) domain 5 138 8.0E-23 T 14-10-2018 IPR000182 GNAT domain MC28_2884 2e4831f7300a9d0ddf1819170f2319e7 179 Pfam PF04238 Protein of unknown function (DUF420) 46 174 2.1E-43 T 14-10-2018 IPR007352 Protein of unknown function DUF420 MC28_3288 a8fec82a7e78d90f11741124b0ad5209 217 SUPERFAMILY SSF55073 74 216 3.3E-12 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_3288 a8fec82a7e78d90f11741124b0ad5209 217 Pfam PF00990 Diguanylate cyclase, GGDEF domain 82 216 4.3E-11 T 14-10-2018 IPR000160 GGDEF domain MC28_3288 a8fec82a7e78d90f11741124b0ad5209 217 Gene3D G3DSA:3.30.70.270 68 211 9.8E-14 T 14-10-2018 MC28_4321 969de7945337fd64baa3f6f0a4e79ca5 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 1.5E-56 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 MC28_4321 969de7945337fd64baa3f6f0a4e79ca5 393 Pfam PF07670 Nucleoside recognition 91 189 1.0E-5 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 MC28_4321 969de7945337fd64baa3f6f0a4e79ca5 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.0E-19 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 MC28_1621 ad7354785a4e108cc10885c6c2f04e1c 273 SUPERFAMILY SSF53335 10 226 7.75E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1621 ad7354785a4e108cc10885c6c2f04e1c 273 PIRSF PIRSF028177 1 273 4.9E-66 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 MC28_1621 ad7354785a4e108cc10885c6c2f04e1c 273 Gene3D G3DSA:3.40.50.150 6 227 2.0E-28 T 14-10-2018 MC28_1621 ad7354785a4e108cc10885c6c2f04e1c 273 Pfam PF04072 Leucine carboxyl methyltransferase 20 174 7.7E-12 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 MC28_3925 48c191a5572cef42b5aa89035825f6e2 404 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 371 2.4E-70 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 MC28_3925 48c191a5572cef42b5aa89035825f6e2 404 SMART SM00981 75 166 1.8E-19 T 14-10-2018 IPR004114 THUMP domain GO:0003723 MC28_3925 48c191a5572cef42b5aa89035825f6e2 404 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 404 164.572 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 MC28_3925 48c191a5572cef42b5aa89035825f6e2 404 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 7 373 2.2E-129 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 MC28_3925 48c191a5572cef42b5aa89035825f6e2 404 SUPERFAMILY SSF52402 176 382 1.3E-54 T 14-10-2018 MC28_3925 48c191a5572cef42b5aa89035825f6e2 404 Pfam PF02926 THUMP domain 35 162 7.0E-19 T 14-10-2018 IPR004114 THUMP domain GO:0003723 MC28_3925 48c191a5572cef42b5aa89035825f6e2 404 Gene3D G3DSA:3.30.2130.30 1 175 5.2E-67 T 14-10-2018 MC28_3925 48c191a5572cef42b5aa89035825f6e2 404 SUPERFAMILY SSF143437 4 174 2.44E-53 T 14-10-2018 MC28_3925 48c191a5572cef42b5aa89035825f6e2 404 Gene3D G3DSA:3.40.50.620 176 404 2.8E-85 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_2507 647e4f2707ef49247716fb15b27e60c5 253 Pfam PF00805 Pentapeptide repeats (8 copies) 182 221 2.3E-14 T 14-10-2018 IPR001646 Pentapeptide repeat MC28_2507 647e4f2707ef49247716fb15b27e60c5 253 SUPERFAMILY SSF141571 32 248 4.32E-26 T 14-10-2018 MC28_2507 647e4f2707ef49247716fb15b27e60c5 253 Gene3D G3DSA:2.160.20.100 148 243 2.0E-20 T 14-10-2018 MC28_1709 201032e8bea5580258f9ffecb625ef27 586 SUPERFAMILY SSF56601 169 575 1.22E-58 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1709 201032e8bea5580258f9ffecb625ef27 586 Gene3D G3DSA:3.90.1310.30 30 211 3.6E-31 T 14-10-2018 MC28_1709 201032e8bea5580258f9ffecb625ef27 586 SUPERFAMILY SSF56519 32 214 1.31E-31 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_1709 201032e8bea5580258f9ffecb625ef27 586 Pfam PF00905 Penicillin binding protein transpeptidase domain 241 567 3.7E-45 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_1709 201032e8bea5580258f9ffecb625ef27 586 Pfam PF03717 Penicillin-binding Protein dimerisation domain 37 203 3.3E-31 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_1709 201032e8bea5580258f9ffecb625ef27 586 Gene3D G3DSA:3.40.710.10 212 584 4.0E-69 T 14-10-2018 MC28_3038 a86741fc52aff033547b9274dc1d514e 93 Pfam PF04296 Protein of unknown function (DUF448) 12 84 5.1E-26 T 14-10-2018 IPR007393 Domain of unknown function DUF448 MC28_3038 a86741fc52aff033547b9274dc1d514e 93 Gene3D G3DSA:3.30.1230.10 2 93 5.6E-35 T 14-10-2018 IPR035931 YlxR-like superfamily MC28_3038 a86741fc52aff033547b9274dc1d514e 93 SUPERFAMILY SSF64376 7 90 3.66E-27 T 14-10-2018 IPR035931 YlxR-like superfamily MC28_4767 0457ebb742796c50f6b8e06c34b5d4da 74 Pfam PF10955 Protein of unknown function (DUF2757) 1 74 5.7E-29 T 14-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 MC28_4767 0457ebb742796c50f6b8e06c34b5d4da 74 ProDom PD057826 YABK 1 74 1.0E-36 T 14-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 MC28_4636 5ce9e55525e416330ba7cb9fab982aad 208 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 193 4.4E-9 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_4480 d30042023779998dbd3befca7f8d6d7d 74 Pfam PF07872 Protein of unknown function (DUF1659) 8 51 3.0E-13 T 14-10-2018 IPR012454 Protein of unknown function DUF1659 MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 Gene3D G3DSA:3.40.190.10 165 266 3.2E-39 T 14-10-2018 MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 Pfam PF03466 LysR substrate binding domain 86 292 6.3E-45 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 SUPERFAMILY SSF53850 87 295 1.43E-41 T 14-10-2018 MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 Gene3D G3DSA:1.10.10.10 1 84 5.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 Gene3D G3DSA:3.40.190.10 90 288 3.2E-39 T 14-10-2018 MC28_2630 e846ce82f167e98a4ef47f9d63b6f66b 297 SUPERFAMILY SSF46785 1 84 3.52E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3543 dd972f77e25caa243fc2a41d59323fba 125 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 10 92 1.4E-8 T 14-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 MC28_3543 dd972f77e25caa243fc2a41d59323fba 125 Gene3D G3DSA:3.40.50.450 2 124 2.2E-9 T 14-10-2018 MC28_3543 dd972f77e25caa243fc2a41d59323fba 125 SUPERFAMILY SSF52309 1 93 2.44E-8 T 14-10-2018 MC28_5287 6fe8f209a695f7d73711138bc2fe185a 226 Gene3D G3DSA:3.40.630.30 95 215 5.4E-16 T 14-10-2018 MC28_5287 6fe8f209a695f7d73711138bc2fe185a 226 Pfam PF12746 GNAT acetyltransferase 123 214 5.1E-7 T 14-10-2018 IPR027365 GNAT acetyltransferase YdfB-like MC28_5287 6fe8f209a695f7d73711138bc2fe185a 226 SUPERFAMILY SSF55729 120 214 9.35E-7 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1230 bc47d0d5e4c485c4b12bc8c7633fcb73 350 SUPERFAMILY SSF52540 104 323 4.73E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1230 bc47d0d5e4c485c4b12bc8c7633fcb73 350 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 25 325 33.071 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 MC28_1230 bc47d0d5e4c485c4b12bc8c7633fcb73 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 67 317 1.4E-51 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 MC28_1230 bc47d0d5e4c485c4b12bc8c7633fcb73 350 Gene3D G3DSA:3.40.50.300 90 261 1.9E-48 T 14-10-2018 MC28_1230 bc47d0d5e4c485c4b12bc8c7633fcb73 350 Pfam PF03193 RsgA GTPase 87 262 1.2E-50 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 MC28_1230 bc47d0d5e4c485c4b12bc8c7633fcb73 350 SUPERFAMILY SSF50249 27 91 1.14E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_1230 bc47d0d5e4c485c4b12bc8c7633fcb73 350 Gene3D G3DSA:1.10.40.50 264 334 5.0E-22 T 14-10-2018 MC28_5233 2f4252d9f131516a6605f3f776bae232 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 242 6.1E-60 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_5233 2f4252d9f131516a6605f3f776bae232 321 SUPERFAMILY SSF51735 1 318 4.57E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_5233 2f4252d9f131516a6605f3f776bae232 321 Gene3D G3DSA:3.40.50.720 2 320 5.0E-100 T 14-10-2018 MC28_1680 ea8b8e2761a867fd0d1b34beca7127d2 450 SMART SM00487 24 222 1.1E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_1680 ea8b8e2761a867fd0d1b34beca7127d2 450 SUPERFAMILY SSF52540 73 360 1.84E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1680 ea8b8e2761a867fd0d1b34beca7127d2 450 Gene3D G3DSA:3.40.50.300 5 209 6.6E-75 T 14-10-2018 MC28_1680 ea8b8e2761a867fd0d1b34beca7127d2 450 SMART SM00490 258 339 1.4E-34 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_1680 ea8b8e2761a867fd0d1b34beca7127d2 450 Pfam PF00271 Helicase conserved C-terminal domain 241 339 8.2E-30 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_1680 ea8b8e2761a867fd0d1b34beca7127d2 450 Gene3D G3DSA:3.40.50.300 210 446 2.2E-52 T 14-10-2018 MC28_1680 ea8b8e2761a867fd0d1b34beca7127d2 450 Pfam PF00270 DEAD/DEAH box helicase 29 196 7.3E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MC28_0759 bfe061ab436435b047e4bb44627ea0e5 190 Pfam PF07187 Protein of unknown function (DUF1405) 18 175 1.3E-57 T 14-10-2018 IPR009845 Protein of unknown function DUF1405 MC28_2797 6b63dadf98b17e486912fd9c3cec2ba3 146 Pfam PF09021 HutP 9 144 6.3E-38 T 14-10-2018 IPR015111 Hut operon regulatory protein HutP MC28_2797 6b63dadf98b17e486912fd9c3cec2ba3 146 Hamap MF_00779 Hut operon positive regulatory protein [hutP]. 1 146 45.524 T 14-10-2018 IPR023552 Hut operon regulatory protein HutP, bacillales MC28_2797 6b63dadf98b17e486912fd9c3cec2ba3 146 Gene3D G3DSA:3.40.1510.10 2 146 1.5E-62 T 14-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily MC28_2797 6b63dadf98b17e486912fd9c3cec2ba3 146 SUPERFAMILY SSF111064 7 146 2.22E-62 T 14-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily MC28_0847 5beda5849682a9f83a1681d33d222132 82 ProDom PD062992 CYTOSOLIC YPZA BH2151 1 82 8.0E-41 T 14-10-2018 IPR020314 Uncharacterised protein family YpzA MC28_0847 5beda5849682a9f83a1681d33d222132 82 Pfam PF10819 Protein of unknown function (DUF2564) 5 82 5.6E-35 T 14-10-2018 IPR020314 Uncharacterised protein family YpzA MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 371 399 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 Gene3D G3DSA:2.160.10.10 221 407 5.0E-54 T 14-10-2018 MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 420 1.3E-165 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 SUPERFAMILY SSF51161 222 414 1.61E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 SUPERFAMILY SSF53448 1 275 5.4E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 286 320 1.9E-6 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 363 396 1.9E-7 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 234 268 7.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 Pfam PF00483 Nucleotidyl transferase 1 178 3.5E-18 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 Gene3D G3DSA:3.90.550.10 1 220 1.5E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4764 64dd2afb55c6dfa22aefd521f3c6f06d 427 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 420 35.706 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 MC28_2275 f5ce2b172f53251b8b1b30a65da10546 156 Gene3D G3DSA:1.20.120.450 4 147 5.7E-20 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2275 f5ce2b172f53251b8b1b30a65da10546 156 SUPERFAMILY SSF109854 9 156 2.2E-28 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2275 f5ce2b172f53251b8b1b30a65da10546 156 Pfam PF12867 DinB superfamily 11 139 5.6E-8 T 14-10-2018 IPR024775 DinB-like domain MC28_2345 8a3a9f72ce3b50fc67951b72df25cfce 409 SUPERFAMILY SSF55031 186 291 1.7E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_2345 8a3a9f72ce3b50fc67951b72df25cfce 409 Pfam PF01546 Peptidase family M20/M25/M40 97 368 1.7E-9 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_2345 8a3a9f72ce3b50fc67951b72df25cfce 409 Gene3D G3DSA:3.40.630.10 34 378 1.9E-136 T 14-10-2018 MC28_2345 8a3a9f72ce3b50fc67951b72df25cfce 409 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 33 356 8.0E-71 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_2345 8a3a9f72ce3b50fc67951b72df25cfce 409 SUPERFAMILY SSF53187 19 392 2.18E-60 T 14-10-2018 MC28_2345 8a3a9f72ce3b50fc67951b72df25cfce 409 PIRSF PIRSF037226 11 409 1.8E-176 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted MC28_2345 8a3a9f72ce3b50fc67951b72df25cfce 409 Gene3D G3DSA:3.30.70.360 183 300 1.9E-136 T 14-10-2018 MC28_2345 8a3a9f72ce3b50fc67951b72df25cfce 409 Pfam PF07687 Peptidase dimerisation domain 190 277 1.2E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_0023 4c39711fe6a451de6aa899c0394400ea 153 SUPERFAMILY SSF46785 30 152 2.53E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0023 4c39711fe6a451de6aa899c0394400ea 153 SMART SM00347 34 137 7.8E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0023 4c39711fe6a451de6aa899c0394400ea 153 Gene3D G3DSA:1.10.10.10 2 152 2.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0023 4c39711fe6a451de6aa899c0394400ea 153 Pfam PF01047 MarR family 42 98 3.3E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2158 9bfb3feb9739f5c32af4a42d37b429c7 497 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 4 489 8.1E-240 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 MC28_2158 9bfb3feb9739f5c32af4a42d37b429c7 497 SUPERFAMILY SSF51905 1 271 4.66E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2158 9bfb3feb9739f5c32af4a42d37b429c7 497 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 1 489 54.209 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 MC28_2158 9bfb3feb9739f5c32af4a42d37b429c7 497 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 5 487 1.1E-216 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 MC28_2726 535ecbc8da8415865c9e2548b744ad1e 378 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 199 375 6.1E-27 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_2726 535ecbc8da8415865c9e2548b744ad1e 378 Gene3D G3DSA:3.30.300.210 233 378 3.7E-27 T 14-10-2018 IPR038501 Spore germination GerAC superfamily MC28_2726 535ecbc8da8415865c9e2548b744ad1e 378 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 6 378 6.1E-59 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_0442 6eb5ebf4c57038968b38ce8fadd6354e 256 PIRSF PIRSF000094 1 256 3.2E-103 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 MC28_0442 6eb5ebf4c57038968b38ce8fadd6354e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0442 6eb5ebf4c57038968b38ce8fadd6354e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0442 6eb5ebf4c57038968b38ce8fadd6354e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0442 6eb5ebf4c57038968b38ce8fadd6354e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0442 6eb5ebf4c57038968b38ce8fadd6354e 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 1.5E-87 T 14-10-2018 MC28_0442 6eb5ebf4c57038968b38ce8fadd6354e 256 Gene3D G3DSA:3.40.50.720 1 256 2.1E-61 T 14-10-2018 MC28_0442 6eb5ebf4c57038968b38ce8fadd6354e 256 SUPERFAMILY SSF51735 5 254 9.74E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1386 fcd71f642e885f95812441b548c7ea64 293 Gene3D G3DSA:1.10.150.350 148 273 4.4E-117 T 14-10-2018 MC28_1386 fcd71f642e885f95812441b548c7ea64 293 Gene3D G3DSA:3.40.50.150 18 209 4.4E-117 T 14-10-2018 MC28_1386 fcd71f642e885f95812441b548c7ea64 293 SUPERFAMILY SSF53335 5 153 3.32E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1386 fcd71f642e885f95812441b548c7ea64 293 Pfam PF13847 Methyltransferase domain 38 160 1.6E-22 T 14-10-2018 IPR025714 Methyltransferase domain MC28_1235 867a1020c8509e5163d210457da5c83b 147 PIRSF PIRSF005900 1 147 9.3E-52 T 14-10-2018 IPR002177 DNA-binding protein Dps MC28_1235 867a1020c8509e5163d210457da5c83b 147 SUPERFAMILY SSF47240 7 146 7.65E-49 T 14-10-2018 IPR009078 Ferritin-like superfamily MC28_1235 867a1020c8509e5163d210457da5c83b 147 Pfam PF00210 Ferritin-like domain 9 146 5.1E-36 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 MC28_1235 867a1020c8509e5163d210457da5c83b 147 Gene3D G3DSA:1.20.1260.10 2 147 1.7E-57 T 14-10-2018 IPR012347 Ferritin-like MC28_1235 867a1020c8509e5163d210457da5c83b 147 ProSitePatterns PS00818 Dps protein family signature 1. 29 45 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 MC28_1235 867a1020c8509e5163d210457da5c83b 147 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 124 142 1.5E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps MC28_1235 867a1020c8509e5163d210457da5c83b 147 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 29 45 1.5E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps MC28_1235 867a1020c8509e5163d210457da5c83b 147 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 53 69 1.5E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps MC28_1095 f95800d4cc1d9255b657010da03597af 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 310 3.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1095 f95800d4cc1d9255b657010da03597af 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 3.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1095 f95800d4cc1d9255b657010da03597af 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 272 3.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1095 f95800d4cc1d9255b657010da03597af 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 286 3.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1095 f95800d4cc1d9255b657010da03597af 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 223 330 3.5E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1095 f95800d4cc1d9255b657010da03597af 340 SUPERFAMILY SSF47384 119 174 1.26E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_1095 f95800d4cc1d9255b657010da03597af 340 SMART SM00387 220 332 3.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1095 f95800d4cc1d9255b657010da03597af 340 SUPERFAMILY SSF55874 184 330 6.81E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1095 f95800d4cc1d9255b657010da03597af 340 Gene3D G3DSA:1.10.287.130 127 173 8.4E-32 T 14-10-2018 MC28_1095 f95800d4cc1d9255b657010da03597af 340 Gene3D G3DSA:3.30.565.10 174 329 8.4E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4987 5deaf97a225b57932d77b1a037d6f7a1 258 SUPERFAMILY SSF52540 1 179 1.38E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4987 5deaf97a225b57932d77b1a037d6f7a1 258 Pfam PF00005 ABC transporter 2 113 3.3E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4987 5deaf97a225b57932d77b1a037d6f7a1 258 ProSitePatterns PS00211 ABC transporters family signature. 85 99 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4987 5deaf97a225b57932d77b1a037d6f7a1 258 Gene3D G3DSA:3.40.50.300 1 190 4.8E-42 T 14-10-2018 MC28_G274 bd5818f498fedd3565ded4cee18a7f89 92 Gene3D G3DSA:1.10.10.10 1 89 2.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G274 bd5818f498fedd3565ded4cee18a7f89 92 SMART SM00418 11 90 1.5E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_G274 bd5818f498fedd3565ded4cee18a7f89 92 Pfam PF01022 Bacterial regulatory protein, arsR family 18 58 1.4E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_G274 bd5818f498fedd3565ded4cee18a7f89 92 SUPERFAMILY SSF46785 3 88 1.04E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3640 c46af2aad2abed4409a785e35416d659 287 Pfam PF00561 alpha/beta hydrolase fold 191 266 5.5E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3640 c46af2aad2abed4409a785e35416d659 287 Pfam PF00561 alpha/beta hydrolase fold 58 157 1.5E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3640 c46af2aad2abed4409a785e35416d659 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 2.5E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3640 c46af2aad2abed4409a785e35416d659 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 98 2.5E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3640 c46af2aad2abed4409a785e35416d659 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 2.5E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_3640 c46af2aad2abed4409a785e35416d659 287 SUPERFAMILY SSF53474 36 279 2.39E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3640 c46af2aad2abed4409a785e35416d659 287 Gene3D G3DSA:3.40.50.1820 19 280 1.6E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1395 3defb310c57c70e0663fefcc66a03742 304 SUPERFAMILY SSF53474 12 303 7.97E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1395 3defb310c57c70e0663fefcc66a03742 304 Pfam PF00561 alpha/beta hydrolase fold 33 291 1.3E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1395 3defb310c57c70e0663fefcc66a03742 304 Gene3D G3DSA:3.40.50.1820 9 304 5.8E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1395 3defb310c57c70e0663fefcc66a03742 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 62 73 9.6E-10 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MC28_1395 3defb310c57c70e0663fefcc66a03742 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 34 42 9.6E-10 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MC28_1395 3defb310c57c70e0663fefcc66a03742 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 105 119 9.6E-10 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 Pfam PF10397 Adenylosuccinate lyase C-terminus 352 429 3.1E-26 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 SUPERFAMILY SSF48557 3 429 8.01E-141 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 Gene3D G3DSA:1.10.275.10 1 94 3.9E-42 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 Gene3D G3DSA:1.10.40.30 351 435 2.9E-38 T 14-10-2018 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 ProSitePatterns PS00163 Fumarate lyases signature. 263 272 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 430 1.8E-182 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 Gene3D G3DSA:1.20.200.10 95 350 7.8E-107 T 14-10-2018 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 SMART SM00998 351 431 5.6E-41 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 Pfam PF00206 Lyase 6 288 9.3E-76 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 2.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 PRINTS PR00149 Fumarate lyase superfamily signature 263 279 2.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 PRINTS PR00149 Fumarate lyase superfamily signature 90 108 2.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 PRINTS PR00149 Fumarate lyase superfamily signature 218 245 2.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 PRINTS PR00145 Argininosuccinate lyase family signature 263 279 9.9E-10 T 14-10-2018 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 PRINTS PR00145 Argininosuccinate lyase family signature 89 111 9.9E-10 T 14-10-2018 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 PRINTS PR00145 Argininosuccinate lyase family signature 218 242 9.9E-10 T 14-10-2018 MC28_5004 0c807db7d8595cb4b6d7795c4e56597d 435 PRINTS PR00145 Argininosuccinate lyase family signature 130 150 9.9E-10 T 14-10-2018 MC28_0793 8ecc9d85473873cf69dd75b10a8dd8fb 114 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 11 44 4.2E-16 T 14-10-2018 IPR019933 DivIVA domain MC28_0793 8ecc9d85473873cf69dd75b10a8dd8fb 114 Pfam PF05103 DivIVA protein 11 69 6.5E-18 T 14-10-2018 IPR007793 DivIVA family MC28_0793 8ecc9d85473873cf69dd75b10a8dd8fb 114 PIRSF PIRSF029938 4 114 1.4E-47 T 14-10-2018 IPR011229 Cell cycle protein GpsB MC28_0793 8ecc9d85473873cf69dd75b10a8dd8fb 114 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 6 110 23.646 T 14-10-2018 IPR011229 Cell cycle protein GpsB MC28_3922 95a1b0c0ee210aca040d159ecf904927 143 SUPERFAMILY SSF54593 2 137 4.35E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3922 95a1b0c0ee210aca040d159ecf904927 143 Gene3D G3DSA:3.10.180.10 9 143 1.1E-43 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3922 95a1b0c0ee210aca040d159ecf904927 143 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 136 1.4E-8 T 14-10-2018 IPR028973 PhnB-like MC28_4503 56df942bf1a95f4ea5ebe1b0c0817b0f 272 Pfam PF00535 Glycosyl transferase family 2 13 169 3.6E-15 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_4503 56df942bf1a95f4ea5ebe1b0c0817b0f 272 Gene3D G3DSA:3.90.550.10 2 249 2.0E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4503 56df942bf1a95f4ea5ebe1b0c0817b0f 272 SUPERFAMILY SSF53448 8 237 1.5E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4781 dcd1cc00f5df50950f10b31b61da4c1a 291 Gene3D G3DSA:3.55.30.10 2 233 6.3E-90 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 MC28_4781 dcd1cc00f5df50950f10b31b61da4c1a 291 Gene3D G3DSA:3.90.1280.10 234 290 9.6E-23 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 MC28_4781 dcd1cc00f5df50950f10b31b61da4c1a 291 PIRSF PIRSF005261 1 290 2.2E-76 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 MC28_4781 dcd1cc00f5df50950f10b31b61da4c1a 291 Pfam PF01430 Hsp33 protein 3 280 1.2E-90 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 MC28_4781 dcd1cc00f5df50950f10b31b61da4c1a 291 SUPERFAMILY SSF64397 2 241 8.37E-79 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 MC28_4781 dcd1cc00f5df50950f10b31b61da4c1a 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 291 40.35 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 MC28_4781 dcd1cc00f5df50950f10b31b61da4c1a 291 SUPERFAMILY SSF118352 232 288 1.7E-19 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 Gene3D G3DSA:1.10.287.950 281 578 5.3E-50 T 14-10-2018 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 362 532 3.6E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 SUPERFAMILY SSF58104 252 578 6.41E-50 T 14-10-2018 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 SMART SM00283 284 578 2.5E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 SMART SM00304 521 575 3.1 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 SMART SM00304 225 276 0.013 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 Gene3D G3DSA:1.20.1480.50 191 280 4.8E-6 T 14-10-2018 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 430 1.4E-13 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 15 40 1.4E-13 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_G301 7e67eb133038a0c62597af0a523feeea 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 432 461 1.4E-13 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_0370 6d758c2bdd25efe9ec19e5a4a5ccda6b 121 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 1 121 2.0E-61 T 14-10-2018 IPR010899 Protein of unknown function UPF0344 MC28_0370 6d758c2bdd25efe9ec19e5a4a5ccda6b 121 Pfam PF07457 Protein of unknown function (DUF1516) 2 111 2.5E-32 T 14-10-2018 IPR010899 Protein of unknown function UPF0344 MC28_0370 6d758c2bdd25efe9ec19e5a4a5ccda6b 121 Hamap MF_01536 UPF0344 protein . 1 121 16.783 T 14-10-2018 IPR010899 Protein of unknown function UPF0344 MC28_G408 fb181f715ebfb597109c4099192dde91 155 Pfam PF01381 Helix-turn-helix 22 72 4.9E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G408 fb181f715ebfb597109c4099192dde91 155 SUPERFAMILY SSF47413 16 83 1.34E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_G408 fb181f715ebfb597109c4099192dde91 155 SMART SM00530 21 76 1.0E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G408 fb181f715ebfb597109c4099192dde91 155 Gene3D G3DSA:1.10.260.40 14 97 1.9E-20 T 14-10-2018 MC28_0496 fb181f715ebfb597109c4099192dde91 155 Pfam PF01381 Helix-turn-helix 22 72 4.9E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0496 fb181f715ebfb597109c4099192dde91 155 SUPERFAMILY SSF47413 16 83 1.34E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_0496 fb181f715ebfb597109c4099192dde91 155 SMART SM00530 21 76 1.0E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0496 fb181f715ebfb597109c4099192dde91 155 Gene3D G3DSA:1.10.260.40 14 97 1.9E-20 T 14-10-2018 MC28_5226 0356ed0694629adafee430c8bc705573 503 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 442 459 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_5226 0356ed0694629adafee430c8bc705573 503 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 7 500 1.8E-185 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 MC28_5226 0356ed0694629adafee430c8bc705573 503 SUPERFAMILY SSF55604 431 502 5.23E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_5226 0356ed0694629adafee430c8bc705573 503 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 402 489 1.5E-21 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 MC28_5226 0356ed0694629adafee430c8bc705573 503 Pfam PF00367 phosphotransferase system, EIIB 433 464 8.2E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_5226 0356ed0694629adafee430c8bc705573 503 Pfam PF02378 Phosphotransferase system, EIIC 15 345 3.4E-79 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_5226 0356ed0694629adafee430c8bc705573 503 Gene3D G3DSA:3.30.1360.60 429 503 1.2E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_5005 b8bd0739893c346e588a54a7226c5262 239 SUPERFAMILY SSF56104 1 236 8.5E-86 T 14-10-2018 MC28_5005 b8bd0739893c346e588a54a7226c5262 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5005 b8bd0739893c346e588a54a7226c5262 239 Pfam PF01259 SAICAR synthetase 7 232 1.7E-68 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5005 b8bd0739893c346e588a54a7226c5262 239 Gene3D G3DSA:3.30.200.20 7 232 1.5E-97 T 14-10-2018 MC28_5005 b8bd0739893c346e588a54a7226c5262 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_5005 b8bd0739893c346e588a54a7226c5262 239 Gene3D G3DSA:3.30.470.20 85 221 1.5E-97 T 14-10-2018 MC28_5005 b8bd0739893c346e588a54a7226c5262 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 236 9.9E-79 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 MC28_5005 b8bd0739893c346e588a54a7226c5262 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 34.307 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 MC28_3355 c6a473550fbf77464b304afd780469ac 267 SUPERFAMILY SSF56784 6 258 1.48E-55 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3355 c6a473550fbf77464b304afd780469ac 267 Gene3D G3DSA:3.30.1240.10 88 194 7.0E-54 T 14-10-2018 MC28_3355 c6a473550fbf77464b304afd780469ac 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 10 258 2.4E-49 T 14-10-2018 IPR000150 Cof family GO:0016787 MC28_3355 c6a473550fbf77464b304afd780469ac 267 Gene3D G3DSA:3.40.50.1000 11 259 7.0E-54 T 14-10-2018 IPR023214 HAD superfamily MC28_3355 c6a473550fbf77464b304afd780469ac 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 10 237 6.5E-27 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 MC28_3355 c6a473550fbf77464b304afd780469ac 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 12 258 4.1E-49 T 14-10-2018 MC28_2334 4f78644ca71ce2f9c442dafd6e2190eb 618 Pfam PF12697 Alpha/beta hydrolase family 382 607 5.0E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2334 4f78644ca71ce2f9c442dafd6e2190eb 618 SUPERFAMILY SSF51735 1 294 7.84E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2334 4f78644ca71ce2f9c442dafd6e2190eb 618 Gene3D G3DSA:3.40.50.720 1 313 2.2E-39 T 14-10-2018 MC28_2334 4f78644ca71ce2f9c442dafd6e2190eb 618 SUPERFAMILY SSF53474 373 611 8.11E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2334 4f78644ca71ce2f9c442dafd6e2190eb 618 Pfam PF07993 Male sterility protein 7 239 9.0E-39 T 14-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 MC28_2334 4f78644ca71ce2f9c442dafd6e2190eb 618 Gene3D G3DSA:3.40.50.1820 349 615 3.0E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3710 25eb2df57799342f068af8c2bba6aaa7 354 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 5 346 46.454 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 MC28_3710 25eb2df57799342f068af8c2bba6aaa7 354 Gene3D G3DSA:2.40.10.240 68 166 4.5E-137 T 14-10-2018 MC28_3710 25eb2df57799342f068af8c2bba6aaa7 354 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 5 345 4.4E-151 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 MC28_3710 25eb2df57799342f068af8c2bba6aaa7 354 Pfam PF02547 Queuosine biosynthesis protein 9 345 1.7E-143 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 MC28_3710 25eb2df57799342f068af8c2bba6aaa7 354 Gene3D G3DSA:3.40.1780.10 18 345 4.5E-137 T 14-10-2018 MC28_3710 25eb2df57799342f068af8c2bba6aaa7 354 SUPERFAMILY SSF111337 5 345 1.09E-140 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 MC28_E084 bf2cda863aace42024c5948709147612 507 SUPERFAMILY SSF49785 357 479 1.02E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E084 bf2cda863aace42024c5948709147612 507 Gene3D G3DSA:2.60.120.260 55 157 3.2E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E084 bf2cda863aace42024c5948709147612 507 Gene3D G3DSA:2.60.120.260 358 481 1.5E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_3608 d528196b5eed0922dc7204a7d9d10a98 379 Pfam PF04055 Radical SAM superfamily 7 177 1.6E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_3608 d528196b5eed0922dc7204a7d9d10a98 379 SUPERFAMILY SSF102114 5 377 7.32E-120 T 14-10-2018 MC28_3608 d528196b5eed0922dc7204a7d9d10a98 379 Pfam PF06969 HemN C-terminal domain 303 365 5.9E-16 T 14-10-2018 IPR010723 HemN, C-terminal MC28_3608 d528196b5eed0922dc7204a7d9d10a98 379 SMART SM00729 2 223 6.6E-65 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_3608 d528196b5eed0922dc7204a7d9d10a98 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 367 3.8E-129 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 MC28_3608 d528196b5eed0922dc7204a7d9d10a98 379 Gene3D G3DSA:3.80.30.20 3 301 2.5E-104 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe MC28_4709 3f805e7a73734ee13302bcf1b6a87a98 293 Pfam PF00924 Mechanosensitive ion channel 77 274 7.1E-46 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 MC28_4709 3f805e7a73734ee13302bcf1b6a87a98 293 Gene3D G3DSA:3.30.70.100 185 272 1.1E-22 T 14-10-2018 MC28_4709 3f805e7a73734ee13302bcf1b6a87a98 293 SUPERFAMILY SSF82861 30 118 4.32E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 MC28_4709 3f805e7a73734ee13302bcf1b6a87a98 293 SUPERFAMILY SSF82689 186 284 2.09E-17 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 MC28_4709 3f805e7a73734ee13302bcf1b6a87a98 293 SUPERFAMILY SSF50182 120 182 4.25E-15 T 14-10-2018 IPR010920 LSM domain superfamily MC28_4709 3f805e7a73734ee13302bcf1b6a87a98 293 Gene3D G3DSA:2.30.30.60 135 183 1.0E-21 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily MC28_0367 e19e1dbf7a48cf8213d1d05ac41b5c91 302 SUPERFAMILY SSF56529 82 301 6.54E-76 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 MC28_0367 e19e1dbf7a48cf8213d1d05ac41b5c91 302 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 94 301 7.5E-71 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 MC28_0367 e19e1dbf7a48cf8213d1d05ac41b5c91 302 Gene3D G3DSA:3.90.850.10 88 302 1.6E-87 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 MC28_0395 6afbd03f502c1e85decabc34e970c37a 299 SUPERFAMILY SSF53901 2 297 1.0E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_0395 6afbd03f502c1e85decabc34e970c37a 299 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 297 2.6E-129 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_0395 6afbd03f502c1e85decabc34e970c37a 299 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 297 70.418 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_0395 6afbd03f502c1e85decabc34e970c37a 299 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 208 297 1.7E-36 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_0395 6afbd03f502c1e85decabc34e970c37a 299 Gene3D G3DSA:3.40.47.10 1 299 7.3E-130 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_0395 6afbd03f502c1e85decabc34e970c37a 299 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 95 173 2.6E-32 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_2909 b2575ef4494d31e802586df145f02e9c 410 SUPERFAMILY SSF53187 3 406 1.69E-82 T 14-10-2018 MC28_2909 b2575ef4494d31e802586df145f02e9c 410 Gene3D G3DSA:3.30.70.360 211 321 2.8E-186 T 14-10-2018 MC28_2909 b2575ef4494d31e802586df145f02e9c 410 Pfam PF07687 Peptidase dimerisation domain 209 308 2.7E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_2909 b2575ef4494d31e802586df145f02e9c 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 410 4.3E-202 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 MC28_2909 b2575ef4494d31e802586df145f02e9c 410 Hamap MF_00550 Peptidase T [pepT]. 2 406 58.34 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 MC28_2909 b2575ef4494d31e802586df145f02e9c 410 PIRSF PIRSF037215 1 410 4.7E-194 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 MC28_2909 b2575ef4494d31e802586df145f02e9c 410 SUPERFAMILY SSF55031 211 322 1.22E-38 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_2909 b2575ef4494d31e802586df145f02e9c 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 MC28_2909 b2575ef4494d31e802586df145f02e9c 410 Pfam PF01546 Peptidase family M20/M25/M40 141 404 9.3E-12 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_2909 b2575ef4494d31e802586df145f02e9c 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 MC28_2909 b2575ef4494d31e802586df145f02e9c 410 Gene3D G3DSA:3.40.630.10 5 402 2.8E-186 T 14-10-2018 MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 SUPERFAMILY SSF50022 422 505 1.18E-24 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 Pfam PF00355 Rieske [2Fe-2S] domain 423 504 5.3E-14 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 SUPERFAMILY SSF51905 30 385 8.42E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 Gene3D G3DSA:3.30.9.10 126 337 2.9E-45 T 14-10-2018 MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 Pfam PF01266 FAD dependent oxidoreductase 33 376 2.2E-42 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 Gene3D G3DSA:2.102.10.10 406 508 1.2E-25 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 Gene3D G3DSA:3.50.50.60 34 379 2.9E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 PRINTS PR00162 Rieske 2Fe-2S subunit signature 478 490 4.0E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 PRINTS PR00162 Rieske 2Fe-2S subunit signature 457 468 4.0E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 MC28_5080 f28f371359a2fb271a30ebd1d5af0738 508 PRINTS PR00162 Rieske 2Fe-2S subunit signature 490 502 4.0E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 MC28_5141 805572a12d16d0dcc00a92a38dd069d9 142 Pfam PF00892 EamA-like transporter family 3 140 9.2E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_5141 805572a12d16d0dcc00a92a38dd069d9 142 SUPERFAMILY SSF103481 38 141 4.05E-14 T 14-10-2018 MC28_G085 6efbe0841722025d1ccdb1a95082dbd4 372 Pfam PF00144 Beta-lactamase 50 357 3.2E-46 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_G085 6efbe0841722025d1ccdb1a95082dbd4 372 SUPERFAMILY SSF56601 50 368 2.33E-73 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_G085 6efbe0841722025d1ccdb1a95082dbd4 372 Gene3D G3DSA:3.40.710.10 48 372 6.1E-78 T 14-10-2018 MC28_5370 d5168bf6364e7f0dc32f6c78fd787993 214 Gene3D G3DSA:1.10.3720.10 10 214 4.4E-52 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5370 d5168bf6364e7f0dc32f6c78fd787993 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 109 2.3E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 MC28_5370 d5168bf6364e7f0dc32f6c78fd787993 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 212 4.3E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_5370 d5168bf6364e7f0dc32f6c78fd787993 214 SUPERFAMILY SSF161098 15 209 1.57E-44 T 14-10-2018 IPR035906 MetI-like superfamily MC28_2834 3e0b1868f0e199c288eb23611e6d4820 248 Gene3D G3DSA:3.40.50.1390 28 185 7.7E-27 T 14-10-2018 MC28_2834 3e0b1868f0e199c288eb23611e6d4820 248 Pfam PF00239 Resolvase, N terminal domain 33 177 7.5E-26 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_2834 3e0b1868f0e199c288eb23611e6d4820 248 SUPERFAMILY SSF53041 31 179 4.32E-25 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_2834 3e0b1868f0e199c288eb23611e6d4820 248 SMART SM00857 33 179 1.5E-33 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_3084 2af227304e842894634b995eda9c2c3c 293 Gene3D G3DSA:2.40.50.140 1 61 8.2E-26 T 14-10-2018 MC28_3084 2af227304e842894634b995eda9c2c3c 293 Gene3D G3DSA:3.40.50.300 62 225 8.4E-46 T 14-10-2018 MC28_3084 2af227304e842894634b995eda9c2c3c 293 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 290 39.795 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 MC28_3084 2af227304e842894634b995eda9c2c3c 293 SUPERFAMILY SSF50249 1 63 9.14E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3084 2af227304e842894634b995eda9c2c3c 293 Pfam PF16745 RsgA N-terminal domain 3 56 9.0E-25 T 14-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal MC28_3084 2af227304e842894634b995eda9c2c3c 293 Pfam PF03193 RsgA GTPase 59 225 9.1E-62 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 MC28_3084 2af227304e842894634b995eda9c2c3c 293 SUPERFAMILY SSF52540 64 291 3.53E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3084 2af227304e842894634b995eda9c2c3c 293 Gene3D G3DSA:1.10.40.50 226 293 3.1E-24 T 14-10-2018 MC28_3084 2af227304e842894634b995eda9c2c3c 293 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 283 8.3E-88 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 MC28_3540 c93237a8e5c7a23c6098ec31b09abe05 71 Pfam PF13051 Protein of unknown function (DUF3912) 2 69 1.9E-51 T 14-10-2018 IPR025023 Protein of unknown function DUF3912 MC28_4221 5ef3d24e2077aa947f8d47587e2da020 291 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4221 5ef3d24e2077aa947f8d47587e2da020 291 SMART SM00382 61 249 6.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4221 5ef3d24e2077aa947f8d47587e2da020 291 Gene3D G3DSA:3.40.50.300 30 279 2.4E-68 T 14-10-2018 MC28_4221 5ef3d24e2077aa947f8d47587e2da020 291 Pfam PF00005 ABC transporter 52 200 1.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4221 5ef3d24e2077aa947f8d47587e2da020 291 SUPERFAMILY SSF52540 32 255 1.33E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F036 c505000ec8a0f4be95dbfef7d2c3c4e5 383 Pfam PF01381 Helix-turn-helix 15 52 2.9E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F036 c505000ec8a0f4be95dbfef7d2c3c4e5 383 Gene3D G3DSA:1.10.260.40 1 54 4.9E-8 T 14-10-2018 MC28_F036 c505000ec8a0f4be95dbfef7d2c3c4e5 383 SUPERFAMILY SSF47413 4 54 2.2E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_1464 b5ec701781c2f5bebdccfeb444253932 456 Gene3D G3DSA:3.40.640.10 69 344 4.7E-139 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1464 b5ec701781c2f5bebdccfeb444253932 456 Pfam PF00202 Aminotransferase class-III 36 442 4.4E-103 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_1464 b5ec701781c2f5bebdccfeb444253932 456 SUPERFAMILY SSF53383 29 447 3.84E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_1464 b5ec701781c2f5bebdccfeb444253932 456 PIRSF PIRSF000521 36 447 8.6E-42 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_1464 b5ec701781c2f5bebdccfeb444253932 456 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_1464 b5ec701781c2f5bebdccfeb444253932 456 Gene3D G3DSA:3.90.1150.10 35 444 4.7E-139 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 155 232 1.8E-15 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 36 242 2.5E-55 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 Gene3D G3DSA:2.60.40.2600 131 354 2.3E-69 T 14-10-2018 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 Pfam PF00034 Cytochrome c 259 351 8.1E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 SUPERFAMILY SSF81464 19 121 5.89E-21 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 SUPERFAMILY SSF46626 254 351 1.11E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 SUPERFAMILY SSF49503 129 294 4.23E-43 T 14-10-2018 IPR008972 Cupredoxin MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 Gene3D G3DSA:1.10.287.90 32 118 1.9E-25 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 PRINTS PR01166 Cytochrome c oxidase subunit II signature 177 197 1.3E-14 T 14-10-2018 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 PRINTS PR01166 Cytochrome c oxidase subunit II signature 197 214 1.3E-14 T 14-10-2018 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 PRINTS PR01166 Cytochrome c oxidase subunit II signature 215 232 1.3E-14 T 14-10-2018 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 PRINTS PR01166 Cytochrome c oxidase subunit II signature 89 101 1.3E-14 T 14-10-2018 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 PRINTS PR01166 Cytochrome c oxidase subunit II signature 101 121 1.3E-14 T 14-10-2018 MC28_3229 a9b3af796f2da2b5e30e628e75dfa138 354 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 53 112 3.8E-10 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3548 4ee5516feef33128485f7c10e6561bcf 409 PIRSF PIRSF001434 32 404 6.9E-123 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3548 4ee5516feef33128485f7c10e6561bcf 409 Gene3D G3DSA:3.90.1150.10 285 317 4.0E-6 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3548 4ee5516feef33128485f7c10e6561bcf 409 Gene3D G3DSA:3.40.640.10 42 284 1.5E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3548 4ee5516feef33128485f7c10e6561bcf 409 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 227 241 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3548 4ee5516feef33128485f7c10e6561bcf 409 Gene3D G3DSA:3.90.1150.10 318 408 5.6E-26 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3548 4ee5516feef33128485f7c10e6561bcf 409 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 44 401 6.4E-132 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 MC28_3548 4ee5516feef33128485f7c10e6561bcf 409 SUPERFAMILY SSF53383 56 401 2.39E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0278 422bb1b7cb1b67264718d8f51f18a383 185 Gene3D G3DSA:1.10.10.10 2 167 2.0E-42 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0278 422bb1b7cb1b67264718d8f51f18a383 185 SUPERFAMILY SSF46785 19 130 1.18E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0278 422bb1b7cb1b67264718d8f51f18a383 185 SMART SM00347 37 137 1.6E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0278 422bb1b7cb1b67264718d8f51f18a383 185 Pfam PF01047 MarR family 44 101 1.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0278 422bb1b7cb1b67264718d8f51f18a383 185 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site MC28_0278 422bb1b7cb1b67264718d8f51f18a383 185 Hamap MF_01911 HTH-type transcriptional regulator Hpr [hpr]. 2 185 49.66 T 14-10-2018 IPR023488 HTH-type transcriptional regulator Hpr MC28_G142 ca178e1ca55611159c9da8c08d50f923 1001 Gene3D G3DSA:1.10.3810.10 94 288 2.0E-199 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_G142 ca178e1ca55611159c9da8c08d50f923 1001 Gene3D G3DSA:3.40.710.10 326 650 2.0E-199 T 14-10-2018 MC28_G142 ca178e1ca55611159c9da8c08d50f923 1001 SUPERFAMILY SSF56601 245 655 2.71E-101 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_G142 ca178e1ca55611159c9da8c08d50f923 1001 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 636 1.3E-40 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_G142 ca178e1ca55611159c9da8c08d50f923 1001 Pfam PF00912 Transglycosylase 84 260 6.8E-65 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_G142 ca178e1ca55611159c9da8c08d50f923 1001 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 94 639 1.6E-174 T 14-10-2018 MC28_G142 ca178e1ca55611159c9da8c08d50f923 1001 SUPERFAMILY SSF53955 73 283 1.77E-72 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_G142 ca178e1ca55611159c9da8c08d50f923 1001 Gene3D G3DSA:3.90.1310.20 79 536 2.0E-199 T 14-10-2018 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 26.561 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 Pfam PF01016 Ribosomal L27 protein 10 89 5.4E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 5.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 PRINTS PR00063 Ribosomal protein L27 signature 12 36 1.8E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 PRINTS PR00063 Ribosomal protein L27 signature 62 86 1.8E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 PRINTS PR00063 Ribosomal protein L27 signature 37 61 1.8E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 3.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 Gene3D G3DSA:2.40.50.100 28 93 1.2E-25 T 14-10-2018 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 SUPERFAMILY SSF110324 10 91 1.6E-31 T 14-10-2018 MC28_3734 b64a514b5f6a2a0cda12989078f57a28 96 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_2231 87023b84efa7421f5bf2e0c5d33144f7 251 Pfam PF02517 CAAX protease self-immunity 110 211 2.1E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 Gene3D G3DSA:3.40.50.720 3 352 2.3E-124 T 14-10-2018 MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 SUPERFAMILY SSF51735 134 302 5.44E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 138 351 5.5E-74 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 1.6E-132 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 134 6.1E-38 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 PIRSF PIRSF000183 1 370 8.7E-156 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 Gene3D G3DSA:3.40.50.720 127 304 2.3E-124 T 14-10-2018 MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 SUPERFAMILY SSF52283 1 354 1.62E-51 T 14-10-2018 MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 SMART SM01002 146 296 7.8E-68 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MC28_F062 83b09411f27012307bd1d9167e22c9a1 370 SMART SM01003 4 134 2.0E-61 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal MC28_2697 b940fadd9a105d3f8032639763f718b5 277 SUPERFAMILY SSF55729 140 269 3.37E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2697 b940fadd9a105d3f8032639763f718b5 277 Pfam PF00583 Acetyltransferase (GNAT) family 168 264 5.3E-9 T 14-10-2018 IPR000182 GNAT domain MC28_2697 b940fadd9a105d3f8032639763f718b5 277 Gene3D G3DSA:3.40.630.30 157 273 1.9E-15 T 14-10-2018 MC28_G289 31a42db8a8cdf81eb6a325f708b389ca 215 Pfam PF13702 Lysozyme-like 45 199 1.2E-48 T 14-10-2018 MC28_G289 31a42db8a8cdf81eb6a325f708b389ca 215 SUPERFAMILY SSF53955 49 142 1.01E-7 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_G289 31a42db8a8cdf81eb6a325f708b389ca 215 Gene3D G3DSA:1.10.530.10 42 199 1.0E-43 T 14-10-2018 MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 SMART SM00843 1281 1346 7.5E-38 T 14-10-2018 IPR018541 FtsK gamma domain MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 Pfam PF01580 FtsK/SpoIIIE family 1135 1186 1.0E-15 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 Pfam PF01580 FtsK/SpoIIIE family 994 1129 3.5E-47 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 SUPERFAMILY SSF46785 1281 1347 1.35E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 Gene3D G3DSA:3.40.50.300 991 1270 8.7E-113 T 14-10-2018 MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 Pfam PF09397 Ftsk gamma domain 1283 1343 2.6E-27 T 14-10-2018 IPR018541 FtsK gamma domain MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 SMART SM00382 1029 1207 0.002 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 Gene3D G3DSA:1.10.10.10 1275 1342 9.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 SUPERFAMILY SSF52540 967 1259 8.67E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3969 223ef11e46ac88a319ae9c32496b90c3 1356 Gene3D G3DSA:3.30.980.40 887 990 2.7E-36 T 14-10-2018 MC28_4368 4d02b65ba347bbdcd40bf5138c9d7e7f 509 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 3 508 2.0E-211 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4368 4d02b65ba347bbdcd40bf5138c9d7e7f 509 SUPERFAMILY SSF53649 2 508 5.06E-75 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_4368 4d02b65ba347bbdcd40bf5138c9d7e7f 509 SUPERFAMILY SSF64158 76 309 1.83E-92 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4368 4d02b65ba347bbdcd40bf5138c9d7e7f 509 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 298 8.8E-85 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4368 4d02b65ba347bbdcd40bf5138c9d7e7f 509 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 509 49.843 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4368 4d02b65ba347bbdcd40bf5138c9d7e7f 509 Gene3D G3DSA:3.40.1450.10 76 311 3.1E-237 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4368 4d02b65ba347bbdcd40bf5138c9d7e7f 509 PIRSF PIRSF001492 1 509 1.1E-205 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MC28_4368 4d02b65ba347bbdcd40bf5138c9d7e7f 509 Pfam PF01676 Metalloenzyme superfamily 3 497 5.7E-77 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 MC28_4368 4d02b65ba347bbdcd40bf5138c9d7e7f 509 Gene3D G3DSA:3.40.720.10 4 506 3.1E-237 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_4985 e21b9c4df11c5a7fc0c10dc4b3b27da5 265 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 263 17.603 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_4985 e21b9c4df11c5a7fc0c10dc4b3b27da5 265 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 256 7.0E-85 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_4985 e21b9c4df11c5a7fc0c10dc4b3b27da5 265 Pfam PF02673 Bacitracin resistance protein BacA 7 258 3.5E-79 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_C054 8f70dec485b07fd4ea29044a60463ba8 93 SUPERFAMILY SSF89447 1 51 5.89E-16 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily MC28_C054 8f70dec485b07fd4ea29044a60463ba8 93 SMART SM00966 8 51 3.9E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_C054 8f70dec485b07fd4ea29044a60463ba8 93 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 1.1E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_C054 8f70dec485b07fd4ea29044a60463ba8 93 Gene3D G3DSA:2.10.260.10 1 54 2.5E-25 T 14-10-2018 MC28_C054 8f70dec485b07fd4ea29044a60463ba8 93 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 1.1E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_0566 2232aa5a0ee327fa8ea592b381b3351b 148 Gene3D G3DSA:1.10.10.10 1 147 9.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0566 2232aa5a0ee327fa8ea592b381b3351b 148 Pfam PF01047 MarR family 40 97 5.7E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0566 2232aa5a0ee327fa8ea592b381b3351b 148 SMART SM00347 33 133 5.7E-30 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0566 2232aa5a0ee327fa8ea592b381b3351b 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site MC28_0566 2232aa5a0ee327fa8ea592b381b3351b 148 SUPERFAMILY SSF46785 8 145 2.81E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0566 2232aa5a0ee327fa8ea592b381b3351b 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 8.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0566 2232aa5a0ee327fa8ea592b381b3351b 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 8.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0566 2232aa5a0ee327fa8ea592b381b3351b 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 8.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_D176 40086a46dbb4b4d069e6ab872e401a13 487 Pfam PF01609 Transposase DDE domain 129 395 1.3E-44 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_D176 40086a46dbb4b4d069e6ab872e401a13 487 SUPERFAMILY SSF53098 44 480 8.34E-78 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_F088 40086a46dbb4b4d069e6ab872e401a13 487 Pfam PF01609 Transposase DDE domain 129 395 1.3E-44 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_F088 40086a46dbb4b4d069e6ab872e401a13 487 SUPERFAMILY SSF53098 44 480 8.34E-78 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_G062 40086a46dbb4b4d069e6ab872e401a13 487 Pfam PF01609 Transposase DDE domain 129 395 1.3E-44 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_G062 40086a46dbb4b4d069e6ab872e401a13 487 SUPERFAMILY SSF53098 44 480 8.34E-78 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_0146 94e7adabc7d7d8cc30c53eca0304f1c8 516 Gene3D G3DSA:3.30.300.310 413 515 1.5E-33 T 14-10-2018 MC28_0146 94e7adabc7d7d8cc30c53eca0304f1c8 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 501 7.5E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_0146 94e7adabc7d7d8cc30c53eca0304f1c8 516 SUPERFAMILY SSF56801 2 512 2.35E-147 T 14-10-2018 MC28_0146 94e7adabc7d7d8cc30c53eca0304f1c8 516 Gene3D G3DSA:3.40.50.12780 6 412 1.5E-113 T 14-10-2018 MC28_0146 94e7adabc7d7d8cc30c53eca0304f1c8 516 Pfam PF00501 AMP-binding enzyme 10 416 6.1E-100 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_0146 94e7adabc7d7d8cc30c53eca0304f1c8 516 ProSitePatterns PS00455 Putative AMP-binding domain signature. 164 175 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_0690 8d67165c3052e3711771af7985ea101f 653 Gene3D G3DSA:1.10.3810.10 32 229 1.8E-74 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_0690 8d67165c3052e3711771af7985ea101f 653 SUPERFAMILY SSF56601 195 607 6.64E-111 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_0690 8d67165c3052e3711771af7985ea101f 653 Pfam PF00905 Penicillin binding protein transpeptidase domain 309 586 4.0E-38 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_0690 8d67165c3052e3711771af7985ea101f 653 Gene3D G3DSA:3.40.710.10 241 591 5.0E-123 T 14-10-2018 MC28_0690 8d67165c3052e3711771af7985ea101f 653 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 51 590 6.5E-184 T 14-10-2018 MC28_0690 8d67165c3052e3711771af7985ea101f 653 SUPERFAMILY SSF53955 28 235 7.87E-73 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_0690 8d67165c3052e3711771af7985ea101f 653 Pfam PF00912 Transglycosylase 42 213 1.7E-61 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_5144 33717e221fa6468e11221942bd54e3af 364 Gene3D G3DSA:1.20.1420.30 71 355 1.7E-23 T 14-10-2018 MC28_5144 33717e221fa6468e11221942bd54e3af 364 Pfam PF01699 Sodium/calcium exchanger protein 219 356 3.3E-19 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 MC28_5144 33717e221fa6468e11221942bd54e3af 364 Pfam PF01699 Sodium/calcium exchanger protein 41 192 3.0E-19 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 MC28_5144 33717e221fa6468e11221942bd54e3af 364 TIGRFAM TIGR00378 cax: calcium/proton exchanger 24 362 3.1E-143 T 14-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 MC28_5144 33717e221fa6468e11221942bd54e3af 364 Gene3D G3DSA:1.20.58.1130 209 251 1.7E-23 T 14-10-2018 MC28_5144 33717e221fa6468e11221942bd54e3af 364 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 19 361 5.3E-119 T 14-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 MC28_5054 62846f21c8929669836c8d06ff091837 369 SUPERFAMILY SSF51604 112 363 4.59E-68 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily MC28_5054 62846f21c8929669836c8d06ff091837 369 Pfam PF13378 Enolase C-terminal domain-like 144 356 1.9E-49 T 14-10-2018 IPR029065 Enolase C-terminal domain-like MC28_5054 62846f21c8929669836c8d06ff091837 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 124 3.3E-20 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain MC28_5054 62846f21c8929669836c8d06ff091837 369 Gene3D G3DSA:3.30.390.10 1 356 4.5E-145 T 14-10-2018 IPR029017 Enolase-like, N-terminal MC28_5054 62846f21c8929669836c8d06ff091837 369 SMART SM00922 142 239 3.9E-28 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal MC28_5054 62846f21c8929669836c8d06ff091837 369 Gene3D G3DSA:3.20.20.120 116 350 4.5E-145 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily MC28_5054 62846f21c8929669836c8d06ff091837 369 SUPERFAMILY SSF54826 1 125 2.36E-35 T 14-10-2018 MC28_2136 a24bf6ecfffb20f977ea706d97a4423b 1041 Pfam PF03176 MMPL family 724 1031 2.1E-39 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 MC28_2136 a24bf6ecfffb20f977ea706d97a4423b 1041 Pfam PF03176 MMPL family 45 369 2.8E-60 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 MC28_2136 a24bf6ecfffb20f977ea706d97a4423b 1041 Gene3D G3DSA:1.20.1640.10 145 342 1.7E-8 T 14-10-2018 MC28_2136 a24bf6ecfffb20f977ea706d97a4423b 1041 SUPERFAMILY SSF82866 143 340 5.36E-31 T 14-10-2018 MC28_2136 a24bf6ecfffb20f977ea706d97a4423b 1041 SUPERFAMILY SSF82866 864 1029 2.75E-22 T 14-10-2018 MC28_D025 6a69e8353b9a825c0957b8a96bac95a9 140 Pfam PF13702 Lysozyme-like 76 133 6.0E-14 T 14-10-2018 MC28_D025 6a69e8353b9a825c0957b8a96bac95a9 140 Gene3D G3DSA:1.10.530.10 71 140 2.4E-15 T 14-10-2018 MC28_D125 6a69e8353b9a825c0957b8a96bac95a9 140 Pfam PF13702 Lysozyme-like 76 133 6.0E-14 T 14-10-2018 MC28_D125 6a69e8353b9a825c0957b8a96bac95a9 140 Gene3D G3DSA:1.10.530.10 71 140 2.4E-15 T 14-10-2018 MC28_3824 78e51d174eac3d0d818fb137c0c8395a 256 Gene3D G3DSA:3.40.50.300 1 253 5.3E-66 T 14-10-2018 MC28_3824 78e51d174eac3d0d818fb137c0c8395a 256 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3824 78e51d174eac3d0d818fb137c0c8395a 256 SMART SM00382 26 215 8.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3824 78e51d174eac3d0d818fb137c0c8395a 256 SUPERFAMILY SSF52540 1 224 4.69E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3824 78e51d174eac3d0d818fb137c0c8395a 256 Pfam PF00005 ABC transporter 17 165 1.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2809 88def0e37c9753d63a671bd36ae66cb2 310 Pfam PF12679 ABC-2 family transporter protein 3 309 4.5E-15 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 MC28_1074 25e498dc7dd67dfcaec9ae77094786ec 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 15 25 8.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1074 25e498dc7dd67dfcaec9ae77094786ec 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 8.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1074 25e498dc7dd67dfcaec9ae77094786ec 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 4 15 8.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1074 25e498dc7dd67dfcaec9ae77094786ec 277 SUPERFAMILY SSF53850 79 273 1.16E-20 T 14-10-2018 MC28_1074 25e498dc7dd67dfcaec9ae77094786ec 277 Gene3D G3DSA:1.10.10.10 1 74 1.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1074 25e498dc7dd67dfcaec9ae77094786ec 277 SUPERFAMILY SSF46785 2 90 6.45E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1074 25e498dc7dd67dfcaec9ae77094786ec 277 Pfam PF03466 LysR substrate binding domain 81 271 3.0E-21 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_1074 25e498dc7dd67dfcaec9ae77094786ec 277 Gene3D G3DSA:3.40.190.290 78 277 3.2E-18 T 14-10-2018 MC28_1074 25e498dc7dd67dfcaec9ae77094786ec 277 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 47 7.8E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1201 fe8db0cdf8a0517284cf48bf9e992ca0 272 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 266 49.7 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 MC28_1201 fe8db0cdf8a0517284cf48bf9e992ca0 272 Pfam PF02540 NAD synthase 23 263 2.6E-77 T 14-10-2018 IPR022310 NAD/GMP synthase MC28_1201 fe8db0cdf8a0517284cf48bf9e992ca0 272 TIGRFAM TIGR00552 nadE: NAD+ synthetase 18 272 7.3E-82 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 MC28_1201 fe8db0cdf8a0517284cf48bf9e992ca0 272 Gene3D G3DSA:3.40.50.620 1 272 4.0E-90 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_1201 fe8db0cdf8a0517284cf48bf9e992ca0 272 SUPERFAMILY SSF52402 3 271 1.21E-82 T 14-10-2018 MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 Gene3D G3DSA:2.130.10.10 314 500 4.8E-65 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 Pfam PF10282 Lactonase, 7-bladed beta-propeller 357 478 7.4E-10 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 Pfam PF10282 Lactonase, 7-bladed beta-propeller 244 352 3.5E-9 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 Pfam PF01391 Collagen triple helix repeat (20 copies) 23 79 1.0E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 Pfam PF01391 Collagen triple helix repeat (20 copies) 73 129 8.1E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 416 456 4.8E-14 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 248 289 6.3E-17 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 290 331 3.8E-15 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 205 247 2.5E-7 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 458 497 3.2E-16 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 332 372 2.1E-14 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 375 415 1.6E-16 T 14-10-2018 IPR011964 YVTN beta-propeller repeat MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 Gene3D G3DSA:2.130.10.10 202 302 2.4E-29 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_1539 465ce15bc53c018a3c6a8f479f755895 503 SUPERFAMILY SSF50974 204 497 1.57E-82 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 MC28_1566 5a22e471a327bef9ef46d658c01b96e3 75 SUPERFAMILY SSF88697 1 75 1.14E-19 T 14-10-2018 IPR015947 PUA-like superfamily MC28_1566 5a22e471a327bef9ef46d658c01b96e3 75 Gene3D G3DSA:2.40.240.20 1 72 1.6E-25 T 14-10-2018 MC28_1566 5a22e471a327bef9ef46d658c01b96e3 75 Pfam PF10763 Protein of unknown function (DUF2584) 1 75 2.2E-26 T 14-10-2018 IPR019699 Protein of unknown function DUF2584 MC28_1167 f8663f807aee5cb217a0a842727abd64 276 Pfam PF01522 Polysaccharide deacetylase 80 197 1.8E-32 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_1167 f8663f807aee5cb217a0a842727abd64 276 SUPERFAMILY SSF88713 42 269 1.85E-65 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_1167 f8663f807aee5cb217a0a842727abd64 276 Gene3D G3DSA:3.20.20.370 62 276 4.4E-90 T 14-10-2018 MC28_0615 9d67e8228c41b58319a3e71df76c94cb 302 Pfam PF01636 Phosphotransferase enzyme family 23 247 2.4E-25 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_0615 9d67e8228c41b58319a3e71df76c94cb 302 SUPERFAMILY SSF56112 7 260 2.88E-33 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_0615 9d67e8228c41b58319a3e71df76c94cb 302 Gene3D G3DSA:3.90.1200.10 97 299 1.3E-50 T 14-10-2018 MC28_0615 9d67e8228c41b58319a3e71df76c94cb 302 Gene3D G3DSA:3.30.200.20 1 96 3.2E-22 T 14-10-2018 MC28_5052 69ec0177843a5e74b5abf607c6d8fc2e 214 Pfam PF01863 Protein of unknown function DUF45 2 206 2.7E-60 T 14-10-2018 IPR002725 Protein of unknown function DUF45 MC28_5052 69ec0177843a5e74b5abf607c6d8fc2e 214 Gene3D G3DSA:3.30.2010.10 114 209 1.1E-16 T 14-10-2018 MC28_4667 727762782ebd47489ca83dc061fce3b0 323 SUPERFAMILY SSF53448 3 225 5.2E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4667 727762782ebd47489ca83dc061fce3b0 323 Gene3D G3DSA:3.90.550.10 1 204 3.3E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4667 727762782ebd47489ca83dc061fce3b0 323 Pfam PF00535 Glycosyl transferase family 2 6 166 1.8E-31 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_2870 e6278984492a0623acb9c06c6011de73 318 Gene3D G3DSA:3.40.50.300 25 223 1.8E-58 T 14-10-2018 MC28_2870 e6278984492a0623acb9c06c6011de73 318 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 92 222 1.0E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_2870 e6278984492a0623acb9c06c6011de73 318 PRINTS PR00819 CbxX/CfqX superfamily signature 194 211 1.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 MC28_2870 e6278984492a0623acb9c06c6011de73 318 PRINTS PR00819 CbxX/CfqX superfamily signature 91 106 1.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 MC28_2870 e6278984492a0623acb9c06c6011de73 318 PRINTS PR00819 CbxX/CfqX superfamily signature 143 162 1.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 MC28_2870 e6278984492a0623acb9c06c6011de73 318 PRINTS PR00819 CbxX/CfqX superfamily signature 271 283 1.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 MC28_2870 e6278984492a0623acb9c06c6011de73 318 PRINTS PR00819 CbxX/CfqX superfamily signature 211 230 1.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 MC28_2870 e6278984492a0623acb9c06c6011de73 318 PRINTS PR00819 CbxX/CfqX superfamily signature 129 143 1.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 MC28_2870 e6278984492a0623acb9c06c6011de73 318 PRINTS PR00819 CbxX/CfqX superfamily signature 173 185 1.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 MC28_2870 e6278984492a0623acb9c06c6011de73 318 PRINTS PR00819 CbxX/CfqX superfamily signature 51 65 1.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 MC28_2870 e6278984492a0623acb9c06c6011de73 318 SMART SM00382 88 226 3.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2870 e6278984492a0623acb9c06c6011de73 318 Gene3D G3DSA:1.10.8.60 224 314 1.0E-17 T 14-10-2018 MC28_2870 e6278984492a0623acb9c06c6011de73 318 TIGRFAM TIGR02881 spore_V_K: stage V sporulation protein K 48 309 8.7E-134 T 14-10-2018 IPR014232 Sporulation stage V, protein K MC28_2870 e6278984492a0623acb9c06c6011de73 318 SUPERFAMILY SSF52540 53 308 6.0E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_D072 800a205327e65595c069ae1027abb72d 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 464 1.7E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_D072 800a205327e65595c069ae1027abb72d 545 Gene3D G3DSA:3.10.105.10 294 516 3.2E-176 T 14-10-2018 MC28_D072 800a205327e65595c069ae1027abb72d 545 Gene3D G3DSA:3.90.76.10 73 194 3.2E-176 T 14-10-2018 MC28_D072 800a205327e65595c069ae1027abb72d 545 PIRSF PIRSF002741 1 545 2.2E-107 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_D072 800a205327e65595c069ae1027abb72d 545 Gene3D G3DSA:3.40.190.10 54 533 3.2E-176 T 14-10-2018 MC28_D072 800a205327e65595c069ae1027abb72d 545 SUPERFAMILY SSF53850 38 540 2.33E-124 T 14-10-2018 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 1.1E-159 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 Gene3D G3DSA:1.10.580.10 23 343 1.8E-124 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 SUPERFAMILY SSF48256 2 371 6.15E-134 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 PRINTS PR00143 Citrate synthase signature 324 338 1.1E-40 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 PRINTS PR00143 Citrate synthase signature 172 187 1.1E-40 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 PRINTS PR00143 Citrate synthase signature 194 222 1.1E-40 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 PRINTS PR00143 Citrate synthase signature 247 267 1.1E-40 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 PRINTS PR00143 Citrate synthase signature 123 136 1.1E-40 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 PRINTS PR00143 Citrate synthase signature 304 320 1.1E-40 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 Gene3D G3DSA:1.10.230.10 220 318 1.8E-124 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 1.5E-126 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 MC28_3872 779fbc2467ad791e9f5d7b260a08c8ac 371 PIRSF PIRSF001369 1 371 7.5E-151 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type MC28_G086 771fba69a106816b62876101659615b3 185 Gene3D G3DSA:3.40.30.10 36 184 4.5E-9 T 14-10-2018 MC28_G086 771fba69a106816b62876101659615b3 185 SUPERFAMILY SSF52833 51 160 6.01E-9 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_0892 dbe733e266986258791fd92839154946 524 Pfam PF01514 Secretory protein of YscJ/FliF family 21 211 2.5E-42 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF MC28_0892 dbe733e266986258791fd92839154946 524 Gene3D G3DSA:3.30.300.30 108 216 6.3E-7 T 14-10-2018 MC28_0892 dbe733e266986258791fd92839154946 524 PRINTS PR01009 Flagellar M-ring protein signature 187 205 1.4E-7 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MC28_0892 dbe733e266986258791fd92839154946 524 PRINTS PR01009 Flagellar M-ring protein signature 337 361 1.4E-7 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MC28_0892 dbe733e266986258791fd92839154946 524 PRINTS PR01009 Flagellar M-ring protein signature 143 157 1.4E-7 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MC28_0892 dbe733e266986258791fd92839154946 524 Pfam PF08345 Flagellar M-ring protein C-terminal 247 407 8.7E-19 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal MC28_0091 6d2a3b41099d40b6a17419bde66a8a80 820 Gene3D G3DSA:1.20.1270.90 664 744 2.3E-7 T 14-10-2018 MC28_0091 6d2a3b41099d40b6a17419bde66a8a80 820 Gene3D G3DSA:3.60.21.10 28 311 4.0E-34 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_0091 6d2a3b41099d40b6a17419bde66a8a80 820 SUPERFAMILY SSF49899 452 655 5.7E-29 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily MC28_0091 6d2a3b41099d40b6a17419bde66a8a80 820 SUPERFAMILY SSF49265 345 443 2.32E-6 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_0091 6d2a3b41099d40b6a17419bde66a8a80 820 SUPERFAMILY SSF56300 47 307 1.25E-36 T 14-10-2018 MC28_0091 6d2a3b41099d40b6a17419bde66a8a80 820 Gene3D G3DSA:2.60.40.10 342 437 6.7E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0091 6d2a3b41099d40b6a17419bde66a8a80 820 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 504 649 6.0E-16 T 14-10-2018 MC28_0091 6d2a3b41099d40b6a17419bde66a8a80 820 Gene3D G3DSA:2.60.120.200 438 656 2.1E-23 T 14-10-2018 MC28_0091 6d2a3b41099d40b6a17419bde66a8a80 820 Pfam PF00149 Calcineurin-like phosphoesterase 52 243 1.6E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 PRINTS PR00113 Alkaline phosphatase signature 252 281 2.4E-45 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 PRINTS PR00113 Alkaline phosphatase signature 99 114 2.4E-45 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 PRINTS PR00113 Alkaline phosphatase signature 44 64 2.4E-45 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 PRINTS PR00113 Alkaline phosphatase signature 136 156 2.4E-45 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 PRINTS PR00113 Alkaline phosphatase signature 186 196 2.4E-45 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 Pfam PF00245 Alkaline phosphatase 44 450 7.8E-134 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 Gene3D G3DSA:1.10.60.40 328 413 4.8E-148 T 14-10-2018 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 SMART SM00098 45 454 1.9E-197 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 ProSitePatterns PS00123 Alkaline phosphatase active site. 99 107 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 Gene3D G3DSA:3.40.720.10 48 444 4.8E-148 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_3638 089e920f6d7867f2077516414ecd0e54 461 SUPERFAMILY SSF53649 37 452 6.4E-131 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_0088 f3c0bab08b99df1281086399fc273a75 104 Pfam PF13157 Protein of unknown function (DUF3992) 5 99 6.7E-37 T 14-10-2018 IPR025055 Protein of unknown function DUF3992 MC28_2043 958c5425f62e756dc77edc201d49fe32 76 SUPERFAMILY SSF46785 14 75 4.75E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5350 199815c65279bae75bfe13a9eb222c46 509 Gene3D G3DSA:3.30.870.10 133 323 9.7E-47 T 14-10-2018 MC28_5350 199815c65279bae75bfe13a9eb222c46 509 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 36 509 1.3E-147 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 MC28_5350 199815c65279bae75bfe13a9eb222c46 509 SUPERFAMILY SSF56024 99 338 9.42E-51 T 14-10-2018 MC28_5350 199815c65279bae75bfe13a9eb222c46 509 Pfam PF13396 Phospholipase_D-nuclease N-terminal 39 81 2.2E-9 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal MC28_5350 199815c65279bae75bfe13a9eb222c46 509 SMART SM00155 238 265 3.2E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_5350 199815c65279bae75bfe13a9eb222c46 509 SMART SM00155 422 449 2.4E-7 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_5350 199815c65279bae75bfe13a9eb222c46 509 Gene3D G3DSA:3.30.870.10 328 480 4.9E-28 T 14-10-2018 MC28_5350 199815c65279bae75bfe13a9eb222c46 509 Pfam PF13091 PLD-like domain 351 476 2.8E-26 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_5350 199815c65279bae75bfe13a9eb222c46 509 Pfam PF13091 PLD-like domain 155 298 4.4E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_5350 199815c65279bae75bfe13a9eb222c46 509 Hamap MF_01916 Cardiolipin synthase. 33 509 41.186 T 14-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 MC28_5350 199815c65279bae75bfe13a9eb222c46 509 SUPERFAMILY SSF56024 290 493 7.63E-45 T 14-10-2018 MC28_0285 26618b3cf67bbfc7c70616600170fd63 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 1.3E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0285 26618b3cf67bbfc7c70616600170fd63 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MC28_0285 26618b3cf67bbfc7c70616600170fd63 193 SUPERFAMILY SSF46689 5 64 2.92E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_0285 26618b3cf67bbfc7c70616600170fd63 193 SUPERFAMILY SSF48498 84 172 4.58E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_0285 26618b3cf67bbfc7c70616600170fd63 193 Gene3D G3DSA:1.10.357.10 65 190 6.7E-9 T 14-10-2018 MC28_0285 26618b3cf67bbfc7c70616600170fd63 193 Gene3D G3DSA:1.10.10.60 6 64 8.8E-17 T 14-10-2018 MC28_0285 26618b3cf67bbfc7c70616600170fd63 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.5E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0285 26618b3cf67bbfc7c70616600170fd63 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.5E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2274 332d14354db68e4d21b6f57491987592 235 Pfam PF12840 Helix-turn-helix domain 10 68 3.1E-10 T 14-10-2018 MC28_2274 332d14354db68e4d21b6f57491987592 235 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 7.1E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2274 332d14354db68e4d21b6f57491987592 235 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 7.1E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2274 332d14354db68e4d21b6f57491987592 235 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 7.1E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2274 332d14354db68e4d21b6f57491987592 235 SUPERFAMILY SSF46785 5 86 2.26E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2274 332d14354db68e4d21b6f57491987592 235 Gene3D G3DSA:1.10.10.10 3 90 7.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2274 332d14354db68e4d21b6f57491987592 235 SMART SM00418 9 88 2.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_G063 ec6f7d41632c6bd94dd4247c339240bd 469 Gene3D G3DSA:1.20.1740.10 8 465 8.2E-64 T 14-10-2018 MC28_G063 ec6f7d41632c6bd94dd4247c339240bd 469 ProSitePatterns PS00218 Amino acid permeases signature. 42 73 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 MC28_G063 ec6f7d41632c6bd94dd4247c339240bd 469 Pfam PF00324 Amino acid permease 17 457 2.1E-117 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_G063 ec6f7d41632c6bd94dd4247c339240bd 469 PIRSF PIRSF006060 1 468 3.5E-77 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5194 1a58f580222d95848e5653e301673dbc 308 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 1 273 2.0E-38 T 14-10-2018 IPR006427 Phage portal protein, HK97 MC28_5194 1a58f580222d95848e5653e301673dbc 308 Pfam PF04860 Phage portal protein 1 268 1.8E-27 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein MC28_0909 17498c53ea8f28f633db8fd052ac5c24 119 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 30 99 9.9E-17 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) MC28_0909 17498c53ea8f28f633db8fd052ac5c24 119 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 91 1.1E-10 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MC28_0909 17498c53ea8f28f633db8fd052ac5c24 119 PRINTS PR00956 Flagellar motor switch protein FliN signature 63 76 1.1E-10 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MC28_0909 17498c53ea8f28f633db8fd052ac5c24 119 PRINTS PR00956 Flagellar motor switch protein FliN signature 47 63 1.1E-10 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MC28_0909 17498c53ea8f28f633db8fd052ac5c24 119 PRINTS PR00956 Flagellar motor switch protein FliN signature 30 46 1.1E-10 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MC28_0909 17498c53ea8f28f633db8fd052ac5c24 119 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 27 102 3.8E-25 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 MC28_0909 17498c53ea8f28f633db8fd052ac5c24 119 SUPERFAMILY SSF101801 27 103 3.53E-17 T 14-10-2018 IPR036429 SpoA-like superfamily MC28_0909 17498c53ea8f28f633db8fd052ac5c24 119 Gene3D G3DSA:2.30.330.10 17 110 1.3E-18 T 14-10-2018 IPR036429 SpoA-like superfamily MC28_2340 8288db0c66c0edab0af8420ef249b4eb 367 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 8 361 4.6E-64 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_2340 8288db0c66c0edab0af8420ef249b4eb 367 Pfam PF03845 Spore germination protein 9 318 2.2E-60 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_2340 8288db0c66c0edab0af8420ef249b4eb 367 Gene3D G3DSA:1.20.1740.10 5 301 4.4E-12 T 14-10-2018 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 SUPERFAMILY SSF52418 67 327 7.06E-94 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 Pfam PF00591 Glycosyl transferase family, a/b domain 75 304 6.6E-50 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 64 1.8E-20 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 PIRSF PIRSF000478 1 430 2.3E-170 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 SUPERFAMILY SSF54680 329 430 2.75E-30 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 Gene3D G3DSA:1.20.970.10 1 65 8.2E-28 T 14-10-2018 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 108 123 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 SMART SM00941 343 416 1.3E-32 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 Gene3D G3DSA:3.90.1170.30 329 418 2.6E-155 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 343 416 3.2E-27 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 Gene3D G3DSA:3.40.1030.10 75 328 2.6E-155 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 1 416 1.5E-183 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_3378 e2d3af13fbe1b9ca03f00cf8e867f943 432 SUPERFAMILY SSF47648 1 67 1.09E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_5409 374ccb09afeba93cca077bd7ff492f6d 420 Pfam PF06725 3D domain 361 420 1.3E-19 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 MC28_5409 374ccb09afeba93cca077bd7ff492f6d 420 SUPERFAMILY SSF50685 360 400 1.15E-7 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_4991 fba7f44c56798751c262423274ed12be 358 Pfam PF14307 Glycosyltransferase WbsX 3 339 5.8E-137 T 14-10-2018 IPR032719 Glycosyltransferase WbsX MC28_4991 fba7f44c56798751c262423274ed12be 358 Gene3D G3DSA:3.20.20.80 1 356 1.1E-11 T 14-10-2018 MC28_0323 aea4a84a3378af81c001b96a0f74ecc5 244 SUPERFAMILY SSF56281 1 242 6.94E-57 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_0323 aea4a84a3378af81c001b96a0f74ecc5 244 Gene3D G3DSA:3.60.15.10 1 244 1.5E-102 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_0323 aea4a84a3378af81c001b96a0f74ecc5 244 Pfam PF12706 Beta-lactamase superfamily domain 30 211 2.6E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_0323 aea4a84a3378af81c001b96a0f74ecc5 244 SMART SM00849 18 211 1.1E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_5057 2d259b1ae26364f36f7f5a7cf2088e87 371 SUPERFAMILY SSF53187 5 369 4.49E-62 T 14-10-2018 MC28_5057 2d259b1ae26364f36f7f5a7cf2088e87 371 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 10 352 1.6E-84 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_5057 2d259b1ae26364f36f7f5a7cf2088e87 371 PIRSF PIRSF005962 1 371 7.1E-90 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_5057 2d259b1ae26364f36f7f5a7cf2088e87 371 SUPERFAMILY SSF55031 169 276 3.29E-19 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_5057 2d259b1ae26364f36f7f5a7cf2088e87 371 Gene3D G3DSA:3.30.70.360 166 277 4.6E-77 T 14-10-2018 MC28_5057 2d259b1ae26364f36f7f5a7cf2088e87 371 Pfam PF07687 Peptidase dimerisation domain 175 263 7.4E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_5057 2d259b1ae26364f36f7f5a7cf2088e87 371 Gene3D G3DSA:3.40.630.10 11 352 4.6E-77 T 14-10-2018 MC28_5057 2d259b1ae26364f36f7f5a7cf2088e87 371 Pfam PF01546 Peptidase family M20/M25/M40 66 364 1.2E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_2412 bb8fca4104f8f7019a4203452198b5fc 239 Gene3D G3DSA:3.30.1380.10 43 235 5.5E-64 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_2412 bb8fca4104f8f7019a4203452198b5fc 239 SUPERFAMILY SSF55166 72 222 9.42E-32 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_2412 bb8fca4104f8f7019a4203452198b5fc 239 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 74 215 5.5E-45 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 MC28_3551 0d314a8557f43226f8157525dd956acd 170 Gene3D G3DSA:3.40.50.850 5 168 2.7E-34 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_3551 0d314a8557f43226f8157525dd956acd 170 SUPERFAMILY SSF52499 7 165 2.62E-35 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_3551 0d314a8557f43226f8157525dd956acd 170 Pfam PF00857 Isochorismatase family 7 142 1.2E-28 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_5033 0d61f626446e8d71c95708bb8fa91740 79 Pfam PF05360 yiaA/B two helix domain 10 62 2.0E-18 T 14-10-2018 IPR008024 YiaAB two helix MC28_3920 ea6b810efd42396b2b1a76f64a9a0e0a 267 Gene3D G3DSA:3.40.50.10330 38 267 5.8E-72 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 MC28_3920 ea6b810efd42396b2b1a76f64a9a0e0a 267 Gene3D G3DSA:2.60.200.30 109 245 5.8E-72 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 MC28_3920 ea6b810efd42396b2b1a76f64a9a0e0a 267 Hamap MF_00361 NAD kinase [nadK]. 5 264 20.295 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 MC28_3920 ea6b810efd42396b2b1a76f64a9a0e0a 267 Pfam PF01513 ATP-NAD kinase 39 252 1.3E-16 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 MC28_3920 ea6b810efd42396b2b1a76f64a9a0e0a 267 SUPERFAMILY SSF111331 6 266 4.91E-56 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily MC28_1891 9a1a22e5e059f3dd3dbd60b806d8d0c9 131 Pfam PF01042 Endoribonuclease L-PSP 13 129 2.8E-31 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 MC28_1891 9a1a22e5e059f3dd3dbd60b806d8d0c9 131 SUPERFAMILY SSF55298 4 130 2.67E-35 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 MC28_1891 9a1a22e5e059f3dd3dbd60b806d8d0c9 131 Gene3D G3DSA:3.30.1330.40 3 131 5.1E-36 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 MC28_1479 de389f14c4e51106286d83bd3bb920ca 156 SMART SM00014 30 143 3.3E-24 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MC28_1479 de389f14c4e51106286d83bd3bb920ca 156 SUPERFAMILY SSF48317 2 148 9.55E-32 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily MC28_1479 de389f14c4e51106286d83bd3bb920ca 156 Pfam PF01569 PAP2 superfamily 40 148 1.2E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MC28_1479 de389f14c4e51106286d83bd3bb920ca 156 Gene3D G3DSA:1.20.144.10 59 155 1.7E-25 T 14-10-2018 MC28_4765 a9f7a716773ba71e3cd16d6b282ed8c8 308 Gene3D G3DSA:3.40.50.2020 144 284 1.2E-127 T 14-10-2018 MC28_4765 a9f7a716773ba71e3cd16d6b282ed8c8 308 SUPERFAMILY SSF53271 66 300 4.53E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_4765 a9f7a716773ba71e3cd16d6b282ed8c8 308 Gene3D G3DSA:3.40.50.2020 4 296 1.2E-127 T 14-10-2018 MC28_4765 a9f7a716773ba71e3cd16d6b282ed8c8 308 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 1.4E-52 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 MC28_4765 a9f7a716773ba71e3cd16d6b282ed8c8 308 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 308 51.753 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 MC28_4765 a9f7a716773ba71e3cd16d6b282ed8c8 308 SMART SM01400 1 117 1.4E-82 T 14-10-2018 MC28_4765 a9f7a716773ba71e3cd16d6b282ed8c8 308 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 2 308 5.0E-132 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 MC28_4765 a9f7a716773ba71e3cd16d6b282ed8c8 308 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 MC28_4765 a9f7a716773ba71e3cd16d6b282ed8c8 308 Pfam PF14572 Phosphoribosyl synthetase-associated domain 199 307 4.3E-25 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 MC28_0714 758160e1424f6ffd503eba0345eb3cfb 206 SUPERFAMILY SSF54106 163 205 4.32E-10 T 14-10-2018 MC28_0714 758160e1424f6ffd503eba0345eb3cfb 206 Pfam PF01476 LysM domain 164 205 2.5E-12 T 14-10-2018 IPR018392 LysM domain MC28_0714 758160e1424f6ffd503eba0345eb3cfb 206 Gene3D G3DSA:3.10.350.10 161 206 1.6E-13 T 14-10-2018 IPR036779 LysM domain superfamily MC28_0714 758160e1424f6ffd503eba0345eb3cfb 206 SUPERFAMILY SSF51261 27 151 4.13E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0714 758160e1424f6ffd503eba0345eb3cfb 206 SMART SM00257 163 206 8.5E-10 T 14-10-2018 IPR018392 LysM domain MC28_0714 758160e1424f6ffd503eba0345eb3cfb 206 Gene3D G3DSA:2.70.70.10 17 152 1.3E-39 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0714 758160e1424f6ffd503eba0345eb3cfb 206 Pfam PF01551 Peptidase family M23 48 141 4.1E-29 T 14-10-2018 IPR016047 Peptidase M23 MC28_4796 f75f31b3e70d166158d9f97e7fc5657b 357 Gene3D G3DSA:1.20.1260.110 144 289 2.9E-46 T 14-10-2018 IPR038331 DisA, linker domain superfamily MC28_4796 f75f31b3e70d166158d9f97e7fc5657b 357 Pfam PF10635 DisA bacterial checkpoint controller linker region 143 281 8.7E-51 T 14-10-2018 IPR018906 DNA integrity scanning, DisA, linker region MC28_4796 f75f31b3e70d166158d9f97e7fc5657b 357 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 26 137 1.4E-26 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal MC28_4796 f75f31b3e70d166158d9f97e7fc5657b 357 Gene3D G3DSA:3.40.1700.10 8 143 2.3E-56 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily MC28_4796 f75f31b3e70d166158d9f97e7fc5657b 357 SUPERFAMILY SSF143597 17 143 2.88E-28 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily MC28_4796 f75f31b3e70d166158d9f97e7fc5657b 357 Gene3D G3DSA:1.10.150.20 290 351 5.2E-21 T 14-10-2018 MC28_4796 f75f31b3e70d166158d9f97e7fc5657b 357 SUPERFAMILY SSF47781 241 345 8.53E-13 T 14-10-2018 IPR010994 RuvA domain 2-like MC28_4796 f75f31b3e70d166158d9f97e7fc5657b 357 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 6 354 44.958 T 14-10-2018 IPR023763 DNA integrity scanning protein, DisA MC28_2234 a868a7e2e9adb184bdf7f21f4ac90a1e 156 Gene3D G3DSA:3.40.630.30 1 156 2.0E-40 T 14-10-2018 MC28_2234 a868a7e2e9adb184bdf7f21f4ac90a1e 156 Pfam PF00583 Acetyltransferase (GNAT) family 6 124 2.6E-15 T 14-10-2018 IPR000182 GNAT domain MC28_2234 a868a7e2e9adb184bdf7f21f4ac90a1e 156 PIRSF PIRSF037663 1 156 8.2E-73 T 14-10-2018 IPR017255 Acetyltransferase, GNAT, predicted MC28_2234 a868a7e2e9adb184bdf7f21f4ac90a1e 156 SUPERFAMILY SSF55729 1 154 1.21E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_0312 1e41d0a54ca0bbaf11989e46610a5371 190 Gene3D G3DSA:1.10.10.60 4 51 2.8E-17 T 14-10-2018 MC28_0312 1e41d0a54ca0bbaf11989e46610a5371 190 Gene3D G3DSA:1.10.357.10 52 190 1.4E-19 T 14-10-2018 MC28_0312 1e41d0a54ca0bbaf11989e46610a5371 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 3.2E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0312 1e41d0a54ca0bbaf11989e46610a5371 190 SUPERFAMILY SSF46689 4 78 2.96E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_0312 1e41d0a54ca0bbaf11989e46610a5371 190 SUPERFAMILY SSF48498 76 189 4.89E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_0312 1e41d0a54ca0bbaf11989e46610a5371 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 6.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0312 1e41d0a54ca0bbaf11989e46610a5371 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 6.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0312 1e41d0a54ca0bbaf11989e46610a5371 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MC28_1064 4d51c446ae9cd2d7ebd894f1668d5074 315 Gene3D G3DSA:3.40.50.1360 53 311 6.5E-85 T 14-10-2018 MC28_1064 4d51c446ae9cd2d7ebd894f1668d5074 315 Gene3D G3DSA:1.10.10.60 1 52 3.1E-22 T 14-10-2018 MC28_1064 4d51c446ae9cd2d7ebd894f1668d5074 315 Pfam PF04545 Sigma-70, region 4 14 47 1.4E-6 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_1064 4d51c446ae9cd2d7ebd894f1668d5074 315 SUPERFAMILY SSF88659 11 47 1.9E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_1064 4d51c446ae9cd2d7ebd894f1668d5074 315 Pfam PF04198 Putative sugar-binding domain 57 310 4.6E-78 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 MC28_1064 4d51c446ae9cd2d7ebd894f1668d5074 315 SUPERFAMILY SSF100950 56 312 1.3E-75 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_4756 5b515532b8d4fe490582d1212b740a63 292 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 19 286 1.8E-88 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 MC28_4756 5b515532b8d4fe490582d1212b740a63 292 SMART SM00650 35 211 3.3E-85 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 MC28_4756 5b515532b8d4fe490582d1212b740a63 292 Pfam PF00398 Ribosomal RNA adenine dimethylase 19 280 3.7E-76 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm MC28_4756 5b515532b8d4fe490582d1212b740a63 292 Gene3D G3DSA:1.10.8.100 219 288 3.3E-23 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 MC28_4756 5b515532b8d4fe490582d1212b740a63 292 SUPERFAMILY SSF53335 16 286 6.84E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4756 5b515532b8d4fe490582d1212b740a63 292 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 287 56.758 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 MC28_4756 5b515532b8d4fe490582d1212b740a63 292 Gene3D G3DSA:3.40.50.150 1 215 4.7E-75 T 14-10-2018 MC28_4756 5b515532b8d4fe490582d1212b740a63 292 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 78 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 MC28_F212 ed77421be4f17c148517cd427275ccae 278 Pfam PF00005 ABC transporter 17 152 1.7E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_F212 ed77421be4f17c148517cd427275ccae 278 SMART SM00382 26 202 3.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_F212 ed77421be4f17c148517cd427275ccae 278 SUPERFAMILY SSF52540 2 212 3.18E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F212 ed77421be4f17c148517cd427275ccae 278 Gene3D G3DSA:3.40.50.300 1 219 8.8E-36 T 14-10-2018 MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 SUPERFAMILY SSF52540 11 206 1.94E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 Gene3D G3DSA:3.30.300.20 186 300 1.0E-43 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 Gene3D G3DSA:3.40.50.300 4 185 3.7E-52 T 14-10-2018 MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 1.1E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 102 1.1E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 279 4.9E-111 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 7.1E-26 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 SUPERFAMILY SSF54814 181 297 2.28E-43 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 169 1.1E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 Hamap MF_00367 GTPase Era [era]. 6 296 39.437 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3591 42338663cd10b0d4c06194c5e99acd62 301 Pfam PF07650 KH domain 208 285 1.5E-21 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_0126 8ebcd08ac5e80ecd880a88ed3165af9d 275 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 217 1.0E-36 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_0126 8ebcd08ac5e80ecd880a88ed3165af9d 275 SUPERFAMILY SSF53681 114 263 1.64E-37 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_0126 8ebcd08ac5e80ecd880a88ed3165af9d 275 Gene3D G3DSA:3.40.50.1860 10 256 7.6E-95 T 14-10-2018 MC28_0126 8ebcd08ac5e80ecd880a88ed3165af9d 275 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 184 194 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_0126 8ebcd08ac5e80ecd880a88ed3165af9d 275 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 256 2.7E-80 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_0126 8ebcd08ac5e80ecd880a88ed3165af9d 275 SUPERFAMILY SSF53681 10 111 1.24E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_0126 8ebcd08ac5e80ecd880a88ed3165af9d 275 Gene3D G3DSA:3.40.50.1860 99 211 7.6E-95 T 14-10-2018 MC28_0126 8ebcd08ac5e80ecd880a88ed3165af9d 275 Hamap MF_00258 Glutamate racemase [murI]. 8 259 37.917 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_3099 6da59fe766c46c2dde62e82aa9658829 356 Pfam PF00557 Metallopeptidase family M24 136 338 4.3E-69 T 14-10-2018 IPR000994 Peptidase M24 MC28_3099 6da59fe766c46c2dde62e82aa9658829 356 PRINTS PR00599 Methionine aminopeptidase-1 signature 306 318 6.9E-7 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_3099 6da59fe766c46c2dde62e82aa9658829 356 PRINTS PR00599 Methionine aminopeptidase-1 signature 208 224 6.9E-7 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_3099 6da59fe766c46c2dde62e82aa9658829 356 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 284 296 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site MC28_3099 6da59fe766c46c2dde62e82aa9658829 356 Gene3D G3DSA:3.90.230.10 127 354 3.0E-86 T 14-10-2018 MC28_3099 6da59fe766c46c2dde62e82aa9658829 356 SUPERFAMILY SSF53092 1 126 1.99E-26 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MC28_3099 6da59fe766c46c2dde62e82aa9658829 356 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 128 1.3E-24 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 MC28_3099 6da59fe766c46c2dde62e82aa9658829 356 SUPERFAMILY SSF55920 87 348 2.75E-83 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like MC28_3099 6da59fe766c46c2dde62e82aa9658829 356 Gene3D G3DSA:3.40.350.10 2 126 1.4E-33 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MC28_2808 08a53084b2e80bc692beec7eb812ef64 381 Gene3D G3DSA:3.30.70.360 178 292 2.3E-137 T 14-10-2018 MC28_2808 08a53084b2e80bc692beec7eb812ef64 381 Gene3D G3DSA:3.40.630.10 12 362 2.3E-137 T 14-10-2018 MC28_2808 08a53084b2e80bc692beec7eb812ef64 381 Pfam PF07687 Peptidase dimerisation domain 179 274 2.4E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_2808 08a53084b2e80bc692beec7eb812ef64 381 PIRSF PIRSF005962 2 380 9.3E-130 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_2808 08a53084b2e80bc692beec7eb812ef64 381 SUPERFAMILY SSF53187 5 377 3.14E-82 T 14-10-2018 MC28_2808 08a53084b2e80bc692beec7eb812ef64 381 Pfam PF01546 Peptidase family M20/M25/M40 70 374 3.2E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_2808 08a53084b2e80bc692beec7eb812ef64 381 SUPERFAMILY SSF55031 179 287 4.06E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_2808 08a53084b2e80bc692beec7eb812ef64 381 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 12 364 2.3E-124 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 SUPERFAMILY SSF50249 3 125 1.3E-50 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4825 032cab93f3c4297ac311de857fb197d4 276 Gene3D G3DSA:4.10.950.10 197 276 2.7E-38 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 SUPERFAMILY SSF50104 126 273 9.03E-62 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily MC28_4825 032cab93f3c4297ac311de857fb197d4 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 50.384 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 Gene3D G3DSA:2.30.30.30 118 196 1.3E-34 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 SMART SM01382 124 253 9.4E-94 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 4.2E-34 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 PIRSF PIRSF002158 3 276 1.1E-99 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 3.0E-141 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 Gene3D G3DSA:2.40.50.140 1 114 1.3E-48 T 14-10-2018 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 8.0E-58 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 MC28_4825 032cab93f3c4297ac311de857fb197d4 276 SMART SM01383 42 118 2.2E-47 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4663 dfff7ea49a91021e26ee37461202bf07 190 Gene3D G3DSA:1.10.357.10 2 185 1.0E-28 T 14-10-2018 MC28_4663 dfff7ea49a91021e26ee37461202bf07 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_4663 dfff7ea49a91021e26ee37461202bf07 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_4663 dfff7ea49a91021e26ee37461202bf07 190 SUPERFAMILY SSF46689 2 86 1.1E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_4663 dfff7ea49a91021e26ee37461202bf07 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 2.7E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_4099 6a15071b2fff9c664c687bd034d85a69 189 TIGRFAM TIGR01076 sortase_fam: sortase 60 182 1.0E-22 T 14-10-2018 IPR005754 Sortase family MC28_4099 6a15071b2fff9c664c687bd034d85a69 189 Gene3D G3DSA:2.40.260.10 44 189 1.8E-43 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_4099 6a15071b2fff9c664c687bd034d85a69 189 Pfam PF04203 Sortase family 61 183 5.9E-26 T 14-10-2018 IPR005754 Sortase family MC28_4099 6a15071b2fff9c664c687bd034d85a69 189 SUPERFAMILY SSF63817 30 184 7.06E-34 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 129 146 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 PRINTS PR00069 Aldo-keto reductase signature 163 192 6.1E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 PRINTS PR00069 Aldo-keto reductase signature 99 117 6.1E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 PRINTS PR00069 Aldo-keto reductase signature 129 146 6.1E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 PRINTS PR00069 Aldo-keto reductase signature 43 67 6.1E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 PRINTS PR00069 Aldo-keto reductase signature 201 225 6.1E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 Gene3D G3DSA:3.20.20.100 2 280 2.5E-123 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 SUPERFAMILY SSF51430 11 272 8.64E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 Pfam PF00248 Aldo/keto reductase family 30 198 1.3E-40 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 Pfam PF00248 Aldo/keto reductase family 206 265 2.7E-8 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 234 249 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 PIRSF PIRSF000097 119 279 4.0E-55 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 PIRSF PIRSF000097 6 122 1.2E-43 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_3390 8171a07de904aec7eac88c82f4bf7043 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 47 64 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_2190 fd523f8669883d424131489b96d07aad 160 Pfam PF11188 Protein of unknown function (DUF2975) 32 160 7.2E-40 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 MC28_4512 83d93e56d78f79f6abff0528006f7f1f 233 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 30 231 1.1E-68 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 MC28_4512 83d93e56d78f79f6abff0528006f7f1f 233 Pfam PF13614 AAA domain 61 192 1.4E-14 T 14-10-2018 IPR025669 AAA domain MC28_4512 83d93e56d78f79f6abff0528006f7f1f 233 SUPERFAMILY SSF52540 50 226 1.91E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4512 83d93e56d78f79f6abff0528006f7f1f 233 Gene3D G3DSA:3.40.50.300 3 233 1.9E-76 T 14-10-2018 MC28_4804 46a2503a7e0be14ad6bce420b264f6e9 247 Gene3D G3DSA:3.30.1330.30 1 73 4.7E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like MC28_4804 46a2503a7e0be14ad6bce420b264f6e9 247 Gene3D G3DSA:3.40.1280.10 74 243 1.4E-54 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MC28_4804 46a2503a7e0be14ad6bce420b264f6e9 247 SUPERFAMILY SSF75217 67 243 4.32E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases MC28_4804 46a2503a7e0be14ad6bce420b264f6e9 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 1.9E-22 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 MC28_4804 46a2503a7e0be14ad6bce420b264f6e9 247 SMART SM00967 5 79 3.3E-22 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 MC28_4804 46a2503a7e0be14ad6bce420b264f6e9 247 SUPERFAMILY SSF55315 3 76 3.41E-18 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like MC28_4804 46a2503a7e0be14ad6bce420b264f6e9 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 3 242 6.5E-83 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 MC28_4804 46a2503a7e0be14ad6bce420b264f6e9 247 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.4E-38 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 MC28_0822 3e02793dcc8df7ee4d00ab7a3446ab2b 330 Pfam PF04235 Protein of unknown function (DUF418) 160 319 1.7E-38 T 14-10-2018 IPR007349 Domain of unknown function DUF418 MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 SUPERFAMILY SSF48179 163 271 2.72E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 2.4E-84 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 SUPERFAMILY SSF51735 5 162 1.4E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 101 4.5E-18 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 Gene3D G3DSA:3.40.50.720 1 165 3.8E-46 T 14-10-2018 MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 Gene3D G3DSA:1.10.3730.10 166 273 2.1E-41 T 14-10-2018 MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 268 1.4E-36 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 PIRSF PIRSF000193 3 271 8.6E-80 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_3428 c7e7b4c147ad4735d81dd264a13fab31 279 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 26.331 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 610 2.3E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 SMART SM00304 303 355 1.7E-17 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 SUPERFAMILY SSF103190 92 190 7.06E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 Gene3D G3DSA:3.30.450.20 72 183 2.8E-31 T 14-10-2018 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 Pfam PF00672 HAMP domain 303 351 1.6E-16 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 SMART SM00319 33 151 3.4E-4 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 SUPERFAMILY SSF58104 323 659 5.23E-75 T 14-10-2018 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 Gene3D G3DSA:1.10.287.950 354 659 3.8E-69 T 14-10-2018 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 Gene3D G3DSA:3.30.450.20 63 271 2.8E-31 T 14-10-2018 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 SMART SM00283 384 659 1.5E-81 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 Pfam PF02743 Cache domain 46 265 7.3E-27 T 14-10-2018 IPR033479 Double Cache domain 1 MC28_G032 baed4010bf41ce4045dfd1d9931bc3e6 660 Gene3D G3DSA:1.10.8.500 303 353 2.7E-9 T 14-10-2018 MC28_5439 8fbc7fde2105ee737178354d4c712c27 240 SUPERFAMILY SSF52540 5 210 1.92E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5439 8fbc7fde2105ee737178354d4c712c27 240 Gene3D G3DSA:3.40.50.300 3 193 1.5E-43 T 14-10-2018 MC28_5439 8fbc7fde2105ee737178354d4c712c27 240 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 7.9E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_5439 8fbc7fde2105ee737178354d4c712c27 240 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 54 69 7.9E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_5439 8fbc7fde2105ee737178354d4c712c27 240 Pfam PF02421 Ferrous iron transport protein B 5 157 1.6E-60 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 Gene3D G3DSA:3.40.30.80 1 162 8.4E-52 T 14-10-2018 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 422 444 8.4E-40 T 14-10-2018 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 397 413 8.4E-40 T 14-10-2018 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 289 8.4E-40 T 14-10-2018 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 194 8.4E-40 T 14-10-2018 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 313 331 8.4E-40 T 14-10-2018 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 301 321 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 Gene3D G3DSA:3.50.50.60 173 462 1.0E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 SUPERFAMILY SSF51905 158 468 2.65E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 SUPERFAMILY SSF52833 67 158 7.04E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 SUPERFAMILY SSF52833 1 64 8.16E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 Pfam PF13192 Thioredoxin domain 89 157 3.4E-8 T 14-10-2018 IPR012336 Thioredoxin-like fold MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 280 8.6E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 174 196 8.6E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 432 450 8.6E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 206 221 8.6E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 309 333 8.6E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 399 420 8.6E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 226 236 8.6E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 294 306 8.6E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 361 377 8.6E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 Gene3D G3DSA:3.50.50.60 283 405 1.0E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 PIRSF PIRSF000238 1 472 3.2E-246 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 2 472 1.5E-231 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 MC28_5059 8e1478e460de78f31eb83c9bfff6d22d 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 173 447 6.3E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_E121 db02b79c47c81324ccc0e9502dcfaa5d 346 SUPERFAMILY SSF53686 5 310 1.26E-65 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_E121 db02b79c47c81324ccc0e9502dcfaa5d 346 Gene3D G3DSA:3.40.50.1100 6 298 6.9E-77 T 14-10-2018 MC28_E121 db02b79c47c81324ccc0e9502dcfaa5d 346 Gene3D G3DSA:3.40.50.1100 43 145 6.9E-77 T 14-10-2018 MC28_E121 db02b79c47c81324ccc0e9502dcfaa5d 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 292 7.7E-47 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_1966 14ba210a8b7bdd55d0a616aff3ddfc32 338 Pfam PF02780 Transketolase, C-terminal domain 200 322 6.2E-42 T 14-10-2018 IPR033248 Transketolase, C-terminal domain MC28_1966 14ba210a8b7bdd55d0a616aff3ddfc32 338 Gene3D G3DSA:3.40.50.920 199 331 2.4E-47 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_1966 14ba210a8b7bdd55d0a616aff3ddfc32 338 SUPERFAMILY SSF52518 1 209 9.32E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_1966 14ba210a8b7bdd55d0a616aff3ddfc32 338 Gene3D G3DSA:3.40.50.970 1 198 5.0E-81 T 14-10-2018 MC28_1966 14ba210a8b7bdd55d0a616aff3ddfc32 338 SMART SM00861 1 186 6.1E-58 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_1966 14ba210a8b7bdd55d0a616aff3ddfc32 338 SUPERFAMILY SSF52922 195 330 7.33E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 MC28_1966 14ba210a8b7bdd55d0a616aff3ddfc32 338 Pfam PF02779 Transketolase, pyrimidine binding domain 1 186 1.8E-54 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain MC28_0849 bcf5951626228ab0220af4756b1bcec3 242 Pfam PF08892 YqcI/YcgG family 29 237 2.1E-71 T 14-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 SUPERFAMILY SSF46785 6 65 8.2E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 Gene3D G3DSA:3.30.70.920 55 142 1.2E-14 T 14-10-2018 MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 Gene3D G3DSA:1.10.10.10 5 53 1.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.0E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.0E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.0E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 Pfam PF01037 Lrp/AsnC ligand binding domain 79 126 1.0E-10 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 SUPERFAMILY SSF54909 71 139 4.29E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 3.1E-14 T 14-10-2018 MC28_2344 3b74ae5bee2de779a0d57e26712c7f81 146 SMART SM00344 7 111 6.2E-31 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 MC28_F133 f673835a95a164ca2756165aff83faef 618 Pfam PF02687 FtsX-like permease family 61 151 2.6E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_F133 f673835a95a164ca2756165aff83faef 618 PIRSF PIRSF018968 1 616 4.4E-116 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_3735 0852d7c84408bb4bb5002390d4b1e2c9 96 SUPERFAMILY SSF118010 1 92 1.7E-24 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily MC28_3735 0852d7c84408bb4bb5002390d4b1e2c9 96 Pfam PF04327 Cysteine protease Prp 1 87 2.2E-19 T 14-10-2018 IPR007422 Cysteine protease Prp MC28_3735 0852d7c84408bb4bb5002390d4b1e2c9 96 Gene3D G3DSA:3.30.70.1490 1 94 8.2E-27 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily MC28_2038 902b038e994ba5dacc3e59c8d91af1d7 333 Pfam PF00877 NlpC/P60 family 223 330 2.8E-26 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_2038 902b038e994ba5dacc3e59c8d91af1d7 333 Gene3D G3DSA:2.30.30.40 23 139 4.4E-47 T 14-10-2018 MC28_2038 902b038e994ba5dacc3e59c8d91af1d7 333 Gene3D G3DSA:2.30.30.40 140 207 1.9E-35 T 14-10-2018 MC28_2038 902b038e994ba5dacc3e59c8d91af1d7 333 SUPERFAMILY SSF54001 207 332 1.13E-40 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_2038 902b038e994ba5dacc3e59c8d91af1d7 333 Gene3D G3DSA:3.90.1720.10 208 333 6.7E-41 T 14-10-2018 MC28_3532 0e51b1b373482047349e75e6da3637cc 151 PIRSF PIRSF021292 1 144 5.5E-55 T 14-10-2018 IPR016785 ComG operon protein 4 GO:0030420 MC28_3532 0e51b1b373482047349e75e6da3637cc 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 6.2E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site MC28_3532 0e51b1b373482047349e75e6da3637cc 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site MC28_3532 0e51b1b373482047349e75e6da3637cc 151 Gene3D G3DSA:3.30.700.10 6 133 2.2E-6 T 14-10-2018 MC28_3532 0e51b1b373482047349e75e6da3637cc 151 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 5.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site MC28_3532 0e51b1b373482047349e75e6da3637cc 151 SUPERFAMILY SSF54523 6 127 2.04E-13 T 14-10-2018 MC28_1774 afaa610a94e17fe4ae767ac9a10ad7e5 250 SUPERFAMILY SSF53335 42 207 1.53E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1774 afaa610a94e17fe4ae767ac9a10ad7e5 250 Pfam PF13649 Methyltransferase domain 50 131 2.7E-12 T 14-10-2018 MC28_1774 afaa610a94e17fe4ae767ac9a10ad7e5 250 Gene3D G3DSA:3.40.50.150 29 204 8.9E-20 T 14-10-2018 MC28_1671 54afca023dc683b5ff6607ace0f4b25e 296 SUPERFAMILY SSF53067 107 293 2.16E-40 T 14-10-2018 MC28_1671 54afca023dc683b5ff6607ace0f4b25e 296 Gene3D G3DSA:3.30.420.40 2 105 1.3E-64 T 14-10-2018 MC28_1671 54afca023dc683b5ff6607ace0f4b25e 296 Gene3D G3DSA:3.30.420.40 106 268 1.3E-64 T 14-10-2018 MC28_1671 54afca023dc683b5ff6607ace0f4b25e 296 SUPERFAMILY SSF53067 1 103 4.86E-19 T 14-10-2018 MC28_1671 54afca023dc683b5ff6607ace0f4b25e 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 2 251 1.7E-22 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 MC28_2335 eaa20b11393603416708cf120d492c3b 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 83 193 1.3E-8 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MC28_2335 eaa20b11393603416708cf120d492c3b 194 SUPERFAMILY SSF48498 82 194 5.24E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_2335 eaa20b11393603416708cf120d492c3b 194 SUPERFAMILY SSF46689 8 75 5.64E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2335 eaa20b11393603416708cf120d492c3b 194 Gene3D G3DSA:1.10.357.10 5 194 1.9E-37 T 14-10-2018 MC28_2335 eaa20b11393603416708cf120d492c3b 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 3.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2335 eaa20b11393603416708cf120d492c3b 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2335 eaa20b11393603416708cf120d492c3b 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_G023 39d3b5e24dd3f6101516d24c66bfc77f 204 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 19 51 1.1E-12 T 14-10-2018 IPR023833 Signal peptide, camelysin MC28_G023 39d3b5e24dd3f6101516d24c66bfc77f 204 Pfam PF12389 Camelysin metallo-endopeptidase 9 203 1.3E-89 T 14-10-2018 IPR022121 Peptidase M73, camelysin MC28_1315 9e215da278c66b581ea9db4c38f0c13a 265 Pfam PF13130 Domain of unknown function (DUF3952) 7 109 6.9E-41 T 14-10-2018 IPR025019 Domain of unknown function DUF3952 MC28_4634 40813eb554b38f66a73cb220ff230e46 269 Gene3D G3DSA:3.40.50.1110 27 255 5.3E-36 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_4634 40813eb554b38f66a73cb220ff230e46 269 SUPERFAMILY SSF52266 55 258 2.54E-37 T 14-10-2018 MC28_4634 40813eb554b38f66a73cb220ff230e46 269 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 61 246 2.2E-23 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain MC28_3150 1e9e74cf6e1d31fb20dba3ec0d12cada 64 SMART SM00530 4 59 2.8E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3150 1e9e74cf6e1d31fb20dba3ec0d12cada 64 Pfam PF01381 Helix-turn-helix 10 57 1.5E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3150 1e9e74cf6e1d31fb20dba3ec0d12cada 64 Gene3D G3DSA:1.10.260.40 1 63 1.5E-16 T 14-10-2018 MC28_3150 1e9e74cf6e1d31fb20dba3ec0d12cada 64 SUPERFAMILY SSF47413 4 59 6.98E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_4562 8422455e8859a6214fae5a90cc236c17 342 SUPERFAMILY SSF55821 15 210 2.08E-68 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily MC28_4562 8422455e8859a6214fae5a90cc236c17 342 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 16 209 2.2E-65 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 MC28_4562 8422455e8859a6214fae5a90cc236c17 342 Pfam PF01300 Telomere recombination 23 198 1.2E-58 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 MC28_4562 8422455e8859a6214fae5a90cc236c17 342 Pfam PF03481 Putative GTP-binding controlling metal-binding 200 336 8.1E-29 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain MC28_4562 8422455e8859a6214fae5a90cc236c17 342 Gene3D G3DSA:3.40.50.11030 217 342 1.3E-41 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily MC28_4562 8422455e8859a6214fae5a90cc236c17 342 PIRSF PIRSF004930 3 342 5.5E-136 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 MC28_4562 8422455e8859a6214fae5a90cc236c17 342 Gene3D G3DSA:3.90.870.10 4 214 6.7E-86 T 14-10-2018 MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 Hamap MF_00163 Peptide deformylase [def]. 2 155 27.885 T 14-10-2018 IPR023635 Peptide deformylase MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 PRINTS PR01576 Peptide deformylase signature 119 148 3.4E-35 T 14-10-2018 IPR023635 Peptide deformylase MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 PRINTS PR01576 Peptide deformylase signature 100 118 3.4E-35 T 14-10-2018 IPR023635 Peptide deformylase MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 PRINTS PR01576 Peptide deformylase signature 88 99 3.4E-35 T 14-10-2018 IPR023635 Peptide deformylase MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 PRINTS PR01576 Peptide deformylase signature 33 62 3.4E-35 T 14-10-2018 IPR023635 Peptide deformylase MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 Gene3D G3DSA:3.90.45.10 1 156 6.8E-63 T 14-10-2018 IPR036821 Peptide deformylase superfamily MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 153 6.0E-53 T 14-10-2018 IPR023635 Peptide deformylase MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 PIRSF PIRSF004749 1 155 6.8E-48 T 14-10-2018 IPR023635 Peptide deformylase MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 SUPERFAMILY SSF56420 1 148 3.27E-54 T 14-10-2018 IPR036821 Peptide deformylase superfamily MC28_3090 cfcc26a7636916f4e25b917c5e6c8522 156 Pfam PF01327 Polypeptide deformylase 4 148 1.8E-47 T 14-10-2018 IPR023635 Peptide deformylase MC28_2137 95957013553c89adb80c77cc32b21b89 188 SUPERFAMILY SSF48498 78 186 6.99E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_2137 95957013553c89adb80c77cc32b21b89 188 SUPERFAMILY SSF46689 4 66 4.19E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2137 95957013553c89adb80c77cc32b21b89 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 4.5E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2137 95957013553c89adb80c77cc32b21b89 188 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 56 187 3.4E-60 T 14-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal MC28_2137 95957013553c89adb80c77cc32b21b89 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MC28_2137 95957013553c89adb80c77cc32b21b89 188 Gene3D G3DSA:1.10.357.10 1 188 6.0E-75 T 14-10-2018 MC28_2137 95957013553c89adb80c77cc32b21b89 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.4E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_2137 95957013553c89adb80c77cc32b21b89 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.4E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0914 a8e0d9f237207330d32833555fcca8d5 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 295 316 2.6E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MC28_0914 a8e0d9f237207330d32833555fcca8d5 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 221 238 2.6E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MC28_0914 a8e0d9f237207330d32833555fcca8d5 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 265 280 2.6E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MC28_0914 a8e0d9f237207330d32833555fcca8d5 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 7 29 2.6E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MC28_0914 a8e0d9f237207330d32833555fcca8d5 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 201 219 2.6E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MC28_0914 a8e0d9f237207330d32833555fcca8d5 348 Gene3D G3DSA:3.40.1690.10 211 347 2.1E-47 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal MC28_0914 a8e0d9f237207330d32833555fcca8d5 348 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 339 9.2E-111 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MC28_0914 a8e0d9f237207330d32833555fcca8d5 348 SUPERFAMILY SSF160544 237 344 4.19E-33 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal MC28_2867 f17a3169cb624179c56c67193c22a23f 424 SUPERFAMILY SSF52540 196 365 4.59E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2867 f17a3169cb624179c56c67193c22a23f 424 Gene3D G3DSA:3.40.50.300 198 362 3.3E-34 T 14-10-2018 MC28_2867 f17a3169cb624179c56c67193c22a23f 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 199 219 6.4E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_2867 f17a3169cb624179c56c67193c22a23f 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 266 284 6.4E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_2867 f17a3169cb624179c56c67193c22a23f 424 Gene3D G3DSA:3.40.50.11060 17 137 4.3E-41 T 14-10-2018 MC28_2867 f17a3169cb624179c56c67193c22a23f 424 Hamap MF_00900 GTPase HflX [hflX]. 26 384 46.01 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 MC28_2867 f17a3169cb624179c56c67193c22a23f 424 Pfam PF13167 GTP-binding GTPase N-terminal 24 111 9.6E-33 T 14-10-2018 IPR025121 GTPase HflX, N-terminal MC28_2867 f17a3169cb624179c56c67193c22a23f 424 Pfam PF16360 GTP-binding GTPase Middle Region 113 191 1.5E-30 T 14-10-2018 IPR032305 GTP-binding protein, middle domain MC28_2867 f17a3169cb624179c56c67193c22a23f 424 PIRSF PIRSF006809 1 408 1.3E-151 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 MC28_2867 f17a3169cb624179c56c67193c22a23f 424 Pfam PF01926 50S ribosome-binding GTPase 198 317 4.9E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_2867 f17a3169cb624179c56c67193c22a23f 424 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 6 354 2.5E-145 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 MC28_4240 beb0c7797f017599b055eb0bb502c6ca 210 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 105 194 7.8E-30 T 14-10-2018 IPR014197 Sporulation protein YunB MC28_4240 beb0c7797f017599b055eb0bb502c6ca 210 PIRSF PIRSF021383 1 204 2.6E-56 T 14-10-2018 IPR014197 Sporulation protein YunB MC28_4240 beb0c7797f017599b055eb0bb502c6ca 210 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 2 197 2.1E-73 T 14-10-2018 IPR014197 Sporulation protein YunB MC28_3009 725b351045bc1f967bffb2e693f2ec5f 168 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 7 151 2.2E-22 T 14-10-2018 IPR006524 Transcription activator, ArpU family MC28_1054 3d18e4d2c134665b23628d7a9da769f8 431 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 34 397 2.1E-126 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 MC28_1054 3d18e4d2c134665b23628d7a9da769f8 431 PRINTS PR00447 Natural resistance-associated macrophage protein signature 217 240 1.4E-33 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 MC28_1054 3d18e4d2c134665b23628d7a9da769f8 431 PRINTS PR00447 Natural resistance-associated macrophage protein signature 167 188 1.4E-33 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 MC28_1054 3d18e4d2c134665b23628d7a9da769f8 431 PRINTS PR00447 Natural resistance-associated macrophage protein signature 114 140 1.4E-33 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 MC28_1054 3d18e4d2c134665b23628d7a9da769f8 431 PRINTS PR00447 Natural resistance-associated macrophage protein signature 319 338 1.4E-33 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 MC28_1054 3d18e4d2c134665b23628d7a9da769f8 431 PRINTS PR00447 Natural resistance-associated macrophage protein signature 142 161 1.4E-33 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 MC28_1054 3d18e4d2c134665b23628d7a9da769f8 431 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 19 429 38.742 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 MC28_1054 3d18e4d2c134665b23628d7a9da769f8 431 Pfam PF01566 Natural resistance-associated macrophage protein 55 403 6.9E-119 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 MC28_2755 2d8684ad132fd8465935e8645db059b5 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 122 3.2E-30 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 MC28_2755 2d8684ad132fd8465935e8645db059b5 139 SUPERFAMILY SSF54637 2 133 7.0E-37 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_2755 2d8684ad132fd8465935e8645db059b5 139 Pfam PF03061 Thioesterase superfamily 18 102 6.0E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 MC28_2755 2d8684ad132fd8465935e8645db059b5 139 Gene3D G3DSA:3.10.129.10 4 136 1.3E-33 T 14-10-2018 MC28_2755 2d8684ad132fd8465935e8645db059b5 139 PIRSF PIRSF003230 1 135 1.9E-30 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 MC28_G233 fae15752405d4729b22a1ed5f9c55efd 297 SMART SM00530 9 63 2.2E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G233 fae15752405d4729b22a1ed5f9c55efd 297 SUPERFAMILY SSF47413 5 65 1.66E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_G233 fae15752405d4729b22a1ed5f9c55efd 297 Pfam PF12844 Helix-turn-helix domain 9 67 4.8E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G233 fae15752405d4729b22a1ed5f9c55efd 297 Gene3D G3DSA:1.25.40.10 1 297 1.1E-79 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_G233 fae15752405d4729b22a1ed5f9c55efd 297 SUPERFAMILY SSF48452 112 272 6.51E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3324 c153f2852369792a46b374062d4c381a 353 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 36 336 9.4E-122 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 MC28_3324 c153f2852369792a46b374062d4c381a 353 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 347 37.75 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 MC28_3324 c153f2852369792a46b374062d4c381a 353 Gene3D G3DSA:3.40.50.10470 149 352 1.6E-65 T 14-10-2018 MC28_3324 c153f2852369792a46b374062d4c381a 353 Gene3D G3DSA:1.20.120.420 1 148 2.7E-50 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 MC28_3324 c153f2852369792a46b374062d4c381a 353 Pfam PF01008 Initiation factor 2 subunit family 49 335 1.8E-85 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 MC28_3324 c153f2852369792a46b374062d4c381a 353 SUPERFAMILY SSF100950 2 340 3.35E-116 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_3324 c153f2852369792a46b374062d4c381a 353 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 336 1.7E-140 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 MC28_F241 dd435f63cba53d66c6522754ebf1b55b 333 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 27 325 5.3E-122 T 14-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 MC28_F241 dd435f63cba53d66c6522754ebf1b55b 333 SUPERFAMILY SSF53686 11 319 2.36E-99 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_F241 dd435f63cba53d66c6522754ebf1b55b 333 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 311 3.5E-83 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_F241 dd435f63cba53d66c6522754ebf1b55b 333 Gene3D G3DSA:3.40.50.1100 56 152 6.6E-127 T 14-10-2018 MC28_F241 dd435f63cba53d66c6522754ebf1b55b 333 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 MC28_F241 dd435f63cba53d66c6522754ebf1b55b 333 Gene3D G3DSA:3.40.50.1100 13 316 6.6E-127 T 14-10-2018 MC28_1537 9b3ae61761fddef4ab1ccd57db0e1cad 246 Gene3D G3DSA:3.40.630.40 1 168 2.3E-46 T 14-10-2018 MC28_1537 9b3ae61761fddef4ab1ccd57db0e1cad 246 Gene3D G3DSA:3.30.70.2030 169 246 3.1E-23 T 14-10-2018 MC28_1537 9b3ae61761fddef4ab1ccd57db0e1cad 246 Pfam PF12123 N-acetylmuramoyl-l-alanine amidase 203 244 5.0E-22 T 14-10-2018 IPR021976 N-acetylmuramoyl-l-alanine amidase MetaCyc: PWY-7883 MC28_1537 9b3ae61761fddef4ab1ccd57db0e1cad 246 SUPERFAMILY SSF53187 3 168 4.39E-34 T 14-10-2018 MC28_1537 9b3ae61761fddef4ab1ccd57db0e1cad 246 SMART SM00646 65 167 9.4E-19 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 MC28_1537 9b3ae61761fddef4ab1ccd57db0e1cad 246 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 8 162 1.2E-24 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 MC28_4152 39b5f0a98b4e936c8e716db3cd8497f0 182 SUPERFAMILY SSF55729 7 174 1.1E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4152 39b5f0a98b4e936c8e716db3cd8497f0 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 148 1.5E-28 T 14-10-2018 IPR000182 GNAT domain MC28_4152 39b5f0a98b4e936c8e716db3cd8497f0 182 Gene3D G3DSA:3.40.630.30 1 179 2.8E-43 T 14-10-2018 MC28_5288 cb865e7e07d863e66ab69d03613aa66a 188 PIRSF PIRSF016897 1 184 1.8E-69 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 MC28_5288 cb865e7e07d863e66ab69d03613aa66a 188 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 7 178 3.7E-56 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 MC28_5288 cb865e7e07d863e66ab69d03613aa66a 188 Gene3D G3DSA:3.20.20.400 2 185 1.3E-56 T 14-10-2018 IPR035928 GlpP-like superfamily MC28_5288 cb865e7e07d863e66ab69d03613aa66a 188 SUPERFAMILY SSF110391 6 178 5.75E-50 T 14-10-2018 IPR035928 GlpP-like superfamily MC28_4732 052637b75817cebe5944953d1729cc8d 424 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 44.416 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 MC28_4732 052637b75817cebe5944953d1729cc8d 424 Gene3D G3DSA:1.10.287.40 1 105 4.9E-26 T 14-10-2018 MC28_4732 052637b75817cebe5944953d1729cc8d 424 Gene3D G3DSA:3.30.930.10 106 424 1.0E-131 T 14-10-2018 MC28_4732 052637b75817cebe5944953d1729cc8d 424 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 6.1E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 MC28_4732 052637b75817cebe5944953d1729cc8d 424 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 6.1E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 MC28_4732 052637b75817cebe5944953d1729cc8d 424 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 6.1E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 MC28_4732 052637b75817cebe5944953d1729cc8d 424 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 6.1E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 MC28_4732 052637b75817cebe5944953d1729cc8d 424 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 6.1E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 MC28_4732 052637b75817cebe5944953d1729cc8d 424 SUPERFAMILY SSF46589 1 113 4.97E-31 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 MC28_4732 052637b75817cebe5944953d1729cc8d 424 PIRSF PIRSF001529 1 424 4.7E-193 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 MC28_4732 052637b75817cebe5944953d1729cc8d 424 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 400 1.1E-39 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4732 052637b75817cebe5944953d1729cc8d 424 SUPERFAMILY SSF55681 117 423 2.6E-107 T 14-10-2018 MC28_4732 052637b75817cebe5944953d1729cc8d 424 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 5.1E-33 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 MC28_4732 052637b75817cebe5944953d1729cc8d 424 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 4.5E-183 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 MC28_3224 b882da96ccde8becd1914bf3594d97f2 332 Gene3D G3DSA:3.60.110.10 1 305 7.4E-119 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily MC28_3224 b882da96ccde8becd1914bf3594d97f2 332 Pfam PF00795 Carbon-nitrogen hydrolase 16 266 9.5E-36 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 MC28_3224 b882da96ccde8becd1914bf3594d97f2 332 SUPERFAMILY SSF56317 16 274 6.41E-59 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily MC28_3224 b882da96ccde8becd1914bf3594d97f2 332 Hamap MF_01243 Formamidase [amiF]. 1 332 69.808 T 14-10-2018 IPR022843 Formamidase GO:0004328|GO:0006807 KEGG: 00460+3.5.1.49|KEGG: 00630+3.5.1.49|KEGG: 00910+3.5.1.49|MetaCyc: PWY-7142 MC28_3254 99ddeb307401c2d9d3a3fa818fbb8388 130 Pfam PF08968 Domain of unknown function (DUF1885) 2 129 7.3E-56 T 14-10-2018 IPR015062 Protein of unknown function DUF1885 MC28_3254 99ddeb307401c2d9d3a3fa818fbb8388 130 SUPERFAMILY SSF111171 4 128 1.14E-61 T 14-10-2018 IPR036294 Rbstp2229-like superfamily MC28_3254 99ddeb307401c2d9d3a3fa818fbb8388 130 Gene3D G3DSA:1.20.5.850 7 49 1.1E-8 T 14-10-2018 MC28_3254 99ddeb307401c2d9d3a3fa818fbb8388 130 Gene3D G3DSA:3.30.310.120 50 129 4.6E-30 T 14-10-2018 MC28_4041 5ce7a62366214eba8e3fa2addb5b15db 68 TIGRFAM TIGR03898 lanti_MRSA_kill: type 2 lantibiotic, mersacidin/lichenicidin family 6 44 1.5E-6 T 14-10-2018 IPR027635 Type 2 lantibiotic, leader peptide domain GO:0042742 MC28_3561 e45cf67031eda11e4abd074035deb5cb 280 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 34 280 4.8E-126 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 MC28_3561 e45cf67031eda11e4abd074035deb5cb 280 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3561 e45cf67031eda11e4abd074035deb5cb 280 SUPERFAMILY SSF52540 28 267 4.36E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3561 e45cf67031eda11e4abd074035deb5cb 280 Pfam PF00005 ABC transporter 49 205 3.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3561 e45cf67031eda11e4abd074035deb5cb 280 SMART SM00382 58 267 7.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3561 e45cf67031eda11e4abd074035deb5cb 280 Gene3D G3DSA:3.40.50.300 31 276 8.5E-63 T 14-10-2018 MC28_0989 88800528684e46dcecccbef756542330 423 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site MC28_0989 88800528684e46dcecccbef756542330 423 Gene3D G3DSA:1.10.3860.10 1 419 1.9E-135 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_0989 88800528684e46dcecccbef756542330 423 Pfam PF00375 Sodium:dicarboxylate symporter family 6 401 1.1E-125 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 MC28_0989 88800528684e46dcecccbef756542330 423 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 6.2E-38 T 14-10-2018 MC28_0989 88800528684e46dcecccbef756542330 423 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 6.2E-38 T 14-10-2018 MC28_0989 88800528684e46dcecccbef756542330 423 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 6.2E-38 T 14-10-2018 MC28_0989 88800528684e46dcecccbef756542330 423 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 6.2E-38 T 14-10-2018 MC28_0989 88800528684e46dcecccbef756542330 423 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 6.2E-38 T 14-10-2018 MC28_0989 88800528684e46dcecccbef756542330 423 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 6.2E-38 T 14-10-2018 MC28_0989 88800528684e46dcecccbef756542330 423 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 6.2E-38 T 14-10-2018 MC28_0989 88800528684e46dcecccbef756542330 423 PRINTS PR00173 Glutamate-aspartate symporter signature 219 238 6.2E-38 T 14-10-2018 MC28_0989 88800528684e46dcecccbef756542330 423 SUPERFAMILY SSF118215 6 402 1.83E-125 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_0947 902cb1d17069e954f4766e201f8653c2 607 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 533 4.6E-157 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 MC28_0947 902cb1d17069e954f4766e201f8653c2 607 Pfam PF13537 Glutamine amidotransferase domain 48 169 1.7E-47 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain MC28_0947 902cb1d17069e954f4766e201f8653c2 607 Pfam PF00733 Asparagine synthase 243 599 2.1E-90 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 MC28_0947 902cb1d17069e954f4766e201f8653c2 607 SUPERFAMILY SSF56235 1 226 1.2E-66 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_0947 902cb1d17069e954f4766e201f8653c2 607 SUPERFAMILY SSF52402 229 579 2.96E-68 T 14-10-2018 MC28_0947 902cb1d17069e954f4766e201f8653c2 607 Gene3D G3DSA:3.60.20.10 2 184 2.8E-66 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_0947 902cb1d17069e954f4766e201f8653c2 607 PIRSF PIRSF001589 1 606 3.4E-139 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 MC28_3436 a81add958362a675c11ea4d14a135316 233 Gene3D G3DSA:3.30.70.260 139 231 5.7E-15 T 14-10-2018 MC28_3436 a81add958362a675c11ea4d14a135316 233 PRINTS PR01837 MgtC/SapB protein signature 13 32 2.2E-45 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_3436 a81add958362a675c11ea4d14a135316 233 PRINTS PR01837 MgtC/SapB protein signature 32 50 2.2E-45 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_3436 a81add958362a675c11ea4d14a135316 233 PRINTS PR01837 MgtC/SapB protein signature 58 80 2.2E-45 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_3436 a81add958362a675c11ea4d14a135316 233 PRINTS PR01837 MgtC/SapB protein signature 85 109 2.2E-45 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_3436 a81add958362a675c11ea4d14a135316 233 Pfam PF02308 MgtC family 10 129 4.3E-37 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_3583 4d9af32cf04313f5cf45c403fb6e9a58 118 Gene3D G3DSA:1.10.760.10 49 118 2.3E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 MC28_3583 4d9af32cf04313f5cf45c403fb6e9a58 118 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 47 114 2.9E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3583 4d9af32cf04313f5cf45c403fb6e9a58 118 PIRSF PIRSF000025 1 118 4.5E-42 T 14-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 MC28_3583 4d9af32cf04313f5cf45c403fb6e9a58 118 SUPERFAMILY SSF46626 5 116 2.51E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 MC28_3952 1ccb036442927f3967ef41d67c2164c7 132 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 124 23.517 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 MC28_3952 1ccb036442927f3967ef41d67c2164c7 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 2.3E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 MC28_3952 1ccb036442927f3967ef41d67c2164c7 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 2.3E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 MC28_3952 1ccb036442927f3967ef41d67c2164c7 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 2.3E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 MC28_3952 1ccb036442927f3967ef41d67c2164c7 132 SUPERFAMILY SSF81330 10 119 1.02E-34 T 14-10-2018 IPR036019 Gated mechanosensitive channel MC28_3952 1ccb036442927f3967ef41d67c2164c7 132 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site MC28_3952 1ccb036442927f3967ef41d67c2164c7 132 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 123 7.5E-46 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L MC28_3952 1ccb036442927f3967ef41d67c2164c7 132 Gene3D G3DSA:1.10.1200.120 1 126 1.9E-41 T 14-10-2018 IPR036019 Gated mechanosensitive channel MC28_3952 1ccb036442927f3967ef41d67c2164c7 132 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 125 1.9E-49 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 MC28_2801 01f7248f081c6cd9c758ea8c75e32599 206 Gene3D G3DSA:3.40.50.300 18 201 7.3E-14 T 14-10-2018 MC28_2801 01f7248f081c6cd9c758ea8c75e32599 206 SUPERFAMILY SSF52540 15 203 2.75E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2801 01f7248f081c6cd9c758ea8c75e32599 206 Pfam PF13521 AAA domain 19 190 1.2E-14 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain MC28_1200 59c84843ab3d12510738d425fd262da4 159 Gene3D G3DSA:3.90.79.10 5 152 1.2E-40 T 14-10-2018 MC28_1200 59c84843ab3d12510738d425fd262da4 159 SUPERFAMILY SSF55811 11 153 3.25E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_1200 59c84843ab3d12510738d425fd262da4 159 PRINTS PR00502 NUDIX hydrolase family signature 50 64 6.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_1200 59c84843ab3d12510738d425fd262da4 159 PRINTS PR00502 NUDIX hydrolase family signature 64 79 6.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_1200 59c84843ab3d12510738d425fd262da4 159 Pfam PF00293 NUDIX domain 28 147 1.4E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_1200 59c84843ab3d12510738d425fd262da4 159 ProSitePatterns PS00893 Nudix box signature. 55 76 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_4014 cb47be47c0869231caf0182a5171f8b4 359 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 7 358 3.3E-92 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_4014 cb47be47c0869231caf0182a5171f8b4 359 Gene3D G3DSA:3.30.300.210 214 359 5.0E-17 T 14-10-2018 IPR038501 Spore germination GerAC superfamily MC28_4014 cb47be47c0869231caf0182a5171f8b4 359 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 197 356 1.6E-26 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_0832 7df3990c457b24a17fe7ba4c4be1a5ed 372 SUPERFAMILY SSF56059 2 364 5.06E-41 T 14-10-2018 MC28_0832 7df3990c457b24a17fe7ba4c4be1a5ed 372 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 2 366 1.4E-66 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain MC28_0832 7df3990c457b24a17fe7ba4c4be1a5ed 372 Gene3D G3DSA:3.30.1490.330 252 318 5.6E-8 T 14-10-2018 MC28_0832 7df3990c457b24a17fe7ba4c4be1a5ed 372 SUPERFAMILY SSF52440 126 238 7.48E-7 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_0413 0b6e2523f24f3a7cb858e5fb2a0b4742 224 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 9 182 3.2E-70 T 14-10-2018 IPR022301 Integral membrane protein YjbE MC28_0413 0b6e2523f24f3a7cb858e5fb2a0b4742 224 Pfam PF03741 Integral membrane protein TerC family 11 181 1.5E-43 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Pfam PF00668 Condensation domain 1054 1503 3.1E-97 T 14-10-2018 IPR001242 Condensation domain MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Pfam PF00668 Condensation domain 10 444 5.3E-72 T 14-10-2018 IPR001242 Condensation domain MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SMART SM00824 Thioesterase 2135 2293 5.6E-4 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1672 1683 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SUPERFAMILY SSF53474 2113 2376 2.99E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SUPERFAMILY SSF56801 430 985 5.89E-156 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 486 888 9.4E-135 T 14-10-2018 IPR010071 Amino acid adenylation domain MC28_1578 fd26557d7a5386cd481124daf3614101 2385 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1546 1961 1.4E-139 T 14-10-2018 IPR010071 Amino acid adenylation domain MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:3.30.300.30 859 961 7.9E-36 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SUPERFAMILY SSF47336 967 1037 4.45E-19 T 14-10-2018 IPR036736 ACP-like superfamily MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SMART SM00823 Phosphopantetheine attachment site 2045 2114 4.3E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SMART SM00823 Phosphopantetheine attachment site 972 1041 0.0011 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:1.10.1200.10 962 1044 6.4E-25 T 14-10-2018 IPR036736 ACP-like superfamily MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:3.30.300.30 1932 2035 1.6E-38 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SUPERFAMILY SSF47336 2040 2110 6.02E-20 T 14-10-2018 IPR036736 ACP-like superfamily MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Pfam PF00975 Thioesterase domain 2133 2289 7.7E-31 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SUPERFAMILY SSF52777 1058 1230 5.0E-43 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SUPERFAMILY SSF52777 11 184 5.34E-32 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Pfam PF00550 Phosphopantetheine attachment site 2048 2110 1.6E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Pfam PF00550 Phosphopantetheine attachment site 975 1036 8.7E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SUPERFAMILY SSF52777 190 427 3.67E-34 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:3.40.50.12780 452 858 5.3E-134 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:3.40.50.12780 1512 1931 1.4E-147 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:3.30.559.30 1234 1491 2.0E-141 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SUPERFAMILY SSF56801 1484 2058 5.63E-169 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:3.30.559.10 1057 1429 2.0E-141 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Pfam PF13193 AMP-binding enzyme C-terminal domain 1945 2020 4.2E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Pfam PF13193 AMP-binding enzyme C-terminal domain 872 947 1.1E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:3.30.559.10 11 206 5.4E-54 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Pfam PF00501 AMP-binding enzyme 465 864 4.5E-107 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Pfam PF00501 AMP-binding enzyme 1525 1937 5.8E-108 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 SUPERFAMILY SSF52777 1244 1497 3.0E-58 T 14-10-2018 MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:3.40.50.1820 2036 2378 3.6E-113 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1578 fd26557d7a5386cd481124daf3614101 2385 Gene3D G3DSA:3.30.559.30 207 433 8.1E-61 T 14-10-2018 MC28_F130 ae66ebbc3762e05b436ff714dc4e628b 87 Pfam PF13610 DDE domain 16 58 2.9E-6 T 14-10-2018 IPR032874 DDE domain MC28_4526 58b60d7186e1b007db054e329859d705 78 Pfam PF06612 Protein of unknown function (DUF1146) 17 64 3.5E-20 T 14-10-2018 IPR009526 Protein of unknown function DUF1146 MC28_4526 58b60d7186e1b007db054e329859d705 78 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 10 76 3.9E-31 T 14-10-2018 IPR009526 Protein of unknown function DUF1146 MC28_4404 f8cfedc3016e04d6c1f8ffbb7f94326a 253 Pfam PF13411 MerR HTH family regulatory protein 5 70 1.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4404 f8cfedc3016e04d6c1f8ffbb7f94326a 253 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 1.3E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4404 f8cfedc3016e04d6c1f8ffbb7f94326a 253 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.3E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4404 f8cfedc3016e04d6c1f8ffbb7f94326a 253 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 1.3E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4404 f8cfedc3016e04d6c1f8ffbb7f94326a 253 SUPERFAMILY SSF46955 5 113 5.86E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_4404 f8cfedc3016e04d6c1f8ffbb7f94326a 253 SMART SM00422 4 73 1.2E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4404 f8cfedc3016e04d6c1f8ffbb7f94326a 253 Gene3D G3DSA:1.10.1660.10 2 148 6.8E-32 T 14-10-2018 MC28_5204 94c32055e684c9bb360f50bd208a0125 269 Pfam PF05709 Phage tail protein 20 269 1.8E-37 T 14-10-2018 IPR008841 Siphovirus-type tail component MC28_5204 94c32055e684c9bb360f50bd208a0125 269 Gene3D G3DSA:2.40.30.200 6 133 4.8E-9 T 14-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily MC28_5204 94c32055e684c9bb360f50bd208a0125 269 TIGRFAM TIGR01633 phi3626_gp14_N: putative phage tail component, N-terminal domain 6 133 2.1E-7 T 14-10-2018 IPR006520 Streptococcus phage 7201, Orf34, N-terminal MC28_5119 8a2163e1e00d39bded06ae0c7500732c 97 Pfam PF14150 YesK-like protein 10 90 8.3E-31 T 14-10-2018 IPR025434 YesK-like protein MC28_0219 6897d0be39611c1dd30040e6456db55d 583 Pfam PF02734 DAK2 domain 398 578 1.5E-51 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_0219 6897d0be39611c1dd30040e6456db55d 583 Gene3D G3DSA:3.30.1180.20 183 328 1.1E-51 T 14-10-2018 MC28_0219 6897d0be39611c1dd30040e6456db55d 583 Gene3D G3DSA:1.25.40.340 366 582 3.8E-55 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_0219 6897d0be39611c1dd30040e6456db55d 583 SUPERFAMILY SSF82549 1 329 1.23E-121 T 14-10-2018 MC28_0219 6897d0be39611c1dd30040e6456db55d 583 SMART SM01120 397 580 3.1E-57 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_0219 6897d0be39611c1dd30040e6456db55d 583 SUPERFAMILY SSF101473 356 580 6.8E-45 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_0219 6897d0be39611c1dd30040e6456db55d 583 Pfam PF02733 Dak1 domain 18 326 2.7E-126 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 MC28_0219 6897d0be39611c1dd30040e6456db55d 583 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 327 5.5E-136 T 14-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 MC28_0219 6897d0be39611c1dd30040e6456db55d 583 Gene3D G3DSA:3.40.50.10440 13 182 1.6E-64 T 14-10-2018 MC28_0219 6897d0be39611c1dd30040e6456db55d 583 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 376 579 5.5E-41 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 MC28_5256 59b069eac411fba7b6df6f362b635cc8 337 Pfam PF00005 ABC transporter 42 185 2.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5256 59b069eac411fba7b6df6f362b635cc8 337 SUPERFAMILY SSF52540 35 253 4.17E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5256 59b069eac411fba7b6df6f362b635cc8 337 Gene3D G3DSA:3.40.50.300 26 277 3.8E-60 T 14-10-2018 MC28_5256 59b069eac411fba7b6df6f362b635cc8 337 SMART SM00382 50 234 7.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4172 866b1337d34a8abe53429cfe090a892a 279 Pfam PF00561 alpha/beta hydrolase fold 33 265 9.7E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_4172 866b1337d34a8abe53429cfe090a892a 279 PRINTS PR00412 Epoxide hydrolase signature 254 276 1.4E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 MC28_4172 866b1337d34a8abe53429cfe090a892a 279 PRINTS PR00412 Epoxide hydrolase signature 39 57 1.4E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 MC28_4172 866b1337d34a8abe53429cfe090a892a 279 PRINTS PR00412 Epoxide hydrolase signature 103 116 1.4E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 MC28_4172 866b1337d34a8abe53429cfe090a892a 279 PRINTS PR00412 Epoxide hydrolase signature 221 237 1.4E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 MC28_4172 866b1337d34a8abe53429cfe090a892a 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 7.5E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_4172 866b1337d34a8abe53429cfe090a892a 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 223 237 7.5E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_4172 866b1337d34a8abe53429cfe090a892a 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 7.5E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_4172 866b1337d34a8abe53429cfe090a892a 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 7.5E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_4172 866b1337d34a8abe53429cfe090a892a 279 Gene3D G3DSA:3.40.50.1820 3 279 6.9E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4172 866b1337d34a8abe53429cfe090a892a 279 SUPERFAMILY SSF53474 6 276 5.4E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_G252 9a613134d997afbac74a7c1d35d249d9 507 Gene3D G3DSA:3.30.420.40 244 506 7.4E-88 T 14-10-2018 MC28_G252 9a613134d997afbac74a7c1d35d249d9 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 242 1.9E-80 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 MC28_G252 9a613134d997afbac74a7c1d35d249d9 507 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 1 503 1.1E-279 T 14-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 MC28_G252 9a613134d997afbac74a7c1d35d249d9 507 PIRSF PIRSF000538 1 499 5.5E-134 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 MC28_G252 9a613134d997afbac74a7c1d35d249d9 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 447 3.0E-36 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 MC28_G252 9a613134d997afbac74a7c1d35d249d9 507 Gene3D G3DSA:3.30.420.40 1 243 9.4E-76 T 14-10-2018 MC28_G252 9a613134d997afbac74a7c1d35d249d9 507 SUPERFAMILY SSF53067 1 244 2.79E-62 T 14-10-2018 MC28_G252 9a613134d997afbac74a7c1d35d249d9 507 SUPERFAMILY SSF53067 245 493 3.53E-64 T 14-10-2018 MC28_G252 9a613134d997afbac74a7c1d35d249d9 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 MC28_4948 2ce8591e2492e553e0860846ae4dfc3a 140 Pfam PF00583 Acetyltransferase (GNAT) family 8 116 2.2E-19 T 14-10-2018 IPR000182 GNAT domain MC28_4948 2ce8591e2492e553e0860846ae4dfc3a 140 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 6 136 1.2E-45 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 MC28_4948 2ce8591e2492e553e0860846ae4dfc3a 140 SUPERFAMILY SSF55729 2 138 2.16E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4948 2ce8591e2492e553e0860846ae4dfc3a 140 Gene3D G3DSA:3.40.630.30 1 140 2.0E-43 T 14-10-2018 MC28_2168 2a1321ff5e1d63e120218d92cc62c315 167 Pfam PF13302 Acetyltransferase (GNAT) domain 19 148 2.4E-17 T 14-10-2018 IPR000182 GNAT domain MC28_2168 2a1321ff5e1d63e120218d92cc62c315 167 SUPERFAMILY SSF55729 8 149 1.93E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2168 2a1321ff5e1d63e120218d92cc62c315 167 Gene3D G3DSA:3.40.630.30 2 165 3.0E-29 T 14-10-2018 MC28_4752 5acdf31ff9e6bcdd39bafe3f6143e986 94 SMART SM00966 8 51 6.6E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_4752 5acdf31ff9e6bcdd39bafe3f6143e986 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 4.6E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_4752 5acdf31ff9e6bcdd39bafe3f6143e986 94 SUPERFAMILY SSF89447 1 52 1.23E-16 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily MC28_4752 5acdf31ff9e6bcdd39bafe3f6143e986 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 8.8E-12 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_4752 5acdf31ff9e6bcdd39bafe3f6143e986 94 Gene3D G3DSA:2.10.260.10 1 51 1.4E-26 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 Gene3D G3DSA:3.40.1110.10 334 537 0.0 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 SUPERFAMILY SSF56784 322 736 1.2E-64 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 SUPERFAMILY SSF81665 1 881 1.44E-135 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 SMART SM00831 2 76 2.6E-25 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 632 648 4.5E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 664 689 4.5E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 620 4.5E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 488 506 4.5E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 Pfam PF00690 Cation transporter/ATPase, N-terminus 3 71 1.4E-16 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 Gene3D G3DSA:1.20.1110.10 54 877 0.0 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 Pfam PF00122 E1-E2 ATPase 111 304 3.5E-55 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 SUPERFAMILY SSF81653 114 224 1.96E-31 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 SUPERFAMILY SSF81660 332 534 1.24E-57 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 53 881 1.8E-215 T 14-10-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 541 9.5E-41 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 9.5E-41 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 9.5E-41 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 9.5E-41 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 9.5E-41 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 562 9.5E-41 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 Gene3D G3DSA:3.40.50.1000 321 677 0.0 T 14-10-2018 IPR023214 HAD superfamily MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 Pfam PF00689 Cation transporting ATPase, C-terminus 716 881 3.7E-51 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 646 3.7E-28 T 14-10-2018 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 180 5.3E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 214 345 2.6E-28 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 599 722 5.4E-38 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 MC28_3097 2bd8997fde604464600e5f3ccf494a69 907 Gene3D G3DSA:2.70.150.10 16 227 0.0 T 14-10-2018 MC28_C057 030711b4b1defbb64f2373ff6858d6e2 96 Pfam PF01022 Bacterial regulatory protein, arsR family 24 64 1.9E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_C057 030711b4b1defbb64f2373ff6858d6e2 96 SMART SM00418 17 96 1.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_C057 030711b4b1defbb64f2373ff6858d6e2 96 Gene3D G3DSA:1.10.10.10 2 95 1.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_C057 030711b4b1defbb64f2373ff6858d6e2 96 SUPERFAMILY SSF46785 5 95 1.59E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_C057 030711b4b1defbb64f2373ff6858d6e2 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 9.8E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_C057 030711b4b1defbb64f2373ff6858d6e2 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 9.8E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_C057 030711b4b1defbb64f2373ff6858d6e2 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 9.8E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2759 1c56d5117018a6bb21d93a7b5363c8f9 318 SMART SM00479 12 177 4.7E-49 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III MC28_2759 1c56d5117018a6bb21d93a7b5363c8f9 318 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 13 199 4.3E-31 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MC28_2759 1c56d5117018a6bb21d93a7b5363c8f9 318 Pfam PF00929 Exonuclease 14 168 4.9E-35 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III MC28_2759 1c56d5117018a6bb21d93a7b5363c8f9 318 Gene3D G3DSA:3.30.420.10 11 181 3.1E-53 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_2759 1c56d5117018a6bb21d93a7b5363c8f9 318 SUPERFAMILY SSF53098 10 209 1.58E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_3919 e528e6132f0391295744cb4a9c368600 176 Pfam PF11167 Protein of unknown function (DUF2953) 85 137 1.1E-19 T 14-10-2018 IPR021338 Protein of unknown function DUF2953 MC28_1025 3bdc51053f075cabd3fff376726e1879 228 Gene3D G3DSA:3.30.240.20 170 228 4.4E-19 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_1025 3bdc51053f075cabd3fff376726e1879 228 Gene3D G3DSA:3.30.240.20 79 156 4.0E-25 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_1025 3bdc51053f075cabd3fff376726e1879 228 Pfam PF04239 Protein of unknown function (DUF421) 89 205 1.8E-31 T 14-10-2018 IPR007353 Protein of unknown function DUF421 MC28_2703 9e14c0a848099e28036aaff2720d2470 494 Gene3D G3DSA:3.40.309.10 270 459 1.5E-201 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_2703 9e14c0a848099e28036aaff2720d2470 494 SUPERFAMILY SSF53720 15 492 5.37E-182 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_2703 9e14c0a848099e28036aaff2720d2470 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 MC28_2703 9e14c0a848099e28036aaff2720d2470 494 Pfam PF00171 Aldehyde dehydrogenase family 28 489 4.6E-191 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_2703 9e14c0a848099e28036aaff2720d2470 494 Gene3D G3DSA:3.40.605.10 24 487 1.5E-201 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_4672 be516c4fb199a4d6f9dc2c41348651a9 230 Hamap MF_01142 Antiholin-like protein LrgB [lrgB]. 1 230 35.043 T 14-10-2018 IPR024891 Antiholin-like protein LrgB MC28_4672 be516c4fb199a4d6f9dc2c41348651a9 230 Pfam PF04172 LrgB-like family 14 227 5.1E-69 T 14-10-2018 IPR007300 CidB/LrgB family MC28_2441 b0c9acbf9009cc681f084c915a8ef22e 169 Pfam PF02525 Flavodoxin-like fold 3 162 4.3E-34 T 14-10-2018 IPR003680 Flavodoxin-like fold MC28_2441 b0c9acbf9009cc681f084c915a8ef22e 169 Gene3D G3DSA:3.40.50.360 1 169 1.6E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_2441 b0c9acbf9009cc681f084c915a8ef22e 169 SUPERFAMILY SSF52218 2 169 4.5E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0029 7bdcabd07018c799c8bc92fdd6ee799e 370 Gene3D G3DSA:3.40.50.2300 59 324 2.1E-89 T 14-10-2018 MC28_0029 7bdcabd07018c799c8bc92fdd6ee799e 370 Pfam PF13407 Periplasmic binding protein domain 63 316 3.6E-42 T 14-10-2018 IPR025997 Periplasmic binding protein MC28_0029 7bdcabd07018c799c8bc92fdd6ee799e 370 Gene3D G3DSA:3.40.50.2300 158 331 2.1E-89 T 14-10-2018 MC28_0029 7bdcabd07018c799c8bc92fdd6ee799e 370 SUPERFAMILY SSF53822 55 334 2.51E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_4242 9b06ef3325c953c2bdc401f9ed6dba24 424 SUPERFAMILY SSF55816 239 417 2.35E-25 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_4242 9b06ef3325c953c2bdc401f9ed6dba24 424 Gene3D G3DSA:3.60.21.10 1 232 4.9E-38 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_4242 9b06ef3325c953c2bdc401f9ed6dba24 424 Gene3D G3DSA:3.90.780.10 238 423 3.0E-13 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_4242 9b06ef3325c953c2bdc401f9ed6dba24 424 PIRSF PIRSF036361 1 420 4.4E-144 T 14-10-2018 IPR011240 Phosphoesterase-related protein YunD MC28_4242 9b06ef3325c953c2bdc401f9ed6dba24 424 SUPERFAMILY SSF56300 1 208 2.53E-44 T 14-10-2018 MC28_4242 9b06ef3325c953c2bdc401f9ed6dba24 424 Pfam PF02872 5'-nucleotidase, C-terminal domain 245 382 6.8E-13 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_2261 8e202c6a15dedf15dd5e5eab97bf9a7d 723 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 317 2.5E-38 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_2261 8e202c6a15dedf15dd5e5eab97bf9a7d 723 Gene3D G3DSA:3.40.710.10 332 693 3.1E-222 T 14-10-2018 MC28_2261 8e202c6a15dedf15dd5e5eab97bf9a7d 723 Gene3D G3DSA:1.10.10.1230 99 208 3.1E-222 T 14-10-2018 MC28_2261 8e202c6a15dedf15dd5e5eab97bf9a7d 723 SUPERFAMILY SSF56601 334 705 3.62E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_2261 8e202c6a15dedf15dd5e5eab97bf9a7d 723 Pfam PF00905 Penicillin binding protein transpeptidase domain 363 699 6.5E-69 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_2261 8e202c6a15dedf15dd5e5eab97bf9a7d 723 Gene3D G3DSA:3.90.1310.30 74 586 3.1E-222 T 14-10-2018 MC28_2261 8e202c6a15dedf15dd5e5eab97bf9a7d 723 SUPERFAMILY SSF56519 68 332 1.96E-38 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_F097 3d4ffec626f2cd223452dff95cf9d026 90 SUPERFAMILY SSF47729 1 90 5.45E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_F097 3d4ffec626f2cd223452dff95cf9d026 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.5E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_F097 3d4ffec626f2cd223452dff95cf9d026 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.5E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_F097 3d4ffec626f2cd223452dff95cf9d026 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.5E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_F097 3d4ffec626f2cd223452dff95cf9d026 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MC28_F097 3d4ffec626f2cd223452dff95cf9d026 90 Gene3D G3DSA:4.10.520.10 1 90 2.8E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 MC28_F097 3d4ffec626f2cd223452dff95cf9d026 90 SMART SM00411 1 90 5.8E-46 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_F097 3d4ffec626f2cd223452dff95cf9d026 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.5E-36 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 MC28_0935 5cfe4901549dc9f030d6e0d53988f682 258 Gene3D G3DSA:2.40.320.10 13 135 2.0E-6 T 14-10-2018 MC28_2687 02dbff24252dccd04ac3368003601cee 273 SUPERFAMILY SSF53098 17 180 5.06E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_2687 02dbff24252dccd04ac3368003601cee 273 SMART SM00479 1 175 1.5E-15 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III MC28_2687 02dbff24252dccd04ac3368003601cee 273 Gene3D G3DSA:3.30.420.10 1 215 2.8E-42 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_2687 02dbff24252dccd04ac3368003601cee 273 Pfam PF00929 Exonuclease 16 166 3.0E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III MC28_1734 40b9ff807fa8ba1ac4a168b8dd13f832 513 Gene3D G3DSA:3.90.226.10 2 248 2.7E-77 T 14-10-2018 MC28_1734 40b9ff807fa8ba1ac4a168b8dd13f832 513 SUPERFAMILY SSF52096 8 253 8.68E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_1734 40b9ff807fa8ba1ac4a168b8dd13f832 513 SUPERFAMILY SSF52096 215 490 1.57E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_1734 40b9ff807fa8ba1ac4a168b8dd13f832 513 Pfam PF01039 Carboxyl transferase domain 30 510 2.9E-159 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 MC28_1734 40b9ff807fa8ba1ac4a168b8dd13f832 513 Gene3D G3DSA:3.90.226.10 249 512 7.9E-84 T 14-10-2018 MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 Gene3D G3DSA:3.20.20.100 3 277 4.2E-124 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 231 246 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 Pfam PF00248 Aldo/keto reductase family 30 263 3.3E-52 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 SUPERFAMILY SSF51430 9 272 3.14E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 PRINTS PR00069 Aldo-keto reductase signature 127 144 1.3E-51 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 PRINTS PR00069 Aldo-keto reductase signature 97 115 1.3E-51 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 PRINTS PR00069 Aldo-keto reductase signature 198 222 1.3E-51 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 PRINTS PR00069 Aldo-keto reductase signature 41 65 1.3E-51 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 PRINTS PR00069 Aldo-keto reductase signature 161 190 1.3E-51 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 45 62 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 PIRSF PIRSF000097 3 274 1.8E-91 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4896 0c71c234e798461f0acb7b05d5b22795 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 127 144 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_2876 514fd08f25f532e1341c6d422a009697 74 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 31.451 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MC28_2876 514fd08f25f532e1341c6d422a009697 74 Gene3D G3DSA:2.30.30.100 1 74 6.8E-35 T 14-10-2018 MC28_2876 514fd08f25f532e1341c6d422a009697 74 Pfam PF17209 Hfq protein 7 69 5.4E-33 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MC28_2876 514fd08f25f532e1341c6d422a009697 74 SUPERFAMILY SSF50182 6 65 2.25E-24 T 14-10-2018 IPR010920 LSM domain superfamily MC28_2876 514fd08f25f532e1341c6d422a009697 74 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 2.7E-32 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MC28_2606 2a48f5f1eff8039973c69a2e4fac17c4 388 Gene3D G3DSA:1.20.1720.10 1 377 6.8E-88 T 14-10-2018 MC28_2606 2a48f5f1eff8039973c69a2e4fac17c4 388 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 374 3.0E-68 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 MC28_2606 2a48f5f1eff8039973c69a2e4fac17c4 388 SUPERFAMILY SSF103473 4 377 6.41E-56 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2606 2a48f5f1eff8039973c69a2e4fac17c4 388 ProSitePatterns PS00216 Sugar transport proteins signature 1. 51 67 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_2606 2a48f5f1eff8039973c69a2e4fac17c4 388 Pfam PF07690 Major Facilitator Superfamily 9 340 6.6E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 2 418 8.4E-173 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 Pfam PF00364 Biotin-requiring enzyme 3 75 5.1E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 187 417 3.2E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 SUPERFAMILY SSF52777 188 417 6.67E-87 T 14-10-2018 MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 SUPERFAMILY SSF51230 1 93 1.18E-24 T 14-10-2018 IPR011053 Single hybrid motif MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 Gene3D G3DSA:4.10.320.10 125 163 5.2E-15 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 Pfam PF02817 e3 binding domain 125 159 5.0E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 Gene3D G3DSA:3.30.559.10 187 418 1.1E-91 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 SUPERFAMILY SSF47005 119 162 9.02E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 MC28_0483 b0d9302aeed4228cfcb4eb2a80d3b8db 419 Gene3D G3DSA:2.40.50.100 1 105 1.1E-25 T 14-10-2018 MC28_2100 1497a6b8d320f5a54506c467529487f4 46 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 45 7.9E-18 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_2100 1497a6b8d320f5a54506c467529487f4 46 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 46 9.4E-22 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_3380 50f277e925d23d916b0788dca0ead5ca 383 Pfam PF01676 Metalloenzyme superfamily 1 369 3.9E-40 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 MC28_3380 50f277e925d23d916b0788dca0ead5ca 383 Hamap MF_00740 Phosphopentomutase [deoB]. 1 378 54.732 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 MC28_3380 50f277e925d23d916b0788dca0ead5ca 383 PIRSF PIRSF001491 1 382 4.0E-165 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 MC28_3380 50f277e925d23d916b0788dca0ead5ca 383 SUPERFAMILY SSF53649 1 381 2.09E-75 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_3380 50f277e925d23d916b0788dca0ead5ca 383 Gene3D G3DSA:3.30.70.1250 88 206 5.5E-176 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 MC28_3380 50f277e925d23d916b0788dca0ead5ca 383 SUPERFAMILY SSF143856 90 206 1.57E-52 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 MC28_3380 50f277e925d23d916b0788dca0ead5ca 383 Gene3D G3DSA:3.40.720.10 1 378 5.5E-176 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_3380 50f277e925d23d916b0788dca0ead5ca 383 TIGRFAM TIGR01696 deoB: phosphopentomutase 1 376 9.7E-203 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 MC28_1715 ee075a709ad2b53bd6a3a71586b1edf4 601 Gene3D G3DSA:2.60.120.1250 42 169 1.1E-47 T 14-10-2018 MC28_1715 ee075a709ad2b53bd6a3a71586b1edf4 601 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 165 427 5.1E-56 T 14-10-2018 IPR031161 Peptidase family M60 domain MC28_1715 ee075a709ad2b53bd6a3a71586b1edf4 601 Pfam PF17291 N-terminal domain of M60-like peptidases 79 153 7.5E-14 T 14-10-2018 IPR035423 M60-like domain, N-terminal MC28_1715 ee075a709ad2b53bd6a3a71586b1edf4 601 SMART SM01276 82 377 4.0E-103 T 14-10-2018 IPR031161 Peptidase family M60 domain MC28_1715 ee075a709ad2b53bd6a3a71586b1edf4 601 Gene3D G3DSA:1.10.1740.210 170 301 5.7E-42 T 14-10-2018 MC28_1715 ee075a709ad2b53bd6a3a71586b1edf4 601 Pfam PF03272 Putative mucin or carbohydrate-binding module 479 597 1.0E-25 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_1715 ee075a709ad2b53bd6a3a71586b1edf4 601 Gene3D G3DSA:1.10.390.30 303 464 1.7E-55 T 14-10-2018 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 Gene3D G3DSA:3.30.1490.100 275 389 2.1E-23 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 Hamap MF_01113 DNA polymerase IV [dinB]. 36 388 37.066 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 Gene3D G3DSA:2.30.40.20 56 109 2.3E-59 T 14-10-2018 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 SUPERFAMILY SSF100879 276 376 7.38E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 Pfam PF00817 impB/mucB/samB family 42 189 3.9E-49 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 SUPERFAMILY SSF56672 28 269 2.76E-80 T 14-10-2018 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 Pfam PF11799 impB/mucB/samB family C-terminal domain 276 378 2.8E-17 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 Pfam PF11798 IMS family HHH motif 203 232 4.7E-8 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 Gene3D G3DSA:3.30.70.270 39 199 2.3E-59 T 14-10-2018 MC28_3437 1d06217a7e180c3bf9b99cac8379301f 439 Gene3D G3DSA:1.10.150.20 204 271 1.4E-15 T 14-10-2018 MC28_0973 3e73085985ceda272ad9cc8e8743e3dc 184 Gene3D G3DSA:3.40.30.10 17 184 5.5E-44 T 14-10-2018 MC28_0973 3e73085985ceda272ad9cc8e8743e3dc 184 SUPERFAMILY SSF52833 44 183 6.53E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_0973 3e73085985ceda272ad9cc8e8743e3dc 184 ProSitePatterns PS00194 Thioredoxin family active site. 74 92 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 MC28_0973 3e73085985ceda272ad9cc8e8743e3dc 184 Pfam PF00578 AhpC/TSA family 46 162 1.0E-25 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 MC28_3096 c65f4b4f50a4a2b9e6e84865f905c3ca 291 Pfam PF03755 YicC-like family, N-terminal region 2 156 4.5E-42 T 14-10-2018 IPR013527 YicC-like, N-terminal MC28_3096 c65f4b4f50a4a2b9e6e84865f905c3ca 291 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 291 5.5E-89 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 MC28_3096 c65f4b4f50a4a2b9e6e84865f905c3ca 291 Pfam PF08340 Domain of unknown function (DUF1732) 207 291 7.0E-38 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 MC28_1649 c3948677bdc693784f39c467c830b3d1 198 Gene3D G3DSA:2.60.120.200 8 198 5.1E-48 T 14-10-2018 MC28_1649 c3948677bdc693784f39c467c830b3d1 198 Pfam PF07081 Protein of unknown function (DUF1349) 16 197 2.4E-54 T 14-10-2018 IPR009784 Protein of unknown function DUF1349 MC28_1649 c3948677bdc693784f39c467c830b3d1 198 PIRSF PIRSF022704 2 198 7.0E-68 T 14-10-2018 IPR015987 Uncharacterised conserved protein UCP022704 MC28_1649 c3948677bdc693784f39c467c830b3d1 198 SUPERFAMILY SSF49899 33 197 4.75E-29 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily MC28_1264 6843c58aa28664ff35af1313372731de 377 Gene3D G3DSA:3.30.870.10 20 202 2.0E-40 T 14-10-2018 MC28_1264 6843c58aa28664ff35af1313372731de 377 SMART SM00155 121 148 0.042 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_1264 6843c58aa28664ff35af1313372731de 377 SMART SM00155 290 317 1.4E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 MC28_1264 6843c58aa28664ff35af1313372731de 377 SUPERFAMILY SSF56024 24 194 1.1E-40 T 14-10-2018 MC28_1264 6843c58aa28664ff35af1313372731de 377 Pfam PF13091 PLD-like domain 39 181 5.6E-13 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_1264 6843c58aa28664ff35af1313372731de 377 Pfam PF13091 PLD-like domain 220 343 1.5E-27 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 MC28_1264 6843c58aa28664ff35af1313372731de 377 SUPERFAMILY SSF56024 207 358 7.4E-38 T 14-10-2018 MC28_1264 6843c58aa28664ff35af1313372731de 377 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 14 374 8.6E-96 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 MC28_1264 6843c58aa28664ff35af1313372731de 377 PIRSF PIRSF000850 12 92 0.06 T 14-10-2018 MC28_1264 6843c58aa28664ff35af1313372731de 377 PIRSF PIRSF000850 205 276 2.3E-4 T 14-10-2018 MC28_1264 6843c58aa28664ff35af1313372731de 377 PIRSF PIRSF000850 275 353 3.6 T 14-10-2018 MC28_1264 6843c58aa28664ff35af1313372731de 377 Gene3D G3DSA:3.30.870.10 203 353 2.4E-26 T 14-10-2018 MC28_1864 493c6cb259436bbdc1318e2795613b36 431 SUPERFAMILY SSF103473 18 411 1.03E-34 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1864 493c6cb259436bbdc1318e2795613b36 431 Gene3D G3DSA:1.20.1250.20 11 413 9.5E-31 T 14-10-2018 MC28_1864 493c6cb259436bbdc1318e2795613b36 431 Pfam PF07690 Major Facilitator Superfamily 25 377 5.6E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1864 493c6cb259436bbdc1318e2795613b36 431 PRINTS PR01988 Putative bacilysin exporter bacE signature 59 77 7.8E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_1864 493c6cb259436bbdc1318e2795613b36 431 PRINTS PR01988 Putative bacilysin exporter bacE signature 151 172 7.8E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_1864 493c6cb259436bbdc1318e2795613b36 431 PRINTS PR01988 Putative bacilysin exporter bacE signature 178 195 7.8E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_1864 493c6cb259436bbdc1318e2795613b36 431 PRINTS PR01988 Putative bacilysin exporter bacE signature 370 393 7.8E-5 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_0534 a89acf7fb5534c29d067a09360e09dbf 236 Gene3D G3DSA:3.40.50.10420 45 236 1.3E-36 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily MC28_0534 a89acf7fb5534c29d067a09360e09dbf 236 SUPERFAMILY SSF100950 45 236 8.79E-39 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_0534 a89acf7fb5534c29d067a09360e09dbf 236 Hamap MF_02104 Lactate utilization protein C [lutC]. 4 236 48.846 T 14-10-2018 IPR022823 Lactate utilization protein C MC28_0534 a89acf7fb5534c29d067a09360e09dbf 236 Pfam PF02589 LUD domain 51 236 9.5E-34 T 14-10-2018 IPR003741 LUD domain MC28_2942 27134b6475093b71974bf2392950b905 265 Gene3D G3DSA:3.40.50.970 45 217 8.2E-30 T 14-10-2018 MC28_2942 27134b6475093b71974bf2392950b905 265 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 176 241 1.2E-22 T 14-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal MC28_2942 27134b6475093b71974bf2392950b905 265 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 2 251 2.5E-88 T 14-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate MC28_2942 27134b6475093b71974bf2392950b905 265 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 25 172 1.2E-32 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 MC28_2942 27134b6475093b71974bf2392950b905 265 SUPERFAMILY SSF52518 3 263 3.16E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_5311 f44e937621265e67e7159a43d42eebff 168 Pfam PF13420 Acetyltransferase (GNAT) domain 3 159 3.6E-19 T 14-10-2018 MC28_5311 f44e937621265e67e7159a43d42eebff 168 SUPERFAMILY SSF55729 1 167 5.57E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_5311 f44e937621265e67e7159a43d42eebff 168 Gene3D G3DSA:3.40.630.30 1 167 2.1E-42 T 14-10-2018 MC28_4234 5e44a0ec75b398b8b2159523f79bb454 271 Pfam PF10086 Putative membrane peptidase family (DUF2324) 31 247 1.0E-76 T 14-10-2018 IPR011397 Uncharacterised conserved protein UCP033101 MC28_4234 5e44a0ec75b398b8b2159523f79bb454 271 PIRSF PIRSF033101 15 271 3.9E-102 T 14-10-2018 IPR011397 Uncharacterised conserved protein UCP033101 MC28_2122 85077baa8e8f09247e0b14b1af913187 181 Gene3D G3DSA:3.40.630.30 1 177 6.0E-39 T 14-10-2018 MC28_2122 85077baa8e8f09247e0b14b1af913187 181 Pfam PF13302 Acetyltransferase (GNAT) domain 7 145 5.1E-24 T 14-10-2018 IPR000182 GNAT domain MC28_2122 85077baa8e8f09247e0b14b1af913187 181 SUPERFAMILY SSF55729 6 171 1.93E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3497 02875726d6b7c63341456aea56eb001c 163 Gene3D G3DSA:1.10.10.10 22 94 3.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3497 02875726d6b7c63341456aea56eb001c 163 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 24 81 9.3E-25 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 MC28_3497 02875726d6b7c63341456aea56eb001c 163 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 84 144 1.4E-17 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 MC28_3497 02875726d6b7c63341456aea56eb001c 163 SUPERFAMILY SSF46785 24 83 5.66E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3497 02875726d6b7c63341456aea56eb001c 163 SMART SM00529 45 144 1.7E-43 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 MC28_3497 02875726d6b7c63341456aea56eb001c 163 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 22 160 47.707 T 14-10-2018 IPR022897 HTH-type transcription regulator MntR MC28_3497 02875726d6b7c63341456aea56eb001c 163 SUPERFAMILY SSF47979 84 151 1.57E-18 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 MC28_3497 02875726d6b7c63341456aea56eb001c 163 Gene3D G3DSA:1.10.60.10 95 163 1.7E-31 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 SUPERFAMILY SSF81891 143 397 9.29E-52 T 14-10-2018 MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 Gene3D G3DSA:1.10.110.30 147 242 3.4E-28 T 14-10-2018 MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 Gene3D G3DSA:1.20.58.560 243 341 1.5E-19 T 14-10-2018 MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 Gene3D G3DSA:1.10.246.80 342 399 3.6E-24 T 14-10-2018 MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 Gene3D G3DSA:3.30.460.10 4 146 8.0E-51 T 14-10-2018 MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 Hamap MF_01263 CCA-adding enzyme [cca]. 4 398 42.225 T 14-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 247 393 3.9E-44 T 14-10-2018 IPR032810 CCA-adding enzyme, C-terminal MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 229 1.2E-16 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 SUPERFAMILY SSF81301 7 141 1.31E-40 T 14-10-2018 MC28_0770 594f7934d24ed8cf7a412ffeec549d60 400 Pfam PF01743 Poly A polymerase head domain 24 143 2.0E-33 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 MC28_3442 da0218019387380c14fe03caf0efe46a 322 Gene3D G3DSA:1.20.120.940 140 313 8.0E-53 T 14-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily MC28_3442 da0218019387380c14fe03caf0efe46a 322 Pfam PF06081 Aromatic acid exporter family member 1 2 142 2.1E-51 T 14-10-2018 IPR010343 Aromatic acid exporter family member 1 MC28_3442 da0218019387380c14fe03caf0efe46a 322 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 146 310 3.1E-53 T 14-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal MC28_2191 b119f14acd30c2b48262d030ded5c998 71 SMART SM00530 6 62 1.0E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_2191 b119f14acd30c2b48262d030ded5c998 71 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 2.3E-24 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_2191 b119f14acd30c2b48262d030ded5c998 71 SUPERFAMILY SSF47413 1 68 5.07E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2191 b119f14acd30c2b48262d030ded5c998 71 Gene3D G3DSA:1.10.260.40 1 71 4.0E-10 T 14-10-2018 MC28_4456 e2d7276e2fce34e92f7a7c7e1afe4727 364 Gene3D G3DSA:1.50.10.10 26 360 4.5E-96 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 MC28_4456 e2d7276e2fce34e92f7a7c7e1afe4727 364 SUPERFAMILY SSF48208 11 351 1.75E-48 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 MC28_3996 ae646dfbc483a01def5070d56af563b0 285 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 1 284 2.5E-114 T 14-10-2018 MC28_3996 ae646dfbc483a01def5070d56af563b0 285 Pfam PF06800 Sugar transport protein 5 282 7.5E-110 T 14-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 MC28_3996 ae646dfbc483a01def5070d56af563b0 285 SUPERFAMILY SSF103481 36 137 3.27E-10 T 14-10-2018 MC28_3996 ae646dfbc483a01def5070d56af563b0 285 SUPERFAMILY SSF103481 189 271 8.37E-7 T 14-10-2018 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 368 387 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 249 409 5.0E-39 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 Gene3D G3DSA:2.40.110.10 144 248 4.6E-130 T 14-10-2018 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 Gene3D G3DSA:1.20.140.10 249 406 4.6E-130 T 14-10-2018 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 SUPERFAMILY SSF47203 254 425 4.35E-47 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 SUPERFAMILY SSF56645 19 260 3.8E-73 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 Gene3D G3DSA:1.20.140.10 428 569 6.7E-28 T 14-10-2018 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 141 7.0E-27 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 147 159 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 Gene3D G3DSA:1.10.540.10 35 143 4.6E-130 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 MC28_1560 e2c3acbe51ee64da0aa59c44c3a136b8 569 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 145 237 2.9E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 MC28_0894 707fc6f6008dd19bb1af1be0cb6bf123 229 Pfam PF02108 Flagellar assembly protein FliH 85 198 1.1E-7 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE MC28_4851 06897dd0e5a0483268abb6e39d5d7f95 280 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 7 274 6.0E-120 T 14-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 MC28_4851 06897dd0e5a0483268abb6e39d5d7f95 280 SUPERFAMILY SSF52540 6 232 4.14E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4851 06897dd0e5a0483268abb6e39d5d7f95 280 Pfam PF00005 ABC transporter 23 170 6.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4851 06897dd0e5a0483268abb6e39d5d7f95 280 Gene3D G3DSA:3.40.50.300 2 280 2.2E-80 T 14-10-2018 MC28_4851 06897dd0e5a0483268abb6e39d5d7f95 280 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4851 06897dd0e5a0483268abb6e39d5d7f95 280 SMART SM00382 32 218 1.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_F063 656a77ca6604318724d6be82e8278e8f 465 Pfam PF13520 Amino acid permease 31 435 1.7E-64 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_F063 656a77ca6604318724d6be82e8278e8f 465 Gene3D G3DSA:1.20.1740.10 25 464 5.6E-127 T 14-10-2018 MC28_F063 656a77ca6604318724d6be82e8278e8f 465 PIRSF PIRSF006060 11 464 1.5E-88 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5131 8486c9106562f6da47eee2eb53c742ee 74 Hamap MF_00829 UPF0435 protein . 6 73 20.593 T 14-10-2018 IPR009507 Protein of unknown function UPF0435 MC28_5131 8486c9106562f6da47eee2eb53c742ee 74 Pfam PF06569 Protein of unknown function (DUF1128) 3 71 9.8E-32 T 14-10-2018 IPR009507 Protein of unknown function UPF0435 MC28_0621 f412a0aaed7429d73b1b983e71c030da 154 SUPERFAMILY SSF55961 3 144 6.6E-20 T 14-10-2018 MC28_0621 f412a0aaed7429d73b1b983e71c030da 154 Gene3D G3DSA:3.30.530.20 2 149 4.2E-13 T 14-10-2018 IPR023393 START-like domain superfamily MC28_0621 f412a0aaed7429d73b1b983e71c030da 154 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 4 142 1.1E-8 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase MC28_2907 e6b69156cf39fb7f41ed48ede9fcb5bb 176 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 90 169 7.4E-35 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 MC28_2907 e6b69156cf39fb7f41ed48ede9fcb5bb 176 Gene3D G3DSA:1.10.10.10 89 174 9.6E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2907 e6b69156cf39fb7f41ed48ede9fcb5bb 176 SUPERFAMILY SSF53155 9 86 8.04E-14 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 MC28_2907 e6b69156cf39fb7f41ed48ede9fcb5bb 176 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 9 86 4.9E-7 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 MC28_2907 e6b69156cf39fb7f41ed48ede9fcb5bb 176 SUPERFAMILY SSF46767 89 171 1.16E-30 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 MC28_2907 e6b69156cf39fb7f41ed48ede9fcb5bb 176 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 140 146 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 MC28_2907 e6b69156cf39fb7f41ed48ede9fcb5bb 176 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 91 170 6.6E-31 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 MC28_2734 ac0205356af4d2ed3d4a523527332f6c 239 Pfam PF13649 Methyltransferase domain 41 133 2.2E-18 T 14-10-2018 MC28_2734 ac0205356af4d2ed3d4a523527332f6c 239 Gene3D G3DSA:3.40.50.150 2 228 7.9E-40 T 14-10-2018 MC28_2734 ac0205356af4d2ed3d4a523527332f6c 239 SUPERFAMILY SSF53335 12 220 4.34E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3508 198087f2dacf48a89e9fe7407f51e428 104 Pfam PF00893 Small Multidrug Resistance protein 1 92 2.1E-27 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 MC28_3508 198087f2dacf48a89e9fe7407f51e428 104 SUPERFAMILY SSF103481 5 102 1.44E-18 T 14-10-2018 MC28_3508 198087f2dacf48a89e9fe7407f51e428 104 Gene3D G3DSA:1.10.3730.20 1 104 4.5E-30 T 14-10-2018 MC28_0945 fe9055fa2edf87b6424ab4bf110d853d 136 SUPERFAMILY SSF46785 11 128 2.28E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0945 fe9055fa2edf87b6424ab4bf110d853d 136 Gene3D G3DSA:1.10.10.10 1 133 9.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0945 fe9055fa2edf87b6424ab4bf110d853d 136 SMART SM00347 16 116 1.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0945 fe9055fa2edf87b6424ab4bf110d853d 136 Pfam PF01047 MarR family 23 81 1.3E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2961 9dce06b45a3eda253387cd6d7bc569f1 510 SMART SM00382 29 218 1.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2961 9dce06b45a3eda253387cd6d7bc569f1 510 SUPERFAMILY SSF52540 256 489 2.45E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2961 9dce06b45a3eda253387cd6d7bc569f1 510 Pfam PF00005 ABC transporter 21 169 6.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2961 9dce06b45a3eda253387cd6d7bc569f1 510 Gene3D G3DSA:3.40.50.300 1 237 3.1E-56 T 14-10-2018 MC28_2961 9dce06b45a3eda253387cd6d7bc569f1 510 Gene3D G3DSA:3.40.50.300 251 494 2.5E-41 T 14-10-2018 MC28_2961 9dce06b45a3eda253387cd6d7bc569f1 510 Pfam PF00005 ABC transporter 274 429 5.5E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2961 9dce06b45a3eda253387cd6d7bc569f1 510 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2961 9dce06b45a3eda253387cd6d7bc569f1 510 SUPERFAMILY SSF52540 3 225 7.99E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2961 9dce06b45a3eda253387cd6d7bc569f1 510 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4191 6e358450f95ce34fc95d94d4fea776cb 219 SUPERFAMILY SSF50685 126 168 5.23E-7 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_4191 6e358450f95ce34fc95d94d4fea776cb 219 Pfam PF06725 3D domain 126 187 2.2E-18 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 MC28_1322 7dd24bfba9adf3c5611770a57d450a03 232 Gene3D G3DSA:3.40.50.150 32 232 5.3E-64 T 14-10-2018 MC28_1322 7dd24bfba9adf3c5611770a57d450a03 232 Pfam PF08241 Methyltransferase domain 58 150 1.2E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_1322 7dd24bfba9adf3c5611770a57d450a03 232 SUPERFAMILY SSF53335 16 201 1.96E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0141 1a6dafdc35fc8d2ab4f360f65044eccb 252 SUPERFAMILY SSF117856 18 249 1.57E-87 T 14-10-2018 MC28_0141 1a6dafdc35fc8d2ab4f360f65044eccb 252 PIRSF PIRSF001332 5 250 6.8E-105 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 MC28_0141 1a6dafdc35fc8d2ab4f360f65044eccb 252 Gene3D G3DSA:3.30.1330.80 95 217 1.3E-86 T 14-10-2018 MC28_0141 1a6dafdc35fc8d2ab4f360f65044eccb 252 Gene3D G3DSA:3.30.1330.80 20 236 1.3E-86 T 14-10-2018 MC28_0141 1a6dafdc35fc8d2ab4f360f65044eccb 252 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 18 249 1.5E-97 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 MC28_0141 1a6dafdc35fc8d2ab4f360f65044eccb 252 Pfam PF03306 Alpha-acetolactate decarboxylase 20 237 1.1E-88 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 MC28_2200 3fc538ef6b780835ec61e997eb5cb9bd 105 Gene3D G3DSA:1.10.10.10 5 103 1.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2200 3fc538ef6b780835ec61e997eb5cb9bd 105 Pfam PF03551 Transcriptional regulator PadR-like family 23 86 2.1E-13 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_2200 3fc538ef6b780835ec61e997eb5cb9bd 105 SUPERFAMILY SSF46785 7 91 7.69E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3894 f14c0f20a37fddda663266d04daffd5b 275 Pfam PF10978 Protein of unknown function (DUF2785) 76 249 4.9E-50 T 14-10-2018 IPR021247 Protein of unknown function DUF2785 MC28_4992 44ff67a6204dce51df483d2a4ff04126 290 Gene3D G3DSA:3.40.50.150 46 236 3.9E-24 T 14-10-2018 MC28_4992 44ff67a6204dce51df483d2a4ff04126 290 Pfam PF08241 Methyltransferase domain 89 185 8.2E-14 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_4992 44ff67a6204dce51df483d2a4ff04126 290 SUPERFAMILY SSF53335 68 236 2.94E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_D174 7db9cc855f90e5c4062fe740511e2c57 144 Pfam PF01609 Transposase DDE domain 1 51 4.7E-14 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_D174 7db9cc855f90e5c4062fe740511e2c57 144 SUPERFAMILY SSF53098 1 141 7.59E-32 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_0326 9b080d74ccc9cc3dee15a87529cffa57 465 PRINTS PR00154 AMP-binding signature 119 130 5.5E-5 T 14-10-2018 IPR020459 AMP-binding MC28_0326 9b080d74ccc9cc3dee15a87529cffa57 465 PRINTS PR00154 AMP-binding signature 131 139 5.5E-5 T 14-10-2018 IPR020459 AMP-binding MC28_0326 9b080d74ccc9cc3dee15a87529cffa57 465 Pfam PF13193 AMP-binding enzyme C-terminal domain 378 452 2.2E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_0326 9b080d74ccc9cc3dee15a87529cffa57 465 Gene3D G3DSA:3.40.50.12780 1 365 4.8E-120 T 14-10-2018 MC28_0326 9b080d74ccc9cc3dee15a87529cffa57 465 SUPERFAMILY SSF56801 1 464 1.7E-151 T 14-10-2018 MC28_0326 9b080d74ccc9cc3dee15a87529cffa57 465 ProSitePatterns PS00455 Putative AMP-binding domain signature. 124 135 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_0326 9b080d74ccc9cc3dee15a87529cffa57 465 Pfam PF00501 AMP-binding enzyme 2 369 2.8E-105 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_0326 9b080d74ccc9cc3dee15a87529cffa57 465 Gene3D G3DSA:3.30.300.310 366 465 3.3E-34 T 14-10-2018 MC28_1903 1d92b51447d38a9cd355deba9a8f943d 259 Pfam PF02673 Bacitracin resistance protein BacA 6 249 2.9E-76 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_1903 1d92b51447d38a9cd355deba9a8f943d 259 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 254 17.312 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MC28_2365 e001789bb3a11ca968fa163ea7d2db1d 462 Pfam PF00144 Beta-lactamase 10 323 1.3E-52 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_2365 e001789bb3a11ca968fa163ea7d2db1d 462 SUPERFAMILY SSF56601 2 327 6.99E-71 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_2365 e001789bb3a11ca968fa163ea7d2db1d 462 Gene3D G3DSA:3.40.710.10 1 318 2.2E-76 T 14-10-2018 MC28_0247 845c218d6f3057aef1bed45b85d493c9 103 Pfam PF01906 Putative heavy-metal-binding 1 103 6.2E-38 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 MC28_0247 845c218d6f3057aef1bed45b85d493c9 103 Gene3D G3DSA:3.30.110.70 1 103 6.3E-44 T 14-10-2018 MC28_0247 845c218d6f3057aef1bed45b85d493c9 103 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 24.629 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 MC28_0247 845c218d6f3057aef1bed45b85d493c9 103 SUPERFAMILY SSF117782 1 103 1.28E-36 T 14-10-2018 IPR035439 UPF0145 domain superfamily MC28_0108 4bbad4eba98006915c684d8d7713b1aa 265 Pfam PF00106 short chain dehydrogenase 12 202 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0108 4bbad4eba98006915c684d8d7713b1aa 265 Gene3D G3DSA:3.40.50.720 8 249 8.7E-42 T 14-10-2018 MC28_0108 4bbad4eba98006915c684d8d7713b1aa 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_0108 4bbad4eba98006915c684d8d7713b1aa 265 SUPERFAMILY SSF51735 11 235 2.26E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0108 4bbad4eba98006915c684d8d7713b1aa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0108 4bbad4eba98006915c684d8d7713b1aa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0108 4bbad4eba98006915c684d8d7713b1aa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0108 4bbad4eba98006915c684d8d7713b1aa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0108 4bbad4eba98006915c684d8d7713b1aa 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_1154 233431f4b8778e6b040db22a3812de85 333 Gene3D G3DSA:3.50.30.60 165 333 1.3E-64 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily MC28_1154 233431f4b8778e6b040db22a3812de85 333 SUPERFAMILY SSF52317 1 164 3.8E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_1154 233431f4b8778e6b040db22a3812de85 333 Pfam PF02016 LD-carboxypeptidase 13 318 1.4E-73 T 14-10-2018 IPR003507 Peptidase family S66 MC28_1154 233431f4b8778e6b040db22a3812de85 333 SUPERFAMILY SSF141986 178 325 5.62E-43 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily MC28_1154 233431f4b8778e6b040db22a3812de85 333 Gene3D G3DSA:3.40.50.10740 1 164 1.4E-64 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal MC28_1154 233431f4b8778e6b040db22a3812de85 333 PIRSF PIRSF028757 1 332 3.4E-88 T 14-10-2018 IPR003507 Peptidase family S66 MC28_3416 045d5e6092f73dd54a7a9c6de3b65d71 259 SUPERFAMILY SSF52266 56 254 6.06E-31 T 14-10-2018 MC28_3416 045d5e6092f73dd54a7a9c6de3b65d71 259 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 57 245 4.0E-20 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain MC28_3416 045d5e6092f73dd54a7a9c6de3b65d71 259 Gene3D G3DSA:3.40.50.1110 19 255 6.1E-29 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_E103 4697187a9854bf902b1571452080a336 273 SUPERFAMILY SSF52540 1 266 1.31E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_E103 4697187a9854bf902b1571452080a336 273 Gene3D G3DSA:3.40.50.300 1 271 9.1E-67 T 14-10-2018 MC28_E103 4697187a9854bf902b1571452080a336 273 Pfam PF13614 AAA domain 4 186 2.4E-42 T 14-10-2018 IPR025669 AAA domain MC28_1570 163fa561199ab0b6873478c1741ae489 99 Pfam PF01022 Bacterial regulatory protein, arsR family 26 66 1.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_1570 163fa561199ab0b6873478c1741ae489 99 SUPERFAMILY SSF46785 12 86 1.5E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1570 163fa561199ab0b6873478c1741ae489 99 Gene3D G3DSA:1.10.10.10 3 98 5.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1570 163fa561199ab0b6873478c1741ae489 99 SMART SM00418 19 97 1.1E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_3635 e0761746c5a8392b7c6d090e3fcc0fc9 208 Pfam PF00881 Nitroreductase family 10 184 5.5E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_3635 e0761746c5a8392b7c6d090e3fcc0fc9 208 SUPERFAMILY SSF55469 1 205 2.09E-50 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_3635 e0761746c5a8392b7c6d090e3fcc0fc9 208 Gene3D G3DSA:3.40.109.10 1 206 3.1E-56 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_2830 d0bf97092fe50b84e5f135dc6d43eca9 257 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2830 d0bf97092fe50b84e5f135dc6d43eca9 257 SUPERFAMILY SSF52540 1 236 2.3E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2830 d0bf97092fe50b84e5f135dc6d43eca9 257 SMART SM00382 27 223 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2830 d0bf97092fe50b84e5f135dc6d43eca9 257 Pfam PF00005 ABC transporter 18 174 1.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2830 d0bf97092fe50b84e5f135dc6d43eca9 257 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 6.9E-108 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 MC28_2830 d0bf97092fe50b84e5f135dc6d43eca9 257 Gene3D G3DSA:3.40.50.300 1 254 3.8E-60 T 14-10-2018 MC28_1646 e3add7391a60e1e4acad32176bbaf008 441 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 18 434 4.6E-165 T 14-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 MC28_1646 e3add7391a60e1e4acad32176bbaf008 441 Gene3D G3DSA:3.40.640.10 67 332 2.1E-165 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1646 e3add7391a60e1e4acad32176bbaf008 441 Gene3D G3DSA:3.90.1150.10 16 431 2.1E-165 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_1646 e3add7391a60e1e4acad32176bbaf008 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_1646 e3add7391a60e1e4acad32176bbaf008 441 SUPERFAMILY SSF53383 26 437 2.23E-137 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_1646 e3add7391a60e1e4acad32176bbaf008 441 PIRSF PIRSF000521 131 438 3.0E-47 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_1646 e3add7391a60e1e4acad32176bbaf008 441 PIRSF PIRSF000521 1 134 1.9E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_1646 e3add7391a60e1e4acad32176bbaf008 441 Pfam PF00202 Aminotransferase class-III 32 433 2.5E-130 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_5193 d52c075b8e3df8a587e41e226a0a42b0 555 Gene3D G3DSA:3.40.50.300 17 239 5.7E-14 T 14-10-2018 MC28_5193 d52c075b8e3df8a587e41e226a0a42b0 555 Pfam PF03354 Phage Terminase 65 540 2.3E-41 T 14-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type MC28_1749 39e2e4641a326a6e224f6795e2860fdc 152 SUPERFAMILY SSF109854 4 136 9.71E-34 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1749 39e2e4641a326a6e224f6795e2860fdc 152 Pfam PF05163 DinB family 4 146 9.7E-29 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB MC28_1749 39e2e4641a326a6e224f6795e2860fdc 152 Gene3D G3DSA:1.20.120.450 1 152 3.6E-44 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_4983 15318c03024f4b609d13803225fb1aa7 263 Pfam PF03567 Sulfotransferase family 23 258 3.3E-9 T 14-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 MC28_G104 0d3a7da3e4a6d3199e9337729a6d8a64 234 Gene3D G3DSA:3.40.390.10 123 227 8.3E-13 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 MC28_G104 0d3a7da3e4a6d3199e9337729a6d8a64 234 SUPERFAMILY SSF55486 62 221 1.87E-21 T 14-10-2018 MC28_2099 b131505c203720b9e5872d0467d82490 47 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 44 2.4E-19 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_2099 b131505c203720b9e5872d0467d82490 47 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 46 3.0E-21 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_2098 b131505c203720b9e5872d0467d82490 47 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 44 2.4E-19 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_2098 b131505c203720b9e5872d0467d82490 47 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 46 3.0E-21 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_5218 b147ef0155456ef85f09191405ccf85d 84 Pfam PF00364 Biotin-requiring enzyme 10 73 3.3E-5 T 14-10-2018 IPR000089 Biotin/lipoyl attachment MC28_5218 b147ef0155456ef85f09191405ccf85d 84 SUPERFAMILY SSF51230 7 74 2.86E-7 T 14-10-2018 IPR011053 Single hybrid motif MC28_5218 b147ef0155456ef85f09191405ccf85d 84 Gene3D G3DSA:2.40.50.100 3 76 3.0E-8 T 14-10-2018 MC28_4913 b8fa6a7e38da39d187bb8107f429ac86 177 Pfam PF01464 Transglycosylase SLT domain 46 127 1.5E-7 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 MC28_4913 b8fa6a7e38da39d187bb8107f429ac86 177 SUPERFAMILY SSF53955 34 145 1.8E-11 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_4913 b8fa6a7e38da39d187bb8107f429ac86 177 Gene3D G3DSA:1.10.530.10 29 174 2.3E-8 T 14-10-2018 MC28_0549 20f65e66942106628e02c094ac83ee67 127 Pfam PF13045 Protein of unknown function (DUF3905) 25 107 5.1E-47 T 14-10-2018 IPR024999 Protein of unknown function DUF3905 MC28_1898 ddab261765a2c17697a1c3a501002ad0 125 Pfam PF08000 Bacterial PH domain 3 122 8.4E-49 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain MC28_1898 ddab261765a2c17697a1c3a501002ad0 125 SUPERFAMILY SSF50729 6 124 1.07E-44 T 14-10-2018 MC28_1898 ddab261765a2c17697a1c3a501002ad0 125 Gene3D G3DSA:2.30.29.50 1 124 2.6E-50 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily MC28_3657 9bbfd4d3e82afddb599f543d86e2c1ee 256 Gene3D G3DSA:3.40.50.300 1 234 4.8E-64 T 14-10-2018 MC28_3657 9bbfd4d3e82afddb599f543d86e2c1ee 256 SUPERFAMILY SSF52540 2 211 1.17E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3657 9bbfd4d3e82afddb599f543d86e2c1ee 256 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3657 9bbfd4d3e82afddb599f543d86e2c1ee 256 SMART SM00382 10 199 2.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3657 9bbfd4d3e82afddb599f543d86e2c1ee 256 Pfam PF00005 ABC transporter 2 149 8.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0646 b444c0907b0af342dc3818f60694cbf9 239 Gene3D G3DSA:3.20.20.70 1 238 1.2E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0646 b444c0907b0af342dc3818f60694cbf9 239 Pfam PF00977 Histidine biosynthesis protein 2 227 7.8E-77 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 MC28_0646 b444c0907b0af342dc3818f60694cbf9 239 SUPERFAMILY SSF51366 1 235 3.97E-72 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 MC28_0646 b444c0907b0af342dc3818f60694cbf9 239 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 231 1.9E-85 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 MC28_0646 b444c0907b0af342dc3818f60694cbf9 239 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 235 35.89 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 MC28_3706 4d3abc5914051a0e925985e0ba638e61 218 Pfam PF04239 Protein of unknown function (DUF421) 88 196 7.1E-37 T 14-10-2018 IPR007353 Protein of unknown function DUF421 MC28_3706 4d3abc5914051a0e925985e0ba638e61 218 Gene3D G3DSA:3.30.240.20 80 154 3.5E-28 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_3706 4d3abc5914051a0e925985e0ba638e61 218 Gene3D G3DSA:3.30.240.20 161 218 2.5E-13 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_1854 c16ddeef970de40c8bc585a0ab222f36 344 Pfam PF00144 Beta-lactamase 26 333 4.8E-40 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_1854 c16ddeef970de40c8bc585a0ab222f36 344 SUPERFAMILY SSF56601 9 333 4.27E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1854 c16ddeef970de40c8bc585a0ab222f36 344 Gene3D G3DSA:3.40.710.10 10 344 2.7E-107 T 14-10-2018 MC28_G164 33113640e62a9535f98365503f5aad2f 626 Pfam PF02687 FtsX-like permease family 82 174 1.1E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_G164 33113640e62a9535f98365503f5aad2f 626 PIRSF PIRSF018968 1 626 1.4E-109 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 PRINTS PR00118 Beta-lactamase class A signature 58 82 1.6E-64 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 PRINTS PR00118 Beta-lactamase class A signature 89 106 1.6E-64 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 PRINTS PR00118 Beta-lactamase class A signature 244 259 1.6E-64 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 PRINTS PR00118 Beta-lactamase class A signature 129 154 1.6E-64 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 PRINTS PR00118 Beta-lactamase class A signature 165 189 1.6E-64 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 PRINTS PR00118 Beta-lactamase class A signature 191 216 1.6E-64 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 PRINTS PR00118 Beta-lactamase class A signature 227 242 1.6E-64 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 Pfam PF13354 Beta-lactamase enzyme family 79 284 2.3E-35 T 14-10-2018 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 Gene3D G3DSA:3.40.710.10 43 311 1.3E-78 T 14-10-2018 MC28_0176 cca151455a1aa38d303bd7a519c06270 315 SUPERFAMILY SSF56601 57 311 1.4E-72 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_0176 cca151455a1aa38d303bd7a519c06270 315 ProSitePatterns PS00146 Beta-lactamase class-A active site. 91 106 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 MC28_3737 eed5f4d291a6ebae0c92434420086abd 457 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 8 393 2.2E-106 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 MC28_3737 eed5f4d291a6ebae0c92434420086abd 457 Pfam PF10150 Ribonuclease E/G family 101 359 9.4E-83 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 MC28_3737 eed5f4d291a6ebae0c92434420086abd 457 Gene3D G3DSA:2.40.50.140 25 104 6.7E-21 T 14-10-2018 MC28_3737 eed5f4d291a6ebae0c92434420086abd 457 SUPERFAMILY SSF50249 33 101 1.09E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_0992 967cf7069554d06af624d64b38f22ba1 432 SUPERFAMILY SSF55874 280 423 7.33E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0992 967cf7069554d06af624d64b38f22ba1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 379 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0992 967cf7069554d06af624d64b38f22ba1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0992 967cf7069554d06af624d64b38f22ba1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0992 967cf7069554d06af624d64b38f22ba1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_0992 967cf7069554d06af624d64b38f22ba1 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 424 1.4E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0992 967cf7069554d06af624d64b38f22ba1 432 SMART SM00387 314 426 9.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_0992 967cf7069554d06af624d64b38f22ba1 432 Gene3D G3DSA:3.30.565.10 274 425 1.3E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4592 d101353e7dbcf57b770a6d7c6677be2e 248 Pfam PF00557 Metallopeptidase family M24 11 238 8.8E-48 T 14-10-2018 IPR000994 Peptidase M24 MC28_4592 d101353e7dbcf57b770a6d7c6677be2e 248 SUPERFAMILY SSF55920 2 246 1.31E-69 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like MC28_4592 d101353e7dbcf57b770a6d7c6677be2e 248 Gene3D G3DSA:3.90.230.10 1 248 5.8E-86 T 14-10-2018 MC28_4592 d101353e7dbcf57b770a6d7c6677be2e 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 247 1.0E-89 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4592 d101353e7dbcf57b770a6d7c6677be2e 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 5.4E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4592 d101353e7dbcf57b770a6d7c6677be2e 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 189 201 5.4E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4592 d101353e7dbcf57b770a6d7c6677be2e 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 5.4E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4592 d101353e7dbcf57b770a6d7c6677be2e 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 157 169 5.4E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_4592 d101353e7dbcf57b770a6d7c6677be2e 248 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 35.743 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 MC28_1289 70ef8fb6a7925731fc1906b0705835b0 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 149 169 2.2E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1289 70ef8fb6a7925731fc1906b0705835b0 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.2E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1289 70ef8fb6a7925731fc1906b0705835b0 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 135 2.2E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1289 70ef8fb6a7925731fc1906b0705835b0 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 115 2.2E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1289 70ef8fb6a7925731fc1906b0705835b0 181 Pfam PF01047 MarR family 65 123 2.1E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1289 70ef8fb6a7925731fc1906b0705835b0 181 ProSitePatterns PS01117 MarR-type HTH domain signature. 98 132 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site MC28_1289 70ef8fb6a7925731fc1906b0705835b0 181 SMART SM00347 51 159 1.2E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1289 70ef8fb6a7925731fc1906b0705835b0 181 SUPERFAMILY SSF46785 23 170 1.17E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1289 70ef8fb6a7925731fc1906b0705835b0 181 Gene3D G3DSA:1.10.10.10 15 176 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3121 a7f430b1aa0c0310f265818c75342c8c 156 Pfam PF04472 Cell division protein SepF 66 137 1.0E-29 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 MC28_3121 a7f430b1aa0c0310f265818c75342c8c 156 Gene3D G3DSA:3.30.110.150 59 156 2.1E-32 T 14-10-2018 IPR038594 SepF-like superfamily MC28_3121 a7f430b1aa0c0310f265818c75342c8c 156 Hamap MF_01197 Cell division protein SepF [sepF]. 1 145 18.54 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 MC28_D086 7754bf04166be9421268dff9e1b9274e 163 ProDom PD275198 PLASMID LIPOPROTEIN PALMITATE MEMBRANE PXO2-32/BXB0031/GBAA_PXO2_0031 PRECURSOR SIGNAL 13 163 5.0E-71 T 14-10-2018 IPR020257 Protein of unknown function DUF5512 MC28_D086 7754bf04166be9421268dff9e1b9274e 163 Pfam PF17631 Family of unknown function (DUF5512) 29 163 1.8E-25 T 14-10-2018 IPR020257 Protein of unknown function DUF5512 MC28_4048 5f7a18cfceab7e2778548d0bb861d2c8 381 Pfam PF13439 Glycosyltransferase Family 4 15 178 3.7E-22 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 MC28_4048 5f7a18cfceab7e2778548d0bb861d2c8 381 Pfam PF00534 Glycosyl transferases group 1 190 348 6.2E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_4048 5f7a18cfceab7e2778548d0bb861d2c8 381 SUPERFAMILY SSF53756 1 373 1.91E-81 T 14-10-2018 MC28_4048 5f7a18cfceab7e2778548d0bb861d2c8 381 Gene3D G3DSA:3.40.50.2000 1 196 6.6E-28 T 14-10-2018 MC28_4048 5f7a18cfceab7e2778548d0bb861d2c8 381 Gene3D G3DSA:3.40.50.2000 197 355 1.0E-38 T 14-10-2018 MC28_F061 8715c595dff57856c9ad899f5e903223 454 PIRSF PIRSF006060 3 454 2.3E-85 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_F061 8715c595dff57856c9ad899f5e903223 454 Pfam PF13520 Amino acid permease 13 416 2.2E-61 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_F061 8715c595dff57856c9ad899f5e903223 454 Gene3D G3DSA:1.20.1740.10 7 453 5.1E-94 T 14-10-2018 MC28_2341 cff2f979c1d3c0fe946ac11d4b98cf61 503 PIRSF PIRSF005690 30 501 1.4E-152 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_2341 cff2f979c1d3c0fe946ac11d4b98cf61 503 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 45 486 2.0E-153 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 352 3.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 366 3.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 389 3.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 Gene3D G3DSA:1.20.1480.50 99 188 4.8E-6 T 14-10-2018 MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 Gene3D G3DSA:3.30.565.10 261 410 2.3E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 SUPERFAMILY SSF47384 181 255 2.55E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 Pfam PF00512 His Kinase A (phospho-acceptor) domain 194 255 2.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 Gene3D G3DSA:1.10.287.130 189 256 4.6E-10 T 14-10-2018 MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 SUPERFAMILY SSF55874 246 407 1.83E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 SMART SM00388 191 256 1.4E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 407 1.5E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_F139 c3fcf6b836c484dbe07b456bee572f7f 410 SMART SM00387 301 410 1.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3048 574721bd817001cb50ca8b971daf43b4 240 PIRSF PIRSF005650 1 240 2.5E-98 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 MC28_3048 574721bd817001cb50ca8b971daf43b4 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 44.828 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 MC28_3048 574721bd817001cb50ca8b971daf43b4 240 Pfam PF00696 Amino acid kinase family 7 217 1.1E-29 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 MC28_3048 574721bd817001cb50ca8b971daf43b4 240 Gene3D G3DSA:3.40.1160.10 2 239 1.7E-82 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_3048 574721bd817001cb50ca8b971daf43b4 240 SUPERFAMILY SSF53633 4 238 1.7E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily MC28_3048 574721bd817001cb50ca8b971daf43b4 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 2.7E-102 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 MC28_1988 3320cbc14575d5b43044b69fc2a6cace 231 Pfam PF03781 Sulfatase-modifying factor enzyme 1 12 223 4.5E-38 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 MC28_1988 3320cbc14575d5b43044b69fc2a6cace 231 Gene3D G3DSA:3.90.1580.10 2 224 1.2E-66 T 14-10-2018 MC28_1988 3320cbc14575d5b43044b69fc2a6cace 231 SUPERFAMILY SSF56436 10 225 3.53E-54 T 14-10-2018 IPR016187 C-type lectin fold MC28_4859 82af9a4d3a74bc7e80acc27c50fec486 354 SUPERFAMILY SSF117916 1 69 2.06E-7 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily MC28_4859 82af9a4d3a74bc7e80acc27c50fec486 354 Pfam PF01883 Iron-sulfur cluster assembly protein 4 57 6.2E-6 T 14-10-2018 IPR002744 MIP18 family-like MC28_4859 82af9a4d3a74bc7e80acc27c50fec486 354 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 108 345 2.4E-83 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 MC28_4859 82af9a4d3a74bc7e80acc27c50fec486 354 SUPERFAMILY SSF52540 100 314 1.1E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4859 82af9a4d3a74bc7e80acc27c50fec486 354 Hamap MF_02040 Iron-sulfur cluster carrier protein. 98 346 33.714 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein MC28_4859 82af9a4d3a74bc7e80acc27c50fec486 354 ProSitePatterns PS01215 Mrp family signature. 211 227 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 MC28_4859 82af9a4d3a74bc7e80acc27c50fec486 354 Gene3D G3DSA:3.30.300.130 1 88 4.9E-5 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily MC28_4859 82af9a4d3a74bc7e80acc27c50fec486 354 Gene3D G3DSA:3.40.50.300 93 323 3.3E-66 T 14-10-2018 MC28_3105 6205ba53126981b7446f6800695072b3 210 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 8 175 5.7E-50 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3105 6205ba53126981b7446f6800695072b3 210 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 210 30.331 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 MC28_3105 6205ba53126981b7446f6800695072b3 210 Pfam PF00156 Phosphoribosyl transferase domain 44 158 7.4E-19 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 MC28_3105 6205ba53126981b7446f6800695072b3 210 Gene3D G3DSA:3.40.50.2020 1 210 6.9E-68 T 14-10-2018 MC28_3105 6205ba53126981b7446f6800695072b3 210 SUPERFAMILY SSF53271 2 203 5.38E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_1225 d70d776ca82bb02b50e93ac1355a59e1 102 Gene3D G3DSA:1.10.10.10 3 97 9.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1225 d70d776ca82bb02b50e93ac1355a59e1 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 6.9E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_1225 d70d776ca82bb02b50e93ac1355a59e1 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 6.9E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_1225 d70d776ca82bb02b50e93ac1355a59e1 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 6.9E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_1225 d70d776ca82bb02b50e93ac1355a59e1 102 SMART SM00418 16 93 3.0E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_1225 d70d776ca82bb02b50e93ac1355a59e1 102 Pfam PF01022 Bacterial regulatory protein, arsR family 23 65 2.6E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_1225 d70d776ca82bb02b50e93ac1355a59e1 102 SUPERFAMILY SSF46785 2 93 1.05E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1544 bb32d734c8a46e8fc1de4fc905bdef00 332 SUPERFAMILY SSF51445 4 187 1.9E-39 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_1544 bb32d734c8a46e8fc1de4fc905bdef00 332 Gene3D G3DSA:3.20.20.80 2 191 1.9E-69 T 14-10-2018 MC28_1544 bb32d734c8a46e8fc1de4fc905bdef00 332 Pfam PF01183 Glycosyl hydrolases family 25 5 168 7.9E-21 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 MC28_1631 393d9196d7ea70886bcdee0fa97aa2ba 295 Pfam PF00892 EamA-like transporter family 7 139 1.2E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_1631 393d9196d7ea70886bcdee0fa97aa2ba 295 Pfam PF00892 EamA-like transporter family 152 286 5.2E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_1631 393d9196d7ea70886bcdee0fa97aa2ba 295 SUPERFAMILY SSF103481 38 143 8.76E-19 T 14-10-2018 MC28_1631 393d9196d7ea70886bcdee0fa97aa2ba 295 SUPERFAMILY SSF103481 191 290 3.27E-11 T 14-10-2018 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 106 123 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 PIRSF PIRSF000097 1 98 3.6E-32 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 PIRSF PIRSF000097 95 254 3.1E-51 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 SUPERFAMILY SSF51430 2 248 2.75E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 Gene3D G3DSA:3.20.20.100 1 255 2.3E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 25 42 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 PRINTS PR00069 Aldo-keto reductase signature 76 94 6.6E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 PRINTS PR00069 Aldo-keto reductase signature 106 123 6.6E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 PRINTS PR00069 Aldo-keto reductase signature 21 45 6.6E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 PRINTS PR00069 Aldo-keto reductase signature 140 169 6.6E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 PRINTS PR00069 Aldo-keto reductase signature 177 201 6.6E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 210 225 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_4040 a1147e2c26cce7adab1d8edd0049c4a6 256 Pfam PF00248 Aldo/keto reductase family 9 242 4.8E-52 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_F032 d3d1504d34ca3457278d8a83651e2434 69 Pfam PF01381 Helix-turn-helix 4 57 1.6E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F032 d3d1504d34ca3457278d8a83651e2434 69 SUPERFAMILY SSF47413 3 61 1.07E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_F032 d3d1504d34ca3457278d8a83651e2434 69 Gene3D G3DSA:1.10.260.40 2 69 4.6E-9 T 14-10-2018 MC28_F032 d3d1504d34ca3457278d8a83651e2434 69 SMART SM00530 3 58 4.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3173 b5874d1151d4bc3a3162cfbeb0b1402d 473 Gene3D G3DSA:3.40.50.300 3 170 1.6E-24 T 14-10-2018 MC28_3173 b5874d1151d4bc3a3162cfbeb0b1402d 473 Pfam PF03354 Phage Terminase 1 449 3.2E-75 T 14-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type MC28_0424 afa4403d6339fc5caa53e57933d3d8e1 268 Pfam PF01513 ATP-NAD kinase 34 189 2.7E-25 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 MC28_0424 afa4403d6339fc5caa53e57933d3d8e1 268 Gene3D G3DSA:3.40.50.10330 19 265 1.1E-96 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 MC28_0424 afa4403d6339fc5caa53e57933d3d8e1 268 SUPERFAMILY SSF111331 10 264 2.09E-64 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily MC28_0424 afa4403d6339fc5caa53e57933d3d8e1 268 Gene3D G3DSA:2.60.200.30 105 243 1.1E-96 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 MC28_0424 afa4403d6339fc5caa53e57933d3d8e1 268 Hamap MF_00361 NAD kinase [nadK]. 4 266 24.711 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 MC28_0431 e48a25e7d0b391e5a8b3465c857da24f 281 SUPERFAMILY SSF53335 82 250 4.32E-8 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0431 e48a25e7d0b391e5a8b3465c857da24f 281 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 8 280 6.3E-112 T 14-10-2018 IPR008884 Macrocin-O-methyltransferase MC28_0077 a57a686575ffac87eca7823d2aa70162 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 284 1.3E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0077 a57a686575ffac87eca7823d2aa70162 288 Gene3D G3DSA:1.10.3720.10 66 280 5.8E-10 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0077 a57a686575ffac87eca7823d2aa70162 288 SUPERFAMILY SSF161098 70 272 9.03E-10 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5441 adccfc8f7bf96fdbe1e66669382e6923 305 SUPERFAMILY SSF53850 53 301 1.5E-70 T 14-10-2018 MC28_5441 adccfc8f7bf96fdbe1e66669382e6923 305 Gene3D G3DSA:3.40.190.10 130 257 4.4E-81 T 14-10-2018 MC28_5441 adccfc8f7bf96fdbe1e66669382e6923 305 Gene3D G3DSA:3.40.190.10 57 299 4.4E-81 T 14-10-2018 MC28_5441 adccfc8f7bf96fdbe1e66669382e6923 305 Pfam PF12849 PBP superfamily domain 46 283 3.2E-37 T 14-10-2018 IPR024370 PBP domain MC28_5441 adccfc8f7bf96fdbe1e66669382e6923 305 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 8 300 4.9E-98 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 MC28_F193 627a12a2b15fa04c6faa81ff773c7c6d 318 Gene3D G3DSA:3.40.50.720 2 305 7.8E-126 T 14-10-2018 MC28_F193 627a12a2b15fa04c6faa81ff773c7c6d 318 Gene3D G3DSA:3.90.25.10 192 313 7.8E-126 T 14-10-2018 MC28_F193 627a12a2b15fa04c6faa81ff773c7c6d 318 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 303 9.5E-89 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_F193 627a12a2b15fa04c6faa81ff773c7c6d 318 SUPERFAMILY SSF51735 2 317 4.19E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_F193 627a12a2b15fa04c6faa81ff773c7c6d 318 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 318 3.8E-145 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 MC28_5083 5d34151fde070cf7de35cebd6d6b3aed 264 Gene3D G3DSA:3.40.190.10 121 217 8.0E-71 T 14-10-2018 MC28_5083 5d34151fde070cf7de35cebd6d6b3aed 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 253 1.6E-68 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_5083 5d34151fde070cf7de35cebd6d6b3aed 264 SMART SM00079 37 254 9.1E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 MC28_5083 5d34151fde070cf7de35cebd6d6b3aed 264 Gene3D G3DSA:3.40.190.10 37 252 8.0E-71 T 14-10-2018 MC28_5083 5d34151fde070cf7de35cebd6d6b3aed 264 SUPERFAMILY SSF53850 1 255 2.91E-69 T 14-10-2018 MC28_5083 5d34151fde070cf7de35cebd6d6b3aed 264 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 60 73 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site MC28_5083 5d34151fde070cf7de35cebd6d6b3aed 264 SMART SM00062 37 255 3.9E-65 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_5062 5c0ea0c5960db38bf9bde5ce00303768 347 Pfam PF01008 Initiation factor 2 subunit family 47 336 1.8E-81 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 MC28_5062 5c0ea0c5960db38bf9bde5ce00303768 347 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 347 38.967 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 MC28_5062 5c0ea0c5960db38bf9bde5ce00303768 347 SUPERFAMILY SSF100950 6 340 3.98E-119 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_5062 5c0ea0c5960db38bf9bde5ce00303768 347 Gene3D G3DSA:1.20.120.420 2 148 4.7E-50 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 MC28_5062 5c0ea0c5960db38bf9bde5ce00303768 347 Gene3D G3DSA:3.40.50.10470 149 347 9.7E-65 T 14-10-2018 MC28_5062 5c0ea0c5960db38bf9bde5ce00303768 347 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 34 336 8.1E-114 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 MC28_5062 5c0ea0c5960db38bf9bde5ce00303768 347 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 336 8.1E-136 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 MC28_5136 df1b92eec36be2d48044d3f233d8f7fe 316 Pfam PF00892 EamA-like transporter family 167 301 1.5E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_5136 df1b92eec36be2d48044d3f233d8f7fe 316 Pfam PF00892 EamA-like transporter family 15 154 9.4E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_5136 df1b92eec36be2d48044d3f233d8f7fe 316 SUPERFAMILY SSF103481 221 305 7.32E-11 T 14-10-2018 MC28_5136 df1b92eec36be2d48044d3f233d8f7fe 316 SUPERFAMILY SSF103481 54 157 1.83E-12 T 14-10-2018 MC28_3917 64f3f17dec1e11816c027e495c180329 166 Pfam PF08534 Redoxin 19 159 8.8E-24 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 MC28_3917 64f3f17dec1e11816c027e495c180329 166 SUPERFAMILY SSF52833 3 160 2.62E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_3917 64f3f17dec1e11816c027e495c180329 166 Gene3D G3DSA:3.40.30.10 1 165 1.4E-47 T 14-10-2018 MC28_3917 64f3f17dec1e11816c027e495c180329 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 MC28_3917 64f3f17dec1e11816c027e495c180329 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 163 38.429 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 MC28_3297 e972662ecca6105dc9990ff714fed701 424 SMART SM00387 314 421 2.5E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3297 e972662ecca6105dc9990ff714fed701 424 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 1.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_3297 e972662ecca6105dc9990ff714fed701 424 SUPERFAMILY SSF47384 200 271 8.24E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 MC28_3297 e972662ecca6105dc9990ff714fed701 424 SMART SM00388 209 273 1.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MC28_3297 e972662ecca6105dc9990ff714fed701 424 Gene3D G3DSA:3.30.565.10 274 423 7.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3297 e972662ecca6105dc9990ff714fed701 424 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 418 9.4E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3297 e972662ecca6105dc9990ff714fed701 424 SUPERFAMILY SSF55874 263 419 1.83E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3297 e972662ecca6105dc9990ff714fed701 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 6.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3297 e972662ecca6105dc9990ff714fed701 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 399 6.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3297 e972662ecca6105dc9990ff714fed701 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 418 6.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_3297 e972662ecca6105dc9990ff714fed701 424 Gene3D G3DSA:1.10.287.130 212 270 1.9E-17 T 14-10-2018 MC28_F244 e580dfaa58d2f760364741fb824aa42e 388 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 147 160 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_F244 e580dfaa58d2f760364741fb824aa42e 388 SUPERFAMILY SSF52540 113 311 1.07E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F244 e580dfaa58d2f760364741fb824aa42e 388 Pfam PF01580 FtsK/SpoIIIE family 115 290 3.3E-24 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MC28_F244 e580dfaa58d2f760364741fb824aa42e 388 Gene3D G3DSA:3.40.50.300 108 368 1.0E-59 T 14-10-2018 MC28_0971 bc51ba57e6869962354ca8e1b40632ff 249 Pfam PF05569 BlaR1 peptidase M56 30 211 1.3E-13 T 14-10-2018 IPR008756 Peptidase M56 MC28_0971 bc51ba57e6869962354ca8e1b40632ff 249 Gene3D G3DSA:3.30.2010.10 73 136 4.5E-7 T 14-10-2018 MC28_0767 ae0aa1691d0c7c3ee29d48d750ed91c9 131 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 1 120 7.1E-58 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 MC28_0767 ae0aa1691d0c7c3ee29d48d750ed91c9 131 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 61 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 MC28_0767 ae0aa1691d0c7c3ee29d48d750ed91c9 131 PIRSF PIRSF006614 1 131 6.7E-62 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 MC28_0767 ae0aa1691d0c7c3ee29d48d750ed91c9 131 Gene3D G3DSA:3.40.50.1380 1 131 3.9E-56 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily MC28_0767 ae0aa1691d0c7c3ee29d48d750ed91c9 131 SUPERFAMILY SSF52335 1 128 7.59E-52 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily MC28_0767 ae0aa1691d0c7c3ee29d48d750ed91c9 131 SMART SM00851 14 107 3.3E-23 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain MC28_0767 ae0aa1691d0c7c3ee29d48d750ed91c9 131 Pfam PF02142 MGS-like domain 15 107 2.0E-17 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain MC28_0767 ae0aa1691d0c7c3ee29d48d750ed91c9 131 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 34.079 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 MC28_5085 d7729b771af65637c7f73849bbf3ec05 439 Gene3D G3DSA:1.20.1480.50 51 135 2.9E-10 T 14-10-2018 MC28_5085 d7729b771af65637c7f73849bbf3ec05 439 SMART SM00283 156 438 3.8E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_5085 d7729b771af65637c7f73849bbf3ec05 439 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 238 390 2.6E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_5085 d7729b771af65637c7f73849bbf3ec05 439 SMART SM00304 81 134 3.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_5085 d7729b771af65637c7f73849bbf3ec05 439 Gene3D G3DSA:1.10.287.950 136 438 8.3E-61 T 14-10-2018 MC28_5085 d7729b771af65637c7f73849bbf3ec05 439 SUPERFAMILY SSF58104 110 437 6.93E-64 T 14-10-2018 MC28_5085 d7729b771af65637c7f73849bbf3ec05 439 Pfam PF00672 HAMP domain 83 130 3.0E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_0164 f0b04c350110f9f3ca2ee3ae183d9759 316 SUPERFAMILY SSF161098 92 296 5.23E-20 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0164 f0b04c350110f9f3ca2ee3ae183d9759 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 313 7.6E-47 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0164 f0b04c350110f9f3ca2ee3ae183d9759 316 Gene3D G3DSA:1.10.3720.10 85 308 3.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 3.7E-65 T 14-10-2018 MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 Gene3D G3DSA:3.40.50.720 1 261 2.2E-86 T 14-10-2018 MC28_3995 6adcf7a6bc5b0c7111871f482b647911 261 SUPERFAMILY SSF51735 6 253 1.45E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_F143 68615ed420b8cbbc10f285e9396f4592 237 Gene3D G3DSA:3.40.50.300 1 233 5.0E-68 T 14-10-2018 MC28_F143 68615ed420b8cbbc10f285e9396f4592 237 SMART SM00382 32 225 5.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_F143 68615ed420b8cbbc10f285e9396f4592 237 Pfam PF00005 ABC transporter 23 169 2.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_F143 68615ed420b8cbbc10f285e9396f4592 237 SUPERFAMILY SSF52540 4 224 9.61E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F143 68615ed420b8cbbc10f285e9396f4592 237 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_G369 6f22fe0e62fe86196ed7cb1baa28f66f 611 SMART SM00382 235 370 1.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_G369 6f22fe0e62fe86196ed7cb1baa28f66f 611 SUPERFAMILY SSF52540 220 348 6.47E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G369 6f22fe0e62fe86196ed7cb1baa28f66f 611 Gene3D G3DSA:3.40.50.300 215 359 1.1E-7 T 14-10-2018 MC28_G369 6f22fe0e62fe86196ed7cb1baa28f66f 611 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 237 588 2.6E-52 T 14-10-2018 IPR018647 Domain of unknown function DUF2075 MC28_4970 f2b27e2879a0690fbcc4c444a329a4d2 441 PIRSF PIRSF005353 1 441 3.3E-171 T 14-10-2018 IPR026033 Purine permease PbuG-like MC28_4970 f2b27e2879a0690fbcc4c444a329a4d2 441 Pfam PF00860 Permease family 17 402 4.0E-41 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 MC28_1061 fe3d4c32216d9fa38c33b9e979ce7098 402 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 54 231 2.9E-66 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_1061 fe3d4c32216d9fa38c33b9e979ce7098 402 SUPERFAMILY SSF58100 45 390 2.56E-97 T 14-10-2018 MC28_1061 fe3d4c32216d9fa38c33b9e979ce7098 402 Gene3D G3DSA:1.20.1170.10 59 397 1.8E-121 T 14-10-2018 MC28_2783 a45c7e1bdeedf22b8859ee26e39665f8 150 SUPERFAMILY SSF55846 15 140 7.2E-37 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_2783 a45c7e1bdeedf22b8859ee26e39665f8 150 SMART SM00701 9 129 1.3E-7 T 14-10-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_2783 a45c7e1bdeedf22b8859ee26e39665f8 150 Gene3D G3DSA:3.40.80.10 11 149 5.6E-38 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_2783 a45c7e1bdeedf22b8859ee26e39665f8 150 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 19 137 1.5E-25 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_2783 a45c7e1bdeedf22b8859ee26e39665f8 150 SMART SM00644 9 137 2.6E-12 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 MC28_G078 353702539bc3d2f5818ab349e0b9b9bb 232 SUPERFAMILY SSF55021 151 231 2.25E-7 T 14-10-2018 MC28_G078 353702539bc3d2f5818ab349e0b9b9bb 232 Gene3D G3DSA:3.30.70.260 154 230 4.9E-5 T 14-10-2018 MC28_0013 3893331b181241d04062729ee5de96a5 339 SUPERFAMILY SSF69572 2 330 2.49E-87 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 MC28_0013 3893331b181241d04062729ee5de96a5 339 Pfam PF00899 ThiF family 5 241 7.5E-61 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MC28_0013 3893331b181241d04062729ee5de96a5 339 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 4 206 6.8E-84 T 14-10-2018 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892 MC28_0013 3893331b181241d04062729ee5de96a5 339 Gene3D G3DSA:3.40.50.720 2 250 7.0E-76 T 14-10-2018 MC28_2370 5480f868b8672e36a19431611594edbe 387 Pfam PF02655 ATP-grasp domain 115 278 6.5E-13 T 14-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 MC28_2370 5480f868b8672e36a19431611594edbe 387 Gene3D G3DSA:3.30.470.20 196 277 5.1E-20 T 14-10-2018 MC28_2370 5480f868b8672e36a19431611594edbe 387 Gene3D G3DSA:3.30.1490.20 107 195 5.1E-20 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 MC28_2370 5480f868b8672e36a19431611594edbe 387 SUPERFAMILY SSF56059 107 287 1.86E-21 T 14-10-2018 MC28_2370 5480f868b8672e36a19431611594edbe 387 Gene3D G3DSA:3.40.50.20 7 106 5.1E-20 T 14-10-2018 MC28_1109 66d2f6bb66d42bfc06b8f8bd3d7cd5df 192 Pfam PF13796 Putative sensor 11 186 1.7E-24 T 14-10-2018 IPR025828 Putative sensor domain MC28_1175 7b5cd9d267a7e69a2d4ab9de631ad8f0 773 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 402 727 9.1E-139 T 14-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 MC28_1060 d82b739fe387fa4de1364d0c37b2b155 386 Gene3D G3DSA:1.20.1170.10 45 386 3.0E-129 T 14-10-2018 MC28_1060 d82b739fe387fa4de1364d0c37b2b155 386 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 42 215 5.1E-55 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_1060 d82b739fe387fa4de1364d0c37b2b155 386 SUPERFAMILY SSF58100 40 385 5.75E-71 T 14-10-2018 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 40 278 5.0E-92 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 Pfam PF03129 Anticodon binding domain 404 491 1.1E-22 T 14-10-2018 IPR004154 Anticodon-binding MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 Gene3D G3DSA:3.40.50.800 399 495 2.1E-31 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 SUPERFAMILY SSF55681 38 407 9.0E-125 T 14-10-2018 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 38 494 53.06 T 14-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 200 375 3.1E-9 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 SUPERFAMILY SSF52954 391 493 1.51E-33 T 14-10-2018 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 PRINTS PR01043 Glycyl-tRNA synthetase signature 183 195 9.5E-53 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 PRINTS PR01043 Glycyl-tRNA synthetase signature 253 263 9.5E-53 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 PRINTS PR01043 Glycyl-tRNA synthetase signature 236 253 9.5E-53 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 PRINTS PR01043 Glycyl-tRNA synthetase signature 439 458 9.5E-53 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 PRINTS PR01043 Glycyl-tRNA synthetase signature 60 74 9.5E-53 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 PRINTS PR01043 Glycyl-tRNA synthetase signature 204 221 9.5E-53 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_4183 d188f41e43eb9bd702dedd30f7cd1b48 495 PRINTS PR01043 Glycyl-tRNA synthetase signature 360 372 9.5E-53 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 MC28_0718 3185fba4f241ab1280a020519b27eaab 353 PIRSF PIRSF021350 1 353 3.2E-126 T 14-10-2018 IPR008308 Uncharacterised conserved protein UCP021350 MC28_0718 3185fba4f241ab1280a020519b27eaab 353 Pfam PF14493 Helix-turn-helix domain 257 344 3.8E-22 T 14-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 MC28_4888 c6e57e91a6a9081a46152ef9b1995120 334 SUPERFAMILY SSF161098 98 295 4.25E-21 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4888 c6e57e91a6a9081a46152ef9b1995120 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 312 2.0E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_4888 c6e57e91a6a9081a46152ef9b1995120 334 Gene3D G3DSA:1.10.3720.10 93 313 2.9E-18 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4888 c6e57e91a6a9081a46152ef9b1995120 334 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 81 4.4E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain MC28_2883 8135430184f20cb91fb2fb7dd7432445 387 Gene3D G3DSA:3.40.50.1970 1 184 6.6E-56 T 14-10-2018 MC28_2883 8135430184f20cb91fb2fb7dd7432445 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 MC28_2883 8135430184f20cb91fb2fb7dd7432445 387 Gene3D G3DSA:1.20.1090.10 185 386 1.6E-46 T 14-10-2018 MC28_2883 8135430184f20cb91fb2fb7dd7432445 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 MC28_2883 8135430184f20cb91fb2fb7dd7432445 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 378 6.3E-101 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 MC28_2883 8135430184f20cb91fb2fb7dd7432445 387 SUPERFAMILY SSF56796 1 385 1.19E-118 T 14-10-2018 MC28_4710 5060e47b417b5a4579320dd6bca87764 198 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 44 182 9.2E-70 T 14-10-2018 IPR009665 Protein of unknown function DUF1256 MC28_4710 5060e47b417b5a4579320dd6bca87764 198 SUPERFAMILY SSF53163 10 195 2.88E-54 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily MC28_4710 5060e47b417b5a4579320dd6bca87764 198 Pfam PF06866 Protein of unknown function (DUF1256) 19 180 8.6E-65 T 14-10-2018 IPR009665 Protein of unknown function DUF1256 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 SUPERFAMILY SSF102735 1 128 1.31E-37 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 TIGRFAM TIGR00115 tig: trigger factor 14 421 1.6E-143 T 14-10-2018 IPR005215 Trigger factor GO:0015031 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 238 4.2E-14 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.9E-42 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 Hamap MF_00303 Trigger factor [tig]. 1 425 23.9 T 14-10-2018 IPR005215 Trigger factor GO:0015031 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 6.2E-50 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 SUPERFAMILY SSF54534 89 243 1.16E-37 T 14-10-2018 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 PIRSF PIRSF003095 1 425 2.0E-139 T 14-10-2018 IPR005215 Trigger factor GO:0015031 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 Gene3D G3DSA:1.10.3120.10 117 424 3.5E-98 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 Gene3D G3DSA:3.30.70.1050 1 116 6.5E-29 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 SUPERFAMILY SSF109998 250 424 3.92E-46 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily MC28_3765 f3a8045a1c94a86895def1513dbf0a03 425 Gene3D G3DSA:3.10.50.40 151 248 3.5E-98 T 14-10-2018 MC28_5403 262cd6d1113edcc08d035489fb6aba71 390 Gene3D G3DSA:3.20.20.10 19 262 9.1E-48 T 14-10-2018 IPR029066 PLP-binding barrel MC28_5403 262cd6d1113edcc08d035489fb6aba71 390 Pfam PF01168 Alanine racemase, N-terminal domain 17 262 5.6E-9 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 MC28_5403 262cd6d1113edcc08d035489fb6aba71 390 SUPERFAMILY SSF51419 20 265 5.56E-19 T 14-10-2018 IPR029066 PLP-binding barrel MC28_4889 e68e40cfaa69599849eaccd545a5ce9b 313 Pfam PF00005 ABC transporter 2 159 1.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4889 e68e40cfaa69599849eaccd545a5ce9b 313 SUPERFAMILY SSF52540 1 231 9.32E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4889 e68e40cfaa69599849eaccd545a5ce9b 313 SMART SM00382 10 209 3.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4889 e68e40cfaa69599849eaccd545a5ce9b 313 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 211 276 2.2E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_4889 e68e40cfaa69599849eaccd545a5ce9b 313 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4889 e68e40cfaa69599849eaccd545a5ce9b 313 Gene3D G3DSA:3.40.50.300 1 312 6.8E-91 T 14-10-2018 MC28_4889 e68e40cfaa69599849eaccd545a5ce9b 313 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 209 295 1.0E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_3778 41d4be5ca7d6407e202b40c544ffc1ac 220 Pfam PF01965 DJ-1/PfpI family 26 213 3.8E-14 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 MC28_3778 41d4be5ca7d6407e202b40c544ffc1ac 220 SUPERFAMILY SSF52317 1 215 6.52E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_3778 41d4be5ca7d6407e202b40c544ffc1ac 220 Gene3D G3DSA:3.40.50.880 1 219 2.6E-67 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0674 f621e19aa6a9c55a7b3d0a4c886c02ff 261 PIRSF PIRSF031509 20 261 1.6E-74 T 14-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 MC28_0674 f621e19aa6a9c55a7b3d0a4c886c02ff 261 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 146 258 1.2E-34 T 14-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF MC28_2651 c88554a7b90ba73480ae1355f6c2a8d4 314 SUPERFAMILY SSF51695 36 311 1.36E-73 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_2651 c88554a7b90ba73480ae1355f6c2a8d4 314 Gene3D G3DSA:3.20.20.190 23 314 5.5E-128 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_2651 c88554a7b90ba73480ae1355f6c2a8d4 314 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 43 305 7.1E-51 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 MC28_3776 d1c422c7eb32f70b06602d644a1b674f 230 Pfam PF01965 DJ-1/PfpI family 29 214 1.2E-10 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 MC28_3776 d1c422c7eb32f70b06602d644a1b674f 230 Gene3D G3DSA:3.40.50.880 1 229 1.3E-67 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_3776 d1c422c7eb32f70b06602d644a1b674f 230 SUPERFAMILY SSF52317 2 224 4.58E-69 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_1364 b94d9771e6fb628248277e657f0364cf 181 Pfam PF13302 Acetyltransferase (GNAT) domain 8 152 7.1E-25 T 14-10-2018 IPR000182 GNAT domain MC28_1364 b94d9771e6fb628248277e657f0364cf 181 Gene3D G3DSA:3.40.630.30 2 178 2.2E-49 T 14-10-2018 MC28_1364 b94d9771e6fb628248277e657f0364cf 181 SUPERFAMILY SSF55729 2 176 2.21E-44 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3570 9addd5ef3e2d36ecf604307015de1ddc 370 PIRSF PIRSF004640 1 365 1.1E-154 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 MC28_3570 9addd5ef3e2d36ecf604307015de1ddc 370 Gene3D G3DSA:3.20.20.20 1 259 2.0E-110 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3570 9addd5ef3e2d36ecf604307015de1ddc 370 Gene3D G3DSA:3.30.413.10 261 360 4.3E-35 T 14-10-2018 MC28_3570 9addd5ef3e2d36ecf604307015de1ddc 370 SUPERFAMILY SSF56014 263 352 3.11E-14 T 14-10-2018 MC28_3570 9addd5ef3e2d36ecf604307015de1ddc 370 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 2.3E-132 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 MC28_3570 9addd5ef3e2d36ecf604307015de1ddc 370 SUPERFAMILY SSF51717 15 214 2.28E-15 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 MC28_3570 9addd5ef3e2d36ecf604307015de1ddc 370 Pfam PF04551 GcpE protein 10 351 9.2E-141 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 MC28_3570 9addd5ef3e2d36ecf604307015de1ddc 370 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 35.042 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 MC28_4313 f0c596103c8c48ac6f739409868bc768 146 ProSitePatterns PS00819 Dps protein family signature 2. 53 67 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 MC28_4313 f0c596103c8c48ac6f739409868bc768 146 PIRSF PIRSF005900 1 146 1.6E-51 T 14-10-2018 IPR002177 DNA-binding protein Dps MC28_4313 f0c596103c8c48ac6f739409868bc768 146 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 27 43 7.5E-17 T 14-10-2018 IPR002177 DNA-binding protein Dps MC28_4313 f0c596103c8c48ac6f739409868bc768 146 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 7.5E-17 T 14-10-2018 IPR002177 DNA-binding protein Dps MC28_4313 f0c596103c8c48ac6f739409868bc768 146 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 7.5E-17 T 14-10-2018 IPR002177 DNA-binding protein Dps MC28_4313 f0c596103c8c48ac6f739409868bc768 146 ProSitePatterns PS00818 Dps protein family signature 1. 27 43 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 MC28_4313 f0c596103c8c48ac6f739409868bc768 146 Gene3D G3DSA:1.20.1260.10 1 146 8.6E-58 T 14-10-2018 IPR012347 Ferritin-like MC28_4313 f0c596103c8c48ac6f739409868bc768 146 SUPERFAMILY SSF47240 3 144 3.21E-50 T 14-10-2018 IPR009078 Ferritin-like superfamily MC28_4313 f0c596103c8c48ac6f739409868bc768 146 Pfam PF00210 Ferritin-like domain 6 146 2.5E-36 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 MC28_2047 3ff340a1b57d283cb1e29f62d77a3667 253 Gene3D G3DSA:3.40.50.150 38 236 3.2E-33 T 14-10-2018 MC28_2047 3ff340a1b57d283cb1e29f62d77a3667 253 Pfam PF13649 Methyltransferase domain 41 136 3.8E-11 T 14-10-2018 MC28_2047 3ff340a1b57d283cb1e29f62d77a3667 253 Gene3D G3DSA:2.20.25.570 144 209 3.2E-33 T 14-10-2018 MC28_2047 3ff340a1b57d283cb1e29f62d77a3667 253 SUPERFAMILY SSF53335 11 245 1.08E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 Gene3D G3DSA:3.40.50.300 1 203 4.7E-71 T 14-10-2018 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 60.149 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 SUPERFAMILY SSF50447 203 300 1.3E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 3.4E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.6E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 9.2E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 Gene3D G3DSA:2.40.30.10 206 335 1.1E-52 T 14-10-2018 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 SUPERFAMILY SSF52540 6 219 9.26E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 Gene3D G3DSA:2.40.30.10 339 394 9.6E-27 T 14-10-2018 MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 3.7E-32 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 SUPERFAMILY SSF50465 303 395 1.35E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal MC28_4820 1783a9623dddb36694ba8a0db44dcb95 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.4E-230 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 MC28_1240 561cd0c013f021f3182a3990525cb487 482 Gene3D G3DSA:1.10.405.10 120 230 1.3E-94 T 14-10-2018 MC28_1240 561cd0c013f021f3182a3990525cb487 482 Gene3D G3DSA:3.90.660.10 5 420 1.3E-94 T 14-10-2018 MC28_1240 561cd0c013f021f3182a3990525cb487 482 SUPERFAMILY SSF51905 22 481 4.4E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1240 561cd0c013f021f3182a3990525cb487 482 Gene3D G3DSA:3.50.50.60 25 429 1.3E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_1240 561cd0c013f021f3182a3990525cb487 482 Gene3D G3DSA:1.10.10.1620 437 482 7.3E-20 T 14-10-2018 MC28_1240 561cd0c013f021f3182a3990525cb487 482 Pfam PF01593 Flavin containing amine oxidoreductase 33 480 2.0E-75 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 MC28_1240 561cd0c013f021f3182a3990525cb487 482 PRINTS PR00757 Flavin-containing amine oxidase signature 25 44 3.1E-8 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_1240 561cd0c013f021f3182a3990525cb487 482 PRINTS PR00757 Flavin-containing amine oxidase signature 462 479 3.1E-8 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_1240 561cd0c013f021f3182a3990525cb487 482 PRINTS PR00757 Flavin-containing amine oxidase signature 325 344 3.1E-8 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_1240 561cd0c013f021f3182a3990525cb487 482 SUPERFAMILY SSF54373 322 431 1.83E-29 T 14-10-2018 MC28_4495 03e53e1805dec6976ac038a95a701f9e 232 PIRSF PIRSF037382 1 231 8.3E-92 T 14-10-2018 IPR017189 CTP:phosphocholine cytidylyltransferase MC28_4495 03e53e1805dec6976ac038a95a701f9e 232 SUPERFAMILY SSF53448 1 225 1.65E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4495 03e53e1805dec6976ac038a95a701f9e 232 Gene3D G3DSA:3.90.550.10 1 228 9.6E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4495 03e53e1805dec6976ac038a95a701f9e 232 Pfam PF00483 Nucleotidyl transferase 3 113 1.6E-12 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 MC28_5249 184eeaa571a2706ade14ea1b4b6d6432 98 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 16 94 6.5E-31 T 14-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 MC28_5249 184eeaa571a2706ade14ea1b4b6d6432 98 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 23 94 1.3E-27 T 14-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 MC28_2607 9d1cf94860874eac314ddd377f78991b 435 SUPERFAMILY SSF52777 21 155 7.45E-9 T 14-10-2018 MC28_2607 9d1cf94860874eac314ddd377f78991b 435 Gene3D G3DSA:3.30.559.10 11 186 3.2E-8 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 MC28_2607 9d1cf94860874eac314ddd377f78991b 435 Pfam PF00668 Condensation domain 3 318 2.3E-10 T 14-10-2018 IPR001242 Condensation domain MC28_2607 9d1cf94860874eac314ddd377f78991b 435 SUPERFAMILY SSF52777 206 434 7.78E-11 T 14-10-2018 MC28_1186 67b5b14ac550d8ea55530b7a80a7880e 412 SUPERFAMILY SSF56801 95 405 3.79E-59 T 14-10-2018 MC28_1186 67b5b14ac550d8ea55530b7a80a7880e 412 Gene3D G3DSA:3.30.300.30 313 409 9.9E-19 T 14-10-2018 MC28_1186 67b5b14ac550d8ea55530b7a80a7880e 412 Pfam PF00501 AMP-binding enzyme 82 282 5.2E-23 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_1186 67b5b14ac550d8ea55530b7a80a7880e 412 Gene3D G3DSA:3.40.50.12780 1 300 3.8E-33 T 14-10-2018 MC28_1186 67b5b14ac550d8ea55530b7a80a7880e 412 ProSitePatterns PS00455 Putative AMP-binding domain signature. 107 118 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_1186 67b5b14ac550d8ea55530b7a80a7880e 412 Pfam PF13193 AMP-binding enzyme C-terminal domain 328 399 1.1E-10 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_G335 38d7c08e025d39c5936b13d7fb07194f 239 Pfam PF01695 IstB-like ATP binding protein 80 201 2.0E-13 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 MC28_G335 38d7c08e025d39c5936b13d7fb07194f 239 Gene3D G3DSA:3.40.50.300 33 226 2.0E-34 T 14-10-2018 MC28_G335 38d7c08e025d39c5936b13d7fb07194f 239 SUPERFAMILY SSF52540 74 228 2.32E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G335 38d7c08e025d39c5936b13d7fb07194f 239 SMART SM00382 85 223 3.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2339 477c4943043cba564c7aa9132a121b75 353 Gene3D G3DSA:3.30.300.210 199 353 9.8E-23 T 14-10-2018 IPR038501 Spore germination GerAC superfamily MC28_2339 477c4943043cba564c7aa9132a121b75 353 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 182 349 3.4E-26 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_2339 477c4943043cba564c7aa9132a121b75 353 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 1 352 1.1E-54 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_3512 11b9871ced89eb8d503729ffd824b92b 222 Pfam PF13346 ABC-2 family transporter protein 3 217 2.7E-29 T 14-10-2018 IPR025699 ABC-2 membrane transporter-like MC28_4793 90e2f63ec6dfced0d2cb7e92a47806a6 348 ProSitePatterns PS00112 Phosphagen kinase active site signature. 161 167 - T 14-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 MC28_4793 90e2f63ec6dfced0d2cb7e92a47806a6 348 Hamap MF_00602 Protein-arginine kinase [mcsB]. 7 344 38.599 T 14-10-2018 IPR023660 Protein arginine kinase GO:0016775 MC28_4793 90e2f63ec6dfced0d2cb7e92a47806a6 348 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 49 247 8.4E-75 T 14-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 MC28_4793 90e2f63ec6dfced0d2cb7e92a47806a6 348 SUPERFAMILY SSF55931 3 262 5.61E-88 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 MC28_4793 90e2f63ec6dfced0d2cb7e92a47806a6 348 Gene3D G3DSA:3.30.590.10 4 257 1.7E-73 T 14-10-2018 MC28_2280 8ea43fe70673e44ef9958e151466b305 375 SUPERFAMILY SSF53474 100 356 3.52E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2280 8ea43fe70673e44ef9958e151466b305 375 Pfam PF07859 alpha/beta hydrolase fold 126 342 1.6E-51 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 MC28_2280 8ea43fe70673e44ef9958e151466b305 375 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 190 205 - T 14-10-2018 IPR019826 Carboxylesterase type B, active site MC28_2280 8ea43fe70673e44ef9958e151466b305 375 Gene3D G3DSA:3.40.50.1820 4 361 8.5E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2280 8ea43fe70673e44ef9958e151466b305 375 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 197 209 - T 14-10-2018 IPR033140 Lipase, GDXG, putative serine active site MC28_D053 dbc464b7266ed10ac43b489fdcef310a 251 SUPERFAMILY SSF47413 15 82 7.82E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_D053 dbc464b7266ed10ac43b489fdcef310a 251 Gene3D G3DSA:1.10.260.40 12 94 1.2E-8 T 14-10-2018 MC28_2128 96e41e940b8c82f860894deb7f5b7857 215 Pfam PF01965 DJ-1/PfpI family 2 165 2.7E-23 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 MC28_2128 96e41e940b8c82f860894deb7f5b7857 215 SUPERFAMILY SSF52317 1 189 7.72E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_2128 96e41e940b8c82f860894deb7f5b7857 215 Gene3D G3DSA:3.40.50.880 1 215 3.1E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 SUPERFAMILY SSF46785 1 57 3.71E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 1 53 1.5E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 13 27 1.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 43 1.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 SMART SM00345 1 53 1.2E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 SUPERFAMILY SSF48008 74 211 1.44E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 Pfam PF07729 FCD domain 79 204 1.4E-23 T 14-10-2018 IPR011711 GntR, C-terminal MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 Gene3D G3DSA:1.20.120.530 60 212 7.1E-32 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 SMART SM00895 78 205 6.6E-23 T 14-10-2018 IPR011711 GntR, C-terminal MC28_0531 bc6408da8885825a741aa47b7e9a915c 218 Gene3D G3DSA:1.10.10.10 1 59 8.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4281 c2458b7470b6c7b8798d000e8819a643 252 Gene3D G3DSA:1.10.10.10 1 95 4.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4281 c2458b7470b6c7b8798d000e8819a643 252 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 2 70 8.1E-21 T 14-10-2018 IPR002831 Transcription regulator TrmB, N-terminal MC28_4281 c2458b7470b6c7b8798d000e8819a643 252 SUPERFAMILY SSF46785 1 73 4.21E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4281 c2458b7470b6c7b8798d000e8819a643 252 Pfam PF11495 Archaeal transcriptional regulator TrmB 102 222 1.3E-6 T 14-10-2018 IPR021586 Transcription regulator TrmB, C-terminal MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 Pfam PF00204 DNA gyrase B 222 392 1.7E-58 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 Gene3D G3DSA:3.40.50.670 410 642 4.3E-101 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 Gene3D G3DSA:3.30.230.10 221 402 1.9E-73 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 6 638 48.517 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 SMART SM00433 37 633 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 SUPERFAMILY SSF55874 7 219 4.06E-69 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR00418 DNA topoisomerase II family signature 72 85 2.2E-69 T 14-10-2018 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR00418 DNA topoisomerase II family signature 114 128 2.2E-69 T 14-10-2018 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR00418 DNA topoisomerase II family signature 572 588 2.2E-69 T 14-10-2018 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR00418 DNA topoisomerase II family signature 424 438 2.2E-69 T 14-10-2018 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR00418 DNA topoisomerase II family signature 508 525 2.2E-69 T 14-10-2018 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR00418 DNA topoisomerase II family signature 528 540 2.2E-69 T 14-10-2018 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR00418 DNA topoisomerase II family signature 37 52 2.2E-69 T 14-10-2018 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR00418 DNA topoisomerase II family signature 490 506 2.2E-69 T 14-10-2018 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR00418 DNA topoisomerase II family signature 268 281 2.2E-69 T 14-10-2018 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 Gene3D G3DSA:3.30.565.10 5 220 1.2E-86 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 7 642 0.0 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 SMART SM00387 33 177 2.0E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 Pfam PF01751 Toprim domain 423 523 9.3E-16 T 14-10-2018 IPR006171 TOPRIM domain MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 568 629 7.6E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 176 1.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 SUPERFAMILY SSF54211 222 392 8.54E-55 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 474 483 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 609 625 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 376 396 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 593 605 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 8 18 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 362 376 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 221 243 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.9E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MC28_2747 542eaadb96a3206c2634c39a0cabda6d 654 SUPERFAMILY SSF56719 398 633 2.35E-85 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 MC28_5065 d87b8f40e63f76e942c01df4634a2e94 346 Pfam PF01032 FecCD transport family 33 340 2.6E-83 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_5065 d87b8f40e63f76e942c01df4634a2e94 346 SUPERFAMILY SSF81345 17 340 1.31E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_5065 d87b8f40e63f76e942c01df4634a2e94 346 Gene3D G3DSA:1.10.3470.10 19 344 8.7E-85 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_5220 42ceea5b014e2bfe0f6045994e95dd5a 440 SUPERFAMILY SSF55031 231 323 1.44E-10 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_5220 42ceea5b014e2bfe0f6045994e95dd5a 440 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 37 427 8.8E-116 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase MC28_5220 42ceea5b014e2bfe0f6045994e95dd5a 440 Gene3D G3DSA:3.40.630.10 53 436 6.8E-91 T 14-10-2018 MC28_5220 42ceea5b014e2bfe0f6045994e95dd5a 440 Pfam PF07687 Peptidase dimerisation domain 204 325 1.3E-30 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_5220 42ceea5b014e2bfe0f6045994e95dd5a 440 Pfam PF01546 Peptidase family M20/M25/M40 102 433 2.4E-27 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_5220 42ceea5b014e2bfe0f6045994e95dd5a 440 Gene3D G3DSA:3.30.70.360 207 349 6.8E-91 T 14-10-2018 MC28_5220 42ceea5b014e2bfe0f6045994e95dd5a 440 SUPERFAMILY SSF53187 22 436 1.6E-58 T 14-10-2018 MC28_1952 ccc9d913ac9af2b53ae46acd8a4169f3 209 TIGRFAM TIGR03035 trp_arylform: arylformamidase 5 209 2.8E-98 T 14-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 MC28_1952 ccc9d913ac9af2b53ae46acd8a4169f3 209 Pfam PF04199 Putative cyclase 7 152 1.9E-21 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 MC28_1952 ccc9d913ac9af2b53ae46acd8a4169f3 209 Hamap MF_01969 Kynurenine formamidase [kynB]. 5 209 43.027 T 14-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 MC28_1952 ccc9d913ac9af2b53ae46acd8a4169f3 209 SUPERFAMILY SSF102198 3 206 1.96E-60 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 MC28_1952 ccc9d913ac9af2b53ae46acd8a4169f3 209 Gene3D G3DSA:3.50.30.50 1 209 1.4E-82 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 MC28_4687 b22ad92d1c825dc5a94fbd162ab5f12b 359 Pfam PF01757 Acyltransferase family 21 342 5.2E-39 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 MC28_0406 8a9f19729bde84101cd14efc959dc294 168 SUPERFAMILY SSF55486 45 167 2.27E-16 T 14-10-2018 MC28_0406 8a9f19729bde84101cd14efc959dc294 168 PRINTS PR00138 Matrixin signature 155 168 2.0E-5 T 14-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 MC28_0406 8a9f19729bde84101cd14efc959dc294 168 PRINTS PR00138 Matrixin signature 123 148 2.0E-5 T 14-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 MC28_0406 8a9f19729bde84101cd14efc959dc294 168 Pfam PF00413 Matrixin 115 167 3.0E-9 T 14-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 MC28_0406 8a9f19729bde84101cd14efc959dc294 168 Gene3D G3DSA:3.40.390.10 39 168 4.8E-14 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 MC28_5418 0169767257c7e8f019a6efb56597a9ca 515 SUPERFAMILY SSF52317 40 334 1.46E-10 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_5418 0169767257c7e8f019a6efb56597a9ca 515 Gene3D G3DSA:3.40.50.880 36 212 2.8E-6 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0882 fb0cfa1b39cf2e3767c10ee7d6a39004 154 Gene3D G3DSA:1.20.120.490 29 153 2.4E-25 T 14-10-2018 IPR024042 TM1646-like domain superfamily MC28_0882 fb0cfa1b39cf2e3767c10ee7d6a39004 154 SUPERFAMILY SSF158397 36 153 8.5E-26 T 14-10-2018 IPR024042 TM1646-like domain superfamily MC28_0882 fb0cfa1b39cf2e3767c10ee7d6a39004 154 Pfam PF03885 Protein of unknown function (DUF327) 26 153 1.3E-24 T 14-10-2018 IPR005585 Protein of unknown function DUF327 MC28_4930 3654f686b6725af73462561bb1e67385 319 Gene3D G3DSA:3.90.850.10 26 302 5.9E-88 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 MC28_4930 3654f686b6725af73462561bb1e67385 319 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 299 4.6E-64 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 MC28_4930 3654f686b6725af73462561bb1e67385 319 SUPERFAMILY SSF56529 77 299 2.88E-70 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 MC28_2730 bb806aa30cdf3754de2df7d0754296a6 690 SUPERFAMILY SSF53300 25 169 7.41E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily MC28_2730 bb806aa30cdf3754de2df7d0754296a6 690 Gene3D G3DSA:3.40.50.410 23 192 2.4E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily MC28_3027 d18ad27f032f283025e66a32b3eaa1f5 296 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 286 1.0E-10 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MC28_3027 d18ad27f032f283025e66a32b3eaa1f5 296 Gene3D G3DSA:3.40.50.720 122 268 5.0E-104 T 14-10-2018 MC28_3027 d18ad27f032f283025e66a32b3eaa1f5 296 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 1 286 1.5E-146 T 14-10-2018 IPR014215 Dipicolinic acid synthetase subunit A MC28_3027 d18ad27f032f283025e66a32b3eaa1f5 296 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 2 119 4.0E-29 T 14-10-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal MC28_3027 d18ad27f032f283025e66a32b3eaa1f5 296 Gene3D G3DSA:3.40.50.720 3 284 5.0E-104 T 14-10-2018 MC28_3027 d18ad27f032f283025e66a32b3eaa1f5 296 SUPERFAMILY SSF51735 127 265 1.58E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0761 ec9078432e9c401e1adc2b3a62b751e2 262 Pfam PF09577 Sporulation protein YpjB (SpoYpjB) 25 254 3.0E-87 T 14-10-2018 IPR014231 Sporulation protein YpjB MC28_0761 ec9078432e9c401e1adc2b3a62b751e2 262 TIGRFAM TIGR02878 spore_ypjB: sporulation protein YpjB 24 256 1.6E-105 T 14-10-2018 IPR014231 Sporulation protein YpjB MC28_0156 7318023ffb13fe7d9aa613aa2afe1805 317 SUPERFAMILY SSF53335 157 255 2.41E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0156 7318023ffb13fe7d9aa613aa2afe1805 317 Gene3D G3DSA:3.40.50.150 154 317 3.8E-21 T 14-10-2018 MC28_0156 7318023ffb13fe7d9aa613aa2afe1805 317 Pfam PF01170 Putative RNA methylase family UPF0020 158 263 2.4E-7 T 14-10-2018 IPR000241 Putative RNA methylase domain MC28_F069 1ccb550363a1154adb6d1bc1d6b58a6a 656 SUPERFAMILY SSF52540 1 441 4.18E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F069 1ccb550363a1154adb6d1bc1d6b58a6a 656 Pfam PF13175 AAA ATPase domain 1 420 4.3E-22 T 14-10-2018 MC28_3301 19e8434960306746f2d2ea639719100d 280 Gene3D G3DSA:1.10.3720.10 1 267 6.0E-66 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3301 19e8434960306746f2d2ea639719100d 280 SUPERFAMILY SSF161098 6 280 1.96E-69 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3301 19e8434960306746f2d2ea639719100d 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 272 5.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 Gene3D G3DSA:3.40.1190.20 4 296 5.7E-91 T 14-10-2018 IPR029056 Ribokinase-like MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 Pfam PF00294 pfkB family carbohydrate kinase 4 289 2.8E-69 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 294 1.9E-100 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 Hamap MF_01987 Ribokinase [rbsK]. 5 296 24.718 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 PRINTS PR00990 Ribokinase signature 36 55 9.4E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 PRINTS PR00990 Ribokinase signature 9 30 9.4E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 PRINTS PR00990 Ribokinase signature 212 223 9.4E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 PRINTS PR00990 Ribokinase signature 175 190 9.4E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 PRINTS PR00990 Ribokinase signature 107 120 9.4E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 SUPERFAMILY SSF53613 7 295 3.12E-77 T 14-10-2018 IPR029056 Ribokinase-like MC28_5388 43bbab322546c54f2c53f8b2c4304566 301 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 241 254 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 MC28_D077 0a3f3c56aa90ce204b4d60295d2234ee 126 ProDom PD294982 PLASMID REPLICATION-ASSOCIATED PXO2-40/BXB0041/GBAA_PXO2_0041 1 110 4.0E-43 T 14-10-2018 IPR020333 Uncharacterised protein family, plasmid pXO2-40 MC28_4465 3853a4c4f960125126964fa501a63cbe 121 Pfam PF06803 Protein of unknown function (DUF1232) 45 80 1.1E-13 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 MC28_4465 3853a4c4f960125126964fa501a63cbe 121 PIRSF PIRSF031804 1 110 2.6E-42 T 14-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 MC28_1915 f189feb1472917997bcc82612fb29a4a 174 Gene3D G3DSA:3.40.1350.140 13 171 1.5E-56 T 14-10-2018 IPR038231 MepB-like superfamily MC28_1915 f189feb1472917997bcc82612fb29a4a 174 Pfam PF08877 MepB protein 36 157 3.1E-49 T 14-10-2018 IPR011235 MepB-like MC28_1915 f189feb1472917997bcc82612fb29a4a 174 PIRSF PIRSF032285 9 174 8.4E-69 T 14-10-2018 IPR011235 MepB-like MC28_1338 4b79a32cd40a099b6f83c4a123de57b5 320 PIRSF PIRSF002849 2 315 8.7E-135 T 14-10-2018 MC28_1338 4b79a32cd40a099b6f83c4a123de57b5 320 SUPERFAMILY SSF52540 8 285 8.9E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1338 4b79a32cd40a099b6f83c4a123de57b5 320 Gene3D G3DSA:1.10.8.300 202 310 1.4E-37 T 14-10-2018 MC28_1338 4b79a32cd40a099b6f83c4a123de57b5 320 Gene3D G3DSA:3.40.50.300 22 188 6.8E-45 T 14-10-2018 MC28_1338 4b79a32cd40a099b6f83c4a123de57b5 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 41 171 3.0E-64 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 Gene3D G3DSA:3.30.70.141 1 148 1.6E-64 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 SUPERFAMILY SSF54919 1 148 1.83E-60 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 2.6E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 2.6E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 2.6E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 2.6E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 2.6E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 36.397 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 Pfam PF00334 Nucleoside diphosphate kinase 2 135 8.9E-58 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0749 a0930527c2ebce581b4cc6a0bd14ca64 148 SMART SM00562 1 138 1.1E-88 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_3101 40dccf6ac8a5bbdfa6df5dc354af7203 127 Pfam PF14037 YoqO-like protein 9 123 2.6E-49 T 14-10-2018 IPR025621 YoqO-like protein MC28_0825 990385851676ee1df6d271f569ed3cdc 157 Gene3D G3DSA:3.40.630.30 5 157 2.7E-47 T 14-10-2018 MC28_0825 990385851676ee1df6d271f569ed3cdc 157 Pfam PF00583 Acetyltransferase (GNAT) family 37 121 1.7E-14 T 14-10-2018 IPR000182 GNAT domain MC28_0825 990385851676ee1df6d271f569ed3cdc 157 SUPERFAMILY SSF55729 22 156 1.86E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_D185 bc7d0bf617b74a7db9cfa4d18718a774 482 Pfam PF01609 Transposase DDE domain 123 389 9.2E-58 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_D185 bc7d0bf617b74a7db9cfa4d18718a774 482 SUPERFAMILY SSF53098 9 479 4.93E-81 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 Gene3D G3DSA:3.10.50.30 104 182 6.8E-26 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 32 182 4.3E-58 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 Hamap MF_00105 Transcription elongation factor GreA [greA]. 29 182 32.593 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 SUPERFAMILY SSF54534 108 181 1.96E-21 T 14-10-2018 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 SUPERFAMILY SSF46557 29 103 2.09E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 PIRSF PIRSF006092 25 182 1.1E-52 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 44 75 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 109 182 7.4E-27 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 Gene3D G3DSA:1.10.287.180 28 102 1.6E-31 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 Pfam PF03449 Transcription elongation factor, N-terminal 32 101 6.5E-32 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 MC28_3670 10a0c4d545a03b5b6ecaf4e060031b10 182 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 147 163 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 MC28_4589 86f39b526cbec6c1a3f07040f52250aa 376 Gene3D G3DSA:3.30.565.10 242 365 5.6E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4589 86f39b526cbec6c1a3f07040f52250aa 376 SUPERFAMILY SSF55874 245 364 4.19E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4589 86f39b526cbec6c1a3f07040f52250aa 376 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 282 328 8.7E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4589 86f39b526cbec6c1a3f07040f52250aa 376 Pfam PF07730 Histidine kinase 178 241 2.0E-19 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MC28_4579 daceea98b2af5fc0f0a80e83a85e705c 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 7.0E-36 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 MC28_4579 daceea98b2af5fc0f0a80e83a85e705c 283 Gene3D G3DSA:1.10.1040.10 193 278 8.3E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_4579 daceea98b2af5fc0f0a80e83a85e705c 283 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 MC28_4579 daceea98b2af5fc0f0a80e83a85e705c 283 Gene3D G3DSA:3.40.50.720 1 188 1.5E-74 T 14-10-2018 MC28_4579 daceea98b2af5fc0f0a80e83a85e705c 283 SUPERFAMILY SSF51735 2 185 8.7E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4579 daceea98b2af5fc0f0a80e83a85e705c 283 SUPERFAMILY SSF48179 185 283 1.11E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_4579 daceea98b2af5fc0f0a80e83a85e705c 283 PIRSF PIRSF000105 1 283 4.7E-96 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 MC28_4579 daceea98b2af5fc0f0a80e83a85e705c 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 2.0E-68 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 MC28_4094 a6d6741ff8266e55cd5006473cc3562b 662 Pfam PF07670 Nucleoside recognition 508 631 9.6E-34 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 MC28_4094 a6d6741ff8266e55cd5006473cc3562b 662 Pfam PF07670 Nucleoside recognition 347 440 1.4E-15 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 MC28_4094 a6d6741ff8266e55cd5006473cc3562b 662 Pfam PF02421 Ferrous iron transport protein B 3 153 6.1E-59 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 MC28_4094 a6d6741ff8266e55cd5006473cc3562b 662 Gene3D G3DSA:3.40.50.300 1 170 5.9E-41 T 14-10-2018 MC28_4094 a6d6741ff8266e55cd5006473cc3562b 662 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 8 628 1.2E-194 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 MC28_4094 a6d6741ff8266e55cd5006473cc3562b 662 SUPERFAMILY SSF52540 3 163 2.67E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4094 a6d6741ff8266e55cd5006473cc3562b 662 Pfam PF07664 Ferrous iron transport protein B C terminus 451 503 1.8E-18 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 MC28_4094 a6d6741ff8266e55cd5006473cc3562b 662 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 50 65 5.5E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_4094 a6d6741ff8266e55cd5006473cc3562b 662 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 5.5E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 MC28_D045 13d5e828a1582655277b8824cc5d29f1 341 SUPERFAMILY SSF57783 10 92 2.89E-12 T 14-10-2018 MC28_D045 13d5e828a1582655277b8824cc5d29f1 341 Pfam PF13155 Toprim-like 215 318 9.2E-13 T 14-10-2018 MC28_D045 13d5e828a1582655277b8824cc5d29f1 341 Pfam PF13154 Protein of unknown function (DUF3991) 128 186 2.9E-14 T 14-10-2018 IPR025054 Domain of unknown function DUF3991 MC28_C063 b3bc1ec2c55bb1ecd1ad4a6e2a4172ce 216 SMART SM00857 8 156 1.1E-31 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_C063 b3bc1ec2c55bb1ecd1ad4a6e2a4172ce 216 Gene3D G3DSA:3.40.50.1390 6 139 7.9E-31 T 14-10-2018 MC28_C063 b3bc1ec2c55bb1ecd1ad4a6e2a4172ce 216 ProSitePatterns PS00398 Site-specific recombinases signature 2. 63 75 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_C063 b3bc1ec2c55bb1ecd1ad4a6e2a4172ce 216 ProSitePatterns PS00397 Site-specific recombinases active site. 11 19 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_C063 b3bc1ec2c55bb1ecd1ad4a6e2a4172ce 216 Pfam PF00239 Resolvase, N terminal domain 9 156 1.6E-27 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_C063 b3bc1ec2c55bb1ecd1ad4a6e2a4172ce 216 SUPERFAMILY SSF53041 7 156 5.1E-32 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_0441 053ddc5e981166b36a23bec767b95eaa 286 Gene3D G3DSA:3.40.50.720 7 270 7.0E-114 T 14-10-2018 MC28_0441 053ddc5e981166b36a23bec767b95eaa 286 Pfam PF04321 RmlD substrate binding domain 6 282 1.2E-99 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 MC28_0441 053ddc5e981166b36a23bec767b95eaa 286 SUPERFAMILY SSF51735 6 280 7.77E-90 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0441 053ddc5e981166b36a23bec767b95eaa 286 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 6 280 2.0E-99 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 MC28_0441 053ddc5e981166b36a23bec767b95eaa 286 Gene3D G3DSA:3.90.25.10 163 276 7.0E-114 T 14-10-2018 MC28_G130 53a3fd8a444bb16fddb948b6c97bad15 288 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 195 267 2.0E-15 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_G130 53a3fd8a444bb16fddb948b6c97bad15 288 Pfam PF01385 Probable transposase 117 226 1.8E-25 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 MC28_G130 53a3fd8a444bb16fddb948b6c97bad15 288 Pfam PF07282 Putative transposase DNA-binding domain 240 283 4.1E-13 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_4845 655b431335a7bd76b1d6c7d3440f8898 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 9.9E-29 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 MC28_4845 655b431335a7bd76b1d6c7d3440f8898 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.88 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 MC28_4845 655b431335a7bd76b1d6c7d3440f8898 72 Gene3D G3DSA:2.40.50.140 1 72 6.1E-38 T 14-10-2018 MC28_4845 655b431335a7bd76b1d6c7d3440f8898 72 SMART SM00316 4 72 6.8E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 MC28_4845 655b431335a7bd76b1d6c7d3440f8898 72 SUPERFAMILY SSF50249 1 71 7.89E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4845 655b431335a7bd76b1d6c7d3440f8898 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 4.4E-39 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 MC28_1597 f02d47862787781139d8da94a83ecbaa 333 Gene3D G3DSA:1.10.3720.10 69 298 1.2E-18 T 14-10-2018 IPR035906 MetI-like superfamily MC28_1597 f02d47862787781139d8da94a83ecbaa 333 SUPERFAMILY SSF161098 75 283 5.76E-15 T 14-10-2018 IPR035906 MetI-like superfamily MC28_1597 f02d47862787781139d8da94a83ecbaa 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 297 8.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_2012 f3d9eae2b894094d2cf3cfcd54cbd26d 312 Gene3D G3DSA:3.90.1640.10 4 191 3.0E-83 T 14-10-2018 MC28_2012 f3d9eae2b894094d2cf3cfcd54cbd26d 312 Pfam PF01368 DHH family 6 149 5.8E-32 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 MC28_2012 f3d9eae2b894094d2cf3cfcd54cbd26d 312 Pfam PF02833 DHHA2 domain 186 309 9.2E-22 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 MC28_2012 f3d9eae2b894094d2cf3cfcd54cbd26d 312 Gene3D G3DSA:3.10.310.20 193 312 1.3E-37 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 MC28_2012 f3d9eae2b894094d2cf3cfcd54cbd26d 312 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 6 312 46.547 T 14-10-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 MC28_2012 f3d9eae2b894094d2cf3cfcd54cbd26d 312 SUPERFAMILY SSF64182 4 310 8.76E-88 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily MC28_2012 f3d9eae2b894094d2cf3cfcd54cbd26d 312 SMART SM01131 184 310 2.4E-53 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 375 394 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 242 263 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 191 210 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 312 333 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 303 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 90 114 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 132 144 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 16 41 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 63 86 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 180 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 425 446 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 365 7.0E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 SUPERFAMILY SSF81442 13 521 2.35E-181 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 244 298 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 17 519 1.2E-206 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 25 468 7.2E-148 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_3228 ece7cb54870356caa18d1f90821f935c 620 Gene3D G3DSA:1.20.210.10 2 527 2.8E-207 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_0897 1850f438796af7b7e3a76fd33b6f03cd 375 Gene3D G3DSA:3.30.750.140 241 356 3.3E-9 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily MC28_0897 1850f438796af7b7e3a76fd33b6f03cd 375 Pfam PF02120 Flagellar hook-length control protein FliK 271 341 1.3E-7 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal MC28_1037 9a45e541e613902f95f7105e5f6cf6fc 367 SMART SM00854 57 297 9.0E-86 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA MC28_1037 9a45e541e613902f95f7105e5f6cf6fc 367 SUPERFAMILY SSF56300 56 327 5.31E-45 T 14-10-2018 MC28_1037 9a45e541e613902f95f7105e5f6cf6fc 367 Gene3D G3DSA:3.60.21.10 111 353 1.7E-14 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_1037 9a45e541e613902f95f7105e5f6cf6fc 367 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 57 296 1.9E-70 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA MC28_2717 6bb90b8ad1e24f6de40c97aec973b894 267 Pfam PF01226 Formate/nitrite transporter 16 256 1.1E-71 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 MC28_2717 6bb90b8ad1e24f6de40c97aec973b894 267 Gene3D G3DSA:1.20.1080.10 12 267 3.5E-76 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_2717 6bb90b8ad1e24f6de40c97aec973b894 267 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site MC28_2717 6bb90b8ad1e24f6de40c97aec973b894 267 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 169 179 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 Gene3D G3DSA:3.40.50.300 2 79 1.1E-14 T 14-10-2018 MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 SMART SM00382 312 473 4.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 SMART SM00382 28 177 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 Gene3D G3DSA:3.40.50.300 80 221 1.4E-32 T 14-10-2018 MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 Pfam PF12848 ABC transporter 164 268 2.8E-7 T 14-10-2018 IPR032781 ABC-transporter extension domain MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 Gene3D G3DSA:3.40.50.300 249 506 1.3E-54 T 14-10-2018 MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 SUPERFAMILY SSF52540 4 197 8.89E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 Pfam PF00005 ABC transporter 304 428 6.1E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 Pfam PF00005 ABC transporter 23 125 2.7E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4411 45371fb167bfef639adf425b6c1f3f2a 544 SUPERFAMILY SSF52540 274 484 1.88E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1005 6d0c19336437626fc6d706ef66b006d4 145 Gene3D G3DSA:3.90.79.10 1 136 1.4E-30 T 14-10-2018 MC28_1005 6d0c19336437626fc6d706ef66b006d4 145 SUPERFAMILY SSF55811 4 123 7.58E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_1005 6d0c19336437626fc6d706ef66b006d4 145 Pfam PF00293 NUDIX domain 4 113 7.6E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_1005 6d0c19336437626fc6d706ef66b006d4 145 ProSitePatterns PS00893 Nudix box signature. 27 48 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_4599 0f40209117eb010056bf9cc3c39ae703 151 SUPERFAMILY SSF50814 13 149 1.71E-37 T 14-10-2018 IPR012674 Calycin MC28_4599 0f40209117eb010056bf9cc3c39ae703 151 Gene3D G3DSA:2.40.128.20 6 151 1.0E-41 T 14-10-2018 IPR012674 Calycin MC28_4599 0f40209117eb010056bf9cc3c39ae703 151 Pfam PF09148 Domain of unknown function (DUF1934) 19 145 8.2E-29 T 14-10-2018 IPR015231 Protein of unknown function DUF1934 MC28_1124 e727816e9a302192d3265fa913ec2c0b 289 SUPERFAMILY SSF53850 92 288 8.81E-36 T 14-10-2018 MC28_1124 e727816e9a302192d3265fa913ec2c0b 289 Gene3D G3DSA:3.40.190.290 93 287 6.9E-41 T 14-10-2018 MC28_1124 e727816e9a302192d3265fa913ec2c0b 289 Gene3D G3DSA:1.10.10.10 1 92 9.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1124 e727816e9a302192d3265fa913ec2c0b 289 Pfam PF03466 LysR substrate binding domain 89 286 4.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_1124 e727816e9a302192d3265fa913ec2c0b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1124 e727816e9a302192d3265fa913ec2c0b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1124 e727816e9a302192d3265fa913ec2c0b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1124 e727816e9a302192d3265fa913ec2c0b 289 SUPERFAMILY SSF46785 1 111 1.67E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1124 e727816e9a302192d3265fa913ec2c0b 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1731 8fcd7b8fbcfa9dec52842538009dfabd 78 Pfam PF00364 Biotin-requiring enzyme 18 77 2.6E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment MC28_1731 8fcd7b8fbcfa9dec52842538009dfabd 78 SUPERFAMILY SSF51230 8 78 4.19E-22 T 14-10-2018 IPR011053 Single hybrid motif MC28_1731 8fcd7b8fbcfa9dec52842538009dfabd 78 Gene3D G3DSA:2.40.50.100 11 78 4.6E-25 T 14-10-2018 MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 Gene3D G3DSA:3.20.80.10 137 295 1.8E-41 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 SUPERFAMILY SSF55136 135 294 2.27E-36 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 SMART SM00871 136 294 7.3E-38 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 SUPERFAMILY SSF46689 12 62 5.24E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 Pfam PF06445 GyrI-like small molecule binding domain 137 293 3.4E-34 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 2.3E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 2.3E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 SMART SM00342 28 112 2.7E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 65 108 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 Gene3D G3DSA:1.10.10.60 62 118 4.3E-18 T 14-10-2018 MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 Pfam PF12833 Helix-turn-helix domain 34 113 4.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 SUPERFAMILY SSF46689 65 113 2.51E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_2233 8f9242b2ccc6cbc300fbfe02d904093c 296 Gene3D G3DSA:1.10.10.60 3 61 1.4E-14 T 14-10-2018 MC28_4500 3602cbe481e354ba5afa22567d99c5ed 317 Gene3D G3DSA:1.10.260.150 55 317 7.2E-93 T 14-10-2018 MC28_4500 3602cbe481e354ba5afa22567d99c5ed 317 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 90 234 1.7E-52 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_4500 3602cbe481e354ba5afa22567d99c5ed 317 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 91 232 1.0E-49 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_4500 3602cbe481e354ba5afa22567d99c5ed 317 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 15 315 48.704 T 14-10-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU MC28_F080 19165c4e38774e9c6e22ccd8d5e50749 112 Pfam PF12844 Helix-turn-helix domain 6 58 2.4E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F080 19165c4e38774e9c6e22ccd8d5e50749 112 SMART SM00530 8 64 1.2E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F080 19165c4e38774e9c6e22ccd8d5e50749 112 Gene3D G3DSA:1.10.260.40 2 91 1.3E-12 T 14-10-2018 MC28_F080 19165c4e38774e9c6e22ccd8d5e50749 112 SUPERFAMILY SSF47413 3 59 7.24E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2803 7828801f1c446e9e1a374894c9c3395d 143 Pfam PF11084 Protein of unknown function (DUF2621) 3 141 8.3E-76 T 14-10-2018 IPR020203 Uncharacterised protein family, YneK MC28_2803 7828801f1c446e9e1a374894c9c3395d 143 ProDom PD086666 YNEK BH2332 11 143 5.0E-63 T 14-10-2018 IPR020203 Uncharacterised protein family, YneK MC28_F018 63f965794b1b8af35f164195bde47338 858 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 113 388 1.5E-16 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 MC28_F018 63f965794b1b8af35f164195bde47338 858 Gene3D G3DSA:3.40.50.300 448 664 5.7E-31 T 14-10-2018 MC28_F018 63f965794b1b8af35f164195bde47338 858 Pfam PF12696 TraM recognition site of TraD and TraG 525 641 4.3E-29 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site MC28_F018 63f965794b1b8af35f164195bde47338 858 SUPERFAMILY SSF52540 147 646 1.65E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4839 3149f812515dc415e17f9e6c3d36ddcc 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.7E-31 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 MC28_4839 3149f812515dc415e17f9e6c3d36ddcc 166 SUPERFAMILY SSF54211 80 159 3.79E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_4839 3149f812515dc415e17f9e6c3d36ddcc 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 163 7.8E-73 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 MC28_4839 3149f812515dc415e17f9e6c3d36ddcc 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site MC28_4839 3149f812515dc415e17f9e6c3d36ddcc 166 Gene3D G3DSA:3.30.230.10 74 166 2.3E-37 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_4839 3149f812515dc415e17f9e6c3d36ddcc 166 SUPERFAMILY SSF54768 9 76 1.36E-25 T 14-10-2018 MC28_4839 3149f812515dc415e17f9e6c3d36ddcc 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 37.021 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 MC28_4839 3149f812515dc415e17f9e6c3d36ddcc 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 4.2E-33 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 MC28_4839 3149f812515dc415e17f9e6c3d36ddcc 166 Gene3D G3DSA:3.30.160.20 1 73 6.4E-36 T 14-10-2018 MC28_C036 2d9b17ac928cb4f64c7f2e115a287df7 183 Pfam PF12648 TcpE family 24 116 7.5E-11 T 14-10-2018 IPR025608 TcpE family MC28_0634 90f8bb34b8869859085bee69d192debb 566 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 539 7.4E-49 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 MC28_0634 90f8bb34b8869859085bee69d192debb 566 Gene3D G3DSA:3.40.50.970 361 539 6.4E-123 T 14-10-2018 MC28_0634 90f8bb34b8869859085bee69d192debb 566 SUPERFAMILY SSF52467 191 360 9.27E-57 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_0634 90f8bb34b8869859085bee69d192debb 566 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 333 1.3E-40 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 MC28_0634 90f8bb34b8869859085bee69d192debb 566 SUPERFAMILY SSF52518 4 187 2.11E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_0634 90f8bb34b8869859085bee69d192debb 566 Gene3D G3DSA:3.40.50.1220 200 360 6.4E-123 T 14-10-2018 MC28_0634 90f8bb34b8869859085bee69d192debb 566 SUPERFAMILY SSF52518 368 561 1.09E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_0634 90f8bb34b8869859085bee69d192debb 566 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 173 3.6E-58 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 MC28_0634 90f8bb34b8869859085bee69d192debb 566 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 428 447 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 MC28_0634 90f8bb34b8869859085bee69d192debb 566 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 561 3.0E-253 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 MC28_0634 90f8bb34b8869859085bee69d192debb 566 Gene3D G3DSA:3.40.50.970 1 184 7.3E-71 T 14-10-2018 MC28_4466 0c76d5467a8dde5719c9defa7e412313 642 SUPERFAMILY SSF53649 246 619 6.17E-72 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_4466 0c76d5467a8dde5719c9defa7e412313 642 PIRSF PIRSF005091 1 623 3.0E-176 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like MC28_4466 0c76d5467a8dde5719c9defa7e412313 642 Gene3D G3DSA:3.40.720.10 241 548 6.1E-76 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_4466 0c76d5467a8dde5719c9defa7e412313 642 Pfam PF00884 Sulfatase 248 538 9.4E-38 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 Gene3D G3DSA:3.90.780.10 427 608 4.0E-53 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 Pfam PF00746 LPXTG cell wall anchor motif 719 753 1.2E-5 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 SUPERFAMILY SSF56300 36 379 1.01E-79 T 14-10-2018 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 SUPERFAMILY SSF55816 371 609 4.58E-41 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 Pfam PF00149 Calcineurin-like phosphoesterase 40 288 3.0E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 722 752 4.4E-6 T 14-10-2018 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 Pfam PF02872 5'-nucleotidase, C-terminal domain 371 565 1.3E-21 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 PRINTS PR01607 Apyrase family signature 271 294 2.2E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 PRINTS PR01607 Apyrase family signature 243 260 2.2E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 PRINTS PR01607 Apyrase family signature 445 468 2.2E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 PRINTS PR01607 Apyrase family signature 297 317 2.2E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 PRINTS PR01607 Apyrase family signature 38 56 2.2E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 PRINTS PR01607 Apyrase family signature 546 565 2.2E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 ProSitePatterns PS00786 5'-nucleotidase signature 2. 131 142 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 MC28_3415 4388b1f05ea6717efac7d22a3b6ca517 755 Gene3D G3DSA:3.60.21.10 32 369 7.8E-117 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_1493 06f31828a03b5681a6c9ea197dcaef13 37 Gene3D G3DSA:1.10.260.40 1 34 1.4E-5 T 14-10-2018 MC28_1493 06f31828a03b5681a6c9ea197dcaef13 37 SUPERFAMILY SSF47413 2 32 1.72E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_4963 5f70776ee2c16a54b905066383e29455 468 Pfam PF01580 FtsK/SpoIIIE family 215 390 2.0E-13 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MC28_4963 5f70776ee2c16a54b905066383e29455 468 Gene3D G3DSA:3.40.50.300 203 467 6.2E-44 T 14-10-2018 MC28_4963 5f70776ee2c16a54b905066383e29455 468 SUPERFAMILY SSF52540 221 443 4.93E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_E155 6e8eab14c22c940346914f7e9c0f2a45 216 Pfam PF00239 Resolvase, N terminal domain 9 156 3.0E-30 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_E155 6e8eab14c22c940346914f7e9c0f2a45 216 ProSitePatterns PS00398 Site-specific recombinases signature 2. 63 75 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_E155 6e8eab14c22c940346914f7e9c0f2a45 216 ProSitePatterns PS00397 Site-specific recombinases active site. 11 19 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MC28_E155 6e8eab14c22c940346914f7e9c0f2a45 216 Gene3D G3DSA:3.40.50.1390 9 157 4.7E-33 T 14-10-2018 MC28_E155 6e8eab14c22c940346914f7e9c0f2a45 216 SMART SM00857 8 156 4.0E-37 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_E155 6e8eab14c22c940346914f7e9c0f2a45 216 SUPERFAMILY SSF53041 7 156 2.49E-34 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_5224 b7afbf692cb3614c75f1c1ccf36f8b46 309 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 309 2.8E-125 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 MC28_5224 b7afbf692cb3614c75f1c1ccf36f8b46 309 SUPERFAMILY SSF56601 6 309 1.59E-113 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_5224 b7afbf692cb3614c75f1c1ccf36f8b46 309 Gene3D G3DSA:3.40.710.10 3 309 2.5E-111 T 14-10-2018 MC28_5224 b7afbf692cb3614c75f1c1ccf36f8b46 309 Hamap MF_00313 Glutaminase [glsA]. 5 309 47.203 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 MC28_5224 b7afbf692cb3614c75f1c1ccf36f8b46 309 Pfam PF04960 Glutaminase 23 309 3.8E-112 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 MC28_3714 8820488635783be995e70147d477ece5 314 SUPERFAMILY SSF53807 38 307 8.24E-59 T 14-10-2018 MC28_3714 8820488635783be995e70147d477ece5 314 Gene3D G3DSA:3.40.50.1980 35 158 2.1E-29 T 14-10-2018 MC28_3714 8820488635783be995e70147d477ece5 314 Gene3D G3DSA:3.40.50.1980 160 314 1.2E-33 T 14-10-2018 MC28_3714 8820488635783be995e70147d477ece5 314 Pfam PF01497 Periplasmic binding protein 93 283 2.8E-30 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_4557 b93254b36f362fecc82627403627513c 165 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 16 139 7.1E-54 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 MC28_4557 b93254b36f362fecc82627403627513c 165 Gene3D G3DSA:2.70.70.10 7 164 3.2E-60 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_4557 b93254b36f362fecc82627403627513c 165 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 17 137 2.2E-48 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 MC28_4557 b93254b36f362fecc82627403627513c 165 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 79 91 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 MC28_4557 b93254b36f362fecc82627403627513c 165 SUPERFAMILY SSF51261 8 153 3.66E-57 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0931 effbabf830beb67f54eecb7ede100783 330 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0931 effbabf830beb67f54eecb7ede100783 330 Gene3D G3DSA:3.40.50.300 3 285 4.9E-70 T 14-10-2018 MC28_0931 effbabf830beb67f54eecb7ede100783 330 SUPERFAMILY SSF50331 249 318 1.53E-6 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal MC28_0931 effbabf830beb67f54eecb7ede100783 330 SMART SM00382 27 215 3.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0931 effbabf830beb67f54eecb7ede100783 330 Pfam PF00005 ABC transporter 18 165 4.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0931 effbabf830beb67f54eecb7ede100783 330 SUPERFAMILY SSF52540 3 245 8.15E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0931 effbabf830beb67f54eecb7ede100783 330 Pfam PF08402 TOBE domain 250 311 1.4E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 MC28_F259 0f988861ab1d8cab0d10d81d331b32a4 138 SUPERFAMILY SSF50800 5 134 5.23E-42 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily MC28_F259 0f988861ab1d8cab0d10d81d331b32a4 138 Pfam PF03473 MOSC domain 4 81 8.5E-13 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 MC28_F259 0f988861ab1d8cab0d10d81d331b32a4 138 Pfam PF03475 3-alpha domain 93 133 1.1E-10 T 14-10-2018 IPR005163 3-alpha domain MC28_F259 0f988861ab1d8cab0d10d81d331b32a4 138 Gene3D G3DSA:2.40.33.20 2 135 1.7E-42 T 14-10-2018 MC28_0921 df25056b3653467c58b67fec50a5e20c 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 100 3.9E-24 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 Gene3D G3DSA:1.10.8.260 279 343 1.2E-123 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 Gene3D G3DSA:3.50.50.60 6 409 1.2E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.4E-10 T 14-10-2018 MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 1.4E-10 T 14-10-2018 MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 1.4E-10 T 14-10-2018 MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 SUPERFAMILY SSF160996 193 361 1.57E-46 T 14-10-2018 MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 412 7.7E-145 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 SUPERFAMILY SSF51905 1 415 7.79E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 Gene3D G3DSA:2.40.30.10 192 360 1.2E-123 T 14-10-2018 MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 Pfam PF03486 HI0933-like protein 3 413 8.7E-157 T 14-10-2018 MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 4.0E-6 T 14-10-2018 MC28_3988 a4ad2fe42409eab7c66e3ac7972bdaeb 423 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.0E-6 T 14-10-2018 MC28_F186 7066b7a6aaf26e2433a976aeb9b04b97 161 Gene3D G3DSA:3.10.129.10 3 157 7.9E-50 T 14-10-2018 MC28_F186 7066b7a6aaf26e2433a976aeb9b04b97 161 SUPERFAMILY SSF54637 8 154 7.48E-35 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_F186 7066b7a6aaf26e2433a976aeb9b04b97 161 Pfam PF07977 FabA-like domain 14 149 1.4E-25 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 Gene3D G3DSA:3.40.50.261 240 386 2.2E-57 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 45.033 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 PIRSF PIRSF001554 1 386 3.9E-157 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 Pfam PF00549 CoA-ligase 262 381 1.3E-26 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 SUPERFAMILY SSF52210 240 385 4.58E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 Pfam PF08442 ATP-grasp domain 2 202 1.9E-83 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 Gene3D G3DSA:3.30.470.20 1 234 2.8E-98 T 14-10-2018 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 SUPERFAMILY SSF56059 1 238 1.67E-86 T 14-10-2018 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 Gene3D G3DSA:3.30.1490.20 21 104 2.8E-98 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 MC28_3059 70ad0a55c67f0cf7f62fc2fe585dfbea 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 6.2E-167 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 MC28_E090 250ccad2cff5f8702230d4722ae50bbe 347 SUPERFAMILY SSF140931 91 276 8.37E-21 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_E090 250ccad2cff5f8702230d4722ae50bbe 347 Gene3D G3DSA:1.10.3290.10 20 288 1.1E-30 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_E090 250ccad2cff5f8702230d4722ae50bbe 347 Pfam PF02661 Fic/DOC family 109 215 1.7E-11 T 14-10-2018 IPR003812 Fido domain MC28_3975 8ef66e20055c6e994fc99950721026c2 172 SUPERFAMILY SSF52972 4 167 3.88E-48 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like MC28_3975 8ef66e20055c6e994fc99950721026c2 172 Gene3D G3DSA:3.90.950.10 2 171 1.8E-50 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like MC28_3975 8ef66e20055c6e994fc99950721026c2 172 Pfam PF01931 Protein of unknown function DUF84 9 159 2.0E-45 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 MC28_2135 2bb8fd7b67c01244aa3239f572cff39e 541 Pfam PF00005 ABC transporter 335 468 3.0E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2135 2bb8fd7b67c01244aa3239f572cff39e 541 Gene3D G3DSA:3.40.50.300 1 280 2.7E-59 T 14-10-2018 MC28_2135 2bb8fd7b67c01244aa3239f572cff39e 541 SUPERFAMILY SSF52540 2 255 1.33E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2135 2bb8fd7b67c01244aa3239f572cff39e 541 SMART SM00382 26 228 1.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2135 2bb8fd7b67c01244aa3239f572cff39e 541 SMART SM00382 344 513 3.1 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2135 2bb8fd7b67c01244aa3239f572cff39e 541 Pfam PF00005 ABC transporter 18 184 1.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2135 2bb8fd7b67c01244aa3239f572cff39e 541 Gene3D G3DSA:3.40.50.300 287 541 3.3E-44 T 14-10-2018 MC28_2135 2bb8fd7b67c01244aa3239f572cff39e 541 SUPERFAMILY SSF52540 296 529 2.59E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2135 2bb8fd7b67c01244aa3239f572cff39e 541 Pfam PF12848 ABC transporter 224 300 1.8E-19 T 14-10-2018 IPR032781 ABC-transporter extension domain MC28_1407 b2a0aead046f24968b0b0526bdc43098 213 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 86 173 1.3E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_1407 b2a0aead046f24968b0b0526bdc43098 213 Gene3D G3DSA:3.40.50.1000 7 199 1.7E-39 T 14-10-2018 IPR023214 HAD superfamily MC28_1407 b2a0aead046f24968b0b0526bdc43098 213 Gene3D G3DSA:1.10.150.240 18 82 1.7E-39 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_1407 b2a0aead046f24968b0b0526bdc43098 213 SUPERFAMILY SSF56784 1 209 6.64E-46 T 14-10-2018 IPR036412 HAD-like superfamily MC28_1407 b2a0aead046f24968b0b0526bdc43098 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 179 2.0E-36 T 14-10-2018 MC28_1407 b2a0aead046f24968b0b0526bdc43098 213 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 77 179 1.4E-12 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 MC28_5069 2bfe693ad406a87102071fe9801b89c9 79 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 5 53 1.1E-17 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 MC28_5069 2bfe693ad406a87102071fe9801b89c9 79 Pfam PF12728 Helix-turn-helix domain 5 53 4.3E-9 T 14-10-2018 MC28_2538 1061684e23effdf67b8285653e23e991 587 Gene3D G3DSA:3.30.750.24 426 552 5.7E-27 T 14-10-2018 IPR036513 STAS domain superfamily MC28_2538 1061684e23effdf67b8285653e23e991 587 Pfam PF00916 Sulfate permease family 17 381 1.8E-93 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 MC28_2538 1061684e23effdf67b8285653e23e991 587 TIGRFAM TIGR00815 sulP: sulfate permease 9 540 2.7E-121 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 MC28_2538 1061684e23effdf67b8285653e23e991 587 Pfam PF01740 STAS domain 441 541 8.5E-19 T 14-10-2018 IPR002645 STAS domain MC28_2538 1061684e23effdf67b8285653e23e991 587 SUPERFAMILY SSF52091 438 544 5.3E-18 T 14-10-2018 IPR036513 STAS domain superfamily MC28_G175 803008ca98f8a017fbd7329ee5ffa53c 696 SUPERFAMILY SSF56601 46 374 8.63E-69 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_G175 803008ca98f8a017fbd7329ee5ffa53c 696 Pfam PF00144 Beta-lactamase 56 375 1.8E-58 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_G175 803008ca98f8a017fbd7329ee5ffa53c 696 Gene3D G3DSA:3.40.710.10 35 394 9.4E-70 T 14-10-2018 MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 480 76.548 T 14-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 Gene3D G3DSA:3.30.70.330 406 481 2.3E-28 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 Pfam PF00271 Helicase conserved C-terminal domain 230 337 7.8E-30 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 Gene3D G3DSA:3.40.50.300 1 209 1.9E-72 T 14-10-2018 MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 Pfam PF00270 DEAD/DEAH box helicase 28 194 2.0E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 SMART SM00490 256 337 3.9E-34 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 Gene3D G3DSA:3.40.50.300 211 381 3.0E-51 T 14-10-2018 MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 Pfam PF03880 DbpA RNA binding domain 407 477 1.1E-19 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 SMART SM00487 23 220 6.6E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_4686 854304ba88df7b336b6a7d224e19ec75 481 SUPERFAMILY SSF52540 71 356 1.02E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G125 1efffeee6e61ee34bb47a63dcf46d158 409 Pfam PF13159 Domain of unknown function (DUF3994) 230 338 2.0E-34 T 14-10-2018 IPR025057 Domain of unknown function DUF3994 MC28_F142 15010f84e865e5400acf807adffe8174 271 Pfam PF17294 Uncharacterised lipoprotein family 37 253 6.3E-46 T 14-10-2018 IPR035253 Putative lipoprotein, bacteria MC28_1579 f350fa2d174b33254651e9f18c171a44 74 SUPERFAMILY SSF160582 1 62 4.84E-27 T 14-10-2018 IPR038020 MbtH-like domain superfamily MC28_1579 f350fa2d174b33254651e9f18c171a44 74 Gene3D G3DSA:3.90.820.10 1 65 2.3E-28 T 14-10-2018 MC28_1579 f350fa2d174b33254651e9f18c171a44 74 SMART SM00923 3 53 7.1E-29 T 14-10-2018 IPR005153 MbtH-like domain MC28_1579 f350fa2d174b33254651e9f18c171a44 74 Pfam PF03621 MbtH-like protein 1 52 3.6E-26 T 14-10-2018 IPR005153 MbtH-like domain MC28_1137 1ee74e83b690b3916e433d68f034e726 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 247 1.3E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MC28_1137 1ee74e83b690b3916e433d68f034e726 257 Gene3D G3DSA:3.40.50.300 2 249 3.0E-58 T 14-10-2018 MC28_1137 1ee74e83b690b3916e433d68f034e726 257 SMART SM00382 29 225 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1137 1ee74e83b690b3916e433d68f034e726 257 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_1137 1ee74e83b690b3916e433d68f034e726 257 SUPERFAMILY SSF52540 3 246 5.21E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1137 1ee74e83b690b3916e433d68f034e726 257 Pfam PF00005 ABC transporter 21 176 9.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_E157 4a2ebabb747cd13f9f9805a2dbf18ba8 326 SUPERFAMILY SSF56973 114 249 1.05E-12 T 14-10-2018 MC28_E157 4a2ebabb747cd13f9f9805a2dbf18ba8 326 Gene3D G3DSA:2.170.15.10 101 262 1.9E-10 T 14-10-2018 MC28_G069 aa1efc599f747f454fb1201db30bee66 229 Pfam PF00072 Response regulator receiver domain 8 117 2.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G069 aa1efc599f747f454fb1201db30bee66 229 SUPERFAMILY SSF52172 4 173 3.27E-40 T 14-10-2018 IPR011006 CheY-like superfamily MC28_G069 aa1efc599f747f454fb1201db30bee66 229 Gene3D G3DSA:1.10.10.10 131 229 2.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G069 aa1efc599f747f454fb1201db30bee66 229 SMART SM00862 152 225 6.5E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G069 aa1efc599f747f454fb1201db30bee66 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 3.8E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G069 aa1efc599f747f454fb1201db30bee66 229 SMART SM00448 6 117 2.1E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G069 aa1efc599f747f454fb1201db30bee66 229 Gene3D G3DSA:3.40.50.2300 2 130 1.3E-37 T 14-10-2018 MC28_1121 43f2b74ba0e5909f69de67176811cf79 549 Pfam PF13115 YtkA-like 448 529 4.1E-13 T 14-10-2018 IPR032693 YtkA-like domain MC28_1121 43f2b74ba0e5909f69de67176811cf79 549 Gene3D G3DSA:2.60.40.10 452 537 9.7E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1121 43f2b74ba0e5909f69de67176811cf79 549 Pfam PF04234 CopC domain 30 127 1.5E-18 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 MC28_1121 43f2b74ba0e5909f69de67176811cf79 549 SUPERFAMILY SSF81296 29 127 3.15E-19 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_1121 43f2b74ba0e5909f69de67176811cf79 549 Pfam PF05425 Copper resistance protein D 335 426 5.9E-17 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 MC28_1121 43f2b74ba0e5909f69de67176811cf79 549 Gene3D G3DSA:2.60.40.1220 30 132 1.2E-21 T 14-10-2018 MC28_3598 9eea79c0803a14ed26e99056a7f8c846 97 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 7 90 3.7E-36 T 14-10-2018 IPR022477 Sporulation protein YqfC MC28_3598 9eea79c0803a14ed26e99056a7f8c846 97 Pfam PF07873 YabP family 26 89 3.7E-16 T 14-10-2018 IPR022476 Sporulation protein YabP/YqfC MC28_4978 f4aa1db9f9751749e3f6b4aff1ba49fb 264 Pfam PF03567 Sulfotransferase family 94 260 1.1E-9 T 14-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 MC28_3654 c8c10378e84577514665ffb5ffb1de69 152 Gene3D G3DSA:3.40.630.30 13 139 2.7E-22 T 14-10-2018 MC28_3654 c8c10378e84577514665ffb5ffb1de69 152 SUPERFAMILY SSF55729 20 130 8.23E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3654 c8c10378e84577514665ffb5ffb1de69 152 Pfam PF13508 Acetyltransferase (GNAT) domain 57 128 7.6E-10 T 14-10-2018 IPR000182 GNAT domain MC28_5412 fa9c932dc9876a2fcd0a99b5ef3ceb57 210 Gene3D G3DSA:2.40.260.10 53 210 3.3E-47 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_5412 fa9c932dc9876a2fcd0a99b5ef3ceb57 210 Pfam PF04203 Sortase family 83 204 2.1E-28 T 14-10-2018 IPR005754 Sortase family MC28_5412 fa9c932dc9876a2fcd0a99b5ef3ceb57 210 SUPERFAMILY SSF63817 12 206 3.79E-45 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_5412 fa9c932dc9876a2fcd0a99b5ef3ceb57 210 TIGRFAM TIGR01076 sortase_fam: sortase 81 205 7.9E-25 T 14-10-2018 IPR005754 Sortase family MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 SUPERFAMILY SSF56601 55 306 9.68E-76 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 Pfam PF13354 Beta-lactamase enzyme family 72 278 2.2E-37 T 14-10-2018 MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 PRINTS PR00118 Beta-lactamase class A signature 123 148 1.1E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 PRINTS PR00118 Beta-lactamase class A signature 185 210 1.1E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 PRINTS PR00118 Beta-lactamase class A signature 238 253 1.1E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 PRINTS PR00118 Beta-lactamase class A signature 221 236 1.1E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 PRINTS PR00118 Beta-lactamase class A signature 52 76 1.1E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 PRINTS PR00118 Beta-lactamase class A signature 159 183 1.1E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 PRINTS PR00118 Beta-lactamase class A signature 83 100 1.1E-61 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 Gene3D G3DSA:3.40.710.10 38 305 3.0E-78 T 14-10-2018 MC28_1922 c2c831c6e6870d18e64cd6444bc29058 310 ProSitePatterns PS00146 Beta-lactamase class-A active site. 85 100 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 MC28_1878 0f0dd0214de72357c9f289b0d0deeb8a 93 TIGRFAM TIGR03601 B_an_ocin: bacteriocin, heterocycloanthracin/sonorensin family 6 91 2.1E-35 T 14-10-2018 IPR019890 Bacteriocin, heterocycloanthracin/sonorensin family MC28_2519 03ab7c5236ba6eb19de8c7a02d826419 331 Pfam PF13602 Zinc-binding dehydrogenase 189 327 1.5E-28 T 14-10-2018 MC28_2519 03ab7c5236ba6eb19de8c7a02d826419 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 6.9E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_2519 03ab7c5236ba6eb19de8c7a02d826419 331 Gene3D G3DSA:3.40.50.720 126 296 9.2E-101 T 14-10-2018 MC28_2519 03ab7c5236ba6eb19de8c7a02d826419 331 SMART SM00829 10 327 1.6E-50 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_2519 03ab7c5236ba6eb19de8c7a02d826419 331 SUPERFAMILY SSF51735 117 260 5.58E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2519 03ab7c5236ba6eb19de8c7a02d826419 331 Gene3D G3DSA:3.90.180.10 8 325 9.2E-101 T 14-10-2018 MC28_2519 03ab7c5236ba6eb19de8c7a02d826419 331 SUPERFAMILY SSF50129 1 155 3.8E-36 T 14-10-2018 IPR011032 GroES-like superfamily MC28_G235 a9abb78a2feb13acf1803a659ddb6924 51 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 27 50 9.7E-11 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_G235 a9abb78a2feb13acf1803a659ddb6924 51 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 26 48 3.2E-10 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_3486 ec02d5e9cf39fc68c754f4ca42c64569 308 SUPERFAMILY SSF52540 25 260 1.06E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3486 ec02d5e9cf39fc68c754f4ca42c64569 308 SMART SM00382 133 282 1.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3486 ec02d5e9cf39fc68c754f4ca42c64569 308 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 26 292 2.6E-122 T 14-10-2018 IPR014217 Sporulation stage III, protein AA MC28_3486 ec02d5e9cf39fc68c754f4ca42c64569 308 Gene3D G3DSA:3.40.50.300 115 269 2.9E-22 T 14-10-2018 MC28_0995 345075a9be7042b9ac03960b49110bea 384 Pfam PF07690 Major Facilitator Superfamily 2 216 3.9E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0995 345075a9be7042b9ac03960b49110bea 384 PRINTS PR01035 Tetracycline resistance protein signature 149 169 1.1E-38 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0995 345075a9be7042b9ac03960b49110bea 384 PRINTS PR01035 Tetracycline resistance protein signature 3 19 1.1E-38 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0995 345075a9be7042b9ac03960b49110bea 384 PRINTS PR01035 Tetracycline resistance protein signature 238 258 1.1E-38 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0995 345075a9be7042b9ac03960b49110bea 384 PRINTS PR01035 Tetracycline resistance protein signature 121 143 1.1E-38 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0995 345075a9be7042b9ac03960b49110bea 384 PRINTS PR01035 Tetracycline resistance protein signature 33 52 1.1E-38 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0995 345075a9be7042b9ac03960b49110bea 384 PRINTS PR01035 Tetracycline resistance protein signature 91 112 1.1E-38 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0995 345075a9be7042b9ac03960b49110bea 384 PRINTS PR01035 Tetracycline resistance protein signature 64 88 1.1E-38 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0995 345075a9be7042b9ac03960b49110bea 384 PRINTS PR01035 Tetracycline resistance protein signature 330 353 1.1E-38 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_0995 345075a9be7042b9ac03960b49110bea 384 SUPERFAMILY SSF103473 2 377 1.57E-61 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0995 345075a9be7042b9ac03960b49110bea 384 Gene3D G3DSA:1.20.1250.20 1 378 2.9E-67 T 14-10-2018 MC28_0788 5efecdf85af823521d0e74ae3405fe7d 114 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 11 112 3.0E-34 T 14-10-2018 IPR014913 Protein of unknown function DUF1798 MC28_0788 5efecdf85af823521d0e74ae3405fe7d 114 Gene3D G3DSA:1.20.120.440 2 114 3.5E-32 T 14-10-2018 IPR023351 YppE-like superfamily MC28_0788 5efecdf85af823521d0e74ae3405fe7d 114 SUPERFAMILY SSF140415 5 114 1.31E-38 T 14-10-2018 IPR023351 YppE-like superfamily MC28_4085 50d4bbad7f08153dd15a07fae2c7c0cb 345 Pfam PF02698 DUF218 domain 165 314 3.9E-31 T 14-10-2018 IPR003848 Domain of unknown function DUF218 MC28_3434 eb48530ffd5a28b39b475b65bfd7a23b 83 Pfam PF13068 Protein of unknown function (DUF3932) 1 81 1.0E-52 T 14-10-2018 IPR025173 Protein of unknown function DUF3932 MC28_F287 4a54bc77cd6ab6ec80aeea8ce493897c 75 SUPERFAMILY SSF52980 17 74 5.09E-8 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 MC28_F287 4a54bc77cd6ab6ec80aeea8ce493897c 75 Pfam PF04471 Restriction endonuclease 13 75 2.1E-14 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 MC28_3589 17e77ff3cb06da5c78074ac8769399db 252 SUPERFAMILY SSF50249 4 81 3.43E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3589 17e77ff3cb06da5c78074ac8769399db 252 Pfam PF11967 Recombination protein O N terminal 5 81 4.2E-26 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal MC28_3589 17e77ff3cb06da5c78074ac8769399db 252 Gene3D G3DSA:1.20.1440.120 92 229 1.3E-17 T 14-10-2018 MC28_3589 17e77ff3cb06da5c78074ac8769399db 252 Gene3D G3DSA:2.40.50.140 3 85 5.5E-16 T 14-10-2018 MC28_3589 17e77ff3cb06da5c78074ac8769399db 252 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 247 6.6E-76 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 MC28_3589 17e77ff3cb06da5c78074ac8769399db 252 Gene3D G3DSA:3.30.60.100 150 189 1.3E-17 T 14-10-2018 MC28_3589 17e77ff3cb06da5c78074ac8769399db 252 Pfam PF02565 Recombination protein O C terminal 86 242 1.1E-33 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 MC28_3589 17e77ff3cb06da5c78074ac8769399db 252 SUPERFAMILY SSF57863 84 235 4.45E-45 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger MC28_3589 17e77ff3cb06da5c78074ac8769399db 252 Hamap MF_00201 DNA repair protein RecO [recO]. 5 247 28.861 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 MC28_0265 9d934edbbdfb03f7c1e3038ecc3bb982 149 Pfam PF01381 Helix-turn-helix 7 61 6.6E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0265 9d934edbbdfb03f7c1e3038ecc3bb982 149 SMART SM00530 6 61 1.0E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0265 9d934edbbdfb03f7c1e3038ecc3bb982 149 SUPERFAMILY SSF47413 1 67 9.47E-21 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_0265 9d934edbbdfb03f7c1e3038ecc3bb982 149 Gene3D G3DSA:1.10.260.40 1 72 2.2E-24 T 14-10-2018 MC28_0932 89114abea96c507831b3d6d97e04067b 341 SUPERFAMILY SSF53850 42 336 1.96E-69 T 14-10-2018 MC28_0932 89114abea96c507831b3d6d97e04067b 341 Gene3D G3DSA:3.40.190.10 144 323 2.0E-72 T 14-10-2018 MC28_0932 89114abea96c507831b3d6d97e04067b 341 Gene3D G3DSA:3.40.190.10 45 309 2.0E-72 T 14-10-2018 MC28_0932 89114abea96c507831b3d6d97e04067b 341 Pfam PF13343 Bacterial extracellular solute-binding protein 89 327 5.6E-42 T 14-10-2018 MC28_0932 89114abea96c507831b3d6d97e04067b 341 PIRSF PIRSF002825 1 340 2.7E-62 T 14-10-2018 IPR026045 Ferric binding protein MC28_E064 33202103216ffa43367ca0ed759ad0e9 836 Gene3D G3DSA:2.60.120.260 305 654 4.1E-62 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E064 33202103216ffa43367ca0ed759ad0e9 836 Gene3D G3DSA:1.20.190.10 55 293 4.7E-53 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E064 33202103216ffa43367ca0ed759ad0e9 836 SUPERFAMILY SSF51096 304 512 7.15E-27 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_E064 33202103216ffa43367ca0ed759ad0e9 836 SUPERFAMILY SSF56849 35 291 1.07E-45 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_E064 33202103216ffa43367ca0ed759ad0e9 836 Pfam PF03945 delta endotoxin, N-terminal domain 96 291 4.2E-11 T 14-10-2018 IPR005639 Pesticidal crystal protein, N-terminal GO:0009405|GO:0090729 MC28_E064 33202103216ffa43367ca0ed759ad0e9 836 Pfam PF00555 delta endotoxin 306 512 4.3E-26 T 14-10-2018 IPR001178 Pesticidal crystal protein, central domain GO:0005102|GO:0009405 MC28_E064 33202103216ffa43367ca0ed759ad0e9 836 Pfam PF03944 delta endotoxin 523 654 2.4E-25 T 14-10-2018 IPR005638 Pesticidal crystal protein, C-terminal GO:0090729 MC28_E064 33202103216ffa43367ca0ed759ad0e9 836 SUPERFAMILY SSF49785 515 654 3.4E-23 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E064 33202103216ffa43367ca0ed759ad0e9 836 Gene3D G3DSA:2.100.10.10 311 511 4.1E-62 T 14-10-2018 IPR036399 Pesticidal crystal protein, central domain superfamily GO:0005102|GO:0009405 MC28_5429 71a4ea20674561a3dbbd2d2ac453b02f 471 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 MC28_5429 71a4ea20674561a3dbbd2d2ac453b02f 471 Gene3D G3DSA:1.20.1740.10 9 470 8.3E-68 T 14-10-2018 MC28_5429 71a4ea20674561a3dbbd2d2ac453b02f 471 Pfam PF00324 Amino acid permease 18 458 2.0E-127 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_5429 71a4ea20674561a3dbbd2d2ac453b02f 471 PIRSF PIRSF006060 1 471 3.5E-85 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_F272 9da84663287084cd6f3338adb8ac0b6e 364 TIGRFAM TIGR03187 DGQHR: DGQHR domain 20 286 1.1E-22 T 14-10-2018 IPR017601 DGQHR-containing domain MC28_F272 9da84663287084cd6f3338adb8ac0b6e 364 Pfam PF14072 DNA-sulfur modification-associated 18 336 6.5E-30 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB MC28_2447 5796de67a5e946247df700728d478ab7 550 SUPERFAMILY SSF52540 5 231 3.06E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2447 5796de67a5e946247df700728d478ab7 550 SMART SM00382 318 501 9.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2447 5796de67a5e946247df700728d478ab7 550 SMART SM00382 30 219 4.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2447 5796de67a5e946247df700728d478ab7 550 SUPERFAMILY SSF52540 275 518 2.79E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2447 5796de67a5e946247df700728d478ab7 550 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2447 5796de67a5e946247df700728d478ab7 550 Gene3D G3DSA:3.40.50.300 275 525 1.0E-59 T 14-10-2018 MC28_2447 5796de67a5e946247df700728d478ab7 550 Pfam PF00005 ABC transporter 309 452 1.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2447 5796de67a5e946247df700728d478ab7 550 Pfam PF00005 ABC transporter 21 170 2.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2447 5796de67a5e946247df700728d478ab7 550 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2447 5796de67a5e946247df700728d478ab7 550 Gene3D G3DSA:3.40.50.300 3 243 1.3E-65 T 14-10-2018 MC28_D062 fa9e29c77c48ce0c66435a84e70a3c40 290 Pfam PF02481 DNA recombination-mediator protein A 79 277 2.5E-58 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 MC28_D062 fa9e29c77c48ce0c66435a84e70a3c40 290 SUPERFAMILY SSF102405 88 269 4.58E-22 T 14-10-2018 MC28_D062 fa9e29c77c48ce0c66435a84e70a3c40 290 Gene3D G3DSA:3.40.50.450 21 290 4.1E-65 T 14-10-2018 MC28_G005 c2c1744a20197c48488bb6be6fc97a05 150 Gene3D G3DSA:3.40.140.10 23 150 8.2E-40 T 14-10-2018 MC28_G005 c2c1744a20197c48488bb6be6fc97a05 150 SUPERFAMILY SSF102712 47 129 8.5E-5 T 14-10-2018 MC28_G005 c2c1744a20197c48488bb6be6fc97a05 150 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 99 104 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site MC28_G005 c2c1744a20197c48488bb6be6fc97a05 150 Pfam PF04002 RadC-like JAB domain 28 148 7.4E-38 T 14-10-2018 IPR025657 RadC-like JAB domain MC28_0792 cf447326c8e3721074d9da4a4e876fcb 184 Gene3D G3DSA:3.40.50.450 1 180 6.6E-69 T 14-10-2018 MC28_0792 cf447326c8e3721074d9da4a4e876fcb 184 SUPERFAMILY SSF102405 1 177 7.51E-63 T 14-10-2018 MC28_0792 cf447326c8e3721074d9da4a4e876fcb 184 PIRSF PIRSF021290 1 179 1.4E-73 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 MC28_0792 cf447326c8e3721074d9da4a4e876fcb 184 Pfam PF06908 Protein of unknown function (DUF1273) 4 171 2.2E-69 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 MC28_0792 cf447326c8e3721074d9da4a4e876fcb 184 Hamap MF_01575 UPF0398 protein . 1 177 35.967 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 MC28_F242 d58614add40417d6e6f5a90654d06e04 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 137 3.5E-38 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal MC28_F242 d58614add40417d6e6f5a90654d06e04 373 SUPERFAMILY SSF52283 4 357 2.04E-52 T 14-10-2018 MC28_F242 d58614add40417d6e6f5a90654d06e04 373 SUPERFAMILY SSF51735 137 305 1.66E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_F242 d58614add40417d6e6f5a90654d06e04 373 Gene3D G3DSA:3.40.50.720 130 307 7.3E-124 T 14-10-2018 MC28_F242 d58614add40417d6e6f5a90654d06e04 373 SMART SM01003 7 137 4.3E-60 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal MC28_F242 d58614add40417d6e6f5a90654d06e04 373 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 7 33 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 MC28_F242 d58614add40417d6e6f5a90654d06e04 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 354 2.7E-72 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MC28_F242 d58614add40417d6e6f5a90654d06e04 373 Gene3D G3DSA:3.40.50.720 6 355 7.3E-124 T 14-10-2018 MC28_F242 d58614add40417d6e6f5a90654d06e04 373 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 4 372 7.4E-134 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 MC28_F242 d58614add40417d6e6f5a90654d06e04 373 PIRSF PIRSF000183 4 373 3.3E-157 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 MC28_F242 d58614add40417d6e6f5a90654d06e04 373 SMART SM01002 149 299 2.0E-62 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MC28_3619 e9bee376371faf055cc819fbefba8f18 198 Gene3D G3DSA:1.10.150.310 145 198 4.8E-14 T 14-10-2018 MC28_3619 e9bee376371faf055cc819fbefba8f18 198 Pfam PF12836 Helix-hairpin-helix motif 134 195 9.1E-22 T 14-10-2018 MC28_3619 e9bee376371faf055cc819fbefba8f18 198 SUPERFAMILY SSF47781 125 197 1.06E-26 T 14-10-2018 IPR010994 RuvA domain 2-like MC28_3619 e9bee376371faf055cc819fbefba8f18 198 SMART SM00278 145 164 0.097 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_3619 e9bee376371faf055cc819fbefba8f18 198 SMART SM00278 175 194 8.1 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MC28_3619 e9bee376371faf055cc819fbefba8f18 198 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 135 197 1.3E-24 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain MC28_3619 e9bee376371faf055cc819fbefba8f18 198 Pfam PF10531 SLBB domain 64 112 1.9E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_3619 e9bee376371faf055cc819fbefba8f18 198 Gene3D G3DSA:3.10.560.10 49 144 1.0E-7 T 14-10-2018 MC28_1976 864debecc936c913d402a58b28aa5b71 401 Gene3D G3DSA:3.40.50.300 32 286 1.7E-77 T 14-10-2018 MC28_1976 864debecc936c913d402a58b28aa5b71 401 SMART SM00382 54 243 6.6E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1976 864debecc936c913d402a58b28aa5b71 401 Pfam PF00571 CBS domain 338 390 5.6E-4 T 14-10-2018 IPR000644 CBS domain MC28_1976 864debecc936c913d402a58b28aa5b71 401 Pfam PF00571 CBS domain 294 329 0.0064 T 14-10-2018 IPR000644 CBS domain MC28_1976 864debecc936c913d402a58b28aa5b71 401 Gene3D G3DSA:3.10.580.10 287 396 2.5E-13 T 14-10-2018 MC28_1976 864debecc936c913d402a58b28aa5b71 401 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_1976 864debecc936c913d402a58b28aa5b71 401 SUPERFAMILY SSF54631 280 392 1.21E-20 T 14-10-2018 MC28_1976 864debecc936c913d402a58b28aa5b71 401 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 394 2.0E-152 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 MC28_1976 864debecc936c913d402a58b28aa5b71 401 SUPERFAMILY SSF52540 44 271 5.14E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1976 864debecc936c913d402a58b28aa5b71 401 SMART SM00116 283 331 0.33 T 14-10-2018 IPR000644 CBS domain MC28_1976 864debecc936c913d402a58b28aa5b71 401 SMART SM00116 343 390 0.0032 T 14-10-2018 IPR000644 CBS domain MC28_1976 864debecc936c913d402a58b28aa5b71 401 Pfam PF00005 ABC transporter 46 193 1.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4661 ccd324eb62a0fa5e4493da6b0bf58b0e 267 Pfam PF00535 Glycosyl transferase family 2 2 113 8.8E-20 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_4661 ccd324eb62a0fa5e4493da6b0bf58b0e 267 Gene3D G3DSA:3.90.550.10 1 208 2.0E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4661 ccd324eb62a0fa5e4493da6b0bf58b0e 267 SUPERFAMILY SSF53448 1 221 1.34E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_3801 d76d8169f415195109bac1b2915eccb0 251 SUPERFAMILY SSF52402 1 240 1.81E-71 T 14-10-2018 MC28_3801 d76d8169f415195109bac1b2915eccb0 251 SMART SM00893 15 205 1.1E-54 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 MC28_3801 d76d8169f415195109bac1b2915eccb0 251 Pfam PF01012 Electron transfer flavoprotein domain 22 200 5.8E-48 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 MC28_3801 d76d8169f415195109bac1b2915eccb0 251 Gene3D G3DSA:3.40.50.620 1 250 1.1E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3801 d76d8169f415195109bac1b2915eccb0 251 PIRSF PIRSF000090 1 251 7.1E-72 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 MC28_3801 d76d8169f415195109bac1b2915eccb0 251 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 149 169 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 MC28_1677 597010c5e320472925bba5c207fd3dd3 228 SMART SM00849 19 222 7.6E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_1677 597010c5e320472925bba5c207fd3dd3 228 Gene3D G3DSA:3.60.15.10 15 227 1.1E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1677 597010c5e320472925bba5c207fd3dd3 228 Pfam PF00753 Metallo-beta-lactamase superfamily 23 215 8.6E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_1677 597010c5e320472925bba5c207fd3dd3 228 SUPERFAMILY SSF56281 19 225 1.26E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_4328 cb45c431f40f74b5f3cc2548a3182c06 387 PRINTS PR01035 Tetracycline resistance protein signature 9 25 4.0E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4328 cb45c431f40f74b5f3cc2548a3182c06 387 PRINTS PR01035 Tetracycline resistance protein signature 39 58 4.0E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4328 cb45c431f40f74b5f3cc2548a3182c06 387 PRINTS PR01035 Tetracycline resistance protein signature 361 380 4.0E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4328 cb45c431f40f74b5f3cc2548a3182c06 387 PRINTS PR01035 Tetracycline resistance protein signature 97 118 4.0E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4328 cb45c431f40f74b5f3cc2548a3182c06 387 PRINTS PR01035 Tetracycline resistance protein signature 157 177 4.0E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4328 cb45c431f40f74b5f3cc2548a3182c06 387 Pfam PF07690 Major Facilitator Superfamily 7 314 1.0E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_4328 cb45c431f40f74b5f3cc2548a3182c06 387 SUPERFAMILY SSF103473 2 379 3.01E-58 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4328 cb45c431f40f74b5f3cc2548a3182c06 387 Gene3D G3DSA:1.20.1250.20 1 379 1.2E-47 T 14-10-2018 MC28_D171 385491f9d56be24fb146cad5f152a583 469 SUPERFAMILY SSF50370 336 467 5.42E-27 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_D171 385491f9d56be24fb146cad5f152a583 469 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 368 452 1.6E-7 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_D171 385491f9d56be24fb146cad5f152a583 469 Pfam PF00149 Calcineurin-like phosphoesterase 21 275 4.5E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_D171 385491f9d56be24fb146cad5f152a583 469 SMART SM00458 335 467 1.9E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_D171 385491f9d56be24fb146cad5f152a583 469 SUPERFAMILY SSF56300 75 324 7.94E-24 T 14-10-2018 MC28_D171 385491f9d56be24fb146cad5f152a583 469 Gene3D G3DSA:3.60.21.10 54 323 1.4E-10 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_D171 385491f9d56be24fb146cad5f152a583 469 Gene3D G3DSA:2.80.10.50 329 469 1.0E-30 T 14-10-2018 MC28_5404 abaa321ecd5139fd855e9024aff88e49 437 Pfam PF04030 D-arabinono-1,4-lactone oxidase 179 429 1.5E-79 T 14-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 MC28_5404 abaa321ecd5139fd855e9024aff88e49 437 Gene3D G3DSA:3.30.465.10 74 195 6.9E-33 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 MC28_5404 abaa321ecd5139fd855e9024aff88e49 437 SUPERFAMILY SSF56176 8 183 1.54E-47 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_5404 abaa321ecd5139fd855e9024aff88e49 437 Pfam PF01565 FAD binding domain 20 155 2.7E-29 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 MC28_5404 abaa321ecd5139fd855e9024aff88e49 437 PIRSF PIRSF000136 1 437 2.0E-161 T 14-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 MC28_5404 abaa321ecd5139fd855e9024aff88e49 437 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 20 53 - T 14-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 MC28_5404 abaa321ecd5139fd855e9024aff88e49 437 Gene3D G3DSA:3.30.43.10 4 72 2.2E-20 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 MC28_5404 abaa321ecd5139fd855e9024aff88e49 437 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 9 431 1.2E-120 T 14-10-2018 MC28_5404 abaa321ecd5139fd855e9024aff88e49 437 Gene3D G3DSA:3.30.70.2520 302 394 1.5E-27 T 14-10-2018 MC28_3459 34fb9baa3be577cf3bd027cdba172c33 77 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 77 4.0E-32 T 14-10-2018 IPR020138 Uncharacterised protein family YqzF MC28_3459 34fb9baa3be577cf3bd027cdba172c33 77 Pfam PF11118 Protein of unknown function (DUF2627) 2 77 1.7E-29 T 14-10-2018 IPR020138 Uncharacterised protein family YqzF MC28_3198 9f03dce4160a1b6139decb73a0f04035 344 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 206 273 9.8E-18 T 14-10-2018 IPR006343 DnaD domain MC28_3198 9f03dce4160a1b6139decb73a0f04035 344 Pfam PF07261 Replication initiation and membrane attachment 207 274 6.7E-17 T 14-10-2018 IPR006343 DnaD domain MC28_3198 9f03dce4160a1b6139decb73a0f04035 344 Gene3D G3DSA:1.10.10.630 203 274 3.4E-17 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_3198 9f03dce4160a1b6139decb73a0f04035 344 SUPERFAMILY SSF158499 206 268 9.15E-15 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_3347 bba446d6d0aeb82bb878ddc087e63ff8 382 SUPERFAMILY SSF51556 59 348 5.78E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_3347 bba446d6d0aeb82bb878ddc087e63ff8 382 PIRSF PIRSF038994 3 380 6.5E-117 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 MC28_3347 bba446d6d0aeb82bb878ddc087e63ff8 382 Pfam PF01979 Amidohydrolase family 55 362 1.7E-23 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 MC28_3347 bba446d6d0aeb82bb878ddc087e63ff8 382 Gene3D G3DSA:3.20.20.140 59 349 9.5E-130 T 14-10-2018 MC28_3347 bba446d6d0aeb82bb878ddc087e63ff8 382 SUPERFAMILY SSF51338 6 378 2.82E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_3347 bba446d6d0aeb82bb878ddc087e63ff8 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 6 372 6.6E-104 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 MC28_3347 bba446d6d0aeb82bb878ddc087e63ff8 382 Gene3D G3DSA:2.30.40.10 13 375 9.5E-130 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_0359 fa216f5626692973b95ea9ca111de910 92 Gene3D G3DSA:1.10.150.20 36 92 3.7E-14 T 14-10-2018 MC28_0359 fa216f5626692973b95ea9ca111de910 92 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 39 86 9.3E-8 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_0359 fa216f5626692973b95ea9ca111de910 92 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 49 92 0.002 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MC28_0359 fa216f5626692973b95ea9ca111de910 92 SUPERFAMILY SSF47789 39 92 1.44E-12 T 14-10-2018 MC28_G330 df980617c8d99184a1ce68c47cdaa32b 214 Gene3D G3DSA:2.10.109.10 85 210 1.3E-25 T 14-10-2018 MC28_G330 df980617c8d99184a1ce68c47cdaa32b 214 SMART SM00530 7 62 4.1E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G330 df980617c8d99184a1ce68c47cdaa32b 214 SUPERFAMILY SSF47413 2 67 1.05E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_G330 df980617c8d99184a1ce68c47cdaa32b 214 Gene3D G3DSA:1.10.260.40 1 80 1.7E-16 T 14-10-2018 MC28_G330 df980617c8d99184a1ce68c47cdaa32b 214 Pfam PF00717 Peptidase S24-like 122 177 7.7E-10 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C MC28_G330 df980617c8d99184a1ce68c47cdaa32b 214 Pfam PF01381 Helix-turn-helix 9 62 8.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G330 df980617c8d99184a1ce68c47cdaa32b 214 SUPERFAMILY SSF51306 80 209 1.29E-22 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily MC28_3362 424e875ad4554e6efb2d65fe2fb22a04 206 Gene3D G3DSA:2.60.480.10 1 96 1.4E-13 T 14-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily MC28_3362 424e875ad4554e6efb2d65fe2fb22a04 206 Pfam PF12164 Stage V sporulation protein AA 4 88 1.6E-18 T 14-10-2018 IPR021997 Stage V sporulation protein AA MC28_3991 fc8101c075ab2ad8c05436ac9b71626f 151 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 25 150 3.1E-12 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like MC28_3991 fc8101c075ab2ad8c05436ac9b71626f 151 SUPERFAMILY SSF55961 10 150 4.72E-43 T 14-10-2018 MC28_3991 fc8101c075ab2ad8c05436ac9b71626f 151 Gene3D G3DSA:3.30.530.20 9 151 3.1E-43 T 14-10-2018 IPR023393 START-like domain superfamily MC28_2150 680e6f59c418937af448338a912b556a 140 Pfam PF14567 SMI1-KNR4 cell-wall 15 133 1.8E-20 T 14-10-2018 MC28_2150 680e6f59c418937af448338a912b556a 140 Gene3D G3DSA:3.40.1580.10 1 137 1.1E-20 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily MC28_2150 680e6f59c418937af448338a912b556a 140 SUPERFAMILY SSF160631 13 136 4.32E-26 T 14-10-2018 MC28_2150 680e6f59c418937af448338a912b556a 140 SMART SM00860 14 132 3.0E-4 T 14-10-2018 IPR018958 Knr4/Smi1-like domain MC28_0373 7c9c6ab63fd82b5a718fd648a79e24bf 319 SUPERFAMILY SSF53800 3 305 1.24E-88 T 14-10-2018 MC28_0373 7c9c6ab63fd82b5a718fd648a79e24bf 319 ProSitePatterns PS00534 Ferrochelatase signature. 176 194 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 MC28_0373 7c9c6ab63fd82b5a718fd648a79e24bf 319 Hamap MF_00323 Ferrochelatase [hemH]. 4 306 31.697 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 MC28_0373 7c9c6ab63fd82b5a718fd648a79e24bf 319 Gene3D G3DSA:3.40.50.1400 8 302 1.5E-102 T 14-10-2018 MC28_0373 7c9c6ab63fd82b5a718fd648a79e24bf 319 Pfam PF00762 Ferrochelatase 5 305 1.2E-81 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 MC28_0373 7c9c6ab63fd82b5a718fd648a79e24bf 319 TIGRFAM TIGR00109 hemH: ferrochelatase 2 306 1.1E-92 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 MC28_0373 7c9c6ab63fd82b5a718fd648a79e24bf 319 Gene3D G3DSA:3.40.50.1400 148 287 1.5E-102 T 14-10-2018 MC28_G010 fe84dbe6f26f3f574eb5b24f0dbcef01 509 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 26 507 75.344 T 14-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 MC28_G010 fe84dbe6f26f3f574eb5b24f0dbcef01 509 Gene3D G3DSA:3.40.605.10 48 484 1.4E-155 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_G010 fe84dbe6f26f3f574eb5b24f0dbcef01 509 Gene3D G3DSA:3.40.309.10 276 476 1.4E-155 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_G010 fe84dbe6f26f3f574eb5b24f0dbcef01 509 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 301 312 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 MC28_G010 fe84dbe6f26f3f574eb5b24f0dbcef01 509 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 31 507 5.9E-182 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 MC28_G010 fe84dbe6f26f3f574eb5b24f0dbcef01 509 Pfam PF00171 Aldehyde dehydrogenase family 39 501 5.9E-151 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_G010 fe84dbe6f26f3f574eb5b24f0dbcef01 509 SUPERFAMILY SSF53720 19 506 1.57E-152 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_G180 39d5413c02de88324e8f68427dfab440 157 Pfam PF06718 Protein of unknown function (DUF1203) 41 156 4.6E-35 T 14-10-2018 IPR009593 Protein of unknown function DUF1203 MC28_G180 39d5413c02de88324e8f68427dfab440 157 PIRSF PIRSF034110 1 157 2.3E-56 T 14-10-2018 IPR009593 Protein of unknown function DUF1203 MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 Gene3D G3DSA:3.40.50.970 370 561 1.9E-59 T 14-10-2018 MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 333 3.7E-27 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 Gene3D G3DSA:3.40.50.970 2 191 3.1E-69 T 14-10-2018 MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 SUPERFAMILY SSF52518 12 182 4.32E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 SUPERFAMILY SSF52518 375 552 2.16E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 16 553 5.5E-264 T 14-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 Gene3D G3DSA:3.40.50.1220 192 366 2.6E-37 T 14-10-2018 MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 542 2.4E-43 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 181 2.8E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 SUPERFAMILY SSF52467 194 360 3.52E-35 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_0140 51a8b88bb629ec1e3dd1432b9bd3d30d 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 MC28_4665 a85ca608ed82805036568d67976eeee2 479 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 130 289 3.2E-8 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like MC28_4489 6e0dd717d4ab4bb063cdf1d730c8f39c 444 Pfam PF07690 Major Facilitator Superfamily 35 397 7.8E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_4489 6e0dd717d4ab4bb063cdf1d730c8f39c 444 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 MC28_4489 6e0dd717d4ab4bb063cdf1d730c8f39c 444 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 415 2.3E-126 T 14-10-2018 MC28_4489 6e0dd717d4ab4bb063cdf1d730c8f39c 444 Gene3D G3DSA:1.20.1250.20 19 226 7.5E-49 T 14-10-2018 MC28_4489 6e0dd717d4ab4bb063cdf1d730c8f39c 444 PIRSF PIRSF002808 6 444 1.3E-125 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 MC28_4489 6e0dd717d4ab4bb063cdf1d730c8f39c 444 SUPERFAMILY SSF103473 14 439 1.57E-79 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4489 6e0dd717d4ab4bb063cdf1d730c8f39c 444 Gene3D G3DSA:1.20.1250.20 241 441 2.0E-49 T 14-10-2018 MC28_1111 244aee42b4ec2765d63913336bba13ef 294 Pfam PF02517 CAAX protease self-immunity 152 247 4.0E-9 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_1977 333ea3e4178b9d492a36f95c8767106f 285 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 274 1.9E-68 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 MC28_1977 333ea3e4178b9d492a36f95c8767106f 285 Gene3D G3DSA:3.40.190.100 112 219 4.2E-93 T 14-10-2018 MC28_1977 333ea3e4178b9d492a36f95c8767106f 285 Gene3D G3DSA:3.40.190.10 32 283 4.2E-93 T 14-10-2018 MC28_1977 333ea3e4178b9d492a36f95c8767106f 285 SUPERFAMILY SSF53850 26 284 5.88E-81 T 14-10-2018 MC28_D182 ed36b1dc78fffce37e793d1d83c0b2a5 314 Pfam PF14253 Bacteriophage abortive infection AbiH 7 284 7.1E-48 T 14-10-2018 IPR025935 Bacteriophage abortive infection AbiH MC28_2537 840b89bd26b1d0454bfe058590b54276 113 Pfam PF08274 PhnA Zinc-Ribbon 4 32 4.2E-17 T 14-10-2018 IPR013987 PhnA protein, N-terminal MC28_2537 840b89bd26b1d0454bfe058590b54276 113 Gene3D G3DSA:2.20.25.10 1 42 1.2E-20 T 14-10-2018 MC28_2537 840b89bd26b1d0454bfe058590b54276 113 SUPERFAMILY SSF82057 41 113 2.11E-29 T 14-10-2018 MC28_2537 840b89bd26b1d0454bfe058590b54276 113 SUPERFAMILY SSF57783 3 36 6.12E-15 T 14-10-2018 MC28_2537 840b89bd26b1d0454bfe058590b54276 113 Gene3D G3DSA:2.30.30.40 43 113 3.3E-35 T 14-10-2018 MC28_2537 840b89bd26b1d0454bfe058590b54276 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 112 1.8E-50 T 14-10-2018 IPR004624 PhnA protein MC28_2537 840b89bd26b1d0454bfe058590b54276 113 Pfam PF03831 PhnA domain 46 113 9.0E-34 T 14-10-2018 IPR013988 PhnA protein, C-terminal MC28_4218 f4bfca8505aa5c931e2cf4cbaea44e52 163 SUPERFAMILY SSF101307 7 158 7.85E-58 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 MC28_4218 f4bfca8505aa5c931e2cf4cbaea44e52 163 Gene3D G3DSA:1.10.3760.10 1 163 1.2E-74 T 14-10-2018 MC28_4218 f4bfca8505aa5c931e2cf4cbaea44e52 163 Pfam PF04608 Phosphatidylglycerophosphatase A 13 156 3.8E-21 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 MC28_4218 f4bfca8505aa5c931e2cf4cbaea44e52 163 PIRSF PIRSF019587 2 163 3.0E-77 T 14-10-2018 IPR026038 Putative phosphatidylglycerophosphatase MC28_3246 8721282e9a44f3b5938df7f0d5c8c3d6 208 SUPERFAMILY SSF142913 3 206 3.14E-83 T 14-10-2018 MC28_3246 8721282e9a44f3b5938df7f0d5c8c3d6 208 PIRSF PIRSF021332 1 208 6.9E-95 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 MC28_3246 8721282e9a44f3b5938df7f0d5c8c3d6 208 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 8.2E-86 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 MC28_3246 8721282e9a44f3b5938df7f0d5c8c3d6 208 Gene3D G3DSA:3.30.930.20 1 208 8.6E-87 T 14-10-2018 MC28_3246 8721282e9a44f3b5938df7f0d5c8c3d6 208 Hamap MF_01851 UPF0637 protein . 5 205 39.541 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 MC28_3299 de3bb6065c096318d76333ed3acc7786 387 SUPERFAMILY SSF53383 4 383 5.45E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3299 de3bb6065c096318d76333ed3acc7786 387 Gene3D G3DSA:3.40.640.10 58 280 1.3E-126 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3299 de3bb6065c096318d76333ed3acc7786 387 Gene3D G3DSA:3.90.1150.10 29 377 1.3E-126 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3299 de3bb6065c096318d76333ed3acc7786 387 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 230 243 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 MC28_3299 de3bb6065c096318d76333ed3acc7786 387 Pfam PF00155 Aminotransferase class I and II 29 377 1.4E-69 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 Pfam PF03793 PASTA domain 651 703 6.0E-7 T 14-10-2018 IPR005543 PASTA domain MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 Pfam PF03793 PASTA domain 595 646 4.2E-8 T 14-10-2018 IPR005543 PASTA domain MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 Gene3D G3DSA:3.40.710.10 227 578 2.8E-103 T 14-10-2018 MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 Gene3D G3DSA:3.90.1310.10 62 200 1.5E-43 T 14-10-2018 MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 SMART SM00740 651 705 7.8 T 14-10-2018 IPR005543 PASTA domain MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 SMART SM00740 590 649 8.9E-5 T 14-10-2018 IPR005543 PASTA domain MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 Gene3D G3DSA:2.20.70.70 58 219 1.5E-43 T 14-10-2018 MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 SUPERFAMILY SSF56601 184 586 4.1E-93 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 Gene3D G3DSA:3.30.70.2110 81 156 1.5E-43 T 14-10-2018 MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 SUPERFAMILY SSF54184 650 703 7.98E-11 T 14-10-2018 MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 SUPERFAMILY SSF54184 590 648 7.98E-12 T 14-10-2018 MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 559 9.2E-82 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 SUPERFAMILY SSF56519 59 233 2.35E-40 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_3138 a25aa80e54b73e217d2c66fe4baf97c6 716 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 213 1.2E-22 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_F075 acf787cb3ebda140d9691c1065cc160d 412 Gene3D G3DSA:3.40.50.300 2 136 4.1E-10 T 14-10-2018 MC28_F075 acf787cb3ebda140d9691c1065cc160d 412 Gene3D G3DSA:3.40.50.300 186 322 1.4E-14 T 14-10-2018 MC28_F075 acf787cb3ebda140d9691c1065cc160d 412 SMART SM00382 23 317 3.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_F075 acf787cb3ebda140d9691c1065cc160d 412 SUPERFAMILY SSF52540 1 324 9.91E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F075 acf787cb3ebda140d9691c1065cc160d 412 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 26 303 2.1E-20 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_3852 61ae229658a51ef01d55a09302983729 118 Gene3D G3DSA:1.10.720.90 2 55 1.3E-26 T 14-10-2018 MC28_3852 61ae229658a51ef01d55a09302983729 118 Pfam PF00453 Ribosomal protein L20 3 109 1.2E-50 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3852 61ae229658a51ef01d55a09302983729 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.563 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3852 61ae229658a51ef01d55a09302983729 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 4.0E-14 T 14-10-2018 MC28_3852 61ae229658a51ef01d55a09302983729 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3852 61ae229658a51ef01d55a09302983729 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.8E-51 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3852 61ae229658a51ef01d55a09302983729 118 SUPERFAMILY SSF74731 2 116 1.2E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3852 61ae229658a51ef01d55a09302983729 118 Gene3D G3DSA:1.10.1900.20 56 118 2.4E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3852 61ae229658a51ef01d55a09302983729 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.5E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3852 61ae229658a51ef01d55a09302983729 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.5E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3852 61ae229658a51ef01d55a09302983729 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.5E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4940 dd54a393472be115d652d6df88ce5db9 338 SUPERFAMILY SSF89392 29 206 1.41E-17 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX MC28_4940 dd54a393472be115d652d6df88ce5db9 338 Gene3D G3DSA:2.50.20.10 24 221 5.1E-11 T 14-10-2018 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 Gene3D G3DSA:3.40.50.20 1 123 4.2E-37 T 14-10-2018 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 Pfam PF01820 D-ala D-ala ligase N-terminus 5 124 5.8E-31 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 Gene3D G3DSA:3.30.470.20 223 361 1.1E-50 T 14-10-2018 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 SUPERFAMILY SSF52440 3 134 2.01E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_4934 766f2d054baf2be57ba184610968fcd0 361 Pfam PF07478 D-ala D-ala ligase C-terminus 143 344 4.5E-81 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 Gene3D G3DSA:3.30.1490.20 150 222 1.6E-30 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 102 113 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 348 41.853 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 347 5.7E-116 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 290 318 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 PIRSF PIRSF039102 1 356 6.1E-117 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4934 766f2d054baf2be57ba184610968fcd0 361 SUPERFAMILY SSF56059 135 351 5.83E-62 T 14-10-2018 MC28_E158 f704df94247faff72e3919cb33759902 466 SMART SM00148 55 202 9.4E-10 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_E158 f704df94247faff72e3919cb33759902 466 SUPERFAMILY SSF51695 48 353 1.67E-49 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_E158 f704df94247faff72e3919cb33759902 466 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 83 200 3.9E-9 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_2254 f214cd116e857d5eb1bc3a28b4c6d402 256 Gene3D G3DSA:1.25.40.290 126 245 2.4E-31 T 14-10-2018 MC28_2254 f214cd116e857d5eb1bc3a28b4c6d402 256 Pfam PF08713 DNA alkylation repair enzyme 16 239 2.6E-10 T 14-10-2018 IPR014825 DNA alkylation repair enzyme MC28_2254 f214cd116e857d5eb1bc3a28b4c6d402 256 SUPERFAMILY SSF48371 39 246 3.34E-45 T 14-10-2018 IPR016024 Armadillo-type fold MC28_3389 4c9a3dfeccf79e75fe9a2b75e942c23f 304 SUPERFAMILY SSF51430 1 298 2.62E-77 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_3389 4c9a3dfeccf79e75fe9a2b75e942c23f 304 Pfam PF00248 Aldo/keto reductase family 15 295 3.0E-64 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_3389 4c9a3dfeccf79e75fe9a2b75e942c23f 304 Gene3D G3DSA:3.20.20.100 1 296 5.8E-106 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_3389 4c9a3dfeccf79e75fe9a2b75e942c23f 304 PRINTS PR00069 Aldo-keto reductase signature 37 61 8.1E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_3389 4c9a3dfeccf79e75fe9a2b75e942c23f 304 PRINTS PR00069 Aldo-keto reductase signature 103 121 8.1E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_3389 4c9a3dfeccf79e75fe9a2b75e942c23f 304 PRINTS PR00069 Aldo-keto reductase signature 134 151 8.1E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4630 1264c56d640e91d40931ddafaeeb423b 97 Pfam PF12823 Domain of unknown function (DUF3817) 7 93 8.3E-21 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane MC28_4630 1264c56d640e91d40931ddafaeeb423b 97 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 10 92 1.4E-26 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane MC28_4116 c984271747f8cb0bfbda7e0569ca8b9d 256 SMART SM00382 33 221 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4116 c984271747f8cb0bfbda7e0569ca8b9d 256 Pfam PF00005 ABC transporter 24 172 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4116 c984271747f8cb0bfbda7e0569ca8b9d 256 SUPERFAMILY SSF52540 4 228 3.44E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4116 c984271747f8cb0bfbda7e0569ca8b9d 256 Gene3D G3DSA:3.40.50.300 1 249 2.6E-65 T 14-10-2018 MC28_G200 7b22f29774aef976f47c5eeeb8fd0dac 283 Gene3D G3DSA:3.40.50.300 2 69 9.1E-6 T 14-10-2018 MC28_G200 7b22f29774aef976f47c5eeeb8fd0dac 283 SUPERFAMILY SSF52540 4 207 4.39E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G200 7b22f29774aef976f47c5eeeb8fd0dac 283 SUPERFAMILY SSF52540 4 46 5.67E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4467 51e6fb48f41124d0034e3497685b798e 294 Pfam PF01063 Amino-transferase class IV 39 259 1.8E-46 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 MC28_4467 51e6fb48f41124d0034e3497685b798e 294 SUPERFAMILY SSF56752 26 282 1.83E-75 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 MC28_4467 51e6fb48f41124d0034e3497685b798e 294 ProSitePatterns PS00770 Aminotransferases class-IV signature. 187 216 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 MC28_4467 51e6fb48f41124d0034e3497685b798e 294 Gene3D G3DSA:3.20.10.10 134 289 8.6E-57 T 14-10-2018 MC28_4467 51e6fb48f41124d0034e3497685b798e 294 Gene3D G3DSA:3.30.470.10 5 127 6.1E-30 T 14-10-2018 MC28_4467 51e6fb48f41124d0034e3497685b798e 294 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 11 286 5.4E-101 T 14-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 MC28_2225 f3c3ffe13389e209d47fee300b5de27b 142 SUPERFAMILY SSF46785 21 140 4.97E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2225 f3c3ffe13389e209d47fee300b5de27b 142 Pfam PF01047 MarR family 33 89 1.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2225 f3c3ffe13389e209d47fee300b5de27b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 3.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2225 f3c3ffe13389e209d47fee300b5de27b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 3.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2225 f3c3ffe13389e209d47fee300b5de27b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 3.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2225 f3c3ffe13389e209d47fee300b5de27b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 3.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2225 f3c3ffe13389e209d47fee300b5de27b 142 SMART SM00347 25 125 5.5E-26 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2225 f3c3ffe13389e209d47fee300b5de27b 142 Gene3D G3DSA:1.10.10.10 6 142 2.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0208 cfc81410a3f1594f29a60d85c8754c3f 297 SUPERFAMILY SSF48452 111 272 8.6E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0208 cfc81410a3f1594f29a60d85c8754c3f 297 Pfam PF12844 Helix-turn-helix domain 9 67 1.8E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0208 cfc81410a3f1594f29a60d85c8754c3f 297 SMART SM00530 9 63 2.5E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0208 cfc81410a3f1594f29a60d85c8754c3f 297 Gene3D G3DSA:1.25.40.10 1 297 1.1E-82 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0208 cfc81410a3f1594f29a60d85c8754c3f 297 SUPERFAMILY SSF47413 5 65 1.42E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_D141 f76f4e017507cec3205d4e1f701538c4 183 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 156 7.4E-32 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase MC28_1127 781c8780c63024041bcbcb3195989d54 200 SUPERFAMILY SSF55469 7 200 1.06E-65 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_1127 781c8780c63024041bcbcb3195989d54 200 Gene3D G3DSA:3.40.109.10 5 200 2.8E-79 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_1127 781c8780c63024041bcbcb3195989d54 200 Pfam PF00881 Nitroreductase family 12 179 1.9E-22 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.2E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.2E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.2E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.2E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 39.434 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 SMART SM00840 353 416 2.0E-15 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 Pfam PF09190 DALR domain 353 413 1.3E-14 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 SUPERFAMILY SSF47323 317 464 5.76E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 313 8.0E-138 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 Gene3D G3DSA:3.40.50.620 1 305 1.6E-137 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 SUPERFAMILY SSF52374 4 314 2.36E-104 T 14-10-2018 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 464 2.9E-191 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 MC28_4802 87ae1825d27f8f39b0c2fb53d84236df 465 Gene3D G3DSA:1.20.120.640 306 464 8.1E-35 T 14-10-2018 MC28_F278 aa87b4b00cc6a87703d74e593c51596f 316 Pfam PF01609 Transposase DDE domain 2 224 6.2E-32 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_F278 aa87b4b00cc6a87703d74e593c51596f 316 SUPERFAMILY SSF53098 15 309 3.68E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_3793 c92bfe5ad0f092acaa967f0c8de43240 148 SUPERFAMILY SSF54637 14 146 1.5E-32 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_3793 c92bfe5ad0f092acaa967f0c8de43240 148 Gene3D G3DSA:3.10.129.10 6 148 2.2E-33 T 14-10-2018 MC28_3793 c92bfe5ad0f092acaa967f0c8de43240 148 Pfam PF03061 Thioesterase superfamily 33 118 7.3E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 MC28_4979 043ab0fa23832d69c3deaea2116386f0 314 Gene3D G3DSA:3.90.25.10 174 300 7.4E-73 T 14-10-2018 MC28_4979 043ab0fa23832d69c3deaea2116386f0 314 Gene3D G3DSA:3.40.50.720 7 239 7.4E-73 T 14-10-2018 MC28_4979 043ab0fa23832d69c3deaea2116386f0 314 SUPERFAMILY SSF51735 2 309 7.35E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4979 043ab0fa23832d69c3deaea2116386f0 314 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 300 2.1E-35 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_4621 7720eec1f2151343a49da4ca577f54c0 247 SUPERFAMILY SSF54909 1 246 2.47E-94 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_4621 7720eec1f2151343a49da4ca577f54c0 247 Gene3D G3DSA:3.30.70.1030 1 136 3.2E-55 T 14-10-2018 MC28_4621 7720eec1f2151343a49da4ca577f54c0 247 Pfam PF06778 Chlorite dismutase 33 235 1.7E-76 T 14-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase MC28_4621 7720eec1f2151343a49da4ca577f54c0 247 Hamap MF_01442 Putative heme-dependent peroxidase . 1 247 57.474 T 14-10-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family MC28_4621 7720eec1f2151343a49da4ca577f54c0 247 Gene3D G3DSA:3.30.70.1100 137 247 9.6E-48 T 14-10-2018 MC28_3669 4993c6d75b553f1550f25d1d4c26d545 567 SUPERFAMILY SSF56519 33 217 5.89E-17 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_3669 4993c6d75b553f1550f25d1d4c26d545 567 Gene3D G3DSA:3.90.1310.30 33 218 1.1E-9 T 14-10-2018 MC28_3669 4993c6d75b553f1550f25d1d4c26d545 567 Pfam PF00905 Penicillin binding protein transpeptidase domain 246 557 2.7E-49 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_3669 4993c6d75b553f1550f25d1d4c26d545 567 Gene3D G3DSA:3.40.710.10 220 567 3.9E-65 T 14-10-2018 MC28_3669 4993c6d75b553f1550f25d1d4c26d545 567 SUPERFAMILY SSF56601 171 563 1.13E-55 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1746 a486f16f4b0a3cfdd9dd769dbc0c4562 167 Gene3D G3DSA:3.40.630.30 1 167 1.7E-39 T 14-10-2018 MC28_1746 a486f16f4b0a3cfdd9dd769dbc0c4562 167 SUPERFAMILY SSF55729 2 159 5.41E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1746 a486f16f4b0a3cfdd9dd769dbc0c4562 167 Pfam PF13420 Acetyltransferase (GNAT) domain 2 151 3.1E-13 T 14-10-2018 MC28_1080 59ff63fbf389298fdcca0dfae5802bcd 460 Gene3D G3DSA:3.40.50.1820 174 437 3.0E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1080 59ff63fbf389298fdcca0dfae5802bcd 460 Pfam PF12697 Alpha/beta hydrolase family 194 424 4.9E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1080 59ff63fbf389298fdcca0dfae5802bcd 460 SUPERFAMILY SSF53474 144 457 3.88E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 PIRSF PIRSF000429 1 393 5.3E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 Gene3D G3DSA:3.40.47.10 5 276 1.8E-149 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 Pfam PF00108 Thiolase, N-terminal domain 5 263 1.6E-98 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 2.6E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 SUPERFAMILY SSF53901 4 269 4.97E-85 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 SUPERFAMILY SSF53901 271 392 3.93E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 5.4E-142 T 14-10-2018 IPR002155 Thiolase GO:0016747 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 Gene3D G3DSA:3.40.47.10 126 390 1.8E-149 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 MC28_4580 c5feea7bbe516c162d318c2b616ad4ea 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 MC28_2999 c13f79cdc107e9b4b373404b3dc878f8 555 Pfam PF03354 Phage Terminase 66 540 1.2E-42 T 14-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type MC28_2999 c13f79cdc107e9b4b373404b3dc878f8 555 Gene3D G3DSA:3.40.50.300 18 239 2.1E-12 T 14-10-2018 MC28_0700 5cbb4f8de43bd2e75e996575393136b9 859 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 17 297 7.4E-18 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD MC28_0700 5cbb4f8de43bd2e75e996575393136b9 859 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 200 302 5.9E-16 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD MC28_0700 5cbb4f8de43bd2e75e996575393136b9 859 SUPERFAMILY SSF55729 656 833 1.19E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_0700 5cbb4f8de43bd2e75e996575393136b9 859 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 545 836 5.3E-93 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal MC28_D142 faab8cd21edbf4795030788d0bb15e3a 341 Gene3D G3DSA:3.90.580.10 8 98 3.2E-5 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 MC28_D142 faab8cd21edbf4795030788d0bb15e3a 341 Pfam PF13155 Toprim-like 215 318 7.3E-13 T 14-10-2018 MC28_D142 faab8cd21edbf4795030788d0bb15e3a 341 SUPERFAMILY SSF57783 11 92 7.14E-13 T 14-10-2018 MC28_D142 faab8cd21edbf4795030788d0bb15e3a 341 Pfam PF13154 Protein of unknown function (DUF3991) 129 185 2.2E-13 T 14-10-2018 IPR025054 Domain of unknown function DUF3991 MC28_G214 41ea2d031dbd2ba2161f948914017fc0 110 SUPERFAMILY SSF55331 1 108 7.33E-35 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily MC28_G214 41ea2d031dbd2ba2161f948914017fc0 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 107 6.2E-31 T 14-10-2018 IPR015017 Protein of unknown function DUF1904 MC28_G214 41ea2d031dbd2ba2161f948914017fc0 110 Gene3D G3DSA:3.30.429.10 1 108 1.5E-37 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily MC28_4338 d7535756d9f2965726034fb5887f690e 118 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 112 1.4E-24 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MC28_4338 d7535756d9f2965726034fb5887f690e 118 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 117 19.1 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MC28_4338 d7535756d9f2965726034fb5887f690e 118 TIGRFAM TIGR00494 crcB: protein CrcB 5 114 6.3E-26 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MC28_4436 ce60721f0acf52eaf575864a5d2a4b74 245 SUPERFAMILY SSF88713 40 229 5.68E-51 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_4436 ce60721f0acf52eaf575864a5d2a4b74 245 Pfam PF01522 Polysaccharide deacetylase 42 154 5.7E-26 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_4436 ce60721f0acf52eaf575864a5d2a4b74 245 Gene3D G3DSA:3.20.20.370 27 236 1.9E-56 T 14-10-2018 MC28_5105 2339ea4825b580278d2f0f1c704bd1aa 106 Gene3D G3DSA:3.30.70.930 1 106 2.3E-49 T 14-10-2018 IPR029756 MTH1187/YkoF-like MC28_5105 2339ea4825b580278d2f0f1c704bd1aa 106 Pfam PF01910 Thiamine-binding protein 7 96 9.9E-30 T 14-10-2018 IPR002767 Thiamine-binding protein MC28_5105 2339ea4825b580278d2f0f1c704bd1aa 106 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 7 93 3.1E-16 T 14-10-2018 IPR002767 Thiamine-binding protein MC28_5105 2339ea4825b580278d2f0f1c704bd1aa 106 SUPERFAMILY SSF89957 3 104 1.83E-31 T 14-10-2018 IPR029756 MTH1187/YkoF-like MC28_4022 c47a2ba1dfe0b64b5d56a01762e5203d 165 Gene3D G3DSA:3.30.70.1450 85 161 9.1E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_4022 c47a2ba1dfe0b64b5d56a01762e5203d 165 Pfam PF02080 TrkA-C domain 89 158 1.2E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 MC28_4022 c47a2ba1dfe0b64b5d56a01762e5203d 165 PIRSF PIRSF005028 1 162 6.3E-52 T 14-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT MC28_4022 c47a2ba1dfe0b64b5d56a01762e5203d 165 SUPERFAMILY SSF116726 69 156 2.88E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_1260 36c846e311c48f1c51101df3b235a1e6 313 Gene3D G3DSA:1.20.58.340 257 313 3.9E-12 T 14-10-2018 MC28_1260 36c846e311c48f1c51101df3b235a1e6 313 Gene3D G3DSA:1.20.58.340 133 255 5.3E-30 T 14-10-2018 MC28_1260 36c846e311c48f1c51101df3b235a1e6 313 Pfam PF01544 CorA-like Mg2+ transporter protein 21 311 6.5E-66 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 MC28_1260 36c846e311c48f1c51101df3b235a1e6 313 SUPERFAMILY SSF143865 1 248 1.09E-56 T 14-10-2018 MC28_1260 36c846e311c48f1c51101df3b235a1e6 313 SUPERFAMILY SSF144083 249 310 1.83E-15 T 14-10-2018 MC28_1260 36c846e311c48f1c51101df3b235a1e6 313 Gene3D G3DSA:3.30.460.20 6 132 3.9E-26 T 14-10-2018 MC28_1020 1bba00c6b4ee558f771c15a5b91399d2 284 Gene3D G3DSA:3.30.460.10 19 140 4.0E-12 T 14-10-2018 MC28_1020 1bba00c6b4ee558f771c15a5b91399d2 284 SUPERFAMILY SSF81301 23 88 1.84E-7 T 14-10-2018 MC28_1020 1bba00c6b4ee558f771c15a5b91399d2 284 Pfam PF13228 Domain of unknown function (DUF4037) 135 224 1.2E-12 T 14-10-2018 IPR025117 Domain of unknown function DUF4037 MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 129 148 2.9E-17 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 91 2.9E-17 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 2.9E-17 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 170 1.4E-50 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 ProSitePatterns PS00501 Signal peptidases I serine active site. 37 44 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 Pfam PF00717 Peptidase S24-like 34 103 9.4E-20 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 SUPERFAMILY SSF51306 29 176 1.44E-47 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 ProSitePatterns PS00761 Signal peptidases I signature 3. 134 147 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 ProSitePatterns PS00760 Signal peptidases I lysine active site. 81 93 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 MC28_2260 9d3d644759b7fdf5cb10ada2d3c30af9 177 Gene3D G3DSA:2.10.109.10 58 176 3.1E-34 T 14-10-2018 MC28_3407 ceecae56f9c574448ed718609f35e0ad 332 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 237 326 1.7E-14 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 MC28_3407 ceecae56f9c574448ed718609f35e0ad 332 SMART SM00729 61 269 1.2E-35 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_3407 ceecae56f9c574448ed718609f35e0ad 332 SUPERFAMILY SSF102114 23 328 8.37E-74 T 14-10-2018 MC28_3407 ceecae56f9c574448ed718609f35e0ad 332 SMART SM00876 237 327 2.3E-36 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 MC28_3407 ceecae56f9c574448ed718609f35e0ad 332 Pfam PF04055 Radical SAM superfamily 70 226 3.1E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_3407 ceecae56f9c574448ed718609f35e0ad 332 TIGRFAM TIGR00433 bioB: biotin synthase 33 326 1.0E-121 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 MC28_3407 ceecae56f9c574448ed718609f35e0ad 332 PIRSF PIRSF001619 4 332 2.1E-125 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 MC28_3407 ceecae56f9c574448ed718609f35e0ad 332 Gene3D G3DSA:3.20.20.70 22 330 2.1E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_3407 ceecae56f9c574448ed718609f35e0ad 332 Hamap MF_01694 Biotin synthase [bioB]. 21 328 40.694 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 MC28_1690 5dd675725d92f20d63c82e173fe74c86 129 Pfam PF06486 Protein of unknown function (DUF1093) 27 115 1.4E-20 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_1690 5dd675725d92f20d63c82e173fe74c86 129 Gene3D G3DSA:2.40.50.480 21 129 9.8E-44 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_1690 5dd675725d92f20d63c82e173fe74c86 129 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 126 4.4E-11 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_1690 5dd675725d92f20d63c82e173fe74c86 129 SUPERFAMILY SSF159121 26 128 2.22E-31 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_1640 c90a704bd4bc2ef90beb981884be5759 298 Pfam PF02517 CAAX protease self-immunity 141 228 1.5E-8 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_1448 cce52386a5d9378e09a7e320df7e89c5 178 SUPERFAMILY SSF52218 1 160 2.17E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_1448 cce52386a5d9378e09a7e320df7e89c5 178 Gene3D G3DSA:3.40.50.360 1 171 1.7E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_1448 cce52386a5d9378e09a7e320df7e89c5 178 Pfam PF03358 NADPH-dependent FMN reductase 1 136 3.4E-32 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 MC28_C087 d4397348227819d5bab1d1de04fd8a45 55 TIGRFAM TIGR03949 bact_IIb_cerein: class IIb bacteriocin, lactobin A/cerein 7B family 9 41 2.0E-7 T 14-10-2018 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family MC28_0068 0d879b6be74f4e4fb5d95b7218c9878e 101 SUPERFAMILY SSF52794 1 98 1.83E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 MC28_0068 0d879b6be74f4e4fb5d95b7218c9878e 101 Gene3D G3DSA:3.40.50.2300 1 101 1.8E-33 T 14-10-2018 MC28_0068 0d879b6be74f4e4fb5d95b7218c9878e 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 2.4E-20 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 MC28_F125 34fba769375720ecf33013984cf4ffc4 762 SMART SM00060 624 697 2.4E-9 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_F125 34fba769375720ecf33013984cf4ffc4 762 Pfam PF03272 Putative mucin or carbohydrate-binding module 495 608 5.6E-28 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_F125 34fba769375720ecf33013984cf4ffc4 762 Gene3D G3DSA:2.60.40.10 622 708 2.1E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_F125 34fba769375720ecf33013984cf4ffc4 762 SUPERFAMILY SSF49265 618 709 9.95E-15 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_F125 34fba769375720ecf33013984cf4ffc4 762 SUPERFAMILY SSF51055 713 745 1.7E-5 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_F125 34fba769375720ecf33013984cf4ffc4 762 SMART SM00495 715 761 0.0032 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 MC28_F125 34fba769375720ecf33013984cf4ffc4 762 Pfam PF00041 Fibronectin type III domain 626 695 1.9E-5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 MC28_F125 34fba769375720ecf33013984cf4ffc4 762 Gene3D G3DSA:2.10.10.20 715 761 5.0E-8 T 14-10-2018 MC28_G036 d493214487c4b89a00e90d4290373192 241 Gene3D G3DSA:3.90.550.10 1 240 9.6E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_G036 d493214487c4b89a00e90d4290373192 241 Pfam PF00535 Glycosyl transferase family 2 3 153 9.4E-20 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_G036 d493214487c4b89a00e90d4290373192 241 SUPERFAMILY SSF53448 2 221 7.8E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_0542 78f3f9427a99887559b0adebe127d4b7 174 Pfam PF09602 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) 1 164 6.6E-64 T 14-10-2018 IPR011728 Polyhydroxyalkanoic acid inclusion protein PhaP MC28_0542 78f3f9427a99887559b0adebe127d4b7 174 TIGRFAM TIGR02131 phaP_Bmeg: polyhydroxyalkanoic acid inclusion protein PhaP 1 164 8.2E-79 T 14-10-2018 IPR011728 Polyhydroxyalkanoic acid inclusion protein PhaP MC28_3359 4400665ab3837e63c5cae6b61fe12df2 336 PIRSF PIRSF011570 1 334 6.1E-163 T 14-10-2018 IPR010894 Stage V sporulation AD MC28_3359 4400665ab3837e63c5cae6b61fe12df2 336 Gene3D G3DSA:3.40.47.40 1 336 1.3E-154 T 14-10-2018 IPR038369 Stage V sporulation AD superfamily MC28_3359 4400665ab3837e63c5cae6b61fe12df2 336 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 4 331 4.2E-161 T 14-10-2018 IPR010894 Stage V sporulation AD MC28_3359 4400665ab3837e63c5cae6b61fe12df2 336 SUPERFAMILY SSF53901 56 308 3.47E-15 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_3359 4400665ab3837e63c5cae6b61fe12df2 336 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 3 331 6.1E-156 T 14-10-2018 IPR010894 Stage V sporulation AD MC28_0163 7e2cd805db38f288766190272bdc1671 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 446 1.3E-82 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_0163 7e2cd805db38f288766190272bdc1671 529 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 90 112 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site MC28_0163 7e2cd805db38f288766190272bdc1671 529 Gene3D G3DSA:3.10.105.10 284 494 9.0E-153 T 14-10-2018 MC28_0163 7e2cd805db38f288766190272bdc1671 529 Gene3D G3DSA:3.90.76.10 74 192 9.0E-153 T 14-10-2018 MC28_0163 7e2cd805db38f288766190272bdc1671 529 PIRSF PIRSF002741 1 525 1.1E-117 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_0163 7e2cd805db38f288766190272bdc1671 529 Gene3D G3DSA:3.40.190.10 48 501 9.0E-153 T 14-10-2018 MC28_0163 7e2cd805db38f288766190272bdc1671 529 SUPERFAMILY SSF53850 38 519 2.53E-122 T 14-10-2018 MC28_0887 442b959ffe323ee5957cb0f161a1235a 122 Gene3D G3DSA:1.20.120.340 1 121 2.4E-14 T 14-10-2018 MC28_0887 442b959ffe323ee5957cb0f161a1235a 122 SUPERFAMILY SSF101116 2 120 1.23E-21 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 MC28_0887 442b959ffe323ee5957cb0f161a1235a 122 Pfam PF02561 Flagellar protein FliS 5 116 2.7E-18 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 MC28_4182 50b557e44af215b79c21d30c4bb29a6d 237 Pfam PF08713 DNA alkylation repair enzyme 8 221 4.0E-71 T 14-10-2018 IPR014825 DNA alkylation repair enzyme MC28_4182 50b557e44af215b79c21d30c4bb29a6d 237 SUPERFAMILY SSF48371 12 222 8.96E-58 T 14-10-2018 IPR016024 Armadillo-type fold MC28_4182 50b557e44af215b79c21d30c4bb29a6d 237 Gene3D G3DSA:1.25.10.90 1 237 2.0E-106 T 14-10-2018 MC28_F180 18e5e37e7e9cff95e92c4b788cb310a1 315 SUPERFAMILY SSF52540 6 236 1.0E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F180 18e5e37e7e9cff95e92c4b788cb310a1 315 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_F180 18e5e37e7e9cff95e92c4b788cb310a1 315 Pfam PF00005 ABC transporter 24 166 5.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_F180 18e5e37e7e9cff95e92c4b788cb310a1 315 Gene3D G3DSA:3.40.50.300 2 247 7.4E-69 T 14-10-2018 MC28_F180 18e5e37e7e9cff95e92c4b788cb310a1 315 SMART SM00382 32 216 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3560 2dee8fb27a4ab37d8f3c67ca6cc0ae67 228 PIRSF PIRSF003107 9 228 4.1E-62 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 MC28_3560 2dee8fb27a4ab37d8f3c67ca6cc0ae67 228 SUPERFAMILY SSF109755 13 225 4.4E-65 T 14-10-2018 MC28_3560 2dee8fb27a4ab37d8f3c67ca6cc0ae67 228 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 15 223 1.9E-70 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 MC28_3560 2dee8fb27a4ab37d8f3c67ca6cc0ae67 228 Pfam PF01895 PhoU domain 28 115 4.0E-21 T 14-10-2018 IPR026022 PhoU domain MC28_3560 2dee8fb27a4ab37d8f3c67ca6cc0ae67 228 Pfam PF01895 PhoU domain 130 214 4.3E-19 T 14-10-2018 IPR026022 PhoU domain MC28_3560 2dee8fb27a4ab37d8f3c67ca6cc0ae67 228 Gene3D G3DSA:1.20.58.220 12 228 2.2E-71 T 14-10-2018 IPR038078 PhoU-like domain superfamily MC28_2716 82b5d7e5021c7dab386f8c6711359b74 338 SUPERFAMILY SSF69572 2 326 1.7E-88 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 MC28_2716 82b5d7e5021c7dab386f8c6711359b74 338 Gene3D G3DSA:3.40.50.720 2 250 6.2E-74 T 14-10-2018 MC28_2716 82b5d7e5021c7dab386f8c6711359b74 338 Pfam PF00899 ThiF family 5 241 1.6E-60 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MC28_0270 41b81bf58100286951b76ebb262873fa 177 SUPERFAMILY SSF88659 115 177 8.41E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_0270 41b81bf58100286951b76ebb262873fa 177 SUPERFAMILY SSF88946 12 101 3.02E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0270 41b81bf58100286951b76ebb262873fa 177 Gene3D G3DSA:1.10.10.10 99 177 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0270 41b81bf58100286951b76ebb262873fa 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 174 4.7E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_0270 41b81bf58100286951b76ebb262873fa 177 Gene3D G3DSA:1.10.1740.10 1 98 1.2E-24 T 14-10-2018 MC28_0270 41b81bf58100286951b76ebb262873fa 177 Pfam PF04542 Sigma-70 region 2 23 84 1.3E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0270 41b81bf58100286951b76ebb262873fa 177 Pfam PF08281 Sigma-70, region 4 121 171 4.9E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_2914 5e2ed1572a27f2e6a5c3188d0220e8ca 230 Gene3D G3DSA:3.40.50.1820 1 229 1.5E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2914 5e2ed1572a27f2e6a5c3188d0220e8ca 230 SUPERFAMILY SSF53474 9 227 3.33E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2914 5e2ed1572a27f2e6a5c3188d0220e8ca 230 PRINTS PR00111 Alpha/beta hydrolase fold signature 69 82 6.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2914 5e2ed1572a27f2e6a5c3188d0220e8ca 230 PRINTS PR00111 Alpha/beta hydrolase fold signature 172 186 6.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2914 5e2ed1572a27f2e6a5c3188d0220e8ca 230 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 68 6.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2914 5e2ed1572a27f2e6a5c3188d0220e8ca 230 PRINTS PR00111 Alpha/beta hydrolase fold signature 10 25 6.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2914 5e2ed1572a27f2e6a5c3188d0220e8ca 230 Pfam PF12146 Serine aminopeptidase, S33 9 214 1.5E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 MC28_2624 d1acc246e4e58a85b6901fc85479a387 254 Pfam PF05675 Protein of unknown function (DUF817) 6 240 5.4E-104 T 14-10-2018 IPR008535 Protein of unknown function DUF817 MC28_2624 d1acc246e4e58a85b6901fc85479a387 254 PIRSF PIRSF009141 1 254 1.4E-125 T 14-10-2018 IPR008535 Protein of unknown function DUF817 MC28_2735 5f40e3915496c733fdade44c3c080756 564 Gene3D G3DSA:3.10.105.10 307 533 5.8E-185 T 14-10-2018 MC28_2735 5f40e3915496c733fdade44c3c080756 564 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 96 479 4.0E-77 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_2735 5f40e3915496c733fdade44c3c080756 564 SUPERFAMILY SSF53850 49 559 1.1E-127 T 14-10-2018 MC28_2735 5f40e3915496c733fdade44c3c080756 564 Gene3D G3DSA:3.90.76.10 85 207 5.8E-185 T 14-10-2018 MC28_2735 5f40e3915496c733fdade44c3c080756 564 Gene3D G3DSA:3.40.190.10 66 550 5.8E-185 T 14-10-2018 MC28_2735 5f40e3915496c733fdade44c3c080756 564 PIRSF PIRSF002741 3 563 3.2E-101 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_5425 78c68aeecf557f23d90c65eb4ed22478 103 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 13 103 4.1E-38 T 14-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 MC28_5425 78c68aeecf557f23d90c65eb4ed22478 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 92 1.1E-12 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 MC28_C034 790bef2e3869adf4f6d8d68a6985af94 355 Gene3D G3DSA:3.10.450.540 250 355 7.1E-14 T 14-10-2018 MC28_C034 790bef2e3869adf4f6d8d68a6985af94 355 Pfam PF12642 Conjugative transposon protein TcpC 117 350 5.4E-39 T 14-10-2018 IPR024735 Conjugative transposon protein TcpC MC28_0650 d6434c03b4561cf85fda63301cff40ea 339 Gene3D G3DSA:3.20.20.140 58 333 3.5E-57 T 14-10-2018 MC28_0650 d6434c03b4561cf85fda63301cff40ea 339 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 64 302 1.2E-28 T 14-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 MC28_0650 d6434c03b4561cf85fda63301cff40ea 339 SUPERFAMILY SSF89550 66 329 1.1E-35 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 MC28_3249 ba38782bb73edf38a579aee854c80717 276 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 1 247 55.277 T 14-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 MC28_3249 ba38782bb73edf38a579aee854c80717 276 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 24 238 5.0E-123 T 14-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 MC28_2478 6073edd40c45a16252eee7677b219fc5 240 SUPERFAMILY SSF55729 92 236 4.06E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2478 6073edd40c45a16252eee7677b219fc5 240 Gene3D G3DSA:3.40.630.30 4 190 3.5E-7 T 14-10-2018 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 Gene3D G3DSA:1.10.220.30 2 87 1.3E-16 T 14-10-2018 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 333 4.2E-68 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 SUPERFAMILY SSF48029 8 112 2.35E-15 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 114 137 3.4E-40 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 195 220 3.4E-40 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 226 246 3.4E-40 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 273 299 3.4E-40 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 5 21 3.4E-40 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 34 60 3.4E-40 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 Pfam PF14842 FliG N-terminal domain 5 101 2.0E-16 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 Pfam PF01706 FliG C-terminal domain 218 324 8.3E-31 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 Gene3D G3DSA:1.10.220.30 102 194 7.2E-22 T 14-10-2018 MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 Pfam PF14841 FliG middle domain 118 186 2.6E-18 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 SUPERFAMILY SSF48029 115 326 4.97E-49 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical MC28_0893 169313fe2ac7f7af006dff3229dd5ab1 334 Gene3D G3DSA:1.10.220.30 196 334 4.6E-36 T 14-10-2018 MC28_4816 7eb49f0238059255e1cd17c914022595 82 SUPERFAMILY SSF55315 4 81 1.22E-16 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like MC28_4816 7eb49f0238059255e1cd17c914022595 82 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 4 81 7.7E-12 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 MC28_4816 7eb49f0238059255e1cd17c914022595 82 Gene3D G3DSA:3.30.1330.30 1 81 4.8E-18 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 Gene3D G3DSA:3.90.79.10 237 363 4.6E-27 T 14-10-2018 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 176 9.4E-21 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 Pfam PF14815 NUDIX domain 243 356 1.7E-19 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 SMART SM00478 46 197 3.1E-55 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 199 215 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 SMART SM00525 198 218 0.0011 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 SUPERFAMILY SSF48150 11 229 3.3E-75 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 13 282 8.2E-110 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 Gene3D G3DSA:1.10.1670.10 17 220 9.7E-89 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 SUPERFAMILY SSF55811 236 358 5.62E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 Gene3D G3DSA:1.10.340.30 28 139 9.7E-89 T 14-10-2018 MC28_5247 66cc7af0da65ead21f13f242db5c9cb7 365 Pfam PF00633 Helix-hairpin-helix motif 107 135 1.6E-5 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 MC28_4640 36dc25869274b2c423dd95df16309e13 409 Pfam PF00654 Voltage gated chloride channel 62 398 3.8E-41 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 MC28_4640 36dc25869274b2c423dd95df16309e13 409 Gene3D G3DSA:1.10.3080.10 1 401 1.4E-31 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 MC28_4640 36dc25869274b2c423dd95df16309e13 409 SUPERFAMILY SSF81340 8 399 2.22E-52 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 MC28_2590 6e4e9739c82acfd81211252653fda456 111 PIRSF PIRSF036521 19 110 8.6E-9 T 14-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related MC28_2590 6e4e9739c82acfd81211252653fda456 111 SUPERFAMILY SSF101386 19 110 1.2E-18 T 14-10-2018 MC28_2590 6e4e9739c82acfd81211252653fda456 111 Gene3D G3DSA:1.10.287.1080 18 111 2.5E-20 T 14-10-2018 MC28_2590 6e4e9739c82acfd81211252653fda456 111 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 46 109 9.3E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core MC28_D083 e936089784f9c3a3ecf966c88b29a58b 101 ProDom PD284279 PLASMID PXO2-34/BXB0033/GBAA_PXO2_0033 3 99 4.0E-44 T 14-10-2018 IPR020270 Uncharacterised protein family, plasmid pXO2-34 MC28_D083 e936089784f9c3a3ecf966c88b29a58b 101 Pfam PF17362 Family of unknown function 19 96 3.2E-23 T 14-10-2018 IPR020270 Uncharacterised protein family, plasmid pXO2-34 MC28_F224 3d50c180129a3322d46c32d4277701b1 118 Gene3D G3DSA:2.40.50.480 28 118 7.1E-21 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_F224 3d50c180129a3322d46c32d4277701b1 118 SUPERFAMILY SSF159121 27 118 7.98E-23 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_F224 3d50c180129a3322d46c32d4277701b1 118 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 2 117 7.0E-15 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_F224 3d50c180129a3322d46c32d4277701b1 118 Pfam PF06486 Protein of unknown function (DUF1093) 33 107 2.6E-11 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_2285 2065f8fbfd681560e727f27d894bac0f 153 ProDom PD091678 YNCE 1 153 4.0E-54 T 14-10-2018 IPR020216 Uncharacterised protein family, YncE MC28_2285 2065f8fbfd681560e727f27d894bac0f 153 Pfam PF10903 Protein of unknown function (DUF2691) 2 152 9.2E-62 T 14-10-2018 IPR020216 Uncharacterised protein family, YncE MC28_0685 0fffb95fea78fa122ebf38d3dba27299 170 Pfam PF00027 Cyclic nucleotide-binding domain 3 79 2.3E-10 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_0685 0fffb95fea78fa122ebf38d3dba27299 170 Gene3D G3DSA:2.60.120.1460 2 168 2.1E-24 T 14-10-2018 MC28_0685 0fffb95fea78fa122ebf38d3dba27299 170 SUPERFAMILY SSF51206 3 113 3.54E-18 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like MC28_0685 0fffb95fea78fa122ebf38d3dba27299 170 SUPERFAMILY SSF46785 121 163 7.56E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3800 08bf0a0c4b511883135eef3bacb74e71 325 SUPERFAMILY SSF52467 198 317 2.29E-48 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_3800 08bf0a0c4b511883135eef3bacb74e71 325 Pfam PF01012 Electron transfer flavoprotein domain 5 179 2.0E-43 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 MC28_3800 08bf0a0c4b511883135eef3bacb74e71 325 Gene3D G3DSA:3.40.50.620 1 193 1.7E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3800 08bf0a0c4b511883135eef3bacb74e71 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 MC28_3800 08bf0a0c4b511883135eef3bacb74e71 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 2.8E-35 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 MC28_3800 08bf0a0c4b511883135eef3bacb74e71 325 PIRSF PIRSF000089 1 323 8.5E-113 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 MC28_3800 08bf0a0c4b511883135eef3bacb74e71 325 Gene3D G3DSA:3.40.50.1220 194 325 6.4E-57 T 14-10-2018 MC28_3800 08bf0a0c4b511883135eef3bacb74e71 325 SUPERFAMILY SSF52402 4 190 2.93E-50 T 14-10-2018 MC28_3800 08bf0a0c4b511883135eef3bacb74e71 325 SMART SM00893 5 195 5.1E-46 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 MC28_5358 853105f692bd95302a3a53981c10f815 374 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 373 2.9E-92 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_5358 853105f692bd95302a3a53981c10f815 374 Gene3D G3DSA:3.30.300.210 222 374 1.9E-21 T 14-10-2018 IPR038501 Spore germination GerAC superfamily MC28_5358 853105f692bd95302a3a53981c10f815 374 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 201 371 1.9E-30 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_F089 932158e5394248c0865d6d5a0396f40a 146 SUPERFAMILY SSF46785 9 140 1.77E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_F089 932158e5394248c0865d6d5a0396f40a 146 SMART SM00347 25 125 4.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_F089 932158e5394248c0865d6d5a0396f40a 146 Gene3D G3DSA:1.10.10.10 1 143 2.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F089 932158e5394248c0865d6d5a0396f40a 146 Pfam PF12802 MarR family 33 88 3.0E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2397 a517e521f7823165e51af69fe7c0a8c5 755 Gene3D G3DSA:1.10.439.10 1 152 4.3E-55 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 MC28_2397 a517e521f7823165e51af69fe7c0a8c5 755 Gene3D G3DSA:1.10.1400.10 510 642 2.7E-171 T 14-10-2018 MC28_2397 a517e521f7823165e51af69fe7c0a8c5 755 SUPERFAMILY SSF56235 13 748 1.39E-231 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_2397 a517e521f7823165e51af69fe7c0a8c5 755 PIRSF PIRSF001227 1 753 1.5E-207 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 MC28_2397 a517e521f7823165e51af69fe7c0a8c5 755 Pfam PF01804 Penicillin amidase 17 745 2.1E-227 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 MC28_2397 a517e521f7823165e51af69fe7c0a8c5 755 Gene3D G3DSA:2.30.120.10 288 361 2.7E-171 T 14-10-2018 MC28_2397 a517e521f7823165e51af69fe7c0a8c5 755 Gene3D G3DSA:3.60.20.10 216 733 2.7E-171 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_4307 fe12135d318cdcd6052a51aa368bc5a0 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_4307 fe12135d318cdcd6052a51aa368bc5a0 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_4307 fe12135d318cdcd6052a51aa368bc5a0 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_4307 fe12135d318cdcd6052a51aa368bc5a0 136 Pfam PF12802 MarR family 35 85 1.6E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_4307 fe12135d318cdcd6052a51aa368bc5a0 136 SMART SM00347 28 125 6.4E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_4307 fe12135d318cdcd6052a51aa368bc5a0 136 Gene3D G3DSA:1.10.10.10 1 136 2.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4307 fe12135d318cdcd6052a51aa368bc5a0 136 SUPERFAMILY SSF46785 5 135 1.29E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2821 02d9cf578e33b3f0adebf7ef71661fd6 335 Pfam PF08378 Nuclease-related domain 147 279 1.6E-7 T 14-10-2018 IPR011528 Nuclease-related domain, NERD MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 441 7.3E-61 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 Gene3D G3DSA:3.40.50.150 142 442 5.1E-86 T 14-10-2018 MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 Pfam PF01029 NusB family 4 125 4.6E-32 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 321 333 2.9E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 238 2.9E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 253 263 2.9E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 371 387 2.9E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 425 442 2.9E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 SUPERFAMILY SSF53335 136 443 4.87E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 Gene3D G3DSA:1.10.940.10 1 140 5.6E-40 T 14-10-2018 IPR035926 NusB-like superfamily MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 SUPERFAMILY SSF48013 2 127 4.45E-39 T 14-10-2018 IPR035926 NusB-like superfamily MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 320 331 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 MC28_3088 29593aebaf11496040b4f78ce2d3cae1 444 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 6 443 4.1E-150 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 MC28_3929 70f8fe6b8b0a5320c012775f9a73b604 317 SUPERFAMILY SSF103481 51 151 1.7E-5 T 14-10-2018 MC28_3929 70f8fe6b8b0a5320c012775f9a73b604 317 Pfam PF00892 EamA-like transporter family 165 301 1.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_3929 70f8fe6b8b0a5320c012775f9a73b604 317 Pfam PF00892 EamA-like transporter family 11 148 6.1E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_3929 70f8fe6b8b0a5320c012775f9a73b604 317 SUPERFAMILY SSF103481 229 306 7.06E-6 T 14-10-2018 MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 8.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 8.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 SUPERFAMILY SSF51735 3 236 7.73E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.0E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 8.0E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 8.0E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 Pfam PF00106 short chain dehydrogenase 3 199 3.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0962 1af5f69424ab360e350c8aa971fbdc15 236 Gene3D G3DSA:3.40.50.720 1 232 8.1E-55 T 14-10-2018 MC28_4547 cf1e8b5bebfc95161e321eb0aabaf5f3 72 SUPERFAMILY SSF81333 2 71 6.28E-21 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily MC28_4547 cf1e8b5bebfc95161e321eb0aabaf5f3 72 ProSitePatterns PS00605 ATP synthase c subunit signature. 35 56 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4547 cf1e8b5bebfc95161e321eb0aabaf5f3 72 Gene3D G3DSA:1.20.20.10 1 72 1.0E-28 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4547 cf1e8b5bebfc95161e321eb0aabaf5f3 72 Hamap MF_01396 ATP synthase subunit c [atpH]. 5 70 16.107 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4547 cf1e8b5bebfc95161e321eb0aabaf5f3 72 Pfam PF00137 ATP synthase subunit C 6 68 2.1E-15 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 MC28_4547 cf1e8b5bebfc95161e321eb0aabaf5f3 72 PRINTS PR00124 ATP synthase C subunit signature 7 26 1.4E-20 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4547 cf1e8b5bebfc95161e321eb0aabaf5f3 72 PRINTS PR00124 ATP synthase C subunit signature 45 70 1.4E-20 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4547 cf1e8b5bebfc95161e321eb0aabaf5f3 72 PRINTS PR00124 ATP synthase C subunit signature 28 43 1.4E-20 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 MC28_4547 cf1e8b5bebfc95161e321eb0aabaf5f3 72 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 16 70 8.9E-24 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MC28_4382 9fe291c8bf54f707278c11b47dedd555 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 1.9E-18 T 14-10-2018 IPR012452 Protein of unknown function DUF1657 MC28_3963 581e31f35c0ec8f7bfbf101de1e2e311 168 SUPERFAMILY SSF55729 10 149 4.46E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3963 581e31f35c0ec8f7bfbf101de1e2e311 168 Pfam PF00583 Acetyltransferase (GNAT) family 28 142 3.0E-14 T 14-10-2018 IPR000182 GNAT domain MC28_3963 581e31f35c0ec8f7bfbf101de1e2e311 168 Gene3D G3DSA:3.40.630.30 7 168 1.3E-42 T 14-10-2018 MC28_3752 a3ece03c74114bcd81b6b8c10720739e 334 Gene3D G3DSA:3.10.350.10 272 334 9.7E-11 T 14-10-2018 IPR036779 LysM domain superfamily MC28_3752 a3ece03c74114bcd81b6b8c10720739e 334 TIGRFAM TIGR02907 spore_VI_D: stage VI sporulation protein D 17 327 8.6E-124 T 14-10-2018 IPR014256 Sporulation stage VI, protein D MC28_3752 a3ece03c74114bcd81b6b8c10720739e 334 Pfam PF01476 LysM domain 285 327 2.6E-7 T 14-10-2018 IPR018392 LysM domain MC28_3752 a3ece03c74114bcd81b6b8c10720739e 334 SMART SM00257 284 327 1.7E-6 T 14-10-2018 IPR018392 LysM domain MC28_3752 a3ece03c74114bcd81b6b8c10720739e 334 SUPERFAMILY SSF54106 283 328 4.58E-10 T 14-10-2018 MC28_2708 3030970699627ac7abd1f71ad1c79cd8 313 SUPERFAMILY SSF103481 214 292 1.03E-6 T 14-10-2018 MC28_2708 3030970699627ac7abd1f71ad1c79cd8 313 Pfam PF00892 EamA-like transporter family 10 150 9.7E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_2708 3030970699627ac7abd1f71ad1c79cd8 313 TIGRFAM TIGR00688 rarD: protein RarD 9 266 4.5E-80 T 14-10-2018 IPR004626 RarD protein GO:0005887 MC28_2708 3030970699627ac7abd1f71ad1c79cd8 313 SUPERFAMILY SSF103481 44 151 6.54E-12 T 14-10-2018 MC28_E182 310e5978f2fecae552ff7f731e21cb44 598 SMART SM00507 499 550 0.0013 T 14-10-2018 IPR003615 HNH nuclease MC28_E182 310e5978f2fecae552ff7f731e21cb44 598 SUPERFAMILY SSF56672 38 402 1.22E-42 T 14-10-2018 MC28_E182 310e5978f2fecae552ff7f731e21cb44 598 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 86 322 3.2E-40 T 14-10-2018 IPR000477 Reverse transcriptase domain MC28_E182 310e5978f2fecae552ff7f731e21cb44 598 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 29 407 1.6E-100 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase MC28_F012 310e5978f2fecae552ff7f731e21cb44 598 SMART SM00507 499 550 0.0013 T 14-10-2018 IPR003615 HNH nuclease MC28_F012 310e5978f2fecae552ff7f731e21cb44 598 SUPERFAMILY SSF56672 38 402 1.22E-42 T 14-10-2018 MC28_F012 310e5978f2fecae552ff7f731e21cb44 598 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 86 322 3.2E-40 T 14-10-2018 IPR000477 Reverse transcriptase domain MC28_F012 310e5978f2fecae552ff7f731e21cb44 598 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 29 407 1.6E-100 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase MC28_2019 290853e40c4afefe93347635c22039dd 520 Pfam PF01235 Sodium:alanine symporter family 73 483 5.3E-153 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2019 290853e40c4afefe93347635c22039dd 520 TIGRFAM TIGR00835 agcS: amino acid carrier protein 37 471 1.5E-143 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2019 290853e40c4afefe93347635c22039dd 520 PRINTS PR00175 Sodium/alanine symporter signature 440 460 2.9E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2019 290853e40c4afefe93347635c22039dd 520 PRINTS PR00175 Sodium/alanine symporter signature 319 337 2.9E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2019 290853e40c4afefe93347635c22039dd 520 PRINTS PR00175 Sodium/alanine symporter signature 228 247 2.9E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2019 290853e40c4afefe93347635c22039dd 520 PRINTS PR00175 Sodium/alanine symporter signature 377 399 2.9E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2019 290853e40c4afefe93347635c22039dd 520 PRINTS PR00175 Sodium/alanine symporter signature 110 132 2.9E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2019 290853e40c4afefe93347635c22039dd 520 PRINTS PR00175 Sodium/alanine symporter signature 200 218 2.9E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2019 290853e40c4afefe93347635c22039dd 520 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 110 125 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4069 6eb405193c6370d80e85d9b27f53d3db 229 Pfam PF00005 ABC transporter 1 137 4.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4069 6eb405193c6370d80e85d9b27f53d3db 229 SUPERFAMILY SSF52540 2 191 5.32E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4069 6eb405193c6370d80e85d9b27f53d3db 229 ProSitePatterns PS00211 ABC transporters family signature. 110 124 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4069 6eb405193c6370d80e85d9b27f53d3db 229 Gene3D G3DSA:3.40.50.300 1 207 1.7E-59 T 14-10-2018 MC28_4069 6eb405193c6370d80e85d9b27f53d3db 229 SMART SM00382 7 186 2.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 24 38 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 407 418 6.1E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 453 465 6.1E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 319 333 6.1E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 394 6.1E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 445 6.1E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 Pfam PF00232 Glycosyl hydrolase family 1 19 488 2.8E-141 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 386 394 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 SUPERFAMILY SSF51445 11 485 4.17E-163 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_0203 1df9b709edcdf99bb2cadb128d991919 493 Gene3D G3DSA:3.20.20.80 16 491 1.7E-158 T 14-10-2018 MC28_3621 13563a27d66df915bb158788788bc705 249 Pfam PF13649 Methyltransferase domain 40 135 3.2E-19 T 14-10-2018 MC28_3621 13563a27d66df915bb158788788bc705 249 Gene3D G3DSA:3.40.50.150 5 245 2.9E-87 T 14-10-2018 MC28_3621 13563a27d66df915bb158788788bc705 249 Gene3D G3DSA:2.20.25.110 143 206 2.9E-87 T 14-10-2018 MC28_3621 13563a27d66df915bb158788788bc705 249 SUPERFAMILY SSF53335 3 247 6.96E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2896 57bbfb5f2dc4a9348be9e11ad2cc042a 100 Gene3D G3DSA:1.20.58.1000 1 99 4.4E-38 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily MC28_2896 57bbfb5f2dc4a9348be9e11ad2cc042a 100 Pfam PF02583 Metal-sensitive transcriptional repressor 16 95 2.3E-32 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 MC28_0159 256597626efa1a87b8776d482e67e62f 312 SUPERFAMILY SSF51197 16 310 2.29E-77 T 14-10-2018 MC28_0159 256597626efa1a87b8776d482e67e62f 312 Pfam PF08943 CsiD 20 310 1.4E-124 T 14-10-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 MC28_0159 256597626efa1a87b8776d482e67e62f 312 Gene3D G3DSA:3.60.130.10 14 312 1.8E-107 T 14-10-2018 MC28_0159 256597626efa1a87b8776d482e67e62f 312 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 25 310 4.0E-91 T 14-10-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 294 1.6E-56 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 Gene3D G3DSA:3.30.390.30 313 399 1.6E-9 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 SUPERFAMILY SSF51905 1 136 1.94E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 Gene3D G3DSA:3.50.50.60 6 301 3.2E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 Gene3D G3DSA:3.50.50.60 113 237 3.2E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.4E-22 T 14-10-2018 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 1.4E-22 T 14-10-2018 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 1.4E-22 T 14-10-2018 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.4E-22 T 14-10-2018 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.4E-22 T 14-10-2018 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 SUPERFAMILY SSF51905 102 303 9.84E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 4.4E-15 T 14-10-2018 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 383 398 4.4E-15 T 14-10-2018 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 4.4E-15 T 14-10-2018 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 4.4E-15 T 14-10-2018 MC28_F054 87f4a3a29b1611a90648abdb32ec8eb3 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 4.4E-15 T 14-10-2018 MC28_1589 b15cc325c0a34ace3284dc70eade0e57 197 SUPERFAMILY SSF54909 1 85 1.45E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_1589 b15cc325c0a34ace3284dc70eade0e57 197 Gene3D G3DSA:3.30.70.100 31 166 2.3E-13 T 14-10-2018 MC28_1589 b15cc325c0a34ace3284dc70eade0e57 197 Pfam PF16291 Domain of unknown function (DUF4937 1 78 2.9E-30 T 14-10-2018 IPR032555 Domain of unknown function DUF4937 MC28_1589 b15cc325c0a34ace3284dc70eade0e57 197 SUPERFAMILY SSF54909 98 164 8.67E-10 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_1589 b15cc325c0a34ace3284dc70eade0e57 197 Pfam PF03992 Antibiotic biosynthesis monooxygenase 104 162 6.0E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 SMART SM00740 586 645 0.11 T 14-10-2018 IPR005543 PASTA domain MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 SMART SM00740 646 701 0.68 T 14-10-2018 IPR005543 PASTA domain MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 Pfam PF03717 Penicillin-binding Protein dimerisation domain 57 207 3.7E-19 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 Pfam PF00905 Penicillin binding protein transpeptidase domain 257 564 1.5E-83 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 Gene3D G3DSA:2.20.70.70 55 212 2.7E-39 T 14-10-2018 MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 SUPERFAMILY SSF56519 56 228 7.85E-38 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 SUPERFAMILY SSF56601 180 584 3.82E-89 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 Gene3D G3DSA:3.30.70.2110 77 151 2.7E-39 T 14-10-2018 MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 Gene3D G3DSA:3.90.1310.10 58 195 2.7E-39 T 14-10-2018 MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 Gene3D G3DSA:3.40.710.10 222 575 2.2E-100 T 14-10-2018 MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 SUPERFAMILY SSF54184 647 699 1.31E-11 T 14-10-2018 MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 Pfam PF03793 PASTA domain 591 641 4.9E-6 T 14-10-2018 IPR005543 PASTA domain MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 Pfam PF03793 PASTA domain 647 699 1.8E-7 T 14-10-2018 IPR005543 PASTA domain MC28_1852 2de6e0487f9e3cac2565ada530f0d0e1 712 SUPERFAMILY SSF54184 586 644 1.15E-10 T 14-10-2018 MC28_3417 3ee7592329b21957edd4c62462375edd 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3417 3ee7592329b21957edd4c62462375edd 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3417 3ee7592329b21957edd4c62462375edd 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3417 3ee7592329b21957edd4c62462375edd 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3417 3ee7592329b21957edd4c62462375edd 156 Gene3D G3DSA:1.10.10.10 8 151 3.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3417 3ee7592329b21957edd4c62462375edd 156 SUPERFAMILY SSF46785 36 151 4.8E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3417 3ee7592329b21957edd4c62462375edd 156 SMART SM00347 37 137 3.2E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3417 3ee7592329b21957edd4c62462375edd 156 Pfam PF01047 MarR family 47 101 4.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0698 77d22991c96ba15545bba5ddc81ea7f2 235 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 233 2.0E-109 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 MC28_0698 77d22991c96ba15545bba5ddc81ea7f2 235 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 MC28_0698 77d22991c96ba15545bba5ddc81ea7f2 235 Gene3D G3DSA:3.40.50.1580 1 235 5.8E-80 T 14-10-2018 MC28_0698 77d22991c96ba15545bba5ddc81ea7f2 235 SUPERFAMILY SSF53167 2 233 2.09E-94 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 MC28_0698 77d22991c96ba15545bba5ddc81ea7f2 235 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 49.161 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 MC28_0698 77d22991c96ba15545bba5ddc81ea7f2 235 Pfam PF01048 Phosphorylase superfamily 16 222 7.8E-44 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 MC28_E092 22607887064fad913ff668cdd5353311 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 8 356 1.1E-62 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_E092 22607887064fad913ff668cdd5353311 366 Pfam PF03845 Spore germination protein 9 325 1.5E-58 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_1238 865dd2c2676d5e4622f30da209834875 333 Gene3D G3DSA:3.20.20.30 1 333 2.9E-97 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_1238 865dd2c2676d5e4622f30da209834875 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 330 3.5E-125 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 MC28_1238 865dd2c2676d5e4622f30da209834875 333 Pfam PF00296 Luciferase-like monooxygenase 3 301 4.5E-32 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MC28_1238 865dd2c2676d5e4622f30da209834875 333 SUPERFAMILY SSF51679 2 329 4.12E-71 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_5084 0492ed29024a325295801f5f68a5a8f7 240 PIRSF PIRSF039085 1 240 9.9E-117 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 MC28_5084 0492ed29024a325295801f5f68a5a8f7 240 SUPERFAMILY SSF52540 1 235 2.78E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5084 0492ed29024a325295801f5f68a5a8f7 240 Pfam PF00005 ABC transporter 17 165 2.6E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5084 0492ed29024a325295801f5f68a5a8f7 240 Gene3D G3DSA:3.40.50.300 1 239 1.6E-77 T 14-10-2018 MC28_5084 0492ed29024a325295801f5f68a5a8f7 240 SMART SM00382 26 213 1.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5084 0492ed29024a325295801f5f68a5a8f7 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 SUPERFAMILY SSF51569 2 289 6.18E-102 T 14-10-2018 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 SMART SM01130 3 291 6.5E-137 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 8.9E-107 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 PIRSF PIRSF001365 1 292 1.1E-96 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 5.9E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 5.9E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 5.9E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 5.9E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 62.973 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 289 2.7E-108 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 MC28_2968 ec10ab8bae7025f1c926b849edf818c4 292 Gene3D G3DSA:3.20.20.70 1 292 1.2E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_5443 e739ac9b0925b5feeb22c2c6978a95b1 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 291 9.7E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_5443 e739ac9b0925b5feeb22c2c6978a95b1 306 Gene3D G3DSA:1.10.3720.10 56 291 2.9E-31 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5443 e739ac9b0925b5feeb22c2c6978a95b1 306 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 8 286 3.2E-81 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 MC28_5443 e739ac9b0925b5feeb22c2c6978a95b1 306 SUPERFAMILY SSF161098 16 275 1.39E-39 T 14-10-2018 IPR035906 MetI-like superfamily MC28_F257 01020cf40e7f81dbf2ad1b5a7c01584a 111 SUPERFAMILY SSF82057 39 111 2.11E-28 T 14-10-2018 MC28_F257 01020cf40e7f81dbf2ad1b5a7c01584a 111 Pfam PF08274 PhnA Zinc-Ribbon 4 32 4.1E-17 T 14-10-2018 IPR013987 PhnA protein, N-terminal MC28_F257 01020cf40e7f81dbf2ad1b5a7c01584a 111 SUPERFAMILY SSF57783 3 36 1.39E-14 T 14-10-2018 MC28_F257 01020cf40e7f81dbf2ad1b5a7c01584a 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 110 1.6E-49 T 14-10-2018 IPR004624 PhnA protein MC28_F257 01020cf40e7f81dbf2ad1b5a7c01584a 111 Pfam PF03831 PhnA domain 44 111 1.4E-32 T 14-10-2018 IPR013988 PhnA protein, C-terminal MC28_F257 01020cf40e7f81dbf2ad1b5a7c01584a 111 Gene3D G3DSA:2.30.30.40 42 111 4.2E-34 T 14-10-2018 MC28_F257 01020cf40e7f81dbf2ad1b5a7c01584a 111 Gene3D G3DSA:2.20.25.10 1 41 6.5E-20 T 14-10-2018 MC28_0862 125252fb15ac12e3d93b6554cbe4b531 105 Pfam PF09685 Domain of unknown function (DUF4870) 6 101 6.1E-7 T 14-10-2018 IPR019109 Protein of unknown function DUF4870 MC28_0862 125252fb15ac12e3d93b6554cbe4b531 105 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 1 105 3.0E-52 T 14-10-2018 MC28_1867 b4a72f8799cef78726b0da22d5f1dbdd 272 SUPERFAMILY SSF55729 84 264 6.77E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1867 b4a72f8799cef78726b0da22d5f1dbdd 272 Pfam PF13673 Acetyltransferase (GNAT) domain 155 266 1.3E-11 T 14-10-2018 IPR000182 GNAT domain MC28_1867 b4a72f8799cef78726b0da22d5f1dbdd 272 Gene3D G3DSA:3.40.630.30 49 264 2.9E-21 T 14-10-2018 MC28_4078 ab5ba983ad1db12644a90074f48fc7cf 37 Pfam PF13129 Protein of unknown function (DUF3953) 1 30 5.6E-7 T 14-10-2018 IPR025018 Protein of unknown function DUF3953 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 392 437 6.8E-20 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 SUPERFAMILY SSF56037 343 454 1.23E-18 T 14-10-2018 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 Pfam PF09179 TilS substrate binding domain 265 333 3.7E-7 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 Pfam PF01171 PP-loop family 29 212 4.1E-58 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 Pfam PF11734 TilS substrate C-terminal domain 392 456 9.6E-15 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 Gene3D G3DSA:1.20.59.30 253 340 1.5E-30 T 14-10-2018 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 29 216 2.4E-59 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 SUPERFAMILY SSF82829 223 332 2.33E-11 T 14-10-2018 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 SUPERFAMILY SSF52402 16 246 3.84E-60 T 14-10-2018 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 13 328 25.502 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 SMART SM00977 392 464 6.7E-23 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MC28_4777 73181bc353f2742e615b4bc9aea83950 480 Gene3D G3DSA:3.40.50.620 15 246 6.3E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3672 0a53848358d4bec9f5c42f951e7466b7 426 ProSitePatterns PS01276 Peptidase family U32 signature. 177 195 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 MC28_3672 0a53848358d4bec9f5c42f951e7466b7 426 Gene3D G3DSA:2.40.30.10 336 423 3.4E-39 T 14-10-2018 MC28_3672 0a53848358d4bec9f5c42f951e7466b7 426 Pfam PF01136 Peptidase family U32 91 325 3.8E-84 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 MC28_3672 0a53848358d4bec9f5c42f951e7466b7 426 Pfam PF16325 Peptidase family U32 C-terminal domain 340 421 1.5E-26 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal MC28_1262 a6cf93cb079acfc826fdbd56e821cf78 289 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 19 283 4.6E-68 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 MC28_1262 a6cf93cb079acfc826fdbd56e821cf78 289 Pfam PF09323 Domain of unknown function (DUF1980) 1 193 6.5E-66 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 MC28_1018 9bc82cb0d9721ed21f3e865faecb3594 305 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 304 7.6E-127 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 MC28_1018 9bc82cb0d9721ed21f3e865faecb3594 305 Gene3D G3DSA:3.40.50.1100 45 144 1.1E-118 T 14-10-2018 MC28_1018 9bc82cb0d9721ed21f3e865faecb3594 305 SUPERFAMILY SSF53686 2 303 1.26E-99 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_1018 9bc82cb0d9721ed21f3e865faecb3594 305 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 304 2.0E-134 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 MC28_1018 9bc82cb0d9721ed21f3e865faecb3594 305 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 MC28_1018 9bc82cb0d9721ed21f3e865faecb3594 305 Gene3D G3DSA:3.40.50.1100 6 300 1.1E-118 T 14-10-2018 MC28_1018 9bc82cb0d9721ed21f3e865faecb3594 305 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 292 5.6E-68 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_3030 db88db59813bb4597f07edc63087b453 271 SUPERFAMILY SSF88713 54 266 1.16E-63 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_3030 db88db59813bb4597f07edc63087b453 271 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 1 266 1.7E-152 T 14-10-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY MC28_3030 db88db59813bb4597f07edc63087b453 271 Gene3D G3DSA:3.20.20.370 32 269 5.2E-62 T 14-10-2018 MC28_3030 db88db59813bb4597f07edc63087b453 271 Pfam PF01522 Polysaccharide deacetylase 78 196 5.0E-31 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_3807 cd5105864c7e03225c714145cc12fe7f 678 Gene3D G3DSA:1.10.3470.10 8 336 1.3E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3807 cd5105864c7e03225c714145cc12fe7f 678 SUPERFAMILY SSF81345 351 672 6.93E-79 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3807 cd5105864c7e03225c714145cc12fe7f 678 Gene3D G3DSA:1.10.3470.10 353 677 5.1E-90 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3807 cd5105864c7e03225c714145cc12fe7f 678 SUPERFAMILY SSF81345 5 329 7.19E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3807 cd5105864c7e03225c714145cc12fe7f 678 Pfam PF01032 FecCD transport family 364 672 1.2E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_3807 cd5105864c7e03225c714145cc12fe7f 678 Pfam PF01032 FecCD transport family 20 329 5.6E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 SUPERFAMILY SSF48403 25 223 3.8E-52 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 PRINTS PR01415 Ankyrin repeat signature 184 198 5.9E-6 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 PRINTS PR01415 Ankyrin repeat signature 64 79 5.9E-6 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 SMART SM00248 96 125 110.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 SMART SM00248 63 92 4.4E-6 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 SMART SM00248 163 197 0.31 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 SMART SM00248 30 59 5.4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 SMART SM00248 129 159 290.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 Gene3D G3DSA:1.25.40.20 29 225 1.3E-54 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 PIRSF PIRSF000654 124 225 4.7E-11 T 14-10-2018 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 PIRSF PIRSF000654 15 129 4.7E-15 T 14-10-2018 MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 Pfam PF12796 Ankyrin repeats (3 copies) 103 199 1.2E-11 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain MC28_3950 a15eb973c3d11f8b9012557753a3c1d2 226 Pfam PF12796 Ankyrin repeats (3 copies) 14 94 5.9E-12 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain MC28_3564 e7e4eee475ca361edf3a7fd4a10cf24b 284 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 267 4.7E-80 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 MC28_3564 e7e4eee475ca361edf3a7fd4a10cf24b 284 Gene3D G3DSA:3.40.190.10 13 265 1.2E-78 T 14-10-2018 MC28_3564 e7e4eee475ca361edf3a7fd4a10cf24b 284 SUPERFAMILY SSF53850 11 280 2.02E-63 T 14-10-2018 MC28_3564 e7e4eee475ca361edf3a7fd4a10cf24b 284 Gene3D G3DSA:3.40.190.10 92 228 1.2E-78 T 14-10-2018 MC28_3564 e7e4eee475ca361edf3a7fd4a10cf24b 284 Pfam PF12849 PBP superfamily domain 10 250 4.6E-24 T 14-10-2018 IPR024370 PBP domain MC28_0708 d562bfd0fa47839564908f29c3d41875 173 Hamap MF_01319 Thiol-disulfide oxidoreductase ResA [resA]. 1 173 46.544 T 14-10-2018 IPR023555 Thiol-disulphide oxidoreductase ResA GO:0005886|GO:0015036|GO:0017004 MC28_0708 d562bfd0fa47839564908f29c3d41875 173 Gene3D G3DSA:3.40.30.10 28 173 4.5E-53 T 14-10-2018 MC28_0708 d562bfd0fa47839564908f29c3d41875 173 Pfam PF00578 AhpC/TSA family 37 153 1.3E-36 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 MC28_0708 d562bfd0fa47839564908f29c3d41875 173 SUPERFAMILY SSF52833 8 170 5.13E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_1717 fd11296eab983549409d8cd2d3516524 367 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 356 4.7E-61 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_1717 fd11296eab983549409d8cd2d3516524 367 Pfam PF03845 Spore germination protein 9 323 2.5E-57 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_C068 8e4e1b8f8eb7e57a20e2675c31059e47 466 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 83 200 3.5E-10 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_C068 8e4e1b8f8eb7e57a20e2675c31059e47 466 SMART SM00148 55 202 1.4E-9 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_C068 8e4e1b8f8eb7e57a20e2675c31059e47 466 SUPERFAMILY SSF51695 48 353 4.03E-52 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_3197 141511835638bf6b92bb5457010bd844 92 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 47 5.9E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_3197 141511835638bf6b92bb5457010bd844 92 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 49 1.3E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_3197 141511835638bf6b92bb5457010bd844 92 Gene3D G3DSA:2.10.260.10 1 52 1.8E-21 T 14-10-2018 MC28_3197 141511835638bf6b92bb5457010bd844 92 SUPERFAMILY SSF89447 1 52 2.49E-14 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily MC28_3197 141511835638bf6b92bb5457010bd844 92 SMART SM00966 8 51 7.1E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_4912 4a9df8c3bdf50504a5b5aa6b877c09c3 549 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 213 474 4.2E-68 T 14-10-2018 IPR018763 Protein of unknown function DUF2334 MC28_4912 4a9df8c3bdf50504a5b5aa6b877c09c3 549 SUPERFAMILY SSF88713 209 404 1.0E-8 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_3675 ba1c4b93a7f61a18189caa56203c0843 356 Gene3D G3DSA:1.10.8.1150 43 117 6.6E-24 T 14-10-2018 MC28_3675 ba1c4b93a7f61a18189caa56203c0843 356 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 13 355 3.7E-98 T 14-10-2018 IPR003770 Endolytic murein transglycosylase MC28_3675 ba1c4b93a7f61a18189caa56203c0843 356 Pfam PF02618 YceG-like family 49 349 8.5E-78 T 14-10-2018 IPR003770 Endolytic murein transglycosylase MC28_3675 ba1c4b93a7f61a18189caa56203c0843 356 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 15 355 32.78 T 14-10-2018 IPR003770 Endolytic murein transglycosylase MC28_2071 b431f0589530fc3d7dc789597e5426da 579 SUPERFAMILY SSF53850 133 578 7.42E-70 T 14-10-2018 MC28_2071 b431f0589530fc3d7dc789597e5426da 579 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 106 7.4E-22 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain MC28_2071 b431f0589530fc3d7dc789597e5426da 579 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 180 499 1.3E-34 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_2071 b431f0589530fc3d7dc789597e5426da 579 Gene3D G3DSA:3.10.105.10 358 549 7.8E-12 T 14-10-2018 MC28_2071 b431f0589530fc3d7dc789597e5426da 579 Gene3D G3DSA:3.40.190.10 137 357 3.1E-39 T 14-10-2018 MC28_2071 b431f0589530fc3d7dc789597e5426da 579 PIRSF PIRSF002741 129 579 1.9E-42 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_0522 6862dcaa11deba1cdae54d8f55c0ca03 307 Pfam PF00849 RNA pseudouridylate synthase 93 246 1.1E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_0522 6862dcaa11deba1cdae54d8f55c0ca03 307 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 136 150 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_0522 6862dcaa11deba1cdae54d8f55c0ca03 307 Gene3D G3DSA:3.30.2350.10 85 306 9.3E-64 T 14-10-2018 MC28_0522 6862dcaa11deba1cdae54d8f55c0ca03 307 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 301 1.1E-72 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_0522 6862dcaa11deba1cdae54d8f55c0ca03 307 SUPERFAMILY SSF55120 80 302 2.08E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_1894 7fcc51f6e0de2e7fa59b6d183c9036db 400 Gene3D G3DSA:3.40.50.1820 150 396 3.5E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1894 7fcc51f6e0de2e7fa59b6d183c9036db 400 SUPERFAMILY SSF81296 22 145 7.7E-22 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_1894 7fcc51f6e0de2e7fa59b6d183c9036db 400 Pfam PF00756 Putative esterase 173 392 2.6E-33 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 MC28_1894 7fcc51f6e0de2e7fa59b6d183c9036db 400 SUPERFAMILY SSF53474 156 393 1.79E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4938 309bc99ee12e8d0d19b237a12247910b 190 Pfam PF01694 Rhomboid family 43 183 3.8E-30 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 MC28_4938 309bc99ee12e8d0d19b237a12247910b 190 SUPERFAMILY SSF144091 13 183 9.16E-36 T 14-10-2018 MC28_4938 309bc99ee12e8d0d19b237a12247910b 190 Gene3D G3DSA:1.20.1540.10 3 187 3.6E-34 T 14-10-2018 IPR035952 Rhomboid-like superfamily MC28_2322 da4fec96e3d026ea871ffab9e6a8299c 270 PIRSF PIRSF005355 1 269 3.7E-75 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 MC28_2322 da4fec96e3d026ea871ffab9e6a8299c 270 Pfam PF01040 UbiA prenyltransferase family 8 220 2.5E-34 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 MC28_4327 28745392b8ba373cf3799098def16adc 279 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 129 146 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_4327 28745392b8ba373cf3799098def16adc 279 PIRSF PIRSF000097 119 275 8.1E-53 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4327 28745392b8ba373cf3799098def16adc 279 PIRSF PIRSF000097 1 124 1.3E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4327 28745392b8ba373cf3799098def16adc 279 Pfam PF00248 Aldo/keto reductase family 30 265 1.1E-50 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_4327 28745392b8ba373cf3799098def16adc 279 Gene3D G3DSA:3.20.20.100 1 279 1.6E-126 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_4327 28745392b8ba373cf3799098def16adc 279 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 43 60 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_4327 28745392b8ba373cf3799098def16adc 279 PRINTS PR00069 Aldo-keto reductase signature 99 117 2.0E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4327 28745392b8ba373cf3799098def16adc 279 PRINTS PR00069 Aldo-keto reductase signature 200 224 2.0E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4327 28745392b8ba373cf3799098def16adc 279 PRINTS PR00069 Aldo-keto reductase signature 39 63 2.0E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4327 28745392b8ba373cf3799098def16adc 279 PRINTS PR00069 Aldo-keto reductase signature 129 146 2.0E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4327 28745392b8ba373cf3799098def16adc 279 PRINTS PR00069 Aldo-keto reductase signature 163 192 2.0E-52 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_4327 28745392b8ba373cf3799098def16adc 279 SUPERFAMILY SSF51430 6 274 5.63E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_4327 28745392b8ba373cf3799098def16adc 279 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 233 248 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 MC28_4158 872ee11c417939af6a8af4b44c70fd1a 201 Pfam PF12389 Camelysin metallo-endopeptidase 2 199 7.2E-82 T 14-10-2018 IPR022121 Peptidase M73, camelysin MC28_4158 872ee11c417939af6a8af4b44c70fd1a 201 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 13 44 1.2E-9 T 14-10-2018 IPR023833 Signal peptide, camelysin MC28_4334 eeacf7525737e7738a419d9cfb0d6a45 131 SUPERFAMILY SSF82199 12 113 1.96E-23 T 14-10-2018 MC28_4334 eeacf7525737e7738a419d9cfb0d6a45 131 PIRSF PIRSF022536 1 131 2.8E-32 T 14-10-2018 IPR009207 Histone methyltransferase, PBCV type putative KEGG: 00310+2.1.1.43 MC28_4334 eeacf7525737e7738a419d9cfb0d6a45 131 Gene3D G3DSA:2.170.270.10 1 114 4.0E-30 T 14-10-2018 MC28_4334 eeacf7525737e7738a419d9cfb0d6a45 131 Pfam PF00856 SET domain 16 111 5.9E-16 T 14-10-2018 IPR001214 SET domain GO:0005515 MC28_4334 eeacf7525737e7738a419d9cfb0d6a45 131 SMART SM00317 2 117 1.6E-8 T 14-10-2018 IPR001214 SET domain GO:0005515 MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 Gene3D G3DSA:3.40.50.12740 5 213 6.6E-73 T 14-10-2018 MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 SMART SM00421 150 207 1.0E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 SMART SM00448 5 118 1.0E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 SUPERFAMILY SSF46894 140 213 1.02E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 Pfam PF00072 Response regulator receiver domain 7 119 4.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 SUPERFAMILY SSF52172 3 136 3.84E-36 T 14-10-2018 IPR011006 CheY-like superfamily MC28_5362 7d62b12db7b2e87dd2fd022a322fdcc2 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 2.0E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1561 96d12227f336ba8c2e94041278ae9d60 296 SUPERFAMILY SSF51735 2 163 4.27E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1561 96d12227f336ba8c2e94041278ae9d60 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 MC28_1561 96d12227f336ba8c2e94041278ae9d60 296 Gene3D G3DSA:3.40.50.720 1 164 1.3E-54 T 14-10-2018 MC28_1561 96d12227f336ba8c2e94041278ae9d60 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 4.2E-45 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 MC28_1561 96d12227f336ba8c2e94041278ae9d60 296 SUPERFAMILY SSF48179 167 289 3.29E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_1561 96d12227f336ba8c2e94041278ae9d60 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 285 3.0E-31 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 MC28_1561 96d12227f336ba8c2e94041278ae9d60 296 Gene3D G3DSA:1.10.1040.10 166 296 8.8E-42 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_1561 96d12227f336ba8c2e94041278ae9d60 296 PIRSF PIRSF000103 1 294 7.1E-70 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 MC28_2777 6736c61d52429fb778f7812729736f4d 277 SUPERFAMILY SSF47413 15 81 1.71E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2777 6736c61d52429fb778f7812729736f4d 277 Pfam PF01381 Helix-turn-helix 24 76 9.4E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_2777 6736c61d52429fb778f7812729736f4d 277 Gene3D G3DSA:1.10.260.40 12 79 3.6E-24 T 14-10-2018 MC28_2777 6736c61d52429fb778f7812729736f4d 277 SMART SM00530 21 76 2.4E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_D189 5eb095067ac1563f34152f4d2f9a1271 308 Pfam PF13614 AAA domain 5 169 7.3E-37 T 14-10-2018 IPR025669 AAA domain MC28_D189 5eb095067ac1563f34152f4d2f9a1271 308 SUPERFAMILY SSF52540 5 267 2.21E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_D189 5eb095067ac1563f34152f4d2f9a1271 308 Gene3D G3DSA:3.40.50.300 1 270 8.0E-56 T 14-10-2018 MC28_4004 a17c607d52ea7905175fc1541f56ba76 339 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 8 339 1.2E-120 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4004 a17c607d52ea7905175fc1541f56ba76 339 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 318 6.9E-39 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4004 a17c607d52ea7905175fc1541f56ba76 339 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 22 33 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4004 a17c607d52ea7905175fc1541f56ba76 339 Pfam PF04055 Radical SAM superfamily 21 182 5.0E-30 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_4004 a17c607d52ea7905175fc1541f56ba76 339 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 7 339 40.901 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4004 a17c607d52ea7905175fc1541f56ba76 339 Gene3D G3DSA:3.20.20.70 4 339 5.2E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4004 a17c607d52ea7905175fc1541f56ba76 339 SMART SM00729 16 224 1.5E-12 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_4004 a17c607d52ea7905175fc1541f56ba76 339 Pfam PF13353 4Fe-4S single cluster domain 23 97 2.7E-6 T 14-10-2018 MC28_4004 a17c607d52ea7905175fc1541f56ba76 339 SUPERFAMILY SSF102114 9 294 6.41E-82 T 14-10-2018 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Gene3D G3DSA:3.40.50.2300 411 498 2.3E-12 T 14-10-2018 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 SUPERFAMILY SSF63520 189 284 5.89E-13 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 SUPERFAMILY SSF52794 411 491 7.32E-10 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Gene3D G3DSA:1.10.1790.10 305 403 3.6E-21 T 14-10-2018 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 516 650 1.8E-28 T 14-10-2018 IPR002178 PTS EIIA type-2 domain MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Pfam PF05043 Mga helix-turn-helix domain 105 169 3.8E-9 T 14-10-2018 IPR007737 Mga helix-turn-helix domain MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Pfam PF00874 PRD domain 311 400 3.8E-22 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Pfam PF00874 PRD domain 201 283 2.5E-11 T 14-10-2018 IPR011608 PRD domain GO:0006355 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Gene3D G3DSA:1.10.1790.10 189 288 1.5E-8 T 14-10-2018 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 558 574 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 SUPERFAMILY SSF55804 511 651 3.66E-30 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Gene3D G3DSA:1.10.10.10 2 65 6.9E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Gene3D G3DSA:1.10.10.10 82 157 1.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 SUPERFAMILY SSF63520 308 404 6.02E-22 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Gene3D G3DSA:3.40.930.10 513 651 1.2E-29 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 MC28_F235 dc629265362fb5ae5399a6053f6498ac 651 Pfam PF08279 HTH domain 7 63 2.9E-7 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 MC28_1585 ed59a2cc6de5bc616123253729e8a1f9 174 Gene3D G3DSA:1.20.120.450 1 170 4.5E-42 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1585 ed59a2cc6de5bc616123253729e8a1f9 174 Pfam PF05163 DinB family 5 170 4.6E-34 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB MC28_1585 ed59a2cc6de5bc616123253729e8a1f9 174 SUPERFAMILY SSF109854 7 165 1.61E-27 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1122 9b9b075c76c25a9303dab37e60423eda 206 Pfam PF07987 Domain of unkown function (DUF1775) 28 147 1.0E-19 T 14-10-2018 IPR012533 YcnI-like MC28_1122 9b9b075c76c25a9303dab37e60423eda 206 Gene3D G3DSA:2.60.40.2230 25 168 1.3E-32 T 14-10-2018 IPR038507 YcnI-like superfamily MC28_G226 3398a4d5b2476b1abe07dd0da73f8391 148 SUPERFAMILY SSF51283 11 147 3.4E-35 T 14-10-2018 IPR036157 dUTPase-like superfamily MC28_G226 3398a4d5b2476b1abe07dd0da73f8391 148 Pfam PF00692 dUTPase 14 146 1.7E-21 T 14-10-2018 IPR029054 dUTPase-like MC28_G226 3398a4d5b2476b1abe07dd0da73f8391 148 Gene3D G3DSA:2.70.40.10 3 147 1.1E-46 T 14-10-2018 IPR036157 dUTPase-like superfamily MC28_G226 3398a4d5b2476b1abe07dd0da73f8391 148 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 146 3.5E-33 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 MC28_4894 f7aedd34cac3c5e55f803e8927947cea 556 Gene3D G3DSA:3.40.190.10 65 544 5.4E-176 T 14-10-2018 MC28_4894 f7aedd34cac3c5e55f803e8927947cea 556 SUPERFAMILY SSF53850 44 551 5.43E-121 T 14-10-2018 MC28_4894 f7aedd34cac3c5e55f803e8927947cea 556 Gene3D G3DSA:3.10.105.10 305 527 5.4E-176 T 14-10-2018 MC28_4894 f7aedd34cac3c5e55f803e8927947cea 556 PIRSF PIRSF002741 8 556 2.6E-105 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_4894 f7aedd34cac3c5e55f803e8927947cea 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 475 1.9E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_4894 f7aedd34cac3c5e55f803e8927947cea 556 Gene3D G3DSA:3.90.76.10 84 205 5.4E-176 T 14-10-2018 MC28_2814 e3b90d35892e1c7ee935854a83979582 139 Hamap MF_01143 Holin-like protein CidA [cidA]. 19 136 23.782 T 14-10-2018 IPR023760 Holin-like protein CidA GO:0016021 MC28_2814 e3b90d35892e1c7ee935854a83979582 139 Pfam PF03788 LrgA family 36 127 1.7E-29 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 MC28_1409 af62e16c3cddf0ddfbb382d1d70fbe31 310 SUPERFAMILY SSF56112 20 260 4.08E-33 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_1409 af62e16c3cddf0ddfbb382d1d70fbe31 310 Gene3D G3DSA:3.90.1200.10 100 289 1.3E-22 T 14-10-2018 MC28_1409 af62e16c3cddf0ddfbb382d1d70fbe31 310 Pfam PF01636 Phosphotransferase enzyme family 20 243 5.3E-21 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Gene3D G3DSA:2.20.120.10 185 232 8.1E-7 T 14-10-2018 MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Gene3D G3DSA:2.40.40.10 233 312 5.2E-5 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 SUPERFAMILY SSF50685 267 308 3.42E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Gene3D G3DSA:2.10.270.10 129 184 8.2E-17 T 14-10-2018 MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 SUPERFAMILY SSF69360 36 225 1.02E-48 T 14-10-2018 MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Pfam PF06725 3D domain 267 327 3.3E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Gene3D G3DSA:2.10.270.10 23 128 2.9E-24 T 14-10-2018 MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Pfam PF01473 Putative cell wall binding repeat 99 118 0.0049 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Pfam PF01473 Putative cell wall binding repeat 78 91 0.1 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Pfam PF01473 Putative cell wall binding repeat 120 139 0.41 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Pfam PF01473 Putative cell wall binding repeat 142 155 0.0092 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Pfam PF01473 Putative cell wall binding repeat 56 70 2.4E-4 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Pfam PF01473 Putative cell wall binding repeat 163 178 0.0029 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Pfam PF01473 Putative cell wall binding repeat 184 197 0.047 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3006 985c9dd068f9cc6fb992455875c7daf8 328 Pfam PF01473 Putative cell wall binding repeat 205 221 0.69 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat MC28_3617 7f1f61b859491e1cfcecdcdb5b62af41 693 Gene3D G3DSA:3.60.15.10 418 685 3.4E-73 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3617 7f1f61b859491e1cfcecdcdb5b62af41 693 Pfam PF03772 Competence protein 127 389 7.0E-64 T 14-10-2018 IPR004477 ComEC/Rec2-related protein MC28_3617 7f1f61b859491e1cfcecdcdb5b62af41 693 Pfam PF13567 Domain of unknown function (DUF4131) 1 86 3.7E-14 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 MC28_3617 7f1f61b859491e1cfcecdcdb5b62af41 693 SMART SM00849 429 639 4.0E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3617 7f1f61b859491e1cfcecdcdb5b62af41 693 SUPERFAMILY SSF56281 422 681 8.12E-53 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3617 7f1f61b859491e1cfcecdcdb5b62af41 693 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 2 668 2.9E-123 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 MC28_3617 7f1f61b859491e1cfcecdcdb5b62af41 693 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 148 318 2.4E-35 T 14-10-2018 IPR004477 ComEC/Rec2-related protein MC28_3617 7f1f61b859491e1cfcecdcdb5b62af41 693 Pfam PF00753 Metallo-beta-lactamase superfamily 427 638 7.3E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_0281 35ee6f2dd67c9f18c7317103a3901f42 247 SUPERFAMILY SSF52540 4 231 4.66E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0281 35ee6f2dd67c9f18c7317103a3901f42 247 Gene3D G3DSA:3.40.50.300 3 246 3.9E-65 T 14-10-2018 MC28_0281 35ee6f2dd67c9f18c7317103a3901f42 247 SMART SM00382 29 213 1.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0281 35ee6f2dd67c9f18c7317103a3901f42 247 Pfam PF00005 ABC transporter 20 163 1.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1920 0ddcdce9a3a743da911c27aaeba6b67e 149 SUPERFAMILY SSF55811 5 146 4.33E-18 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_1920 0ddcdce9a3a743da911c27aaeba6b67e 149 Gene3D G3DSA:3.90.79.10 1 148 2.9E-34 T 14-10-2018 MC28_1920 0ddcdce9a3a743da911c27aaeba6b67e 149 Pfam PF00293 NUDIX domain 26 131 2.9E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_3128 47d976d6a423f1fc700597530938efd0 384 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 1.0E-45 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 MC28_3128 47d976d6a423f1fc700597530938efd0 384 Pfam PF12327 FtsZ family, C-terminal domain 222 316 3.7E-32 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal MC28_3128 47d976d6a423f1fc700597530938efd0 384 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 MC28_3128 47d976d6a423f1fc700597530938efd0 384 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 5 337 7.5E-139 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 MC28_3128 47d976d6a423f1fc700597530938efd0 384 SMART SM00864 13 205 1.9E-119 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 Gene3D G3DSA:3.30.1330.20 221 328 1.1E-40 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 Gene3D G3DSA:3.40.50.1440 3 220 3.3E-86 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 SUPERFAMILY SSF55307 204 319 3.66E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 373 39.672 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 MC28_3128 47d976d6a423f1fc700597530938efd0 384 SMART SM00865 207 324 8.1E-52 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 SUPERFAMILY SSF52490 12 208 6.8E-74 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.5E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.5E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.5E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 MC28_3128 47d976d6a423f1fc700597530938efd0 384 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.5E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 MC28_5279 1aa0d9969a468c7378ed5b63978e8d96 524 Gene3D G3DSA:3.30.479.30 77 193 1.4E-36 T 14-10-2018 MC28_5279 1aa0d9969a468c7378ed5b63978e8d96 524 Pfam PF15975 Flotillin 378 471 1.5E-14 T 14-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 MC28_5279 1aa0d9969a468c7378ed5b63978e8d96 524 SMART SM00244 34 203 0.0021 T 14-10-2018 IPR001107 Band 7 domain MC28_5279 1aa0d9969a468c7378ed5b63978e8d96 524 Pfam PF01145 SPFH domain / Band 7 family 28 220 4.2E-23 T 14-10-2018 IPR001107 Band 7 domain MC28_5279 1aa0d9969a468c7378ed5b63978e8d96 524 SUPERFAMILY SSF117892 68 210 1.24E-33 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily MC28_3828 7bd1d3924a90e2593fa80d94222ce686 152 SUPERFAMILY SSF158911 25 150 1.03E-41 T 14-10-2018 IPR037250 NEAT domain superfamily MC28_3828 7bd1d3924a90e2593fa80d94222ce686 152 Pfam PF05031 Iron Transport-associated domain 32 147 2.3E-37 T 14-10-2018 IPR006635 NEAT domain MC28_3828 7bd1d3924a90e2593fa80d94222ce686 152 Gene3D G3DSA:2.60.40.1850 21 151 1.6E-45 T 14-10-2018 MC28_3828 7bd1d3924a90e2593fa80d94222ce686 152 SMART SM00725 33 152 4.1E-33 T 14-10-2018 IPR006635 NEAT domain MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 Pfam PF00271 Helicase conserved C-terminal domain 563 659 1.7E-7 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 SMART SM00490 563 660 8.9E-8 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 SUPERFAMILY SSF52540 208 445 5.4E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 800 24.789 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 Gene3D G3DSA:3.40.50.300 252 447 3.7E-75 T 14-10-2018 MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 Gene3D G3DSA:1.10.8.630 3 115 1.5E-26 T 14-10-2018 MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 Pfam PF04851 Type III restriction enzyme, res subunit 264 428 1.0E-16 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 SMART SM00487 261 460 1.2E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 TIGRFAM TIGR00595 priA: primosomal protein N' 289 797 1.2E-217 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 MC28_3091 87db2b766e4ebd0d0044c50ab8c1ba22 801 SUPERFAMILY SSF52540 529 705 3.8E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1647 9758727c86d5bed69260cfca78636c6c 238 Pfam PF03473 MOSC domain 62 171 5.3E-25 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 MC28_1647 9758727c86d5bed69260cfca78636c6c 238 SUPERFAMILY SSF50800 13 227 8.37E-72 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily MC28_1647 9758727c86d5bed69260cfca78636c6c 238 Pfam PF03475 3-alpha domain 182 223 1.4E-15 T 14-10-2018 IPR005163 3-alpha domain MC28_1647 9758727c86d5bed69260cfca78636c6c 238 Gene3D G3DSA:2.40.33.20 5 238 7.9E-76 T 14-10-2018 MC28_5091 a80fe1c7105b32243b50449e8996fd19 243 SUPERFAMILY SSF46785 164 241 5.07E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5091 a80fe1c7105b32243b50449e8996fd19 243 Gene3D G3DSA:2.60.120.1460 33 242 3.0E-45 T 14-10-2018 MC28_5091 a80fe1c7105b32243b50449e8996fd19 243 SUPERFAMILY SSF51206 37 161 2.49E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like MC28_5091 a80fe1c7105b32243b50449e8996fd19 243 Pfam PF13545 Crp-like helix-turn-helix domain 168 240 3.6E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_5091 a80fe1c7105b32243b50449e8996fd19 243 Pfam PF00027 Cyclic nucleotide-binding domain 48 134 1.2E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_5091 a80fe1c7105b32243b50449e8996fd19 243 SMART SM00419 186 234 2.9E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_5091 a80fe1c7105b32243b50449e8996fd19 243 SMART SM00100 29 147 6.8E-5 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_2080 3b7c7ca03fa4ff5cfed7644528e46d1b 261 Pfam PF08241 Methyltransferase domain 46 142 2.5E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_2080 3b7c7ca03fa4ff5cfed7644528e46d1b 261 Gene3D G3DSA:3.40.50.150 27 261 1.9E-60 T 14-10-2018 MC28_2080 3b7c7ca03fa4ff5cfed7644528e46d1b 261 SUPERFAMILY SSF53335 29 255 9.12E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 1.1E-44 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 72 92 1.1E-44 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 180 200 1.1E-44 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 225 250 1.1E-44 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 222 1.1E-44 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 72 1.1E-44 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 173 185 1.9E-6 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 123 137 1.9E-6 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 111 123 1.9E-6 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 51 60 1.9E-6 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MC28_0911 d1e4bf8911cf02fe9b2cccde852ad1b2 252 Pfam PF00813 FliP family 55 245 1.0E-56 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MC28_0256 5922c200c4ad1913e301e6f2046a0386 314 Hamap MF_01427 3'-5' exoribonuclease YhaM [yhaM]. 1 313 61.942 T 14-10-2018 IPR020873 3'-5' exoribonuclease YhaM GO:0000175 MC28_0256 5922c200c4ad1913e301e6f2046a0386 314 SMART SM00471 156 288 3.8E-6 T 14-10-2018 IPR003607 HD/PDEase domain MC28_0256 5922c200c4ad1913e301e6f2046a0386 314 Gene3D G3DSA:1.10.3210.10 122 290 1.3E-11 T 14-10-2018 MC28_0256 5922c200c4ad1913e301e6f2046a0386 314 Pfam PF01336 OB-fold nucleic acid binding domain 28 89 2.4E-6 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 MC28_0256 5922c200c4ad1913e301e6f2046a0386 314 SUPERFAMILY SSF109604 137 280 1.73E-15 T 14-10-2018 MC28_0256 5922c200c4ad1913e301e6f2046a0386 314 Gene3D G3DSA:2.40.50.140 13 101 1.5E-5 T 14-10-2018 MC28_0256 5922c200c4ad1913e301e6f2046a0386 314 Pfam PF01966 HD domain 161 278 3.4E-10 T 14-10-2018 IPR006674 HD domain MC28_0256 5922c200c4ad1913e301e6f2046a0386 314 SUPERFAMILY SSF50249 31 92 3.03E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_5022 36d6d50ba78e40cfbc534a7680251e65 398 Pfam PF07537 CamS sex pheromone cAM373 precursor 57 390 7.2E-118 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 MC28_5022 36d6d50ba78e40cfbc534a7680251e65 398 PIRSF PIRSF012509 1 398 2.4E-150 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 MC28_5022 36d6d50ba78e40cfbc534a7680251e65 398 Gene3D G3DSA:3.10.570.10 53 398 6.1E-124 T 14-10-2018 MC28_1384 202bc97055489152bd1e667703cfbe8a 258 SUPERFAMILY SSF53335 2 256 1.19E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1384 202bc97055489152bd1e667703cfbe8a 258 Gene3D G3DSA:3.40.50.150 71 255 2.8E-40 T 14-10-2018 MC28_1384 202bc97055489152bd1e667703cfbe8a 258 Pfam PF04445 Putative SAM-dependent methyltransferase 43 250 2.3E-16 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 MC28_2700 57ec3657cd05b8bbb2ae5f4b40f07fc3 310 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 301 4.0E-64 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain MC28_2700 57ec3657cd05b8bbb2ae5f4b40f07fc3 310 SUPERFAMILY SSF53590 1 309 6.93E-80 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_2700 57ec3657cd05b8bbb2ae5f4b40f07fc3 310 Gene3D G3DSA:3.90.245.10 1 310 5.8E-76 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_2265 82b94b72414188f151340443ded67fa9 231 Pfam PF06149 Protein of unknown function (DUF969) 1 216 2.4E-86 T 14-10-2018 IPR010374 Protein of unknown function DUF969 MC28_0839 2867b2c61ec0ca91a80ccd54e203ff40 186 Pfam PF00857 Isochorismatase family 4 140 1.8E-22 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_0839 2867b2c61ec0ca91a80ccd54e203ff40 186 Gene3D G3DSA:3.40.50.850 1 164 3.6E-31 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_0839 2867b2c61ec0ca91a80ccd54e203ff40 186 SUPERFAMILY SSF52499 2 176 3.14E-33 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_2654 b4588b8c22e261d59b67858b9580000f 114 SUPERFAMILY SSF46785 17 99 3.98E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2654 b4588b8c22e261d59b67858b9580000f 114 Pfam PF01022 Bacterial regulatory protein, arsR family 29 77 9.7E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2654 b4588b8c22e261d59b67858b9580000f 114 SMART SM00418 22 101 3.0E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2654 b4588b8c22e261d59b67858b9580000f 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 75 90 9.0E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2654 b4588b8c22e261d59b67858b9580000f 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 9.0E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2654 b4588b8c22e261d59b67858b9580000f 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 9.0E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2654 b4588b8c22e261d59b67858b9580000f 114 Gene3D G3DSA:1.10.10.10 2 108 7.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4484 93254186b7bcfd612e46df5ff2933d25 156 Pfam PF04542 Sigma-70 region 2 27 74 1.1E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_4484 93254186b7bcfd612e46df5ff2933d25 156 Pfam PF04545 Sigma-70, region 4 104 152 9.3E-9 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 MC28_4484 93254186b7bcfd612e46df5ff2933d25 156 SUPERFAMILY SSF88659 86 154 1.63E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_4484 93254186b7bcfd612e46df5ff2933d25 156 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 152 5.3E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_4484 93254186b7bcfd612e46df5ff2933d25 156 Gene3D G3DSA:1.10.1740.10 6 70 9.8E-7 T 14-10-2018 MC28_4484 93254186b7bcfd612e46df5ff2933d25 156 Gene3D G3DSA:1.20.140.160 71 155 2.3E-9 T 14-10-2018 MC28_4484 93254186b7bcfd612e46df5ff2933d25 156 SUPERFAMILY SSF88946 7 73 1.52E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_1726 28557e9e7da8befa0504f7720bd0eb15 317 Pfam PF01061 ABC-2 type transporter 121 280 1.9E-35 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 MC28_2278 d041cd265025ba6b34e734e0bb65f0de 195 Gene3D G3DSA:3.40.630.30 1 189 1.1E-44 T 14-10-2018 MC28_2278 d041cd265025ba6b34e734e0bb65f0de 195 SUPERFAMILY SSF55729 2 173 1.85E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2278 d041cd265025ba6b34e734e0bb65f0de 195 Pfam PF13302 Acetyltransferase (GNAT) domain 7 147 4.1E-19 T 14-10-2018 IPR000182 GNAT domain MC28_1605 3d021985619b9b486f33f21423ea13cb 233 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 2.6E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_1605 3d021985619b9b486f33f21423ea13cb 233 Gene3D G3DSA:2.60.120.1460 19 227 6.4E-37 T 14-10-2018 MC28_1605 3d021985619b9b486f33f21423ea13cb 233 SUPERFAMILY SSF46785 151 226 6.13E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1605 3d021985619b9b486f33f21423ea13cb 233 SMART SM00100 10 133 5.0E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_1605 3d021985619b9b486f33f21423ea13cb 233 Pfam PF13545 Crp-like helix-turn-helix domain 154 224 3.8E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_1605 3d021985619b9b486f33f21423ea13cb 233 SUPERFAMILY SSF51206 21 139 1.19E-24 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like MC28_4150 a0c1571f27175cbda6ed777e71031dd0 260 Pfam PF01987 Mitochondrial biogenesis AIM24 8 225 6.2E-70 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 MC28_4150 a0c1571f27175cbda6ed777e71031dd0 260 SUPERFAMILY SSF51219 6 241 2.62E-84 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily MC28_4150 a0c1571f27175cbda6ed777e71031dd0 260 Gene3D G3DSA:3.60.160.10 1 248 1.7E-104 T 14-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily MC28_4150 a0c1571f27175cbda6ed777e71031dd0 260 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 7 232 3.3E-34 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 MC28_0562 5da980227f1caed769ce291d4395a521 195 SUPERFAMILY SSF54631 2 112 9.73E-19 T 14-10-2018 MC28_0562 5da980227f1caed769ce291d4395a521 195 Pfam PF00571 CBS domain 3 47 3.3E-5 T 14-10-2018 IPR000644 CBS domain MC28_0562 5da980227f1caed769ce291d4395a521 195 PIRSF PIRSF035040 1 195 5.7E-83 T 14-10-2018 IPR017036 Uncharacterised conserved protein UCP035040, CBS-type MC28_0562 5da980227f1caed769ce291d4395a521 195 Gene3D G3DSA:3.10.580.10 1 115 3.9E-17 T 14-10-2018 MC28_2620 54ebc9ad66091e0eeedd87787f31ebc9 183 Gene3D G3DSA:3.40.630.30 2 181 3.0E-38 T 14-10-2018 MC28_2620 54ebc9ad66091e0eeedd87787f31ebc9 183 SUPERFAMILY SSF55729 1 175 1.26E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2620 54ebc9ad66091e0eeedd87787f31ebc9 183 Pfam PF13420 Acetyltransferase (GNAT) domain 19 169 2.8E-14 T 14-10-2018 MC28_1343 819f1507aa002aebbdefa74d4d6e64cc 229 Gene3D G3DSA:1.20.950.20 1 214 1.6E-80 T 14-10-2018 MC28_1343 819f1507aa002aebbdefa74d4d6e64cc 229 SUPERFAMILY SSF103501 1 222 3.01E-68 T 14-10-2018 IPR036197 NarG-like superfamily MC28_1343 819f1507aa002aebbdefa74d4d6e64cc 229 Pfam PF02665 Nitrate reductase gamma subunit 3 222 1.0E-86 T 14-10-2018 IPR023234 NarG-like domain MC28_1343 819f1507aa002aebbdefa74d4d6e64cc 229 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 222 8.5E-84 T 14-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 MC28_3851 8e4da3efd6627f46f4b3473df39cd7b1 163 Gene3D G3DSA:1.10.4010.10 1 163 5.7E-15 T 14-10-2018 MC28_3851 8e4da3efd6627f46f4b3473df39cd7b1 163 Pfam PF08761 dUTPase 2 163 1.9E-52 T 14-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 MC28_3851 8e4da3efd6627f46f4b3473df39cd7b1 163 PIRSF PIRSF030140 1 163 2.1E-59 T 14-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 MC28_3851 8e4da3efd6627f46f4b3473df39cd7b1 163 SUPERFAMILY SSF101386 1 163 6.98E-49 T 14-10-2018 MC28_4952 d10d4bf2b9f0c50d25ecba6290fb20a7 37 Pfam PF14146 Domain of unknown function (DUF4305) 1 28 2.8E-11 T 14-10-2018 IPR025426 Protein of unknown function DUF4305 MC28_5180 d7df2db98c9fe5bf2f42c68c7c07a0d5 279 Pfam PF01391 Collagen triple helix repeat (20 copies) 92 140 1.8E-9 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_5180 d7df2db98c9fe5bf2f42c68c7c07a0d5 279 Gene3D G3DSA:1.20.5.320 112 160 4.2E-5 T 14-10-2018 MC28_5056 46e1ad3695c358eb7b86fafae15cbdbb 473 Pfam PF03553 Na+/H+ antiporter family 158 450 1.4E-62 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 MC28_5056 46e1ad3695c358eb7b86fafae15cbdbb 473 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 455 2.9E-143 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 MC28_4655 bf5ba303a1cacbc67acbacc18e29864e 472 Pfam PF13425 O-antigen ligase like membrane protein 9 471 6.3E-139 T 14-10-2018 MC28_4364 3aa109f35d17fae632528faf26c7aad4 230 Pfam PF04172 LrgB-like family 14 226 2.7E-65 T 14-10-2018 IPR007300 CidB/LrgB family MC28_1263 e50ec2128a64d9f47d99e4b0f3d8c94a 155 Pfam PF03061 Thioesterase superfamily 15 87 6.7E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 MC28_1263 e50ec2128a64d9f47d99e4b0f3d8c94a 155 SUPERFAMILY SSF54637 4 142 3.91E-42 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_1263 e50ec2128a64d9f47d99e4b0f3d8c94a 155 Gene3D G3DSA:3.10.129.10 1 155 4.9E-56 T 14-10-2018 MC28_B45 48099c31bb73a83d0aa9e95550923bd4 112 SUPERFAMILY SSF47413 3 67 5.63E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_B45 48099c31bb73a83d0aa9e95550923bd4 112 SMART SM00530 5 60 2.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_B45 48099c31bb73a83d0aa9e95550923bd4 112 Pfam PF01381 Helix-turn-helix 6 60 1.3E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_B45 48099c31bb73a83d0aa9e95550923bd4 112 Gene3D G3DSA:1.10.260.40 1 107 1.5E-20 T 14-10-2018 MC28_3400 5355e10dc4a4eff437b7b90ade6e0557 81 Pfam PF10827 Protein of unknown function (DUF2552) 1 79 5.0E-44 T 14-10-2018 IPR020157 Uncharacterised protein family YqkC MC28_3400 5355e10dc4a4eff437b7b90ade6e0557 81 ProDom PD058987 CYTOSOLIC YQKC 21 81 2.0E-28 T 14-10-2018 IPR020157 Uncharacterised protein family YqkC MC28_0794 162b25bede7fcc975b77fd77cacbdcd8 379 Pfam PF02926 THUMP domain 20 154 1.7E-16 T 14-10-2018 IPR004114 THUMP domain GO:0003723 MC28_0794 162b25bede7fcc975b77fd77cacbdcd8 379 Gene3D G3DSA:3.40.50.150 161 365 7.5E-122 T 14-10-2018 MC28_0794 162b25bede7fcc975b77fd77cacbdcd8 379 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 14-10-2018 IPR000241 Putative RNA methylase domain MC28_0794 162b25bede7fcc975b77fd77cacbdcd8 379 Gene3D G3DSA:3.30.2130.30 8 246 7.5E-122 T 14-10-2018 MC28_0794 162b25bede7fcc975b77fd77cacbdcd8 379 SUPERFAMILY SSF53335 144 361 1.94E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0794 162b25bede7fcc975b77fd77cacbdcd8 379 Pfam PF01170 Putative RNA methylase family UPF0020 163 367 9.6E-65 T 14-10-2018 IPR000241 Putative RNA methylase domain MC28_0794 162b25bede7fcc975b77fd77cacbdcd8 379 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 MC28_0794 162b25bede7fcc975b77fd77cacbdcd8 379 SMART SM00981 57 155 2.5E-8 T 14-10-2018 IPR004114 THUMP domain GO:0003723 MC28_F179 b07733ab37e821ccab39770ddd04d3ce 340 Gene3D G3DSA:3.20.20.80 1 339 3.2E-9 T 14-10-2018 MC28_F179 b07733ab37e821ccab39770ddd04d3ce 340 Pfam PF14307 Glycosyltransferase WbsX 4 332 4.5E-130 T 14-10-2018 IPR032719 Glycosyltransferase WbsX MC28_4760 b82354171f4715dae69c94abb398701e 285 Gene3D G3DSA:3.30.230.10 1 155 6.9E-61 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_4760 b82354171f4715dae69c94abb398701e 285 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 275 35.228 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 MC28_4760 b82354171f4715dae69c94abb398701e 285 Gene3D G3DSA:3.30.70.890 158 280 8.8E-29 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily MC28_4760 b82354171f4715dae69c94abb398701e 285 SUPERFAMILY SSF54211 1 153 2.73E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_4760 b82354171f4715dae69c94abb398701e 285 Pfam PF08544 GHMP kinases C terminal 197 265 2.5E-8 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain MC28_4760 b82354171f4715dae69c94abb398701e 285 Pfam PF00288 GHMP kinases N terminal domain 83 140 1.7E-14 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 MC28_4760 b82354171f4715dae69c94abb398701e 285 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 281 1.3E-109 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 MC28_4760 b82354171f4715dae69c94abb398701e 285 PIRSF PIRSF010376 1 283 4.0E-99 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 MC28_4760 b82354171f4715dae69c94abb398701e 285 SUPERFAMILY SSF55060 157 277 1.04E-32 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily MC28_2645 4c5eabd13ccd53bc03a9be1017aca32b 375 Pfam PF00144 Beta-lactamase 76 357 3.1E-57 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_2645 4c5eabd13ccd53bc03a9be1017aca32b 375 SUPERFAMILY SSF56601 57 361 5.11E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_2645 4c5eabd13ccd53bc03a9be1017aca32b 375 Gene3D G3DSA:3.40.710.10 62 365 1.8E-78 T 14-10-2018 MC28_4847 004c551526b530070b718685f5a5a1dc 121 PIRSF PIRSF002134 1 121 8.5E-42 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4847 004c551526b530070b718685f5a5a1dc 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.3E-52 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4847 004c551526b530070b718685f5a5a1dc 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.429 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4847 004c551526b530070b718685f5a5a1dc 121 SUPERFAMILY SSF46946 2 120 9.55E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 MC28_4847 004c551526b530070b718685f5a5a1dc 121 Gene3D G3DSA:1.10.8.50 1 71 8.6E-29 T 14-10-2018 MC28_4847 004c551526b530070b718685f5a5a1dc 121 Pfam PF00416 Ribosomal protein S13/S18 61 108 1.7E-17 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4847 004c551526b530070b718685f5a5a1dc 121 Gene3D G3DSA:4.10.910.10 72 121 6.3E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4847 004c551526b530070b718685f5a5a1dc 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_0572 7e270bb1f4ff4f22caa41a8c5bd6171f 163 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 34 158 3.0E-35 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 MC28_0572 7e270bb1f4ff4f22caa41a8c5bd6171f 163 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 34 123 2.0E-30 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 MC28_0572 7e270bb1f4ff4f22caa41a8c5bd6171f 163 SUPERFAMILY SSF55620 29 158 2.33E-37 T 14-10-2018 MC28_0572 7e270bb1f4ff4f22caa41a8c5bd6171f 163 Gene3D G3DSA:3.30.479.10 104 162 1.2E-9 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 MC28_0572 7e270bb1f4ff4f22caa41a8c5bd6171f 163 Gene3D G3DSA:3.30.479.10 29 103 5.9E-23 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 MC28_2104 eaad2430ed9d930a5c833d27f769d80a 370 Gene3D G3DSA:3.20.20.30 1 358 1.2E-145 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_2104 eaad2430ed9d930a5c833d27f769d80a 370 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 370 77.296 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 MC28_2104 eaad2430ed9d930a5c833d27f769d80a 370 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 2.0E-190 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 MC28_2104 eaad2430ed9d930a5c833d27f769d80a 370 SUPERFAMILY SSF51679 1 349 3.14E-100 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_2104 eaad2430ed9d930a5c833d27f769d80a 370 Pfam PF00296 Luciferase-like monooxygenase 1 323 8.6E-92 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MC28_1242 08f3d2f81baf2390d5f254f88c8da36f 300 Pfam PF00248 Aldo/keto reductase family 15 290 3.5E-60 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_1242 08f3d2f81baf2390d5f254f88c8da36f 300 SUPERFAMILY SSF51430 8 295 2.1E-75 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_1242 08f3d2f81baf2390d5f254f88c8da36f 300 Gene3D G3DSA:3.20.20.100 3 300 8.9E-102 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_4502 4832cb8e63ca3a8d3ad0093b5097a2e9 373 Pfam PF00534 Glycosyl transferases group 1 190 350 4.5E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_4502 4832cb8e63ca3a8d3ad0093b5097a2e9 373 Gene3D G3DSA:3.40.50.2000 13 368 4.0E-62 T 14-10-2018 MC28_4502 4832cb8e63ca3a8d3ad0093b5097a2e9 373 Pfam PF13439 Glycosyltransferase Family 4 13 182 5.8E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 MC28_4502 4832cb8e63ca3a8d3ad0093b5097a2e9 373 Gene3D G3DSA:3.40.50.2000 182 358 4.0E-62 T 14-10-2018 MC28_4502 4832cb8e63ca3a8d3ad0093b5097a2e9 373 SUPERFAMILY SSF53756 11 372 3.87E-68 T 14-10-2018 MC28_0330 46d70f41d3059d93889231ab5cb49391 357 SUPERFAMILY SSF56300 134 355 2.36E-32 T 14-10-2018 MC28_0330 46d70f41d3059d93889231ab5cb49391 357 Pfam PF00149 Calcineurin-like phosphoesterase 137 300 1.3E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_0330 46d70f41d3059d93889231ab5cb49391 357 Gene3D G3DSA:3.60.21.10 135 327 3.7E-22 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_4023 494fca6611bd46eae18daf4b86f41a0b 188 Gene3D G3DSA:1.10.443.10 7 174 1.2E-23 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_4023 494fca6611bd46eae18daf4b86f41a0b 188 Pfam PF00589 Phage integrase family 11 172 6.3E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_4023 494fca6611bd46eae18daf4b86f41a0b 188 SUPERFAMILY SSF56349 9 179 4.71E-28 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_4535 13107812810160f646eef146427acf79 415 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 346 401 2.0E-25 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4535 13107812810160f646eef146427acf79 415 Gene3D G3DSA:3.30.460.80 241 392 5.9E-34 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4535 13107812810160f646eef146427acf79 415 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 296 409 2.2E-36 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4535 13107812810160f646eef146427acf79 415 SUPERFAMILY SSF143243 268 412 3.53E-40 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4535 13107812810160f646eef146427acf79 415 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 294 409 1.1E-39 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_2117 e0cde479a3d94465006273b932b396aa 136 SUPERFAMILY SSF55729 49 125 4.8E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2117 e0cde479a3d94465006273b932b396aa 136 Pfam PF13673 Acetyltransferase (GNAT) domain 46 116 2.3E-11 T 14-10-2018 IPR000182 GNAT domain MC28_2117 e0cde479a3d94465006273b932b396aa 136 Gene3D G3DSA:3.40.630.30 5 120 2.1E-12 T 14-10-2018 MC28_3394 51460f9d56b6d6d0652ae4e643325e4d 164 Pfam PF12651 Ribbon-helix-helix domain 112 150 1.6E-9 T 14-10-2018 IPR038733 Predicted DNA-binding protein, ribbon-helix-helix domain MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 ProSitePatterns PS00110 Pyruvate kinase active site signature. 213 225 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 1.9E-155 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 SUPERFAMILY SSF51621 1 340 2.16E-103 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 Gene3D G3DSA:3.20.20.60 2 333 3.1E-195 T 14-10-2018 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 470 2.5E-35 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 SUPERFAMILY SSF52935 321 473 5.76E-42 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 SUPERFAMILY SSF50800 70 165 7.33E-27 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 Gene3D G3DSA:3.50.30.10 474 585 1.7E-33 T 14-10-2018 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 PRINTS PR01050 Pyruvate kinase family signature 267 291 8.3E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 PRINTS PR01050 Pyruvate kinase family signature 215 241 8.3E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 PRINTS PR01050 Pyruvate kinase family signature 242 266 8.3E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.3E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 PRINTS PR01050 Pyruvate kinase family signature 311 327 8.3E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 PRINTS PR01050 Pyruvate kinase family signature 184 198 8.3E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 PRINTS PR01050 Pyruvate kinase family signature 292 310 8.3E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 SUPERFAMILY SSF52009 465 583 1.31E-30 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 Gene3D G3DSA:2.40.33.10 70 166 3.1E-195 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 Pfam PF00391 PEP-utilising enzyme, mobile domain 504 575 6.6E-21 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 1.0E-189 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_3876 66ad475c3377c69982c29a2d5e29d1aa 585 Gene3D G3DSA:3.40.1380.20 334 468 3.1E-195 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 MC28_G219 3ccf9744789a447b192a2e13208e10ff 45 Pfam PF13104 Protein of unknown function (DUF3956) 1 45 8.5E-33 T 14-10-2018 IPR025225 Protein of unknown function DUF3956 MC28_4283 afcafc51c74ef715525b6362fce9e7e2 394 Gene3D G3DSA:1.20.1250.20 7 201 8.7E-27 T 14-10-2018 MC28_4283 afcafc51c74ef715525b6362fce9e7e2 394 Gene3D G3DSA:1.20.1250.20 202 386 4.6E-22 T 14-10-2018 MC28_4283 afcafc51c74ef715525b6362fce9e7e2 394 Pfam PF07690 Major Facilitator Superfamily 12 344 4.0E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_4283 afcafc51c74ef715525b6362fce9e7e2 394 SUPERFAMILY SSF103473 7 381 9.55E-61 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_5324 c68244a927cda27ac38482a6943a248c 419 Gene3D G3DSA:1.25.40.10 166 419 7.0E-54 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_5324 c68244a927cda27ac38482a6943a248c 419 Gene3D G3DSA:1.25.40.1000 65 165 1.0E-55 T 14-10-2018 MC28_5324 c68244a927cda27ac38482a6943a248c 419 SUPERFAMILY SSF48452 227 352 2.62E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_5324 c68244a927cda27ac38482a6943a248c 419 Pfam PF01381 Helix-turn-helix 15 63 5.5E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5324 c68244a927cda27ac38482a6943a248c 419 SMART SM00028 151 184 75.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_5324 c68244a927cda27ac38482a6943a248c 419 SMART SM00028 229 262 24.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_5324 c68244a927cda27ac38482a6943a248c 419 SMART SM00028 308 341 36.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_5324 c68244a927cda27ac38482a6943a248c 419 SMART SM00028 270 303 0.0019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_5324 c68244a927cda27ac38482a6943a248c 419 Gene3D G3DSA:1.10.260.40 4 64 9.6E-13 T 14-10-2018 MC28_5324 c68244a927cda27ac38482a6943a248c 419 SMART SM00530 11 65 1.1E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5324 c68244a927cda27ac38482a6943a248c 419 SUPERFAMILY SSF48452 153 260 7.34E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_5324 c68244a927cda27ac38482a6943a248c 419 SUPERFAMILY SSF47413 7 65 1.1E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_5324 c68244a927cda27ac38482a6943a248c 419 Pfam PF13424 Tetratricopeptide repeat 234 301 4.4E-8 T 14-10-2018 MC28_2267 a67dc16dbb78ecb9ee1e1b2f02c18e1d 329 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 300 2.1E-86 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B MC28_2267 a67dc16dbb78ecb9ee1e1b2f02c18e1d 329 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 324 3.8E-95 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B MC28_2267 a67dc16dbb78ecb9ee1e1b2f02c18e1d 329 SMART SM00797 24 317 2.9E-132 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B MC28_2267 a67dc16dbb78ecb9ee1e1b2f02c18e1d 329 Gene3D G3DSA:2.40.100.10 190 327 7.0E-50 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_2267 a67dc16dbb78ecb9ee1e1b2f02c18e1d 329 SUPERFAMILY SSF50891 193 307 4.17E-13 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_5393 b97a2678aca606179a01c5fce862ea34 215 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 MC28_5393 b97a2678aca606179a01c5fce862ea34 215 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 3.7E-102 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MC28_5393 b97a2678aca606179a01c5fce862ea34 215 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 211 1.1E-55 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 MC28_5393 b97a2678aca606179a01c5fce862ea34 215 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 MC28_5393 b97a2678aca606179a01c5fce862ea34 215 Hamap MF_00494 Probable transaldolase [tal]. 1 214 48.355 T 14-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MC28_5393 b97a2678aca606179a01c5fce862ea34 215 Gene3D G3DSA:3.20.20.70 1 215 6.7E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_5393 b97a2678aca606179a01c5fce862ea34 215 SUPERFAMILY SSF51569 1 212 1.15E-78 T 14-10-2018 MC28_3743 454771cb96d7691d5649f8234988c4b1 264 PIRSF PIRSF038471 1 263 2.1E-60 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 MC28_3743 454771cb96d7691d5649f8234988c4b1 264 Gene3D G3DSA:2.40.10.340 94 165 2.5E-24 T 14-10-2018 MC28_3743 454771cb96d7691d5649f8234988c4b1 264 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 259 8.5E-58 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 MC28_3743 454771cb96d7691d5649f8234988c4b1 264 Pfam PF04085 rod shape-determining protein MreC 103 254 6.7E-42 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 MC28_3743 454771cb96d7691d5649f8234988c4b1 264 Gene3D G3DSA:2.40.10.350 166 242 9.6E-29 T 14-10-2018 MC28_3148 7668ad781ca310abc63e0ee83ee99202 384 Pfam PF01580 FtsK/SpoIIIE family 114 231 5.0E-14 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MC28_3148 7668ad781ca310abc63e0ee83ee99202 384 SUPERFAMILY SSF52540 127 329 8.26E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3148 7668ad781ca310abc63e0ee83ee99202 384 Gene3D G3DSA:3.40.50.300 97 372 3.0E-43 T 14-10-2018 MC28_3914 4b3d75485eb94a3879c62d283c403ea4 144 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_3914 4b3d75485eb94a3879c62d283c403ea4 144 SUPERFAMILY SSF55811 3 122 3.66E-17 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_3914 4b3d75485eb94a3879c62d283c403ea4 144 Gene3D G3DSA:3.90.79.10 3 143 6.7E-21 T 14-10-2018 MC28_3914 4b3d75485eb94a3879c62d283c403ea4 144 Pfam PF00293 NUDIX domain 4 124 9.3E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_0752 b5bbb8479e7f6760963313920f17252f 376 SUPERFAMILY SSF53383 20 364 1.02E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_0752 b5bbb8479e7f6760963313920f17252f 376 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 365 61.323 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 MC28_0752 b5bbb8479e7f6760963313920f17252f 376 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 363 2.6E-111 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 MC28_0752 b5bbb8479e7f6760963313920f17252f 376 Gene3D G3DSA:3.40.640.10 49 273 3.5E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_0752 b5bbb8479e7f6760963313920f17252f 376 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 225 234 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 MC28_0752 b5bbb8479e7f6760963313920f17252f 376 Pfam PF00155 Aminotransferase class I and II 36 358 9.2E-59 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_0752 b5bbb8479e7f6760963313920f17252f 376 Gene3D G3DSA:3.90.1150.10 26 357 3.5E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2913 3d9e383a424df1db8995fdcc2f098b73 185 Gene3D G3DSA:3.40.50.1240 1 182 1.8E-26 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_2913 3d9e383a424df1db8995fdcc2f098b73 185 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 1 172 2.8E-22 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_2913 3d9e383a424df1db8995fdcc2f098b73 185 SUPERFAMILY SSF53254 1 175 2.36E-25 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_1558 0f7539a429a9b93d757eb54ea12abad3 478 SUPERFAMILY SSF103378 11 476 1.7E-159 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 MC28_1558 0f7539a429a9b93d757eb54ea12abad3 478 Pfam PF03972 MmgE/PrpD family 15 461 5.5E-152 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 MC28_1558 0f7539a429a9b93d757eb54ea12abad3 478 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 11 478 6.8E-284 T 14-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 MC28_1558 0f7539a429a9b93d757eb54ea12abad3 478 Gene3D G3DSA:1.10.4100.10 20 456 6.9E-194 T 14-10-2018 MC28_1558 0f7539a429a9b93d757eb54ea12abad3 478 Gene3D G3DSA:3.30.1330.120 283 421 6.9E-194 T 14-10-2018 MC28_2851 47c28955ca40e4fe49bfb2af2480b531 394 SMART SM00710 137 172 3800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat MC28_2851 47c28955ca40e4fe49bfb2af2480b531 394 SMART SM00710 336 358 46.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat MC28_2851 47c28955ca40e4fe49bfb2af2480b531 394 SMART SM00710 183 205 2100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat MC28_2851 47c28955ca40e4fe49bfb2af2480b531 394 SMART SM00710 359 385 14.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat MC28_2851 47c28955ca40e4fe49bfb2af2480b531 394 Gene3D G3DSA:2.160.20.10 215 390 1.7E-5 T 14-10-2018 IPR012334 Pectin lyase fold MC28_2851 47c28955ca40e4fe49bfb2af2480b531 394 SUPERFAMILY SSF51126 60 385 3.71E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor MC28_2851 47c28955ca40e4fe49bfb2af2480b531 394 Gene3D G3DSA:2.160.20.10 59 211 1.4E-8 T 14-10-2018 IPR012334 Pectin lyase fold MC28_0416 c37a75779c491e89f9e8827269de8a14 411 Pfam PF06054 Competence protein CoiA-like family 1 380 5.8E-67 T 14-10-2018 IPR010330 Competence-induced protein CoiA-like MC28_0416 c37a75779c491e89f9e8827269de8a14 411 PIRSF PIRSF007487 1 384 6.9E-101 T 14-10-2018 IPR021176 Competence-induced protein CoiA MC28_2013 7493166c3471edb5a6fb125fc9e50521 221 SUPERFAMILY SSF81296 35 201 1.82E-61 T 14-10-2018 IPR014756 Immunoglobulin E-set MC28_2013 7493166c3471edb5a6fb125fc9e50521 221 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 35 198 1.2E-38 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal MC28_2013 7493166c3471edb5a6fb125fc9e50521 221 Gene3D G3DSA:2.70.50.50 35 201 3.2E-68 T 14-10-2018 MC28_4198 0606a1e67703aacb090194b8310bd188 293 Gene3D G3DSA:1.10.10.10 15 133 1.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4198 0606a1e67703aacb090194b8310bd188 293 Pfam PF13730 Helix-turn-helix domain 34 92 8.5E-12 T 14-10-2018 MC28_4198 0606a1e67703aacb090194b8310bd188 293 SUPERFAMILY SSF46785 65 108 7.75E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1013 10040b276ae4c25d6825a127fd93cb55 424 Pfam PF07690 Major Facilitator Superfamily 46 285 3.6E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1013 10040b276ae4c25d6825a127fd93cb55 424 SUPERFAMILY SSF103473 19 422 5.1E-47 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1013 10040b276ae4c25d6825a127fd93cb55 424 Gene3D G3DSA:1.20.1250.20 18 419 2.4E-40 T 14-10-2018 MC28_0010 d975a84d7e9e0974c37a1cd5d4a21907 369 SUPERFAMILY SSF51905 4 361 4.73E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0010 d975a84d7e9e0974c37a1cd5d4a21907 369 Pfam PF01266 FAD dependent oxidoreductase 6 351 2.9E-74 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MC28_0010 d975a84d7e9e0974c37a1cd5d4a21907 369 Gene3D G3DSA:3.30.9.10 92 311 7.0E-109 T 14-10-2018 MC28_0010 d975a84d7e9e0974c37a1cd5d4a21907 369 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 7 356 3.5E-129 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 MC28_0010 d975a84d7e9e0974c37a1cd5d4a21907 369 Gene3D G3DSA:3.50.50.60 6 352 7.0E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0010 d975a84d7e9e0974c37a1cd5d4a21907 369 SUPERFAMILY SSF54373 226 310 7.32E-19 T 14-10-2018 MC28_2589 cc80a0d58784bd1f9258600936e2edb5 245 Gene3D G3DSA:3.20.20.80 30 245 7.6E-85 T 14-10-2018 MC28_2589 cc80a0d58784bd1f9258600936e2edb5 245 SUPERFAMILY SSF51445 38 240 1.4E-52 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_2589 cc80a0d58784bd1f9258600936e2edb5 245 Pfam PF01183 Glycosyl hydrolases family 25 44 218 2.9E-41 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 MC28_2589 cc80a0d58784bd1f9258600936e2edb5 245 SMART SM00641 41 148 1.4E-19 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup MC28_4440 369c07297748ba1dee62ba8591b7c5ff 235 Gene3D G3DSA:3.20.20.370 2 235 5.0E-79 T 14-10-2018 MC28_4440 369c07297748ba1dee62ba8591b7c5ff 235 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 235 39.944 T 14-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 MC28_4440 369c07297748ba1dee62ba8591b7c5ff 235 Pfam PF04794 YdjC-like protein 4 229 2.7E-60 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like MC28_4440 369c07297748ba1dee62ba8591b7c5ff 235 SUPERFAMILY SSF88713 1 230 2.67E-72 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_1982 252015c25d1eaf3a52e1090520c719f4 144 Pfam PF13673 Acetyltransferase (GNAT) domain 41 142 5.2E-16 T 14-10-2018 IPR000182 GNAT domain MC28_1982 252015c25d1eaf3a52e1090520c719f4 144 SUPERFAMILY SSF55729 10 143 4.29E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1982 252015c25d1eaf3a52e1090520c719f4 144 Gene3D G3DSA:3.40.630.30 2 142 1.2E-38 T 14-10-2018 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 Pfam PF01479 S4 domain 2 48 3.1E-17 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 SMART SM00363 2 59 1.5E-16 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 Gene3D G3DSA:3.30.70.580 64 223 4.3E-56 T 14-10-2018 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 Pfam PF00849 RNA pseudouridylate synthase 62 196 9.8E-23 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 Gene3D G3DSA:3.10.290.10 1 63 2.6E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 SUPERFAMILY SSF55120 61 230 5.52E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 SUPERFAMILY SSF55174 2 67 2.35E-17 T 14-10-2018 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 4.0E-51 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 MC28_0707 32e99ad9cb446ff6d1c1390cf14835a4 242 Gene3D G3DSA:3.30.70.1560 123 215 4.3E-56 T 14-10-2018 MC28_5330 bb082556c6deef16d3186ea732ba2eb3 420 Pfam PF12229 Putative peptidoglycan binding domain 89 200 7.4E-12 T 14-10-2018 IPR022029 Putative peptidoglycan binding domain MC28_5330 bb082556c6deef16d3186ea732ba2eb3 420 Pfam PF04294 VanW like protein 238 366 1.9E-45 T 14-10-2018 IPR007391 Vancomycin resistance VanW MC28_3989 7704a055bd6bbee81b0e2a266df6f7cc 468 Gene3D G3DSA:1.20.1720.10 1 206 1.4E-55 T 14-10-2018 MC28_3989 7704a055bd6bbee81b0e2a266df6f7cc 468 SUPERFAMILY SSF103473 2 461 1.57E-67 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_3989 7704a055bd6bbee81b0e2a266df6f7cc 468 Pfam PF07690 Major Facilitator Superfamily 2 392 2.7E-58 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_3989 7704a055bd6bbee81b0e2a266df6f7cc 468 Gene3D G3DSA:1.20.1250.20 248 468 3.4E-19 T 14-10-2018 MC28_F065 7ca6e455ffff2ca791392dafeeaeed9f 720 Pfam PF00270 DEAD/DEAH box helicase 114 236 1.5E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MC28_F065 7ca6e455ffff2ca791392dafeeaeed9f 720 SMART SM00487 107 274 0.002 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_F065 7ca6e455ffff2ca791392dafeeaeed9f 720 SMART SM00490 348 435 4.3E-10 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_F065 7ca6e455ffff2ca791392dafeeaeed9f 720 Pfam PF00271 Helicase conserved C-terminal domain 354 434 3.2E-9 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_F065 7ca6e455ffff2ca791392dafeeaeed9f 720 Gene3D G3DSA:3.40.50.300 104 252 1.0E-11 T 14-10-2018 MC28_F065 7ca6e455ffff2ca791392dafeeaeed9f 720 SUPERFAMILY SSF52540 274 450 2.1E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F065 7ca6e455ffff2ca791392dafeeaeed9f 720 SUPERFAMILY SSF52540 50 224 2.28E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F065 7ca6e455ffff2ca791392dafeeaeed9f 720 Gene3D G3DSA:3.40.50.300 265 452 5.4E-29 T 14-10-2018 MC28_2036 2478d2aa2b5e0c51fa67674f225cab33 393 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 7 390 6.9E-141 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes MC28_2036 2478d2aa2b5e0c51fa67674f225cab33 393 SUPERFAMILY SSF52266 222 391 7.33E-18 T 14-10-2018 MC28_2036 2478d2aa2b5e0c51fa67674f225cab33 393 Pfam PF04914 DltD protein 41 391 1.4E-124 T 14-10-2018 IPR006998 DltD MC28_2036 2478d2aa2b5e0c51fa67674f225cab33 393 PIRSF PIRSF021438 1 393 2.1E-162 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes MC28_2036 2478d2aa2b5e0c51fa67674f225cab33 393 Gene3D G3DSA:3.40.50.1110 256 393 3.8E-6 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_0419 58f13dd7258102382ad88b4a0ba2bff3 297 Pfam PF13743 Thioredoxin 25 219 7.4E-73 T 14-10-2018 MC28_0419 58f13dd7258102382ad88b4a0ba2bff3 297 SUPERFAMILY SSF52833 22 227 8.15E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_0419 58f13dd7258102382ad88b4a0ba2bff3 297 Gene3D G3DSA:1.10.472.60 62 188 2.0E-23 T 14-10-2018 MC28_0419 58f13dd7258102382ad88b4a0ba2bff3 297 Gene3D G3DSA:3.40.30.10 27 215 2.0E-23 T 14-10-2018 MC28_F178 fe463ba5f4a42661de8a16bfd47aa991 348 SUPERFAMILY SSF140931 88 274 7.32E-28 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_F178 fe463ba5f4a42661de8a16bfd47aa991 348 Gene3D G3DSA:1.10.3290.10 19 291 5.4E-33 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_F178 fe463ba5f4a42661de8a16bfd47aa991 348 Pfam PF02661 Fic/DOC family 108 214 7.6E-16 T 14-10-2018 IPR003812 Fido domain MC28_2415 0954092d01087b3dfd5e6a9b8a7111aa 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_2415 0954092d01087b3dfd5e6a9b8a7111aa 448 Pfam PF00202 Aminotransferase class-III 31 445 4.4E-110 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_2415 0954092d01087b3dfd5e6a9b8a7111aa 448 Gene3D G3DSA:3.40.640.10 68 338 3.2E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_2415 0954092d01087b3dfd5e6a9b8a7111aa 448 Gene3D G3DSA:3.90.1150.10 16 445 3.2E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_2415 0954092d01087b3dfd5e6a9b8a7111aa 448 SUPERFAMILY SSF53383 19 446 3.4E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_2415 0954092d01087b3dfd5e6a9b8a7111aa 448 PIRSF PIRSF000521 8 448 1.8E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MC28_2300 527d1355d64267440ee2b45ae8e261c4 214 Gene3D G3DSA:3.40.50.850 1 209 2.8E-51 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_2300 527d1355d64267440ee2b45ae8e261c4 214 SUPERFAMILY SSF52499 4 204 5.89E-53 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_2300 527d1355d64267440ee2b45ae8e261c4 214 Pfam PF00857 Isochorismatase family 14 165 1.4E-21 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_4654 f1577ea1b436b4b231664e29b4517288 366 Pfam PF00534 Glycosyl transferases group 1 180 327 3.2E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_4654 f1577ea1b436b4b231664e29b4517288 366 Gene3D G3DSA:3.40.50.2000 167 347 6.8E-66 T 14-10-2018 MC28_4654 f1577ea1b436b4b231664e29b4517288 366 Gene3D G3DSA:3.40.50.2000 13 355 6.8E-66 T 14-10-2018 MC28_4654 f1577ea1b436b4b231664e29b4517288 366 SUPERFAMILY SSF53756 40 364 1.99E-72 T 14-10-2018 MC28_4654 f1577ea1b436b4b231664e29b4517288 366 Pfam PF13439 Glycosyltransferase Family 4 13 168 8.0E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 MC28_0916 2bd17b0f7a71a816ab82e5dc4d8ca135 436 SMART SM00382 240 378 5.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0916 2bd17b0f7a71a816ab82e5dc4d8ca135 436 Gene3D G3DSA:1.20.120.1380 187 424 9.4E-52 T 14-10-2018 MC28_0916 2bd17b0f7a71a816ab82e5dc4d8ca135 436 Gene3D G3DSA:3.40.50.300 237 422 9.4E-52 T 14-10-2018 MC28_0916 2bd17b0f7a71a816ab82e5dc4d8ca135 436 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 10 330 1.2E-54 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 MC28_0916 2bd17b0f7a71a816ab82e5dc4d8ca135 436 Pfam PF00448 SRP54-type protein, GTPase domain 243 433 1.6E-39 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_0916 2bd17b0f7a71a816ab82e5dc4d8ca135 436 SMART SM00962 241 434 8.8E-41 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 MC28_0916 2bd17b0f7a71a816ab82e5dc4d8ca135 436 SUPERFAMILY SSF52540 239 420 2.65E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1617 378b11e09a83314cb908e8689869c91b 738 SUPERFAMILY SSF56988 72 334 8.76E-20 T 14-10-2018 MC28_1617 378b11e09a83314cb908e8689869c91b 738 PRINTS PR01391 Binary toxin B family signature 75 92 4.6E-11 T 14-10-2018 IPR003896 Bacterial exotoxin B GO:0005576|GO:0009405 MC28_1617 378b11e09a83314cb908e8689869c91b 738 PRINTS PR01391 Binary toxin B family signature 113 136 4.6E-11 T 14-10-2018 IPR003896 Bacterial exotoxin B GO:0005576|GO:0009405 MC28_1617 378b11e09a83314cb908e8689869c91b 738 PRINTS PR01391 Binary toxin B family signature 257 280 4.6E-11 T 14-10-2018 IPR003896 Bacterial exotoxin B GO:0005576|GO:0009405 MC28_1617 378b11e09a83314cb908e8689869c91b 738 Gene3D G3DSA:2.60.120.240 155 379 5.2E-40 T 14-10-2018 IPR037149 Protective antigen, heptamerisation domain superfamily GO:0051260 MC28_1617 378b11e09a83314cb908e8689869c91b 738 Gene3D G3DSA:3.90.182.10 32 154 4.2E-14 T 14-10-2018 MC28_4173 f7d9227de37e5601e63c5cba79c3c6f8 83 SUPERFAMILY SSF116922 3 78 7.32E-27 T 14-10-2018 IPR023162 Apc36109-like domain superfamily MC28_4173 f7d9227de37e5601e63c5cba79c3c6f8 83 ProDom PD062625 YUGE 1 83 3.0E-31 T 14-10-2018 IPR015053 Protein of unknown function DUF1871 MC28_4173 f7d9227de37e5601e63c5cba79c3c6f8 83 Gene3D G3DSA:1.10.340.20 2 83 1.2E-29 T 14-10-2018 IPR023162 Apc36109-like domain superfamily MC28_4173 f7d9227de37e5601e63c5cba79c3c6f8 83 Pfam PF08958 Domain of unknown function (DUF1871) 6 82 3.2E-36 T 14-10-2018 IPR015053 Protein of unknown function DUF1871 MC28_F222 02e83daa8b652de12b3b386c047d7552 617 PIRSF PIRSF018968 1 615 2.1E-54 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_F222 02e83daa8b652de12b3b386c047d7552 617 Pfam PF02687 FtsX-like permease family 84 179 8.4E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_3774 e364f7f336db7c173cde2bbcaa359247 273 Hamap MF_00258 Glutamate racemase [murI]. 10 262 40.919 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_3774 e364f7f336db7c173cde2bbcaa359247 273 SUPERFAMILY SSF53681 11 113 1.01E-36 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_3774 e364f7f336db7c173cde2bbcaa359247 273 Gene3D G3DSA:3.40.50.1860 12 261 7.2E-102 T 14-10-2018 MC28_3774 e364f7f336db7c173cde2bbcaa359247 273 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 76 84 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_3774 e364f7f336db7c173cde2bbcaa359247 273 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 186 196 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_3774 e364f7f336db7c173cde2bbcaa359247 273 Pfam PF01177 Asp/Glu/Hydantoin racemase 12 221 5.9E-44 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_3774 e364f7f336db7c173cde2bbcaa359247 273 Gene3D G3DSA:3.40.50.1860 101 213 7.2E-102 T 14-10-2018 MC28_3774 e364f7f336db7c173cde2bbcaa359247 273 SUPERFAMILY SSF53681 117 270 1.19E-40 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_3774 e364f7f336db7c173cde2bbcaa359247 273 TIGRFAM TIGR00067 glut_race: glutamate racemase 12 260 1.2E-89 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 MC28_2063 92c0cb7ce238bb4495106b8af159aad2 241 SUPERFAMILY SSF55729 76 239 1.35E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2063 92c0cb7ce238bb4495106b8af159aad2 241 Gene3D G3DSA:3.40.630.110 1 100 5.2E-23 T 14-10-2018 MC28_2063 92c0cb7ce238bb4495106b8af159aad2 241 Pfam PF12746 GNAT acetyltransferase 1 236 1.3E-82 T 14-10-2018 IPR027365 GNAT acetyltransferase YdfB-like MC28_2063 92c0cb7ce238bb4495106b8af159aad2 241 Gene3D G3DSA:3.40.630.30 101 227 2.1E-45 T 14-10-2018 MC28_3715 9c75f0e5fa35a23a1a48c07d5bcfd0a6 176 Gene3D G3DSA:3.10.20.420 37 90 1.0E-15 T 14-10-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily MC28_3715 9c75f0e5fa35a23a1a48c07d5bcfd0a6 176 Pfam PF08977 Bypass of Forespore C, N terminal 39 89 4.8E-21 T 14-10-2018 IPR015071 Bypass-of-forespore C, N-terminal MC28_3715 9c75f0e5fa35a23a1a48c07d5bcfd0a6 176 Pfam PF08955 BofC C-terminal domain 91 163 1.3E-24 T 14-10-2018 IPR015050 Bypass of forespore C, C-terminal MC28_3715 9c75f0e5fa35a23a1a48c07d5bcfd0a6 176 Gene3D G3DSA:3.30.70.1740 91 167 5.3E-29 T 14-10-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily MC28_0222 4a46652b631bde4f01e5920b34d98ab0 109 Pfam PF03413 Peptidase propeptide and YPEB domain 42 103 1.5E-5 T 14-10-2018 IPR025711 PepSY domain MC28_0222 4a46652b631bde4f01e5920b34d98ab0 109 Gene3D G3DSA:3.10.450.40 35 109 3.4E-7 T 14-10-2018 MC28_1928 0a212cea7f94d93cf508d86c0f4b4578 328 Pfam PF07859 alpha/beta hydrolase fold 88 295 6.2E-64 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 MC28_1928 0a212cea7f94d93cf508d86c0f4b4578 328 Gene3D G3DSA:3.40.50.1820 10 327 1.1E-89 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1928 0a212cea7f94d93cf508d86c0f4b4578 328 SUPERFAMILY SSF53474 54 316 2.03E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1703 6224c32602f0b8380097ceb00bfaff4e 385 Pfam PF01757 Acyltransferase family 22 363 2.1E-36 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 MC28_G230 a5159135a9604212c26557759cbdf00e 172 Gene3D G3DSA:2.60.40.1240 32 160 7.3E-26 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily MC28_G230 a5159135a9604212c26557759cbdf00e 172 Pfam PF11611 Domain of unknown function (DUF4352) 48 162 9.8E-24 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 Gene3D G3DSA:3.40.50.200 181 498 5.3E-33 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 Pfam PF03272 Putative mucin or carbohydrate-binding module 790 908 5.2E-26 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 Pfam PF03272 Putative mucin or carbohydrate-binding module 656 769 3.7E-28 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 Pfam PF03272 Putative mucin or carbohydrate-binding module 522 635 1.7E-28 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 434 444 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 433 449 9.9E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 212 231 9.9E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 246 259 9.9E-7 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 Pfam PF00082 Subtilase family 212 477 1.7E-15 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 MC28_F086 b299e4fa255e29db0767c4229fdcde20 911 SUPERFAMILY SSF52743 192 473 7.33E-35 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 MC28_2114 c9e4c82c9798b773771fc50c949528b0 415 SUPERFAMILY SSF52440 174 286 8.06E-11 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily MC28_2114 c9e4c82c9798b773771fc50c949528b0 415 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 19 413 7.2E-74 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain MC28_2114 c9e4c82c9798b773771fc50c949528b0 415 Gene3D G3DSA:3.30.1490.330 271 365 2.7E-11 T 14-10-2018 MC28_2114 c9e4c82c9798b773771fc50c949528b0 415 SUPERFAMILY SSF56059 8 411 2.97E-51 T 14-10-2018 MC28_0429 84cd576a7b14eb27108733c693b00d7e 309 Pfam PF00535 Glycosyl transferase family 2 11 117 3.3E-20 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_0429 84cd576a7b14eb27108733c693b00d7e 309 SUPERFAMILY SSF53448 8 239 6.68E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_0429 84cd576a7b14eb27108733c693b00d7e 309 Gene3D G3DSA:3.90.550.10 1 270 3.3E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4993 b6d12b0ed9ffe4f24280b34c47960ab1 133 SUPERFAMILY SSF53335 2 71 2.41E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4993 b6d12b0ed9ffe4f24280b34c47960ab1 133 Gene3D G3DSA:3.40.50.150 1 130 2.8E-14 T 14-10-2018 MC28_4993 b6d12b0ed9ffe4f24280b34c47960ab1 133 Pfam PF08241 Methyltransferase domain 2 42 2.1E-11 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_5160 844b37d082d697d5ec44cbd93ca38001 57 Gene3D G3DSA:1.10.260.40 1 56 2.6E-11 T 14-10-2018 MC28_5160 844b37d082d697d5ec44cbd93ca38001 57 SUPERFAMILY SSF47413 4 55 4.5E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_5160 844b37d082d697d5ec44cbd93ca38001 57 Pfam PF01381 Helix-turn-helix 2 52 1.7E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 Gene3D G3DSA:2.40.50.140 6 147 3.9E-63 T 14-10-2018 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 SUPERFAMILY SSF50249 9 144 1.63E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_4817 5c655420bc400d6073520fc32a4254a6 147 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 8 143 3.1E-68 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 Pfam PF00164 Ribosomal protein S12/S23 39 143 2.2E-38 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 PRINTS PR01034 Ribosomal protein S12 signature 47 62 1.2E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 PRINTS PR01034 Ribosomal protein S12 signature 130 142 1.2E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 PRINTS PR01034 Ribosomal protein S12 signature 114 130 1.2E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 PRINTS PR01034 Ribosomal protein S12 signature 78 97 1.2E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 PRINTS PR01034 Ribosomal protein S12 signature 97 114 1.2E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 PRINTS PR01034 Ribosomal protein S12 signature 62 77 1.2E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 ProSitePatterns PS00055 Ribosomal protein S12 signature. 63 70 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 PIRSF PIRSF002133 8 144 5.4E-49 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4817 5c655420bc400d6073520fc32a4254a6 147 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 8 143 40.775 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3843 4c64282727ee2f4a6927294a841f8804 72 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 4 71 22.058 T 14-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 MC28_3843 4c64282727ee2f4a6927294a841f8804 72 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 7 71 1.8E-36 T 14-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 MC28_3843 4c64282727ee2f4a6927294a841f8804 72 Pfam PF14098 Small, acid-soluble spore protein I 6 70 3.3E-30 T 14-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 MC28_1828 9209ece5add31ea7a891f60c765ccc7f 340 Pfam PF12395 Protein of unknown function 230 335 1.8E-33 T 14-10-2018 IPR022123 Protein of unknown function DUF3658 MC28_1828 9209ece5add31ea7a891f60c765ccc7f 340 Pfam PF08874 Domain of unknown function (DUF1835) 72 193 1.6E-29 T 14-10-2018 IPR014973 Protein of unknown function DUF1835 MC28_0455 ec78cee30411e8c990d31e6fdea9be31 132 SMART SM00635 41 121 5.5E-5 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 MC28_0455 ec78cee30411e8c990d31e6fdea9be31 132 Pfam PF02368 Bacterial Ig-like domain (group 2) 44 115 2.1E-7 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 MC28_0455 ec78cee30411e8c990d31e6fdea9be31 132 Gene3D G3DSA:2.60.40.1080 38 125 1.6E-17 T 14-10-2018 MC28_0455 ec78cee30411e8c990d31e6fdea9be31 132 SUPERFAMILY SSF49373 39 121 5.18E-9 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments MC28_4803 91f7d34536a60db44552e508c7e89612 135 SUPERFAMILY SSF69065 3 126 3.84E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 MC28_4803 91f7d34536a60db44552e508c7e89612 135 SMART SM00535 1 128 0.0026 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 MC28_4803 91f7d34536a60db44552e508c7e89612 135 Pfam PF00636 Ribonuclease III domain 11 108 1.9E-15 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 MC28_4803 91f7d34536a60db44552e508c7e89612 135 Gene3D G3DSA:1.10.1520.10 1 135 1.7E-52 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 MC28_4803 91f7d34536a60db44552e508c7e89612 135 PIRSF PIRSF005520 1 132 5.7E-54 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family MC28_4803 91f7d34536a60db44552e508c7e89612 135 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 1 127 30.415 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family MC28_3482 d280036aee8cbab3f3367b3c6a930da7 390 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 2 383 1.6E-161 T 14-10-2018 IPR014194 Sporulation stage III, protein AE MC28_3482 d280036aee8cbab3f3367b3c6a930da7 390 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 68 383 1.6E-109 T 14-10-2018 IPR014194 Sporulation stage III, protein AE MC28_5108 6b132943f54a32b6187500ac25687ff9 249 Gene3D G3DSA:3.40.50.300 1 221 1.9E-55 T 14-10-2018 MC28_5108 6b132943f54a32b6187500ac25687ff9 249 SMART SM00382 28 207 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_5108 6b132943f54a32b6187500ac25687ff9 249 Pfam PF00005 ABC transporter 19 157 5.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5108 6b132943f54a32b6187500ac25687ff9 249 SUPERFAMILY SSF52540 4 227 2.73E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5108 6b132943f54a32b6187500ac25687ff9 249 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2182 c61cab792ed7ff34c6f8a3c9e2ca8904 546 Gene3D G3DSA:3.40.630.10 4 230 1.5E-39 T 14-10-2018 MC28_2182 c61cab792ed7ff34c6f8a3c9e2ca8904 546 PIRSF PIRSF010386 1 545 1.5E-237 T 14-10-2018 IPR012166 Uncharacterised protein family RocB MC28_2182 c61cab792ed7ff34c6f8a3c9e2ca8904 546 SUPERFAMILY SSF53187 6 523 6.29E-33 T 14-10-2018 MC28_2182 c61cab792ed7ff34c6f8a3c9e2ca8904 546 Pfam PF01546 Peptidase family M20/M25/M40 109 377 1.3E-11 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_5123 f09416bdf6972af153f35954c48557dd 306 Gene3D G3DSA:3.30.420.40 122 305 4.9E-50 T 14-10-2018 MC28_5123 f09416bdf6972af153f35954c48557dd 306 Gene3D G3DSA:3.30.420.40 13 121 6.4E-22 T 14-10-2018 MC28_5123 f09416bdf6972af153f35954c48557dd 306 Pfam PF00480 ROK family 18 299 2.4E-44 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 MC28_5123 f09416bdf6972af153f35954c48557dd 306 SUPERFAMILY SSF53067 17 305 2.28E-57 T 14-10-2018 MC28_4895 4d04987b6a5ae11ed0391fe479bcb27d 546 Gene3D G3DSA:3.10.105.10 295 517 9.8E-173 T 14-10-2018 MC28_4895 4d04987b6a5ae11ed0391fe479bcb27d 546 PIRSF PIRSF002741 2 546 6.4E-104 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_4895 4d04987b6a5ae11ed0391fe479bcb27d 546 Gene3D G3DSA:3.90.76.10 74 195 9.8E-173 T 14-10-2018 MC28_4895 4d04987b6a5ae11ed0391fe479bcb27d 546 Gene3D G3DSA:3.40.190.10 55 530 9.8E-173 T 14-10-2018 MC28_4895 4d04987b6a5ae11ed0391fe479bcb27d 546 SUPERFAMILY SSF53850 36 531 2.35E-120 T 14-10-2018 MC28_4895 4d04987b6a5ae11ed0391fe479bcb27d 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 463 6.9E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_4872 a77db961299ec967367bf2ca709303db 652 Gene3D G3DSA:3.40.50.1820 389 645 1.2E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4872 a77db961299ec967367bf2ca709303db 652 Pfam PF00326 Prolyl oligopeptidase family 444 641 4.6E-42 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 MC28_4872 a77db961299ec967367bf2ca709303db 652 Pfam PF07676 WD40-like Beta Propeller Repeat 66 96 0.16 T 14-10-2018 IPR011659 WD40-like Beta Propeller MC28_4872 a77db961299ec967367bf2ca709303db 652 SUPERFAMILY SSF82171 19 354 3.92E-33 T 14-10-2018 MC28_4872 a77db961299ec967367bf2ca709303db 652 SUPERFAMILY SSF53474 385 640 1.43E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4872 a77db961299ec967367bf2ca709303db 652 Gene3D G3DSA:2.120.10.30 168 388 2.0E-11 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like MC28_4872 a77db961299ec967367bf2ca709303db 652 Gene3D G3DSA:2.120.10.30 8 159 2.6E-16 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like MC28_3460 218dfa751b5341e48639b93dac83faab 242 SUPERFAMILY SSF51695 1 237 1.67E-73 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_3460 218dfa751b5341e48639b93dac83faab 242 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 233 2.8E-42 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 MC28_3460 218dfa751b5341e48639b93dac83faab 242 Gene3D G3DSA:3.20.20.190 1 239 3.2E-82 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_3597 2cb75b55be262d152c1c37292913cf01 399 PIRSF PIRSF029895 1 398 1.8E-172 T 14-10-2018 IPR010690 Putative stage IV sporulation YqfD MC28_3597 2cb75b55be262d152c1c37292913cf01 399 Pfam PF06898 Putative stage IV sporulation protein YqfD 9 385 9.0E-122 T 14-10-2018 IPR010690 Putative stage IV sporulation YqfD MC28_3597 2cb75b55be262d152c1c37292913cf01 399 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 5 387 4.2E-149 T 14-10-2018 IPR010690 Putative stage IV sporulation YqfD MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 Gene3D G3DSA:3.40.250.10 380 478 4.2E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 Gene3D G3DSA:3.60.15.10 3 271 3.9E-77 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 Pfam PF00753 Metallo-beta-lactamase superfamily 18 198 2.7E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 Pfam PF00581 Rhodanese-like domain 383 471 3.2E-14 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 Pfam PF00581 Rhodanese-like domain 281 343 5.2E-5 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 SUPERFAMILY SSF52821 244 359 7.46E-11 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 SMART SM00849 17 204 9.6E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 Gene3D G3DSA:3.40.250.10 273 372 2.4E-15 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 SMART SM00450 380 475 1.1E-24 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 SUPERFAMILY SSF52821 379 478 9.17E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_G053 bb83cc8d165066fd7dbe375133ca0db5 478 SUPERFAMILY SSF56281 10 267 6.72E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_F126 932dacab0a8dec0e3128797a08e1aa8d 144 SUPERFAMILY SSF55811 10 127 2.44E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_F126 932dacab0a8dec0e3128797a08e1aa8d 144 Pfam PF00293 NUDIX domain 11 122 2.4E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_F126 932dacab0a8dec0e3128797a08e1aa8d 144 Gene3D G3DSA:3.90.79.10 1 142 3.8E-21 T 14-10-2018 MC28_1634 6100051055709d09719a9e5348b89a8f 49 Pfam PF09388 Spo0E like sporulation regulatory protein 6 46 1.5E-12 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 MC28_1634 6100051055709d09719a9e5348b89a8f 49 SUPERFAMILY SSF140500 1 48 9.42E-14 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_1634 6100051055709d09719a9e5348b89a8f 49 Gene3D G3DSA:1.20.58.990 1 49 3.4E-18 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_3262 a1a826a08741bcaaaa1f8849db5130ef 48 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 22 45 2.4E-13 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_3262 a1a826a08741bcaaaa1f8849db5130ef 48 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 26 47 2.3E-12 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_3317 7d5434a857de51a2ca76b99a54129c7c 205 Gene3D G3DSA:3.40.390.10 16 197 1.6E-5 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 MC28_2406 c3f5b824087257872454faac8bf11fc1 156 Gene3D G3DSA:3.40.1580.10 3 156 3.2E-18 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily MC28_2406 c3f5b824087257872454faac8bf11fc1 156 SUPERFAMILY SSF160631 6 155 3.66E-18 T 14-10-2018 MC28_2406 c3f5b824087257872454faac8bf11fc1 156 SMART SM00860 12 154 6.2E-4 T 14-10-2018 IPR018958 Knr4/Smi1-like domain MC28_2406 c3f5b824087257872454faac8bf11fc1 156 Pfam PF14568 SMI1-KNR4 cell-wall 18 152 8.5E-20 T 14-10-2018 MC28_1507 4ce28011de0cf15b812f56ebc440129d 47 Pfam PF17356 Phage-like element PBSX protein XtrA 7 47 6.6E-21 T 14-10-2018 IPR035530 Phage-like element PBSX protein XtrA MC28_3135 c55195d07a0a767fc1ee69c67fcfd0b6 324 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3135 c55195d07a0a767fc1ee69c67fcfd0b6 324 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 48 59 4.3E-5 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3135 c55195d07a0a767fc1ee69c67fcfd0b6 324 Pfam PF00953 Glycosyl transferase family 4 83 248 9.9E-38 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 MC28_3135 c55195d07a0a767fc1ee69c67fcfd0b6 324 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 320 1.9E-120 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3135 c55195d07a0a767fc1ee69c67fcfd0b6 324 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 322 24.248 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_2826 f6127c134eb5dff8ed2e5b9227b2ba02 146 Gene3D G3DSA:3.30.310.250 1 145 4.5E-40 T 14-10-2018 IPR038449 SirA superfamily MC28_2826 f6127c134eb5dff8ed2e5b9227b2ba02 146 Pfam PF10747 Sporulation inhibitor of replication protein SirA 2 140 8.8E-41 T 14-10-2018 IPR019683 Sporulation inhibitor of replication protein SirA MC28_5371 562871fa2cd503e6c908af4ed73c1336 475 Gene3D G3DSA:1.20.1740.10 7 473 8.1E-70 T 14-10-2018 MC28_5371 562871fa2cd503e6c908af4ed73c1336 475 PIRSF PIRSF006060 1 474 1.6E-84 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5371 562871fa2cd503e6c908af4ed73c1336 475 ProSitePatterns PS00218 Amino acid permeases signature. 42 73 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 MC28_5371 562871fa2cd503e6c908af4ed73c1336 475 Pfam PF00324 Amino acid permease 17 461 5.9E-123 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_3398 98c95cb021bb3e779d4bda145c799cd9 150 Gene3D G3DSA:3.40.630.30 20 150 3.7E-21 T 14-10-2018 MC28_3398 98c95cb021bb3e779d4bda145c799cd9 150 Pfam PF00583 Acetyltransferase (GNAT) family 20 108 4.9E-11 T 14-10-2018 IPR000182 GNAT domain MC28_3398 98c95cb021bb3e779d4bda145c799cd9 150 SUPERFAMILY SSF55729 28 116 3.14E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_G191 150abe40ad5e68cdbb16653dfada3457 302 SUPERFAMILY SSF53822 3 296 3.77E-41 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_G191 150abe40ad5e68cdbb16653dfada3457 302 Gene3D G3DSA:3.40.50.2300 116 232 4.7E-39 T 14-10-2018 MC28_G191 150abe40ad5e68cdbb16653dfada3457 302 Gene3D G3DSA:3.40.50.2300 6 115 4.7E-39 T 14-10-2018 MC28_G191 150abe40ad5e68cdbb16653dfada3457 302 Pfam PF13458 Periplasmic binding protein 4 164 3.0E-17 T 14-10-2018 IPR028081 Leucine-binding protein domain MC28_D065 733172762a3b695030f9ce18681a862b 250 Pfam PF02517 CAAX protease self-immunity 131 235 2.3E-11 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_4037 2785ad56afb8fc8b1ae975e1e6711b4f 313 Gene3D G3DSA:1.10.3720.10 83 257 2.9E-6 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4037 2785ad56afb8fc8b1ae975e1e6711b4f 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 250 6.4E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_4037 2785ad56afb8fc8b1ae975e1e6711b4f 313 SUPERFAMILY SSF161098 86 248 2.35E-10 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4967 d7988a7055e5794db7ffa2cb285ed822 417 Gene3D G3DSA:1.10.150.130 75 190 6.3E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_4967 d7988a7055e5794db7ffa2cb285ed822 417 Gene3D G3DSA:1.10.443.10 191 391 4.9E-39 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_4967 d7988a7055e5794db7ffa2cb285ed822 417 Pfam PF13102 Phage integrase SAM-like domain 98 179 1.4E-6 T 14-10-2018 IPR025269 Phage integrase SAM-like domain MC28_4967 d7988a7055e5794db7ffa2cb285ed822 417 Pfam PF00589 Phage integrase family 217 377 1.5E-21 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_4967 d7988a7055e5794db7ffa2cb285ed822 417 SUPERFAMILY SSF56349 80 378 4.71E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_2084 5c457d0ca92d7ee9a62bd45dd3f0338c 400 SUPERFAMILY SSF103473 3 392 4.19E-47 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2084 5c457d0ca92d7ee9a62bd45dd3f0338c 400 Gene3D G3DSA:1.20.1250.20 2 386 5.0E-38 T 14-10-2018 MC28_2084 5c457d0ca92d7ee9a62bd45dd3f0338c 400 Pfam PF07690 Major Facilitator Superfamily 11 344 3.6E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2987 b2f0c6fe562d190961849f8fecab7819 485 TIGRFAM TIGR01633 phi3626_gp14_N: putative phage tail component, N-terminal domain 4 126 7.3E-32 T 14-10-2018 IPR006520 Streptococcus phage 7201, Orf34, N-terminal MC28_2987 b2f0c6fe562d190961849f8fecab7819 485 Gene3D G3DSA:2.40.30.200 3 128 4.9E-20 T 14-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily MC28_2987 b2f0c6fe562d190961849f8fecab7819 485 Gene3D G3DSA:2.60.120.860 392 472 1.3E-5 T 14-10-2018 MC28_2987 b2f0c6fe562d190961849f8fecab7819 485 Pfam PF05709 Phage tail protein 17 485 2.8E-65 T 14-10-2018 IPR008841 Siphovirus-type tail component MC28_0072 ba5eab7799975088e27973faf57b2e25 434 Gene3D G3DSA:2.30.30.40 108 167 2.0E-14 T 14-10-2018 MC28_0072 ba5eab7799975088e27973faf57b2e25 434 Pfam PF08239 Bacterial SH3 domain 116 166 4.0E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0072 ba5eab7799975088e27973faf57b2e25 434 Pfam PF08239 Bacterial SH3 domain 56 105 1.4E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0072 ba5eab7799975088e27973faf57b2e25 434 Pfam PF06725 3D domain 375 434 1.9E-19 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 MC28_0072 ba5eab7799975088e27973faf57b2e25 434 SUPERFAMILY SSF50685 372 414 4.53E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_0072 ba5eab7799975088e27973faf57b2e25 434 SMART SM00287 47 104 3.8E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0072 ba5eab7799975088e27973faf57b2e25 434 SMART SM00287 107 170 4.2E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_0072 ba5eab7799975088e27973faf57b2e25 434 Gene3D G3DSA:2.30.30.40 43 107 5.3E-18 T 14-10-2018 MC28_1979 57397ab6c75f8a1801eb09d93556b80d 231 SUPERFAMILY SSF88659 104 169 1.87E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_1979 57397ab6c75f8a1801eb09d93556b80d 231 SUPERFAMILY SSF88946 26 95 6.28E-9 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_1979 57397ab6c75f8a1801eb09d93556b80d 231 Gene3D G3DSA:1.10.1740.10 17 91 9.1E-8 T 14-10-2018 MC28_1979 57397ab6c75f8a1801eb09d93556b80d 231 Gene3D G3DSA:1.10.10.10 107 169 1.0E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1979 57397ab6c75f8a1801eb09d93556b80d 231 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 164 3.9E-15 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_1979 57397ab6c75f8a1801eb09d93556b80d 231 Pfam PF04542 Sigma-70 region 2 28 87 4.1E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_1979 57397ab6c75f8a1801eb09d93556b80d 231 Pfam PF08281 Sigma-70, region 4 112 163 6.0E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_0517 e131bfc5b097fe28bb5891b168bdc106 266 Gene3D G3DSA:1.10.3720.10 1 255 3.8E-57 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0517 e131bfc5b097fe28bb5891b168bdc106 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 249 6.4E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0517 e131bfc5b097fe28bb5891b168bdc106 266 SUPERFAMILY SSF161098 4 253 1.44E-61 T 14-10-2018 IPR035906 MetI-like superfamily MC28_C073 2e847455b665c64589b5df2929eaca05 477 SUPERFAMILY SSF53098 8 474 3.49E-83 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_C073 2e847455b665c64589b5df2929eaca05 477 Pfam PF01609 Transposase DDE domain 119 385 6.0E-63 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 Gene3D G3DSA:2.40.30.170 340 420 9.6E-9 T 14-10-2018 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 Gene3D G3DSA:1.10.287.470 218 302 9.6E-9 T 14-10-2018 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 SUPERFAMILY SSF111369 64 151 3.92E-5 T 14-10-2018 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 Gene3D G3DSA:2.40.50.100 303 339 9.6E-9 T 14-10-2018 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 Gene3D G3DSA:2.40.50.100 64 97 1.1E-8 T 14-10-2018 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 Pfam PF13533 Biotin-lipoyl like 63 106 6.1E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 407 422 9.3E-11 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 9.3E-11 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 336 9.3E-11 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 Gene3D G3DSA:1.10.287.470 98 173 1.1E-8 T 14-10-2018 MC28_C084 845f4d9d1c41e9cde4b12e5566c08aa8 437 Pfam PF13437 HlyD family secretion protein 302 404 1.2E-10 T 14-10-2018 MC28_2103 185f44916c91fd39c0305abba2947808 273 Pfam PF14279 HNH endonuclease 4 53 2.4E-13 T 14-10-2018 IPR029471 HNH endonuclease 5 MC28_0292 340a48fdcc0fb2c7d9db7f234cae1396 161 SUPERFAMILY SSF48498 67 157 4.89E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_0292 340a48fdcc0fb2c7d9db7f234cae1396 161 Pfam PF00440 Bacterial regulatory proteins, tetR family 4 37 3.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0292 340a48fdcc0fb2c7d9db7f234cae1396 161 Gene3D G3DSA:1.10.357.10 1 161 4.0E-45 T 14-10-2018 MC28_0292 340a48fdcc0fb2c7d9db7f234cae1396 161 SUPERFAMILY SSF46689 4 55 7.7E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_4013 61505555195a975c2f320d643fade1ae 364 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 10 360 4.6E-49 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_4013 61505555195a975c2f320d643fade1ae 364 Pfam PF03845 Spore germination protein 9 326 5.3E-104 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_0039 286d1f57dc7d481e719e8f089c3a3795 360 Gene3D G3DSA:3.30.300.210 210 359 9.2E-14 T 14-10-2018 IPR038501 Spore germination GerAC superfamily MC28_0039 286d1f57dc7d481e719e8f089c3a3795 360 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 359 2.6E-87 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_0039 286d1f57dc7d481e719e8f089c3a3795 360 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 194 357 1.0E-26 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_3968 b7c301f2a5c10d667c2f985a2e840832 372 SUPERFAMILY SSF54675 18 128 6.08E-22 T 14-10-2018 MC28_3968 b7c301f2a5c10d667c2f985a2e840832 372 Gene3D G3DSA:3.90.1170.20 12 118 1.5E-16 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 MC28_3968 b7c301f2a5c10d667c2f985a2e840832 372 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 47 118 7.1E-8 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 MC28_3968 b7c301f2a5c10d667c2f985a2e840832 372 SUPERFAMILY SSF51690 128 355 7.95E-48 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 MC28_3968 b7c301f2a5c10d667c2f985a2e840832 372 PIRSF PIRSF000484 15 364 1.4E-65 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 MC28_3968 b7c301f2a5c10d667c2f985a2e840832 372 Gene3D G3DSA:3.20.20.70 120 333 1.3E-64 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_F196 7f84e7bd84cce139adc0c875fc070313 194 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 179 1.0E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_F196 7f84e7bd84cce139adc0c875fc070313 194 Gene3D G3DSA:3.40.50.1240 4 189 8.7E-27 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_F196 7f84e7bd84cce139adc0c875fc070313 194 SUPERFAMILY SSF53254 7 184 3.85E-27 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_4914 2c11b3ad69f705ff941531b2487a6d6d 264 Pfam PF16285 Domain of unknown function (DUF4931) 8 251 4.7E-126 T 14-10-2018 MC28_4914 2c11b3ad69f705ff941531b2487a6d6d 264 Gene3D G3DSA:3.30.428.10 57 131 2.4E-11 T 14-10-2018 IPR036265 HIT-like superfamily MC28_4914 2c11b3ad69f705ff941531b2487a6d6d 264 SUPERFAMILY SSF54197 13 129 4.64E-23 T 14-10-2018 IPR036265 HIT-like superfamily MC28_4914 2c11b3ad69f705ff941531b2487a6d6d 264 PIRSF PIRSF031505 1 254 5.6E-128 T 14-10-2018 IPR012361 Galactose-1-phosphate uridylyltransferase, short form, putative MC28_G188 dc30b50d5d9e3d0153a564ef83159b88 97 Pfam PF01037 Lrp/AsnC ligand binding domain 21 75 4.8E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MC28_G188 dc30b50d5d9e3d0153a564ef83159b88 97 Gene3D G3DSA:3.30.70.920 6 97 5.8E-16 T 14-10-2018 MC28_G188 dc30b50d5d9e3d0153a564ef83159b88 97 SUPERFAMILY SSF54909 16 84 2.28E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_5200 ca4c27a5714a107fcd3c3204bf3f0c14 190 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 5 187 8.3E-34 T 14-10-2018 IPR006490 Phage major tail protein, phi13 family MC28_1107 c32a357b86367b5073a1d4480ca2a2ef 510 Gene3D G3DSA:3.40.50.1820 220 484 4.5E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1107 c32a357b86367b5073a1d4480ca2a2ef 510 Gene3D G3DSA:3.10.450.590 77 189 2.9E-5 T 14-10-2018 MC28_1107 c32a357b86367b5073a1d4480ca2a2ef 510 SUPERFAMILY SSF53474 170 479 8.7E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1107 c32a357b86367b5073a1d4480ca2a2ef 510 Pfam PF13026 Protein of unknown function (DUF3887) 98 188 6.7E-8 T 14-10-2018 IPR024981 Domain of unknown function DUF3887 KEGG: 00983+3.1.1.1|MetaCyc: PWY-6303|MetaCyc: PWY-6857 MC28_1107 c32a357b86367b5073a1d4480ca2a2ef 510 Pfam PF12146 Serine aminopeptidase, S33 260 472 6.1E-7 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 MC28_2877 89f5f6fedf0685fcfef036e0e4adf390 317 SUPERFAMILY SSF52540 11 232 5.44E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2877 89f5f6fedf0685fcfef036e0e4adf390 317 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 303 30.932 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 MC28_2877 89f5f6fedf0685fcfef036e0e4adf390 317 Gene3D G3DSA:3.40.50.300 13 291 7.3E-108 T 14-10-2018 MC28_2877 89f5f6fedf0685fcfef036e0e4adf390 317 SUPERFAMILY SSF52540 10 163 5.07E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2877 89f5f6fedf0685fcfef036e0e4adf390 317 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 294 2.7E-116 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 MC28_2877 89f5f6fedf0685fcfef036e0e4adf390 317 Pfam PF01715 IPP transferase 42 286 2.6E-85 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 MC28_2877 89f5f6fedf0685fcfef036e0e4adf390 317 Gene3D G3DSA:1.10.20.140 116 188 7.3E-108 T 14-10-2018 MC28_3132 d3f6db8c3ac80cfa6aa20793c10e430b 369 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 6 360 4.2E-101 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3132 d3f6db8c3ac80cfa6aa20793c10e430b 369 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 147 1.9E-47 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3132 d3f6db8c3ac80cfa6aa20793c10e430b 369 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 367 34.717 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3132 d3f6db8c3ac80cfa6aa20793c10e430b 369 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 194 358 9.1E-43 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 MC28_3132 d3f6db8c3ac80cfa6aa20793c10e430b 369 Gene3D G3DSA:3.40.50.2000 5 181 8.3E-62 T 14-10-2018 MC28_3132 d3f6db8c3ac80cfa6aa20793c10e430b 369 SUPERFAMILY SSF53756 7 367 8.98E-110 T 14-10-2018 MC28_3132 d3f6db8c3ac80cfa6aa20793c10e430b 369 Gene3D G3DSA:3.40.50.2000 182 351 4.3E-49 T 14-10-2018 MC28_1187 9c689302eadad088306de1430b592076 91 Gene3D G3DSA:1.10.1200.10 5 86 4.9E-13 T 14-10-2018 IPR036736 ACP-like superfamily MC28_1187 9c689302eadad088306de1430b592076 91 SUPERFAMILY SSF47336 1 82 1.3E-11 T 14-10-2018 IPR036736 ACP-like superfamily MC28_2194 3059bbe56589ab50d0bc4e56943a61eb 192 Gene3D G3DSA:1.10.150.240 13 73 9.4E-31 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_2194 3059bbe56589ab50d0bc4e56943a61eb 192 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 3 158 1.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_2194 3059bbe56589ab50d0bc4e56943a61eb 192 SUPERFAMILY SSF56784 3 165 7.03E-28 T 14-10-2018 IPR036412 HAD-like superfamily MC28_2194 3059bbe56589ab50d0bc4e56943a61eb 192 Gene3D G3DSA:3.40.50.1000 3 159 9.4E-31 T 14-10-2018 IPR023214 HAD superfamily MC28_2194 3059bbe56589ab50d0bc4e56943a61eb 192 Pfam PF13419 Haloacid dehalogenase-like hydrolase 3 163 1.8E-18 T 14-10-2018 MC28_3336 2ef49551ae383adf11e069ff2770eb83 386 Gene3D G3DSA:3.30.70.270 210 383 3.5E-51 T 14-10-2018 MC28_3336 2ef49551ae383adf11e069ff2770eb83 386 Pfam PF13188 PAS domain 100 143 8.5E-5 T 14-10-2018 IPR000014 PAS domain MC28_3336 2ef49551ae383adf11e069ff2770eb83 386 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 379 2.7E-46 T 14-10-2018 IPR000160 GGDEF domain MC28_3336 2ef49551ae383adf11e069ff2770eb83 386 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 377 1.2E-44 T 14-10-2018 IPR000160 GGDEF domain MC28_3336 2ef49551ae383adf11e069ff2770eb83 386 SUPERFAMILY SSF55073 229 383 1.41E-45 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_3336 2ef49551ae383adf11e069ff2770eb83 386 SMART SM00267 213 381 5.5E-57 T 14-10-2018 IPR000160 GGDEF domain MC28_G343 103ad5d1167ddd07393944d153bc731e 396 Pfam PF14550 Putative phage serine protease XkdF 44 158 3.1E-42 T 14-10-2018 IPR027924 Phage-like element PBSX protein, XkdF MC28_1063 e6b20b336dcec2bf8525ee7f8690a605 208 Pfam PF01810 LysE type translocator 14 206 9.5E-38 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 MC28_1063 e6b20b336dcec2bf8525ee7f8690a605 208 PIRSF PIRSF006324 1 208 3.0E-59 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 MC28_0172 23a0415b4fd52faeed873ec666cb2a26 127 Gene3D G3DSA:3.10.450.130 33 125 4.2E-34 T 14-10-2018 MC28_0172 23a0415b4fd52faeed873ec666cb2a26 127 Pfam PF07252 Protein of unknown function (DUF1433) 34 119 1.9E-35 T 14-10-2018 IPR009881 Protein of unknown function DUF1433 MC28_4288 5dbed14b914d4b5c70dd7ec94fcb80a0 305 PIRSF PIRSF006483 21 305 6.5E-98 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_4288 5dbed14b914d4b5c70dd7ec94fcb80a0 305 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 246 300 8.7E-22 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_4288 5dbed14b914d4b5c70dd7ec94fcb80a0 305 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 40 240 9.1E-59 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_4288 5dbed14b914d4b5c70dd7ec94fcb80a0 305 Gene3D G3DSA:3.30.70.120 215 293 2.6E-19 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_0074 55a5cb7b8c008ac9357ed68a4b61df49 224 SMART SM00382 30 217 3.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0074 55a5cb7b8c008ac9357ed68a4b61df49 224 SUPERFAMILY SSF52540 1 221 5.75E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0074 55a5cb7b8c008ac9357ed68a4b61df49 224 Pfam PF00005 ABC transporter 21 169 1.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0074 55a5cb7b8c008ac9357ed68a4b61df49 224 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0074 55a5cb7b8c008ac9357ed68a4b61df49 224 Gene3D G3DSA:3.40.50.300 1 223 5.5E-68 T 14-10-2018 MC28_B67 288e678999b8f86a61ef19be85c02d24 180 SUPERFAMILY SSF56349 11 177 4.41E-33 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_B67 288e678999b8f86a61ef19be85c02d24 180 Gene3D G3DSA:1.10.443.10 6 179 1.8E-30 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_B67 288e678999b8f86a61ef19be85c02d24 180 Pfam PF00589 Phage integrase family 10 164 4.7E-26 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_5127 faaae86db92de8ed0cf560dc2ea186ad 263 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 32 245 3.8E-80 T 14-10-2018 IPR022493 Integral membrane YkoY MC28_5127 faaae86db92de8ed0cf560dc2ea186ad 263 Pfam PF03741 Integral membrane protein TerC family 35 216 4.9E-54 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 MC28_5127 faaae86db92de8ed0cf560dc2ea186ad 263 SUPERFAMILY SSF103473 30 243 3.79E-6 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1389 3e8300fddc4a4ce67063e36ac645dd0b 344 Pfam PF04235 Protein of unknown function (DUF418) 188 342 2.1E-14 T 14-10-2018 IPR007349 Domain of unknown function DUF418 MC28_4517 8dbe7cdfb8393673faf3361f695b9976 74 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 1 65 1.3E-36 T 14-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID MC28_4517 8dbe7cdfb8393673faf3361f695b9976 74 Gene3D G3DSA:1.10.10.60 1 74 4.1E-35 T 14-10-2018 MC28_4517 8dbe7cdfb8393673faf3361f695b9976 74 Pfam PF12116 Stage III sporulation protein D 1 66 1.7E-33 T 14-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID MC28_5046 a4edc9417dc01d09a08c53a9a241c347 369 Gene3D G3DSA:2.60.40.3760 52 148 1.7E-37 T 14-10-2018 MC28_5046 a4edc9417dc01d09a08c53a9a241c347 369 Pfam PF01522 Polysaccharide deacetylase 205 326 6.4E-14 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_5046 a4edc9417dc01d09a08c53a9a241c347 369 SUPERFAMILY SSF88713 171 341 3.61E-26 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_5046 a4edc9417dc01d09a08c53a9a241c347 369 Gene3D G3DSA:3.20.20.370 149 369 7.4E-57 T 14-10-2018 MC28_1738 1f4633996978ff570d9a33873f27f31f 202 SUPERFAMILY SSF49373 102 195 8.24E-7 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments MC28_1738 1f4633996978ff570d9a33873f27f31f 202 Pfam PF01391 Collagen triple helix repeat (20 copies) 30 75 1.7E-7 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_1738 1f4633996978ff570d9a33873f27f31f 202 Pfam PF01391 Collagen triple helix repeat (20 copies) 45 95 1.2E-7 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_1738 1f4633996978ff570d9a33873f27f31f 202 Gene3D G3DSA:1.20.5.320 66 123 4.5E-5 T 14-10-2018 MC28_1738 1f4633996978ff570d9a33873f27f31f 202 Gene3D G3DSA:2.60.40.10 130 200 2.7E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_0717 922a921c0ab99fa50c504c5d19b060f7 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 3.8E-21 T 14-10-2018 MC28_0717 922a921c0ab99fa50c504c5d19b060f7 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 2.9E-8 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 MC28_0717 922a921c0ab99fa50c504c5d19b060f7 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 2.9E-8 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 MC28_0717 922a921c0ab99fa50c504c5d19b060f7 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 2.9E-8 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 MC28_0717 922a921c0ab99fa50c504c5d19b060f7 82 Gene3D G3DSA:3.30.70.20 2 82 2.3E-34 T 14-10-2018 MC28_0717 922a921c0ab99fa50c504c5d19b060f7 82 SUPERFAMILY SSF54862 4 72 1.82E-13 T 14-10-2018 MC28_3557 57c543fc805780a1f97a478c2999e418 66 SUPERFAMILY SSF158379 1 61 1.7E-22 T 14-10-2018 IPR023164 YqgQ-like superfamily MC28_3557 57c543fc805780a1f97a478c2999e418 66 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 60 4.0E-27 T 14-10-2018 IPR009256 Protein of unknown function DUF910 MC28_3557 57c543fc805780a1f97a478c2999e418 66 Gene3D G3DSA:1.10.287.760 1 66 2.6E-26 T 14-10-2018 IPR023164 YqgQ-like superfamily MC28_5100 f8c8a81aaf7698daad085f2f88ebad0a 211 Pfam PF02581 Thiamine monophosphate synthase 7 190 5.8E-64 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5100 f8c8a81aaf7698daad085f2f88ebad0a 211 Gene3D G3DSA:3.20.20.70 1 210 7.6E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_5100 f8c8a81aaf7698daad085f2f88ebad0a 211 SUPERFAMILY SSF51391 4 205 1.57E-68 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5100 f8c8a81aaf7698daad085f2f88ebad0a 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 203 9.5E-68 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5100 f8c8a81aaf7698daad085f2f88ebad0a 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 208 28.621 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_4417 c5bdaa53e8c30ab91ec5b33cbc64679f 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 4.3E-87 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 MC28_4417 c5bdaa53e8c30ab91ec5b33cbc64679f 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4417 c5bdaa53e8c30ab91ec5b33cbc64679f 228 SUPERFAMILY SSF52540 1 218 2.85E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4417 c5bdaa53e8c30ab91ec5b33cbc64679f 228 SMART SM00382 27 221 1.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4417 c5bdaa53e8c30ab91ec5b33cbc64679f 228 Pfam PF00005 ABC transporter 20 165 3.9E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4417 c5bdaa53e8c30ab91ec5b33cbc64679f 228 Gene3D G3DSA:3.40.50.300 1 221 2.4E-66 T 14-10-2018 MC28_1839 3b85dab1a9d08682d1f03be717be8562 708 SUPERFAMILY SSF56519 56 320 8.89E-36 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 MC28_1839 3b85dab1a9d08682d1f03be717be8562 708 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 303 7.5E-35 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MC28_1839 3b85dab1a9d08682d1f03be717be8562 708 SUPERFAMILY SSF56601 321 692 1.69E-70 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1839 3b85dab1a9d08682d1f03be717be8562 708 Gene3D G3DSA:3.90.1310.30 62 573 1.2E-218 T 14-10-2018 MC28_1839 3b85dab1a9d08682d1f03be717be8562 708 Gene3D G3DSA:1.10.10.1230 87 196 1.2E-218 T 14-10-2018 MC28_1839 3b85dab1a9d08682d1f03be717be8562 708 Gene3D G3DSA:3.40.710.10 320 679 1.2E-218 T 14-10-2018 MC28_1839 3b85dab1a9d08682d1f03be717be8562 708 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 685 6.4E-69 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MC28_C077 3548e82fbb4d830cbaccbf7f36c67713 67 SUPERFAMILY SSF51182 1 59 5.34E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_C077 3548e82fbb4d830cbaccbf7f36c67713 67 Gene3D G3DSA:2.60.120.10 1 65 1.6E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_E005 dc94746877367acfa825c7a081c2ab42 171 SUPERFAMILY SSF52540 15 150 8.15E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_E005 dc94746877367acfa825c7a081c2ab42 171 Gene3D G3DSA:3.40.50.300 15 148 1.1E-6 T 14-10-2018 MC28_4520 0f12d14ca9e53d25cf59c713a7e4d07d 235 Pfam PF12698 ABC-2 family transporter protein 39 227 1.1E-16 T 14-10-2018 MC28_4163 a38b8193f85e7f9a7bcbd6d33689bc0c 226 PRINTS PR01837 MgtC/SapB protein signature 66 88 3.0E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_4163 a38b8193f85e7f9a7bcbd6d33689bc0c 226 PRINTS PR01837 MgtC/SapB protein signature 13 32 3.0E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_4163 a38b8193f85e7f9a7bcbd6d33689bc0c 226 PRINTS PR01837 MgtC/SapB protein signature 94 118 3.0E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_4163 a38b8193f85e7f9a7bcbd6d33689bc0c 226 PRINTS PR01837 MgtC/SapB protein signature 32 50 3.0E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_4163 a38b8193f85e7f9a7bcbd6d33689bc0c 226 Pfam PF02308 MgtC family 10 134 5.6E-33 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_E098 f18b5ffbc62dc9be0cd84f505aee133f 381 Pfam PF13700 Domain of unknown function (DUF4158) 7 172 1.5E-49 T 14-10-2018 IPR025296 Domain of unknown function DUF4158 MC28_0462 7b04c5c6f80a9e9d9f08015e0f4191b1 204 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 202 39.087 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 MC28_0462 7b04c5c6f80a9e9d9f08015e0f4191b1 204 SUPERFAMILY SSF51366 1 200 9.89E-57 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 MC28_0462 7b04c5c6f80a9e9d9f08015e0f4191b1 204 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 197 8.2E-53 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 MC28_0462 7b04c5c6f80a9e9d9f08015e0f4191b1 204 Gene3D G3DSA:3.20.20.70 1 202 3.5E-71 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2462 a471e1a4333344edce9eb6cfcf606f96 94 Pfam PF06949 Protein of unknown function (DUF1292) 17 88 2.2E-11 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 MC28_1721 b6241a4f56460c16d7806b11c4b82bc4 471 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 69 204 1.6E-9 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_1721 b6241a4f56460c16d7806b11c4b82bc4 471 SUPERFAMILY SSF51695 46 358 9.42E-54 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_1721 b6241a4f56460c16d7806b11c4b82bc4 471 SMART SM00148 55 206 2.7E-9 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_3624 5847db1269d66c12bc5396c2387ca51a 189 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 65 7.7E-12 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MC28_3624 5847db1269d66c12bc5396c2387ca51a 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 30.98 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 MC28_3624 5847db1269d66c12bc5396c2387ca51a 189 SUPERFAMILY SSF52374 3 187 9.07E-51 T 14-10-2018 MC28_3624 5847db1269d66c12bc5396c2387ca51a 189 Gene3D G3DSA:3.40.50.620 1 188 6.9E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_3624 5847db1269d66c12bc5396c2387ca51a 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 1.9E-55 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 MC28_3624 5847db1269d66c12bc5396c2387ca51a 189 Pfam PF01467 Cytidylyltransferase-like 6 162 3.1E-33 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MC28_B35 f0d6ceb723227ffee35a079c37a2ce9f 147 SUPERFAMILY SSF110849 100 146 5.76E-8 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily MC28_B35 f0d6ceb723227ffee35a079c37a2ce9f 147 Gene3D G3DSA:3.90.1530.10 80 147 5.1E-6 T 14-10-2018 MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Pfam PF00877 NlpC/P60 family 467 568 1.7E-25 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Gene3D G3DSA:2.30.30.40 281 339 2.4E-15 T 14-10-2018 MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Gene3D G3DSA:2.30.30.40 200 257 1.8E-17 T 14-10-2018 MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Pfam PF08239 Bacterial SH3 domain 371 422 4.2E-13 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Pfam PF08239 Bacterial SH3 domain 290 339 2.5E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Pfam PF08239 Bacterial SH3 domain 55 106 3.3E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Pfam PF08239 Bacterial SH3 domain 207 257 7.5E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Pfam PF08239 Bacterial SH3 domain 128 178 5.0E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Gene3D G3DSA:3.90.1720.10 422 566 4.9E-33 T 14-10-2018 MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Gene3D G3DSA:2.30.30.40 37 108 2.3E-16 T 14-10-2018 MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Gene3D G3DSA:2.30.30.40 121 186 1.3E-16 T 14-10-2018 MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 Gene3D G3DSA:2.30.30.40 365 421 1.2E-17 T 14-10-2018 MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 SUPERFAMILY SSF54001 452 570 2.26E-32 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 SMART SM00287 199 261 5.5E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 SMART SM00287 363 424 9.7E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 SMART SM00287 47 108 2.3E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 SMART SM00287 119 180 2.0E-13 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_4469 d6c08d2ef89777cd1486a396868f8928 572 SMART SM00287 281 342 7.4E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2048 789303bbb4d368e60373942677061ded 598 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 393 592 3.3E-32 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 MC28_2048 789303bbb4d368e60373942677061ded 598 Gene3D G3DSA:3.40.50.1820 307 412 1.7E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2048 789303bbb4d368e60373942677061ded 598 SUPERFAMILY SSF53474 57 416 4.55E-81 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2048 789303bbb4d368e60373942677061ded 598 SUPERFAMILY SSF49785 444 597 1.57E-38 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_2048 789303bbb4d368e60373942677061ded 598 Gene3D G3DSA:2.60.120.260 424 596 1.7E-43 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_2048 789303bbb4d368e60373942677061ded 598 Gene3D G3DSA:3.40.50.1820 75 290 1.3E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2048 789303bbb4d368e60373942677061ded 598 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 88 573 3.7E-29 T 14-10-2018 IPR005674 CocE/Serine esterase GO:0016787 MC28_2048 789303bbb4d368e60373942677061ded 598 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 90 369 1.9E-73 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 MC28_2048 789303bbb4d368e60373942677061ded 598 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 76 86 8.1E-6 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 MC28_2048 789303bbb4d368e60373942677061ded 598 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 110 126 8.1E-6 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 MC28_2048 789303bbb4d368e60373942677061ded 598 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 94 103 8.1E-6 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 MC28_2048 789303bbb4d368e60373942677061ded 598 SMART SM00939 381 593 1.5E-44 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 MC28_4925 ce306a9c0bd49404735b2968b130384d 38 Pfam PF13134 Protein of unknown function (DUF3948) 4 37 1.2E-22 T 14-10-2018 IPR025034 Protein of unknown function DUF3948 MC28_4924 ce306a9c0bd49404735b2968b130384d 38 Pfam PF13134 Protein of unknown function (DUF3948) 4 37 1.2E-22 T 14-10-2018 IPR025034 Protein of unknown function DUF3948 MC28_4927 ce306a9c0bd49404735b2968b130384d 38 Pfam PF13134 Protein of unknown function (DUF3948) 4 37 1.2E-22 T 14-10-2018 IPR025034 Protein of unknown function DUF3948 MC28_4926 ce306a9c0bd49404735b2968b130384d 38 Pfam PF13134 Protein of unknown function (DUF3948) 4 37 1.2E-22 T 14-10-2018 IPR025034 Protein of unknown function DUF3948 MC28_0859 ca3366df1e03e25b8a8d33cb17ced08e 451 Pfam PF01554 MatE 22 183 8.0E-27 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0859 ca3366df1e03e25b8a8d33cb17ced08e 451 Pfam PF01554 MatE 255 404 5.7E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0859 ca3366df1e03e25b8a8d33cb17ced08e 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 416 2.7E-51 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_0859 ca3366df1e03e25b8a8d33cb17ced08e 451 PIRSF PIRSF006603 1 440 7.0E-73 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_3722 e02db64615e1dc414e01b113e233c3ff 380 Gene3D G3DSA:1.10.260.50 14 275 7.3E-121 T 14-10-2018 MC28_3722 e02db64615e1dc414e01b113e233c3ff 380 PIRSF PIRSF005572 1 376 7.6E-117 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 MC28_3722 e02db64615e1dc414e01b113e233c3ff 380 Pfam PF00266 Aminotransferase class-V 3 361 8.7E-73 T 14-10-2018 IPR000192 Aminotransferase class V domain MC28_3722 e02db64615e1dc414e01b113e233c3ff 380 Gene3D G3DSA:3.40.640.10 60 232 7.3E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3722 e02db64615e1dc414e01b113e233c3ff 380 SUPERFAMILY SSF53383 2 370 9.11E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3722 e02db64615e1dc414e01b113e233c3ff 380 Gene3D G3DSA:3.90.1150.10 3 367 7.3E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3773 073b87ec984ccebaa09e2efac7904215 348 SMART SM00909 240 328 2.9E-18 T 14-10-2018 IPR019606 GerMN domain MC28_3773 073b87ec984ccebaa09e2efac7904215 348 SMART SM00909 88 178 1.4E-22 T 14-10-2018 IPR019606 GerMN domain MC28_3773 073b87ec984ccebaa09e2efac7904215 348 Pfam PF10646 Sporulation and spore germination 63 174 3.2E-20 T 14-10-2018 IPR019606 GerMN domain MC28_3773 073b87ec984ccebaa09e2efac7904215 348 Pfam PF10646 Sporulation and spore germination 211 323 8.6E-14 T 14-10-2018 IPR019606 GerMN domain MC28_1326 2c549826cc493e379e16e57db47b860c 127 Gene3D G3DSA:3.10.180.10 1 125 3.2E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1326 2c549826cc493e379e16e57db47b860c 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 120 2.7E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_1326 2c549826cc493e379e16e57db47b860c 127 SUPERFAMILY SSF54593 1 125 1.24E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_4600 b58b4577cad4fb6ebcbfb75e1d7cef71 328 PIRSF PIRSF028757 1 328 3.9E-82 T 14-10-2018 IPR003507 Peptidase family S66 MC28_4600 b58b4577cad4fb6ebcbfb75e1d7cef71 328 Pfam PF02016 LD-carboxypeptidase 12 314 7.2E-76 T 14-10-2018 IPR003507 Peptidase family S66 MC28_4600 b58b4577cad4fb6ebcbfb75e1d7cef71 328 SUPERFAMILY SSF52317 2 165 7.78E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4600 b58b4577cad4fb6ebcbfb75e1d7cef71 328 SUPERFAMILY SSF141986 165 318 2.22E-33 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily MC28_4600 b58b4577cad4fb6ebcbfb75e1d7cef71 328 Gene3D G3DSA:3.40.50.10740 1 158 1.9E-62 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal MC28_4600 b58b4577cad4fb6ebcbfb75e1d7cef71 328 Gene3D G3DSA:3.50.30.60 159 328 5.3E-62 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily MC28_1306 a3b78db51541c96dc0646a65ed6b0bef 160 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 6 159 1.8E-45 T 14-10-2018 IPR018920 ESAT-6 secretion machinery protein EssA/YueC MC28_1306 a3b78db51541c96dc0646a65ed6b0bef 160 Pfam PF10661 WXG100 protein secretion system (Wss), protein EssA 18 160 4.2E-62 T 14-10-2018 IPR034026 ESAT-6 secretion machinery protein EssA MC28_1802 fe9c96c3e40b655dda8d9af938862f73 643 Pfam PF02687 FtsX-like permease family 90 181 2.6E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_1802 fe9c96c3e40b655dda8d9af938862f73 643 PIRSF PIRSF018968 1 641 2.6E-129 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_1423 22195aeea246ec70f9f2079e7109720c 195 SUPERFAMILY SSF52833 37 195 1.92E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_1423 22195aeea246ec70f9f2079e7109720c 195 Pfam PF02630 SCO1/SenC 32 176 3.3E-38 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 MC28_1423 22195aeea246ec70f9f2079e7109720c 195 Gene3D G3DSA:3.40.30.10 27 195 5.0E-57 T 14-10-2018 MC28_4692 599dcd597d7e5abdb834a0fb4b049789 61 TIGRFAM TIGR04129 CxxH_BA5709: CxxH/CxxC protein, BA_5709 family 4 51 1.7E-20 T 14-10-2018 IPR025626 YyzF-like protein MC28_4692 599dcd597d7e5abdb834a0fb4b049789 61 Pfam PF14116 YyzF-like protein 5 52 6.7E-21 T 14-10-2018 IPR025626 YyzF-like protein MC28_3320 2902f6f259d28524db98bf1b81b15462 76 SUPERFAMILY SSF158560 1 71 1.96E-18 T 14-10-2018 MC28_4696 4e889d8662c6a3aea920eb96574231a1 446 Gene3D G3DSA:3.30.310.160 223 362 4.0E-36 T 14-10-2018 MC28_4696 4e889d8662c6a3aea920eb96574231a1 446 Gene3D G3DSA:3.10.450.310 201 398 4.0E-36 T 14-10-2018 MC28_4696 4e889d8662c6a3aea920eb96574231a1 446 Pfam PF07435 YycH protein 2 427 2.3E-73 T 14-10-2018 IPR009996 Regulatory protein YycH MC28_1653 e52424ff455100b6265048327239eca6 185 Pfam PF01381 Helix-turn-helix 12 64 2.0E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1653 e52424ff455100b6265048327239eca6 185 Gene3D G3DSA:1.10.260.40 2 75 7.5E-18 T 14-10-2018 MC28_1653 e52424ff455100b6265048327239eca6 185 SUPERFAMILY SSF51182 51 183 7.56E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_1653 e52424ff455100b6265048327239eca6 185 SMART SM00530 11 66 1.1E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1653 e52424ff455100b6265048327239eca6 185 Pfam PF07883 Cupin domain 117 175 1.8E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_1653 e52424ff455100b6265048327239eca6 185 SUPERFAMILY SSF47413 3 73 2.65E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_1653 e52424ff455100b6265048327239eca6 185 Gene3D G3DSA:2.60.120.10 91 185 5.6E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_4311 679af7ef36c2bcbace5446386d509932 165 Pfam PF02080 TrkA-C domain 89 158 5.3E-16 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 MC28_4311 679af7ef36c2bcbace5446386d509932 165 Gene3D G3DSA:3.30.70.1450 83 161 7.1E-20 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_4311 679af7ef36c2bcbace5446386d509932 165 PIRSF PIRSF005028 1 162 1.1E-56 T 14-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT MC28_4311 679af7ef36c2bcbace5446386d509932 165 SUPERFAMILY SSF116726 77 157 1.57E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 MC28_0874 c240fef32d081eda642704fd2339b617 213 Gene3D G3DSA:3.30.1330.60 53 213 4.3E-43 T 14-10-2018 IPR036737 OmpA-like domain superfamily MC28_0874 c240fef32d081eda642704fd2339b617 213 Pfam PF00691 OmpA family 107 205 9.2E-18 T 14-10-2018 IPR006665 OmpA-like domain MC28_0874 c240fef32d081eda642704fd2339b617 213 SUPERFAMILY SSF103088 95 211 3.79E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily MC28_0874 c240fef32d081eda642704fd2339b617 213 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 1 39 8.6E-8 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain MC28_4320 a74c268268a06065cf5e59323258a992 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 200 400 4.2E-57 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 MC28_4320 a74c268268a06065cf5e59323258a992 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 16 89 3.6E-21 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 MC28_2926 bb879a4581290d6f9f7727de11dec7e6 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 5.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2926 bb879a4581290d6f9f7727de11dec7e6 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 5.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2926 bb879a4581290d6f9f7727de11dec7e6 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 5.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2926 bb879a4581290d6f9f7727de11dec7e6 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 5.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_2926 bb879a4581290d6f9f7727de11dec7e6 259 Gene3D G3DSA:3.40.50.1820 5 256 4.1E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2926 bb879a4581290d6f9f7727de11dec7e6 259 SUPERFAMILY SSF53474 4 255 1.28E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2926 bb879a4581290d6f9f7727de11dec7e6 259 Pfam PF00561 alpha/beta hydrolase fold 21 242 9.9E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1323 f398e7724674155dffe3fa81342864a5 583 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 355 366 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 MC28_1323 f398e7724674155dffe3fa81342864a5 583 Gene3D G3DSA:3.40.50.300 33 465 1.8E-207 T 14-10-2018 MC28_1323 f398e7724674155dffe3fa81342864a5 583 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 28 583 49.271 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 MC28_1323 f398e7724674155dffe3fa81342864a5 583 Gene3D G3DSA:3.30.1510.10 156 274 1.8E-207 T 14-10-2018 MC28_1323 f398e7724674155dffe3fa81342864a5 583 SUPERFAMILY SSF52540 31 581 6.98E-249 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1323 f398e7724674155dffe3fa81342864a5 583 Gene3D G3DSA:3.10.410.10 470 559 2.8E-36 T 14-10-2018 MC28_1323 f398e7724674155dffe3fa81342864a5 583 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 130 140 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 MC28_1323 f398e7724674155dffe3fa81342864a5 583 Pfam PF01268 Formate--tetrahydrofolate ligase 29 583 7.3E-273 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 MC28_3898 e9ffb24e2d53126463c8e8d2a658d854 110 SUPERFAMILY SSF51182 14 97 1.88E-17 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_3898 e9ffb24e2d53126463c8e8d2a658d854 110 Pfam PF07883 Cupin domain 40 87 1.6E-13 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_3898 e9ffb24e2d53126463c8e8d2a658d854 110 Gene3D G3DSA:2.60.120.10 1 104 6.6E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_3313 7f329bc566e3ad560e1ad514e69ffe7c 250 SMART SM00382 39 217 1.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3313 7f329bc566e3ad560e1ad514e69ffe7c 250 Gene3D G3DSA:3.40.50.300 120 235 4.1E-9 T 14-10-2018 MC28_3313 7f329bc566e3ad560e1ad514e69ffe7c 250 Gene3D G3DSA:3.40.50.300 28 119 5.2E-11 T 14-10-2018 MC28_3313 7f329bc566e3ad560e1ad514e69ffe7c 250 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 160 205 3.4E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_3313 7f329bc566e3ad560e1ad514e69ffe7c 250 Pfam PF13476 AAA domain 35 82 1.7E-10 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain MC28_3313 7f329bc566e3ad560e1ad514e69ffe7c 250 SUPERFAMILY SSF52540 34 222 1.74E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3047 b68d996f6ce6a17c030a278924b05ae3 185 Pfam PF01765 Ribosome recycling factor 21 183 3.3E-65 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 MC28_3047 b68d996f6ce6a17c030a278924b05ae3 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.2E-77 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 MC28_3047 b68d996f6ce6a17c030a278924b05ae3 185 Gene3D G3DSA:3.30.1360.40 31 105 1.8E-71 T 14-10-2018 MC28_3047 b68d996f6ce6a17c030a278924b05ae3 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.238 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 MC28_3047 b68d996f6ce6a17c030a278924b05ae3 185 SUPERFAMILY SSF55194 5 184 2.35E-71 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 MC28_3047 b68d996f6ce6a17c030a278924b05ae3 185 Gene3D G3DSA:1.10.132.20 12 182 1.8E-71 T 14-10-2018 MC28_5221 f53b16a598223f4d91da8bd58b418e72 217 SMART SM00530 13 68 7.0E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5221 f53b16a598223f4d91da8bd58b418e72 217 Gene3D G3DSA:1.10.260.40 10 171 5.0E-15 T 14-10-2018 MC28_5221 f53b16a598223f4d91da8bd58b418e72 217 Pfam PF06803 Protein of unknown function (DUF1232) 170 203 1.2E-11 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 MC28_5221 f53b16a598223f4d91da8bd58b418e72 217 SUPERFAMILY SSF47413 7 76 1.55E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_5221 f53b16a598223f4d91da8bd58b418e72 217 Pfam PF01381 Helix-turn-helix 14 68 2.5E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5185 dffe8cb671b5934b6b9e1c18eca1bf72 180 SUPERFAMILY SSF56349 5 178 1.56E-37 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_5185 dffe8cb671b5934b6b9e1c18eca1bf72 180 Pfam PF00589 Phage integrase family 9 167 2.7E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_5185 dffe8cb671b5934b6b9e1c18eca1bf72 180 Gene3D G3DSA:1.10.443.10 4 180 6.9E-31 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_4008 e27764ccb061a95f2126324a7a25c847 118 SMART SM00450 24 118 1.1E-11 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_4008 e27764ccb061a95f2126324a7a25c847 118 Gene3D G3DSA:3.40.250.10 21 117 9.2E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_4008 e27764ccb061a95f2126324a7a25c847 118 Pfam PF00581 Rhodanese-like domain 25 114 2.5E-11 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_4008 e27764ccb061a95f2126324a7a25c847 118 SUPERFAMILY SSF52821 15 114 2.36E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_3788 a44dce9d63545b2f968c6f0e788499a4 294 SMART SM00382 27 205 1.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3788 a44dce9d63545b2f968c6f0e788499a4 294 Pfam PF13732 Domain of unknown function (DUF4162) 211 291 1.2E-14 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 MC28_3788 a44dce9d63545b2f968c6f0e788499a4 294 Gene3D G3DSA:3.40.50.300 1 233 1.1E-58 T 14-10-2018 MC28_3788 a44dce9d63545b2f968c6f0e788499a4 294 SUPERFAMILY SSF52540 3 226 6.71E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3788 a44dce9d63545b2f968c6f0e788499a4 294 Pfam PF00005 ABC transporter 19 157 2.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3788 a44dce9d63545b2f968c6f0e788499a4 294 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_5219 337a58b38b7e18a47f6b82d2786f8894 461 Pfam PF00324 Amino acid permease 1 433 1.9E-127 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_5219 337a58b38b7e18a47f6b82d2786f8894 461 PIRSF PIRSF006060 1 454 7.5E-80 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5219 337a58b38b7e18a47f6b82d2786f8894 461 Gene3D G3DSA:1.20.1740.10 1 455 4.4E-66 T 14-10-2018 MC28_5219 337a58b38b7e18a47f6b82d2786f8894 461 ProSitePatterns PS00218 Amino acid permeases signature. 23 54 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 MC28_2509 15112bc795e6b6bcf00f6f02dbd25009 355 Gene3D G3DSA:2.130.10.10 10 355 9.0E-128 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_2509 15112bc795e6b6bcf00f6f02dbd25009 355 SUPERFAMILY SSF51004 19 354 4.05E-51 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily MC28_2509 15112bc795e6b6bcf00f6f02dbd25009 355 Pfam PF10282 Lactonase, 7-bladed beta-propeller 12 352 2.2E-133 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller MC28_4208 b2d3664377b57ed4f4052a8d33ff3aed 265 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 251 1.2E-84 T 14-10-2018 IPR005226 UPF0014 family MC28_4208 b2d3664377b57ed4f4052a8d33ff3aed 265 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 9 257 2.7E-56 T 14-10-2018 IPR005226 UPF0014 family MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 SUPERFAMILY SSF52096 11 191 3.23E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 14-10-2018 IPR033135 ClpP, histidine active site MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 2.0E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 2.0E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 2.0E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 2.0E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 2.0E-50 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 Pfam PF00574 Clp protease 14 192 1.2E-83 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 Gene3D G3DSA:3.90.226.10 1 193 5.1E-78 T 14-10-2018 MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 1.8E-99 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_1978 d1e36d747730c1d2ed50957609824dc2 193 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 42.821 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_2186 aab2b0ee91af1813bef98b25a7b39d9d 115 Gene3D G3DSA:3.10.180.10 8 115 3.6E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2186 aab2b0ee91af1813bef98b25a7b39d9d 115 SUPERFAMILY SSF54593 6 114 6.34E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_G140 36641459154f4ef1557932e7ea58fc31 207 Pfam PF00486 Transcriptional regulatory protein, C terminal 131 207 4.7E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G140 36641459154f4ef1557932e7ea58fc31 207 Pfam PF00072 Response regulator receiver domain 1 93 1.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G140 36641459154f4ef1557932e7ea58fc31 207 SMART SM00448 1 92 1.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G140 36641459154f4ef1557932e7ea58fc31 207 Gene3D G3DSA:3.40.50.2300 1 109 8.0E-34 T 14-10-2018 MC28_G140 36641459154f4ef1557932e7ea58fc31 207 SMART SM00862 131 207 2.3E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G140 36641459154f4ef1557932e7ea58fc31 207 SUPERFAMILY SSF46894 107 207 1.96E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_G140 36641459154f4ef1557932e7ea58fc31 207 Gene3D G3DSA:1.10.10.10 110 207 5.1E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G140 36641459154f4ef1557932e7ea58fc31 207 SUPERFAMILY SSF52172 1 107 7.68E-36 T 14-10-2018 IPR011006 CheY-like superfamily MC28_E106 b1688fb88c6d12fc31520e31bf061712 141 Pfam PF16219 Domain of unknown function (DUF4879) 30 140 4.2E-24 T 14-10-2018 IPR032624 Protein of unknown function DUF4879 MC28_3613 7171ef6058bc81a8b0cbb0156ff4e623 58 Gene3D G3DSA:1.20.58.110 1 58 2.7E-17 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3613 7171ef6058bc81a8b0cbb0156ff4e623 58 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 1 57 4.0E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3613 7171ef6058bc81a8b0cbb0156ff4e623 58 SUPERFAMILY SSF46992 1 58 4.45E-19 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3613 7171ef6058bc81a8b0cbb0156ff4e623 58 Pfam PF01649 Ribosomal protein S20 1 57 2.4E-16 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3613 7171ef6058bc81a8b0cbb0156ff4e623 58 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 57 2.0E-17 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3493 5e1ecfba1394830c06c9139b5c289018 168 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 9 148 7.0E-60 T 14-10-2018 IPR024563 Uncharacterised protein family YqhR MC28_3493 5e1ecfba1394830c06c9139b5c289018 168 Pfam PF11085 Conserved membrane protein YqhR 16 158 8.1E-42 T 14-10-2018 IPR024563 Uncharacterised protein family YqhR MC28_2993 6e2b241eead952def7ae4260f98de07f 67 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 7 60 2.2E-5 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component MC28_4918 4d645985da2448ccf34eeb8911eb0fad 578 Gene3D G3DSA:3.90.76.10 101 232 7.5E-127 T 14-10-2018 MC28_4918 4d645985da2448ccf34eeb8911eb0fad 578 Gene3D G3DSA:3.10.105.10 328 545 7.5E-127 T 14-10-2018 MC28_4918 4d645985da2448ccf34eeb8911eb0fad 578 SUPERFAMILY SSF53850 68 560 2.09E-121 T 14-10-2018 MC28_4918 4d645985da2448ccf34eeb8911eb0fad 578 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 112 496 1.3E-84 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain MC28_4918 4d645985da2448ccf34eeb8911eb0fad 578 PIRSF PIRSF002741 14 570 1.2E-109 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MC28_4918 4d645985da2448ccf34eeb8911eb0fad 578 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 118 140 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site MC28_4918 4d645985da2448ccf34eeb8911eb0fad 578 Gene3D G3DSA:3.40.190.10 83 559 7.5E-127 T 14-10-2018 MC28_3067 e8b4fd42a7bab738b66bda14ed8e2e08 90 SUPERFAMILY SSF54565 2 86 2.62E-35 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3067 e8b4fd42a7bab738b66bda14ed8e2e08 90 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3067 e8b4fd42a7bab738b66bda14ed8e2e08 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.0E-35 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3067 e8b4fd42a7bab738b66bda14ed8e2e08 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 25.217 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3067 e8b4fd42a7bab738b66bda14ed8e2e08 90 Pfam PF00886 Ribosomal protein S16 9 67 1.2E-26 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3067 e8b4fd42a7bab738b66bda14ed8e2e08 90 Gene3D G3DSA:3.30.1320.10 1 90 1.4E-37 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_0890 410090591757acb4aaa873c1e9c3be0b 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 89 130 1.0E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MC28_0890 410090591757acb4aaa873c1e9c3be0b 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 2 136 3.9E-39 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 MC28_0890 410090591757acb4aaa873c1e9c3be0b 137 Pfam PF00460 Flagella basal body rod protein 5 32 3.4E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MC28_5357 c516e1851568247b5d3c0ec45b3f6d11 553 SUPERFAMILY SSF51445 3 469 1.25E-152 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_5357 c516e1851568247b5d3c0ec45b3f6d11 553 SMART SM00642 11 411 4.6E-151 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_5357 c516e1851568247b5d3c0ec45b3f6d11 553 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 4 550 6.7E-273 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 MC28_5357 c516e1851568247b5d3c0ec45b3f6d11 553 Gene3D G3DSA:3.90.400.10 103 167 6.0E-187 T 14-10-2018 MC28_5357 c516e1851568247b5d3c0ec45b3f6d11 553 Pfam PF00128 Alpha amylase, catalytic domain 26 369 5.1E-125 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_5357 c516e1851568247b5d3c0ec45b3f6d11 553 Pfam PF16657 Maltogenic Amylase, C-terminal domain 472 547 1.6E-7 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal MC28_5357 c516e1851568247b5d3c0ec45b3f6d11 553 Gene3D G3DSA:3.20.20.80 4 464 6.0E-187 T 14-10-2018 MC28_5357 c516e1851568247b5d3c0ec45b3f6d11 553 SUPERFAMILY SSF51011 472 550 1.57E-18 T 14-10-2018 MC28_5357 c516e1851568247b5d3c0ec45b3f6d11 553 Gene3D G3DSA:2.60.40.1180 473 553 2.1E-23 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_4638 1656faed0cb16c335a1f8de3f4f734c3 301 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 43.398 T 14-10-2018 IPR033752 MetA family MC28_4638 1656faed0cb16c335a1f8de3f4f734c3 301 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.5E-133 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 MC28_4638 1656faed0cb16c335a1f8de3f4f734c3 301 PIRSF PIRSF000450 1 301 1.8E-147 T 14-10-2018 IPR033752 MetA family MC28_4638 1656faed0cb16c335a1f8de3f4f734c3 301 SUPERFAMILY SSF52317 17 297 9.7E-105 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4638 1656faed0cb16c335a1f8de3f4f734c3 301 Gene3D G3DSA:3.40.50.880 1 301 4.2E-130 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4638 1656faed0cb16c335a1f8de3f4f734c3 301 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.5E-141 T 14-10-2018 IPR033752 MetA family MC28_4638 1656faed0cb16c335a1f8de3f4f734c3 301 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-145 T 14-10-2018 MC28_E146 c827bfb4a11c910325a4c817c81252e6 109 Pfam PF12840 Helix-turn-helix domain 29 87 3.3E-10 T 14-10-2018 MC28_E146 c827bfb4a11c910325a4c817c81252e6 109 SMART SM00418 29 108 4.8E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_E146 c827bfb4a11c910325a4c817c81252e6 109 Gene3D G3DSA:1.10.10.10 7 107 2.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_E146 c827bfb4a11c910325a4c817c81252e6 109 SUPERFAMILY SSF46785 12 105 5.54E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_E146 c827bfb4a11c910325a4c817c81252e6 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 46 3.0E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_E146 c827bfb4a11c910325a4c817c81252e6 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 3.0E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_E146 c827bfb4a11c910325a4c817c81252e6 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 79 94 3.0E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_1946 bd9dab04781f2e31faa7de34e6bceb1e 446 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 438 1.3E-148 T 14-10-2018 IPR014239 Spore germination YpeB GO:0009847 MC28_1946 bd9dab04781f2e31faa7de34e6bceb1e 446 Pfam PF14620 YpeB sporulation 14 372 1.6E-137 T 14-10-2018 IPR014239 Spore germination YpeB GO:0009847 MC28_0480 007d27734513ad52614372e79e27ad5f 513 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 59 227 1.8E-50 T 14-10-2018 IPR020051 SagB-type dehydrogenase domain MC28_0480 007d27734513ad52614372e79e27ad5f 513 SUPERFAMILY SSF55469 314 506 1.17E-10 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_0480 007d27734513ad52614372e79e27ad5f 513 Pfam PF00881 Nitroreductase family 410 499 2.1E-8 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_0480 007d27734513ad52614372e79e27ad5f 513 Gene3D G3DSA:3.40.109.10 283 502 1.8E-24 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_0480 007d27734513ad52614372e79e27ad5f 513 Gene3D G3DSA:3.40.109.10 22 282 2.7E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_D137 db57b159593e08ac133d99322ee41407 155 SMART SM00506 2 136 1.5E-16 T 14-10-2018 IPR002589 Macro domain MC28_D137 db57b159593e08ac133d99322ee41407 155 Gene3D G3DSA:3.40.220.10 1 154 3.4E-38 T 14-10-2018 MC28_D137 db57b159593e08ac133d99322ee41407 155 Pfam PF01661 Macro domain 21 135 1.3E-18 T 14-10-2018 IPR002589 Macro domain MC28_D137 db57b159593e08ac133d99322ee41407 155 SUPERFAMILY SSF52949 1 150 1.53E-32 T 14-10-2018 MC28_3506 2c646254bd3fb91b4228849069c590e4 193 SUPERFAMILY SSF46689 2 64 1.21E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3506 2c646254bd3fb91b4228849069c590e4 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 51 4.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3506 2c646254bd3fb91b4228849069c590e4 193 Gene3D G3DSA:1.10.357.10 53 191 7.0E-17 T 14-10-2018 MC28_3506 2c646254bd3fb91b4228849069c590e4 193 Gene3D G3DSA:1.10.10.60 1 52 7.4E-16 T 14-10-2018 MC28_3506 2c646254bd3fb91b4228849069c590e4 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3506 2c646254bd3fb91b4228849069c590e4 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0385 5d68f4d1eb614a4a7c4a743a6bd1657e 299 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 240 294 1.2E-18 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_0385 5d68f4d1eb614a4a7c4a743a6bd1657e 299 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 28 234 1.5E-57 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_0385 5d68f4d1eb614a4a7c4a743a6bd1657e 299 PIRSF PIRSF006483 10 299 1.0E-93 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_0385 5d68f4d1eb614a4a7c4a743a6bd1657e 299 Gene3D G3DSA:3.30.70.120 212 286 5.6E-19 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_0132 8c7ee34733a7327c6df24a16357701de 207 Gene3D G3DSA:1.10.3720.10 1 204 1.2E-53 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0132 8c7ee34733a7327c6df24a16357701de 207 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 20 201 5.3E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0132 8c7ee34733a7327c6df24a16357701de 207 SUPERFAMILY SSF161098 3 202 6.02E-46 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0132 8c7ee34733a7327c6df24a16357701de 207 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 2 96 5.5E-32 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 MC28_2210 bd69c8555dc8673488c9d3d2fbc01678 388 Gene3D G3DSA:3.40.710.10 45 388 1.2E-128 T 14-10-2018 MC28_2210 bd69c8555dc8673488c9d3d2fbc01678 388 Pfam PF00144 Beta-lactamase 53 370 8.6E-65 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_2210 bd69c8555dc8673488c9d3d2fbc01678 388 SUPERFAMILY SSF56601 52 374 5.29E-79 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_4333 10bca98b03f7bbb9e1f1251d35328304 305 Pfam PF01565 FAD binding domain 38 166 4.8E-27 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 MC28_4333 10bca98b03f7bbb9e1f1251d35328304 305 SUPERFAMILY SSF56194 199 302 8.37E-38 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4333 10bca98b03f7bbb9e1f1251d35328304 305 Gene3D G3DSA:3.90.78.10 218 305 6.9E-35 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4333 10bca98b03f7bbb9e1f1251d35328304 305 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 305 95.33 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4333 10bca98b03f7bbb9e1f1251d35328304 305 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 300 3.2E-30 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4333 10bca98b03f7bbb9e1f1251d35328304 305 Gene3D G3DSA:3.30.465.10 91 217 7.6E-44 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 MC28_4333 10bca98b03f7bbb9e1f1251d35328304 305 Gene3D G3DSA:3.30.43.10 1 89 1.4E-26 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 MC28_4333 10bca98b03f7bbb9e1f1251d35328304 305 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 25 301 6.3E-78 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4333 10bca98b03f7bbb9e1f1251d35328304 305 SUPERFAMILY SSF56176 3 194 2.98E-48 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_3073 1ae876407cd1c445ecb71bd2b1272e28 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 1.2E-33 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 MC28_3073 1ae876407cd1c445ecb71bd2b1272e28 77 SUPERFAMILY SSF47336 2 77 1.09E-21 T 14-10-2018 IPR036736 ACP-like superfamily MC28_3073 1ae876407cd1c445ecb71bd2b1272e28 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.9E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain MC28_3073 1ae876407cd1c445ecb71bd2b1272e28 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.155 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 MC28_3073 1ae876407cd1c445ecb71bd2b1272e28 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site MC28_3073 1ae876407cd1c445ecb71bd2b1272e28 77 Gene3D G3DSA:1.10.1200.10 1 77 2.0E-27 T 14-10-2018 IPR036736 ACP-like superfamily MC28_3073 1ae876407cd1c445ecb71bd2b1272e28 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 2.0E-13 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 MC28_4335 aed3cd095124534280f6aa54f679a60c 500 SUPERFAMILY SSF58104 205 496 1.96E-54 T 14-10-2018 MC28_4335 aed3cd095124534280f6aa54f679a60c 500 SMART SM00283 227 492 2.2E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4335 aed3cd095124534280f6aa54f679a60c 500 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 299 455 1.4E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4335 aed3cd095124534280f6aa54f679a60c 500 Pfam PF13295 Domain of unknown function (DUF4077) 2 173 7.2E-86 T 14-10-2018 IPR025278 Domain of unknown function DUF4077 MC28_4335 aed3cd095124534280f6aa54f679a60c 500 Gene3D G3DSA:1.10.287.950 174 500 1.6E-50 T 14-10-2018 MC28_4920 a0da75c6abb3f6a9f2910fad191e387a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 306 3.4E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_4920 a0da75c6abb3f6a9f2910fad191e387a 306 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 72 6.5E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain MC28_4920 a0da75c6abb3f6a9f2910fad191e387a 306 SUPERFAMILY SSF161098 90 284 3.14E-23 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4920 a0da75c6abb3f6a9f2910fad191e387a 306 Gene3D G3DSA:1.10.3720.10 84 306 4.8E-23 T 14-10-2018 IPR035906 MetI-like superfamily MC28_5111 9a6a84a0806d81c9fcc86befad4275e6 104 SUPERFAMILY SSF52833 5 100 5.32E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_5111 9a6a84a0806d81c9fcc86befad4275e6 104 Pfam PF00085 Thioredoxin 14 99 1.8E-5 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 MC28_5111 9a6a84a0806d81c9fcc86befad4275e6 104 Gene3D G3DSA:3.40.30.10 1 104 2.3E-20 T 14-10-2018 MC28_5261 b01c9df8aa378fa7b44685cf107b2d82 144 Pfam PF01475 Ferric uptake regulator family 18 135 1.1E-40 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 MC28_5261 b01c9df8aa378fa7b44685cf107b2d82 144 SUPERFAMILY SSF46785 10 140 1.84E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5261 b01c9df8aa378fa7b44685cf107b2d82 144 Gene3D G3DSA:1.10.10.10 3 89 1.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5261 b01c9df8aa378fa7b44685cf107b2d82 144 Gene3D G3DSA:3.30.1490.190 90 144 8.1E-24 T 14-10-2018 MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 SUPERFAMILY SSF46785 1 87 3.86E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 Pfam PF03466 LysR substrate binding domain 87 290 3.5E-30 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 SUPERFAMILY SSF53850 87 290 1.32E-26 T 14-10-2018 MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 Gene3D G3DSA:3.40.190.10 160 267 7.2E-33 T 14-10-2018 MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 Gene3D G3DSA:1.10.10.10 1 91 4.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1115 1cf0ed48ce9550d29bd783c7aab1a35c 291 Gene3D G3DSA:3.40.190.10 92 289 7.2E-33 T 14-10-2018 MC28_3643 18f2cf534a2b13f1e1d856e6bdc43f39 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 75 1.4E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_3643 18f2cf534a2b13f1e1d856e6bdc43f39 200 Gene3D G3DSA:3.40.50.1240 2 198 4.9E-17 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_3643 18f2cf534a2b13f1e1d856e6bdc43f39 200 SMART SM00855 4 168 6.3E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_3643 18f2cf534a2b13f1e1d856e6bdc43f39 200 SUPERFAMILY SSF53254 3 183 1.61E-17 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_1118 74ff1ec1cdaa3203f8cafa0740f3e42c 233 Pfam PF02525 Flavodoxin-like fold 28 228 1.4E-39 T 14-10-2018 IPR003680 Flavodoxin-like fold MC28_1118 74ff1ec1cdaa3203f8cafa0740f3e42c 233 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 27 233 27.242 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 MC28_1118 74ff1ec1cdaa3203f8cafa0740f3e42c 233 Gene3D G3DSA:3.40.50.360 23 233 1.0E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_1118 74ff1ec1cdaa3203f8cafa0740f3e42c 233 SUPERFAMILY SSF52218 26 233 1.12E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0412 59038877d1194df950fb301fd0153a94 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 37.166 T 14-10-2018 IPR023731 Regulatory protein Spx GO:0045892 MC28_0412 59038877d1194df950fb301fd0153a94 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 8.9E-35 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR MC28_0412 59038877d1194df950fb301fd0153a94 131 Pfam PF03960 ArsC family 5 113 9.4E-21 T 14-10-2018 IPR006660 Arsenate reductase-like MC28_0412 59038877d1194df950fb301fd0153a94 131 SUPERFAMILY SSF52833 1 129 3.3E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_0412 59038877d1194df950fb301fd0153a94 131 Gene3D G3DSA:3.40.30.10 1 131 6.4E-45 T 14-10-2018 MC28_0834 f2a6064baca87795db7bc10b3adebd8a 241 SUPERFAMILY SSF81665 37 76 1.57E-5 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 MC28_0834 f2a6064baca87795db7bc10b3adebd8a 241 Gene3D G3DSA:2.70.150.10 33 237 3.4E-32 T 14-10-2018 MC28_0834 f2a6064baca87795db7bc10b3adebd8a 241 Pfam PF00690 Cation transporter/ATPase, N-terminus 39 77 2.0E-6 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 MC28_0834 f2a6064baca87795db7bc10b3adebd8a 241 SUPERFAMILY SSF81653 126 231 1.31E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 MC28_0834 f2a6064baca87795db7bc10b3adebd8a 241 Pfam PF00122 E1-E2 ATPase 125 232 1.9E-22 T 14-10-2018 MC28_G135 1dd2ed9081ef647dd6e7eb3b2cf2f183 593 PIRSF PIRSF018968 2 591 4.1E-112 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_G135 1dd2ed9081ef647dd6e7eb3b2cf2f183 593 Pfam PF02687 FtsX-like permease family 36 127 5.1E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_5149 33423a095b9ed0eab0172ef540d2751c 266 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 38 260 5.6E-114 T 14-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA MC28_5149 33423a095b9ed0eab0172ef540d2751c 266 SUPERFAMILY SSF88713 58 261 9.46E-66 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MC28_5149 33423a095b9ed0eab0172ef540d2751c 266 Gene3D G3DSA:3.20.20.370 25 266 4.5E-97 T 14-10-2018 MC28_5149 33423a095b9ed0eab0172ef540d2751c 266 Pfam PF01522 Polysaccharide deacetylase 70 191 1.8E-34 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 MC28_G163 ea05b28a25f9b65ea8b1c8cd52ab3533 277 Gene3D G3DSA:1.10.1660.10 1 120 1.2E-20 T 14-10-2018 MC28_G163 ea05b28a25f9b65ea8b1c8cd52ab3533 277 SUPERFAMILY SSF55136 154 269 3.66E-9 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_G163 ea05b28a25f9b65ea8b1c8cd52ab3533 277 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 7.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_G163 ea05b28a25f9b65ea8b1c8cd52ab3533 277 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 31 7.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_G163 ea05b28a25f9b65ea8b1c8cd52ab3533 277 SUPERFAMILY SSF46955 7 114 2.2E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_G163 ea05b28a25f9b65ea8b1c8cd52ab3533 277 SMART SM00422 6 74 4.9E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_G163 ea05b28a25f9b65ea8b1c8cd52ab3533 277 Pfam PF13411 MerR HTH family regulatory protein 9 72 3.6E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_G163 ea05b28a25f9b65ea8b1c8cd52ab3533 277 Gene3D G3DSA:3.20.80.10 121 273 8.5E-7 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_0259 4af2e20d7ace542c040edc8ca9f4e077 314 Gene3D G3DSA:3.10.180.10 5 310 8.8E-130 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0259 4af2e20d7ace542c040edc8ca9f4e077 314 SUPERFAMILY SSF54593 2 299 1.23E-45 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0259 4af2e20d7ace542c040edc8ca9f4e077 314 Gene3D G3DSA:3.10.180.10 66 215 8.8E-130 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0259 4af2e20d7ace542c040edc8ca9f4e077 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 118 5.5E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_0259 4af2e20d7ace542c040edc8ca9f4e077 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 157 271 1.5E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_F024 25904c474a85cb1689d5d4ce9baaf8a4 409 Pfam PF01548 Transposase 5 164 4.7E-34 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 MC28_F024 25904c474a85cb1689d5d4ce9baaf8a4 409 Pfam PF02371 Transposase IS116/IS110/IS902 family 280 364 9.5E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 MC28_2228 0b26d44a8f381ff5159d8b56e4d12882 155 Gene3D G3DSA:3.90.79.10 1 155 3.6E-37 T 14-10-2018 MC28_2228 0b26d44a8f381ff5159d8b56e4d12882 155 Pfam PF00293 NUDIX domain 17 129 6.0E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_2228 0b26d44a8f381ff5159d8b56e4d12882 155 SUPERFAMILY SSF55811 15 147 2.03E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_G037 0953961bc11241f5d35389452361fd0e 467 Gene3D G3DSA:3.40.50.2000 296 417 1.8E-5 T 14-10-2018 MC28_G037 0953961bc11241f5d35389452361fd0e 467 SUPERFAMILY SSF53756 204 448 1.44E-19 T 14-10-2018 MC28_G037 0953961bc11241f5d35389452361fd0e 467 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 263 447 1.1E-8 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 MC28_0713 44fb36114647dff6aa3d076283493393 193 Gene3D G3DSA:1.20.1200.10 12 193 1.7E-72 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 MC28_0713 44fb36114647dff6aa3d076283493393 193 Pfam PF01923 Cobalamin adenosyltransferase 4 166 2.8E-57 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 MC28_0713 44fb36114647dff6aa3d076283493393 193 SUPERFAMILY SSF89028 1 178 1.84E-63 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 MC28_0713 44fb36114647dff6aa3d076283493393 193 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 179 8.0E-90 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 MC28_0713 44fb36114647dff6aa3d076283493393 193 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 177 2.8E-63 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 MC28_1276 bbbe06e6f5335b5d84592a034825548e 181 Gene3D G3DSA:1.20.120.450 14 156 6.2E-17 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1276 bbbe06e6f5335b5d84592a034825548e 181 SUPERFAMILY SSF109854 13 156 2.93E-22 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1276 bbbe06e6f5335b5d84592a034825548e 181 Pfam PF07609 Protein of unknown function (DUF1572) 9 170 1.4E-75 T 14-10-2018 IPR011466 Protein of unknown function DUF1572 MC28_3498 0001d35121ca71d25a49db3afd2fb788 352 Gene3D G3DSA:3.80.30.30 126 352 9.5E-92 T 14-10-2018 MC28_3498 0001d35121ca71d25a49db3afd2fb788 352 Gene3D G3DSA:3.40.50.12110 13 125 1.0E-48 T 14-10-2018 MC28_3498 0001d35121ca71d25a49db3afd2fb788 352 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 15 352 1.5E-161 T 14-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 MC28_1472 cf285f8f4709f4fd348fe78a4ecb54dc 63 SUPERFAMILY SSF140652 1 62 1.57E-20 T 14-10-2018 IPR036806 YozE SAM-like superfamily MC28_1472 cf285f8f4709f4fd348fe78a4ecb54dc 63 Pfam PF06855 YozE SAM-like fold 1 61 4.9E-20 T 14-10-2018 IPR023089 YozE SAM-like domain MC28_1472 cf285f8f4709f4fd348fe78a4ecb54dc 63 Gene3D G3DSA:1.10.150.260 1 62 1.2E-19 T 14-10-2018 IPR036806 YozE SAM-like superfamily MC28_3335 2cc10823045f37298f3bca2f265cd2ab 378 SUPERFAMILY SSF56601 61 363 8.63E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_3335 2cc10823045f37298f3bca2f265cd2ab 378 Gene3D G3DSA:3.40.710.10 62 366 1.1E-77 T 14-10-2018 MC28_3335 2cc10823045f37298f3bca2f265cd2ab 378 Pfam PF00144 Beta-lactamase 79 363 2.2E-53 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_4016 97ae65aa08f52567048f9b3eddb0ac02 140 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 14 93 2.4E-22 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 MC28_4016 97ae65aa08f52567048f9b3eddb0ac02 140 Gene3D G3DSA:1.10.3420.10 57 137 1.8E-37 T 14-10-2018 IPR023292 NTP pyrophosphohydrolase-like domain superfamily MC28_4016 97ae65aa08f52567048f9b3eddb0ac02 140 Gene3D G3DSA:1.10.3420.10 5 56 1.8E-8 T 14-10-2018 IPR023292 NTP pyrophosphohydrolase-like domain superfamily MC28_0428 de85ba8d70effb267b9bc752235a9bee 386 Pfam PF01098 Cell cycle protein 15 380 4.4E-88 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_0428 de85ba8d70effb267b9bc752235a9bee 386 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 338 362 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_5161 268001b6ce0f685f63d2fde3e90965c7 267 SMART SM01040 16 102 5.4E-12 T 14-10-2018 IPR003497 BRO N-terminal domain MC28_5161 268001b6ce0f685f63d2fde3e90965c7 267 Pfam PF03374 Phage antirepressor protein KilAC domain 152 254 1.4E-30 T 14-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 MC28_5161 268001b6ce0f685f63d2fde3e90965c7 267 Pfam PF02498 BRO family, N-terminal domain 22 102 8.2E-9 T 14-10-2018 IPR003497 BRO N-terminal domain MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 Pfam PF07687 Peptidase dimerisation domain 182 273 1.2E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 SUPERFAMILY SSF53187 5 371 1.96E-65 T 14-10-2018 MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 PIRSF PIRSF001123 4 96 0.031 T 14-10-2018 IPR008007 Peptidase M42 MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 PIRSF PIRSF001123 262 372 2.6E-5 T 14-10-2018 IPR008007 Peptidase M42 MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 PIRSF PIRSF001123 80 224 5.0E-5 T 14-10-2018 IPR008007 Peptidase M42 MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 Pfam PF01546 Peptidase family M20/M25/M40 74 368 2.2E-24 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 Gene3D G3DSA:3.30.70.360 177 288 1.7E-142 T 14-10-2018 MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 368 8.7E-169 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 SUPERFAMILY SSF55031 180 285 3.66E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_3438 8523f4821aeabb34e785f7a0e9a9611d 372 Gene3D G3DSA:3.40.630.10 14 363 1.7E-142 T 14-10-2018 MC28_4472 caf2bbdfcf0e45caf119fae57af36760 432 SUPERFAMILY SSF53448 63 339 4.88E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4472 caf2bbdfcf0e45caf119fae57af36760 432 Gene3D G3DSA:3.90.550.10 57 279 3.1E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_4472 caf2bbdfcf0e45caf119fae57af36760 432 Pfam PF13641 Glycosyltransferase like family 2 68 293 1.7E-33 T 14-10-2018 MC28_4524 b4b17b717bffbe85f5271771d43f4a15 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 402 42.358 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4524 b4b17b717bffbe85f5271771d43f4a15 419 Gene3D G3DSA:3.65.10.10 6 216 2.0E-173 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 MC28_4524 b4b17b717bffbe85f5271771d43f4a15 419 SUPERFAMILY SSF55205 1 403 2.45E-137 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 MC28_4524 b4b17b717bffbe85f5271771d43f4a15 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 401 4.8E-171 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_4524 b4b17b717bffbe85f5271771d43f4a15 419 Gene3D G3DSA:3.65.10.10 3 399 2.0E-173 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 MC28_4524 b4b17b717bffbe85f5271771d43f4a15 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 1 392 8.6E-114 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 MC28_G096 ac49ef157faec33064accc6a97de9fd5 314 Gene3D G3DSA:3.90.245.10 2 312 6.9E-65 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_G096 ac49ef157faec33064accc6a97de9fd5 314 SUPERFAMILY SSF53590 2 309 5.62E-69 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_G096 ac49ef157faec33064accc6a97de9fd5 314 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 303 4.0E-58 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain MC28_5405 bea08f51e5f6f3ddf57d4cf1195a438b 383 Pfam PF06271 RDD family 215 369 3.5E-12 T 14-10-2018 IPR010432 RDD MC28_5405 bea08f51e5f6f3ddf57d4cf1195a438b 383 Pfam PF04892 VanZ like family 49 194 2.3E-23 T 14-10-2018 IPR006976 VanZ-like MC28_5405 bea08f51e5f6f3ddf57d4cf1195a438b 383 PIRSF PIRSF031578 1 383 3.6E-152 T 14-10-2018 IPR021192 Uncharacterised conserved protein UCP031578, VanZ/RDD-type MC28_B02 2e37ac22e5baacb61f9a7d6e4641abdf 396 Pfam PF14550 Putative phage serine protease XkdF 44 154 1.4E-37 T 14-10-2018 IPR027924 Phage-like element PBSX protein, XkdF MC28_3179 eed7cdb3ce4b2a9ba083e960c10559b4 169 Gene3D G3DSA:1.10.443.10 2 169 5.3E-30 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_3179 eed7cdb3ce4b2a9ba083e960c10559b4 169 SUPERFAMILY SSF56349 4 167 5.0E-37 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_3179 eed7cdb3ce4b2a9ba083e960c10559b4 169 Pfam PF00589 Phage integrase family 3 153 4.5E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_3948 a1989bd5c7a58dbfdc3f7f261dff909a 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 2.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3948 a1989bd5c7a58dbfdc3f7f261dff909a 232 Gene3D G3DSA:1.10.10.10 133 232 5.1E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3948 a1989bd5c7a58dbfdc3f7f261dff909a 232 Pfam PF00072 Response regulator receiver domain 7 116 1.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3948 a1989bd5c7a58dbfdc3f7f261dff909a 232 SUPERFAMILY SSF52172 5 133 5.41E-40 T 14-10-2018 IPR011006 CheY-like superfamily MC28_3948 a1989bd5c7a58dbfdc3f7f261dff909a 232 SUPERFAMILY SSF46894 131 231 5.1E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_3948 a1989bd5c7a58dbfdc3f7f261dff909a 232 SMART SM00862 154 230 2.1E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3948 a1989bd5c7a58dbfdc3f7f261dff909a 232 SMART SM00448 5 115 4.2E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3948 a1989bd5c7a58dbfdc3f7f261dff909a 232 Gene3D G3DSA:3.40.50.2300 2 132 9.1E-37 T 14-10-2018 MC28_0765 1ec404e7a395f49a019c827c7240c9c4 123 SUPERFAMILY SSF101386 11 114 1.14E-28 T 14-10-2018 MC28_0765 1ec404e7a395f49a019c827c7240c9c4 123 PIRSF PIRSF029904 11 121 9.3E-56 T 14-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD MC28_0765 1ec404e7a395f49a019c827c7240c9c4 123 Gene3D G3DSA:1.10.287.1080 12 123 3.5E-35 T 14-10-2018 MC28_0765 1ec404e7a395f49a019c827c7240c9c4 123 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 35 114 8.5E-20 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core MC28_3661 7cd6dc3aa27f8e3d1d733140d9e3eddc 76 Pfam PF14143 YrhC-like protein 3 74 2.9E-26 T 14-10-2018 IPR025418 YrhC-like protein MC28_3897 effdad7af415ecfb419a3cb9e11d2102 262 Gene3D G3DSA:3.40.630.30 113 246 6.7E-37 T 14-10-2018 MC28_3897 effdad7af415ecfb419a3cb9e11d2102 262 Pfam PF12746 GNAT acetyltransferase 20 254 6.5E-58 T 14-10-2018 IPR027365 GNAT acetyltransferase YdfB-like MC28_3897 effdad7af415ecfb419a3cb9e11d2102 262 SUPERFAMILY SSF55729 130 247 5.93E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_D106 35c826219d00f6d2bdf920687ef89a66 892 ProDom PD322775 PLASMID PXO2-28/BXB0027/GBAA_PXO2_0027 PXO2-28 533 891 6.0E-104 T 14-10-2018 MC28_D106 35c826219d00f6d2bdf920687ef89a66 892 Gene3D G3DSA:2.60.40.740 308 457 6.4E-7 T 14-10-2018 MC28_2289 c4e0e494bc06679a18460c3db9d72ac1 795 Pfam PF05547 Immune inhibitor A peptidase M6 148 791 5.2E-297 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 MC28_2289 c4e0e494bc06679a18460c3db9d72ac1 795 SUPERFAMILY SSF55486 262 429 8.35E-17 T 14-10-2018 MC28_2289 c4e0e494bc06679a18460c3db9d72ac1 795 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 183 492 4.2E-85 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 MC28_2289 c4e0e494bc06679a18460c3db9d72ac1 795 PIRSF PIRSF007519 1 795 0.0 T 14-10-2018 IPR012300 Peptidase M6, InhA MC28_1229 f6a1ca381ed0bf1d694b56362fc43e59 166 Pfam PF04978 Protein of unknown function (DUF664) 11 156 2.5E-14 T 14-10-2018 IPR007061 Protein of unknown function DUF664 MC28_1229 f6a1ca381ed0bf1d694b56362fc43e59 166 SUPERFAMILY SSF109854 2 160 5.04E-37 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1229 f6a1ca381ed0bf1d694b56362fc43e59 166 Gene3D G3DSA:1.20.120.450 1 161 3.2E-41 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 Pfam PF01037 Lrp/AsnC ligand binding domain 92 151 1.6E-6 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 20 66 9.0E-15 T 14-10-2018 MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 46 65 2.0E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 35 2.0E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 46 2.0E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 SMART SM00344 19 126 1.5E-29 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 Gene3D G3DSA:3.30.70.920 69 159 1.4E-13 T 14-10-2018 MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 SUPERFAMILY SSF54909 81 154 5.23E-9 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 SUPERFAMILY SSF46785 18 77 8.44E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4348 e97f1cc0bba9c975097b04b12aac7ff8 159 Gene3D G3DSA:1.10.10.10 14 68 8.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3042 10ebd12d31392a932683f41cf35dc981 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 PIRSF PIRSF001535 1 566 1.9E-268 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 Gene3D G3DSA:3.40.50.800 4 550 1.0E-256 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily MC28_3042 10ebd12d31392a932683f41cf35dc981 566 SUPERFAMILY SSF55681 9 475 4.35E-103 T 14-10-2018 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 Pfam PF03129 Anticodon binding domain 472 563 1.2E-20 T 14-10-2018 IPR004154 Anticodon-binding MC28_3042 10ebd12d31392a932683f41cf35dc981 566 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 562 4.1E-243 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 Gene3D G3DSA:3.90.960.10 240 386 1.0E-256 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 Pfam PF04073 Aminoacyl-tRNA editing domain 257 374 2.5E-28 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 9.3E-57 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 566 41.436 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 Gene3D G3DSA:3.30.930.10 11 462 1.0E-256 T 14-10-2018 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 SUPERFAMILY SSF55826 218 386 6.15E-34 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 MC28_3042 10ebd12d31392a932683f41cf35dc981 566 SUPERFAMILY SSF52954 460 565 1.15E-30 T 14-10-2018 MC28_1773 7b9653bf51e4fda9de05332454d5c0a2 121 SUPERFAMILY SSF46785 18 116 9.41E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1773 7b9653bf51e4fda9de05332454d5c0a2 121 Gene3D G3DSA:1.10.10.10 4 121 6.1E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1773 7b9653bf51e4fda9de05332454d5c0a2 121 Pfam PF01638 HxlR-like helix-turn-helix 26 114 3.5E-34 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type MC28_1436 4863cfcf1e80e9081de06d543323de96 374 Gene3D G3DSA:3.30.565.10 245 374 5.1E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1436 4863cfcf1e80e9081de06d543323de96 374 Gene3D G3DSA:3.30.450.40 11 180 3.1E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_1436 4863cfcf1e80e9081de06d543323de96 374 Pfam PF07730 Histidine kinase 186 250 8.4E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MC28_1436 4863cfcf1e80e9081de06d543323de96 374 SMART SM00387 283 374 0.0084 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_1436 4863cfcf1e80e9081de06d543323de96 374 SUPERFAMILY SSF55781 29 174 1.55E-19 T 14-10-2018 MC28_1436 4863cfcf1e80e9081de06d543323de96 374 SUPERFAMILY SSF55874 254 373 9.82E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_1436 4863cfcf1e80e9081de06d543323de96 374 SMART SM00065 28 179 2.1E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_1436 4863cfcf1e80e9081de06d543323de96 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 373 7.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1436 4863cfcf1e80e9081de06d543323de96 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 354 7.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1436 4863cfcf1e80e9081de06d543323de96 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 333 7.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_1436 4863cfcf1e80e9081de06d543323de96 374 Pfam PF13185 GAF domain 27 170 4.2E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 MC28_1436 4863cfcf1e80e9081de06d543323de96 374 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 288 373 4.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_3786 18de094c5f2379026738ef7234531046 151 SUPERFAMILY SSF46785 11 145 3.69E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3786 18de094c5f2379026738ef7234531046 151 Gene3D G3DSA:1.10.10.10 4 151 5.2E-59 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3786 18de094c5f2379026738ef7234531046 151 Pfam PF02082 Transcriptional regulator 9 89 7.8E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type MC28_D127 50a4e5865aa48eb825efec065aa04d26 252 Pfam PF00877 NlpC/P60 family 141 248 1.9E-27 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_D127 50a4e5865aa48eb825efec065aa04d26 252 Gene3D G3DSA:3.90.1720.10 121 252 2.3E-42 T 14-10-2018 MC28_D127 50a4e5865aa48eb825efec065aa04d26 252 SUPERFAMILY SSF54001 122 250 8.83E-38 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_D127 50a4e5865aa48eb825efec065aa04d26 252 Pfam PF13702 Lysozyme-like 1 113 1.3E-29 T 14-10-2018 MC28_D127 50a4e5865aa48eb825efec065aa04d26 252 Gene3D G3DSA:1.10.530.10 1 115 5.6E-23 T 14-10-2018 MC28_5028 36a9ad64a37e379f4e4ad312a1c6cf72 284 PIRSF PIRSF002854 1 274 1.3E-103 T 14-10-2018 IPR004872 Lipoprotein NlpA family MC28_5028 36a9ad64a37e379f4e4ad312a1c6cf72 284 Gene3D G3DSA:3.40.190.10 112 222 3.4E-99 T 14-10-2018 MC28_5028 36a9ad64a37e379f4e4ad312a1c6cf72 284 Pfam PF03180 NLPA lipoprotein 35 270 6.3E-84 T 14-10-2018 IPR004872 Lipoprotein NlpA family MC28_5028 36a9ad64a37e379f4e4ad312a1c6cf72 284 SUPERFAMILY SSF53850 35 273 8.01E-82 T 14-10-2018 MC28_5028 36a9ad64a37e379f4e4ad312a1c6cf72 284 Gene3D G3DSA:3.40.190.10 36 264 3.4E-99 T 14-10-2018 MC28_1477 51719e3769efb23f08b412434ecab777 273 SUPERFAMILY SSF56112 12 243 3.91E-45 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_1477 51719e3769efb23f08b412434ecab777 273 SMART SM00219 24 254 3.8E-4 T 14-10-2018 IPR020635 Tyrosine-protein kinase, catalytic domain GO:0004713|GO:0006468 MC28_1477 51719e3769efb23f08b412434ecab777 273 Pfam PF00069 Protein kinase domain 24 186 2.4E-29 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MC28_1477 51719e3769efb23f08b412434ecab777 273 Gene3D G3DSA:1.10.510.10 15 267 1.0E-39 T 14-10-2018 MC28_2873 2a40988e28eb80f532034d5b4515630e 73 Pfam PF13138 Protein of unknown function (DUF3982) 42 67 1.0E-4 T 14-10-2018 IPR025042 Protein of unknown function DUF3982 MC28_G381 413d766392ad931cc62d9c90e3bce3e5 127 Pfam PF00293 NUDIX domain 6 121 1.9E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_G381 413d766392ad931cc62d9c90e3bce3e5 127 SUPERFAMILY SSF55811 3 127 9.48E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_G381 413d766392ad931cc62d9c90e3bce3e5 127 Gene3D G3DSA:3.90.79.10 1 127 9.5E-34 T 14-10-2018 MC28_5389 294687937ec4a28fb3f03cc18ff83e1b 131 Pfam PF05025 RbsD / FucU transport protein family 1 130 1.1E-48 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 MC28_5389 294687937ec4a28fb3f03cc18ff83e1b 131 Gene3D G3DSA:3.40.1650.10 8 127 7.3E-38 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 MC28_5389 294687937ec4a28fb3f03cc18ff83e1b 131 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 131 32.675 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 MC28_5389 294687937ec4a28fb3f03cc18ff83e1b 131 SUPERFAMILY SSF102546 1 131 1.11E-45 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 MC28_5297 e32fc5d4211a2ba4613070eebb6a4b57 248 Gene3D G3DSA:3.90.70.10 49 248 1.5E-87 T 14-10-2018 MC28_5297 e32fc5d4211a2ba4613070eebb6a4b57 248 PIRSF PIRSF032442 2 245 2.7E-83 T 14-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 MC28_5297 e32fc5d4211a2ba4613070eebb6a4b57 248 Pfam PF13529 Peptidase_C39 like family 56 215 2.8E-44 T 14-10-2018 IPR039564 Peptidase C39-like MC28_3527 33a41a33d61a8ff34f9d67f592317caf 156 PRINTS PR01100 Shikimate kinase family signature 47 55 6.8E-12 T 14-10-2018 MC28_3527 33a41a33d61a8ff34f9d67f592317caf 156 PRINTS PR01100 Shikimate kinase family signature 64 73 6.8E-12 T 14-10-2018 MC28_3527 33a41a33d61a8ff34f9d67f592317caf 156 PRINTS PR01100 Shikimate kinase family signature 19 32 6.8E-12 T 14-10-2018 MC28_3527 33a41a33d61a8ff34f9d67f592317caf 156 PRINTS PR01100 Shikimate kinase family signature 85 102 6.8E-12 T 14-10-2018 MC28_3527 33a41a33d61a8ff34f9d67f592317caf 156 Hamap MF_00109 Shikimate kinase [aroK]. 1 155 20.82 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 MC28_3527 33a41a33d61a8ff34f9d67f592317caf 156 SUPERFAMILY SSF52540 1 151 2.67E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3527 33a41a33d61a8ff34f9d67f592317caf 156 Pfam PF01202 Shikimate kinase 1 154 1.6E-47 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 MC28_3527 33a41a33d61a8ff34f9d67f592317caf 156 Gene3D G3DSA:3.40.50.300 1 156 2.9E-47 T 14-10-2018 MC28_3967 7d73be577b203324f709482510bd6faa 436 SUPERFAMILY SSF53623 87 293 3.66E-58 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_3967 7d73be577b203324f709482510bd6faa 436 SUPERFAMILY SSF53244 294 428 2.2E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_3967 7d73be577b203324f709482510bd6faa 436 Gene3D G3DSA:3.40.1190.10 91 292 3.3E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 MC28_3967 7d73be577b203324f709482510bd6faa 436 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 378 3.3E-18 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 MC28_3967 7d73be577b203324f709482510bd6faa 436 Pfam PF01225 Mur ligase family, catalytic domain 4 101 3.7E-23 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 MC28_3967 7d73be577b203324f709482510bd6faa 436 Gene3D G3DSA:3.40.50.720 3 89 9.2E-21 T 14-10-2018 MC28_3967 7d73be577b203324f709482510bd6faa 436 Gene3D G3DSA:3.90.190.20 293 436 8.7E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 MC28_3967 7d73be577b203324f709482510bd6faa 436 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 433 35.221 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_3967 7d73be577b203324f709482510bd6faa 436 SUPERFAMILY SSF51984 4 88 2.09E-20 T 14-10-2018 MC28_3967 7d73be577b203324f709482510bd6faa 436 Pfam PF08245 Mur ligase middle domain 106 275 3.3E-23 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 MC28_3967 7d73be577b203324f709482510bd6faa 436 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 425 6.4E-135 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 MC28_G295 e18bd07daefe38d0bba65d3ec3ae792c 228 SMART SM00382 33 226 5.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_G295 e18bd07daefe38d0bba65d3ec3ae792c 228 Pfam PF00005 ABC transporter 24 170 2.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_G295 e18bd07daefe38d0bba65d3ec3ae792c 228 Gene3D G3DSA:3.40.50.300 1 227 8.2E-65 T 14-10-2018 MC28_G295 e18bd07daefe38d0bba65d3ec3ae792c 228 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_G295 e18bd07daefe38d0bba65d3ec3ae792c 228 SUPERFAMILY SSF52540 3 221 9.61E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2096 f6c45ad7c214d765476164ed1877e8b5 46 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 46 1.0E-22 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_2096 f6c45ad7c214d765476164ed1877e8b5 46 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 45 3.5E-18 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_F182 46a40d12e1cadd15d250a59e9916eef4 139 Pfam PF13279 Thioesterase-like superfamily 10 130 2.5E-9 T 14-10-2018 MC28_F182 46a40d12e1cadd15d250a59e9916eef4 139 PIRSF PIRSF003230 2 135 1.6E-27 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 MC28_F182 46a40d12e1cadd15d250a59e9916eef4 139 Gene3D G3DSA:3.10.129.10 3 134 7.6E-28 T 14-10-2018 MC28_F182 46a40d12e1cadd15d250a59e9916eef4 139 SUPERFAMILY SSF54637 4 130 4.38E-29 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 Gene3D G3DSA:3.40.1830.10 1 179 7.1E-70 T 14-10-2018 IPR035097 Peptidase M29, N-terminal MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 Pfam PF02073 Thermophilic metalloprotease (M29) 4 407 2.7E-176 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 SUPERFAMILY SSF144052 3 408 8.37E-152 T 14-10-2018 MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 155 177 4.8E-74 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 14 31 4.8E-74 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 362 384 4.8E-74 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 388 407 4.8E-74 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 244 263 4.8E-74 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 300 320 4.8E-74 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 79 98 4.8E-74 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_5044 be2f63c3aa8f6e42a1678fa54aeb4b28 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 323 344 4.8E-74 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_1858 b9338fd96c64c3a4aacc1eb06d6e3a25 268 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 7 268 1.2E-57 T 14-10-2018 IPR003797 DegV MC28_1858 b9338fd96c64c3a4aacc1eb06d6e3a25 268 Gene3D G3DSA:3.30.1180.10 149 268 1.4E-21 T 14-10-2018 MC28_1858 b9338fd96c64c3a4aacc1eb06d6e3a25 268 SUPERFAMILY SSF82549 1 268 4.19E-62 T 14-10-2018 MC28_1858 b9338fd96c64c3a4aacc1eb06d6e3a25 268 Gene3D G3DSA:3.40.50.10170 1 147 1.3E-32 T 14-10-2018 MC28_1858 b9338fd96c64c3a4aacc1eb06d6e3a25 268 Pfam PF02645 Uncharacterised protein, DegV family COG1307 5 268 1.0E-52 T 14-10-2018 IPR003797 DegV MC28_3681 f701bc712395e3b8b38bb74f22553799 315 Pfam PF01594 AI-2E family transporter 3 305 1.2E-67 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like MC28_4617 c4d7c81962f67314172d599b0783f233 74 Pfam PF07293 Protein of unknown function (DUF1450) 7 73 1.5E-10 T 14-10-2018 IPR009910 Protein of unknown function DUF1450 MC28_4617 c4d7c81962f67314172d599b0783f233 74 Hamap MF_01863 UPF0741 protein . 1 74 28.275 T 14-10-2018 IPR020880 Protein of unknown function UPF0741 MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 Pfam PF00563 EAL domain 321 555 2.2E-71 T 14-10-2018 IPR001633 EAL domain MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 Gene3D G3DSA:3.30.70.270 147 317 4.0E-56 T 14-10-2018 MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 SMART SM00267 137 304 2.9E-58 T 14-10-2018 IPR000160 GGDEF domain MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 SUPERFAMILY SSF55073 153 306 2.67E-46 T 14-10-2018 IPR029787 Nucleotide cyclase MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 SUPERFAMILY SSF141868 321 565 7.98E-86 T 14-10-2018 IPR035919 EAL domain superfamily MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 137 3.1E-18 T 14-10-2018 IPR000014 PAS domain MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 SMART SM00086 88 130 3.2E-9 T 14-10-2018 IPR001610 PAC motif MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 SUPERFAMILY SSF55785 28 127 5.06E-30 T 14-10-2018 IPR035965 PAS domain superfamily MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 299 3.2E-42 T 14-10-2018 IPR000160 GGDEF domain MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 Gene3D G3DSA:3.20.20.450 318 568 3.8E-92 T 14-10-2018 IPR035919 EAL domain superfamily MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 SMART SM00052 314 560 4.0E-98 T 14-10-2018 IPR001633 EAL domain MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 Pfam PF13426 PAS domain 28 128 1.7E-16 T 14-10-2018 IPR000014 PAS domain MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 301 3.5E-36 T 14-10-2018 IPR000160 GGDEF domain MC28_5353 c4a722ee393fa30dc9c490853488e8b0 569 Gene3D G3DSA:3.30.450.20 14 146 2.2E-35 T 14-10-2018 MC28_3171 5dc0282d82fc7dbbf03139b8cad1ea43 239 PRINTS PR00127 Clp protease catalytic subunit P signature 47 67 3.4E-10 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_3171 5dc0282d82fc7dbbf03139b8cad1ea43 239 PRINTS PR00127 Clp protease catalytic subunit P signature 156 175 3.4E-10 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_3171 5dc0282d82fc7dbbf03139b8cad1ea43 239 PRINTS PR00127 Clp protease catalytic subunit P signature 97 116 3.4E-10 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_3171 5dc0282d82fc7dbbf03139b8cad1ea43 239 Gene3D G3DSA:3.90.226.10 3 194 5.8E-46 T 14-10-2018 MC28_3171 5dc0282d82fc7dbbf03139b8cad1ea43 239 Pfam PF00574 Clp protease 43 179 3.3E-30 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MC28_3171 5dc0282d82fc7dbbf03139b8cad1ea43 239 SUPERFAMILY SSF52096 5 185 6.52E-45 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_1253 272e52715f314b09a2dbf23c8d699767 180 Gene3D G3DSA:3.40.50.720 1 97 1.9E-7 T 14-10-2018 MC28_1253 272e52715f314b09a2dbf23c8d699767 180 SUPERFAMILY SSF51735 3 83 1.61E-7 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3694 d1365fbed2811537751cf0e9789dd02a 476 SUPERFAMILY SSF52954 382 474 4.68E-25 T 14-10-2018 MC28_3694 d1365fbed2811537751cf0e9789dd02a 476 Pfam PF03129 Anticodon binding domain 384 473 9.0E-17 T 14-10-2018 IPR004154 Anticodon-binding MC28_3694 d1365fbed2811537751cf0e9789dd02a 476 Gene3D G3DSA:3.40.50.800 380 476 1.5E-25 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily MC28_3694 d1365fbed2811537751cf0e9789dd02a 476 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 54 473 33.791 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 MC28_3694 d1365fbed2811537751cf0e9789dd02a 476 Pfam PF13393 Histidyl-tRNA synthetase 61 366 2.0E-44 T 14-10-2018 MC28_3694 d1365fbed2811537751cf0e9789dd02a 476 Gene3D G3DSA:3.30.930.10 54 377 1.7E-114 T 14-10-2018 MC28_3694 d1365fbed2811537751cf0e9789dd02a 476 PIRSF PIRSF001549 52 475 9.5E-122 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 MC28_3694 d1365fbed2811537751cf0e9789dd02a 476 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 57 463 2.1E-154 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 MC28_3694 d1365fbed2811537751cf0e9789dd02a 476 SUPERFAMILY SSF55681 56 371 1.32E-95 T 14-10-2018 MC28_2363 a62455de9868a707f238d0ed52d89541 331 Gene3D G3DSA:3.40.50.1100 48 156 2.7E-109 T 14-10-2018 MC28_2363 a62455de9868a707f238d0ed52d89541 331 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 14 326 1.8E-97 T 14-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 MC28_2363 a62455de9868a707f238d0ed52d89541 331 PIRSF PIRSF006278 1 331 6.1E-92 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase MC28_2363 a62455de9868a707f238d0ed52d89541 331 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 13 318 1.2E-55 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_2363 a62455de9868a707f238d0ed52d89541 331 Gene3D G3DSA:3.40.50.1100 16 324 2.7E-109 T 14-10-2018 MC28_2363 a62455de9868a707f238d0ed52d89541 331 SUPERFAMILY SSF53686 4 325 3.02E-89 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_C017 ebbe42889d2bf1022a0599b3469b0967 308 Gene3D G3DSA:1.10.443.10 106 308 4.1E-18 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_C017 ebbe42889d2bf1022a0599b3469b0967 308 SUPERFAMILY SSF56349 112 304 1.03E-17 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_C017 ebbe42889d2bf1022a0599b3469b0967 308 Pfam PF00589 Phage integrase family 143 302 4.6E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_C017 ebbe42889d2bf1022a0599b3469b0967 308 Gene3D G3DSA:1.10.150.130 5 101 4.6E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_4759 c4e6c2294b1c7b46e0ca05d34d3ab32f 52 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 3 47 2.6E-7 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 MC28_4759 c4e6c2294b1c7b46e0ca05d34d3ab32f 52 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 6 15 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 MC28_0224 6095377ff863bb8c9c09ac302914f008 224 Gene3D G3DSA:3.40.50.2300 1 123 8.5E-40 T 14-10-2018 MC28_0224 6095377ff863bb8c9c09ac302914f008 224 SMART SM00448 1 112 2.0E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0224 6095377ff863bb8c9c09ac302914f008 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 5.8E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_0224 6095377ff863bb8c9c09ac302914f008 224 Pfam PF00072 Response regulator receiver domain 3 113 8.4E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0224 6095377ff863bb8c9c09ac302914f008 224 Gene3D G3DSA:1.10.10.10 124 224 2.5E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0224 6095377ff863bb8c9c09ac302914f008 224 SMART SM00862 145 220 1.2E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_0224 6095377ff863bb8c9c09ac302914f008 224 SUPERFAMILY SSF52172 1 178 5.28E-41 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4239 684b11888913154b7567367860f1fdd2 327 SUPERFAMILY SSF51261 112 314 2.35E-37 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_4239 684b11888913154b7567367860f1fdd2 327 Gene3D G3DSA:2.70.70.10 114 326 1.3E-56 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_4239 684b11888913154b7567367860f1fdd2 327 Pfam PF01551 Peptidase family M23 203 301 2.0E-19 T 14-10-2018 IPR016047 Peptidase M23 MC28_0689 9a4569115a35dc918102eed7cdf4d972 206 SUPERFAMILY SSF109755 7 197 3.66E-6 T 14-10-2018 MC28_0689 9a4569115a35dc918102eed7cdf4d972 206 Pfam PF01865 Protein of unknown function DUF47 5 203 6.9E-27 T 14-10-2018 IPR018445 Putative phosphate transport regulator MC28_0689 9a4569115a35dc918102eed7cdf4d972 206 Gene3D G3DSA:1.20.58.220 10 206 2.0E-57 T 14-10-2018 IPR038078 PhoU-like domain superfamily MC28_0902 5f2bad19ace512278574ef2d33b32745 302 SMART SM00260 13 149 1.1E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 MC28_0902 5f2bad19ace512278574ef2d33b32745 302 Gene3D G3DSA:3.40.50.2300 169 302 3.2E-23 T 14-10-2018 MC28_0902 5f2bad19ace512278574ef2d33b32745 302 SUPERFAMILY SSF50341 7 150 1.7E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 MC28_0902 5f2bad19ace512278574ef2d33b32745 302 Gene3D G3DSA:2.30.30.40 19 143 2.9E-34 T 14-10-2018 MC28_0902 5f2bad19ace512278574ef2d33b32745 302 PIRSF PIRSF002867 1 302 1.3E-94 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV MC28_0902 5f2bad19ace512278574ef2d33b32745 302 Gene3D G3DSA:2.40.50.180 34 149 2.9E-34 T 14-10-2018 MC28_0902 5f2bad19ace512278574ef2d33b32745 302 SMART SM00448 174 297 1.0E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0902 5f2bad19ace512278574ef2d33b32745 302 SUPERFAMILY SSF52172 173 300 3.98E-23 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0902 5f2bad19ace512278574ef2d33b32745 302 Pfam PF00072 Response regulator receiver domain 176 296 1.3E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0902 5f2bad19ace512278574ef2d33b32745 302 Pfam PF01584 CheW-like domain 18 149 2.9E-36 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 MC28_4058 099283f3e888ad6ccb1f19f24900f472 107 Gene3D G3DSA:2.60.300.12 1 102 1.9E-6 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 MC28_4058 099283f3e888ad6ccb1f19f24900f472 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.3E-23 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 MC28_4058 099283f3e888ad6ccb1f19f24900f472 107 SUPERFAMILY SSF89360 1 104 1.02E-24 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 MC28_2319 a17ee5744446a006951183a69a70bcda 387 Gene3D G3DSA:3.30.300.210 223 375 7.1E-39 T 14-10-2018 IPR038501 Spore germination GerAC superfamily MC28_2319 a17ee5744446a006951183a69a70bcda 387 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 1 374 7.5E-85 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_2319 a17ee5744446a006951183a69a70bcda 387 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 207 372 1.7E-35 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 MC28_0112 92d8ee76c7a7eb4e6b9efe8e5d5cb627 121 Pfam PF00893 Small Multidrug Resistance protein 8 96 3.1E-15 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 MC28_0112 92d8ee76c7a7eb4e6b9efe8e5d5cb627 121 Gene3D G3DSA:1.10.3730.20 6 111 7.6E-19 T 14-10-2018 MC28_0112 92d8ee76c7a7eb4e6b9efe8e5d5cb627 121 SUPERFAMILY SSF103481 11 108 2.35E-12 T 14-10-2018 MC28_0082 ecbf72644da9508a98a673211e431155 63 ProDom PD059966 COTJA SPORE PROTEIN-RELATED COAT-ASSOCIATED COTJAA JA 1 63 2.0E-29 T 14-10-2018 IPR020256 Spore coat protein CotJA MC28_0082 ecbf72644da9508a98a673211e431155 63 Pfam PF11007 Spore coat associated protein JA (CotJA) 20 55 2.3E-9 T 14-10-2018 IPR020256 Spore coat protein CotJA MC28_3602 c0f44b95e9009e447481771812b82af2 249 PIRSF PIRSF015601 1 248 3.5E-62 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 MC28_3602 c0f44b95e9009e447481771812b82af2 249 Pfam PF04452 RNA methyltransferase 17 243 1.7E-72 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 MC28_3602 c0f44b95e9009e447481771812b82af2 249 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 5 248 1.8E-69 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 MC28_3602 c0f44b95e9009e447481771812b82af2 249 SUPERFAMILY SSF75217 72 248 4.8E-56 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases MC28_3602 c0f44b95e9009e447481771812b82af2 249 Gene3D G3DSA:2.40.240.20 1 69 2.0E-19 T 14-10-2018 MC28_3602 c0f44b95e9009e447481771812b82af2 249 SUPERFAMILY SSF88697 1 68 1.12E-11 T 14-10-2018 IPR015947 PUA-like superfamily MC28_3602 c0f44b95e9009e447481771812b82af2 249 Gene3D G3DSA:3.40.1280.10 71 249 3.6E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MC28_1226 3a4c887c5212b5ca8be3e0172e1d19dd 311 PRINTS PR00069 Aldo-keto reductase signature 44 68 8.9E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_1226 3a4c887c5212b5ca8be3e0172e1d19dd 311 PRINTS PR00069 Aldo-keto reductase signature 109 127 8.9E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_1226 3a4c887c5212b5ca8be3e0172e1d19dd 311 PRINTS PR00069 Aldo-keto reductase signature 140 157 8.9E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_1226 3a4c887c5212b5ca8be3e0172e1d19dd 311 PRINTS PR00069 Aldo-keto reductase signature 174 203 8.9E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 MC28_1226 3a4c887c5212b5ca8be3e0172e1d19dd 311 SUPERFAMILY SSF51430 1 308 9.82E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_1226 3a4c887c5212b5ca8be3e0172e1d19dd 311 Gene3D G3DSA:3.20.20.100 1 311 6.1E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_1226 3a4c887c5212b5ca8be3e0172e1d19dd 311 Pfam PF00248 Aldo/keto reductase family 15 308 2.2E-75 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_2506 9f1974945926b7675710d71f101e4e2f 294 Pfam PF00892 EamA-like transporter family 154 290 4.1E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_2506 9f1974945926b7675710d71f101e4e2f 294 Pfam PF00892 EamA-like transporter family 6 143 4.2E-26 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_2506 9f1974945926b7675710d71f101e4e2f 294 SUPERFAMILY SSF103481 40 145 4.58E-15 T 14-10-2018 MC28_2506 9f1974945926b7675710d71f101e4e2f 294 SUPERFAMILY SSF103481 190 291 3.4E-14 T 14-10-2018 MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 SUPERFAMILY SSF55604 6 78 1.57E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 Gene3D G3DSA:3.30.1360.60 1 77 1.4E-29 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 627 1.1E-227 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 483 607 6.7E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 Gene3D G3DSA:2.70.70.10 471 626 1.1E-53 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 SUPERFAMILY SSF51261 477 626 2.79E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 546 558 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 Pfam PF00367 phosphotransferase system, EIIB 8 41 3.1E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 484 604 1.5E-43 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 MC28_0202 62c5df0b9e27feda690a2175fcae7daa 630 Pfam PF02378 Phosphotransferase system, EIIC 103 397 3.6E-32 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_0854 866ab76a1340540eac1ed17feaea518e 516 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 416 436 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site MC28_0854 866ab76a1340540eac1ed17feaea518e 516 Pfam PF00474 Sodium:solute symporter family 33 434 3.2E-125 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 MC28_0854 866ab76a1340540eac1ed17feaea518e 516 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 148 173 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site MC28_0854 866ab76a1340540eac1ed17feaea518e 516 Gene3D G3DSA:1.20.1730.10 20 475 6.7E-68 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily MC28_0854 866ab76a1340540eac1ed17feaea518e 516 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 434 1.3E-91 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 MC28_0972 92f91c419f9c8cad55e452eeedff0460 237 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 13 216 2.0E-54 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 MC28_4464 d324290ba119991aedddcff78802692b 163 Pfam PF09988 Uncharacterized metal-binding protein (DUF2227) 2 154 3.5E-43 T 14-10-2018 IPR019250 Protein of unknown function DUF2227, metal-binding MC28_4355 5b01847cda8910fb5e82aceed215045d 231 SUPERFAMILY SSF52540 2 207 1.2E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4355 5b01847cda8910fb5e82aceed215045d 231 Pfam PF00005 ABC transporter 4 145 8.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4355 5b01847cda8910fb5e82aceed215045d 231 Gene3D G3DSA:3.40.50.300 1 224 3.2E-56 T 14-10-2018 MC28_4355 5b01847cda8910fb5e82aceed215045d 231 SMART SM00382 7 194 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1981 d8a81c87bbdf703833c9b49513734373 221 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 217 1.1E-69 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 MC28_1981 d8a81c87bbdf703833c9b49513734373 221 SUPERFAMILY SSF75445 126 204 1.23E-23 T 14-10-2018 MC28_1981 d8a81c87bbdf703833c9b49513734373 221 Gene3D G3DSA:3.40.50.1360 5 212 8.2E-82 T 14-10-2018 MC28_1981 d8a81c87bbdf703833c9b49513734373 221 Gene3D G3DSA:3.30.70.260 120 192 8.2E-82 T 14-10-2018 MC28_1981 d8a81c87bbdf703833c9b49513734373 221 SUPERFAMILY SSF100950 2 144 1.52E-45 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_1981 d8a81c87bbdf703833c9b49513734373 221 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 221 33.559 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 MC28_1981 d8a81c87bbdf703833c9b49513734373 221 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 218 2.7E-89 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 MC28_G105 8111fa3ca1cfaf713cf462af9bceff2d 166 Gene3D G3DSA:3.40.630.30 9 164 9.0E-40 T 14-10-2018 MC28_G105 8111fa3ca1cfaf713cf462af9bceff2d 166 Pfam PF00583 Acetyltransferase (GNAT) family 40 152 1.1E-17 T 14-10-2018 IPR000182 GNAT domain MC28_G105 8111fa3ca1cfaf713cf462af9bceff2d 166 SUPERFAMILY SSF55729 8 162 2.06E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3978 d5541abdb8aedcb2969e03fecdc9df83 284 SMART SM00849 50 257 4.3E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3978 d5541abdb8aedcb2969e03fecdc9df83 284 SUPERFAMILY SSF56281 3 263 2.36E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3978 d5541abdb8aedcb2969e03fecdc9df83 284 Pfam PF00753 Metallo-beta-lactamase superfamily 55 233 1.0E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3978 d5541abdb8aedcb2969e03fecdc9df83 284 Gene3D G3DSA:3.60.15.10 4 269 5.4E-87 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_D027 b70ba5d88c8ad67a7d4dc3cebb4aed9c 199 Pfam PF00877 NlpC/P60 family 141 178 1.4E-9 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_D027 b70ba5d88c8ad67a7d4dc3cebb4aed9c 199 Gene3D G3DSA:1.10.530.10 1 112 5.8E-23 T 14-10-2018 MC28_D027 b70ba5d88c8ad67a7d4dc3cebb4aed9c 199 SUPERFAMILY SSF54001 122 175 1.96E-13 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_D027 b70ba5d88c8ad67a7d4dc3cebb4aed9c 199 Gene3D G3DSA:3.90.1720.10 113 189 4.7E-16 T 14-10-2018 MC28_D027 b70ba5d88c8ad67a7d4dc3cebb4aed9c 199 Pfam PF13702 Lysozyme-like 1 113 2.4E-30 T 14-10-2018 MC28_4193 e2921934805ffe7c27f9b0c374262d79 168 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_4193 e2921934805ffe7c27f9b0c374262d79 168 SUPERFAMILY SSF55811 6 131 8.39E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_4193 e2921934805ffe7c27f9b0c374262d79 168 PRINTS PR00502 NUDIX hydrolase family signature 36 50 2.7E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_4193 e2921934805ffe7c27f9b0c374262d79 168 PRINTS PR00502 NUDIX hydrolase family signature 50 65 2.7E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_4193 e2921934805ffe7c27f9b0c374262d79 168 Pfam PF00293 NUDIX domain 9 118 7.5E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_4193 e2921934805ffe7c27f9b0c374262d79 168 Gene3D G3DSA:3.90.79.10 9 148 7.0E-25 T 14-10-2018 MC28_0816 4161a07e7b2ef858160673e5e157a66a 157 SUPERFAMILY SSF55729 1 150 1.05E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_0816 4161a07e7b2ef858160673e5e157a66a 157 Gene3D G3DSA:3.40.630.30 2 152 2.7E-22 T 14-10-2018 MC28_0816 4161a07e7b2ef858160673e5e157a66a 157 Pfam PF00583 Acetyltransferase (GNAT) family 34 130 2.0E-12 T 14-10-2018 IPR000182 GNAT domain MC28_0590 68a4b5efb920465a855d8703158d1a66 497 Pfam PF00171 Aldehyde dehydrogenase family 12 476 3.4E-177 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_0590 68a4b5efb920465a855d8703158d1a66 497 SUPERFAMILY SSF53720 3 479 7.33E-170 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_0590 68a4b5efb920465a855d8703158d1a66 497 Gene3D G3DSA:3.40.309.10 253 446 2.3E-183 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_0590 68a4b5efb920465a855d8703158d1a66 497 Gene3D G3DSA:3.40.605.10 11 470 2.3E-183 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_0590 68a4b5efb920465a855d8703158d1a66 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 MC28_4742 36b4241f1fbbb5473efdf1a05da13c86 89 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 12 84 2.2E-20 T 14-10-2018 IPR010001 SigmaK-factor processing regulatory BofA MC28_4742 36b4241f1fbbb5473efdf1a05da13c86 89 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 5 86 7.0E-29 T 14-10-2018 IPR010001 SigmaK-factor processing regulatory BofA MC28_2660 3bef6d328d5c197b557ddb2f3e40d87f 175 Gene3D G3DSA:3.30.460.10 2 175 2.9E-50 T 14-10-2018 MC28_2660 3bef6d328d5c197b557ddb2f3e40d87f 175 Pfam PF04229 GrpB protein 5 171 4.6E-46 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase MC28_2660 3bef6d328d5c197b557ddb2f3e40d87f 175 SUPERFAMILY SSF81301 7 173 1.41E-43 T 14-10-2018 MC28_3927 6cf875bc2b893e36c04fe9aa10af9248 551 Pfam PF06160 Septation ring formation regulator, EzrA 2 542 1.7E-168 T 14-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 MC28_3927 6cf875bc2b893e36c04fe9aa10af9248 551 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 2 547 20.772 T 14-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 MC28_2684 cd09e1e1a31fb1bde11a6c4dd6014f0a 121 Gene3D G3DSA:1.20.5.340 66 113 3.3E-5 T 14-10-2018 MC28_1394 2e56c73b1b69e65c757e8e51a740a72b 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 2.3E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1394 2e56c73b1b69e65c757e8e51a740a72b 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 2.3E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1394 2e56c73b1b69e65c757e8e51a740a72b 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 2.3E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1394 2e56c73b1b69e65c757e8e51a740a72b 446 Pfam PF00209 Sodium:neurotransmitter symporter family 136 441 5.2E-30 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1394 2e56c73b1b69e65c757e8e51a740a72b 446 Pfam PF00209 Sodium:neurotransmitter symporter family 5 122 5.4E-25 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1394 2e56c73b1b69e65c757e8e51a740a72b 446 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 28 42 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1394 2e56c73b1b69e65c757e8e51a740a72b 446 SUPERFAMILY SSF161070 5 443 4.84E-132 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 MC28_2713 31db1dd008f4179a685df0882728efc5 78 Gene3D G3DSA:3.10.20.30 1 78 4.2E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_2713 31db1dd008f4179a685df0882728efc5 78 Pfam PF02597 ThiS family 4 78 2.9E-17 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 MC28_2713 31db1dd008f4179a685df0882728efc5 78 SUPERFAMILY SSF54285 1 78 3.78E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MC28_2713 31db1dd008f4179a685df0882728efc5 78 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 78 3.9E-22 T 14-10-2018 MC28_3305 4a2c559702b5793da11f7554195c6e29 573 Gene3D G3DSA:3.20.20.80 19 487 3.3E-219 T 14-10-2018 MC28_3305 4a2c559702b5793da11f7554195c6e29 573 Pfam PF00128 Alpha amylase, catalytic domain 43 391 2.5E-134 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_3305 4a2c559702b5793da11f7554195c6e29 573 SUPERFAMILY SSF51445 18 490 1.85E-162 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_3305 4a2c559702b5793da11f7554195c6e29 573 SMART SM00642 28 434 9.3E-171 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MC28_3305 4a2c559702b5793da11f7554195c6e29 573 Gene3D G3DSA:3.90.400.10 120 189 3.3E-219 T 14-10-2018 MC28_3305 4a2c559702b5793da11f7554195c6e29 573 Gene3D G3DSA:2.60.40.1180 496 573 8.8E-26 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta MC28_3305 4a2c559702b5793da11f7554195c6e29 573 SUPERFAMILY SSF51011 495 572 3.5E-22 T 14-10-2018 MC28_3305 4a2c559702b5793da11f7554195c6e29 573 Pfam PF16657 Maltogenic Amylase, C-terminal domain 495 568 6.6E-9 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal MC28_2536 26dc8e98b2db8bcfa9cb53ceca3c851b 83 Pfam PF01047 MarR family 2 32 3.6E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_2536 26dc8e98b2db8bcfa9cb53ceca3c851b 83 Gene3D G3DSA:1.10.10.10 1 83 8.2E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2536 26dc8e98b2db8bcfa9cb53ceca3c851b 83 SUPERFAMILY SSF46785 2 79 7.66E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3396 eccd22d2014a714f95263d6541166359 439 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 5.7E-5 T 14-10-2018 MC28_3396 eccd22d2014a714f95263d6541166359 439 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 5.7E-5 T 14-10-2018 MC28_3396 eccd22d2014a714f95263d6541166359 439 Pfam PF13726 Na+-H+ antiporter family 2 88 1.3E-33 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal MC28_3396 eccd22d2014a714f95263d6541166359 439 Pfam PF03553 Na+/H+ antiporter family 151 433 2.8E-68 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 MC28_G075 a6a96aac14f9258afac2652f8e7714b2 291 SUPERFAMILY SSF51735 3 259 1.83E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_G075 a6a96aac14f9258afac2652f8e7714b2 291 Pfam PF05368 NmrA-like family 3 222 4.5E-26 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 MC28_G075 a6a96aac14f9258afac2652f8e7714b2 291 Gene3D G3DSA:3.40.50.720 5 270 1.9E-63 T 14-10-2018 MC28_G075 a6a96aac14f9258afac2652f8e7714b2 291 Gene3D G3DSA:3.90.25.10 140 271 1.9E-63 T 14-10-2018 MC28_3167 e79c4ec4ae6e990ae63097b3dbb28921 115 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 5 109 3.2E-16 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor MC28_3167 e79c4ec4ae6e990ae63097b3dbb28921 115 Gene3D G3DSA:2.40.10.270 1 111 2.8E-23 T 14-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily MC28_3167 e79c4ec4ae6e990ae63097b3dbb28921 115 Pfam PF05521 Phage head-tail joining protein 7 107 4.7E-22 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor MC28_2816 629856f67691ce30d027770670c78bb9 162 Gene3D G3DSA:3.90.79.10 28 161 1.3E-25 T 14-10-2018 MC28_2816 629856f67691ce30d027770670c78bb9 162 ProSitePatterns PS00893 Nudix box signature. 67 88 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_2816 629856f67691ce30d027770670c78bb9 162 Pfam PF00293 NUDIX domain 36 157 3.8E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_2816 629856f67691ce30d027770670c78bb9 162 PRINTS PR00502 NUDIX hydrolase family signature 62 76 1.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_2816 629856f67691ce30d027770670c78bb9 162 PRINTS PR00502 NUDIX hydrolase family signature 76 91 1.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_2816 629856f67691ce30d027770670c78bb9 162 SUPERFAMILY SSF55811 35 161 4.74E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 166 275 2.5E-24 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 22 1.8E-26 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 155 183 1.8E-26 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 230 257 1.8E-26 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 58 87 1.8E-26 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 234 246 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 Gene3D G3DSA:3.40.50.720 1 165 6.4E-52 T 14-10-2018 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 152 1.6E-44 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 Gene3D G3DSA:1.10.1040.10 166 296 1.0E-49 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 SUPERFAMILY SSF51735 1 152 2.12E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 297 3.6E-148 T 14-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 SUPERFAMILY SSF48179 164 296 2.79E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_2513 47d4d89f0cb006486ce1df69bf523414 297 SMART SM01350 166 297 2.9E-6 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 MC28_0584 f775e88b4eab479b55257be9d1b1e9d9 322 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 1 320 4.9E-143 T 14-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MC28_0584 f775e88b4eab479b55257be9d1b1e9d9 322 Pfam PF00268 Ribonucleotide reductase, small chain 4 281 1.9E-79 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 MC28_0584 f775e88b4eab479b55257be9d1b1e9d9 322 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 92 108 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 MC28_0584 f775e88b4eab479b55257be9d1b1e9d9 322 Gene3D G3DSA:1.10.620.20 1 290 2.0E-111 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 MC28_0584 f775e88b4eab479b55257be9d1b1e9d9 322 PIRSF PIRSF000355 1 316 1.6E-83 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 MC28_0584 f775e88b4eab479b55257be9d1b1e9d9 322 SUPERFAMILY SSF47240 2 319 4.87E-91 T 14-10-2018 IPR009078 Ferritin-like superfamily MC28_1099 cb34b190887a57be578f67351f17f351 106 Pfam PF10782 Zinc-finger 10 47 3.4E-5 T 14-10-2018 IPR019718 Protein of unknown function DUF2602 MC28_1099 cb34b190887a57be578f67351f17f351 106 Gene3D G3DSA:1.10.10.60 62 104 2.1E-5 T 14-10-2018 MC28_3152 11c62222bab7b450fa5f286df7592bc4 264 Gene3D G3DSA:3.30.70.2030 188 264 2.0E-22 T 14-10-2018 MC28_3152 11c62222bab7b450fa5f286df7592bc4 264 SUPERFAMILY SSF51445 3 187 3.11E-45 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_3152 11c62222bab7b450fa5f286df7592bc4 264 Pfam PF01183 Glycosyl hydrolases family 25 5 168 5.7E-26 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 MC28_3152 11c62222bab7b450fa5f286df7592bc4 264 Pfam PF12123 N-acetylmuramoyl-l-alanine amidase 221 262 1.2E-20 T 14-10-2018 IPR021976 N-acetylmuramoyl-l-alanine amidase MetaCyc: PWY-7883 MC28_3152 11c62222bab7b450fa5f286df7592bc4 264 Gene3D G3DSA:3.20.20.80 2 187 2.3E-73 T 14-10-2018 MC28_1501 4deff4c3474a30c23b8566b90e27f1c5 232 Pfam PF01695 IstB-like ATP binding protein 98 195 6.9E-13 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 MC28_1501 4deff4c3474a30c23b8566b90e27f1c5 232 Gene3D G3DSA:3.40.50.300 10 218 1.3E-34 T 14-10-2018 MC28_1501 4deff4c3474a30c23b8566b90e27f1c5 232 SUPERFAMILY SSF52540 97 204 1.98E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G322 f1c87125048d4c0e5172643efdd2e1f9 56 Gene3D G3DSA:3.10.105.10 1 49 1.1E-10 T 14-10-2018 MC28_G322 f1c87125048d4c0e5172643efdd2e1f9 56 SUPERFAMILY SSF53850 2 41 2.35E-6 T 14-10-2018 MC28_4249 f8f857c54f283c28611fd792b977830f 270 PIRSF PIRSF002854 1 270 6.1E-100 T 14-10-2018 IPR004872 Lipoprotein NlpA family MC28_4249 f8f857c54f283c28611fd792b977830f 270 Gene3D G3DSA:3.40.190.10 111 219 4.3E-95 T 14-10-2018 MC28_4249 f8f857c54f283c28611fd792b977830f 270 SUPERFAMILY SSF53850 29 269 7.76E-78 T 14-10-2018 MC28_4249 f8f857c54f283c28611fd792b977830f 270 Pfam PF03180 NLPA lipoprotein 30 268 1.6E-85 T 14-10-2018 IPR004872 Lipoprotein NlpA family MC28_4249 f8f857c54f283c28611fd792b977830f 270 Gene3D G3DSA:3.40.190.10 32 266 4.3E-95 T 14-10-2018 MC28_4438 622531a24834a34577038609700b4bc6 137 SMART SM00754 3 134 3.0E-33 T 14-10-2018 IPR010895 CHRD MC28_4438 622531a24834a34577038609700b4bc6 137 Pfam PF07452 CHRD domain 5 132 6.7E-22 T 14-10-2018 IPR010895 CHRD MC28_3789 878df7d59d27b0095e326d5abcdb0966 275 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 8 272 1.7E-93 T 14-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 MC28_3789 878df7d59d27b0095e326d5abcdb0966 275 SUPERFAMILY SSF56784 58 250 9.9E-45 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3789 878df7d59d27b0095e326d5abcdb0966 275 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 19 245 6.1E-49 T 14-10-2018 IPR005519 Acid phosphatase, class B-like MC28_3789 878df7d59d27b0095e326d5abcdb0966 275 PIRSF PIRSF019271 1 275 3.5E-109 T 14-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 MC28_3789 878df7d59d27b0095e326d5abcdb0966 275 Gene3D G3DSA:3.40.50.1000 24 275 2.5E-95 T 14-10-2018 IPR023214 HAD superfamily MC28_2647 d62f434dc17b8c2218e5040e2ef4adc9 410 SUPERFAMILY SSF103473 16 405 1.57E-58 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2647 d62f434dc17b8c2218e5040e2ef4adc9 410 Pfam PF07690 Major Facilitator Superfamily 33 337 5.5E-32 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2647 d62f434dc17b8c2218e5040e2ef4adc9 410 Gene3D G3DSA:1.20.1250.20 13 205 3.5E-30 T 14-10-2018 MC28_2647 d62f434dc17b8c2218e5040e2ef4adc9 410 Gene3D G3DSA:1.20.1250.20 216 410 2.0E-21 T 14-10-2018 MC28_3218 89316df47e6b6aeeb0b1e437a842d65b 150 Gene3D G3DSA:1.20.1500.10 5 127 2.1E-29 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily MC28_3218 89316df47e6b6aeeb0b1e437a842d65b 150 SUPERFAMILY SSF158622 6 127 1.96E-33 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily MC28_3218 89316df47e6b6aeeb0b1e437a842d65b 150 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 11 116 5.1E-22 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA MC28_4067 739a163de6b01d05722d75d20be6f65d 98 Pfam PF13143 Protein of unknown function (DUF3986) 3 89 1.7E-32 T 14-10-2018 IPR025047 Protein of unknown function DUF3986 MC28_2393 4e53b91ed38b65e42520f69098813f89 355 SUPERFAMILY SSF51445 44 329 6.78E-15 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_2393 4e53b91ed38b65e42520f69098813f89 355 Gene3D G3DSA:3.20.20.80 31 355 2.6E-43 T 14-10-2018 MC28_4476 9b49390baae0867e689253bcbd8f20d4 127 Pfam PF13049 Protein of unknown function (DUF3910) 28 120 3.0E-58 T 14-10-2018 IPR025021 Protein of unknown function DUF3910 MC28_3729 65744acbada49d22712af89e1ef9ff23 258 SUPERFAMILY SSF52540 3 225 2.51E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3729 65744acbada49d22712af89e1ef9ff23 258 Gene3D G3DSA:3.40.50.300 1 252 3.7E-66 T 14-10-2018 MC28_3729 65744acbada49d22712af89e1ef9ff23 258 SMART SM00382 33 221 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3729 65744acbada49d22712af89e1ef9ff23 258 Pfam PF00005 ABC transporter 24 172 3.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_2315 aae4a021b88ec6f261b2059a0bde2202 868 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 24 854 1.0E-269 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 MC28_2315 aae4a021b88ec6f261b2059a0bde2202 868 Hamap MF_01871 UPF0753 protein . 19 868 24.351 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 MC28_1019 b57f5b348e257d2107c85becd6d1aff1 170 Gene3D G3DSA:3.40.630.30 9 149 1.2E-23 T 14-10-2018 MC28_1019 b57f5b348e257d2107c85becd6d1aff1 170 Pfam PF13302 Acetyltransferase (GNAT) domain 38 147 2.7E-11 T 14-10-2018 IPR000182 GNAT domain MC28_1019 b57f5b348e257d2107c85becd6d1aff1 170 SUPERFAMILY SSF55729 5 154 9.9E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_F033 40acfc2f15c499ae3e5d2b9b3c926c47 138 Pfam PF01381 Helix-turn-helix 23 75 1.7E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F033 40acfc2f15c499ae3e5d2b9b3c926c47 138 Gene3D G3DSA:1.10.260.40 9 80 1.8E-20 T 14-10-2018 MC28_F033 40acfc2f15c499ae3e5d2b9b3c926c47 138 SMART SM00530 22 77 5.4E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F033 40acfc2f15c499ae3e5d2b9b3c926c47 138 SUPERFAMILY SSF47413 12 82 3.22E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_4074 d86bada003fe0e55377abe40363cb472 179 Pfam PF11667 Putative zincin peptidase 58 163 2.0E-20 T 14-10-2018 IPR021683 Putative zincin peptidase MC28_3816 eff0905093a25e005587e0d63eaac3f0 307 Pfam PF00005 ABC transporter 21 161 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3816 eff0905093a25e005587e0d63eaac3f0 307 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_3816 eff0905093a25e005587e0d63eaac3f0 307 SUPERFAMILY SSF52540 3 222 2.15E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3816 eff0905093a25e005587e0d63eaac3f0 307 SMART SM00382 29 210 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3816 eff0905093a25e005587e0d63eaac3f0 307 Gene3D G3DSA:3.40.50.300 1 238 7.2E-56 T 14-10-2018 MC28_2248 4531ef180184f41269340c9186fb1670 318 Gene3D G3DSA:3.90.1200.10 106 312 9.5E-23 T 14-10-2018 MC28_2248 4531ef180184f41269340c9186fb1670 318 SUPERFAMILY SSF56112 9 265 3.68E-36 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_2248 4531ef180184f41269340c9186fb1670 318 Pfam PF01636 Phosphotransferase enzyme family 37 252 9.7E-28 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_F113 f122ed18cc82d62578ad576104a8ab76 132 Gene3D G3DSA:3.40.50.510 1 130 1.1E-41 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 MC28_F113 f122ed18cc82d62578ad576104a8ab76 132 Pfam PF03610 PTS system fructose IIA component 6 119 1.4E-24 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 MC28_F113 f122ed18cc82d62578ad576104a8ab76 132 SUPERFAMILY SSF53062 4 129 3.66E-33 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 MC28_F113 f122ed18cc82d62578ad576104a8ab76 132 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 5 126 1.5E-39 T 14-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain MC28_4782 82033223e070e0551dea810611e2cc57 313 TIGRFAM TIGR01136 cysKM: cysteine synthase 14 309 3.0E-138 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 MC28_4782 82033223e070e0551dea810611e2cc57 313 Gene3D G3DSA:3.40.50.1100 51 149 4.0E-127 T 14-10-2018 MC28_4782 82033223e070e0551dea810611e2cc57 313 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 14 297 5.3E-72 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_4782 82033223e070e0551dea810611e2cc57 313 TIGRFAM TIGR01139 cysK: cysteine synthase A 14 309 7.4E-148 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 MC28_4782 82033223e070e0551dea810611e2cc57 313 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 39 57 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 MC28_4782 82033223e070e0551dea810611e2cc57 313 SUPERFAMILY SSF53686 7 310 4.32E-106 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_4782 82033223e070e0551dea810611e2cc57 313 Gene3D G3DSA:3.40.50.1100 12 305 4.0E-127 T 14-10-2018 MC28_1021 66bc25d3aa1a04d96b2ddda7af635604 544 Pfam PF01943 Polysaccharide biosynthesis protein 6 321 8.6E-44 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 MC28_1021 66bc25d3aa1a04d96b2ddda7af635604 544 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 377 523 4.3E-24 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain MC28_1021 66bc25d3aa1a04d96b2ddda7af635604 544 PIRSF PIRSF038958 1 541 2.6E-109 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type MC28_3780 9d2e82d98563c222be3cb434dc21bd25 431 Pfam PF00860 Permease family 13 394 8.3E-61 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 MC28_2183 ed54f9bbed65ca605cadd27d77c08449 249 SUPERFAMILY SSF46785 2 77 4.28E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2183 ed54f9bbed65ca605cadd27d77c08449 249 Gene3D G3DSA:1.10.10.10 1 77 2.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2183 ed54f9bbed65ca605cadd27d77c08449 249 Pfam PF01614 Bacterial transcriptional regulator 123 240 6.9E-20 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal MC28_2183 ed54f9bbed65ca605cadd27d77c08449 249 SMART SM00346 2 94 1.4E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 MC28_2183 ed54f9bbed65ca605cadd27d77c08449 249 Pfam PF09339 IclR helix-turn-helix domain 4 55 3.8E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 MC28_2183 ed54f9bbed65ca605cadd27d77c08449 249 Gene3D G3DSA:3.30.450.40 78 247 8.0E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_2183 ed54f9bbed65ca605cadd27d77c08449 249 SUPERFAMILY SSF55781 70 244 4.38E-35 T 14-10-2018 MC28_F108 9c7cf222a42337fbf4ffaebc91eeac12 120 SUPERFAMILY SSF55594 4 89 6.67E-5 T 14-10-2018 IPR035895 HPr-like superfamily MC28_F108 9c7cf222a42337fbf4ffaebc91eeac12 120 Gene3D G3DSA:3.30.1340.10 1 92 7.3E-8 T 14-10-2018 IPR035895 HPr-like superfamily MC28_F108 9c7cf222a42337fbf4ffaebc91eeac12 120 Pfam PF00381 PTS HPr component phosphorylation site 4 88 7.3E-7 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_D118 2b188a4d5bfc8ca7ee1a60ce2fe4f6c2 877 Gene3D G3DSA:3.40.50.300 532 736 9.6E-24 T 14-10-2018 MC28_D118 2b188a4d5bfc8ca7ee1a60ce2fe4f6c2 877 SUPERFAMILY SSF52540 175 714 7.43E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_D118 2b188a4d5bfc8ca7ee1a60ce2fe4f6c2 877 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 183 413 2.5E-19 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 MC28_D118 2b188a4d5bfc8ca7ee1a60ce2fe4f6c2 877 Pfam PF12696 TraM recognition site of TraD and TraG 589 704 1.0E-23 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site MC28_F161 19e445005937c70d749ed8c3e5052557 297 Pfam PF12844 Helix-turn-helix domain 9 67 6.3E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F161 19e445005937c70d749ed8c3e5052557 297 SUPERFAMILY SSF47413 5 65 1.83E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_F161 19e445005937c70d749ed8c3e5052557 297 Gene3D G3DSA:1.25.40.10 1 297 2.4E-79 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_F161 19e445005937c70d749ed8c3e5052557 297 SUPERFAMILY SSF48452 111 272 6.75E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_F161 19e445005937c70d749ed8c3e5052557 297 SMART SM00530 9 63 9.3E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 Pfam PF00344 SecY translocase 68 414 7.5E-110 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 430 28.389 T 14-10-2018 IPR026593 Protein translocase subunit SecY MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 7.8E-97 T 14-10-2018 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 7.8E-97 T 14-10-2018 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 7.8E-97 T 14-10-2018 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 7.8E-97 T 14-10-2018 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 7.8E-97 T 14-10-2018 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 7.8E-97 T 14-10-2018 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 7.8E-97 T 14-10-2018 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 7.8E-97 T 14-10-2018 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 7.8E-97 T 14-10-2018 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 PIRSF PIRSF004557 1 434 7.9E-124 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 SUPERFAMILY SSF103491 1 421 1.57E-124 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 426 2.3E-143 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_1934 40c26f2c0816a00fffc79c81b6cb297d 434 Gene3D G3DSA:1.10.3370.10 1 426 2.1E-154 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 MC28_1333 db7b16a499b29f7868c635bcf74c2566 323 Gene3D G3DSA:3.60.15.10 8 276 4.0E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1333 db7b16a499b29f7868c635bcf74c2566 323 Pfam PF00753 Metallo-beta-lactamase superfamily 32 228 1.6E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_1333 db7b16a499b29f7868c635bcf74c2566 323 SUPERFAMILY SSF56281 3 276 3.54E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1333 db7b16a499b29f7868c635bcf74c2566 323 SMART SM00849 24 228 8.3E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_0018 36f07f8c97b0e8ae0687b1cba21dc293 555 PIRSF PIRSF001294 1 555 3.8E-233 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MC28_0018 36f07f8c97b0e8ae0687b1cba21dc293 555 Pfam PF03814 Potassium-transporting ATPase A subunit 8 552 7.5E-228 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MC28_0018 36f07f8c97b0e8ae0687b1cba21dc293 555 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 3 554 1.4E-201 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MC28_0018 36f07f8c97b0e8ae0687b1cba21dc293 555 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 554 32.477 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 1.1E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 1.1E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 1.1E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 1.1E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 1.1E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 1.1E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 PIRSF PIRSF000513 4 268 5.7E-96 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 12 256 2.2E-94 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 SUPERFAMILY SSF53613 11 267 6.35E-61 T 14-10-2018 IPR029056 Ribokinase-like MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 Pfam PF02110 Hydroxyethylthiazole kinase family 12 254 3.7E-91 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 Gene3D G3DSA:3.40.1190.20 1 269 5.3E-99 T 14-10-2018 IPR029056 Ribokinase-like MC28_5099 9cbfe64d18ca7e766707b1ad00d151d6 269 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 260 33.213 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_0983 ba151f8ac7d35db134885a1deacd4548 307 Pfam PF07730 Histidine kinase 118 184 1.2E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MC28_0983 ba151f8ac7d35db134885a1deacd4548 307 SUPERFAMILY SSF55874 196 307 1.36E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0983 ba151f8ac7d35db134885a1deacd4548 307 Gene3D G3DSA:3.30.565.10 189 306 4.1E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_0641 c6fc78aacee9fa2bbe5f472425528f34 420 PIRSF PIRSF001549 2 414 7.5E-74 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 MC28_0641 c6fc78aacee9fa2bbe5f472425528f34 420 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 18 378 37.041 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 MC28_0641 c6fc78aacee9fa2bbe5f472425528f34 420 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 13 325 4.3E-103 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 MC28_0641 c6fc78aacee9fa2bbe5f472425528f34 420 SUPERFAMILY SSF55681 6 328 6.77E-61 T 14-10-2018 MC28_0641 c6fc78aacee9fa2bbe5f472425528f34 420 Gene3D G3DSA:3.30.930.10 2 325 2.9E-88 T 14-10-2018 MC28_0641 c6fc78aacee9fa2bbe5f472425528f34 420 Pfam PF13393 Histidyl-tRNA synthetase 11 320 9.0E-72 T 14-10-2018 MC28_0051 028ba4b93725884e47364fe241b99ce9 376 SUPERFAMILY SSF56281 122 360 4.06E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_0051 028ba4b93725884e47364fe241b99ce9 376 Gene3D G3DSA:3.60.15.10 119 355 3.4E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_0051 028ba4b93725884e47364fe241b99ce9 376 SMART SM00450 6 109 1.9E-14 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0051 028ba4b93725884e47364fe241b99ce9 376 Pfam PF00753 Metallo-beta-lactamase superfamily 130 274 6.4E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_0051 028ba4b93725884e47364fe241b99ce9 376 SMART SM00849 130 294 2.0E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_0051 028ba4b93725884e47364fe241b99ce9 376 SUPERFAMILY SSF52821 2 110 1.1E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_0051 028ba4b93725884e47364fe241b99ce9 376 Pfam PF00581 Rhodanese-like domain 14 105 7.0E-11 T 14-10-2018 IPR001763 Rhodanese-like domain MC28_0051 028ba4b93725884e47364fe241b99ce9 376 Gene3D G3DSA:3.40.250.10 8 116 2.0E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily MC28_E170 bdde6c47b2bdce3b6abef1b1037802e8 325 SUPERFAMILY SSF57783 11 81 1.33E-6 T 14-10-2018 MC28_E170 bdde6c47b2bdce3b6abef1b1037802e8 325 Gene3D G3DSA:3.40.1360.10 196 316 5.4E-5 T 14-10-2018 MC28_E170 bdde6c47b2bdce3b6abef1b1037802e8 325 Pfam PF13155 Toprim-like 209 296 3.1E-11 T 14-10-2018 MC28_E170 bdde6c47b2bdce3b6abef1b1037802e8 325 Pfam PF13154 Protein of unknown function (DUF3991) 121 188 1.9E-12 T 14-10-2018 IPR025054 Domain of unknown function DUF3991 MC28_1998 e66b57b91c2b215c32bd3e90d36eba56 170 SUPERFAMILY SSF55729 1 163 1.16E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1998 e66b57b91c2b215c32bd3e90d36eba56 170 Gene3D G3DSA:3.40.630.30 1 170 4.8E-52 T 14-10-2018 MC28_1998 e66b57b91c2b215c32bd3e90d36eba56 170 Pfam PF13420 Acetyltransferase (GNAT) domain 2 153 1.1E-21 T 14-10-2018 MC28_4174 4d94ed3c028ce653ddbc300e2d5f688d 383 Gene3D G3DSA:3.90.1150.10 12 378 3.3E-147 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_4174 4d94ed3c028ce653ddbc300e2d5f688d 383 Pfam PF00155 Aminotransferase class I and II 71 378 2.6E-39 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_4174 4d94ed3c028ce653ddbc300e2d5f688d 383 Gene3D G3DSA:3.40.640.10 63 286 3.3E-147 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_4174 4d94ed3c028ce653ddbc300e2d5f688d 383 SUPERFAMILY SSF53383 1 381 1.2E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_4174 4d94ed3c028ce653ddbc300e2d5f688d 383 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 382 7.8E-143 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 MC28_2575 cceceb845c4ce07475c5c76e03ec7db1 428 Pfam PF12791 Anti-sigma factor N-terminus 7 50 7.3E-15 T 14-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal MC28_2327 28edf6bfe8d5f9e6e18617379c0d27e2 115 Gene3D G3DSA:3.40.50.2300 1 113 2.4E-40 T 14-10-2018 MC28_2327 28edf6bfe8d5f9e6e18617379c0d27e2 115 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 110 2.9E-15 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I MC28_2327 28edf6bfe8d5f9e6e18617379c0d27e2 115 SMART SM00226 1 113 4.2E-35 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I MC28_2327 28edf6bfe8d5f9e6e18617379c0d27e2 115 TIGRFAM TIGR02691 arsC_pI258_fam: arsenate reductase (thioredoxin) 1 110 2.2E-52 T 14-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 MC28_2327 28edf6bfe8d5f9e6e18617379c0d27e2 115 SUPERFAMILY SSF52788 1 110 3.79E-33 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily MC28_2078 804136f07ba79fdabcc937037ac9db83 321 Gene3D G3DSA:3.90.245.10 5 319 1.8E-70 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_2078 804136f07ba79fdabcc937037ac9db83 321 SUPERFAMILY SSF53590 6 315 4.32E-78 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_2078 804136f07ba79fdabcc937037ac9db83 321 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 308 2.1E-61 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain MC28_2557 cc072a9a1342d6ade5747decb1d5ba19 131 Gene3D G3DSA:3.30.530.20 1 131 1.4E-46 T 14-10-2018 IPR023393 START-like domain superfamily MC28_2557 cc072a9a1342d6ade5747decb1d5ba19 131 SUPERFAMILY SSF55961 2 128 1.29E-34 T 14-10-2018 MC28_2557 cc072a9a1342d6ade5747decb1d5ba19 131 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 128 1.3E-22 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase MC28_5375 08b8deafa40d59d07fb8365df25cf8e8 432 Pfam PF14285 Domain of unknown function (DUF4367) 72 181 9.0E-8 T 14-10-2018 IPR025377 Domain of unknown function DUF4367 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 Pfam PF06480 FtsH Extracellular 3 82 2.4E-6 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 Pfam PF01434 Peptidase family M41 371 580 4.5E-87 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 Gene3D G3DSA:1.10.8.60 311 385 5.7E-30 T 14-10-2018 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 SMART SM00382 173 312 3.6E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 89 581 1.4E-246 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 ProSitePatterns PS00674 AAA-protein family signature. 280 298 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 597 38.419 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 SUPERFAMILY SSF140990 391 583 5.1E-72 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 177 309 3.3E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 SUPERFAMILY SSF52540 133 381 6.63E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 Gene3D G3DSA:1.20.58.760 386 586 5.5E-74 T 14-10-2018 MC28_4779 f2a74e96d30ddcb5cd884320abf5201d 612 Gene3D G3DSA:3.40.50.300 127 310 1.0E-71 T 14-10-2018 MC28_0495 c71bd02c225d2d51b8364354265a391f 582 Pfam PF13289 SIR2-like domain 128 244 8.7E-9 T 14-10-2018 IPR039444 SIR2-like domain MC28_0495 c71bd02c225d2d51b8364354265a391f 582 Gene3D G3DSA:3.40.50.1220 94 155 3.0E-5 T 14-10-2018 MC28_0495 c71bd02c225d2d51b8364354265a391f 582 SUPERFAMILY SSF52467 7 217 8.88E-8 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_1667 e07d3024ab82cf08b787feedfcc4ab72 519 Gene3D G3DSA:2.60.40.10 420 519 9.1E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1667 e07d3024ab82cf08b787feedfcc4ab72 519 SUPERFAMILY SSF51445 66 327 9.29E-25 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_1667 e07d3024ab82cf08b787feedfcc4ab72 519 Pfam PF02638 Glycosyl hydrolase-like 10 39 358 5.2E-108 T 14-10-2018 IPR003790 Glycosyl hydrolase-like 10 MC28_1667 e07d3024ab82cf08b787feedfcc4ab72 519 Gene3D G3DSA:3.20.20.70 53 231 7.5E-6 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_1144 2513e3dc47ab732fdeb3222796fe616a 179 Pfam PF11611 Domain of unknown function (DUF4352) 55 172 1.5E-29 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 MC28_1144 2513e3dc47ab732fdeb3222796fe616a 179 Gene3D G3DSA:2.60.40.1240 54 179 6.8E-26 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily MC28_3826 644643deafa5d035ef2372770fd91335 291 Pfam PF01497 Periplasmic binding protein 39 267 4.8E-41 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_3826 644643deafa5d035ef2372770fd91335 291 Gene3D G3DSA:3.40.50.1980 33 120 1.6E-33 T 14-10-2018 MC28_3826 644643deafa5d035ef2372770fd91335 291 SUPERFAMILY SSF53807 36 291 1.96E-53 T 14-10-2018 MC28_3826 644643deafa5d035ef2372770fd91335 291 Gene3D G3DSA:3.40.50.1980 121 291 1.6E-59 T 14-10-2018 MC28_3826 644643deafa5d035ef2372770fd91335 291 TIGRFAM TIGR03659 IsdE: heme ABC transporter, heme-binding protein isdE 2 290 2.4E-135 T 14-10-2018 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE GO:0015886|GO:0016020|GO:0020037 MC28_3803 d3b7119ab88f8b7f739ea87c4c13d689 210 SUPERFAMILY SSF46689 18 95 1.49E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3803 d3b7119ab88f8b7f739ea87c4c13d689 210 Gene3D G3DSA:1.10.357.10 65 206 9.5E-34 T 14-10-2018 MC28_3803 d3b7119ab88f8b7f739ea87c4c13d689 210 SUPERFAMILY SSF48498 93 204 6.95E-26 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_3803 d3b7119ab88f8b7f739ea87c4c13d689 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 3.7E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3803 d3b7119ab88f8b7f739ea87c4c13d689 210 Gene3D G3DSA:1.10.10.60 14 64 2.9E-23 T 14-10-2018 MC28_3803 d3b7119ab88f8b7f739ea87c4c13d689 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 2.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3803 d3b7119ab88f8b7f739ea87c4c13d689 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 2.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3803 d3b7119ab88f8b7f739ea87c4c13d689 210 Pfam PF08359 YsiA-like protein, C-terminal region 73 204 2.9E-61 T 14-10-2018 IPR013570 Transcription regulator YsiA, C-terminal MC28_0136 dd40fdd716ff8d590ac5c70e5003ff93 486 SUPERFAMILY SSF56059 214 419 1.77E-11 T 14-10-2018 MC28_0136 dd40fdd716ff8d590ac5c70e5003ff93 486 Gene3D G3DSA:3.30.470.20 311 435 2.3E-6 T 14-10-2018 MC28_0136 dd40fdd716ff8d590ac5c70e5003ff93 486 Pfam PF14398 YheC/D like ATP-grasp 187 442 5.3E-82 T 14-10-2018 IPR026838 Endospore coat-associated protein YheC/D MC28_3907 4f408ef468aac36c411887a20a4288a4 463 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 453 8.9E-213 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 Gene3D G3DSA:1.10.40.30 361 433 1.6E-197 T 14-10-2018 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 454 45.161 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 SUPERFAMILY SSF48557 7 457 4.87E-153 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.9E-70 T 14-10-2018 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 2.9E-70 T 14-10-2018 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 2.9E-70 T 14-10-2018 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 2.9E-70 T 14-10-2018 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 2.9E-70 T 14-10-2018 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.9E-70 T 14-10-2018 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.6E-29 T 14-10-2018 IPR000362 Fumarate lyase family MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.6E-29 T 14-10-2018 IPR000362 Fumarate lyase family MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.6E-29 T 14-10-2018 IPR000362 Fumarate lyase family MC28_3907 4f408ef468aac36c411887a20a4288a4 463 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.6E-29 T 14-10-2018 IPR000362 Fumarate lyase family MC28_3907 4f408ef468aac36c411887a20a4288a4 463 Pfam PF00206 Lyase 7 301 5.4E-83 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal MC28_3907 4f408ef468aac36c411887a20a4288a4 463 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.4E-23 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 Gene3D G3DSA:1.20.200.10 120 448 1.6E-197 T 14-10-2018 MC28_3907 4f408ef468aac36c411887a20a4288a4 463 Gene3D G3DSA:1.10.275.10 26 230 1.6E-197 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal MC28_5097 d5a144538d6b2c7c7b4efda34993d082 981 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 173 4.6E-49 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal MC28_5097 d5a144538d6b2c7c7b4efda34993d082 981 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 760 961 5.8E-49 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal MC28_5097 d5a144538d6b2c7c7b4efda34993d082 981 Pfam PF12698 ABC-2 family transporter protein 24 160 1.8E-8 T 14-10-2018 MC28_5097 d5a144538d6b2c7c7b4efda34993d082 981 Pfam PF01061 ABC-2 type transporter 813 929 3.0E-8 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 MC28_1014 e4393bc1119dedc850afa9b55faa701b 327 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 6.8E-30 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_1014 e4393bc1119dedc850afa9b55faa701b 327 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 324 64.383 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_1014 e4393bc1119dedc850afa9b55faa701b 327 SUPERFAMILY SSF53901 3 324 2.81E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_1014 e4393bc1119dedc850afa9b55faa701b 327 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 324 9.1E-111 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_1014 e4393bc1119dedc850afa9b55faa701b 327 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 186 8.2E-30 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 MC28_1014 e4393bc1119dedc850afa9b55faa701b 327 Gene3D G3DSA:3.40.47.10 1 326 4.9E-116 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_3280 cb414c87944e1295ad1c06ab52237596 265 SUPERFAMILY SSF51735 13 261 3.29E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3280 cb414c87944e1295ad1c06ab52237596 265 Gene3D G3DSA:3.40.50.720 11 265 1.6E-85 T 14-10-2018 MC28_3280 cb414c87944e1295ad1c06ab52237596 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 259 4.5E-61 T 14-10-2018 MC28_3280 cb414c87944e1295ad1c06ab52237596 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3280 cb414c87944e1295ad1c06ab52237596 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3280 cb414c87944e1295ad1c06ab52237596 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 2.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3280 cb414c87944e1295ad1c06ab52237596 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3280 cb414c87944e1295ad1c06ab52237596 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3280 cb414c87944e1295ad1c06ab52237596 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3280 cb414c87944e1295ad1c06ab52237596 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3280 cb414c87944e1295ad1c06ab52237596 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3280 cb414c87944e1295ad1c06ab52237596 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 2.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_0299 094a9232737735b07baeecc95c01a193 422 Pfam PF03703 Bacterial PH domain 341 414 6.3E-9 T 14-10-2018 IPR005182 Domain of unknown function DUF304 MC28_0299 094a9232737735b07baeecc95c01a193 422 Pfam PF03703 Bacterial PH domain 188 271 1.1E-12 T 14-10-2018 IPR005182 Domain of unknown function DUF304 MC28_0299 094a9232737735b07baeecc95c01a193 422 Pfam PF03703 Bacterial PH domain 9 87 1.8E-16 T 14-10-2018 IPR005182 Domain of unknown function DUF304 MC28_0299 094a9232737735b07baeecc95c01a193 422 PIRSF PIRSF026631 1 422 1.0E-129 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 MC28_3830 388291a5ba3bd423499f93d3737f82eb 432 Pfam PF05525 Branched-chain amino acid transport protein 2 423 3.6E-143 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_3830 388291a5ba3bd423499f93d3737f82eb 432 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 6 409 1.0E-136 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_D046 5c1187803bf5b4332db74dd3434befde 194 Pfam PF13958 Toxin ToxN, type III toxin-antitoxin system 8 169 1.8E-42 T 14-10-2018 IPR025911 ToxN/AbiQ toxin GO:0003723|GO:0004521 MC28_D046 5c1187803bf5b4332db74dd3434befde 194 Gene3D G3DSA:2.30.30.890 1 172 1.0E-65 T 14-10-2018 MC28_0386 298f388360b92da99a34503e81f05ffa 65 Pfam PF12758 Protein of unknown function (DUF3813) 1 61 1.0E-26 T 14-10-2018 IPR024217 Protein of unknown function DUF3813 MC28_2554 9201486741e57e4188ddb01e90f1d54b 376 Pfam PF12323 Helix-turn-helix domain 1 45 3.6E-12 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain MC28_2554 9201486741e57e4188ddb01e90f1d54b 376 Pfam PF01385 Probable transposase 170 283 2.9E-14 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 MC28_2554 9201486741e57e4188ddb01e90f1d54b 376 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 250 324 1.1E-7 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_2554 9201486741e57e4188ddb01e90f1d54b 376 Pfam PF07282 Putative transposase DNA-binding domain 300 372 2.8E-18 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.9E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.9E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.9E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.9E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.9E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.9E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 3.4E-5 T 14-10-2018 MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 Gene3D G3DSA:3.40.50.720 1 246 3.3E-92 T 14-10-2018 MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 3.4E-71 T 14-10-2018 MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 245 8.4E-107 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 MC28_3074 5b375386def86a6ca2b37b8a6743686d 246 SUPERFAMILY SSF51735 3 246 9.87E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2481 7d30b4d8635b35f5d01abe10d052502e 54 ProDom PD060054 MEMBRANE SPANNING TRANSMEMBRANE YBEF 1 54 2.0E-19 T 14-10-2018 IPR020258 Uncharacterised protein family YbeF MC28_2481 7d30b4d8635b35f5d01abe10d052502e 54 Pfam PF10852 Protein of unknown function (DUF2651) 1 48 1.4E-17 T 14-10-2018 IPR020258 Uncharacterised protein family YbeF MC28_2597 f3e681ac084119aaa9fcd34cc3e6fb37 254 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 183 1.7E-18 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 MC28_2597 f3e681ac084119aaa9fcd34cc3e6fb37 254 PIRSF PIRSF000883 1 242 2.0E-52 T 14-10-2018 IPR011152 Phosphoesterase MJ0912 MC28_2597 f3e681ac084119aaa9fcd34cc3e6fb37 254 SUPERFAMILY SSF56300 1 233 7.74E-50 T 14-10-2018 MC28_2597 f3e681ac084119aaa9fcd34cc3e6fb37 254 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 181 2.3E-25 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 MC28_2597 f3e681ac084119aaa9fcd34cc3e6fb37 254 Gene3D G3DSA:3.60.21.10 1 243 5.9E-53 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_2035 20622e8f9f376fcca034281433f36911 201 Pfam PF09335 SNARE associated Golgi protein 30 156 1.7E-25 T 14-10-2018 IPR032816 SNARE associated Golgi protein MC28_1078 de94ed92204bc742315bd8549e980b12 555 SUPERFAMILY SSF49503 188 380 6.49E-29 T 14-10-2018 IPR008972 Cupredoxin MC28_1078 de94ed92204bc742315bd8549e980b12 555 ProSitePatterns PS00079 Multicopper oxidases signature 1. 515 535 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site MC28_1078 de94ed92204bc742315bd8549e980b12 555 Pfam PF07731 Multicopper oxidase 424 536 3.9E-28 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 MC28_1078 de94ed92204bc742315bd8549e980b12 555 Pfam PF07732 Multicopper oxidase 75 184 3.6E-36 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 MC28_1078 de94ed92204bc742315bd8549e980b12 555 Gene3D G3DSA:2.60.40.420 406 546 1.8E-39 T 14-10-2018 IPR008972 Cupredoxin MC28_1078 de94ed92204bc742315bd8549e980b12 555 ProSitePatterns PS00080 Multicopper oxidases signature 2. 520 531 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 MC28_1078 de94ed92204bc742315bd8549e980b12 555 SUPERFAMILY SSF49503 415 533 3.17E-35 T 14-10-2018 IPR008972 Cupredoxin MC28_1078 de94ed92204bc742315bd8549e980b12 555 SUPERFAMILY SSF49503 64 184 4.32E-37 T 14-10-2018 IPR008972 Cupredoxin MC28_1078 de94ed92204bc742315bd8549e980b12 555 Pfam PF00394 Multicopper oxidase 253 373 5.0E-15 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 MC28_4038 ca2ff70e063bfa07f25d90418478b2d4 319 Gene3D G3DSA:3.40.50.1820 127 311 1.7E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4038 ca2ff70e063bfa07f25d90418478b2d4 319 SUPERFAMILY SSF53474 133 294 1.43E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1419 71b1131543e4e0e4d588b6018dcdeee9 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 4.0E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MC28_1419 71b1131543e4e0e4d588b6018dcdeee9 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 4.0E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MC28_1419 71b1131543e4e0e4d588b6018dcdeee9 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 4.0E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MC28_1419 71b1131543e4e0e4d588b6018dcdeee9 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 4.0E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MC28_1419 71b1131543e4e0e4d588b6018dcdeee9 247 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 231 15.512 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MC28_1419 71b1131543e4e0e4d588b6018dcdeee9 247 ProSitePatterns PS01218 TatC family signature. 147 166 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site MC28_1419 71b1131543e4e0e4d588b6018dcdeee9 247 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 214 7.1E-52 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MC28_1419 71b1131543e4e0e4d588b6018dcdeee9 247 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 219 1.6E-56 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MC28_3211 5cad296197aeb91fec42b687d5f38a4f 327 SUPERFAMILY SSF50156 114 199 1.14E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 MC28_3211 5cad296197aeb91fec42b687d5f38a4f 327 SMART SM00228 106 173 5.9E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_3211 5cad296197aeb91fec42b687d5f38a4f 327 Gene3D G3DSA:2.30.42.10 109 205 2.0E-26 T 14-10-2018 MC28_3211 5cad296197aeb91fec42b687d5f38a4f 327 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 219 319 8.6E-12 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 MC28_3211 5cad296197aeb91fec42b687d5f38a4f 327 Gene3D G3DSA:3.30.230.10 206 327 5.2E-20 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_3211 5cad296197aeb91fec42b687d5f38a4f 327 Pfam PF13180 PDZ domain 114 180 3.4E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 MC28_3211 5cad296197aeb91fec42b687d5f38a4f 327 SUPERFAMILY SSF54211 215 320 1.44E-23 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_4841 573d609e860643eae11d1f68ef6f605f 146 Gene3D G3DSA:3.100.10.10 66 146 1.2E-28 T 14-10-2018 MC28_4841 573d609e860643eae11d1f68ef6f605f 146 SUPERFAMILY SSF52080 4 144 1.7E-50 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily MC28_4841 573d609e860643eae11d1f68ef6f605f 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 3.1E-38 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P MC28_4841 573d609e860643eae11d1f68ef6f605f 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 2.8E-56 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4841 573d609e860643eae11d1f68ef6f605f 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.824 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 MC28_4841 573d609e860643eae11d1f68ef6f605f 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4942 9f877021dca9a532ecf524234a6900aa 78 Gene3D G3DSA:1.10.1220.10 1 78 8.3E-26 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 MC28_4982 4c6d4e4ac99ae000c4ff57f629f49864 301 SUPERFAMILY SSF103481 186 286 1.18E-13 T 14-10-2018 MC28_4982 4c6d4e4ac99ae000c4ff57f629f49864 301 SUPERFAMILY SSF103481 37 140 4.71E-14 T 14-10-2018 MC28_4982 4c6d4e4ac99ae000c4ff57f629f49864 301 Pfam PF00892 EamA-like transporter family 149 284 4.3E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_4982 4c6d4e4ac99ae000c4ff57f629f49864 301 Pfam PF00892 EamA-like transporter family 14 136 5.8E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_3634 f7494e3d6521a36c9d2f9b8d25e7de14 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 5.6E-21 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3634 f7494e3d6521a36c9d2f9b8d25e7de14 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_3634 f7494e3d6521a36c9d2f9b8d25e7de14 49 Pfam PF00471 Ribosomal protein L33 3 49 3.6E-23 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3634 f7494e3d6521a36c9d2f9b8d25e7de14 49 SUPERFAMILY SSF57829 1 49 1.83E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 MC28_3634 f7494e3d6521a36c9d2f9b8d25e7de14 49 Gene3D G3DSA:2.20.28.120 1 49 1.3E-24 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3634 f7494e3d6521a36c9d2f9b8d25e7de14 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.619 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_3248 00e7739b548f704b1963ff3402b1d3bf 509 Gene3D G3DSA:3.40.640.10 25 301 1.9E-94 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_3248 00e7739b548f704b1963ff3402b1d3bf 509 SUPERFAMILY SSF55904 361 504 2.62E-39 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 MC28_3248 00e7739b548f704b1963ff3402b1d3bf 509 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 240 254 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 MC28_3248 00e7739b548f704b1963ff3402b1d3bf 509 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 25 388 1.0E-113 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 MC28_3248 00e7739b548f704b1963ff3402b1d3bf 509 Gene3D G3DSA:3.90.105.10 439 496 2.1E-18 T 14-10-2018 MC28_3248 00e7739b548f704b1963ff3402b1d3bf 509 SUPERFAMILY SSF53383 25 406 1.61E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_3248 00e7739b548f704b1963ff3402b1d3bf 509 Gene3D G3DSA:3.90.1150.10 328 425 3.2E-6 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_3248 00e7739b548f704b1963ff3402b1d3bf 509 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 422 479 9.1E-10 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 MC28_4856 543b84560c6143b1e3eae894ee510d07 130 Gene3D G3DSA:3.30.230.10 4 130 1.5E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MC28_4856 543b84560c6143b1e3eae894ee510d07 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.859 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid MC28_4856 543b84560c6143b1e3eae894ee510d07 130 SUPERFAMILY SSF54211 5 130 7.59E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold MC28_4856 543b84560c6143b1e3eae894ee510d07 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.1E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 MC28_4856 543b84560c6143b1e3eae894ee510d07 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 MC28_2283 4cb28a758a308f8f8751287b24a8938d 293 Pfam PF01636 Phosphotransferase enzyme family 31 254 8.8E-35 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_2283 4cb28a758a308f8f8751287b24a8938d 293 Gene3D G3DSA:3.30.200.20 6 94 1.2E-12 T 14-10-2018 MC28_2283 4cb28a758a308f8f8751287b24a8938d 293 SUPERFAMILY SSF56112 12 262 2.29E-48 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_2283 4cb28a758a308f8f8751287b24a8938d 293 Gene3D G3DSA:3.90.1200.10 101 291 7.5E-23 T 14-10-2018 MC28_G396 fae70b547a30f4d554ea03c3e579923b 707 Pfam PF13175 AAA ATPase domain 54 534 1.3E-10 T 14-10-2018 MC28_G396 fae70b547a30f4d554ea03c3e579923b 707 Gene3D G3DSA:3.40.50.300 36 198 1.3E-6 T 14-10-2018 MC28_G396 fae70b547a30f4d554ea03c3e579923b 707 SUPERFAMILY SSF52540 55 546 1.77E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G396 fae70b547a30f4d554ea03c3e579923b 707 Gene3D G3DSA:3.40.50.300 422 573 5.5E-7 T 14-10-2018 MC28_3751 4fbd0eb264796732718ca51482e95581 341 Pfam PF01636 Phosphotransferase enzyme family 34 245 1.4E-8 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_3751 4fbd0eb264796732718ca51482e95581 341 SUPERFAMILY SSF56112 12 303 1.46E-21 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_3751 4fbd0eb264796732718ca51482e95581 341 Gene3D G3DSA:3.30.200.20 4 95 1.1E-14 T 14-10-2018 MC28_3751 4fbd0eb264796732718ca51482e95581 341 Gene3D G3DSA:3.90.1200.10 99 326 4.6E-22 T 14-10-2018 MC28_3751 4fbd0eb264796732718ca51482e95581 341 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 9 320 1.0E-133 T 14-10-2018 IPR014253 Spore coat protein YsxE MC28_3981 0d82ae70fa945de5bce95824ec4e4340 265 SUPERFAMILY SSF56112 3 231 1.59E-30 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_3981 0d82ae70fa945de5bce95824ec4e4340 265 Gene3D G3DSA:3.90.1200.10 80 264 2.6E-24 T 14-10-2018 MC28_3981 0d82ae70fa945de5bce95824ec4e4340 265 Pfam PF01636 Phosphotransferase enzyme family 45 230 3.5E-21 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_2101 051424e342c0acbf66244a4c1065b4e0 46 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 45 3.5E-20 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_2101 051424e342c0acbf66244a4c1065b4e0 46 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 46 3.2E-23 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_2535 b3f48a49ab6bec68bdd4014a4098b6c2 123 Pfam PF06993 Protein of unknown function (DUF1304) 11 120 2.4E-39 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 MC28_2418 fde52480dc2d0916d85de6afdff5b2a1 478 Pfam PF01554 MatE 44 200 1.4E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_2418 fde52480dc2d0916d85de6afdff5b2a1 478 Pfam PF01554 MatE 262 425 4.0E-12 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_2418 fde52480dc2d0916d85de6afdff5b2a1 478 PIRSF PIRSF006603 16 472 1.1E-56 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 MC28_1593 4e74e7fa7c307ff0029e6b758522290d 627 Pfam PF02687 FtsX-like permease family 84 180 3.7E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_1593 4e74e7fa7c307ff0029e6b758522290d 627 PIRSF PIRSF018968 1 622 4.5E-63 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_0727 c28735960e9307f50fc284c4e1d45cbe 78 Pfam PF13106 Domain of unknown function (DUF3961) 35 73 1.2E-30 T 14-10-2018 IPR025081 Domain of unknown function DUF3961 MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 Pfam PF00574 Clp protease 13 192 6.4E-87 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 SUPERFAMILY SSF52096 10 192 1.49E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 5.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 5.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 5.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 5.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 5.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 14-10-2018 IPR033135 ClpP, histidine active site MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 Gene3D G3DSA:3.90.226.10 1 193 1.4E-83 T 14-10-2018 MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.202 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 14-10-2018 IPR018215 ClpP, Ser active site MC28_4384 8f3ad25ebff8c36dfa572fc966e4f6f4 193 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 7.8E-107 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_5278 1b4df8f404a7dd92b6ce94210d930179 182 Gene3D G3DSA:2.40.50.140 95 174 5.7E-22 T 14-10-2018 MC28_3363 a86373b12fd9c8cde30d7c9f361a88c3 40 Pfam PF16951 Putative methionine and alanine importer, small subunit 9 37 1.1E-8 T 14-10-2018 IPR031596 Putative methionine and alanine importer, small subunit MC28_5268 ee1666e0453205bda97b1040db9a2451 210 Pfam PF13462 Thioredoxin 38 206 2.6E-36 T 14-10-2018 IPR012336 Thioredoxin-like fold MC28_5268 ee1666e0453205bda97b1040db9a2451 210 Gene3D G3DSA:3.40.30.10 22 210 1.6E-50 T 14-10-2018 MC28_5268 ee1666e0453205bda97b1040db9a2451 210 SUPERFAMILY SSF52833 35 205 1.09E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_2360 e3199c372c231fb236945a2fa2df300f 285 SUPERFAMILY SSF54506 1 278 2.27E-70 T 14-10-2018 MC28_2360 e3199c372c231fb236945a2fa2df300f 285 Gene3D G3DSA:3.10.310.10 129 270 5.0E-43 T 14-10-2018 MC28_2360 e3199c372c231fb236945a2fa2df300f 285 Pfam PF02567 Phenazine biosynthesis-like protein 9 273 7.6E-56 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 MC28_2360 e3199c372c231fb236945a2fa2df300f 285 PIRSF PIRSF016184 1 281 1.4E-81 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 MC28_2360 e3199c372c231fb236945a2fa2df300f 285 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 280 2.0E-56 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 MC28_2360 e3199c372c231fb236945a2fa2df300f 285 Gene3D G3DSA:3.10.310.10 1 126 2.2E-33 T 14-10-2018 MC28_3321 9548a2840167812c80fb781f97b9201d 112 Pfam PF03551 Transcriptional regulator PadR-like family 15 86 1.4E-23 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_3321 9548a2840167812c80fb781f97b9201d 112 SUPERFAMILY SSF46785 11 105 6.97E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3321 9548a2840167812c80fb781f97b9201d 112 Gene3D G3DSA:1.10.10.10 1 111 3.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3970 91ec442ac14be23c2c5e12150a61ade0 318 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 112 311 2.0E-44 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 MC28_3970 91ec442ac14be23c2c5e12150a61ade0 318 SUPERFAMILY SSF53187 110 313 4.08E-36 T 14-10-2018 MC28_3970 91ec442ac14be23c2c5e12150a61ade0 318 Gene3D G3DSA:3.40.630.40 109 318 1.0E-46 T 14-10-2018 MC28_3970 91ec442ac14be23c2c5e12150a61ade0 318 SMART SM00646 192 311 2.6E-13 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 MC28_4135 051c31ea65fe05b5bb6ba47295881fc1 251 Pfam PF07071 KDGP aldolase 9 227 5.4E-106 T 14-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 MC28_4135 051c31ea65fe05b5bb6ba47295881fc1 251 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 9 245 2.5E-117 T 14-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 MC28_4135 051c31ea65fe05b5bb6ba47295881fc1 251 Gene3D G3DSA:3.20.20.70 1 251 4.4E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4126 5b98a8dfd5162e8ee8d7b65e1ecd9c3b 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 216 322 1.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4126 5b98a8dfd5162e8ee8d7b65e1ecd9c3b 340 SMART SM00387 215 327 1.0E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_4126 5b98a8dfd5162e8ee8d7b65e1ecd9c3b 340 Gene3D G3DSA:3.30.565.10 185 337 1.1E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_4126 5b98a8dfd5162e8ee8d7b65e1ecd9c3b 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 253 267 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4126 5b98a8dfd5162e8ee8d7b65e1ecd9c3b 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 305 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4126 5b98a8dfd5162e8ee8d7b65e1ecd9c3b 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 324 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4126 5b98a8dfd5162e8ee8d7b65e1ecd9c3b 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 281 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 MC28_4126 5b98a8dfd5162e8ee8d7b65e1ecd9c3b 340 SUPERFAMILY SSF55874 162 323 1.44E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_3247 14254b0f6fba0b95c3791a6aa193afd9 89 SUPERFAMILY SSF158504 4 86 6.8E-35 T 14-10-2018 IPR023324 BH2638-like superfamily MC28_3247 14254b0f6fba0b95c3791a6aa193afd9 89 Hamap MF_01041 UPF0223 protein . 1 88 27.147 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 MC28_3247 14254b0f6fba0b95c3791a6aa193afd9 89 PIRSF PIRSF037260 1 89 4.0E-40 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 MC28_3247 14254b0f6fba0b95c3791a6aa193afd9 89 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 1 86 3.0E-40 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 MC28_3247 14254b0f6fba0b95c3791a6aa193afd9 89 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 86 1.4E-38 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 MC28_3247 14254b0f6fba0b95c3791a6aa193afd9 89 Gene3D G3DSA:1.10.220.80 12 89 1.4E-30 T 14-10-2018 IPR023324 BH2638-like superfamily MC28_0346 cdb75e978a34c7ac771c3725f2b8072d 287 Pfam PF00892 EamA-like transporter family 4 123 5.0E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0346 cdb75e978a34c7ac771c3725f2b8072d 287 Pfam PF00892 EamA-like transporter family 138 269 2.1E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0346 cdb75e978a34c7ac771c3725f2b8072d 287 SUPERFAMILY SSF103481 173 273 1.44E-12 T 14-10-2018 MC28_0346 cdb75e978a34c7ac771c3725f2b8072d 287 SUPERFAMILY SSF103481 25 125 1.02E-12 T 14-10-2018 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 TIGRFAM TIGR00835 agcS: amino acid carrier protein 51 477 3.0E-160 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 Pfam PF01235 Sodium:alanine symporter family 94 489 9.7E-166 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 Gene3D G3DSA:1.20.1740.10 97 499 1.2E-6 T 14-10-2018 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PRINTS PR00175 Sodium/alanine symporter signature 222 240 6.9E-62 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PRINTS PR00175 Sodium/alanine symporter signature 132 154 6.9E-62 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PRINTS PR00175 Sodium/alanine symporter signature 386 408 6.9E-62 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PRINTS PR00175 Sodium/alanine symporter signature 446 466 6.9E-62 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PRINTS PR00175 Sodium/alanine symporter signature 250 269 6.9E-62 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PRINTS PR00175 Sodium/alanine symporter signature 341 359 6.9E-62 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PIRSF PIRSF006060 35 83 200.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PIRSF PIRSF006060 86 304 1.0E-10 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PIRSF PIRSF006060 407 487 13.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 PIRSF PIRSF006060 336 410 0.53 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_F172 86b9997a57f6b2ff7b59864a473083b8 513 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 132 147 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_3825 0f78ffec5ac6ebe247bf221b5f8b6060 327 Gene3D G3DSA:1.10.3470.10 2 325 6.5E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3825 0f78ffec5ac6ebe247bf221b5f8b6060 327 Pfam PF01032 FecCD transport family 14 320 7.5E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_3825 0f78ffec5ac6ebe247bf221b5f8b6060 327 SUPERFAMILY SSF81345 3 320 1.31E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_0647 3c867c925c310e66846d81385da622ab 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 2.5E-114 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 MC28_0647 3c867c925c310e66846d81385da622ab 252 Gene3D G3DSA:3.20.20.70 1 252 3.0E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0647 3c867c925c310e66846d81385da622ab 252 Pfam PF00977 Histidine biosynthesis protein 5 233 3.6E-89 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 MC28_0647 3c867c925c310e66846d81385da622ab 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 49.209 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 MC28_0647 3c867c925c310e66846d81385da622ab 252 SUPERFAMILY SSF51366 1 251 5.65E-82 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 MC28_0820 aeb6e7928f6aabc2c4b18bebdddc0d9b 197 Pfam PF00156 Phosphoribosyl transferase domain 34 156 9.2E-11 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 MC28_0820 aeb6e7928f6aabc2c4b18bebdddc0d9b 197 SUPERFAMILY SSF53271 1 189 8.91E-48 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_0820 aeb6e7928f6aabc2c4b18bebdddc0d9b 197 Gene3D G3DSA:3.40.50.2020 3 188 8.5E-55 T 14-10-2018 MC28_0820 aeb6e7928f6aabc2c4b18bebdddc0d9b 197 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 190 3.8E-86 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 MC28_0820 aeb6e7928f6aabc2c4b18bebdddc0d9b 197 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 43.007 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 MC28_1015 bb7875605a6c1ee3e96cd2cf987fcd16 178 Gene3D G3DSA:2.40.50.120 22 130 4.2E-5 T 14-10-2018 MC28_1015 bb7875605a6c1ee3e96cd2cf987fcd16 178 SUPERFAMILY SSF50242 22 176 2.51E-29 T 14-10-2018 IPR008993 Tissue inhibitor of metalloproteinases-like, OB-fold MC28_2945 81c04c342a3ba675e6d0197d487c04f1 86 Gene3D G3DSA:3.30.110.20 1 86 7.2E-35 T 14-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 MC28_2945 81c04c342a3ba675e6d0197d487c04f1 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 1.7E-38 T 14-10-2018 IPR007347 Sporulation stage V, protein S MC28_2945 81c04c342a3ba675e6d0197d487c04f1 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 1.0E-40 T 14-10-2018 IPR007347 Sporulation stage V, protein S MC28_2804 bbf6e7f32b9f18920d86200ea8d73661 168 PIRSF PIRSF021441 1 161 6.3E-73 T 14-10-2018 IPR031306 CcdC protein MC28_2804 bbf6e7f32b9f18920d86200ea8d73661 168 Pfam PF07301 Protein of unknown function (DUF1453) 6 149 3.7E-61 T 14-10-2018 IPR009916 Protein of unknown function DUF1453 MC28_E164 b9bb428fa1b2ee217f91f9658c74bf39 515 SMART SM00458 269 404 4.4E-14 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_E164 b9bb428fa1b2ee217f91f9658c74bf39 515 SUPERFAMILY SSF50370 270 404 3.57E-34 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_E164 b9bb428fa1b2ee217f91f9658c74bf39 515 Pfam PF05630 Necrosis inducing protein (NPP1) 50 253 1.2E-58 T 14-10-2018 IPR008701 Necrosis inducing protein MC28_E164 b9bb428fa1b2ee217f91f9658c74bf39 515 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 302 391 1.1E-13 T 14-10-2018 IPR000772 Ricin B, lectin domain MC28_E164 b9bb428fa1b2ee217f91f9658c74bf39 515 Gene3D G3DSA:2.80.10.50 266 407 3.0E-41 T 14-10-2018 MC28_4165 383caf9a9c8c415bf9ec7e3e88ce9c6b 139 SUPERFAMILY SSF160755 4 134 6.02E-37 T 14-10-2018 IPR036491 YugN-like superfamily MC28_4165 383caf9a9c8c415bf9ec7e3e88ce9c6b 139 Gene3D G3DSA:3.30.310.100 6 103 9.9E-31 T 14-10-2018 IPR036491 YugN-like superfamily MC28_4165 383caf9a9c8c415bf9ec7e3e88ce9c6b 139 Pfam PF08868 YugN-like family 5 134 2.2E-53 T 14-10-2018 IPR014967 Uncharacterised protein family, YugN-like MC28_G195 fe9e1ba445a8885f2d89e72c0286c7dc 424 SMART SM01209 108 289 3.2E-4 T 14-10-2018 MC28_G195 fe9e1ba445a8885f2d89e72c0286c7dc 424 Pfam PF13535 ATP-grasp domain 143 293 1.8E-19 T 14-10-2018 MC28_G195 fe9e1ba445a8885f2d89e72c0286c7dc 424 SUPERFAMILY SSF56059 103 317 5.39E-31 T 14-10-2018 MC28_G195 fe9e1ba445a8885f2d89e72c0286c7dc 424 Gene3D G3DSA:3.30.470.20 101 422 6.9E-52 T 14-10-2018 MC28_1504 6a98880b79b11bc1c422d22f78b94bb2 91 Pfam PF06356 Protein of unknown function (DUF1064) 1 68 4.3E-22 T 14-10-2018 IPR009414 Protein of unknown function DUF1064 MC28_1043 4c0e51f01473ee69e97ce4c3402083a3 227 Gene3D G3DSA:3.40.50.1580 1 227 3.0E-54 T 14-10-2018 MC28_1043 4c0e51f01473ee69e97ce4c3402083a3 227 SUPERFAMILY SSF53167 1 226 2.62E-50 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 MC28_1043 4c0e51f01473ee69e97ce4c3402083a3 227 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 225 9.8E-41 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 MC28_1043 4c0e51f01473ee69e97ce4c3402083a3 227 Pfam PF01048 Phosphorylase superfamily 2 224 5.5E-39 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 MC28_C002 17220e28271da3147197d19d837de64e 238 Pfam PF13610 DDE domain 77 215 1.4E-50 T 14-10-2018 IPR032874 DDE domain MC28_C002 17220e28271da3147197d19d837de64e 238 Gene3D G3DSA:3.30.420.10 69 234 1.7E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_C002 17220e28271da3147197d19d837de64e 238 SUPERFAMILY SSF53098 75 194 3.03E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_4513 34666683b6ccbf5bd1a33f0a062efb37 247 Pfam PF13807 G-rich domain on putative tyrosine kinase 142 194 2.2E-8 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain MC28_4513 34666683b6ccbf5bd1a33f0a062efb37 247 Pfam PF02706 Chain length determinant protein 3 93 8.9E-21 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 MC28_3998 87eb3efbdc3a30f8a85714b9842491b0 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 77 4.3E-23 T 14-10-2018 MC28_3998 87eb3efbdc3a30f8a85714b9842491b0 77 Pfam PF02597 ThiS family 4 77 1.1E-16 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 MC28_3998 87eb3efbdc3a30f8a85714b9842491b0 77 Gene3D G3DSA:3.10.20.30 1 77 6.7E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_3998 87eb3efbdc3a30f8a85714b9842491b0 77 SUPERFAMILY SSF54285 1 77 8.22E-18 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MC28_2655 2162b01a24cb6fe3a640ace7e062a5e9 332 Gene3D G3DSA:3.40.50.720 124 300 2.5E-107 T 14-10-2018 MC28_2655 2162b01a24cb6fe3a640ace7e062a5e9 332 Pfam PF13602 Zinc-binding dehydrogenase 186 329 5.7E-36 T 14-10-2018 MC28_2655 2162b01a24cb6fe3a640ace7e062a5e9 332 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 MC28_2655 2162b01a24cb6fe3a640ace7e062a5e9 332 SMART SM00829 11 329 1.1E-26 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_2655 2162b01a24cb6fe3a640ace7e062a5e9 332 SUPERFAMILY SSF50129 1 148 1.11E-36 T 14-10-2018 IPR011032 GroES-like superfamily MC28_2655 2162b01a24cb6fe3a640ace7e062a5e9 332 SUPERFAMILY SSF51735 116 267 4.54E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2655 2162b01a24cb6fe3a640ace7e062a5e9 332 Gene3D G3DSA:3.90.180.10 15 329 2.5E-107 T 14-10-2018 MC28_2655 2162b01a24cb6fe3a640ace7e062a5e9 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 1.6E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_0465 555d4c6463d5f67418521aa35f317140 98 Pfam PF13221 Protein of unknown function (DUF4029) 1 96 3.3E-58 T 14-10-2018 IPR025107 Protein of unknown function DUF4029 MC28_5165 e4502aa29dcb62dbda1644d9deaea6b9 283 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 176 254 2.7E-26 T 14-10-2018 IPR011741 Phage conserved hypothetical protein, C-terminal MC28_5165 e4502aa29dcb62dbda1644d9deaea6b9 283 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 1 114 4.9E-39 T 14-10-2018 IPR010056 Phage replisome organiser, N-terminal domain MC28_5165 e4502aa29dcb62dbda1644d9deaea6b9 283 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 1 114 1.5E-44 T 14-10-2018 IPR010056 Phage replisome organiser, N-terminal domain MC28_5165 e4502aa29dcb62dbda1644d9deaea6b9 283 TIGRFAM TIGR02220 phg_TIGR02220: phage conserved hypothetical protein, C-terminal domain 173 255 1.8E-34 T 14-10-2018 IPR011741 Phage conserved hypothetical protein, C-terminal MC28_1885 e7412a66262e1d761e1054b1c172ad07 54 SUPERFAMILY SSF55811 4 43 3.93E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_1885 e7412a66262e1d761e1054b1c172ad07 54 Pfam PF00293 NUDIX domain 4 48 3.5E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_1885 e7412a66262e1d761e1054b1c172ad07 54 Gene3D G3DSA:3.90.79.10 1 54 8.3E-15 T 14-10-2018 MC28_2790 9ce628d6ebd2e620f8c045e9fbd28e79 524 Pfam PF01645 Conserved region in glutamate synthase 140 491 1.2E-79 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 MC28_2790 9ce628d6ebd2e620f8c045e9fbd28e79 524 PIRSF PIRSF500060 1 524 6.5E-201 T 14-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria MC28_2790 9ce628d6ebd2e620f8c045e9fbd28e79 524 PIRSF PIRSF006429 1 523 7.6E-150 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein MC28_2790 9ce628d6ebd2e620f8c045e9fbd28e79 524 Gene3D G3DSA:3.20.20.70 123 519 3.9E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2790 9ce628d6ebd2e620f8c045e9fbd28e79 524 SUPERFAMILY SSF51395 6 517 2.01E-93 T 14-10-2018 MC28_0966 3a21dcb38ad8dac9b60e5df730eed5fa 266 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 197 264 6.0E-29 T 14-10-2018 IPR018656 Domain of unknown function DUF2087 MC28_B46 01e042bda6fb8a4ed1897602f5a44157 62 Gene3D G3DSA:1.10.260.40 1 58 1.1E-11 T 14-10-2018 MC28_B46 01e042bda6fb8a4ed1897602f5a44157 62 SUPERFAMILY SSF47413 4 59 5.07E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_B46 01e042bda6fb8a4ed1897602f5a44157 62 Pfam PF01381 Helix-turn-helix 4 51 1.8E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_B46 01e042bda6fb8a4ed1897602f5a44157 62 SMART SM00530 1 52 0.0017 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_4358 7457f3e8ce6a50a2bfe4d6103c826041 334 Gene3D G3DSA:3.40.50.1980 51 322 9.7E-71 T 14-10-2018 MC28_4358 7457f3e8ce6a50a2bfe4d6103c826041 334 Pfam PF01497 Periplasmic binding protein 60 311 1.3E-37 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_4358 7457f3e8ce6a50a2bfe4d6103c826041 334 SUPERFAMILY SSF53807 41 318 9.03E-53 T 14-10-2018 MC28_4358 7457f3e8ce6a50a2bfe4d6103c826041 334 Gene3D G3DSA:3.40.50.12260 199 309 9.7E-71 T 14-10-2018 MC28_4731 088f8ea10f7fae44f839ff00561436e5 202 SUPERFAMILY SSF52317 8 195 5.22E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4731 088f8ea10f7fae44f839ff00561436e5 202 Gene3D G3DSA:3.40.50.880 6 201 4.8E-70 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_4731 088f8ea10f7fae44f839ff00561436e5 202 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 9 191 3.3E-91 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_4731 088f8ea10f7fae44f839ff00561436e5 202 PIRSF PIRSF005639 4 197 2.2E-74 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_4731 088f8ea10f7fae44f839ff00561436e5 202 ProSitePatterns PS01236 PdxT/SNO family family signature. 47 57 - T 14-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_4731 088f8ea10f7fae44f839ff00561436e5 202 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 10 192 37.2 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_4731 088f8ea10f7fae44f839ff00561436e5 202 Pfam PF01174 SNO glutamine amidotransferase family 12 194 4.3E-72 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 MC28_2956 26f40d4f775406c47aa1fff0f7209824 237 SUPERFAMILY SSF51735 2 236 4.17E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2956 26f40d4f775406c47aa1fff0f7209824 237 Gene3D G3DSA:3.40.50.720 1 236 8.6E-62 T 14-10-2018 MC28_2956 26f40d4f775406c47aa1fff0f7209824 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2956 26f40d4f775406c47aa1fff0f7209824 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2956 26f40d4f775406c47aa1fff0f7209824 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2956 26f40d4f775406c47aa1fff0f7209824 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2956 26f40d4f775406c47aa1fff0f7209824 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2956 26f40d4f775406c47aa1fff0f7209824 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR MC28_2956 26f40d4f775406c47aa1fff0f7209824 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 236 7.7E-47 T 14-10-2018 MC28_3124 8b718be78be38842f188c870fe25a946 84 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 1 67 4.2E-22 T 14-10-2018 IPR014238 Sporulation protein YlmC/YmxH MC28_3124 8b718be78be38842f188c870fe25a946 84 Pfam PF05239 PRC-barrel domain 2 68 2.0E-10 T 14-10-2018 IPR027275 PRC-barrel domain MC28_3124 8b718be78be38842f188c870fe25a946 84 SUPERFAMILY SSF50346 2 66 3.14E-12 T 14-10-2018 IPR011033 PRC-barrel-like superfamily MC28_3124 8b718be78be38842f188c870fe25a946 84 Gene3D G3DSA:2.30.30.240 1 69 1.3E-12 T 14-10-2018 MC28_E119 9ff3986728a87265d3d8491df10a6353 299 SUPERFAMILY SSF103481 204 286 2.62E-13 T 14-10-2018 MC28_E119 9ff3986728a87265d3d8491df10a6353 299 SUPERFAMILY SSF103481 40 138 2.35E-15 T 14-10-2018 MC28_E119 9ff3986728a87265d3d8491df10a6353 299 Pfam PF00892 EamA-like transporter family 8 136 3.6E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_E119 9ff3986728a87265d3d8491df10a6353 299 Pfam PF00892 EamA-like transporter family 148 281 1.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_G084 2aae036c4851fe871ed675c3e34d603d 52 Pfam PF09992 Phosphodiester glycosidase 1 37 1.5E-6 T 14-10-2018 IPR018711 Phosphodiester glycosidase MC28_4857 5041463a850ddf66885a6cfdd7231bcc 142 Pfam PF10730 Protein of unknown function (DUF2521) 1 142 1.5E-54 T 14-10-2018 IPR019667 Uncharacterised protein family YbaK MC28_D024 6a8ea7798eb52a20d1d5ea0a029096ed 645 SUPERFAMILY SSF52540 204 625 1.11E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_D024 6a8ea7798eb52a20d1d5ea0a029096ed 645 Gene3D G3DSA:3.40.50.300 214 408 3.6E-13 T 14-10-2018 MC28_D024 6a8ea7798eb52a20d1d5ea0a029096ed 645 Gene3D G3DSA:3.40.50.300 424 645 5.7E-33 T 14-10-2018 MC28_3911 de112adb0526a7b58bc7cb59edbba730 206 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 1 184 2.5E-43 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_0741 5b860c2c5b02bec4981df642c3c883e6 67 Pfam PF10966 Protein of unknown function (DUF2768) 7 64 7.5E-26 T 14-10-2018 IPR020076 Protein of unknown function DUF2768 MC28_0741 5b860c2c5b02bec4981df642c3c883e6 67 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 1 67 3.0E-27 T 14-10-2018 IPR020076 Protein of unknown function DUF2768 MC28_5416 d8462ac45d423f769c2f6471b0be6ae3 448 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 29 429 1.5E-124 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_5416 d8462ac45d423f769c2f6471b0be6ae3 448 Pfam PF05525 Branched-chain amino acid transport protein 21 441 1.4E-141 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_4113 8d8b35842c13fb9aecc87037bfb930e6 199 Pfam PF09335 SNARE associated Golgi protein 31 155 9.0E-24 T 14-10-2018 IPR032816 SNARE associated Golgi protein MC28_0525 d352bc25c8d7b0470a3b6fabd7cc72a2 442 PIRSF PIRSF000139 5 441 5.4E-160 T 14-10-2018 MC28_0525 d352bc25c8d7b0470a3b6fabd7cc72a2 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MC28_0525 d352bc25c8d7b0470a3b6fabd7cc72a2 442 Pfam PF02754 Cysteine-rich domain 197 277 1.0E-18 T 14-10-2018 IPR004017 Cysteine-rich domain MC28_0525 d352bc25c8d7b0470a3b6fabd7cc72a2 442 Pfam PF02754 Cysteine-rich domain 328 413 8.3E-14 T 14-10-2018 IPR004017 Cysteine-rich domain MC28_0525 d352bc25c8d7b0470a3b6fabd7cc72a2 442 Pfam PF13183 4Fe-4S dicluster domain 22 91 1.9E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MC28_0525 d352bc25c8d7b0470a3b6fabd7cc72a2 442 SUPERFAMILY SSF46548 9 105 1.52E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 MC28_0525 d352bc25c8d7b0470a3b6fabd7cc72a2 442 Gene3D G3DSA:1.10.1060.10 2 112 2.1E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 MC28_2916 e04002e5bbecb6d2860972da2bfc3f76 354 Gene3D G3DSA:3.40.50.2000 6 161 1.2E-84 T 14-10-2018 MC28_2916 e04002e5bbecb6d2860972da2bfc3f76 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 139 2.1E-33 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_2916 e04002e5bbecb6d2860972da2bfc3f76 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 353 26.387 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_2916 e04002e5bbecb6d2860972da2bfc3f76 354 SUPERFAMILY SSF53756 3 348 1.5E-86 T 14-10-2018 MC28_2916 e04002e5bbecb6d2860972da2bfc3f76 354 Gene3D G3DSA:3.40.50.2000 162 318 1.2E-84 T 14-10-2018 MC28_2916 e04002e5bbecb6d2860972da2bfc3f76 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 186 337 1.9E-26 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 MC28_1329 289543921beaea2e7e03d4fcb19e2e63 51 SUPERFAMILY SSF88946 3 51 2.24E-6 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0833 885fa4d677384845bb795e363e14375e 128 Pfam PF03994 Domain of Unknown Function (DUF350) 7 58 5.8E-11 T 14-10-2018 IPR007140 Protein of unknown function DUF350 MC28_0833 885fa4d677384845bb795e363e14375e 128 Pfam PF03994 Domain of Unknown Function (DUF350) 72 126 6.1E-15 T 14-10-2018 IPR007140 Protein of unknown function DUF350 MC28_2611 ea95664a122d4147cd1767c8f389719c 81 Pfam PF10779 Haemolysin XhlA 13 76 1.7E-9 T 14-10-2018 IPR019715 Haemolysin XhlA MC28_1135 e89681ea85b6a1488d0567e0117ea6f2 318 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 231 314 2.2E-15 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MC28_1135 e89681ea85b6a1488d0567e0117ea6f2 318 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 19 197 2.0E-45 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain MC28_1135 e89681ea85b6a1488d0567e0117ea6f2 318 SMART SM00833 231 316 1.1E-17 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MC28_1135 e89681ea85b6a1488d0567e0117ea6f2 318 SUPERFAMILY SSF52540 11 277 2.23E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1135 e89681ea85b6a1488d0567e0117ea6f2 318 Gene3D G3DSA:3.40.50.300 14 212 1.4E-50 T 14-10-2018 MC28_1135 e89681ea85b6a1488d0567e0117ea6f2 318 Gene3D G3DSA:3.30.1220.10 213 317 8.2E-11 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily MC28_2304 51fda1fd6c313d35fe88f0e77ae351a4 292 SUPERFAMILY SSF53850 93 286 1.45E-28 T 14-10-2018 MC28_2304 51fda1fd6c313d35fe88f0e77ae351a4 292 Gene3D G3DSA:1.10.10.10 1 90 2.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2304 51fda1fd6c313d35fe88f0e77ae351a4 292 Pfam PF03466 LysR substrate binding domain 91 284 7.4E-30 T 14-10-2018 IPR005119 LysR, substrate-binding MC28_2304 51fda1fd6c313d35fe88f0e77ae351a4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2304 51fda1fd6c313d35fe88f0e77ae351a4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2304 51fda1fd6c313d35fe88f0e77ae351a4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2304 51fda1fd6c313d35fe88f0e77ae351a4 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.7E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MC28_2304 51fda1fd6c313d35fe88f0e77ae351a4 292 Gene3D G3DSA:3.40.190.290 91 290 2.3E-30 T 14-10-2018 MC28_2304 51fda1fd6c313d35fe88f0e77ae351a4 292 SUPERFAMILY SSF46785 1 85 5.44E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1236 9f1bd26593efdd6009e701a3630547e9 151 Pfam PF13075 Protein of unknown function (DUF3939) 10 140 7.2E-46 T 14-10-2018 IPR025071 Protein of unknown function DUF3939 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 ProDom PD003946 PHOSPHOLIPASE C PLCB HYDROLASE PRECURSOR PHOSPHATIDYLCHOLINE SIGNAL CHOLINEPHOSPHOHYDROLASE TOXIN PLC 47 275 2.0E-133 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 Gene3D G3DSA:1.10.575.10 39 283 8.0E-107 T 14-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 SMART SM00770 1 283 6.1E-131 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 PRINTS PR00479 Prokaryotic zinc-dependent phospholipase C signature 153 177 5.5E-28 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 PRINTS PR00479 Prokaryotic zinc-dependent phospholipase C signature 107 120 5.5E-28 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 PRINTS PR00479 Prokaryotic zinc-dependent phospholipase C signature 130 152 5.5E-28 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 PRINTS PR00479 Prokaryotic zinc-dependent phospholipase C signature 180 197 5.5E-28 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 PRINTS PR00479 Prokaryotic zinc-dependent phospholipase C signature 266 276 5.5E-28 T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 ProSitePatterns PS00384 Prokaryotic zinc-dependent phospholipase C signature. 156 169 - T 14-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 Pfam PF00882 Zinc dependent phospholipase C 51 230 8.0E-21 T 14-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 MC28_5401 b58f2cf05a0d91dd95a115d9577af722 283 SUPERFAMILY SSF48537 39 281 2.22E-63 T 14-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 MC28_3704 9cee7bd320d1e2f693370e504d492461 97 Pfam PF13797 Post-transcriptional regulator 11 93 4.1E-31 T 14-10-2018 IPR025716 Post-transcriptional regulator MC28_0180 4f81c331ec9e2e275f22b6f8de7f4f4e 322 SUPERFAMILY SSF53850 113 289 1.74E-11 T 14-10-2018 MC28_0180 4f81c331ec9e2e275f22b6f8de7f4f4e 322 PIRSF PIRSF017082 1 321 1.1E-87 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 MC28_0180 4f81c331ec9e2e275f22b6f8de7f4f4e 322 Gene3D G3DSA:3.40.190.10 125 251 7.4E-61 T 14-10-2018 MC28_0180 4f81c331ec9e2e275f22b6f8de7f4f4e 322 Gene3D G3DSA:3.40.190.150 33 316 7.4E-61 T 14-10-2018 MC28_0180 4f81c331ec9e2e275f22b6f8de7f4f4e 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 320 1.3E-24 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 MC28_1971 188d6ba01536cbc2d8373560849faf71 278 Pfam PF13672 Protein phosphatase 2C 41 223 1.7E-18 T 14-10-2018 MC28_1971 188d6ba01536cbc2d8373560849faf71 278 SUPERFAMILY SSF81606 43 254 2.22E-12 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_1971 188d6ba01536cbc2d8373560849faf71 278 Gene3D G3DSA:3.60.40.10 21 262 7.4E-12 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_3880 ca3e9258405b6b0ea7f885974486cdc3 214 Gene3D G3DSA:1.10.10.10 2 72 1.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3880 ca3e9258405b6b0ea7f885974486cdc3 214 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 3.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3880 ca3e9258405b6b0ea7f885974486cdc3 214 SUPERFAMILY SSF46785 4 86 5.55E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3880 ca3e9258405b6b0ea7f885974486cdc3 214 SMART SM00345 12 71 5.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3880 ca3e9258405b6b0ea7f885974486cdc3 214 Gene3D G3DSA:1.20.120.530 79 213 3.0E-5 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal MC28_3880 ca3e9258405b6b0ea7f885974486cdc3 214 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 9.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3880 ca3e9258405b6b0ea7f885974486cdc3 214 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 9.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_2417 a4f642f38638c22ff14bb698dfcddfd0 93 Pfam PF05899 Protein of unknown function (DUF861) 13 84 1.1E-11 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 MC28_2417 a4f642f38638c22ff14bb698dfcddfd0 93 Gene3D G3DSA:2.60.120.10 2 86 4.2E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_2417 a4f642f38638c22ff14bb698dfcddfd0 93 SUPERFAMILY SSF51182 10 75 3.69E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_D012 a6a163d3213c446fdab5b26f13167392 120 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 7 120 2.0E-53 T 14-10-2018 MC28_1330 c09ffc647e575d09aa07f5c5e3b9a6ac 272 SUPERFAMILY SSF88659 22 61 2.8E-5 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_1330 c09ffc647e575d09aa07f5c5e3b9a6ac 272 Gene3D G3DSA:1.10.3950.10 115 272 2.7E-67 T 14-10-2018 IPR038267 Putative ECF-type sigma factor negative effector MC28_1330 c09ffc647e575d09aa07f5c5e3b9a6ac 272 Pfam PF12207 Domain of unknown function (DUF3600) 111 270 2.0E-78 T 14-10-2018 IPR022019 Domain of unknown function DUF3600 MC28_0853 262ccf5be5cd89ee20226d43e26b72c0 113 Pfam PF04341 Protein of unknown function, DUF485 22 105 8.6E-23 T 14-10-2018 IPR007436 Protein of unknown function DUF485 MC28_2705 b1218ca7e408559122b741b184a7c4dd 49 Pfam PF14151 YfhD-like protein 2 45 8.1E-20 T 14-10-2018 IPR025435 YfhD-like protein MC28_5126 fe58257291d98f3effedb46c25228424 192 Gene3D G3DSA:2.60.60.30 19 187 1.1E-71 T 14-10-2018 MC28_5126 fe58257291d98f3effedb46c25228424 192 Pfam PF02342 TerD domain 1 188 4.1E-84 T 14-10-2018 IPR003325 TerD domain MC28_5041 0af74c67381b99056322513fa3fefde4 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 477 1.4E-201 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 MC28_5041 0af74c67381b99056322513fa3fefde4 483 SUPERFAMILY SSF53720 14 482 5.89E-172 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_5041 0af74c67381b99056322513fa3fefde4 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 MC28_5041 0af74c67381b99056322513fa3fefde4 483 Pfam PF00171 Aldehyde dehydrogenase family 25 478 7.7E-173 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_5041 0af74c67381b99056322513fa3fefde4 483 Gene3D G3DSA:3.40.605.10 21 474 8.8E-182 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_5041 0af74c67381b99056322513fa3fefde4 483 Gene3D G3DSA:3.40.309.10 261 451 8.8E-182 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_1431 a4fe47bf6800a54ea0159623c65046d1 215 Gene3D G3DSA:3.40.109.10 5 214 4.9E-54 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_1431 a4fe47bf6800a54ea0159623c65046d1 215 Pfam PF00881 Nitroreductase family 10 194 1.9E-35 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_1431 a4fe47bf6800a54ea0159623c65046d1 215 SUPERFAMILY SSF55469 6 213 2.62E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_2196 cbf9ce5941deb699fcd5ce9f69013b4b 192 SUPERFAMILY SSF55729 12 186 3.36E-54 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2196 cbf9ce5941deb699fcd5ce9f69013b4b 192 Gene3D G3DSA:3.40.630.30 7 191 4.7E-52 T 14-10-2018 MC28_2196 cbf9ce5941deb699fcd5ce9f69013b4b 192 Pfam PF13302 Acetyltransferase (GNAT) domain 21 161 7.8E-34 T 14-10-2018 IPR000182 GNAT domain MC28_5319 6ec5cadef02d64b6b1f2508c7068b0a0 193 Gene3D G3DSA:3.40.50.150 19 178 1.9E-11 T 14-10-2018 MC28_5319 6ec5cadef02d64b6b1f2508c7068b0a0 193 SUPERFAMILY SSF53335 48 160 2.03E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2996 00ec7421d0cdd784ddea365311f09e2a 383 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 25 235 8.3E-14 T 14-10-2018 IPR024455 Phage capsid MC28_2996 00ec7421d0cdd784ddea365311f09e2a 383 SUPERFAMILY SSF56563 90 364 1.15E-15 T 14-10-2018 MC28_2996 00ec7421d0cdd784ddea365311f09e2a 383 Pfam PF05065 Phage capsid family 90 258 2.1E-10 T 14-10-2018 IPR024455 Phage capsid MC28_2865 8aa5855df8f7d507612735144aa915bf 129 Pfam PF13411 MerR HTH family regulatory protein 13 76 3.7E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_2865 8aa5855df8f7d507612735144aa915bf 129 SMART SM00422 11 79 6.8E-24 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_2865 8aa5855df8f7d507612735144aa915bf 129 Gene3D G3DSA:1.10.1660.10 2 83 8.2E-24 T 14-10-2018 MC28_2865 8aa5855df8f7d507612735144aa915bf 129 SUPERFAMILY SSF46955 11 90 3.85E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_2865 8aa5855df8f7d507612735144aa915bf 129 ProSitePatterns PS00552 MerR-type HTH domain signature. 14 36 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_2581 23d14884b73bbadaf90d7b6dcb40f7b4 159 Gene3D G3DSA:3.20.80.10 2 159 6.9E-17 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily MC28_2581 23d14884b73bbadaf90d7b6dcb40f7b4 159 SMART SM00871 2 157 1.9E-5 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding MC28_2581 23d14884b73bbadaf90d7b6dcb40f7b4 159 Pfam PF14526 Integron-associated effector binding protein 5 156 5.3E-31 T 14-10-2018 IPR029441 Integron-associated effector binding protein MC28_1757 62467c6eba5e023edb0057c31dd4aa9d 282 Gene3D G3DSA:3.40.630.30 142 274 6.4E-10 T 14-10-2018 MC28_1757 62467c6eba5e023edb0057c31dd4aa9d 282 SUPERFAMILY SSF55729 182 272 1.95E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1757 62467c6eba5e023edb0057c31dd4aa9d 282 Gene3D G3DSA:3.40.630.30 8 141 2.4E-19 T 14-10-2018 MC28_1757 62467c6eba5e023edb0057c31dd4aa9d 282 Pfam PF13673 Acetyltransferase (GNAT) domain 174 272 3.8E-9 T 14-10-2018 IPR000182 GNAT domain MC28_1757 62467c6eba5e023edb0057c31dd4aa9d 282 SUPERFAMILY SSF55729 28 145 6.97E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1757 62467c6eba5e023edb0057c31dd4aa9d 282 Pfam PF00583 Acetyltransferase (GNAT) family 39 134 9.8E-12 T 14-10-2018 IPR000182 GNAT domain MC28_D005 bbb51848cddccf0d26d189b16bd5ddc1 884 ProDom PD322775 PLASMID PXO2-28/BXB0027/GBAA_PXO2_0027 PXO2-28 533 884 2.0E-122 T 14-10-2018 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 Gene3D G3DSA:2.60.40.1430 415 523 2.1E-48 T 14-10-2018 IPR038700 Thiol-activated cytolysin, C-terminal domain superfamily MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 Pfam PF01289 Thiol-activated cytolysin 62 413 1.4E-146 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 Gene3D G3DSA:3.90.840.10 62 397 2.7E-140 T 14-10-2018 IPR036363 Thiol-activated cytolysin, alpha-beta domain superfamily GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 Gene3D G3DSA:3.40.30.40 203 373 2.7E-140 T 14-10-2018 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 Gene3D G3DSA:3.30.1040.20 78 409 2.7E-140 T 14-10-2018 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 ProSitePatterns PS00481 Thiol-activated cytolysins signature. 481 492 - T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 SUPERFAMILY SSF56978 56 522 1.7E-202 T 14-10-2018 IPR036359 Thiol-activated cytolysin superfamily GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 383 410 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 69 86 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 201 216 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 282 305 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 439 455 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 143 161 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 99 121 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 335 352 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 127 143 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 422 439 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 497 517 2.7E-103 T 14-10-2018 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 MC28_G198 01c7a73238eab9ff361dac805d043ac9 523 Pfam PF17440 Thiol-activated cytolysin beta sandwich domain 417 517 3.2E-42 T 14-10-2018 IPR035390 Thiol-activated cytolysin C-terminal MC28_3445 06b8407ea575647a477063d044bdfc3d 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 256 1.4E-58 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_3445 06b8407ea575647a477063d044bdfc3d 259 SUPERFAMILY SSF53850 1 257 9.56E-66 T 14-10-2018 MC28_3445 06b8407ea575647a477063d044bdfc3d 259 SMART SM00062 35 258 7.5E-69 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_3445 06b8407ea575647a477063d044bdfc3d 259 SMART SM00079 35 257 3.8E-5 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 MC28_3445 06b8407ea575647a477063d044bdfc3d 259 Gene3D G3DSA:3.40.190.10 123 215 2.6E-64 T 14-10-2018 MC28_3445 06b8407ea575647a477063d044bdfc3d 259 Gene3D G3DSA:3.40.190.10 37 256 2.6E-64 T 14-10-2018 MC28_3445 06b8407ea575647a477063d044bdfc3d 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 60 73 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site MC28_4483 4fd5340864cf307064e82042121c9bb9 181 PIRSF PIRSF011560 21 181 5.0E-53 T 14-10-2018 IPR010461 Competence protein ComK GO:0030420 MC28_4483 4fd5340864cf307064e82042121c9bb9 181 Pfam PF06338 ComK protein 29 177 1.7E-49 T 14-10-2018 IPR010461 Competence protein ComK GO:0030420 MC28_4573 c36ed2975abd21c6b31ecb178b7ddc9a 174 Gene3D G3DSA:3.40.50.10490 1 174 8.7E-59 T 14-10-2018 MC28_4573 c36ed2975abd21c6b31ecb178b7ddc9a 174 Pfam PF10740 Domain of unknown function (DUF2529) 1 171 3.5E-67 T 14-10-2018 IPR019676 Domain of unknown function (DUF2529) MC28_2525 eb2ead895b0d0880ffaf374e944f313e 189 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 4 185 1.8E-11 T 14-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 MC28_2525 eb2ead895b0d0880ffaf374e944f313e 189 Gene3D G3DSA:3.40.50.1000 1 173 6.4E-30 T 14-10-2018 IPR023214 HAD superfamily MC28_2525 eb2ead895b0d0880ffaf374e944f313e 189 PIRSF PIRSF021362 1 189 8.0E-77 T 14-10-2018 IPR009206 Nucleotidase, putative MC28_2525 eb2ead895b0d0880ffaf374e944f313e 189 SUPERFAMILY SSF56784 3 180 3.29E-27 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3912 208b08aaa7cc5ed49a90c5de0e0a2270 281 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 37 277 3.0E-6 T 14-10-2018 MC28_3912 208b08aaa7cc5ed49a90c5de0e0a2270 281 Pfam PF12787 EcsC protein family 12 274 5.4E-57 T 14-10-2018 IPR024787 EcsC protein MC28_5159 20d8fd682adfc680a372c057c7e25acb 116 SUPERFAMILY SSF47413 3 67 1.26E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_5159 20d8fd682adfc680a372c057c7e25acb 116 Pfam PF12844 Helix-turn-helix domain 3 66 1.4E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5159 20d8fd682adfc680a372c057c7e25acb 116 Gene3D G3DSA:1.10.260.40 1 116 6.2E-22 T 14-10-2018 MC28_5159 20d8fd682adfc680a372c057c7e25acb 116 SMART SM00530 5 60 3.4E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_2123 7a6e7db01121a641d7433a18c1ff6a09 233 SUPERFAMILY SSF81301 4 109 1.09E-10 T 14-10-2018 MC28_2123 7a6e7db01121a641d7433a18c1ff6a09 233 Gene3D G3DSA:3.30.460.10 5 113 3.0E-9 T 14-10-2018 MC28_2123 7a6e7db01121a641d7433a18c1ff6a09 233 Pfam PF01909 Nucleotidyltransferase domain 23 43 1.1E-4 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 MC28_2023 0807179409af0f5b5faa437ef2198d9e 345 Gene3D G3DSA:3.10.310.10 7 333 6.5E-125 T 14-10-2018 MC28_2023 0807179409af0f5b5faa437ef2198d9e 345 PIRSF PIRSF029792 1 334 5.3E-141 T 14-10-2018 IPR008794 Proline racemase family MC28_2023 0807179409af0f5b5faa437ef2198d9e 345 SUPERFAMILY SSF54506 1 331 7.72E-114 T 14-10-2018 MC28_2023 0807179409af0f5b5faa437ef2198d9e 345 Gene3D G3DSA:3.10.310.10 146 310 6.5E-125 T 14-10-2018 MC28_2023 0807179409af0f5b5faa437ef2198d9e 345 Pfam PF05544 Proline racemase 10 331 1.4E-117 T 14-10-2018 IPR008794 Proline racemase family MC28_2173 d1c3da5243e4386d4558117e2731ebd0 404 Pfam PF07690 Major Facilitator Superfamily 31 344 1.0E-33 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2173 d1c3da5243e4386d4558117e2731ebd0 404 Gene3D G3DSA:1.20.1250.20 3 387 3.5E-41 T 14-10-2018 MC28_2173 d1c3da5243e4386d4558117e2731ebd0 404 SUPERFAMILY SSF103473 6 390 4.71E-50 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0107 fb89cbdef1af831fdadcc398a9168ca9 158 Gene3D G3DSA:3.40.630.30 9 149 6.0E-28 T 14-10-2018 MC28_0107 fb89cbdef1af831fdadcc398a9168ca9 158 Pfam PF00583 Acetyltransferase (GNAT) family 47 123 7.0E-13 T 14-10-2018 IPR000182 GNAT domain MC28_0107 fb89cbdef1af831fdadcc398a9168ca9 158 SUPERFAMILY SSF55729 8 156 1.2E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1925 46ef347c8c001ad75dc937c009803f8f 476 Pfam PF02687 FtsX-like permease family 342 468 1.6E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_1511 e26f7ddb074e4ec7c20ac564fcee12ff 281 SMART SM00901 29 133 9.2E-20 T 14-10-2018 IPR014966 FRG domain MC28_1511 e26f7ddb074e4ec7c20ac564fcee12ff 281 Pfam PF08867 FRG domain 33 122 6.5E-20 T 14-10-2018 IPR014966 FRG domain MC28_0720 5edee6094691302b89bb777ee413a5ce 188 Pfam PF02517 CAAX protease self-immunity 98 180 2.6E-11 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_2739 ade2f50966caa6c8d3abe88a9a373a96 345 Gene3D G3DSA:1.10.260.150 56 345 1.2E-75 T 14-10-2018 MC28_2739 ade2f50966caa6c8d3abe88a9a373a96 345 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 98 253 5.5E-32 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_2739 ade2f50966caa6c8d3abe88a9a373a96 345 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 97 253 8.1E-39 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_5303 e6b8719f83e4f2a0ace93ad7f2bdb7a8 174 Gene3D G3DSA:2.60.40.3830 36 174 4.7E-52 T 14-10-2018 MC28_5303 e6b8719f83e4f2a0ace93ad7f2bdb7a8 174 Pfam PF16167 Domain of unknown function (DUF4871) 44 171 1.4E-80 T 14-10-2018 IPR032366 Protein of unknown function DUF4871 MC28_0952 761b73fd24538fde1c10daa3fb2bf906 56 Pfam PF13076 Fur-regulated basic protein A 12 46 3.0E-17 T 14-10-2018 IPR025072 Fur-regulated basic protein A MC28_0850 3b5da1f39b24155874745a7360288553 247 Pfam PF01810 LysE type translocator 50 241 7.1E-31 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 MC28_0148 016b6cf4bd4e0ad96498368e0b998c0e 489 Pfam PF01740 STAS domain 401 476 4.6E-7 T 14-10-2018 IPR002645 STAS domain MC28_0148 016b6cf4bd4e0ad96498368e0b998c0e 489 Gene3D G3DSA:3.30.750.24 385 476 1.9E-11 T 14-10-2018 IPR036513 STAS domain superfamily MC28_0148 016b6cf4bd4e0ad96498368e0b998c0e 489 Pfam PF00916 Sulfate permease family 8 134 2.7E-25 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 MC28_0148 016b6cf4bd4e0ad96498368e0b998c0e 489 Pfam PF00916 Sulfate permease family 140 359 9.6E-39 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 MC28_0148 016b6cf4bd4e0ad96498368e0b998c0e 489 SUPERFAMILY SSF52091 397 476 5.3E-12 T 14-10-2018 IPR036513 STAS domain superfamily MC28_4867 ea9ca22c2709e20adc811513707c6188 491 Pfam PF07949 YbbR-like protein 142 225 2.3E-12 T 14-10-2018 IPR012505 YbbR-like MC28_4867 ea9ca22c2709e20adc811513707c6188 491 Pfam PF07949 YbbR-like protein 54 132 1.3E-10 T 14-10-2018 IPR012505 YbbR-like MC28_4867 ea9ca22c2709e20adc811513707c6188 491 Pfam PF07949 YbbR-like protein 240 319 8.6E-17 T 14-10-2018 IPR012505 YbbR-like MC28_4867 ea9ca22c2709e20adc811513707c6188 491 Pfam PF07949 YbbR-like protein 337 416 3.8E-6 T 14-10-2018 IPR012505 YbbR-like MC28_4867 ea9ca22c2709e20adc811513707c6188 491 Gene3D G3DSA:2.170.120.30 323 427 5.9E-13 T 14-10-2018 MC28_4867 ea9ca22c2709e20adc811513707c6188 491 Gene3D G3DSA:2.170.120.30 40 142 1.9E-21 T 14-10-2018 MC28_4867 ea9ca22c2709e20adc811513707c6188 491 Gene3D G3DSA:2.170.120.40 236 322 2.4E-20 T 14-10-2018 MC28_4867 ea9ca22c2709e20adc811513707c6188 491 Gene3D G3DSA:2.170.120.40 143 229 1.2E-10 T 14-10-2018 MC28_4551 7ed09f5a23a1305a6d06500dd4f9a693 37 Pfam PF13216 Protein of unknown function (DUF4024) 1 35 1.7E-29 T 14-10-2018 IPR025099 Protein of unknown function DUF4024 MC28_D017 80015539acd7ee052c8526da0bef6f5d 875 SUPERFAMILY SSF52540 172 709 2.18E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_D017 80015539acd7ee052c8526da0bef6f5d 875 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 164 409 4.3E-22 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 MC28_D017 80015539acd7ee052c8526da0bef6f5d 875 Pfam PF12696 TraM recognition site of TraD and TraG 585 700 1.1E-25 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site MC28_D017 80015539acd7ee052c8526da0bef6f5d 875 Gene3D G3DSA:3.40.50.300 528 727 7.3E-27 T 14-10-2018 MC28_5146 e11d36998963be5293a52b812cf5c9fa 375 Gene3D G3DSA:3.20.20.70 28 341 2.2E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_5146 e11d36998963be5293a52b812cf5c9fa 375 Pfam PF04055 Radical SAM superfamily 37 173 4.7E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_5146 e11d36998963be5293a52b812cf5c9fa 375 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 9 370 4.8E-192 T 14-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB MC28_5146 e11d36998963be5293a52b812cf5c9fa 375 Pfam PF13353 4Fe-4S single cluster domain 41 119 3.6E-7 T 14-10-2018 MC28_5146 e11d36998963be5293a52b812cf5c9fa 375 Pfam PF08756 YfkB-like domain 221 370 1.6E-75 T 14-10-2018 IPR014866 YfkB-like domain MC28_5146 e11d36998963be5293a52b812cf5c9fa 375 SUPERFAMILY SSF102114 34 329 4.45E-26 T 14-10-2018 MC28_2555 ab28fa80bdced15c25211541509312fb 125 SUPERFAMILY SSF46785 12 117 2.0E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2555 ab28fa80bdced15c25211541509312fb 125 Gene3D G3DSA:1.10.10.10 11 125 1.7E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2555 ab28fa80bdced15c25211541509312fb 125 Pfam PF01638 HxlR-like helix-turn-helix 25 113 1.4E-37 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type MC28_2053 165db03c9b62bea9eca377211e4edbe5 152 Gene3D G3DSA:3.40.630.30 2 147 4.6E-29 T 14-10-2018 MC28_2053 165db03c9b62bea9eca377211e4edbe5 152 SUPERFAMILY SSF55729 37 136 3.6E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2053 165db03c9b62bea9eca377211e4edbe5 152 Pfam PF13673 Acetyltransferase (GNAT) domain 34 135 1.4E-10 T 14-10-2018 IPR000182 GNAT domain MC28_G113 c8316b173dda7683b772b98163117f33 682 Pfam PF00395 S-layer homology domain 622 665 0.016 T 14-10-2018 IPR001119 S-layer homology domain MC28_G113 c8316b173dda7683b772b98163117f33 682 Pfam PF00395 S-layer homology domain 515 558 0.0011 T 14-10-2018 IPR001119 S-layer homology domain MC28_G113 c8316b173dda7683b772b98163117f33 682 Gene3D G3DSA:3.40.710.10 61 405 5.1E-84 T 14-10-2018 MC28_G113 c8316b173dda7683b772b98163117f33 682 SUPERFAMILY SSF56601 71 392 2.4E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_G113 c8316b173dda7683b772b98163117f33 682 Pfam PF00144 Beta-lactamase 74 394 1.3E-61 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_0058 847c4bcb5d5a0ae49beedbcb93c7f7b1 449 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 112 268 5.7E-42 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_0058 847c4bcb5d5a0ae49beedbcb93c7f7b1 449 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 112 268 5.2E-36 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_0058 847c4bcb5d5a0ae49beedbcb93c7f7b1 449 Gene3D G3DSA:1.10.260.150 73 395 3.1E-79 T 14-10-2018 MC28_4519 ec1af6b91d29f5f133b467aeb12112a4 301 SUPERFAMILY SSF51261 105 215 6.8E-27 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_4519 ec1af6b91d29f5f133b467aeb12112a4 301 Pfam PF01551 Peptidase family M23 113 211 1.1E-22 T 14-10-2018 IPR016047 Peptidase M23 MC28_4519 ec1af6b91d29f5f133b467aeb12112a4 301 Gene3D G3DSA:2.70.70.10 70 227 5.8E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif MC28_0652 39750123fcddd41d4c0a441b2da8c981 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 284 3.8E-58 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 MC28_0652 39750123fcddd41d4c0a441b2da8c981 323 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site MC28_0652 39750123fcddd41d4c0a441b2da8c981 323 SUPERFAMILY SSF52283 3 136 5.29E-34 T 14-10-2018 MC28_0652 39750123fcddd41d4c0a441b2da8c981 323 Gene3D G3DSA:3.40.50.720 3 311 9.2E-118 T 14-10-2018 MC28_0652 39750123fcddd41d4c0a441b2da8c981 323 Gene3D G3DSA:3.40.50.720 96 285 9.2E-118 T 14-10-2018 MC28_0652 39750123fcddd41d4c0a441b2da8c981 323 SUPERFAMILY SSF51735 98 284 4.17E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0652 39750123fcddd41d4c0a441b2da8c981 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 316 1.2E-34 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 MC28_2738 6b0f8f4fc3e58a60b68f91e30a43ed5a 76 Gene3D G3DSA:1.10.3860.10 1 72 6.2E-11 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_2738 6b0f8f4fc3e58a60b68f91e30a43ed5a 76 Pfam PF00375 Sodium:dicarboxylate symporter family 4 52 9.2E-7 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 MC28_2738 6b0f8f4fc3e58a60b68f91e30a43ed5a 76 SUPERFAMILY SSF118215 3 54 1.16E-7 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 MC28_0071 50bf8390897c482567b253e737271da6 361 Gene3D G3DSA:2.40.100.10 243 361 1.6E-44 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_0071 50bf8390897c482567b253e737271da6 361 SUPERFAMILY SSF50891 246 360 2.84E-36 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_0071 50bf8390897c482567b253e737271da6 361 Gene3D G3DSA:3.20.20.70 1 242 2.2E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0071 50bf8390897c482567b253e737271da6 361 Pfam PF05913 Bacterial protein of unknown function (DUF871) 4 358 9.0E-141 T 14-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic MC28_0071 50bf8390897c482567b253e737271da6 361 SUPERFAMILY SSF51445 2 243 2.74E-92 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_G236 811267350fe15a79cf654b3bb9d12e36 612 Gene3D G3DSA:2.60.40.10 510 581 5.4E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_G236 811267350fe15a79cf654b3bb9d12e36 612 Gene3D G3DSA:2.60.40.10 429 501 1.8E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_G236 811267350fe15a79cf654b3bb9d12e36 612 Gene3D G3DSA:2.60.40.10 267 339 2.6E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_G236 811267350fe15a79cf654b3bb9d12e36 612 Gene3D G3DSA:2.60.40.10 348 420 2.8E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_4576 1e70676e6e2b906c729b8a641e6ddcdb 209 Gene3D G3DSA:1.10.357.10 61 205 6.4E-16 T 14-10-2018 MC28_4576 1e70676e6e2b906c729b8a641e6ddcdb 209 Gene3D G3DSA:1.10.10.60 17 59 3.7E-15 T 14-10-2018 MC28_4576 1e70676e6e2b906c729b8a641e6ddcdb 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_4576 1e70676e6e2b906c729b8a641e6ddcdb 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_4576 1e70676e6e2b906c729b8a641e6ddcdb 209 SUPERFAMILY SSF48498 92 203 4.6E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_4576 1e70676e6e2b906c729b8a641e6ddcdb 209 SUPERFAMILY SSF46689 18 88 4.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_4576 1e70676e6e2b906c729b8a641e6ddcdb 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 66 6.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_3656 9e93edbf00abe5fa2e588ba9794f71da 115 Gene3D G3DSA:1.25.40.20 1 112 2.3E-9 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily MC28_3656 9e93edbf00abe5fa2e588ba9794f71da 115 SUPERFAMILY SSF48403 3 98 6.53E-9 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily MC28_0426 f35d9436ffeac7b66e56c0e9fc789a3c 462 Gene3D G3DSA:2.40.300.10 308 452 1.7E-47 T 14-10-2018 MC28_0426 f35d9436ffeac7b66e56c0e9fc789a3c 462 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 264 453 2.3E-44 T 14-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain MC28_0426 f35d9436ffeac7b66e56c0e9fc789a3c 462 SUPERFAMILY SSF101967 148 280 1.09E-12 T 14-10-2018 MC28_0426 f35d9436ffeac7b66e56c0e9fc789a3c 462 Gene3D G3DSA:2.150.10.10 131 307 1.4E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal MC28_0426 f35d9436ffeac7b66e56c0e9fc789a3c 462 Gene3D G3DSA:4.10.80.40 362 397 1.7E-47 T 14-10-2018 MC28_2664 1a19b23039a7af08b25de567cba13f11 167 Gene3D G3DSA:3.40.630.30 1 165 4.8E-36 T 14-10-2018 MC28_2664 1a19b23039a7af08b25de567cba13f11 167 Pfam PF13302 Acetyltransferase (GNAT) domain 8 147 3.2E-22 T 14-10-2018 IPR000182 GNAT domain MC28_2664 1a19b23039a7af08b25de567cba13f11 167 SUPERFAMILY SSF55729 2 153 1.62E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4737 40a7558ebd2074e30bfb7f5becb79a97 166 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 46.681 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 MC28_4737 40a7558ebd2074e30bfb7f5becb79a97 166 Pfam PF14437 MafB19-like deaminase 5 151 5.1E-43 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 MC28_4737 40a7558ebd2074e30bfb7f5becb79a97 166 SUPERFAMILY SSF53927 3 155 2.06E-56 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 MC28_4737 40a7558ebd2074e30bfb7f5becb79a97 166 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 MC28_4737 40a7558ebd2074e30bfb7f5becb79a97 166 Gene3D G3DSA:3.40.140.10 1 166 2.7E-63 T 14-10-2018 MC28_5132 03d06996b385187a6ad23fc49270a7c5 138 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 129 6.9E-30 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I MC28_5132 03d06996b385187a6ad23fc49270a7c5 138 SUPERFAMILY SSF52788 1 132 1.83E-33 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily MC28_5132 03d06996b385187a6ad23fc49270a7c5 138 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 65 80 2.2E-6 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 MC28_5132 03d06996b385187a6ad23fc49270a7c5 138 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 105 120 2.2E-6 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 MC28_5132 03d06996b385187a6ad23fc49270a7c5 138 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 31 47 2.2E-6 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 MC28_5132 03d06996b385187a6ad23fc49270a7c5 138 SMART SM00226 1 131 9.1E-32 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I MC28_5132 03d06996b385187a6ad23fc49270a7c5 138 Gene3D G3DSA:3.40.50.2300 1 138 3.1E-44 T 14-10-2018 MC28_2688 dabdaa7ae00e3d09b6afd78923bfde9a 66 SUPERFAMILY SSF50249 1 64 7.46E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_2688 dabdaa7ae00e3d09b6afd78923bfde9a 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 5.1E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_2688 dabdaa7ae00e3d09b6afd78923bfde9a 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site MC28_2688 dabdaa7ae00e3d09b6afd78923bfde9a 66 PIRSF PIRSF002599 1 66 1.5E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 MC28_2688 dabdaa7ae00e3d09b6afd78923bfde9a 66 PRINTS PR00050 Cold shock protein signature 24 33 1.8E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_2688 dabdaa7ae00e3d09b6afd78923bfde9a 66 PRINTS PR00050 Cold shock protein signature 39 57 1.8E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_2688 dabdaa7ae00e3d09b6afd78923bfde9a 66 PRINTS PR00050 Cold shock protein signature 4 19 1.8E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MC28_2688 dabdaa7ae00e3d09b6afd78923bfde9a 66 SMART SM00357 3 66 1.1E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 MC28_2688 dabdaa7ae00e3d09b6afd78923bfde9a 66 Gene3D G3DSA:2.40.50.140 1 66 6.8E-31 T 14-10-2018 MC28_1478 b92a7d70cc8dbd067a9ecba35dd7d1a7 251 Pfam PF07070 SpoOM protein 2 211 1.6E-77 T 14-10-2018 IPR009776 Sporulation stage 0, protein M MC28_1457 96282a05b9f7d9711a7933bd5052fada 198 Gene3D G3DSA:3.40.630.30 34 170 4.3E-7 T 14-10-2018 MC28_1457 96282a05b9f7d9711a7933bd5052fada 198 SUPERFAMILY SSF55729 27 150 3.15E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1712 26a7321cc23098d3fb571af51f017f94 466 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 66 233 4.0E-42 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_1712 26a7321cc23098d3fb571af51f017f94 466 Gene3D G3DSA:1.20.1170.10 67 337 1.7E-71 T 14-10-2018 MC28_1712 26a7321cc23098d3fb571af51f017f94 466 Gene3D G3DSA:1.20.1170.10 339 466 7.9E-7 T 14-10-2018 MC28_1712 26a7321cc23098d3fb571af51f017f94 466 SUPERFAMILY SSF58100 47 294 2.88E-42 T 14-10-2018 MC28_0763 7494536eb54bb49cbd1cbb9afe40e9d6 213 Gene3D G3DSA:3.40.470.10 8 213 5.4E-50 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_0763 7494536eb54bb49cbd1cbb9afe40e9d6 213 SUPERFAMILY SSF52141 16 209 1.57E-41 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_0763 7494536eb54bb49cbd1cbb9afe40e9d6 213 SMART SM00986 25 204 1.1E-21 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_0763 7494536eb54bb49cbd1cbb9afe40e9d6 213 Pfam PF03167 Uracil DNA glycosylase superfamily 26 203 5.4E-40 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 MC28_0763 7494536eb54bb49cbd1cbb9afe40e9d6 213 SMART SM00987 25 204 1.1E-21 T 14-10-2018 MC28_1701 0ce248e29f54a5f7c5522ca6a21164df 219 SUPERFAMILY SSF51161 67 211 1.36E-41 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_1701 0ce248e29f54a5f7c5522ca6a21164df 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 MC28_1701 0ce248e29f54a5f7c5522ca6a21164df 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 4.7E-11 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_1701 0ce248e29f54a5f7c5522ca6a21164df 219 Gene3D G3DSA:2.160.10.10 3 218 2.4E-64 T 14-10-2018 MC28_B32 2344eeadd5fc71605361c6a12203e064 178 SUPERFAMILY SSF46955 14 122 2.56E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_B32 2344eeadd5fc71605361c6a12203e064 178 Pfam PF13152 Protein of unknown function (DUF3967) 139 176 2.5E-15 T 14-10-2018 IPR025052 Domain of unknown function DUF3967 MC28_B32 2344eeadd5fc71605361c6a12203e064 178 Gene3D G3DSA:1.10.1660.10 1 133 5.4E-10 T 14-10-2018 MC28_0197 bb4f624574309b42993fbc973bcaa985 41 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 10 33 7.6E-12 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_0197 bb4f624574309b42993fbc973bcaa985 41 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 12 35 4.4E-12 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_4616 39e86ca0ea45a1c2ff95ef32161f32e1 351 Gene3D G3DSA:1.10.3470.10 23 349 2.0E-89 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_4616 39e86ca0ea45a1c2ff95ef32161f32e1 351 Pfam PF01032 FecCD transport family 35 344 2.1E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_4616 39e86ca0ea45a1c2ff95ef32161f32e1 351 SUPERFAMILY SSF81345 22 344 1.96E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3536 a95d3c8f0f8976c031e98b80961e67db 231 Pfam PF12840 Helix-turn-helix domain 7 63 1.0E-6 T 14-10-2018 MC28_3536 a95d3c8f0f8976c031e98b80961e67db 231 SUPERFAMILY SSF46785 1 204 1.5E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3536 a95d3c8f0f8976c031e98b80961e67db 231 Gene3D G3DSA:1.10.10.10 1 93 6.6E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 1.4E-48 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 526 1.0E-39 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 SUPERFAMILY SSF52467 185 349 3.27E-46 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 SUPERFAMILY SSF52518 358 553 2.14E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 SUPERFAMILY SSF52518 3 170 1.66E-48 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 319 9.2E-35 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 Gene3D G3DSA:3.40.50.1220 182 335 5.3E-49 T 14-10-2018 MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 Gene3D G3DSA:3.40.50.970 3 180 1.3E-61 T 14-10-2018 MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 Gene3D G3DSA:3.40.50.970 348 564 1.8E-62 T 14-10-2018 MC28_1598 ff3de13ba0597cb8909d49f822aa6d5a 566 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 MC28_4090 ebc840f678b4f42d9a6a851a8caba504 134 Pfam PF03994 Domain of Unknown Function (DUF350) 12 65 6.0E-6 T 14-10-2018 IPR007140 Protein of unknown function DUF350 MC28_3630 ff3ad87f8328b79230b201417c26a579 254 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 1 251 38.728 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 MC28_3630 ff3ad87f8328b79230b201417c26a579 254 Pfam PF02666 Phosphatidylserine decarboxylase 51 248 2.9E-58 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 MC28_3630 ff3ad87f8328b79230b201417c26a579 254 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 39 249 1.3E-51 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 MC28_4908 ad390be0d837143177ca69ad623c5d1f 278 PIRSF PIRSF006483 1 278 2.8E-89 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_4908 ad390be0d837143177ca69ad623c5d1f 278 Gene3D G3DSA:3.30.70.120 189 265 2.0E-26 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MC28_4908 ad390be0d837143177ca69ad623c5d1f 278 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 213 1.2E-65 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_4908 ad390be0d837143177ca69ad623c5d1f 278 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 218 272 2.8E-23 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 MC28_2998 a22269d9d1a7a2ce06cc49a32cf9df1d 307 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 1 277 6.2E-40 T 14-10-2018 IPR006427 Phage portal protein, HK97 MC28_2998 a22269d9d1a7a2ce06cc49a32cf9df1d 307 Pfam PF04860 Phage portal protein 1 270 3.8E-28 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein MC28_0124 056d4504bcbc8a1917acf811bb97bcea 398 Pfam PF05975 Bacterial ABC transporter protein EcsB 5 379 2.5E-104 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 MC28_0124 056d4504bcbc8a1917acf811bb97bcea 398 PIRSF PIRSF037259 1 396 1.5E-118 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 MC28_C086 128a6098631f4629581264d955118742 189 Pfam PF11667 Putative zincin peptidase 65 168 3.7E-21 T 14-10-2018 IPR021683 Putative zincin peptidase MC28_C051 55a0023a8f724767e31cab57dcdc757c 512 Pfam PF01593 Flavin containing amine oxidoreductase 62 505 5.2E-61 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 MC28_C051 55a0023a8f724767e31cab57dcdc757c 512 Gene3D G3DSA:3.50.50.60 55 504 1.8E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_C051 55a0023a8f724767e31cab57dcdc757c 512 Gene3D G3DSA:1.10.405.10 157 250 1.8E-97 T 14-10-2018 MC28_C051 55a0023a8f724767e31cab57dcdc757c 512 PRINTS PR00757 Flavin-containing amine oxidase signature 486 503 1.6E-10 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_C051 55a0023a8f724767e31cab57dcdc757c 512 PRINTS PR00757 Flavin-containing amine oxidase signature 54 73 1.6E-10 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_C051 55a0023a8f724767e31cab57dcdc757c 512 PRINTS PR00757 Flavin-containing amine oxidase signature 455 477 1.6E-10 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 MC28_C051 55a0023a8f724767e31cab57dcdc757c 512 SUPERFAMILY SSF51905 51 508 1.97E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_C051 55a0023a8f724767e31cab57dcdc757c 512 SUPERFAMILY SSF54373 344 456 1.37E-13 T 14-10-2018 MC28_C051 55a0023a8f724767e31cab57dcdc757c 512 Gene3D G3DSA:3.90.660.10 90 454 1.8E-97 T 14-10-2018 MC28_0951 f6adeeb483493be6f2946d408bda3759 299 SUPERFAMILY SSF160240 215 286 9.81E-9 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 MC28_0951 f6adeeb483493be6f2946d408bda3759 299 Gene3D G3DSA:1.20.1510.10 12 209 4.2E-46 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily MC28_0951 f6adeeb483493be6f2946d408bda3759 299 SUPERFAMILY SSF161111 9 210 3.79E-58 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily MC28_0951 f6adeeb483493be6f2946d408bda3759 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 8.7E-92 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MC28_0951 f6adeeb483493be6f2946d408bda3759 299 Pfam PF01545 Cation efflux family 16 209 3.1E-51 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MC28_4750 a17e1f16feff893387d4ca6e28823c3c 87 Gene3D G3DSA:3.40.1440.10 1 87 1.5E-28 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 MC28_4750 a17e1f16feff893387d4ca6e28823c3c 87 SUPERFAMILY SSF82771 5 68 1.7E-10 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 MC28_4750 a17e1f16feff893387d4ca6e28823c3c 87 Pfam PF01541 GIY-YIG catalytic domain 3 68 4.7E-14 T 14-10-2018 IPR000305 GIY-YIG endonuclease MC28_2682 7145ec2ff2fa4641f2511fe90cffef23 303 Pfam PF04294 VanW like protein 172 299 3.7E-45 T 14-10-2018 IPR007391 Vancomycin resistance VanW MC28_0789 d360a353913858736cd917efd74d6cff 63 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 6 57 4.0E-7 T 14-10-2018 MC28_0789 d360a353913858736cd917efd74d6cff 63 Pfam PF14178 YppF-like protein 1 58 1.3E-27 T 14-10-2018 IPR025553 YppF-like protein MC28_C088 6394666fc3fab562676aa3d363b85e4a 63 TIGRFAM TIGR03949 bact_IIb_cerein: class IIb bacteriocin, lactobin A/cerein 7B family 16 59 2.9E-5 T 14-10-2018 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family MC28_F232 6624bff235d905730ced493a95a5ef02 98 SUPERFAMILY SSF111474 15 90 4.5E-5 T 14-10-2018 MC28_3023 1d0857f70d6c175de41a6afced736069 151 Pfam PF06114 IrrE N-terminal-like domain 27 137 5.9E-19 T 14-10-2018 IPR010359 IrrE N-terminal-like domain MC28_3023 1d0857f70d6c175de41a6afced736069 151 Gene3D G3DSA:3.40.390.50 2 111 1.9E-7 T 14-10-2018 MC28_2565 61f8b343a225348db46c6f0f9d983ae1 299 Pfam PF02567 Phenazine biosynthesis-like protein 9 294 1.9E-74 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 MC28_2565 61f8b343a225348db46c6f0f9d983ae1 299 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 296 6.1E-91 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 MC28_2565 61f8b343a225348db46c6f0f9d983ae1 299 SUPERFAMILY SSF54506 3 298 1.68E-62 T 14-10-2018 MC28_2565 61f8b343a225348db46c6f0f9d983ae1 299 Gene3D G3DSA:3.10.310.10 7 290 5.7E-78 T 14-10-2018 MC28_2565 61f8b343a225348db46c6f0f9d983ae1 299 Gene3D G3DSA:3.10.310.10 125 288 5.7E-78 T 14-10-2018 MC28_2565 61f8b343a225348db46c6f0f9d983ae1 299 PIRSF PIRSF016184 1 299 9.0E-80 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 MC28_0371 4179d0a2807a4c5a87e3fee0f0f2c732 184 Pfam PF10949 Protein of unknown function (DUF2777) 3 182 1.8E-70 T 14-10-2018 IPR024488 Protein of unknown function DUF2777 MC28_0371 4179d0a2807a4c5a87e3fee0f0f2c732 184 ProDom PD106196 YISN IG BH1722 3 177 3.0E-95 T 14-10-2018 IPR024488 Protein of unknown function DUF2777 MC28_0113 5826856115151110a6960bb3c5bcb53e 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.6E-23 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 MC28_0113 5826856115151110a6960bb3c5bcb53e 104 Gene3D G3DSA:1.10.3730.20 1 104 6.4E-19 T 14-10-2018 MC28_0113 5826856115151110a6960bb3c5bcb53e 104 SUPERFAMILY SSF103481 4 100 1.96E-14 T 14-10-2018 MC28_2244 182e5ce1863afc9438f4645b566b1334 311 SUPERFAMILY SSF53474 29 305 1.72E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_2244 182e5ce1863afc9438f4645b566b1334 311 Gene3D G3DSA:3.40.50.1820 28 308 3.0E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_G081 66b4e8671e884496877e54acaae3464a 355 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 106 2.1E-6 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 MC28_G081 66b4e8671e884496877e54acaae3464a 355 Gene3D G3DSA:3.40.50.720 1 109 9.5E-7 T 14-10-2018 MC28_G081 66b4e8671e884496877e54acaae3464a 355 SUPERFAMILY SSF51735 1 172 8.37E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_G081 66b4e8671e884496877e54acaae3464a 355 Gene3D G3DSA:3.30.360.10 116 328 4.0E-6 T 14-10-2018 MC28_0437 615cfdbdb2c9c60183147a201c3ab076 226 Gene3D G3DSA:3.90.550.10 6 226 6.4E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_0437 615cfdbdb2c9c60183147a201c3ab076 226 Pfam PF13712 Glycosyltransferase like family 8 219 1.7E-82 T 14-10-2018 MC28_0437 615cfdbdb2c9c60183147a201c3ab076 226 SUPERFAMILY SSF53448 10 215 1.05E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_0651 938f870fb9054f4cfddb7cc3eaf48aa6 55 Pfam PF13217 Protein of unknown function (DUF4025) 4 48 2.4E-15 T 14-10-2018 IPR025100 Protein of unknown function DUF4025 MC28_1877 11587d4cc1fdde86bc355c3a6f3b1c01 136 Pfam PF00293 NUDIX domain 7 103 1.8E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_1877 11587d4cc1fdde86bc355c3a6f3b1c01 136 ProSitePatterns PS00893 Nudix box signature. 22 43 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MC28_1877 11587d4cc1fdde86bc355c3a6f3b1c01 136 PRINTS PR00502 NUDIX hydrolase family signature 17 31 1.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_1877 11587d4cc1fdde86bc355c3a6f3b1c01 136 PRINTS PR00502 NUDIX hydrolase family signature 31 46 1.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_1877 11587d4cc1fdde86bc355c3a6f3b1c01 136 Gene3D G3DSA:3.90.79.10 1 126 8.7E-27 T 14-10-2018 MC28_1877 11587d4cc1fdde86bc355c3a6f3b1c01 136 SUPERFAMILY SSF55811 3 101 2.98E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_5435 b554c4bbabb0690c897d78f779aeec22 374 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 368 3.7E-110 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_5435 b554c4bbabb0690c897d78f779aeec22 374 Pfam PF03845 Spore germination protein 13 333 1.3E-58 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_1666 928293225f80cf619f40bacf1fb83f84 277 Pfam PF13120 Domain of unknown function (DUF3974) 1 126 1.8E-82 T 14-10-2018 IPR025005 Domain of unknown function DUF3974 MC28_4864 c063f5a1cce83cb6f4084ad97394c394 381 Pfam PF02595 Glycerate kinase family 3 374 1.7E-148 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 MC28_4864 c063f5a1cce83cb6f4084ad97394c394 381 Gene3D G3DSA:3.90.1510.10 42 276 1.4E-139 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 MC28_4864 c063f5a1cce83cb6f4084ad97394c394 381 PIRSF PIRSF006078 1 378 1.5E-140 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 MC28_4864 c063f5a1cce83cb6f4084ad97394c394 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.0E-160 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 MC28_4864 c063f5a1cce83cb6f4084ad97394c394 381 Gene3D G3DSA:3.40.50.10350 2 362 1.4E-139 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold MC28_4864 c063f5a1cce83cb6f4084ad97394c394 381 SUPERFAMILY SSF110738 2 375 8.63E-139 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 MC28_1293 9b988b22f7117a121c11a66b71aa5fe0 292 SUPERFAMILY SSF56112 3 274 4.49E-12 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_2988 3f330db18b561a3744581f38f24b9fac 1206 SUPERFAMILY SSF48371 617 921 1.15E-6 T 14-10-2018 IPR016024 Armadillo-type fold MC28_4236 022cab24f5a4ccb26e954a20a4cadd31 184 SUPERFAMILY SSF53254 1 173 4.93E-29 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_4236 022cab24f5a4ccb26e954a20a4cadd31 184 Gene3D G3DSA:3.40.50.1240 1 177 1.3E-25 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_4236 022cab24f5a4ccb26e954a20a4cadd31 184 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 170 2.4E-20 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_4236 022cab24f5a4ccb26e954a20a4cadd31 184 SMART SM00855 3 143 0.0085 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_3205 782cc59150515edfb24a8d9d29bdad70 391 SUPERFAMILY SSF47413 14 63 9.72E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2477 d3b398b9c92b53b048b6a127a99748be 350 Gene3D G3DSA:3.90.190.10 99 347 3.1E-60 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like MC28_2477 d3b398b9c92b53b048b6a127a99748be 350 Pfam PF13350 Tyrosine phosphatase family 98 348 1.1E-65 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type MC28_2477 d3b398b9c92b53b048b6a127a99748be 350 SUPERFAMILY SSF52799 98 347 7.21E-54 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like MC28_1768 e1474cb0c2ca0aa6bdd9675167782893 113 Gene3D G3DSA:1.10.10.10 2 110 8.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1768 e1474cb0c2ca0aa6bdd9675167782893 113 SUPERFAMILY SSF46785 5 103 4.54E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1768 e1474cb0c2ca0aa6bdd9675167782893 113 Pfam PF03551 Transcriptional regulator PadR-like family 15 86 3.9E-19 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_1223 90b1a8a87bcbf579e7ba118920a3b7f7 95 SUPERFAMILY SSF89447 1 51 5.76E-16 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily MC28_1223 90b1a8a87bcbf579e7ba118920a3b7f7 95 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 49 3.6E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_1223 90b1a8a87bcbf579e7ba118920a3b7f7 95 SMART SM00966 8 51 1.9E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_1223 90b1a8a87bcbf579e7ba118920a3b7f7 95 Gene3D G3DSA:2.10.260.10 1 54 5.7E-24 T 14-10-2018 MC28_1223 90b1a8a87bcbf579e7ba118920a3b7f7 95 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 7 48 1.7E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 MC28_1278 7d7483dc8584e689a2e2fdc8357a2989 384 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 173 377 3.6E-73 T 14-10-2018 IPR010897 Sporulation stage II, protein P MC28_1278 7d7483dc8584e689a2e2fdc8357a2989 384 SUPERFAMILY SSF53187 234 377 7.22E-11 T 14-10-2018 MC28_1278 7d7483dc8584e689a2e2fdc8357a2989 384 Gene3D G3DSA:3.40.630.40 211 380 2.4E-5 T 14-10-2018 MC28_1278 7d7483dc8584e689a2e2fdc8357a2989 384 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 97 372 1.2E-69 T 14-10-2018 IPR010897 Sporulation stage II, protein P MC28_2498 07255e679daf888a4d0bf87882efda3d 137 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 21 121 2.0E-43 T 14-10-2018 MC28_2498 07255e679daf888a4d0bf87882efda3d 137 Pfam PF03899 ATP synthase I chain 10 102 2.8E-11 T 14-10-2018 IPR005598 ATP synthase protein I MC28_2707 9a22ae68efea6d3b985b498563759853 141 Pfam PF02681 Divergent PAP2 family 6 135 1.1E-49 T 14-10-2018 IPR003832 Protein of unknown function DUF212 MC28_0189 7f5c503eaa8cfc67667f862d88eafe77 295 Pfam PF00892 EamA-like transporter family 6 136 2.5E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0189 7f5c503eaa8cfc67667f862d88eafe77 295 Pfam PF00892 EamA-like transporter family 146 277 1.0E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0189 7f5c503eaa8cfc67667f862d88eafe77 295 SUPERFAMILY SSF103481 186 278 2.22E-14 T 14-10-2018 MC28_0189 7f5c503eaa8cfc67667f862d88eafe77 295 SUPERFAMILY SSF103481 40 139 2.35E-10 T 14-10-2018 MC28_1997 cb717ac4645c296224c789e5769c1cc5 251 SUPERFAMILY SSF56601 7 242 2.82E-22 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1997 cb717ac4645c296224c789e5769c1cc5 251 Pfam PF13354 Beta-lactamase enzyme family 22 213 1.0E-14 T 14-10-2018 MC28_1997 cb717ac4645c296224c789e5769c1cc5 251 Gene3D G3DSA:3.40.710.10 2 245 1.0E-17 T 14-10-2018 MC28_G087 9cfc45a0556cb68a6ba47d4c49765fd0 190 Pfam PF07291 Methylamine utilisation protein MauE 7 135 9.7E-19 T 14-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 MC28_4463 d4225ac00f852c3883c614e575dfaae9 105 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 1 104 1.0E-51 T 14-10-2018 MC28_4463 d4225ac00f852c3883c614e575dfaae9 105 Pfam PF09685 Domain of unknown function (DUF4870) 6 98 1.0E-8 T 14-10-2018 IPR019109 Protein of unknown function DUF4870 MC28_4286 96ce9fa2ef9c4e669e470e4bb9a7c955 260 Pfam PF02096 60Kd inner membrane protein 61 248 1.8E-54 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 MC28_4286 96ce9fa2ef9c4e669e470e4bb9a7c955 260 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 60 247 6.5E-61 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4286 96ce9fa2ef9c4e669e470e4bb9a7c955 260 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 251 30.142 T 14-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 MC28_4286 96ce9fa2ef9c4e669e470e4bb9a7c955 260 PRINTS PR00701 60kDa inner membrane protein signature 128 151 2.0E-13 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 MC28_4286 96ce9fa2ef9c4e669e470e4bb9a7c955 260 PRINTS PR00701 60kDa inner membrane protein signature 214 237 2.0E-13 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 MC28_G107 9e3bca29c295b9465a5d43c147768aec 101 SUPERFAMILY SSF52038 8 88 9.16E-22 T 14-10-2018 IPR035905 Barstar-like superfamily MC28_G107 9e3bca29c295b9465a5d43c147768aec 101 Gene3D G3DSA:3.30.370.10 7 92 5.2E-21 T 14-10-2018 IPR035905 Barstar-like superfamily MC28_G107 9e3bca29c295b9465a5d43c147768aec 101 Pfam PF01337 Barstar (barnase inhibitor) 11 88 2.0E-17 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) MC28_G165 9676bcdc79050d371aa62051192faa6a 260 SMART SM00382 38 226 3.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_G165 9676bcdc79050d371aa62051192faa6a 260 SUPERFAMILY SSF52540 10 229 5.72E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G165 9676bcdc79050d371aa62051192faa6a 260 Pfam PF00005 ABC transporter 29 177 1.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_G165 9676bcdc79050d371aa62051192faa6a 260 Gene3D G3DSA:3.40.50.300 7 242 1.9E-67 T 14-10-2018 MC28_0664 bf100f9cb582bc46f89af8683c1cfbc7 250 SUPERFAMILY SSF53800 1 239 1.2E-43 T 14-10-2018 MC28_0664 bf100f9cb582bc46f89af8683c1cfbc7 250 Pfam PF01903 CbiX 132 231 7.5E-19 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 MC28_0664 bf100f9cb582bc46f89af8683c1cfbc7 250 Pfam PF01903 CbiX 9 110 1.0E-26 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 MC28_0664 bf100f9cb582bc46f89af8683c1cfbc7 250 Gene3D G3DSA:3.40.50.1400 122 239 7.4E-19 T 14-10-2018 MC28_0664 bf100f9cb582bc46f89af8683c1cfbc7 250 Gene3D G3DSA:3.40.50.1400 1 114 5.9E-22 T 14-10-2018 MC28_4530 2cffca0b03a8240fbf5ddd5e6794eda2 104 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 104 20.226 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MC28_4530 2cffca0b03a8240fbf5ddd5e6794eda2 104 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 99 1.3E-24 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like MC28_4680 ae3280f0c0cbeb01965e8e08ef923e94 314 Pfam PF13460 NAD(P)H-binding 32 183 6.7E-8 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_4680 ae3280f0c0cbeb01965e8e08ef923e94 314 Gene3D G3DSA:3.40.50.720 16 314 6.7E-32 T 14-10-2018 MC28_4680 ae3280f0c0cbeb01965e8e08ef923e94 314 SUPERFAMILY SSF51735 26 305 1.13E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4646 2d76d2431514aec0f9ffc152d374ff28 274 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 261 6.0E-88 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_4646 2d76d2431514aec0f9ffc152d374ff28 274 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 2.4E-92 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 MC28_4646 2d76d2431514aec0f9ffc152d374ff28 274 SUPERFAMILY SSF53613 4 265 8.73E-79 T 14-10-2018 IPR029056 Ribokinase-like MC28_4646 2d76d2431514aec0f9ffc152d374ff28 274 Gene3D G3DSA:3.40.1190.20 1 268 1.1E-90 T 14-10-2018 IPR029056 Ribokinase-like MC28_5058 b0fb653bb82f33bd241d67cd1eee98af 201 SUPERFAMILY SSF53335 4 117 1.22E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_5058 b0fb653bb82f33bd241d67cd1eee98af 201 Pfam PF13679 Methyltransferase domain 46 102 5.0E-8 T 14-10-2018 IPR025714 Methyltransferase domain MC28_5058 b0fb653bb82f33bd241d67cd1eee98af 201 Gene3D G3DSA:3.40.50.150 24 187 3.9E-15 T 14-10-2018 MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 PIRSF PIRSF000193 2 269 1.8E-86 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.1E-18 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 SUPERFAMILY SSF48179 161 269 2.04E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 1.5E-39 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.11 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 5.6E-87 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 Gene3D G3DSA:1.10.3730.10 164 271 2.9E-39 T 14-10-2018 MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 Gene3D G3DSA:3.40.50.720 1 163 5.2E-52 T 14-10-2018 MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 MC28_2181 9d1ce236ce6b5dabf8547a0fd601c69f 272 SUPERFAMILY SSF51735 3 160 7.99E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1945 60e38c8841a421fa0ec42cde51bc9ced 190 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 1 146 4.8E-49 T 14-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 MC28_1945 60e38c8841a421fa0ec42cde51bc9ced 190 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 17 144 1.7E-16 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like MC28_5234 6a5a7716eb3459a156c4dca1de8ffe1e 514 SUPERFAMILY SSF53448 3 163 6.88E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_5234 6a5a7716eb3459a156c4dca1de8ffe1e 514 Gene3D G3DSA:3.90.550.10 229 382 1.2E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_5234 6a5a7716eb3459a156c4dca1de8ffe1e 514 Pfam PF00535 Glycosyl transferase family 2 274 384 1.3E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_5234 6a5a7716eb3459a156c4dca1de8ffe1e 514 Pfam PF00535 Glycosyl transferase family 2 6 121 1.3E-17 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_5234 6a5a7716eb3459a156c4dca1de8ffe1e 514 Gene3D G3DSA:3.90.550.10 1 228 4.7E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_5234 6a5a7716eb3459a156c4dca1de8ffe1e 514 SUPERFAMILY SSF53448 272 430 1.43E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1670 7dff4f459a244397d24bfe4dff3f1a40 384 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 380 36.258 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 MC28_1670 7dff4f459a244397d24bfe4dff3f1a40 384 Gene3D G3DSA:3.30.420.40 149 340 4.9E-130 T 14-10-2018 MC28_1670 7dff4f459a244397d24bfe4dff3f1a40 384 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 2 378 5.4E-98 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 MC28_1670 7dff4f459a244397d24bfe4dff3f1a40 384 SUPERFAMILY SSF53067 1 340 7.34E-21 T 14-10-2018 MC28_1670 7dff4f459a244397d24bfe4dff3f1a40 384 Gene3D G3DSA:3.30.420.40 8 375 4.9E-130 T 14-10-2018 MC28_1155 c69e5b13fa60e44a43f08d752da9c7e2 317 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 61 296 1.6E-66 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MC28_1155 c69e5b13fa60e44a43f08d752da9c7e2 317 SUPERFAMILY SSF56601 10 313 9.63E-70 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1155 c69e5b13fa60e44a43f08d752da9c7e2 317 Gene3D G3DSA:3.40.710.10 40 314 1.7E-84 T 14-10-2018 MC28_1155 c69e5b13fa60e44a43f08d752da9c7e2 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 91 102 6.5E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_1155 c69e5b13fa60e44a43f08d752da9c7e2 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 171 184 6.5E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_1155 c69e5b13fa60e44a43f08d752da9c7e2 317 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 161 6.5E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_1301 f8597194556f2c3b032c2462bdc28295 161 SUPERFAMILY SSF55729 1 149 9.67E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1301 f8597194556f2c3b032c2462bdc28295 161 Pfam PF00583 Acetyltransferase (GNAT) family 43 137 1.0E-18 T 14-10-2018 IPR000182 GNAT domain MC28_1301 f8597194556f2c3b032c2462bdc28295 161 Gene3D G3DSA:3.40.630.30 1 160 3.2E-45 T 14-10-2018 MC28_5331 373c3fc995e3aa6c793261c5cdab72c0 329 Gene3D G3DSA:1.10.260.150 52 329 5.3E-88 T 14-10-2018 MC28_5331 373c3fc995e3aa6c793261c5cdab72c0 329 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 92 239 2.6E-45 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_5331 373c3fc995e3aa6c793261c5cdab72c0 329 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 92 240 1.2E-41 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_F221 452e6d98b4f80b2b3be8fe326c126116 97 Pfam PF01022 Bacterial regulatory protein, arsR family 26 66 1.4E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_F221 452e6d98b4f80b2b3be8fe326c126116 97 SMART SM00418 19 97 6.3E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_F221 452e6d98b4f80b2b3be8fe326c126116 97 Gene3D G3DSA:1.10.10.10 4 96 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F221 452e6d98b4f80b2b3be8fe326c126116 97 SUPERFAMILY SSF46785 10 95 1.28E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1267 c572b777a0832304abb6d694a2a1bae2 206 Pfam PF13460 NAD(P)H-binding 7 193 6.9E-42 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_1267 c572b777a0832304abb6d694a2a1bae2 206 SUPERFAMILY SSF51735 1 203 1.85E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_1267 c572b777a0832304abb6d694a2a1bae2 206 Gene3D G3DSA:3.40.50.720 1 206 4.1E-45 T 14-10-2018 MC28_2318 e1330f202fce5169ac53859aad69a4c0 362 Pfam PF03845 Spore germination protein 2 324 1.2E-60 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_2318 e1330f202fce5169ac53859aad69a4c0 362 PRINTS PR00342 Rhesus blood group protein signature 112 130 2.0E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 MC28_2318 e1330f202fce5169ac53859aad69a4c0 362 PRINTS PR00342 Rhesus blood group protein signature 226 242 2.0E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 MC28_2318 e1330f202fce5169ac53859aad69a4c0 362 PRINTS PR00342 Rhesus blood group protein signature 284 299 2.0E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 MC28_2318 e1330f202fce5169ac53859aad69a4c0 362 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 2 360 5.0E-66 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_5125 786b4304402010924e1b17a4a377d4bf 194 Pfam PF02342 TerD domain 3 189 3.8E-83 T 14-10-2018 IPR003325 TerD domain MC28_5125 786b4304402010924e1b17a4a377d4bf 194 Gene3D G3DSA:2.60.60.30 20 188 6.7E-71 T 14-10-2018 MC28_4167 c2893370abc5fc6f998569754e81cbe0 77 Pfam PF04070 Domain of unknown function (DUF378) 3 61 4.7E-26 T 14-10-2018 IPR007211 Protein of unknown function DUF378 MC28_2721 6e946314039d74074dc18000965eb74f 160 Pfam PF07849 Protein of unknown function (DUF1641) 118 155 4.0E-18 T 14-10-2018 IPR012440 Protein of unknown function DUF1641 MC28_3562 56c9094e18600089134afff7fbac0d08 288 SUPERFAMILY SSF161098 19 284 3.01E-38 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3562 56c9094e18600089134afff7fbac0d08 288 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 21 287 1.1E-78 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 MC28_3562 56c9094e18600089134afff7fbac0d08 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 284 1.7E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_3562 56c9094e18600089134afff7fbac0d08 288 Gene3D G3DSA:1.10.3720.10 61 288 3.7E-33 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0523 31371c8b2d12d48ddc09d9efe2733d60 200 Pfam PF07853 Protein of unknown function (DUF1648) 10 57 1.7E-14 T 14-10-2018 IPR012867 Domain of unknown function DUF1648 MC28_0870 402f1714b5c45760e128b1f704d80b8d 63 Gene3D G3DSA:1.20.58.990 10 63 3.2E-27 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_0870 402f1714b5c45760e128b1f704d80b8d 63 Pfam PF09388 Spo0E like sporulation regulatory protein 15 56 1.1E-12 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 MC28_0870 402f1714b5c45760e128b1f704d80b8d 63 SUPERFAMILY SSF140500 10 61 9.29E-15 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 MC28_1176 e20cb5471332f089e6ce9345b4f64f05 336 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 99 247 8.2E-38 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_1176 e20cb5471332f089e6ce9345b4f64f05 336 Gene3D G3DSA:1.10.260.150 58 336 1.0E-85 T 14-10-2018 MC28_1176 e20cb5471332f089e6ce9345b4f64f05 336 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 99 246 1.2E-42 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain MC28_3180 e8934c498d59dff585e98ae6d4374148 161 Gene3D G3DSA:1.20.140.160 16 148 1.0E-5 T 14-10-2018 MC28_3180 e8934c498d59dff585e98ae6d4374148 161 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 14 149 1.7E-51 T 14-10-2018 IPR006524 Transcription activator, ArpU family MC28_3180 e8934c498d59dff585e98ae6d4374148 161 SUPERFAMILY SSF88659 80 111 7.66E-5 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 SUPERFAMILY SSF50129 65 159 6.71E-35 T 14-10-2018 IPR011032 GroES-like superfamily MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 Pfam PF00166 Chaperonin 10 Kd subunit 68 159 2.5E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 ProSitePatterns PS00681 Chaperonins cpn10 signature. 68 92 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 SMART SM00883 67 159 6.2E-58 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 PRINTS PR00297 10kDa chaperonin signature 146 159 7.6E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 PRINTS PR00297 10kDa chaperonin signature 68 83 7.6E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 PRINTS PR00297 10kDa chaperonin signature 90 111 7.6E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 PRINTS PR00297 10kDa chaperonin signature 125 137 7.6E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 Hamap MF_00580 10 kDa chaperonin [groS]. 67 160 27.064 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MC28_4954 96e9f553edf8ec5f01fb8d6f92cccf80 160 Gene3D G3DSA:2.30.33.40 67 159 1.5E-37 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 MC28_1088 c3dc88ab1dcb2e89a5116a66a8acebd4 232 SUPERFAMILY SSF143548 32 149 3.4E-26 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 MC28_1088 c3dc88ab1dcb2e89a5116a66a8acebd4 232 Gene3D G3DSA:3.30.1330.90 26 152 1.7E-17 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 MC28_1088 c3dc88ab1dcb2e89a5116a66a8acebd4 232 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 15 169 7.9E-49 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 MC28_1088 c3dc88ab1dcb2e89a5116a66a8acebd4 232 Pfam PF03315 Serine dehydratase beta chain 18 98 2.6E-11 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 MC28_1088 c3dc88ab1dcb2e89a5116a66a8acebd4 232 PIRSF PIRSF036692 14 232 4.9E-57 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 MC28_3281 1a90717e621d5684fdab71edced49a77 285 Pfam PF00149 Calcineurin-like phosphoesterase 58 223 7.9E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_3281 1a90717e621d5684fdab71edced49a77 285 SUPERFAMILY SSF56300 58 283 6.87E-37 T 14-10-2018 MC28_3281 1a90717e621d5684fdab71edced49a77 285 Gene3D G3DSA:3.60.21.10 56 252 4.7E-27 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_F240 941ff7ee5b75920e8e3ac1d3623f75d8 93 Gene3D G3DSA:3.90.1720.10 33 85 2.6E-11 T 14-10-2018 MC28_F240 941ff7ee5b75920e8e3ac1d3623f75d8 93 SUPERFAMILY SSF54001 42 83 9.16E-10 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 SMART SM00382 325 510 6.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 SMART SM00382 31 223 2.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 Gene3D G3DSA:3.40.50.300 296 544 8.0E-65 T 14-10-2018 MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 SUPERFAMILY SSF52540 3 236 6.69E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 Gene3D G3DSA:3.40.50.300 2 263 3.1E-62 T 14-10-2018 MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 Pfam PF12558 ATP-binding cassette cobalt transporter 236 307 2.4E-15 T 14-10-2018 IPR022216 Putative ABC cobalt transporter MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 Pfam PF00005 ABC transporter 316 462 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 ProSitePatterns PS00211 ABC transporters family signature. 434 448 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 SUPERFAMILY SSF52540 289 530 5.33E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1844 3d7d5d6beba086a638bac59947c70c99 566 Pfam PF00005 ABC transporter 22 172 6.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_G406 e79391878918a229d25a5d93aae6e977 383 Pfam PF13271 Domain of unknown function (DUF4062) 5 87 5.5E-26 T 14-10-2018 IPR025139 Domain of unknown function DUF4062 MC28_1602 9c20e3b10d936e7ab488694951585793 200 Gene3D G3DSA:1.10.3800.10 31 171 4.8E-81 T 14-10-2018 MC28_1602 9c20e3b10d936e7ab488694951585793 200 Pfam PF10386 Protein of unknown function (DUF2441) 31 171 9.1E-61 T 14-10-2018 IPR018840 Protein of unknown function DUF2441 MC28_1602 9c20e3b10d936e7ab488694951585793 200 SUPERFAMILY SSF56399 3 195 2.88E-60 T 14-10-2018 MC28_1602 9c20e3b10d936e7ab488694951585793 200 Gene3D G3DSA:3.20.170.10 5 195 4.8E-81 T 14-10-2018 MC28_4130 91fd8ac59aab5f1a4ddf47ccd3611526 658 PIRSF PIRSF018968 1 656 6.2E-120 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_4130 91fd8ac59aab5f1a4ddf47ccd3611526 658 Pfam PF02687 FtsX-like permease family 87 173 9.1E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_5051 baccc72e1efc45112a0288e4a63ddbc3 172 Pfam PF07308 Protein of unknown function (DUF1456) 105 172 3.7E-22 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 MC28_5051 baccc72e1efc45112a0288e4a63ddbc3 172 Pfam PF07308 Protein of unknown function (DUF1456) 5 86 1.3E-26 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 MC28_2119 c0cf57ba34e4fa2fb7741113e3306604 54 SUPERFAMILY SSF109854 3 46 1.03E-9 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2119 c0cf57ba34e4fa2fb7741113e3306604 54 Gene3D G3DSA:1.20.120.450 1 49 7.3E-7 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1136 32e38426d8aa2000b8c70f0fdd5625be 405 Pfam PF13458 Periplasmic binding protein 39 377 6.3E-70 T 14-10-2018 IPR028081 Leucine-binding protein domain MC28_1136 32e38426d8aa2000b8c70f0fdd5625be 405 SUPERFAMILY SSF53822 39 385 1.36E-79 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_1136 32e38426d8aa2000b8c70f0fdd5625be 405 Gene3D G3DSA:3.40.50.2300 49 371 4.1E-112 T 14-10-2018 MC28_1136 32e38426d8aa2000b8c70f0fdd5625be 405 Gene3D G3DSA:3.40.50.2300 161 378 4.1E-112 T 14-10-2018 MC28_3483 05720bcf56a31b904b5b7be7f0e15311 92 Pfam PF06686 Stage III sporulation protein AC/AD protein family 33 86 3.5E-20 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family MC28_3483 05720bcf56a31b904b5b7be7f0e15311 92 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 1 89 4.5E-35 T 14-10-2018 IPR014211 Stage III sporulation protein AD MC28_4270 b428502d5b0486adb4ab289afe843e39 239 SMART SM00849 20 212 1.7E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_4270 b428502d5b0486adb4ab289afe843e39 239 Gene3D G3DSA:3.60.15.10 5 238 1.6E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_4270 b428502d5b0486adb4ab289afe843e39 239 SUPERFAMILY SSF56281 13 226 3.8E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_4270 b428502d5b0486adb4ab289afe843e39 239 Pfam PF00753 Metallo-beta-lactamase superfamily 18 212 9.0E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2775 908680d61f33cebe3cc3d4ed91a2502f 191 Gene3D G3DSA:1.10.1760.20 1 178 1.7E-50 T 14-10-2018 MC28_2775 908680d61f33cebe3cc3d4ed91a2502f 191 Pfam PF02632 BioY family 29 171 6.1E-36 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 MC28_2775 908680d61f33cebe3cc3d4ed91a2502f 191 PIRSF PIRSF016661 1 179 5.3E-48 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 PIRSF PIRSF001467 6 145 2.2E-40 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 Gene3D G3DSA:2.40.100.10 1 145 7.0E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 4.3E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 4.3E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 4.3E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 4.3E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 4.3E-27 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 SUPERFAMILY SSF50891 14 138 3.94E-46 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_3353 9c0978380ad96e30fb5c8099f364c727 145 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 138 5.1E-39 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 MC28_G079 61de5dd0381910148a096ab704f0f061 409 Pfam PF00155 Aminotransferase class I and II 45 389 2.5E-74 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_G079 61de5dd0381910148a096ab704f0f061 409 SUPERFAMILY SSF53383 2 394 1.32E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_G079 61de5dd0381910148a096ab704f0f061 409 Gene3D G3DSA:3.40.640.10 61 296 9.1E-156 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_G079 61de5dd0381910148a096ab704f0f061 409 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 2 400 2.3E-169 T 14-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 MC28_G079 61de5dd0381910148a096ab704f0f061 409 Gene3D G3DSA:3.90.1150.10 13 386 9.1E-156 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_G079 61de5dd0381910148a096ab704f0f061 409 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 243 252 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 MC28_4225 014ab18d4ccacc5c3bb38b5bcc487bdf 210 Pfam PF01022 Bacterial regulatory protein, arsR family 10 52 6.7E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_4225 014ab18d4ccacc5c3bb38b5bcc487bdf 210 Gene3D G3DSA:1.10.10.10 4 89 7.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4225 014ab18d4ccacc5c3bb38b5bcc487bdf 210 SUPERFAMILY SSF46785 7 188 9.12E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3264 8b107b6e2afeb4b5fcf2ddf86c600a3c 257 SUPERFAMILY SSF56784 1 252 2.84E-68 T 14-10-2018 IPR036412 HAD-like superfamily MC28_3264 8b107b6e2afeb4b5fcf2ddf86c600a3c 257 Gene3D G3DSA:3.30.1240.10 81 180 2.1E-85 T 14-10-2018 MC28_3264 8b107b6e2afeb4b5fcf2ddf86c600a3c 257 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 250 6.3E-65 T 14-10-2018 IPR000150 Cof family GO:0016787 MC28_3264 8b107b6e2afeb4b5fcf2ddf86c600a3c 257 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 250 1.3E-61 T 14-10-2018 MC28_3264 8b107b6e2afeb4b5fcf2ddf86c600a3c 257 ProSitePatterns PS01229 Hypothetical cof family signature 2. 205 227 - T 14-10-2018 MC28_3264 8b107b6e2afeb4b5fcf2ddf86c600a3c 257 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 224 6.3E-23 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 MC28_3264 8b107b6e2afeb4b5fcf2ddf86c600a3c 257 Gene3D G3DSA:3.40.50.1000 4 248 2.1E-85 T 14-10-2018 IPR023214 HAD superfamily MC28_4047 b88f1b722c474a0763c0e134ce6f1c17 177 Pfam PF01569 PAP2 superfamily 62 171 5.6E-23 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MC28_4047 b88f1b722c474a0763c0e134ce6f1c17 177 Gene3D G3DSA:1.20.144.10 92 177 3.9E-19 T 14-10-2018 MC28_4047 b88f1b722c474a0763c0e134ce6f1c17 177 SUPERFAMILY SSF48317 9 171 7.33E-41 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily MC28_4047 b88f1b722c474a0763c0e134ce6f1c17 177 SMART SM00014 61 169 1.9E-16 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MC28_4349 d7583786d6615519d178c51fe2a98ac3 321 Gene3D G3DSA:2.40.128.540 49 180 8.3E-59 T 14-10-2018 MC28_4349 d7583786d6615519d178c51fe2a98ac3 321 Pfam PF16103 Domain of unknown function (DUF4822) 197 319 4.4E-51 T 14-10-2018 IPR032247 Domain of unknown function DUF4822 MC28_4349 d7583786d6615519d178c51fe2a98ac3 321 Pfam PF16103 Domain of unknown function (DUF4822) 57 176 2.7E-53 T 14-10-2018 IPR032247 Domain of unknown function DUF4822 MC28_4349 d7583786d6615519d178c51fe2a98ac3 321 Gene3D G3DSA:2.40.128.540 181 321 3.5E-61 T 14-10-2018 MC28_B03 9758b0fc0af9dd14f42b5540614c84a4 328 Pfam PF05065 Phage capsid family 29 296 1.0E-6 T 14-10-2018 IPR024455 Phage capsid MC28_2872 a86364fc21ab916801f3a6861ffd1b20 1295 Pfam PF01391 Collagen triple helix repeat (20 copies) 1208 1266 3.0E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_2872 a86364fc21ab916801f3a6861ffd1b20 1295 Pfam PF01391 Collagen triple helix repeat (20 copies) 158 212 1.3E-7 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_0403 2033fb1169600de160f4bfb0330524ba 338 Gene3D G3DSA:1.10.3720.10 125 337 2.5E-26 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0403 2033fb1169600de160f4bfb0330524ba 338 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 84 2.9E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain MC28_0403 2033fb1169600de160f4bfb0330524ba 338 SUPERFAMILY SSF161098 129 318 2.62E-31 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0403 2033fb1169600de160f4bfb0330524ba 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 154 338 4.6E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_2389 ec0bd6085ec4daf1bec16a93586860e2 422 PIRSF PIRSF033563 8 422 9.5E-163 T 14-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 MC28_2389 ec0bd6085ec4daf1bec16a93586860e2 422 Pfam PF06245 Protein of unknown function (DUF1015) 11 419 7.1E-141 T 14-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 MC28_1696 464b00a48b1b328e1f92f65b24ed8f37 92 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 14 28 2.7E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1696 464b00a48b1b328e1f92f65b24ed8f37 92 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 28 44 2.7E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1696 464b00a48b1b328e1f92f65b24ed8f37 92 SUPERFAMILY SSF46894 10 75 6.46E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_1696 464b00a48b1b328e1f92f65b24ed8f37 92 Pfam PF00196 Bacterial regulatory proteins, luxR family 13 64 9.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_1696 464b00a48b1b328e1f92f65b24ed8f37 92 Gene3D G3DSA:1.10.10.10 10 74 1.8E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1696 464b00a48b1b328e1f92f65b24ed8f37 92 SMART SM00421 11 68 9.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MC28_0929 2050323ffb193e495d58a11c30cea3ec 206 SUPERFAMILY SSF48452 52 127 6.32E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0929 2050323ffb193e495d58a11c30cea3ec 206 Gene3D G3DSA:1.25.40.10 52 152 4.3E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0929 2050323ffb193e495d58a11c30cea3ec 206 Pfam PF14346 Domain of unknown function (DUF4398) 44 151 4.3E-14 T 14-10-2018 IPR025511 Domain of unknown function DUF4398 MC28_1300 f4e05b0f3975108a25fe2301bbc86ccd 186 Pfam PF13563 2'-5' RNA ligase superfamily 33 161 6.4E-13 T 14-10-2018 MC28_1300 f4e05b0f3975108a25fe2301bbc86ccd 186 SUPERFAMILY SSF55144 2 163 2.09E-16 T 14-10-2018 IPR009097 Cyclic phosphodiesterase MC28_1300 f4e05b0f3975108a25fe2301bbc86ccd 186 Gene3D G3DSA:3.90.1140.10 1 182 5.3E-18 T 14-10-2018 MC28_1664 4e2f307ab04b92cf512476ccec645b29 202 Pfam PF01596 O-methyltransferase 35 177 2.6E-25 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 MC28_1664 4e2f307ab04b92cf512476ccec645b29 202 SUPERFAMILY SSF53335 31 200 4.33E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1664 4e2f307ab04b92cf512476ccec645b29 202 Gene3D G3DSA:3.40.50.150 4 201 2.9E-45 T 14-10-2018 MC28_2229 e41b7c55cfaf606faaae112e724c76b1 462 Gene3D G3DSA:1.20.1440.30 167 318 3.8E-50 T 14-10-2018 MC28_2229 e41b7c55cfaf606faaae112e724c76b1 462 Pfam PF05139 Erythromycin esterase 94 455 9.7E-43 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 MC28_2229 e41b7c55cfaf606faaae112e724c76b1 462 Gene3D G3DSA:3.30.1870.10 96 166 3.8E-50 T 14-10-2018 MC28_2229 e41b7c55cfaf606faaae112e724c76b1 462 Gene3D G3DSA:3.40.1660.10 38 456 3.8E-50 T 14-10-2018 MC28_2229 e41b7c55cfaf606faaae112e724c76b1 462 SUPERFAMILY SSF159501 34 461 1.2E-95 T 14-10-2018 MC28_4911 ffa01a8a254254905dfc78d60546e708 256 Pfam PF01026 TatD related DNase 4 251 7.2E-46 T 14-10-2018 IPR001130 TatD family GO:0016788 MC28_4911 ffa01a8a254254905dfc78d60546e708 256 SUPERFAMILY SSF51556 3 253 5.96E-53 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_4911 ffa01a8a254254905dfc78d60546e708 256 Gene3D G3DSA:3.20.20.140 1 255 1.5E-58 T 14-10-2018 MC28_4911 ffa01a8a254254905dfc78d60546e708 256 PIRSF PIRSF005902 1 256 3.1E-58 T 14-10-2018 IPR001130 TatD family GO:0016788 MC28_2162 00f51dfd2c5f12866d6591724f09c2de 279 Pfam PF02653 Branched-chain amino acid transport system / permease component 2 261 1.4E-46 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 MC28_0513 744b1cc797b6b6606711d2410fc2e379 455 Pfam PF00171 Aldehyde dehydrogenase family 8 427 3.8E-89 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_0513 744b1cc797b6b6606711d2410fc2e379 455 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 236 247 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 MC28_0513 744b1cc797b6b6606711d2410fc2e379 455 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 208 215 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 MC28_0513 744b1cc797b6b6606711d2410fc2e379 455 PIRSF PIRSF036492 1 455 2.5E-185 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 MC28_0513 744b1cc797b6b6606711d2410fc2e379 455 Gene3D G3DSA:3.40.309.10 212 407 5.9E-174 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_0513 744b1cc797b6b6606711d2410fc2e379 455 Gene3D G3DSA:3.40.605.10 12 427 5.9E-174 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_0513 744b1cc797b6b6606711d2410fc2e379 455 SUPERFAMILY SSF53720 5 434 2.36E-122 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_1994 fd6e4a5e7f06372921af94ab8383602c 134 SUPERFAMILY SSF55729 14 124 3.95E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1994 fd6e4a5e7f06372921af94ab8383602c 134 Gene3D G3DSA:3.40.630.30 3 132 3.2E-29 T 14-10-2018 MC28_1994 fd6e4a5e7f06372921af94ab8383602c 134 Pfam PF00583 Acetyltransferase (GNAT) family 29 113 6.2E-10 T 14-10-2018 IPR000182 GNAT domain MC28_2024 4b5f02b5371053318d6ac27dd071973e 391 Gene3D G3DSA:3.30.9.10 85 329 3.2E-87 T 14-10-2018 MC28_2024 4b5f02b5371053318d6ac27dd071973e 391 Gene3D G3DSA:3.50.50.60 5 371 3.2E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2024 4b5f02b5371053318d6ac27dd071973e 391 SUPERFAMILY SSF51905 3 386 1.42E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2024 4b5f02b5371053318d6ac27dd071973e 391 SUPERFAMILY SSF54373 270 326 4.05E-11 T 14-10-2018 MC28_2024 4b5f02b5371053318d6ac27dd071973e 391 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 7.2E-8 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_2024 4b5f02b5371053318d6ac27dd071973e 391 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 7.2E-8 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_2024 4b5f02b5371053318d6ac27dd071973e 391 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 7.2E-8 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 MC28_2024 4b5f02b5371053318d6ac27dd071973e 391 Pfam PF01266 FAD dependent oxidoreductase 5 365 1.9E-66 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MC28_4380 073d88217a677236c88f6bfd836c6648 338 SUPERFAMILY SSF53901 56 286 7.61E-17 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 MC28_4380 073d88217a677236c88f6bfd836c6648 338 PIRSF PIRSF011570 1 335 4.6E-158 T 14-10-2018 IPR010894 Stage V sporulation AD MC28_4380 073d88217a677236c88f6bfd836c6648 338 Gene3D G3DSA:3.40.47.40 1 338 4.0E-148 T 14-10-2018 IPR038369 Stage V sporulation AD superfamily MC28_4380 073d88217a677236c88f6bfd836c6648 338 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 332 8.2E-156 T 14-10-2018 IPR010894 Stage V sporulation AD MC28_4380 073d88217a677236c88f6bfd836c6648 338 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 332 1.5E-160 T 14-10-2018 IPR010894 Stage V sporulation AD MC28_2966 6384fd5ad537773c0e7aba75d103c804 249 Pfam PF00574 Clp protease 46 222 5.2E-34 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MC28_2966 6384fd5ad537773c0e7aba75d103c804 249 SUPERFAMILY SSF52096 44 230 3.17E-36 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_2966 6384fd5ad537773c0e7aba75d103c804 249 Gene3D G3DSA:3.90.226.10 46 223 2.0E-29 T 14-10-2018 MC28_1110 c0afbda72dafd5586c86d787e6f8075a 440 SUPERFAMILY SSF159501 31 439 2.35E-109 T 14-10-2018 MC28_1110 c0afbda72dafd5586c86d787e6f8075a 440 Pfam PF05139 Erythromycin esterase 96 434 5.8E-64 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 MC28_1110 c0afbda72dafd5586c86d787e6f8075a 440 Gene3D G3DSA:1.20.1440.30 170 296 6.1E-138 T 14-10-2018 MC28_1110 c0afbda72dafd5586c86d787e6f8075a 440 PIRSF PIRSF036794 18 440 2.4E-146 T 14-10-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type MC28_1110 c0afbda72dafd5586c86d787e6f8075a 440 Gene3D G3DSA:3.30.1870.10 98 169 6.1E-138 T 14-10-2018 MC28_1110 c0afbda72dafd5586c86d787e6f8075a 440 Gene3D G3DSA:3.40.1660.10 40 436 6.1E-138 T 14-10-2018 MC28_4848 01af3b4a61a994c42ec31f1cbad3bf40 129 PIRSF PIRSF002131 1 129 4.2E-54 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 MC28_4848 01af3b4a61a994c42ec31f1cbad3bf40 129 SUPERFAMILY SSF53137 14 129 3.86E-50 T 14-10-2018 MC28_4848 01af3b4a61a994c42ec31f1cbad3bf40 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site MC28_4848 01af3b4a61a994c42ec31f1cbad3bf40 129 Pfam PF00411 Ribosomal protein S11 19 128 1.4E-51 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 MC28_4848 01af3b4a61a994c42ec31f1cbad3bf40 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.0E-59 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4848 01af3b4a61a994c42ec31f1cbad3bf40 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 34.407 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 MC28_4848 01af3b4a61a994c42ec31f1cbad3bf40 129 Gene3D G3DSA:3.30.420.80 1 129 1.8E-55 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_0705 a45b4028d80bf0bea6289fdc974140aa 201 Pfam PF07670 Nucleoside recognition 46 153 5.4E-10 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 MC28_B47 5e5303f507281a90ffacd21a016e1582 224 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 24 109 1.5E-24 T 14-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family MC28_B47 5e5303f507281a90ffacd21a016e1582 224 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 12 113 2.6E-30 T 14-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family MC28_B47 5e5303f507281a90ffacd21a016e1582 224 Pfam PF10552 ORF6C domain 123 221 2.4E-13 T 14-10-2018 IPR018878 ORF6C domain MC28_3151 16c5dd43df990eed91cb577d1d226343 181 Gene3D G3DSA:2.40.150.20 42 170 4.4E-5 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 MC28_D124 b4dce7a3627a9a1e474527d3ed833dd0 645 Gene3D G3DSA:3.40.50.300 214 373 1.6E-13 T 14-10-2018 MC28_D124 b4dce7a3627a9a1e474527d3ed833dd0 645 Gene3D G3DSA:3.40.50.300 423 645 5.0E-33 T 14-10-2018 MC28_D124 b4dce7a3627a9a1e474527d3ed833dd0 645 SUPERFAMILY SSF52540 201 625 2.68E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G339 8904b06ef6dd24e1f27a668f24667967 166 Gene3D G3DSA:1.10.10.10 81 160 1.8E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G339 8904b06ef6dd24e1f27a668f24667967 166 SUPERFAMILY SSF88659 88 159 1.1E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_G339 8904b06ef6dd24e1f27a668f24667967 166 Pfam PF08281 Sigma-70, region 4 102 149 1.8E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_G339 8904b06ef6dd24e1f27a668f24667967 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 156 2.1E-12 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_5253 cc5b8bc954440bdb9476645ba64d8b83 362 Pfam PF06081 Aromatic acid exporter family member 1 1 142 4.0E-45 T 14-10-2018 IPR010343 Aromatic acid exporter family member 1 MC28_3903 79782c082ebce51766ea91ac9533bfa5 140 SUPERFAMILY SSF54593 1 133 3.09E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3903 79782c082ebce51766ea91ac9533bfa5 140 Gene3D G3DSA:3.10.180.10 2 132 1.3E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3903 79782c082ebce51766ea91ac9533bfa5 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 9.4E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_2901 5aaf94dea00923aafd6391ed68d27d99 271 SUPERFAMILY SSF52540 2 229 2.92E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2901 5aaf94dea00923aafd6391ed68d27d99 271 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2901 5aaf94dea00923aafd6391ed68d27d99 271 Gene3D G3DSA:3.40.50.300 1 252 4.5E-68 T 14-10-2018 MC28_2901 5aaf94dea00923aafd6391ed68d27d99 271 SMART SM00382 26 215 1.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2901 5aaf94dea00923aafd6391ed68d27d99 271 Pfam PF00005 ABC transporter 18 165 1.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_5236 6006553037445eeafcbd9882adf09de3 243 Gene3D G3DSA:3.20.20.70 1 243 2.4E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_5236 6006553037445eeafcbd9882adf09de3 243 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 5 241 1.3E-104 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 MC28_5236 6006553037445eeafcbd9882adf09de3 243 Pfam PF13353 4Fe-4S single cluster domain 15 146 2.6E-23 T 14-10-2018 MC28_5236 6006553037445eeafcbd9882adf09de3 243 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 MC28_5236 6006553037445eeafcbd9882adf09de3 243 SUPERFAMILY SSF102114 21 222 5.49E-29 T 14-10-2018 MC28_5236 6006553037445eeafcbd9882adf09de3 243 Pfam PF04055 Radical SAM superfamily 23 184 1.7E-31 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 338 363 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 Gene3D G3DSA:1.20.1250.20 24 418 4.3E-63 T 14-10-2018 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 PRINTS PR01035 Tetracycline resistance protein signature 362 385 1.4E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 PRINTS PR01035 Tetracycline resistance protein signature 41 57 1.4E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 PRINTS PR01035 Tetracycline resistance protein signature 305 326 1.4E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 PRINTS PR01035 Tetracycline resistance protein signature 190 210 1.4E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 PRINTS PR01035 Tetracycline resistance protein signature 162 184 1.4E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 SUPERFAMILY SSF103473 30 419 5.49E-64 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 85 101 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 Pfam PF07690 Major Facilitator Superfamily 306 426 2.2E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1191 cbcfd64535a08ac6f7a9e80debf5f756 432 Pfam PF07690 Major Facilitator Superfamily 40 298 1.5E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_G402 18dbecee4f56f13d6c1c8b1bf7d55912 65 Gene3D G3DSA:1.10.150.130 2 38 1.4E-5 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_G402 18dbecee4f56f13d6c1c8b1bf7d55912 65 SUPERFAMILY SSF56349 3 65 6.94E-10 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_0485 356020932f450f7faa054373830038c0 71 SMART SM00530 4 59 1.9E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0485 356020932f450f7faa054373830038c0 71 Pfam PF01381 Helix-turn-helix 7 57 1.1E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0485 356020932f450f7faa054373830038c0 71 SUPERFAMILY SSF47413 2 63 2.55E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_0485 356020932f450f7faa054373830038c0 71 Gene3D G3DSA:1.10.260.40 1 65 1.6E-26 T 14-10-2018 MC28_D168 700ff2eefe81699446d8f8fbc4babdab 111 Pfam PF13700 Domain of unknown function (DUF4158) 2 89 1.5E-15 T 14-10-2018 IPR025296 Domain of unknown function DUF4158 MC28_0899 d9cd50121ad43a5f091c70911be38126 407 SUPERFAMILY SSF117143 94 365 3.14E-50 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like MC28_0899 d9cd50121ad43a5f091c70911be38126 407 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 388 2.4E-66 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G MC28_0899 d9cd50121ad43a5f091c70911be38126 407 Pfam PF00460 Flagella basal body rod protein 5 35 4.2E-10 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MC28_0899 d9cd50121ad43a5f091c70911be38126 407 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 328 405 9.8E-16 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MC28_0238 95c2c4a1fbe4524ba978a3b4ad271127 146 Pfam PF00210 Ferritin-like domain 9 140 1.8E-25 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 MC28_0238 95c2c4a1fbe4524ba978a3b4ad271127 146 Gene3D G3DSA:1.20.1260.10 1 146 6.6E-53 T 14-10-2018 IPR012347 Ferritin-like MC28_0238 95c2c4a1fbe4524ba978a3b4ad271127 146 SUPERFAMILY SSF47240 6 140 4.26E-29 T 14-10-2018 IPR009078 Ferritin-like superfamily MC28_5338 62ce4b9e432777dfb83373c11a5600ae 59 Pfam PF08141 Small acid-soluble spore protein H family 1 58 1.4E-23 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 MC28_5338 62ce4b9e432777dfb83373c11a5600ae 59 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 1 58 6.7E-28 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 MC28_5338 62ce4b9e432777dfb83373c11a5600ae 59 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 1 59 18.603 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 MC28_5338 62ce4b9e432777dfb83373c11a5600ae 59 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 58 2.0E-26 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 MC28_B72 b7f9562eb5e2994a12d164a3d804b075 502 PIRSF PIRSF019260 29 497 4.1E-53 T 14-10-2018 IPR016753 Phage portal protein PBSX family, Firmicutes MC28_B72 b7f9562eb5e2994a12d164a3d804b075 502 Pfam PF04860 Phage portal protein 77 435 1.5E-28 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein MC28_3955 73a4ccc7f79a3777e8bde55062871288 120 Pfam PF14119 Domain of unknown function (DUF4288) 1 97 3.4E-31 T 14-10-2018 IPR025630 Protein of unknown function DUF4288 MC28_E071 c2a564c1bae161757beb9d1a4c8a4a2a 463 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 58 169 2.2E-6 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_E071 c2a564c1bae161757beb9d1a4c8a4a2a 463 SUPERFAMILY SSF51695 16 321 1.26E-48 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_E071 c2a564c1bae161757beb9d1a4c8a4a2a 463 Gene3D G3DSA:2.80.10.50 326 452 1.7E-17 T 14-10-2018 MC28_E071 c2a564c1bae161757beb9d1a4c8a4a2a 463 Gene3D G3DSA:3.20.20.190 10 277 1.0E-62 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_E071 c2a564c1bae161757beb9d1a4c8a4a2a 463 SUPERFAMILY SSF50370 340 442 1.25E-13 T 14-10-2018 IPR035992 Ricin B-like lectins MC28_E071 c2a564c1bae161757beb9d1a4c8a4a2a 463 SMART SM00148 25 171 2.9E-7 T 14-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain MC28_4999 972a45fb00e4ab4c931562b9b1004135 310 Pfam PF00892 EamA-like transporter family 153 288 2.2E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_4999 972a45fb00e4ab4c931562b9b1004135 310 Pfam PF00892 EamA-like transporter family 6 140 1.5E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_4999 972a45fb00e4ab4c931562b9b1004135 310 SUPERFAMILY SSF103481 190 290 1.83E-14 T 14-10-2018 MC28_4999 972a45fb00e4ab4c931562b9b1004135 310 SUPERFAMILY SSF103481 41 144 1.06E-11 T 14-10-2018 MC28_4002 ae9e467bfd75c51cdae3038f4f715cc5 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 154 4.9E-65 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4002 ae9e467bfd75c51cdae3038f4f715cc5 161 Gene3D G3DSA:3.30.70.640 1 161 5.6E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4002 ae9e467bfd75c51cdae3038f4f715cc5 161 SUPERFAMILY SSF55040 11 157 7.85E-58 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4002 ae9e467bfd75c51cdae3038f4f715cc5 161 Pfam PF01967 MoaC family 15 152 2.9E-53 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_4002 ae9e467bfd75c51cdae3038f4f715cc5 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 160 35.771 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_2786 5cd1e0da21f755ed3f0c6fc818eca745 123 Gene3D G3DSA:3.10.180.10 9 123 4.5E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2786 5cd1e0da21f755ed3f0c6fc818eca745 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 118 2.1E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_2786 5cd1e0da21f755ed3f0c6fc818eca745 123 SUPERFAMILY SSF54593 5 122 3.22E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_3874 026cacb8f5d844db1392193b826e951b 346 Pfam PF01594 AI-2E family transporter 4 327 7.6E-69 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like MC28_3874 026cacb8f5d844db1392193b826e951b 346 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 3 331 1.0E-121 T 14-10-2018 IPR014227 Putative transport protein YtvI-like MC28_G118 9f2f2632a26ffa7a3ddc5b19ec54962d 200 SUPERFAMILY SSF140931 17 190 2.49E-39 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_G118 9f2f2632a26ffa7a3ddc5b19ec54962d 200 Pfam PF02661 Fic/DOC family 46 128 7.2E-11 T 14-10-2018 IPR003812 Fido domain MC28_G118 9f2f2632a26ffa7a3ddc5b19ec54962d 200 Gene3D G3DSA:1.10.3290.10 2 195 3.0E-66 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_0248 094c89e8516510094946b18d88abf1f8 337 SMART SM00829 13 327 5.7E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MC28_0248 094c89e8516510094946b18d88abf1f8 337 Pfam PF00107 Zinc-binding dehydrogenase 154 259 3.8E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MC28_0248 094c89e8516510094946b18d88abf1f8 337 Gene3D G3DSA:3.90.180.10 11 313 1.3E-110 T 14-10-2018 MC28_0248 094c89e8516510094946b18d88abf1f8 337 Gene3D G3DSA:3.40.50.720 138 263 1.3E-110 T 14-10-2018 MC28_0248 094c89e8516510094946b18d88abf1f8 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 1.4E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MC28_0248 094c89e8516510094946b18d88abf1f8 337 SUPERFAMILY SSF51735 115 295 1.28E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_0248 094c89e8516510094946b18d88abf1f8 337 SUPERFAMILY SSF50129 6 147 1.0E-31 T 14-10-2018 IPR011032 GroES-like superfamily MC28_E108 e593298199c8e7e812db91ad82640023 598 SMART SM00507 499 550 0.0013 T 14-10-2018 IPR003615 HNH nuclease MC28_E108 e593298199c8e7e812db91ad82640023 598 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 29 404 2.5E-100 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase MC28_E108 e593298199c8e7e812db91ad82640023 598 SUPERFAMILY SSF56672 38 402 8.78E-43 T 14-10-2018 MC28_E108 e593298199c8e7e812db91ad82640023 598 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 86 322 3.2E-40 T 14-10-2018 IPR000477 Reverse transcriptase domain MC28_5292 3bfcba484e84100c7256437dc690044d 458 Pfam PF13416 Bacterial extracellular solute-binding protein 67 390 5.2E-53 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein MC28_5292 3bfcba484e84100c7256437dc690044d 458 Gene3D G3DSA:3.40.190.10 52 404 2.4E-124 T 14-10-2018 MC28_5292 3bfcba484e84100c7256437dc690044d 458 SUPERFAMILY SSF53850 50 445 1.37E-82 T 14-10-2018 MC28_5292 3bfcba484e84100c7256437dc690044d 458 Gene3D G3DSA:3.40.190.10 164 443 2.4E-124 T 14-10-2018 MC28_5292 3bfcba484e84100c7256437dc690044d 458 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 159 176 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 MC28_0235 82d3a36296f54ed1dbec0776a8ec28ad 112 SUPERFAMILY SSF52091 6 107 1.26E-24 T 14-10-2018 IPR036513 STAS domain superfamily MC28_0235 82d3a36296f54ed1dbec0776a8ec28ad 112 Gene3D G3DSA:3.30.750.24 2 111 8.5E-27 T 14-10-2018 IPR036513 STAS domain superfamily MC28_0235 82d3a36296f54ed1dbec0776a8ec28ad 112 Pfam PF01740 STAS domain 15 102 5.4E-17 T 14-10-2018 IPR002645 STAS domain MC28_0235 82d3a36296f54ed1dbec0776a8ec28ad 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 106 8.0E-29 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 MC28_4624 bfa0e147d8c8f7d0ca144aa7abe04fd5 142 PIRSF PIRSF038931 1 141 6.0E-46 T 14-10-2018 IPR014099 Spore coat protein GerQ MC28_4624 bfa0e147d8c8f7d0ca144aa7abe04fd5 142 Pfam PF09671 Spore coat protein (Spore_GerQ) 56 130 2.0E-35 T 14-10-2018 IPR014099 Spore coat protein GerQ MC28_4624 bfa0e147d8c8f7d0ca144aa7abe04fd5 142 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 53 130 5.5E-35 T 14-10-2018 IPR014099 Spore coat protein GerQ MC28_4657 5b0cf32f3f85768fb9c8a45957718cc8 456 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 263 444 4.0E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4657 5b0cf32f3f85768fb9c8a45957718cc8 456 Gene3D G3DSA:1.10.287.950 199 455 2.0E-48 T 14-10-2018 MC28_4657 5b0cf32f3f85768fb9c8a45957718cc8 456 SUPERFAMILY SSF46458 45 201 2.21E-34 T 14-10-2018 IPR009050 Globin-like superfamily MC28_4657 5b0cf32f3f85768fb9c8a45957718cc8 456 SMART SM00283 218 451 1.1E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_4657 5b0cf32f3f85768fb9c8a45957718cc8 456 SUPERFAMILY SSF58104 224 448 5.49E-50 T 14-10-2018 MC28_4657 5b0cf32f3f85768fb9c8a45957718cc8 456 Gene3D G3DSA:1.10.490.10 48 198 3.7E-35 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 MC28_4657 5b0cf32f3f85768fb9c8a45957718cc8 456 Pfam PF11563 Protoglobin 55 209 5.0E-37 T 14-10-2018 MC28_4657 5b0cf32f3f85768fb9c8a45957718cc8 456 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 232 261 1.0E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_4657 5b0cf32f3f85768fb9c8a45957718cc8 456 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 345 374 1.0E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_4171 dca82a9376482f2bab24343c9da087bc 320 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 MC28_4171 dca82a9376482f2bab24343c9da087bc 320 SUPERFAMILY SSF51735 102 288 8.02E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4171 dca82a9376482f2bab24343c9da087bc 320 Gene3D G3DSA:3.40.50.720 97 287 1.8E-113 T 14-10-2018 MC28_4171 dca82a9376482f2bab24343c9da087bc 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.8E-64 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 MC28_4171 dca82a9376482f2bab24343c9da087bc 320 Gene3D G3DSA:3.40.50.720 4 314 1.8E-113 T 14-10-2018 MC28_4171 dca82a9376482f2bab24343c9da087bc 320 SUPERFAMILY SSF52283 2 132 2.55E-30 T 14-10-2018 MC28_4171 dca82a9376482f2bab24343c9da087bc 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 318 8.0E-29 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 MC28_3959 600ba1d0ebb1795f3cf2b147a06d9dbd 108 Pfam PF11009 Protein of unknown function (DUF2847) 5 103 1.8E-37 T 14-10-2018 IPR022551 Protein of unknown function DUF2847 MC28_3959 600ba1d0ebb1795f3cf2b147a06d9dbd 108 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 5 104 2.2E-39 T 14-10-2018 IPR022551 Protein of unknown function DUF2847 MC28_3959 600ba1d0ebb1795f3cf2b147a06d9dbd 108 Gene3D G3DSA:3.40.30.10 1 107 9.6E-40 T 14-10-2018 MC28_3959 600ba1d0ebb1795f3cf2b147a06d9dbd 108 SUPERFAMILY SSF52833 1 104 5.61E-9 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_C083 2529db5da244ec3610978d08915f9bca 485 SUPERFAMILY SSF53098 42 478 8.34E-78 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_C083 2529db5da244ec3610978d08915f9bca 485 Pfam PF01609 Transposase DDE domain 127 393 1.3E-44 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_0857 4e103fd2d5b45786f69c6ce42b558d6c 387 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 1.4E-75 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 MC28_0857 4e103fd2d5b45786f69c6ce42b558d6c 387 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 13 281 2.0E-78 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 MC28_0857 4e103fd2d5b45786f69c6ce42b558d6c 387 Gene3D G3DSA:1.20.1530.20 2 386 1.7E-106 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily MC28_2662 6597d70ca85f8b53c5229d327876cb7e 463 SUPERFAMILY SSF55103 220 457 2.13E-63 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 MC28_2662 6597d70ca85f8b53c5229d327876cb7e 463 Gene3D G3DSA:3.30.70.2740 336 417 5.9E-11 T 14-10-2018 MC28_2662 6597d70ca85f8b53c5229d327876cb7e 463 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 456 3.2E-57 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 MC28_2662 6597d70ca85f8b53c5229d327876cb7e 463 Gene3D G3DSA:1.10.45.10 418 457 1.6E-8 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 MC28_2662 6597d70ca85f8b53c5229d327876cb7e 463 Pfam PF01565 FAD binding domain 43 179 4.7E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 MC28_2662 6597d70ca85f8b53c5229d327876cb7e 463 SUPERFAMILY SSF56176 4 217 4.3E-65 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 MC28_2662 6597d70ca85f8b53c5229d327876cb7e 463 Gene3D G3DSA:3.30.465.40 5 237 7.7E-71 T 14-10-2018 MC28_3768 b7a1bce81b99aa0740f87be68377be3c 204 Pfam PF08000 Bacterial PH domain 11 131 9.9E-37 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain MC28_3768 b7a1bce81b99aa0740f87be68377be3c 204 Gene3D G3DSA:1.10.287.210 116 204 1.1E-36 T 14-10-2018 MC28_3768 b7a1bce81b99aa0740f87be68377be3c 204 SUPERFAMILY SSF50729 14 203 1.29E-67 T 14-10-2018 MC28_3768 b7a1bce81b99aa0740f87be68377be3c 204 Pfam PF11724 YvbH-like oligomerisation region 144 204 3.0E-27 T 14-10-2018 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain MC28_3768 b7a1bce81b99aa0740f87be68377be3c 204 Gene3D G3DSA:2.30.29.50 12 115 1.9E-45 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily MC28_4527 f94c26b785293000697a78a3ab422d88 466 Pfam PF00361 Proton-conducting membrane transporter 89 387 3.0E-70 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4527 f94c26b785293000697a78a3ab422d88 466 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 7 443 2.1E-110 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 MC28_4527 f94c26b785293000697a78a3ab422d88 466 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 1 445 16.302 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 MC28_3487 85d81859d78a69228c308cfde747a27d 93 ProDom PD064940 YQHV TRANSMEMBRANE MEMBRANE BH2798 12 89 5.0E-36 T 14-10-2018 IPR020390 Uncharacterised protein family YqhV MC28_3487 85d81859d78a69228c308cfde747a27d 93 Pfam PF10942 Protein of unknown function (DUF2619) 19 87 2.0E-27 T 14-10-2018 IPR020390 Uncharacterised protein family YqhV MC28_4245 4415bc47f2bacd5f473d6823d713fed3 406 Gene3D G3DSA:3.90.1150.10 6 395 7.8E-185 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_4245 4415bc47f2bacd5f473d6823d713fed3 406 SUPERFAMILY SSF53383 2 398 1.2E-133 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_4245 4415bc47f2bacd5f473d6823d713fed3 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MC28_4245 4415bc47f2bacd5f473d6823d713fed3 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 402 5.5E-192 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 MC28_4245 4415bc47f2bacd5f473d6823d713fed3 406 Pfam PF00266 Aminotransferase class-V 23 391 7.6E-164 T 14-10-2018 IPR000192 Aminotransferase class V domain MC28_4245 4415bc47f2bacd5f473d6823d713fed3 406 PIRSF PIRSF005572 20 404 4.7E-56 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 MC28_4245 4415bc47f2bacd5f473d6823d713fed3 406 Gene3D G3DSA:3.40.640.10 34 294 7.8E-185 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_D190 9378994957b1dc2b83cc9f13dc10a3c1 519 Pfam PF08708 Primase C terminal 1 (PriCT-1) 289 349 1.9E-11 T 14-10-2018 IPR014820 Primase, C-terminal 1 MC28_2533 be1995e8a7efdbd89ef4fa9a1d2a078d 146 Gene3D G3DSA:3.30.429.10 1 59 2.3E-16 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily MC28_2533 be1995e8a7efdbd89ef4fa9a1d2a078d 146 Gene3D G3DSA:3.30.429.10 79 144 2.6E-16 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily MC28_2533 be1995e8a7efdbd89ef4fa9a1d2a078d 146 SUPERFAMILY SSF55331 64 134 3.1E-13 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily MC28_2533 be1995e8a7efdbd89ef4fa9a1d2a078d 146 Pfam PF01361 Tautomerase enzyme 79 132 7.4E-6 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 MC28_2533 be1995e8a7efdbd89ef4fa9a1d2a078d 146 Pfam PF01361 Tautomerase enzyme 3 48 5.1E-8 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 MC28_2533 be1995e8a7efdbd89ef4fa9a1d2a078d 146 SUPERFAMILY SSF55331 2 61 1.83E-10 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily MC28_3976 fd471c8f74dbf87af6f1914629d07cd9 363 Pfam PF05343 M42 glutamyl aminopeptidase 52 343 3.5E-112 T 14-10-2018 IPR008007 Peptidase M42 MC28_3976 fd471c8f74dbf87af6f1914629d07cd9 363 SUPERFAMILY SSF53187 10 357 1.03E-70 T 14-10-2018 MC28_3976 fd471c8f74dbf87af6f1914629d07cd9 363 SUPERFAMILY SSF101821 77 186 4.12E-31 T 14-10-2018 MC28_3976 fd471c8f74dbf87af6f1914629d07cd9 363 PIRSF PIRSF001123 8 362 1.1E-152 T 14-10-2018 IPR008007 Peptidase M42 MC28_3976 fd471c8f74dbf87af6f1914629d07cd9 363 Gene3D G3DSA:2.40.30.40 81 168 1.9E-118 T 14-10-2018 IPR023367 Peptidase M42, domain 2 MC28_3976 fd471c8f74dbf87af6f1914629d07cd9 363 Gene3D G3DSA:3.40.630.10 17 346 1.9E-118 T 14-10-2018 MC28_5053 b9b044e0622bd7f5899113aaaffbcdfb 231 SUPERFAMILY SSF55729 19 166 3.67E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_5053 b9b044e0622bd7f5899113aaaffbcdfb 231 Gene3D G3DSA:3.40.630.30 18 199 2.3E-6 T 14-10-2018 MC28_2848 984a5120c2263e566f0f4708060f0191 320 Pfam PF02655 ATP-grasp domain 112 270 1.6E-22 T 14-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 MC28_2848 984a5120c2263e566f0f4708060f0191 320 Gene3D G3DSA:3.30.1490.20 134 179 9.9E-7 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 MC28_2848 984a5120c2263e566f0f4708060f0191 320 SUPERFAMILY SSF56059 114 296 1.55E-31 T 14-10-2018 MC28_2848 984a5120c2263e566f0f4708060f0191 320 Gene3D G3DSA:3.30.470.20 187 307 2.4E-39 T 14-10-2018 MC28_2848 984a5120c2263e566f0f4708060f0191 320 Gene3D G3DSA:3.40.50.20 1 116 4.3E-37 T 14-10-2018 MC28_1097 7b09103f1a9c6077be29718f34b9ed2b 93 SUPERFAMILY SSF53041 6 87 2.35E-17 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_1097 7b09103f1a9c6077be29718f34b9ed2b 93 Gene3D G3DSA:3.40.50.1390 2 78 5.7E-17 T 14-10-2018 MC28_1097 7b09103f1a9c6077be29718f34b9ed2b 93 Pfam PF00239 Resolvase, N terminal domain 7 88 1.4E-16 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_3113 6ea264594a4c35cc56d8b8e6a819b01e 427 Pfam PF00860 Permease family 16 389 4.6E-111 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 MC28_3113 6ea264594a4c35cc56d8b8e6a819b01e 427 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 16 412 5.7E-135 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 MC28_3113 6ea264594a4c35cc56d8b8e6a819b01e 427 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 335 355 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 MC28_4396 d4c6c0ce9f2d14c13e75fdcb958de83c 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 8 261 17.727 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 MC28_4396 d4c6c0ce9f2d14c13e75fdcb958de83c 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 260 2.2E-85 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 MC28_4396 d4c6c0ce9f2d14c13e75fdcb958de83c 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 137 149 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 MC28_4396 d4c6c0ce9f2d14c13e75fdcb958de83c 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 12 256 1.7E-78 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 MC28_0885 fe2d6f95ddf5ae6f758c8be43c550c03 287 Pfam PF00700 Bacterial flagellin C-terminal helical region 212 287 1.5E-5 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MC28_0885 fe2d6f95ddf5ae6f758c8be43c550c03 287 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 138 1.7E-9 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MC28_0885 fe2d6f95ddf5ae6f758c8be43c550c03 287 Gene3D G3DSA:1.20.1330.10 39 234 1.3E-39 T 14-10-2018 MC28_0885 fe2d6f95ddf5ae6f758c8be43c550c03 287 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 174 5.3E-47 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 MC28_0885 fe2d6f95ddf5ae6f758c8be43c550c03 287 SUPERFAMILY SSF64518 1 287 8.37E-47 T 14-10-2018 MC28_2638 247b1b115c9892b98d5bb6f726e6711a 348 SUPERFAMILY SSF55909 9 346 2.14E-100 T 14-10-2018 MC28_2638 247b1b115c9892b98d5bb6f726e6711a 348 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 11 345 6.8E-98 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 MC28_2638 247b1b115c9892b98d5bb6f726e6711a 348 Gene3D G3DSA:3.75.10.10 4 348 5.8E-109 T 14-10-2018 MC28_1455 96798e0ed26cf4baf095bfd04641dea3 605 SUPERFAMILY SSF52540 277 450 1.31E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1455 96798e0ed26cf4baf095bfd04641dea3 605 Gene3D G3DSA:3.40.50.300 263 447 8.1E-16 T 14-10-2018 MC28_1455 96798e0ed26cf4baf095bfd04641dea3 605 Pfam PF07728 AAA domain (dynein-related subfamily) 281 433 7.2E-8 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 MC28_4660 555d7b1fca520536aec3c058e73ce8e7 452 Pfam PF01943 Polysaccharide biosynthesis protein 1 239 7.8E-17 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 MC28_1285 f036a676d5c2afb406152d22f3482411 322 Gene3D G3DSA:3.30.479.30 48 180 2.3E-44 T 14-10-2018 MC28_1285 f036a676d5c2afb406152d22f3482411 322 SUPERFAMILY SSF117892 51 185 3.53E-40 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily MC28_1285 f036a676d5c2afb406152d22f3482411 322 SMART SM00244 20 178 2.5E-58 T 14-10-2018 IPR001107 Band 7 domain MC28_1285 f036a676d5c2afb406152d22f3482411 322 Pfam PF01145 SPFH domain / Band 7 family 24 194 4.3E-34 T 14-10-2018 IPR001107 Band 7 domain MC28_1285 f036a676d5c2afb406152d22f3482411 322 PRINTS PR00721 Stomatin signature 27 49 1.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 MC28_1285 f036a676d5c2afb406152d22f3482411 322 PRINTS PR00721 Stomatin signature 75 96 1.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 MC28_1285 f036a676d5c2afb406152d22f3482411 322 PRINTS PR00721 Stomatin signature 154 172 1.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 MC28_1285 f036a676d5c2afb406152d22f3482411 322 PRINTS PR00721 Stomatin signature 110 127 1.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 MC28_1285 f036a676d5c2afb406152d22f3482411 322 PRINTS PR00721 Stomatin signature 130 153 1.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 MC28_1285 f036a676d5c2afb406152d22f3482411 322 PRINTS PR00721 Stomatin signature 173 194 1.1E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 MC28_G285 7fcf331c707838ad9f489dbc2da8254b 76 Pfam PF01381 Helix-turn-helix 18 61 1.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_G285 7fcf331c707838ad9f489dbc2da8254b 76 SUPERFAMILY SSF47413 12 61 6.57E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 SUPERFAMILY SSF51306 27 175 1.05E-44 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 13 171 1.5E-47 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 ProSitePatterns PS00761 Signal peptidases I signature 3. 135 148 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 ProSitePatterns PS00501 Signal peptidases I serine active site. 37 44 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 ProSitePatterns PS00760 Signal peptidases I lysine active site. 78 90 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 130 149 7.5E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 7.5E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 76 88 7.5E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 Pfam PF00717 Peptidase S24-like 34 99 9.8E-17 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C MC28_5138 97dc0c27b462af272e5252e7fefb20a4 181 Gene3D G3DSA:2.10.109.10 37 169 4.4E-32 T 14-10-2018 MC28_4229 0014c542c61abed63a10f0bb2af4f916 165 Gene3D G3DSA:3.10.290.10 101 165 2.4E-12 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_4229 0014c542c61abed63a10f0bb2af4f916 165 SUPERFAMILY SSF55174 115 164 2.88E-8 T 14-10-2018 MC28_5360 44b74516a8e47f5b6c0555eaf21501df 503 PIRSF PIRSF005690 14 494 6.5E-169 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_5360 44b74516a8e47f5b6c0555eaf21501df 503 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 29 479 3.8E-171 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_G178 cab096ee79fe36f7dfb69c318631ae22 298 SUPERFAMILY SSF103481 39 138 4.58E-11 T 14-10-2018 MC28_G178 cab096ee79fe36f7dfb69c318631ae22 298 Pfam PF00892 EamA-like transporter family 5 135 2.6E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_G178 cab096ee79fe36f7dfb69c318631ae22 298 Pfam PF00892 EamA-like transporter family 144 276 1.7E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_G178 cab096ee79fe36f7dfb69c318631ae22 298 SUPERFAMILY SSF103481 186 277 8.11E-17 T 14-10-2018 MC28_G394 4a6b40579d8afb796c20ac5e0bc5f4bf 114 Gene3D G3DSA:2.160.20.10 2 110 2.6E-8 T 14-10-2018 IPR012334 Pectin lyase fold MC28_G394 4a6b40579d8afb796c20ac5e0bc5f4bf 114 SUPERFAMILY SSF51126 6 106 1.82E-11 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor MC28_2793 e5a0f852271a6a1073b4d5fa2d77043c 323 SUPERFAMILY SSF52768 29 313 4.68E-76 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily MC28_2793 e5a0f852271a6a1073b4d5fa2d77043c 323 Gene3D G3DSA:3.40.800.10 22 315 1.1E-94 T 14-10-2018 MC28_2793 e5a0f852271a6a1073b4d5fa2d77043c 323 PIRSF PIRSF036979 10 317 1.3E-61 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_2793 e5a0f852271a6a1073b4d5fa2d77043c 323 ProSitePatterns PS01053 Arginase family signature. 241 262 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 MC28_2793 e5a0f852271a6a1073b4d5fa2d77043c 323 PRINTS PR00116 Arginase signature 123 138 1.7E-10 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_2793 e5a0f852271a6a1073b4d5fa2d77043c 323 PRINTS PR00116 Arginase signature 273 287 1.7E-10 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_2793 e5a0f852271a6a1073b4d5fa2d77043c 323 PRINTS PR00116 Arginase signature 238 267 1.7E-10 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_2793 e5a0f852271a6a1073b4d5fa2d77043c 323 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 311 4.4E-86 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 MC28_2793 e5a0f852271a6a1073b4d5fa2d77043c 323 Pfam PF00491 Arginase family 37 311 1.6E-72 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 MC28_3399 698c3f3ee7b2ec2d637546c2a480a177 307 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 89 191 2.9E-9 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 MC28_3399 698c3f3ee7b2ec2d637546c2a480a177 307 Gene3D G3DSA:3.40.50.1820 53 307 1.2E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3399 698c3f3ee7b2ec2d637546c2a480a177 307 SUPERFAMILY SSF53474 20 305 5.56E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0101 dcd99c3f6aeab8088f9b9bd2374c547e 134 Pfam PF07681 DoxX 7 85 1.2E-19 T 14-10-2018 IPR032808 DoxX family MC28_D116 71849ff5e7eaba14fdd633dd8f773658 92 Pfam PF04956 TrbC/VIRB2 family 3 85 1.5E-13 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 MC28_1042 5081e3ae55da2bf94581bebab5d7f2fc 312 SUPERFAMILY SSF53474 5 310 1.11E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1042 5081e3ae55da2bf94581bebab5d7f2fc 312 Gene3D G3DSA:3.40.50.1820 3 311 1.4E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1042 5081e3ae55da2bf94581bebab5d7f2fc 312 Pfam PF12146 Serine aminopeptidase, S33 31 294 5.6E-51 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 MC28_1497 f594b7aa16d9ca60c394fd2d46e211e5 73 Gene3D G3DSA:3.30.40.30 1 57 7.3E-7 T 14-10-2018 IPR023118 YqaI domain superfamily MC28_E086 deff97a51e9277cb411ea79fa5c066a6 308 SUPERFAMILY SSF56973 70 284 1.83E-28 T 14-10-2018 MC28_E086 deff97a51e9277cb411ea79fa5c066a6 308 Pfam PF03318 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 82 292 6.0E-28 T 14-10-2018 IPR004991 Aerolysin-like toxin MC28_E086 deff97a51e9277cb411ea79fa5c066a6 308 Gene3D G3DSA:2.170.15.10 72 258 2.8E-36 T 14-10-2018 MC28_0900 da0918fddc18bd8334b1891fa9bda5db 111 Pfam PF13107 Protein of unknown function (DUF3964) 2 108 1.2E-58 T 14-10-2018 IPR025082 Protein of unknown function DUF3964 MC28_0903 22911c88ee56be57f5c54ac3da39d8c4 319 Gene3D G3DSA:1.20.120.1030 9 131 5.4E-55 T 14-10-2018 IPR038245 MogR, N-terminal domain superfamily MC28_0903 22911c88ee56be57f5c54ac3da39d8c4 319 Pfam PF12181 DNA binding domain of the motility gene repressor (MogR) 16 163 8.2E-80 T 14-10-2018 IPR021009 Motility repressor MogR, DNA-dinding domain MC28_F094 e8cd904b7749a5ad6c5ac9261dcc6faf 76 SUPERFAMILY SSF47413 13 62 2.38E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_F094 e8cd904b7749a5ad6c5ac9261dcc6faf 76 Gene3D G3DSA:1.10.260.40 10 74 1.2E-5 T 14-10-2018 MC28_0610 8a4da3bd79b184366d2a24aa7d609646 386 SUPERFAMILY SSF53187 9 385 1.16E-79 T 14-10-2018 MC28_0610 8a4da3bd79b184366d2a24aa7d609646 386 Gene3D G3DSA:3.40.630.10 12 369 2.1E-137 T 14-10-2018 MC28_0610 8a4da3bd79b184366d2a24aa7d609646 386 Pfam PF07687 Peptidase dimerisation domain 183 276 6.7E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain MC28_0610 8a4da3bd79b184366d2a24aa7d609646 386 PIRSF PIRSF005962 4 386 9.6E-129 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_0610 8a4da3bd79b184366d2a24aa7d609646 386 Gene3D G3DSA:3.30.70.360 178 292 2.1E-137 T 14-10-2018 MC28_0610 8a4da3bd79b184366d2a24aa7d609646 386 Pfam PF01546 Peptidase family M20/M25/M40 69 379 8.4E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 MC28_0610 8a4da3bd79b184366d2a24aa7d609646 386 SUPERFAMILY SSF55031 178 295 3.79E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain MC28_0610 8a4da3bd79b184366d2a24aa7d609646 386 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 11 371 1.4E-112 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 Pfam PF00117 Glutamine amidotransferase class-I 4 172 6.1E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 60 76 1.9E-8 T 14-10-2018 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 30 44 1.9E-8 T 14-10-2018 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00097 Anthranilate synthase component II signature 151 164 6.3E-26 T 14-10-2018 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00097 Anthranilate synthase component II signature 60 71 6.3E-26 T 14-10-2018 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00097 Anthranilate synthase component II signature 85 93 6.3E-26 T 14-10-2018 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00097 Anthranilate synthase component II signature 33 42 6.3E-26 T 14-10-2018 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00097 Anthranilate synthase component II signature 105 117 6.3E-26 T 14-10-2018 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 172 2.2E-60 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 Gene3D G3DSA:3.40.50.880 1 178 9.8E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 SUPERFAMILY SSF52317 2 173 5.43E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00096 Glutamine amidotransferase superfamily signature 151 164 1.5E-14 T 14-10-2018 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00096 Glutamine amidotransferase superfamily signature 33 42 1.5E-14 T 14-10-2018 MC28_0459 ebc7d460063484c6a5b25d4caafb0d45 181 PRINTS PR00096 Glutamine amidotransferase superfamily signature 60 71 1.5E-14 T 14-10-2018 MC28_3419 d06f4afaed009df2201825f28ef66996 186 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 19 171 1.7E-21 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 MC28_0541 763c5d4c650fb16c9968db0733d09e1f 179 Gene3D G3DSA:3.10.129.10 37 179 3.2E-46 T 14-10-2018 MC28_0541 763c5d4c650fb16c9968db0733d09e1f 179 SUPERFAMILY SSF54637 26 176 5.65E-40 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_0541 763c5d4c650fb16c9968db0733d09e1f 179 Pfam PF01575 MaoC like domain 57 158 3.9E-25 T 14-10-2018 IPR002539 MaoC-like dehydratase domain MC28_4771 227d7cc16dec2a94da3e531f89a57073 91 PIRSF PIRSF038881 1 88 1.9E-35 T 14-10-2018 IPR025490 RNA-binding protein, HP1423 type MC28_4771 227d7cc16dec2a94da3e531f89a57073 91 Gene3D G3DSA:3.10.290.10 1 90 4.8E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 MC28_4771 227d7cc16dec2a94da3e531f89a57073 91 SUPERFAMILY SSF55174 1 77 8.37E-20 T 14-10-2018 MC28_4771 227d7cc16dec2a94da3e531f89a57073 91 Pfam PF01479 S4 domain 1 46 7.8E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4771 227d7cc16dec2a94da3e531f89a57073 91 SMART SM00363 1 64 1.1E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_G031 b626dded14fd7d0278115e5bf8283c33 44 Pfam PF12323 Helix-turn-helix domain 2 23 7.5E-6 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain MC28_0402 3d888430faecd6880c6ffa9a344aa502 309 Gene3D G3DSA:1.10.3720.10 84 299 1.6E-19 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0402 3d888430faecd6880c6ffa9a344aa502 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 1.3E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0402 3d888430faecd6880c6ffa9a344aa502 309 SUPERFAMILY SSF161098 89 291 2.18E-16 T 14-10-2018 IPR035906 MetI-like superfamily MC28_1609 4028803bd94c68cb7b3f8e08a134344c 407 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 46 231 4.0E-65 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_1609 4028803bd94c68cb7b3f8e08a134344c 407 SUPERFAMILY SSF58100 38 401 9.94E-84 T 14-10-2018 MC28_1609 4028803bd94c68cb7b3f8e08a134344c 407 Gene3D G3DSA:1.20.1170.10 269 406 2.1E-29 T 14-10-2018 MC28_1609 4028803bd94c68cb7b3f8e08a134344c 407 Gene3D G3DSA:1.20.1170.10 42 268 1.3E-68 T 14-10-2018 MC28_3291 a6c897d591c991146d62196d39e8210b 513 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 491 1.2E-78 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 MC28_3291 a6c897d591c991146d62196d39e8210b 513 Gene3D G3DSA:1.20.1720.10 17 223 2.7E-53 T 14-10-2018 MC28_3291 a6c897d591c991146d62196d39e8210b 513 SUPERFAMILY SSF103473 12 498 1.7E-74 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_3291 a6c897d591c991146d62196d39e8210b 513 Pfam PF07690 Major Facilitator Superfamily 20 411 1.2E-52 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0648 7efefba5135c805057f1becd71b9d0f2 101 Gene3D G3DSA:3.10.20.400 1 88 2.7E-39 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 MC28_0648 7efefba5135c805057f1becd71b9d0f2 101 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 24 97 1.6E-35 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 MC28_0648 7efefba5135c805057f1becd71b9d0f2 101 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 1 101 28.728 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 MC28_0648 7efefba5135c805057f1becd71b9d0f2 101 SUPERFAMILY SSF141734 7 99 4.58E-45 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 MC28_0648 7efefba5135c805057f1becd71b9d0f2 101 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 47 101 2.0E-25 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 MC28_4778 4e88aabd678eb99eaf807f4268650a89 180 Pfam PF00156 Phosphoribosyl transferase domain 15 160 2.0E-25 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 MC28_4778 4e88aabd678eb99eaf807f4268650a89 180 SUPERFAMILY SSF53271 4 178 1.66E-60 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like MC28_4778 4e88aabd678eb99eaf807f4268650a89 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 174 4.4E-69 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 MC28_4778 4e88aabd678eb99eaf807f4268650a89 180 Gene3D G3DSA:3.40.50.2020 1 180 8.8E-68 T 14-10-2018 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 SMART SM00841 129 184 2.5E-34 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 SMART SM01185 67 121 1.4E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 1.8E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 SUPERFAMILY SSF50249 128 185 2.74E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 SUPERFAMILY SSF50104 1 63 3.07E-22 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 PIRSF PIRSF005901 1 185 6.8E-73 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.6E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 51.53 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 Gene3D G3DSA:2.40.50.140 128 185 1.1E-27 T 14-10-2018 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 Gene3D G3DSA:2.30.30.30 1 62 8.8E-32 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 4.2E-83 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 Gene3D G3DSA:2.40.50.140 64 127 2.4E-27 T 14-10-2018 MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.4E-28 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like MC28_3490 ba4a5cf2f60f3d0bc6f4c055f4189199 185 SUPERFAMILY SSF50249 65 129 4.71E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold MC28_2272 abb885a433f5b28800d1eb6c802da418 183 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 177 1.3E-51 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_2272 abb885a433f5b28800d1eb6c802da418 183 Gene3D G3DSA:2.10.109.10 59 182 2.3E-44 T 14-10-2018 MC28_2272 abb885a433f5b28800d1eb6c802da418 183 SUPERFAMILY SSF51306 27 182 3.27E-51 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily MC28_2272 abb885a433f5b28800d1eb6c802da418 183 ProSitePatterns PS00761 Signal peptidases I signature 3. 142 155 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 MC28_2272 abb885a433f5b28800d1eb6c802da418 183 ProSitePatterns PS00501 Signal peptidases I serine active site. 38 45 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 MC28_2272 abb885a433f5b28800d1eb6c802da418 183 Pfam PF00717 Peptidase S24-like 36 103 5.0E-18 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C MC28_2272 abb885a433f5b28800d1eb6c802da418 183 ProSitePatterns PS00760 Signal peptidases I lysine active site. 81 93 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 MC28_2272 abb885a433f5b28800d1eb6c802da418 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 4.9E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_2272 abb885a433f5b28800d1eb6c802da418 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 137 156 4.9E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_2272 abb885a433f5b28800d1eb6c802da418 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 91 4.9E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MC28_1600 63c06e32c08e1764816a4852e8346bb6 288 SUPERFAMILY SSF56281 24 242 9.3E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1600 63c06e32c08e1764816a4852e8346bb6 288 SMART SM00849 23 223 4.4E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_1600 63c06e32c08e1764816a4852e8346bb6 288 Pfam PF00753 Metallo-beta-lactamase superfamily 28 223 2.5E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_1600 63c06e32c08e1764816a4852e8346bb6 288 Gene3D G3DSA:3.60.15.10 2 244 3.7E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_G353 275a7df17d3cbadc2b435c51af34b747 794 SUPERFAMILY SSF58104 28 243 1.26E-5 T 14-10-2018 MC28_G353 275a7df17d3cbadc2b435c51af34b747 794 SUPERFAMILY SSF48371 177 622 5.04E-12 T 14-10-2018 IPR016024 Armadillo-type fold MC28_0487 30834814e3a9b67b52c8cf60c62aba6d 60 Pfam PF13121 Domain of unknown function (DUF3976) 17 56 9.7E-30 T 14-10-2018 IPR025008 Domain of unknown function DUF3976 MC28_0959 d3f14a899623e7f157f0774c99570ac3 219 Gene3D G3DSA:3.40.50.150 20 198 9.6E-20 T 14-10-2018 MC28_0959 d3f14a899623e7f157f0774c99570ac3 219 SUPERFAMILY SSF53335 25 192 8.31E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0959 d3f14a899623e7f157f0774c99570ac3 219 Pfam PF13578 Methyltransferase domain 45 161 5.9E-24 T 14-10-2018 MC28_1184 ebf83a166f6635be47471631758f3acf 602 Pfam PF06276 Ferric iron reductase FhuF-like transporter 419 579 4.9E-40 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain MC28_1184 ebf83a166f6635be47471631758f3acf 602 Gene3D G3DSA:1.10.510.40 403 551 1.4E-12 T 14-10-2018 MC28_1184 ebf83a166f6635be47471631758f3acf 602 Pfam PF04183 IucA / IucC family 153 387 7.9E-55 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 MC28_1345 7eb7d02d6e51a36831301f6a2b64d14c 337 Gene3D G3DSA:3.20.20.70 1 337 1.0E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_1345 7eb7d02d6e51a36831301f6a2b64d14c 337 Pfam PF04055 Radical SAM superfamily 19 182 5.8E-31 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 MC28_1345 7eb7d02d6e51a36831301f6a2b64d14c 337 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 337 5.7E-121 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_1345 7eb7d02d6e51a36831301f6a2b64d14c 337 Pfam PF13353 4Fe-4S single cluster domain 21 129 1.7E-7 T 14-10-2018 MC28_1345 7eb7d02d6e51a36831301f6a2b64d14c 337 SUPERFAMILY SSF102114 7 306 7.85E-80 T 14-10-2018 MC28_1345 7eb7d02d6e51a36831301f6a2b64d14c 337 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_1345 7eb7d02d6e51a36831301f6a2b64d14c 337 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 337 41.203 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_1345 7eb7d02d6e51a36831301f6a2b64d14c 337 SMART SM00729 14 225 1.9E-12 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 MC28_1345 7eb7d02d6e51a36831301f6a2b64d14c 337 Pfam PF06463 Molybdenum Cofactor Synthesis C 189 316 8.8E-37 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 MC28_1514 f23e8a7599d002e7dd2aef1a1a9c5b3e 155 Gene3D G3DSA:1.10.10.60 12 118 3.5E-5 T 14-10-2018 MC28_1514 f23e8a7599d002e7dd2aef1a1a9c5b3e 155 SUPERFAMILY SSF46689 21 80 1.25E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_3250 55daa2c13b76048d45c1a37da25c056c 42 Pfam PF13790 SR1 protein 1 38 3.6E-17 T 14-10-2018 IPR025236 SR1 protein MC28_2362 ae5820bca75c8ae93db709127622404b 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.3E-10 T 14-10-2018 MC28_2362 ae5820bca75c8ae93db709127622404b 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.3E-10 T 14-10-2018 MC28_2362 ae5820bca75c8ae93db709127622404b 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 304 328 1.3E-10 T 14-10-2018 MC28_2362 ae5820bca75c8ae93db709127622404b 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.3E-10 T 14-10-2018 MC28_2362 ae5820bca75c8ae93db709127622404b 492 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 449 1.1E-120 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 MC28_2362 ae5820bca75c8ae93db709127622404b 492 Gene3D G3DSA:1.20.1250.20 262 487 7.6E-23 T 14-10-2018 MC28_2362 ae5820bca75c8ae93db709127622404b 492 SUPERFAMILY SSF103473 7 479 5.49E-67 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2362 ae5820bca75c8ae93db709127622404b 492 Pfam PF07690 Major Facilitator Superfamily 18 411 6.4E-53 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2362 ae5820bca75c8ae93db709127622404b 492 Gene3D G3DSA:1.20.1720.10 14 248 2.1E-38 T 14-10-2018 MC28_4060 234a91454b93115d3cd695dd8c71bb3d 306 Gene3D G3DSA:3.40.1390.30 134 248 1.8E-25 T 14-10-2018 MC28_4060 234a91454b93115d3cd695dd8c71bb3d 306 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 54 292 2.6E-31 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 MC28_4060 234a91454b93115d3cd695dd8c71bb3d 306 SUPERFAMILY SSF102705 53 303 2.35E-39 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily MC28_4060 234a91454b93115d3cd695dd8c71bb3d 306 Gene3D G3DSA:3.40.1390.30 53 133 1.8E-25 T 14-10-2018 MC28_3381 006c02087c931d980b50c890857da5a3 288 Pfam PF13115 YtkA-like 77 159 1.8E-15 T 14-10-2018 IPR032693 YtkA-like domain MC28_3381 006c02087c931d980b50c890857da5a3 288 Pfam PF13115 YtkA-like 198 271 3.8E-10 T 14-10-2018 IPR032693 YtkA-like domain MC28_G067 d6b870c25d386beec57551f61089a927 253 Gene3D G3DSA:3.30.1140.50 65 236 1.0E-105 T 14-10-2018 MC28_G067 d6b870c25d386beec57551f61089a927 253 Gene3D G3DSA:2.60.40.3040 83 237 1.0E-105 T 14-10-2018 MC28_G067 d6b870c25d386beec57551f61089a927 253 Gene3D G3DSA:3.10.290.50 3 222 1.0E-105 T 14-10-2018 MC28_G067 d6b870c25d386beec57551f61089a927 253 SUPERFAMILY SSF56973 9 245 1.96E-15 T 14-10-2018 MC28_F114 8b759989b86cb8c9e2a012fccdddf147 83 Gene3D G3DSA:3.30.1340.10 2 83 1.8E-21 T 14-10-2018 IPR035895 HPr-like superfamily MC28_F114 8b759989b86cb8c9e2a012fccdddf147 83 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site MC28_F114 8b759989b86cb8c9e2a012fccdddf147 83 PRINTS PR00107 Phosphocarrier protein signature 39 54 2.7E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_F114 8b759989b86cb8c9e2a012fccdddf147 83 PRINTS PR00107 Phosphocarrier protein signature 14 30 2.7E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_F114 8b759989b86cb8c9e2a012fccdddf147 83 PRINTS PR00107 Phosphocarrier protein signature 54 71 2.7E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_F114 8b759989b86cb8c9e2a012fccdddf147 83 SUPERFAMILY SSF55594 4 81 1.03E-19 T 14-10-2018 IPR035895 HPr-like superfamily MC28_F114 8b759989b86cb8c9e2a012fccdddf147 83 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 76 1.4E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_F114 8b759989b86cb8c9e2a012fccdddf147 83 Pfam PF00381 PTS HPr component phosphorylation site 4 79 5.9E-20 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like MC28_0961 1f2f5c309c59e887dcd4d1aaf4ff7d7a 126 Pfam PF13411 MerR HTH family regulatory protein 3 69 5.2E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0961 1f2f5c309c59e887dcd4d1aaf4ff7d7a 126 Gene3D G3DSA:1.10.1660.10 1 117 1.5E-35 T 14-10-2018 MC28_0961 1f2f5c309c59e887dcd4d1aaf4ff7d7a 126 SMART SM00422 3 72 8.6E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0961 1f2f5c309c59e887dcd4d1aaf4ff7d7a 126 SUPERFAMILY SSF46955 3 117 4.4E-29 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_G313 8886fa5a4f90057d058500365ae3bb99 364 Gene3D G3DSA:1.25.40.10 4 364 1.6E-91 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_G313 8886fa5a4f90057d058500365ae3bb99 364 SUPERFAMILY SSF48452 100 279 3.29E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_1492 8b2f4818b430c885c296aa383edb422d 121 SMART SM00530 10 65 2.5E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1492 8b2f4818b430c885c296aa383edb422d 121 SUPERFAMILY SSF47413 4 71 5.09E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_1492 8b2f4818b430c885c296aa383edb422d 121 Gene3D G3DSA:1.10.260.40 8 121 4.7E-19 T 14-10-2018 MC28_1492 8b2f4818b430c885c296aa383edb422d 121 Pfam PF01381 Helix-turn-helix 11 65 9.0E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1901 37c82cbfda1c946fec8bdacad36d7e73 175 Gene3D G3DSA:3.40.630.30 1 170 2.1E-26 T 14-10-2018 MC28_1901 37c82cbfda1c946fec8bdacad36d7e73 175 Pfam PF13302 Acetyltransferase (GNAT) domain 4 143 2.5E-18 T 14-10-2018 IPR000182 GNAT domain MC28_1901 37c82cbfda1c946fec8bdacad36d7e73 175 SUPERFAMILY SSF55729 3 166 2.34E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_F098 9a53a799aab420c0a87dfadded9bce53 130 PIRSF PIRSF019455 1 130 1.2E-39 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 MC28_F098 9a53a799aab420c0a87dfadded9bce53 130 Pfam PF03965 Penicillinase repressor 7 121 3.4E-36 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 MC28_F098 9a53a799aab420c0a87dfadded9bce53 130 Gene3D G3DSA:1.10.10.10 6 73 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_F098 9a53a799aab420c0a87dfadded9bce53 130 Gene3D G3DSA:1.10.4040.10 74 125 1.6E-18 T 14-10-2018 MC28_F098 9a53a799aab420c0a87dfadded9bce53 130 SUPERFAMILY SSF46785 5 123 1.95E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1449 04ef05742b0be67a6f11e688f74e4429 382 SUPERFAMILY SSF103473 2 372 1.83E-35 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1449 04ef05742b0be67a6f11e688f74e4429 382 Pfam PF07690 Major Facilitator Superfamily 2 324 2.8E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1449 04ef05742b0be67a6f11e688f74e4429 382 Gene3D G3DSA:1.20.1250.20 1 365 5.4E-28 T 14-10-2018 MC28_1357 ba250c149ada6b74cf26fcd48b84471c 235 Gene3D G3DSA:1.20.120.520 70 235 1.1E-20 T 14-10-2018 MC28_1357 ba250c149ada6b74cf26fcd48b84471c 235 Pfam PF04405 Domain of Unknown function (DUF542) 9 61 3.8E-21 T 14-10-2018 IPR019903 Repair of iron centres family MC28_1357 ba250c149ada6b74cf26fcd48b84471c 235 Pfam PF01814 Hemerythrin HHE cation binding domain 84 231 8.6E-26 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 MC28_1357 ba250c149ada6b74cf26fcd48b84471c 235 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 11 231 3.0E-86 T 14-10-2018 IPR019903 Repair of iron centres family MC28_4345 38f3b5ef8a6342f7c0c43146e8450652 280 Pfam PF08378 Nuclease-related domain 2 117 4.0E-19 T 14-10-2018 IPR011528 Nuclease-related domain, NERD MC28_1817 79020d6c020fbb489f57e0ab7c793c90 407 SUPERFAMILY SSF56059 106 328 8.08E-32 T 14-10-2018 MC28_1817 79020d6c020fbb489f57e0ab7c793c90 407 Gene3D G3DSA:3.30.470.20 104 407 9.6E-57 T 14-10-2018 MC28_1817 79020d6c020fbb489f57e0ab7c793c90 407 Pfam PF13535 ATP-grasp domain 148 289 6.9E-17 T 14-10-2018 MC28_0184 03b46f3695b99e98bd82bc90cb8b0166 293 Pfam PF07261 Replication initiation and membrane attachment 177 245 6.4E-15 T 14-10-2018 IPR006343 DnaD domain MC28_0184 03b46f3695b99e98bd82bc90cb8b0166 293 SUPERFAMILY SSF158499 176 237 1.31E-15 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_0184 03b46f3695b99e98bd82bc90cb8b0166 293 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 177 245 2.2E-16 T 14-10-2018 IPR006343 DnaD domain MC28_0184 03b46f3695b99e98bd82bc90cb8b0166 293 Gene3D G3DSA:1.10.10.630 173 245 1.8E-18 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_1685 efd9df12d463d487a33c9c3ed158e643 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site MC28_1685 efd9df12d463d487a33c9c3ed158e643 160 SMART SM00347 29 129 4.5E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1685 efd9df12d463d487a33c9c3ed158e643 160 Pfam PF12802 MarR family 35 92 1.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1685 efd9df12d463d487a33c9c3ed158e643 160 Gene3D G3DSA:1.10.10.10 1 144 2.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1685 efd9df12d463d487a33c9c3ed158e643 160 SUPERFAMILY SSF46785 8 144 3.29E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1685 efd9df12d463d487a33c9c3ed158e643 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 9.7E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1685 efd9df12d463d487a33c9c3ed158e643 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 9.7E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5032 59c61e1c6028617c5d594a8a44f4f31e 159 Gene3D G3DSA:1.10.10.10 12 156 4.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5032 59c61e1c6028617c5d594a8a44f4f31e 159 SMART SM00347 21 123 1.6E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5032 59c61e1c6028617c5d594a8a44f4f31e 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5032 59c61e1c6028617c5d594a8a44f4f31e 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5032 59c61e1c6028617c5d594a8a44f4f31e 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5032 59c61e1c6028617c5d594a8a44f4f31e 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_5032 59c61e1c6028617c5d594a8a44f4f31e 159 SUPERFAMILY SSF46785 16 135 2.6E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5032 59c61e1c6028617c5d594a8a44f4f31e 159 Pfam PF01047 MarR family 30 88 1.3E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_3391 1a8307521d9436de03e610e285567060 174 Gene3D G3DSA:3.30.460.10 1 169 8.6E-57 T 14-10-2018 MC28_3391 1a8307521d9436de03e610e285567060 174 SUPERFAMILY SSF81301 5 168 2.29E-52 T 14-10-2018 MC28_3391 1a8307521d9436de03e610e285567060 174 Pfam PF04229 GrpB protein 4 162 2.2E-54 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase MC28_5049 721724d3d213af0257a7d2552151fc2b 336 SUPERFAMILY SSF51395 20 327 1.3E-59 T 14-10-2018 MC28_5049 721724d3d213af0257a7d2552151fc2b 336 Pfam PF01207 Dihydrouridine synthase (Dus) 22 324 5.6E-50 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 MC28_5049 721724d3d213af0257a7d2552151fc2b 336 Gene3D G3DSA:3.20.20.70 20 254 2.3E-61 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_5049 721724d3d213af0257a7d2552151fc2b 336 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 106 124 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 MC28_5049 721724d3d213af0257a7d2552151fc2b 336 PIRSF PIRSF006621 8 334 2.0E-83 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 MC28_0260 00de10147d3af11c05165d80711268ec 330 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 269 2.6E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_0260 00de10147d3af11c05165d80711268ec 330 Gene3D G3DSA:3.10.180.10 10 314 8.4E-109 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0260 00de10147d3af11c05165d80711268ec 330 SUPERFAMILY SSF54593 6 308 5.87E-46 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0260 00de10147d3af11c05165d80711268ec 330 Gene3D G3DSA:3.10.180.10 71 222 8.4E-109 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_1310 b6dcd4d27c3e702baa777e7ab0bda2b3 251 Pfam PF13130 Domain of unknown function (DUF3952) 3 99 4.0E-52 T 14-10-2018 IPR025019 Domain of unknown function DUF3952 MC28_2073 ea60e1ffe92143d70477cdc0cadbdb26 204 Pfam PF14172 Domain of unknown function (DUF4309) 67 193 2.8E-43 T 14-10-2018 IPR025453 Protein of unknown function DUF4309 MC28_2505 7ca8dedc654674c7e69ae1cd9b4ff62c 262 Pfam PF13704 Glycosyl transferase family 2 19 105 2.0E-10 T 14-10-2018 MC28_0723 9d72ad6190b12f365b70cd51c13867c0 296 SUPERFAMILY SSF46955 13 89 1.14E-15 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_0723 9d72ad6190b12f365b70cd51c13867c0 296 SMART SM00422 13 82 3.3E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0723 9d72ad6190b12f365b70cd51c13867c0 296 Pfam PF13411 MerR HTH family regulatory protein 13 80 6.1E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0723 9d72ad6190b12f365b70cd51c13867c0 296 Gene3D G3DSA:1.10.1660.10 8 80 3.9E-23 T 14-10-2018 MC28_5137 3ea59cfeb36f2474c7ba7ba001687135 220 Pfam PF07947 YhhN family 45 216 1.8E-27 T 14-10-2018 IPR012506 YhhN-like GO:0016021 MC28_1652 fdf2bd19e3c44fc470efd8a61882aa94 194 Pfam PF01810 LysE type translocator 13 193 1.8E-14 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 MC28_1051 289beb0b8d143ce18d1c0e67aa77c1af 243 SUPERFAMILY SSF52172 11 142 3.27E-42 T 14-10-2018 IPR011006 CheY-like superfamily MC28_1051 289beb0b8d143ce18d1c0e67aa77c1af 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 241 6.7E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1051 289beb0b8d143ce18d1c0e67aa77c1af 243 Gene3D G3DSA:1.10.10.10 140 243 2.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1051 289beb0b8d143ce18d1c0e67aa77c1af 243 Gene3D G3DSA:3.40.50.2300 8 133 2.4E-38 T 14-10-2018 MC28_1051 289beb0b8d143ce18d1c0e67aa77c1af 243 SMART SM00862 165 241 3.2E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1051 289beb0b8d143ce18d1c0e67aa77c1af 243 SMART SM00448 15 125 8.6E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1051 289beb0b8d143ce18d1c0e67aa77c1af 243 SUPERFAMILY SSF46894 145 241 6.24E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_1051 289beb0b8d143ce18d1c0e67aa77c1af 243 Pfam PF00072 Response regulator receiver domain 17 125 1.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_2380 7b04f07d5a635ee515954361861c8597 156 SUPERFAMILY SSF109854 19 151 1.08E-15 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2380 7b04f07d5a635ee515954361861c8597 156 Pfam PF12867 DinB superfamily 25 131 2.7E-8 T 14-10-2018 IPR024775 DinB-like domain MC28_2380 7b04f07d5a635ee515954361861c8597 156 Gene3D G3DSA:1.20.120.450 19 150 4.0E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1959 cdb7e74eb7ce6c17284421e364b16054 198 SUPERFAMILY SSF55729 14 182 1.19E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1959 cdb7e74eb7ce6c17284421e364b16054 198 Gene3D G3DSA:3.40.630.30 14 179 5.2E-36 T 14-10-2018 MC28_1959 cdb7e74eb7ce6c17284421e364b16054 198 Pfam PF00583 Acetyltransferase (GNAT) family 65 153 7.4E-13 T 14-10-2018 IPR000182 GNAT domain MC28_2997 131132329adcc099cd9107f30f948f57 260 Pfam PF00574 Clp protease 39 174 2.7E-29 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MC28_2997 131132329adcc099cd9107f30f948f57 260 Gene3D G3DSA:3.90.226.10 6 190 3.1E-45 T 14-10-2018 MC28_2997 131132329adcc099cd9107f30f948f57 260 SUPERFAMILY SSF52096 16 177 1.87E-43 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_2997 131132329adcc099cd9107f30f948f57 260 PRINTS PR00127 Clp protease catalytic subunit P signature 75 92 2.4E-7 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_2997 131132329adcc099cd9107f30f948f57 260 PRINTS PR00127 Clp protease catalytic subunit P signature 151 170 2.4E-7 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_2997 131132329adcc099cd9107f30f948f57 260 PRINTS PR00127 Clp protease catalytic subunit P signature 44 64 2.4E-7 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MC28_1228 32bf650c6765c95579b5c05fff10b15e 134 Pfam PF14074 Protein of unknown function (DUF4257) 25 105 7.6E-32 T 14-10-2018 IPR025353 Protein of unknown function DUF4257) MC28_1228 32bf650c6765c95579b5c05fff10b15e 134 ProDom PD866859 YTVB PLASMID MEMBRANE TRANSMEMBRANE 22 124 3.0E-53 T 14-10-2018 MC28_5073 ee8e9c44b462c1fb7ba21a454eb025b2 421 Gene3D G3DSA:3.30.360.10 176 360 6.2E-11 T 14-10-2018 MC28_5073 ee8e9c44b462c1fb7ba21a454eb025b2 421 Gene3D G3DSA:3.40.50.720 60 361 6.2E-11 T 14-10-2018 MC28_1422 6feab4d6969a6444c04549b5e8fd0190 326 SUPERFAMILY SSF56281 54 283 1.17E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1422 6feab4d6969a6444c04549b5e8fd0190 326 Gene3D G3DSA:3.60.15.10 34 325 7.4E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_1422 6feab4d6969a6444c04549b5e8fd0190 326 PIRSF PIRSF038896 1 311 6.3E-92 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 MC28_1422 6feab4d6969a6444c04549b5e8fd0190 326 Pfam PF12706 Beta-lactamase superfamily domain 76 266 6.4E-40 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_0131 e02abbdf237ff4b6cc061d636c371fd9 265 Gene3D G3DSA:3.40.190.10 126 223 3.0E-72 T 14-10-2018 MC28_0131 e02abbdf237ff4b6cc061d636c371fd9 265 SMART SM00062 43 262 5.3E-73 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_0131 e02abbdf237ff4b6cc061d636c371fd9 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 1.1E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MC28_0131 e02abbdf237ff4b6cc061d636c371fd9 265 SUPERFAMILY SSF53850 1 262 1.47E-68 T 14-10-2018 MC28_0131 e02abbdf237ff4b6cc061d636c371fd9 265 SMART SM00079 43 261 0.0013 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 MC28_0131 e02abbdf237ff4b6cc061d636c371fd9 265 Gene3D G3DSA:3.40.190.10 42 254 3.0E-72 T 14-10-2018 MC28_0131 e02abbdf237ff4b6cc061d636c371fd9 265 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 66 79 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site MC28_3481 e3b66a64e6cdf647ba2dee48d1a1cbfb 191 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 1 92 4.9E-27 T 14-10-2018 IPR014245 Sporulation stage III, protein AF MC28_3481 e3b66a64e6cdf647ba2dee48d1a1cbfb 191 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 2 180 2.6E-30 T 14-10-2018 IPR014245 Sporulation stage III, protein AF MC28_4340 32be2ee2b3f9e22c689b57425416eadd 84 Pfam PF13127 Protein of unknown function (DUF3955) 18 76 7.7E-18 T 14-10-2018 IPR025016 Protein of unknown function DUF3955 MC28_D039 3175849a274b9fd9fb1df85d60a6d472 142 Pfam PF17633 Family of unknown function (DUF5514) 1 142 2.2E-87 T 14-10-2018 IPR035115 Protein of unknown function DUF5514 MC28_D039 3175849a274b9fd9fb1df85d60a6d472 142 ProDom PD299256 PLASMID PXO2-83/BXB0113/GBAA_PXO2_0113 1 142 5.0E-67 T 14-10-2018 IPR035115 Protein of unknown function DUF5514 MC28_2296 ce4f1415e589486d874b5d10d934292e 147 Pfam PF07485 Domain of Unknown Function (DUF1259) 18 131 1.7E-26 T 14-10-2018 IPR011094 Uncharacterised protein family, LppY/LpqO MC28_0852 1b4a1a70a6420f5c432066fbaac69d33 168 Pfam PF04116 Fatty acid hydroxylase superfamily 42 166 1.3E-12 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 MC28_0841 e6efe99e3c70917134cba31892920132 303 SUPERFAMILY SSF103481 42 145 4.71E-12 T 14-10-2018 MC28_0841 e6efe99e3c70917134cba31892920132 303 Pfam PF00892 EamA-like transporter family 151 290 3.0E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0841 e6efe99e3c70917134cba31892920132 303 Pfam PF00892 EamA-like transporter family 11 142 2.5E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0841 e6efe99e3c70917134cba31892920132 303 SUPERFAMILY SSF103481 207 296 5.49E-15 T 14-10-2018 MC28_G375 24eae625f976d381dcf2f4568a6790b5 61 Pfam PF12728 Helix-turn-helix domain 29 60 1.4E-6 T 14-10-2018 MC28_F064 62ad1d61b3b6f29b47ef8fafcb60a552 283 Pfam PF08878 Domain of unknown function (DUF1837) 39 263 1.2E-56 T 14-10-2018 IPR014976 Protein of unknown function DUF1837 MC28_2118 60a6bb9e32f013226b05a4311e0ccd77 312 Pfam PF13536 Putative multidrug resistance efflux transporter 38 297 9.4E-107 T 14-10-2018 IPR032713 Putative multidrug resistance efflux transporter MC28_0001 8a1f95258a5226a8bdf048905186f7f8 139 SMART SM00116 75 122 6.7E-11 T 14-10-2018 IPR000644 CBS domain MC28_0001 8a1f95258a5226a8bdf048905186f7f8 139 SMART SM00116 11 58 0.023 T 14-10-2018 IPR000644 CBS domain MC28_0001 8a1f95258a5226a8bdf048905186f7f8 139 SUPERFAMILY SSF54631 2 117 1.89E-31 T 14-10-2018 MC28_0001 8a1f95258a5226a8bdf048905186f7f8 139 Gene3D G3DSA:3.10.580.10 1 138 4.8E-34 T 14-10-2018 MC28_0001 8a1f95258a5226a8bdf048905186f7f8 139 Pfam PF00571 CBS domain 4 54 3.7E-10 T 14-10-2018 IPR000644 CBS domain MC28_0001 8a1f95258a5226a8bdf048905186f7f8 139 Pfam PF00571 CBS domain 69 118 6.0E-12 T 14-10-2018 IPR000644 CBS domain MC28_1344 7242d5330b33384ca1576688a02beeec 233 SUPERFAMILY SSF46785 143 226 2.84E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1344 7242d5330b33384ca1576688a02beeec 233 Gene3D G3DSA:2.60.120.10 8 141 7.6E-30 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_1344 7242d5330b33384ca1576688a02beeec 233 Gene3D G3DSA:1.10.10.10 142 229 2.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1344 7242d5330b33384ca1576688a02beeec 233 Pfam PF00027 Cyclic nucleotide-binding domain 26 112 1.1E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_1344 7242d5330b33384ca1576688a02beeec 233 SMART SM00100 6 125 3.1E-10 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_1344 7242d5330b33384ca1576688a02beeec 233 ProSitePatterns PS00042 Crp-type HTH domain signature. 172 195 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 MC28_1344 7242d5330b33384ca1576688a02beeec 233 Pfam PF13545 Crp-like helix-turn-helix domain 147 218 8.3E-18 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_1344 7242d5330b33384ca1576688a02beeec 233 SUPERFAMILY SSF51206 12 140 1.83E-30 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like MC28_1344 7242d5330b33384ca1576688a02beeec 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 201 3.3E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_1344 7242d5330b33384ca1576688a02beeec 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 170 186 3.3E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_1344 7242d5330b33384ca1576688a02beeec 233 SMART SM00419 164 212 1.5E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_C037 eefdc51ca80148111cba7971becea85e 852 Pfam PF12846 AAA-like domain 466 837 7.7E-74 T 14-10-2018 MC28_C037 eefdc51ca80148111cba7971becea85e 852 SUPERFAMILY SSF52540 436 820 8.3E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G272 e4d8e4013a14893594c96edc4f6b2b89 121 Pfam PF10067 Predicted membrane protein (DUF2306) 43 121 1.9E-24 T 14-10-2018 IPR018750 Protein of unknown function DUF2306, membrane MC28_2187 9287ce86774ab2a354273d11463a2e6a 343 Pfam PF00487 Fatty acid desaturase 51 290 6.7E-35 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 MC28_4773 5f4257daf28062bb98836545aa02ff93 217 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 2 130 5.1E-49 T 14-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ MC28_4773 5f4257daf28062bb98836545aa02ff93 217 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 11 87 7.3E-23 T 14-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like MC28_2189 fb41edb2b61228d9b9edbab1fa9584be 575 Gene3D G3DSA:3.40.720.10 63 464 7.1E-127 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_2189 fb41edb2b61228d9b9edbab1fa9584be 575 Pfam PF00245 Alkaline phosphatase 63 484 8.9E-89 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_2189 fb41edb2b61228d9b9edbab1fa9584be 575 SMART SM00098 63 487 7.4E-81 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_2189 fb41edb2b61228d9b9edbab1fa9584be 575 SUPERFAMILY SSF53649 48 493 4.04E-115 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_2189 fb41edb2b61228d9b9edbab1fa9584be 575 PRINTS PR00113 Alkaline phosphatase signature 62 82 8.5E-32 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_2189 fb41edb2b61228d9b9edbab1fa9584be 575 PRINTS PR00113 Alkaline phosphatase signature 281 310 8.5E-32 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_2189 fb41edb2b61228d9b9edbab1fa9584be 575 PRINTS PR00113 Alkaline phosphatase signature 160 180 8.5E-32 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_2189 fb41edb2b61228d9b9edbab1fa9584be 575 PRINTS PR00113 Alkaline phosphatase signature 204 214 8.5E-32 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MC28_2189 fb41edb2b61228d9b9edbab1fa9584be 575 Gene3D G3DSA:1.10.1200.140 399 461 7.1E-127 T 14-10-2018 MC28_3842 844fb95ff168f584f93df382ee409feb 265 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 42 108 3.3E-11 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 MC28_3842 844fb95ff168f584f93df382ee409feb 265 Gene3D G3DSA:3.40.1280.10 107 264 9.8E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MC28_3842 844fb95ff168f584f93df382ee409feb 265 Gene3D G3DSA:3.30.1330.30 13 106 1.4E-23 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like MC28_3842 844fb95ff168f584f93df382ee409feb 265 SUPERFAMILY SSF55315 14 107 1.04E-24 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like MC28_3842 844fb95ff168f584f93df382ee409feb 265 SUPERFAMILY SSF75217 116 259 1.31E-42 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases MC28_3842 844fb95ff168f584f93df382ee409feb 265 Pfam PF00588 SpoU rRNA Methylase family 119 256 5.1E-37 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 MC28_3842 844fb95ff168f584f93df382ee409feb 265 SMART SM00967 42 110 1.7E-9 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 MC28_0702 437ac2736163e872c1ed719eff87c536 170 Pfam PF13047 Protein of unknown function (DUF3907) 17 164 3.7E-62 T 14-10-2018 IPR025013 Protein of unknown function DUF3907 MC28_4351 c176a5fd991bd1c645e4a1defa9647b1 193 SUPERFAMILY SSF53056 3 181 4.97E-35 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 MC28_4351 c176a5fd991bd1c645e4a1defa9647b1 193 Pfam PF00484 Carbonic anhydrase 32 177 2.0E-12 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MC28_4351 c176a5fd991bd1c645e4a1defa9647b1 193 SMART SM00947 25 182 1.7E-25 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MC28_4351 c176a5fd991bd1c645e4a1defa9647b1 193 Gene3D G3DSA:3.40.1050.10 1 182 1.5E-42 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 MC28_3596 7c51dc7ee131233fc479a5fad3ff3e1f 319 Pfam PF02562 PhoH-like protein 113 316 6.7E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 MC28_3596 7c51dc7ee131233fc479a5fad3ff3e1f 319 SUPERFAMILY SSF52540 97 279 2.12E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_3596 7c51dc7ee131233fc479a5fad3ff3e1f 319 Gene3D G3DSA:3.40.50.300 109 316 1.9E-75 T 14-10-2018 MC28_5342 10a1beb109041e98a3a6d13aa46dcd52 352 Gene3D G3DSA:1.10.3470.10 19 352 4.7E-100 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_5342 10a1beb109041e98a3a6d13aa46dcd52 352 Pfam PF01032 FecCD transport family 33 348 2.2E-93 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_5342 10a1beb109041e98a3a6d13aa46dcd52 352 SUPERFAMILY SSF81345 14 348 4.18E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_G035 d0678454fb910d899d51897206354339 431 Gene3D G3DSA:3.90.550.10 6 249 3.9E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_G035 d0678454fb910d899d51897206354339 431 Pfam PF00535 Glycosyl transferase family 2 9 155 6.2E-21 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 MC28_G035 d0678454fb910d899d51897206354339 431 SUPERFAMILY SSF53448 6 214 4.41E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_1382 0c7034d14f2910de1fd38e174719204f 127 Gene3D G3DSA:3.40.30.10 1 79 3.9E-5 T 14-10-2018 MC28_1382 0c7034d14f2910de1fd38e174719204f 127 Pfam PF04134 Protein of unknown function, DUF393 3 109 5.2E-15 T 14-10-2018 IPR007263 Protein of unknown function DUF393 MC28_1382 0c7034d14f2910de1fd38e174719204f 127 SUPERFAMILY SSF52833 1 78 1.16E-7 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_2729 27db7d2f7a14b2398c82cb9e34849449 1120 Gene3D G3DSA:3.40.50.1440 8 218 4.1E-11 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 MC28_2729 27db7d2f7a14b2398c82cb9e34849449 1120 SUPERFAMILY SSF52490 5 166 2.62E-7 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 MC28_2729 27db7d2f7a14b2398c82cb9e34849449 1120 Pfam PF13809 Tubulin like 8 345 5.1E-74 T 14-10-2018 IPR025904 Tubulin-like MC28_0421 291e98ac41f0955d17467fe53dddffc8 192 SMART SM01118 4 190 2.1E-22 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 MC28_0421 291e98ac41f0955d17467fe53dddffc8 192 Gene3D G3DSA:2.40.320.10 1 176 3.6E-51 T 14-10-2018 MC28_0421 291e98ac41f0955d17467fe53dddffc8 192 Pfam PF01928 CYTH domain 4 184 3.3E-29 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 MC28_0421 291e98ac41f0955d17467fe53dddffc8 192 SUPERFAMILY SSF55154 5 186 2.29E-30 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 MC28_0421 291e98ac41f0955d17467fe53dddffc8 192 PIRSF PIRSF012526 1 191 5.3E-75 T 14-10-2018 IPR009195 Uncharacterised protein family YjbK MC28_3848 0b42ea2436f3852c05f7547fd0c7e8a7 225 Gene3D G3DSA:2.40.30.170 113 225 5.9E-35 T 14-10-2018 MC28_3848 0b42ea2436f3852c05f7547fd0c7e8a7 225 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 142 166 3.9E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MC28_3848 0b42ea2436f3852c05f7547fd0c7e8a7 225 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 213 225 3.9E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MC28_3848 0b42ea2436f3852c05f7547fd0c7e8a7 225 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 94 173 2.6E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MC28_1563 0c7233bc742218ec4a5ea3d912a1ece9 210 PIRSF PIRSF006324 1 209 1.2E-62 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 MC28_1563 0c7233bc742218ec4a5ea3d912a1ece9 210 Pfam PF01810 LysE type translocator 14 207 5.6E-38 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 MC28_G058 ff12a0bd00a1d7dbff9b5aef13ad3c12 449 SUPERFAMILY SSF53474 18 266 2.42E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_G058 ff12a0bd00a1d7dbff9b5aef13ad3c12 449 Pfam PF00756 Putative esterase 24 256 5.2E-27 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 MC28_G058 ff12a0bd00a1d7dbff9b5aef13ad3c12 449 Gene3D G3DSA:3.40.50.1820 4 268 8.5E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0095 efee2491ae878e8b126f0e88e74d78c9 375 Gene3D G3DSA:1.20.1530.20 2 375 1.9E-105 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily MC28_0095 efee2491ae878e8b126f0e88e74d78c9 375 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 279 6.2E-78 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 MC28_0095 efee2491ae878e8b126f0e88e74d78c9 375 Pfam PF00999 Sodium/hydrogen exchanger family 8 370 1.8E-79 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 MC28_3999 39921e661334543312f279eaa62161ea 154 Gene3D G3DSA:3.90.1170.40 3 145 1.0E-52 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 MC28_3999 39921e661334543312f279eaa62161ea 154 SUPERFAMILY SSF54690 5 138 8.76E-47 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 MC28_3999 39921e661334543312f279eaa62161ea 154 Pfam PF02391 MoaE protein 10 119 1.3E-35 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 MC28_0157 615b8291b2385286a0c26ce62d861c8e 53 Pfam PF11121 Protein of unknown function (DUF2639) 2 38 1.2E-20 T 14-10-2018 IPR022580 Protein of unknown function DUF2639 MC28_0157 615b8291b2385286a0c26ce62d861c8e 53 ProDom PD049467 YFLJ 1 38 3.0E-15 T 14-10-2018 IPR022580 Protein of unknown function DUF2639 MC28_G065 4a9350718a2bd90f1bdcf3a0a12da97b 378 Pfam PF01385 Probable transposase 171 280 3.3E-25 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 MC28_G065 4a9350718a2bd90f1bdcf3a0a12da97b 378 Pfam PF07282 Putative transposase DNA-binding domain 294 364 3.1E-25 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_G065 4a9350718a2bd90f1bdcf3a0a12da97b 378 Pfam PF12323 Helix-turn-helix domain 7 53 2.2E-20 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain MC28_G065 4a9350718a2bd90f1bdcf3a0a12da97b 378 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 249 321 3.2E-15 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_0183 92bb4d7e6866c42aa0fd47147a82c076 108 SUPERFAMILY SSF101386 31 89 3.55E-7 T 14-10-2018 MC28_0183 92bb4d7e6866c42aa0fd47147a82c076 108 Gene3D G3DSA:1.10.287.1080 6 93 2.4E-5 T 14-10-2018 MC28_2527 86a984b52b5aa246d1546594efbc7f00 245 Gene3D G3DSA:3.40.50.10990 57 217 1.2E-53 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 MC28_2527 86a984b52b5aa246d1546594efbc7f00 245 SUPERFAMILY SSF142695 70 217 8.76E-46 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 MC28_2527 86a984b52b5aa246d1546594efbc7f00 245 Pfam PF00925 GTP cyclohydrolase II 72 214 6.7E-47 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 MC28_3453 35c147c17313b8ff8f390355b1da997f 333 SUPERFAMILY SSF52518 10 333 4.17E-104 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold MC28_3453 35c147c17313b8ff8f390355b1da997f 333 Gene3D G3DSA:3.40.50.970 2 333 2.7E-119 T 14-10-2018 MC28_3453 35c147c17313b8ff8f390355b1da997f 333 Pfam PF00676 Dehydrogenase E1 component 24 323 8.9E-105 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 MC28_1046 deff1500f3305f422513e906c39a2549 441 Pfam PF01979 Amidohydrolase family 62 414 9.3E-74 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 MC28_1046 deff1500f3305f422513e906c39a2549 441 SUPERFAMILY SSF51556 65 364 6.81E-95 T 14-10-2018 IPR032466 Metal-dependent hydrolase MC28_1046 deff1500f3305f422513e906c39a2549 441 Gene3D G3DSA:3.20.20.140 66 358 5.3E-147 T 14-10-2018 MC28_1046 deff1500f3305f422513e906c39a2549 441 Gene3D G3DSA:2.30.40.10 16 432 5.3E-147 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_1046 deff1500f3305f422513e906c39a2549 441 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 4 440 44.107 T 14-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 MC28_1046 deff1500f3305f422513e906c39a2549 441 SUPERFAMILY SSF51338 10 439 1.27E-32 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 MC28_F226 4bcd41a317034554059b11e01eaef408 647 Pfam PF02687 FtsX-like permease family 82 174 8.1E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_F226 4bcd41a317034554059b11e01eaef408 647 PIRSF PIRSF018968 1 645 1.3E-127 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_5361 ed7f60730cd7ab08e6b2bb6ad526b370 410 Gene3D G3DSA:3.30.565.10 275 405 2.4E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5361 ed7f60730cd7ab08e6b2bb6ad526b370 410 SUPERFAMILY SSF55781 62 193 8.07E-10 T 14-10-2018 MC28_5361 ed7f60730cd7ab08e6b2bb6ad526b370 410 Pfam PF07730 Histidine kinase 203 267 8.8E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MC28_5361 ed7f60730cd7ab08e6b2bb6ad526b370 410 SUPERFAMILY SSF55874 267 403 5.37E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MC28_5361 ed7f60730cd7ab08e6b2bb6ad526b370 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 404 5.6E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_5361 ed7f60730cd7ab08e6b2bb6ad526b370 410 Gene3D G3DSA:3.30.450.40 113 189 4.3E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily MC28_5361 ed7f60730cd7ab08e6b2bb6ad526b370 410 SMART SM00387 308 406 2.6E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase MC28_2776 17ceb1b5ab8579b754efe455d89fd0ed 537 Gene3D G3DSA:3.40.50.12780 1 431 5.7E-120 T 14-10-2018 MC28_2776 17ceb1b5ab8579b754efe455d89fd0ed 537 Gene3D G3DSA:3.30.300.310 432 535 3.9E-34 T 14-10-2018 MC28_2776 17ceb1b5ab8579b754efe455d89fd0ed 537 SUPERFAMILY SSF56801 7 532 5.23E-134 T 14-10-2018 MC28_2776 17ceb1b5ab8579b754efe455d89fd0ed 537 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 520 1.9E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_2776 17ceb1b5ab8579b754efe455d89fd0ed 537 Pfam PF00501 AMP-binding enzyme 23 436 5.6E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_3169 68f24dc61c395dd4de57c7975069e174 66 SUPERFAMILY SSF49265 2 55 9.68E-8 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 MC28_3169 68f24dc61c395dd4de57c7975069e174 66 Gene3D G3DSA:2.60.40.10 1 61 4.3E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_G393 267b5518e194e2f8b0864153aa7d9291 92 Gene3D G3DSA:2.160.20.10 1 89 5.5E-8 T 14-10-2018 IPR012334 Pectin lyase fold MC28_G393 267b5518e194e2f8b0864153aa7d9291 92 Pfam PF13229 Right handed beta helix region 2 70 5.1E-6 T 14-10-2018 IPR039448 Right handed beta helix domain MC28_G393 267b5518e194e2f8b0864153aa7d9291 92 SUPERFAMILY SSF51126 2 75 1.89E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor MC28_5419 b69ec0ed445fb7d0fcc2ad5e3bcdf092 463 PIRSF PIRSF006060 1 461 2.0E-73 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5419 b69ec0ed445fb7d0fcc2ad5e3bcdf092 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 MC28_5419 b69ec0ed445fb7d0fcc2ad5e3bcdf092 463 Pfam PF00324 Amino acid permease 18 448 6.4E-120 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 MC28_5419 b69ec0ed445fb7d0fcc2ad5e3bcdf092 463 Gene3D G3DSA:1.20.1740.10 10 460 2.3E-65 T 14-10-2018 MC28_3814 a77a8de60e8e8589b8a728e100060b06 234 Pfam PF12730 ABC-2 family transporter protein 4 182 9.0E-9 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 MC28_4684 e062988a5a0609a31cb2e97e181b5465 215 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 7 214 1.4E-59 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 MC28_4684 e062988a5a0609a31cb2e97e181b5465 215 Pfam PF03006 Haemolysin-III related 4 207 5.3E-47 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 MC28_D159 68f609c52341332fd4cadd012375e629 73 ProDom PD275078 PLASMID PXO2-72/BXB0098/GBAA_PXO2_0098 1 59 4.0E-23 T 14-10-2018 IPR020250 Uncharacterised protein family, plasmid pXO2-72 MC28_D159 68f609c52341332fd4cadd012375e629 73 Pfam PF17443 Uncharacterized protein pXO2-72 1 59 1.4E-35 T 14-10-2018 IPR020250 Uncharacterised protein family, plasmid pXO2-72 MC28_0002 74a499596d938d4c767c1d91c58bd7e0 383 Pfam PF13142 Domain of unknown function (DUF3960) 1 89 6.3E-61 T 14-10-2018 IPR025046 Domain of unknown function DUF3960 MC28_0002 74a499596d938d4c767c1d91c58bd7e0 383 Pfam PF13112 Protein of unknown function (DUF3965) 91 381 1.8E-205 T 14-10-2018 IPR025087 Domain of unknown function DUF3965 MC28_5241 1b17f34e083bbb1920793709943a1895 301 Gene3D G3DSA:3.40.50.720 2 300 7.8E-72 T 14-10-2018 MC28_5241 1b17f34e083bbb1920793709943a1895 301 SUPERFAMILY SSF51735 1 295 8.67E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_5241 1b17f34e083bbb1920793709943a1895 301 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 6.2E-19 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 MC28_5241 1b17f34e083bbb1920793709943a1895 301 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 7.1E-108 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 MC28_5241 1b17f34e083bbb1920793709943a1895 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 2.9E-17 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_2419 bd09fea356947cf450d5caa136501dec 450 SUPERFAMILY SSF53720 1 450 5.76E-161 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_2419 bd09fea356947cf450d5caa136501dec 450 Gene3D G3DSA:3.40.605.10 3 450 4.7E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 MC28_2419 bd09fea356947cf450d5caa136501dec 450 Gene3D G3DSA:3.40.309.10 249 442 4.7E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 MC28_2419 bd09fea356947cf450d5caa136501dec 450 Pfam PF00171 Aldehyde dehydrogenase family 7 450 8.4E-169 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 MC28_2419 bd09fea356947cf450d5caa136501dec 450 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 MC28_2419 bd09fea356947cf450d5caa136501dec 450 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 MC28_1803 15658b16f8046143c927b19178100c27 227 Gene3D G3DSA:2.40.40.60 68 170 3.1E-17 T 14-10-2018 MC28_1803 15658b16f8046143c927b19178100c27 227 Pfam PF17294 Uncharacterised lipoprotein family 35 205 1.5E-45 T 14-10-2018 IPR035253 Putative lipoprotein, bacteria MC28_F091 ce5713cec262ee57b3c06c4b61c1aefa 131 Pfam PF11518 Protein of unknown function (DUF3221) 41 122 1.2E-6 T 14-10-2018 IPR021598 Protein of unknown function DUF3221 MC28_3253 90e6f4fd61c5df726472c5aa15d40b10 110 Pfam PF11256 Protein of unknown function (DUF3055) 17 96 1.6E-34 T 14-10-2018 IPR021415 Protein of unknown function DUF3055 MC28_G261 a82a0ac21d288371cb9f66437975ee61 134 Pfam PF12648 TcpE family 12 104 9.6E-21 T 14-10-2018 IPR025608 TcpE family MC28_2965 f2f6d0f36e68aa6bebfd349f149ecf61 67 Pfam PF14035 YlzJ-like protein 3 65 3.7E-21 T 14-10-2018 IPR025619 YlzJ-like protein MC28_G034 f41f126a75b46d5677a5943623384b81 376 SMART SM00028 143 176 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_G034 f41f126a75b46d5677a5943623384b81 376 SMART SM00028 184 217 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_G034 f41f126a75b46d5677a5943623384b81 376 SMART SM00028 224 257 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_G034 f41f126a75b46d5677a5943623384b81 376 SMART SM00028 258 291 90.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_G034 f41f126a75b46d5677a5943623384b81 376 SUPERFAMILY SSF48452 116 319 3.79E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_G034 f41f126a75b46d5677a5943623384b81 376 Gene3D G3DSA:1.25.40.10 6 376 4.4E-89 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_2977 23125abdc910d68f825fb47df5bfcd44 108 Pfam PF08863 YolD-like protein 16 107 7.5E-26 T 14-10-2018 IPR014962 YolD-like protein MC28_E050 293ca49431c3c7bce074b3ed4dedb50b 118 Pfam PF13610 DDE domain 7 62 1.1E-13 T 14-10-2018 IPR032874 DDE domain MC28_1926 82cbde2eb5c8ec611930ba4af54f8154 153 SUPERFAMILY SSF55729 5 146 2.03E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1926 82cbde2eb5c8ec611930ba4af54f8154 153 Gene3D G3DSA:3.40.630.30 2 153 5.3E-40 T 14-10-2018 MC28_1926 82cbde2eb5c8ec611930ba4af54f8154 153 Pfam PF00583 Acetyltransferase (GNAT) family 33 142 3.2E-17 T 14-10-2018 IPR000182 GNAT domain MC28_3609 f5422cc66097e97dabf7199c4b9a4b1e 124 Gene3D G3DSA:1.10.10.10 3 124 5.1E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3609 f5422cc66097e97dabf7199c4b9a4b1e 124 Pfam PF01638 HxlR-like helix-turn-helix 28 117 2.0E-33 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type MC28_3609 f5422cc66097e97dabf7199c4b9a4b1e 124 SUPERFAMILY SSF46785 16 119 1.56E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4539 3f280f01c30ea3beb2e333ac90c16f5e 217 Pfam PF06161 Protein of unknown function (DUF975) 2 127 6.4E-15 T 14-10-2018 IPR010380 Protein of unknown function DUF975 MC28_4539 3f280f01c30ea3beb2e333ac90c16f5e 217 Pfam PF06161 Protein of unknown function (DUF975) 120 207 4.5E-28 T 14-10-2018 IPR010380 Protein of unknown function DUF975 MC28_5134 415c2969e157ad8bf8e214256d171825 288 Pfam PF03631 Virulence factor BrkB 26 277 8.6E-67 T 14-10-2018 IPR017039 Virulence factor BrkB MC28_5134 415c2969e157ad8bf8e214256d171825 288 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 15 278 2.2E-54 T 14-10-2018 IPR017039 Virulence factor BrkB MC28_5134 415c2969e157ad8bf8e214256d171825 288 PIRSF PIRSF035875 1 288 3.3E-92 T 14-10-2018 IPR017039 Virulence factor BrkB MC28_3961 e7671789be480c119d42ef8b8478554e 371 Gene3D G3DSA:3.40.1830.10 2 165 8.7E-14 T 14-10-2018 IPR035097 Peptidase M29, N-terminal MC28_3961 e7671789be480c119d42ef8b8478554e 371 Pfam PF02073 Thermophilic metalloprotease (M29) 3 338 3.6E-60 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 MC28_3961 e7671789be480c119d42ef8b8478554e 371 SUPERFAMILY SSF144052 1 359 5.36E-112 T 14-10-2018 MC28_1613 b9f534e03ade1a02e87188b890ef2f9c 432 Gene3D G3DSA:3.40.50.1110 261 432 1.6E-11 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_1613 b9f534e03ade1a02e87188b890ef2f9c 432 SUPERFAMILY SSF52266 261 430 3.33E-15 T 14-10-2018 MC28_3119 dd3c1380208e56c9945d1f3258ae974f 168 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 3.7E-17 T 14-10-2018 IPR019933 DivIVA domain MC28_3119 dd3c1380208e56c9945d1f3258ae974f 168 Pfam PF05103 DivIVA protein 3 133 6.8E-52 T 14-10-2018 IPR007793 DivIVA family MC28_B39 3978ca4fd9d022ca85cf26ea14bbeb0f 159 Pfam PF04492 Bacteriophage replication protein O 22 111 2.0E-7 T 14-10-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 MC28_B39 3978ca4fd9d022ca85cf26ea14bbeb0f 159 Gene3D G3DSA:1.10.10.10 18 117 4.8E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2905 fd033f4621255258df76b3606423ebc1 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 243 1.4E-22 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase MC28_2905 fd033f4621255258df76b3606423ebc1 252 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 MC28_2905 fd033f4621255258df76b3606423ebc1 252 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 MC28_2905 fd033f4621255258df76b3606423ebc1 252 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 185 201 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 MC28_2905 fd033f4621255258df76b3606423ebc1 252 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 250 1.9E-102 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 MC28_2905 fd033f4621255258df76b3606423ebc1 252 SUPERFAMILY SSF56219 2 251 4.84E-80 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_2905 fd033f4621255258df76b3606423ebc1 252 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 250 4.7E-100 T 14-10-2018 MC28_2905 fd033f4621255258df76b3606423ebc1 252 Gene3D G3DSA:3.60.10.10 1 250 1.9E-97 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_5114 8ec8c1fe5e7481c18d03bafba11d1886 193 Gene3D G3DSA:1.10.10.60 7 55 2.5E-19 T 14-10-2018 MC28_5114 8ec8c1fe5e7481c18d03bafba11d1886 193 SUPERFAMILY SSF46689 2 72 1.8E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_5114 8ec8c1fe5e7481c18d03bafba11d1886 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_5114 8ec8c1fe5e7481c18d03bafba11d1886 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_5114 8ec8c1fe5e7481c18d03bafba11d1886 193 Gene3D G3DSA:1.10.357.10 56 193 1.2E-41 T 14-10-2018 MC28_5114 8ec8c1fe5e7481c18d03bafba11d1886 193 Pfam PF08360 QacR-like protein, C-terminal region 62 192 3.1E-56 T 14-10-2018 IPR013571 Transcription regulator QacR, C-terminal GO:0003700|GO:0045892 MC28_5114 8ec8c1fe5e7481c18d03bafba11d1886 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 56 1.1E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_5114 8ec8c1fe5e7481c18d03bafba11d1886 193 SUPERFAMILY SSF48498 78 191 5.13E-37 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MC28_5318 acf60be5f7a1d8e9a21fd14a5305a18d 471 Pfam PF13520 Amino acid permease 26 430 2.5E-64 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5318 acf60be5f7a1d8e9a21fd14a5305a18d 471 PIRSF PIRSF006060 5 470 6.0E-92 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5318 acf60be5f7a1d8e9a21fd14a5305a18d 471 Gene3D G3DSA:1.20.1740.10 20 466 1.3E-129 T 14-10-2018 MC28_G334 1d0603a463e293567535cdfce402c611 259 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 160 231 5.9E-27 T 14-10-2018 IPR011741 Phage conserved hypothetical protein, C-terminal MC28_G334 1d0603a463e293567535cdfce402c611 259 TIGRFAM TIGR02220 phg_TIGR02220: phage conserved hypothetical protein, C-terminal domain 158 232 4.3E-31 T 14-10-2018 IPR011741 Phage conserved hypothetical protein, C-terminal MC28_2003 055e3c95e5c2f470d5f3718cca6aa836 691 Pfam PF00580 UvrD/REP helicase N-terminal domain 258 506 4.4E-10 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 MC28_2003 055e3c95e5c2f470d5f3718cca6aa836 691 Pfam PF13361 UvrD-like helicase C-terminal domain 525 619 2.6E-6 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 MC28_2003 055e3c95e5c2f470d5f3718cca6aa836 691 Gene3D G3DSA:3.40.50.300 355 522 8.2E-10 T 14-10-2018 MC28_2003 055e3c95e5c2f470d5f3718cca6aa836 691 Gene3D G3DSA:3.40.50.300 171 320 3.9E-11 T 14-10-2018 MC28_2003 055e3c95e5c2f470d5f3718cca6aa836 691 Gene3D G3DSA:3.40.50.300 526 691 8.6E-55 T 14-10-2018 MC28_2003 055e3c95e5c2f470d5f3718cca6aa836 691 SUPERFAMILY SSF52540 175 682 5.81E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2003 055e3c95e5c2f470d5f3718cca6aa836 691 Pfam PF13538 UvrD-like helicase C-terminal domain 630 677 2.2E-11 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain MC28_4641 32637d72263d201a120a2dd721f19970 231 Gene3D G3DSA:3.40.50.1000 6 223 4.0E-77 T 14-10-2018 IPR023214 HAD superfamily MC28_4641 32637d72263d201a120a2dd721f19970 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 199 1.7E-23 T 14-10-2018 MC28_4641 32637d72263d201a120a2dd721f19970 231 SUPERFAMILY SSF56784 3 228 1.65E-44 T 14-10-2018 IPR036412 HAD-like superfamily MC28_4641 32637d72263d201a120a2dd721f19970 231 Gene3D G3DSA:1.10.150.240 17 100 4.0E-77 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_4641 32637d72263d201a120a2dd721f19970 231 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 226 2.4E-85 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 MC28_4641 32637d72263d201a120a2dd721f19970 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 95 194 4.4E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_3965 c255b821cc1e12ea639675aee3efaa89 301 SUPERFAMILY SSF103481 189 286 1.24E-8 T 14-10-2018 MC28_3965 c255b821cc1e12ea639675aee3efaa89 301 SUPERFAMILY SSF103481 38 141 4.05E-18 T 14-10-2018 MC28_3965 c255b821cc1e12ea639675aee3efaa89 301 Pfam PF00892 EamA-like transporter family 9 139 1.3E-26 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_3965 c255b821cc1e12ea639675aee3efaa89 301 Pfam PF00892 EamA-like transporter family 153 287 1.1E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_1896 30e2b231a71250195679bdfdedd6a8cd 123 Pfam PF14176 YxiJ-like protein 9 118 1.9E-50 T 14-10-2018 IPR025551 Immunity protein WapI-like MC28_4322 e80c7e6fd2dc8e18eb67bb4e44c8680f 480 Pfam PF01235 Sodium:alanine symporter family 59 454 9.3E-164 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4322 e80c7e6fd2dc8e18eb67bb4e44c8680f 480 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 97 112 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4322 e80c7e6fd2dc8e18eb67bb4e44c8680f 480 PRINTS PR00175 Sodium/alanine symporter signature 187 205 6.6E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4322 e80c7e6fd2dc8e18eb67bb4e44c8680f 480 PRINTS PR00175 Sodium/alanine symporter signature 215 234 6.6E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4322 e80c7e6fd2dc8e18eb67bb4e44c8680f 480 PRINTS PR00175 Sodium/alanine symporter signature 97 119 6.6E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4322 e80c7e6fd2dc8e18eb67bb4e44c8680f 480 PRINTS PR00175 Sodium/alanine symporter signature 411 431 6.6E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4322 e80c7e6fd2dc8e18eb67bb4e44c8680f 480 PRINTS PR00175 Sodium/alanine symporter signature 306 324 6.6E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4322 e80c7e6fd2dc8e18eb67bb4e44c8680f 480 PRINTS PR00175 Sodium/alanine symporter signature 351 373 6.6E-61 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_4322 e80c7e6fd2dc8e18eb67bb4e44c8680f 480 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 2.8E-157 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MC28_2492 bf8c721bd1205c28d380c6baf7fb3f33 62 SUPERFAMILY SSF53335 8 61 1.91E-5 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4057 4aba16a791182f0e03f93cdd320d9290 301 Pfam PF00892 EamA-like transporter family 7 138 2.0E-29 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_4057 4aba16a791182f0e03f93cdd320d9290 301 Pfam PF00892 EamA-like transporter family 153 284 6.2E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_4057 4aba16a791182f0e03f93cdd320d9290 301 SUPERFAMILY SSF103481 201 287 4.58E-13 T 14-10-2018 MC28_4057 4aba16a791182f0e03f93cdd320d9290 301 SUPERFAMILY SSF103481 39 142 1.27E-17 T 14-10-2018 MC28_5376 d9a73ca8b1010844f344f0d0558f3000 316 Gene3D G3DSA:1.10.10.10 2 66 3.7E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_5376 d9a73ca8b1010844f344f0d0558f3000 316 SUPERFAMILY SSF46785 6 63 7.72E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_5376 d9a73ca8b1010844f344f0d0558f3000 316 Pfam PF08279 HTH domain 9 64 3.4E-16 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 MC28_5376 d9a73ca8b1010844f344f0d0558f3000 316 Pfam PF13280 WYL domain 142 311 2.0E-25 T 14-10-2018 IPR026881 WYL domain MC28_5376 d9a73ca8b1010844f344f0d0558f3000 316 PIRSF PIRSF016838 4 316 1.4E-19 T 14-10-2018 IPR028349 Protein PafC MC28_2694 2454dfbf389566184485476a5852649e 185 Gene3D G3DSA:2.160.10.10 2 184 5.4E-59 T 14-10-2018 MC28_2694 2454dfbf389566184485476a5852649e 185 SUPERFAMILY SSF51161 28 175 1.1E-43 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_2694 2454dfbf389566184485476a5852649e 185 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 94 122 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 MC28_2694 2454dfbf389566184485476a5852649e 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 86 120 1.9E-7 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_2151 e58d453d5503b0387686a713bae671d5 660 Gene3D G3DSA:2.30.30.40 89 146 6.8E-12 T 14-10-2018 MC28_2151 e58d453d5503b0387686a713bae671d5 660 Gene3D G3DSA:2.40.40.10 501 655 7.9E-10 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_2151 e58d453d5503b0387686a713bae671d5 660 Gene3D G3DSA:2.30.30.40 28 88 1.2E-15 T 14-10-2018 MC28_2151 e58d453d5503b0387686a713bae671d5 660 SUPERFAMILY SSF50685 598 651 1.46E-10 T 14-10-2018 IPR036908 RlpA-like domain superfamily MC28_2151 e58d453d5503b0387686a713bae671d5 660 Pfam PF08239 Bacterial SH3 domain 36 84 2.0E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2151 e58d453d5503b0387686a713bae671d5 660 Pfam PF08239 Bacterial SH3 domain 96 146 7.3E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2151 e58d453d5503b0387686a713bae671d5 660 SMART SM00287 89 149 3.0E-6 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2151 e58d453d5503b0387686a713bae671d5 660 SMART SM00287 27 88 1.5E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type MC28_2151 e58d453d5503b0387686a713bae671d5 660 Pfam PF06725 3D domain 600 660 4.8E-21 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 MC28_0094 abec4b5ca27de5e000bd0eecc8acdb3d 467 PIRSF PIRSF006060 7 467 8.4E-102 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_0094 abec4b5ca27de5e000bd0eecc8acdb3d 467 Pfam PF13520 Amino acid permease 24 437 8.1E-64 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_0094 abec4b5ca27de5e000bd0eecc8acdb3d 467 Gene3D G3DSA:1.20.1740.10 17 465 3.0E-137 T 14-10-2018 MC28_3292 7883862d5bb7f835f3a746c75d94ed48 183 SUPERFAMILY SSF46785 2 169 5.13E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3292 7883862d5bb7f835f3a746c75d94ed48 183 Pfam PF03551 Transcriptional regulator PadR-like family 5 79 7.1E-9 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_3292 7883862d5bb7f835f3a746c75d94ed48 183 Gene3D G3DSA:1.10.10.10 1 88 1.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0844 4ecedb4bba77aac1fbb3b13df12215b4 161 Pfam PF06177 QueT transporter 6 153 3.5E-31 T 14-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 MC28_0844 4ecedb4bba77aac1fbb3b13df12215b4 161 PIRSF PIRSF031501 1 161 1.8E-54 T 14-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 MC28_G249 48be01bfea1e4d2e265e7b1565f29ca4 565 Gene3D G3DSA:1.10.260.40 500 560 4.0E-6 T 14-10-2018 MC28_C014 8cb3cb17d784673eed0b945776f9b090 93 Pfam PF12728 Helix-turn-helix domain 44 83 2.6E-6 T 14-10-2018 MC28_3494 2620f7ddf12ae331b75b0bbb0ea02287 306 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 56 297 1.0E-138 T 14-10-2018 IPR010787 Protein of unknown function DUF1385 MC28_3494 2620f7ddf12ae331b75b0bbb0ea02287 306 Pfam PF07136 Protein of unknown function (DUF1385) 56 300 1.3E-78 T 14-10-2018 IPR010787 Protein of unknown function DUF1385 MC28_F159 81807abfb8ba6561b7b3116dc00983ab 191 Pfam PF00746 LPXTG cell wall anchor motif 151 190 1.0E-4 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor MC28_F159 81807abfb8ba6561b7b3116dc00983ab 191 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 157 189 1.1E-4 T 14-10-2018 MC28_F159 81807abfb8ba6561b7b3116dc00983ab 191 Pfam PF05901 Excalibur calcium-binding domain 34 74 1.1E-6 T 14-10-2018 IPR008613 Excalibur calcium-binding domain MC28_0600 f8f298f0d0b44718a3738566be979241 137 Gene3D G3DSA:1.20.1290.10 12 137 1.7E-12 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 MC28_0600 f8f298f0d0b44718a3738566be979241 137 SUPERFAMILY SSF69118 15 137 5.4E-23 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 MC28_1416 b444e0701be3b57eb550ea180fcacc77 239 Pfam PF01553 Acyltransferase 60 184 7.7E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 MC28_1416 b444e0701be3b57eb550ea180fcacc77 239 SMART SM00563 74 188 4.9E-37 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 MC28_1416 b444e0701be3b57eb550ea180fcacc77 239 SUPERFAMILY SSF69593 46 237 6.28E-52 T 14-10-2018 MC28_1416 b444e0701be3b57eb550ea180fcacc77 239 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 60 185 3.0E-37 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 MC28_1968 54865bc4a83bf8ac0bcb8896057b9789 159 SUPERFAMILY SSF109854 27 153 3.48E-22 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1968 54865bc4a83bf8ac0bcb8896057b9789 159 Pfam PF12867 DinB superfamily 26 146 1.9E-10 T 14-10-2018 IPR024775 DinB-like domain MC28_1968 54865bc4a83bf8ac0bcb8896057b9789 159 Gene3D G3DSA:1.20.120.450 23 153 1.7E-18 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_E091 aac3275c0c39d5433ba9b1fc6de8fb07 495 PIRSF PIRSF005690 11 495 3.9E-168 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_E091 aac3275c0c39d5433ba9b1fc6de8fb07 495 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 30 484 6.0E-169 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_4824 9fed504cd041b3a4dad62064c09dc77a 79 Gene3D G3DSA:3.30.70.330 1 77 5.0E-24 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily MC28_4824 9fed504cd041b3a4dad62064c09dc77a 79 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 1 78 13.414 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 MC28_4824 9fed504cd041b3a4dad62064c09dc77a 79 ProSitePatterns PS00050 Ribosomal protein L23 signature. 60 75 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 MC28_4824 9fed504cd041b3a4dad62064c09dc77a 79 SUPERFAMILY SSF54189 2 74 2.91E-23 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4824 9fed504cd041b3a4dad62064c09dc77a 79 Pfam PF00276 Ribosomal protein L23 1 71 1.5E-24 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 MC28_G380 5ad86a5c2035be9a2bb8dad41f130b42 327 SMART SM00507 241 300 8.4E-4 T 14-10-2018 IPR003615 HNH nuclease MC28_G380 5ad86a5c2035be9a2bb8dad41f130b42 327 Pfam PF01844 HNH endonuclease 254 303 2.7E-7 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 MC28_2178 8be397067bfa255faafa30e4767540fa 316 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 111 314 1.1E-47 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 MC28_D162 62c648157f137a6674016c975ce282ae 115 Pfam PF08863 YolD-like protein 23 115 3.1E-26 T 14-10-2018 IPR014962 YolD-like protein MC28_0392 9c12735b2b62b3694f2ffa2b2dbd0b5a 244 SUPERFAMILY SSF53474 15 162 4.5E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_0392 9c12735b2b62b3694f2ffa2b2dbd0b5a 244 Gene3D G3DSA:3.40.50.1820 14 231 1.3E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3037 4c50803541b5293fe283fd7c602ec60d 103 SUPERFAMILY SSF55315 3 98 9.6E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like MC28_3037 4c50803541b5293fe283fd7c602ec60d 103 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 4 93 1.6E-16 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 MC28_3037 4c50803541b5293fe283fd7c602ec60d 103 Gene3D G3DSA:3.30.1330.30 1 98 2.4E-37 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like MC28_F230 7446c7e81d607372d9ce43c9c90226bd 148 Pfam PF14567 SMI1-KNR4 cell-wall 7 140 4.2E-36 T 14-10-2018 MC28_F230 7446c7e81d607372d9ce43c9c90226bd 148 SMART SM00860 21 137 1.2E-6 T 14-10-2018 IPR018958 Knr4/Smi1-like domain MC28_F230 7446c7e81d607372d9ce43c9c90226bd 148 Gene3D G3DSA:3.40.1580.10 1 148 1.2E-36 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily MC28_F230 7446c7e81d607372d9ce43c9c90226bd 148 SUPERFAMILY SSF160631 3 145 5.23E-35 T 14-10-2018 MC28_0799 0a3ebb524d820049eb6f7e81befff337 293 Pfam PF17236 Family of unknown function (DUF5309) 14 287 3.0E-78 T 14-10-2018 IPR035198 Protein of unknown function DUF5309 MC28_0578 609b21640d562c7f4bedd38e7d7b8015 192 Pfam PF00583 Acetyltransferase (GNAT) family 41 165 2.5E-14 T 14-10-2018 IPR000182 GNAT domain MC28_0578 609b21640d562c7f4bedd38e7d7b8015 192 Gene3D G3DSA:3.40.630.30 1 190 4.0E-46 T 14-10-2018 MC28_0578 609b21640d562c7f4bedd38e7d7b8015 192 SUPERFAMILY SSF55729 2 183 1.03E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_0821 e4e7547f0a28634bb5b9fa7feed90adf 440 Pfam PF00860 Permease family 7 385 1.4E-114 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 MC28_0821 e4e7547f0a28634bb5b9fa7feed90adf 440 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 6 415 2.4E-138 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 MC28_0821 e4e7547f0a28634bb5b9fa7feed90adf 440 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 332 352 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 MC28_0821 e4e7547f0a28634bb5b9fa7feed90adf 440 TIGRFAM TIGR03173 pbuX: xanthine permease 11 417 7.0E-168 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 MC28_3239 865f874c8a11069088f398961a9b3174 54 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 2 44 8.8E-23 T 14-10-2018 IPR019241 Protein of unknown function DUF2197 MC28_4995 dd2e2932456fdecbcabb247f720bcffb 294 SUPERFAMILY SSF51735 3 289 3.63E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4995 dd2e2932456fdecbcabb247f720bcffb 294 Gene3D G3DSA:3.90.25.10 154 280 2.2E-68 T 14-10-2018 MC28_4995 dd2e2932456fdecbcabb247f720bcffb 294 Pfam PF16363 GDP-mannose 4,6 dehydratase 21 280 2.7E-34 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_4995 dd2e2932456fdecbcabb247f720bcffb 294 Gene3D G3DSA:3.40.50.720 3 219 2.2E-68 T 14-10-2018 MC28_3202 e645a193970109495aa95a226549a818 118 Pfam PF01381 Helix-turn-helix 10 62 2.8E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3202 e645a193970109495aa95a226549a818 118 SMART SM00530 7 62 5.1E-19 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3202 e645a193970109495aa95a226549a818 118 SUPERFAMILY SSF47413 1 67 1.07E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3202 e645a193970109495aa95a226549a818 118 Gene3D G3DSA:1.10.260.40 3 118 1.5E-24 T 14-10-2018 MC28_2346 99df868e8d1b69cf0ae446b220d1c7a2 769 Gene3D G3DSA:3.40.50.300 99 404 6.5E-45 T 14-10-2018 MC28_2346 99df868e8d1b69cf0ae446b220d1c7a2 769 Pfam PF13086 AAA domain 169 384 1.1E-26 T 14-10-2018 MC28_2346 99df868e8d1b69cf0ae446b220d1c7a2 769 SUPERFAMILY SSF52540 169 634 2.16E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2346 99df868e8d1b69cf0ae446b220d1c7a2 769 Gene3D G3DSA:3.40.50.300 426 637 5.3E-33 T 14-10-2018 MC28_2346 99df868e8d1b69cf0ae446b220d1c7a2 769 Pfam PF13087 AAA domain 416 600 8.9E-28 T 14-10-2018 MC28_E073 afccd350548bcd575408b73ba58597e5 550 SUPERFAMILY SSF49785 360 483 4.89E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E073 afccd350548bcd575408b73ba58597e5 550 Gene3D G3DSA:2.60.120.260 356 483 7.3E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_1807 0cef1b616eca881c51729cf673581725 482 Gene3D G3DSA:3.90.1150.10 115 474 9.8E-97 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 MC28_1807 0cef1b616eca881c51729cf673581725 482 Gene3D G3DSA:3.40.640.10 153 372 9.8E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_1807 0cef1b616eca881c51729cf673581725 482 SMART SM00345 17 76 6.9E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1807 0cef1b616eca881c51729cf673581725 482 SUPERFAMILY SSF53383 109 478 9.08E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_1807 0cef1b616eca881c51729cf673581725 482 SUPERFAMILY SSF46785 7 86 2.42E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1807 0cef1b616eca881c51729cf673581725 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 7.6E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1807 0cef1b616eca881c51729cf673581725 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 7.6E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1807 0cef1b616eca881c51729cf673581725 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 76 2.6E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1807 0cef1b616eca881c51729cf673581725 482 Gene3D G3DSA:1.10.10.10 6 87 1.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1807 0cef1b616eca881c51729cf673581725 482 Pfam PF00155 Aminotransferase class I and II 146 465 2.6E-27 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_1873 01e981ceb10c632e104d331a19d89a9b 304 SUPERFAMILY SSF103481 43 144 5.23E-18 T 14-10-2018 MC28_1873 01e981ceb10c632e104d331a19d89a9b 304 Pfam PF00892 EamA-like transporter family 16 142 1.5E-29 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_1873 01e981ceb10c632e104d331a19d89a9b 304 Pfam PF00892 EamA-like transporter family 152 284 2.3E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_1873 01e981ceb10c632e104d331a19d89a9b 304 SUPERFAMILY SSF103481 189 286 2.22E-10 T 14-10-2018 MC28_2632 25d3324394535649eb37f77b01347f5d 236 PIRSF PIRSF000709 6 113 4.3E-7 T 14-10-2018 MC28_2632 25d3324394535649eb37f77b01347f5d 236 Gene3D G3DSA:3.40.50.1240 2 236 2.8E-64 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_2632 25d3324394535649eb37f77b01347f5d 236 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 15 223 1.1E-31 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_2632 25d3324394535649eb37f77b01347f5d 236 SUPERFAMILY SSF53254 13 227 1.7E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily MC28_2632 25d3324394535649eb37f77b01347f5d 236 SMART SM00855 14 188 9.1E-17 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 MC28_3797 953126076226878b75056d83952e45e9 149 Gene3D G3DSA:3.30.1380.20 1 147 1.8E-54 T 14-10-2018 MC28_3797 953126076226878b75056d83952e45e9 149 SUPERFAMILY SSF111126 16 128 3.35E-24 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily MC28_3797 953126076226878b75056d83952e45e9 149 Pfam PF10702 Protein of unknown function (DUF2507) 18 140 5.7E-49 T 14-10-2018 IPR019642 Protein of unknown function DUF2507 MC28_4114 08482cc593c3b71d44223dc3ced51a1f 200 Gene3D G3DSA:3.40.50.150 22 193 1.0E-18 T 14-10-2018 MC28_4114 08482cc593c3b71d44223dc3ced51a1f 200 SUPERFAMILY SSF53335 13 176 3.8E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4114 08482cc593c3b71d44223dc3ced51a1f 200 Pfam PF00398 Ribosomal RNA adenine dimethylase 33 152 1.1E-11 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm MC28_F267 c1e247818a42b6dd903046007d0c2abf 220 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 3 179 5.4E-35 T 14-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 MC28_F267 c1e247818a42b6dd903046007d0c2abf 220 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 28 2.2E-8 T 14-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal MC28_F267 c1e247818a42b6dd903046007d0c2abf 220 Gene3D G3DSA:3.30.70.2660 1 201 1.1E-77 T 14-10-2018 MC28_F267 c1e247818a42b6dd903046007d0c2abf 220 TIGRFAM TIGR01876 cas_Cas5d: CRISPR-associated protein Cas5, subtype I-C/DVULG 1 186 2.8E-74 T 14-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 MC28_F267 c1e247818a42b6dd903046007d0c2abf 220 PIRSF PIRSF029950 1 198 6.3E-55 T 14-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 MC28_0823 86b322b3f4adceb637c836bb1f637e48 1210 SUPERFAMILY SSF52540 23 252 1.33E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0823 86b322b3f4adceb637c836bb1f637e48 1210 SUPERFAMILY SSF52540 598 879 4.32E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0823 86b322b3f4adceb637c836bb1f637e48 1210 Pfam PF00350 Dynamin family 37 191 1.5E-30 T 14-10-2018 IPR022812 Dynamin superfamily MC28_0823 86b322b3f4adceb637c836bb1f637e48 1210 Pfam PF00350 Dynamin family 615 841 9.9E-47 T 14-10-2018 IPR022812 Dynamin superfamily MC28_0823 86b322b3f4adceb637c836bb1f637e48 1210 Gene3D G3DSA:3.40.50.300 37 270 3.1E-41 T 14-10-2018 MC28_5145 0691511340045038ee15d81808aa517f 254 Pfam PF14167 YfkD-like protein 23 252 7.2E-106 T 14-10-2018 IPR025548 YfkD-like protein MC28_3568 c5117199b3cf56eaed948d726cbc0041 263 Pfam PF06691 Protein of unknown function (DUF1189) 15 254 4.3E-66 T 14-10-2018 IPR009574 Protein of unknown function DUF1189 MC28_3352 279bfe472cb019ad1e9b60739e966de9 122 Gene3D G3DSA:3.40.630.30 18 117 5.6E-12 T 14-10-2018 MC28_3352 279bfe472cb019ad1e9b60739e966de9 122 Pfam PF00583 Acetyltransferase (GNAT) family 36 98 1.8E-8 T 14-10-2018 IPR000182 GNAT domain MC28_3352 279bfe472cb019ad1e9b60739e966de9 122 SUPERFAMILY SSF55729 6 97 4.42E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_F191 49d97581172d1ab9432acc713d7c5eb1 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 8 292 1.5E-151 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 MC28_F191 49d97581172d1ab9432acc713d7c5eb1 294 Pfam PF00483 Nucleotidyl transferase 8 244 4.8E-72 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 MC28_F191 49d97581172d1ab9432acc713d7c5eb1 294 Gene3D G3DSA:3.90.550.10 1 294 2.0E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_F191 49d97581172d1ab9432acc713d7c5eb1 294 SUPERFAMILY SSF53448 7 291 1.73E-92 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_3238 1822c454b55307ab35b9040c024dea02 151 SUPERFAMILY SSF50475 6 96 7.02E-11 T 14-10-2018 MC28_3238 1822c454b55307ab35b9040c024dea02 151 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 94 8.1E-9 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 MC28_3238 1822c454b55307ab35b9040c024dea02 151 Gene3D G3DSA:2.30.110.10 1 150 4.8E-61 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 MC28_2485 141d7ad5c2d38fe6c5c74f5e3547ac2b 187 Pfam PF12464 Maltose acetyltransferase 7 56 9.3E-15 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 MC28_2485 141d7ad5c2d38fe6c5c74f5e3547ac2b 187 Gene3D G3DSA:2.160.10.10 1 186 1.1E-75 T 14-10-2018 MC28_2485 141d7ad5c2d38fe6c5c74f5e3547ac2b 187 SUPERFAMILY SSF51161 1 185 2.36E-53 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_2485 141d7ad5c2d38fe6c5c74f5e3547ac2b 187 SMART SM01266 5 59 6.0E-19 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 MC28_2485 141d7ad5c2d38fe6c5c74f5e3547ac2b 187 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 MC28_2485 141d7ad5c2d38fe6c5c74f5e3547ac2b 187 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 87 111 0.16 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_2485 141d7ad5c2d38fe6c5c74f5e3547ac2b 187 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 131 166 7.6E-10 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_2324 938a5225b729af82294adb27dfac1de9 333 Gene3D G3DSA:3.90.1200.10 122 322 1.3E-10 T 14-10-2018 MC28_2324 938a5225b729af82294adb27dfac1de9 333 SUPERFAMILY SSF56112 38 291 4.52E-25 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_2324 938a5225b729af82294adb27dfac1de9 333 Pfam PF01636 Phosphotransferase enzyme family 65 254 1.8E-12 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_G056 09c3ab90ed4b3f63f03ae72a6772280d 417 Gene3D G3DSA:1.20.1250.20 16 411 1.3E-32 T 14-10-2018 MC28_G056 09c3ab90ed4b3f63f03ae72a6772280d 417 PRINTS PR01988 Putative bacilysin exporter bacE signature 183 200 1.4E-11 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_G056 09c3ab90ed4b3f63f03ae72a6772280d 417 PRINTS PR01988 Putative bacilysin exporter bacE signature 90 108 1.4E-11 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_G056 09c3ab90ed4b3f63f03ae72a6772280d 417 PRINTS PR01988 Putative bacilysin exporter bacE signature 272 289 1.4E-11 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_G056 09c3ab90ed4b3f63f03ae72a6772280d 417 PRINTS PR01988 Putative bacilysin exporter bacE signature 310 333 1.4E-11 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_G056 09c3ab90ed4b3f63f03ae72a6772280d 417 PRINTS PR01988 Putative bacilysin exporter bacE signature 156 177 1.4E-11 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_G056 09c3ab90ed4b3f63f03ae72a6772280d 417 PRINTS PR01988 Putative bacilysin exporter bacE signature 376 399 1.4E-11 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 MC28_G056 09c3ab90ed4b3f63f03ae72a6772280d 417 SUPERFAMILY SSF103473 21 414 1.44E-42 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_G056 09c3ab90ed4b3f63f03ae72a6772280d 417 Pfam PF05977 Transmembrane secretion effector 21 409 1.5E-30 T 14-10-2018 IPR010290 Transmembrane secretion effector MC28_2378 eb781512f1cbd475b9abb34fc8e86b31 223 Gene3D G3DSA:3.40.50.300 1 223 5.7E-71 T 14-10-2018 MC28_2378 eb781512f1cbd475b9abb34fc8e86b31 223 SMART SM00382 33 220 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_2378 eb781512f1cbd475b9abb34fc8e86b31 223 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_2378 eb781512f1cbd475b9abb34fc8e86b31 223 SUPERFAMILY SSF52540 4 222 5.59E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2378 eb781512f1cbd475b9abb34fc8e86b31 223 Pfam PF00005 ABC transporter 24 173 6.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 Pfam PF00230 Major intrinsic protein 2 212 1.3E-46 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 ProSitePatterns PS00221 MIP family signature. 59 67 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 SUPERFAMILY SSF81338 2 219 1.31E-57 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 PRINTS PR00783 Major intrinsic protein family signature 127 145 2.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 PRINTS PR00783 Major intrinsic protein family signature 3 22 2.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 PRINTS PR00783 Major intrinsic protein family signature 78 97 2.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 PRINTS PR00783 Major intrinsic protein family signature 41 65 2.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 PRINTS PR00783 Major intrinsic protein family signature 196 216 2.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 PRINTS PR00783 Major intrinsic protein family signature 157 179 2.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 MC28_3785 fef5e8cc74b48ba21db3bac871214db1 221 Gene3D G3DSA:1.20.1080.10 1 219 3.1E-64 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_4909 3502d0a2bf15c5b955e9c8ee95473182 121 SUPERFAMILY SSF159121 34 117 1.7E-18 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_4909 3502d0a2bf15c5b955e9c8ee95473182 121 Pfam PF06486 Protein of unknown function (DUF1093) 36 105 1.9E-12 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_4909 3502d0a2bf15c5b955e9c8ee95473182 121 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 6 117 1.8E-13 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_4909 3502d0a2bf15c5b955e9c8ee95473182 121 Gene3D G3DSA:2.40.50.480 32 118 3.1E-19 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_1900 c5853eca4296b3e45a42ed490220e4e2 173 Gene3D G3DSA:1.20.120.450 1 173 1.1E-50 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1900 c5853eca4296b3e45a42ed490220e4e2 173 Pfam PF12867 DinB superfamily 29 164 9.0E-14 T 14-10-2018 IPR024775 DinB-like domain MC28_1900 c5853eca4296b3e45a42ed490220e4e2 173 Hamap MF_01256 Putative metal-dependent hydrolase . 2 173 40.766 T 14-10-2018 IPR023774 Putative metal-dependent hydrolase YfiT MC28_1900 c5853eca4296b3e45a42ed490220e4e2 173 SUPERFAMILY SSF109854 3 173 1.37E-49 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_G329 725f8932c437797f9192f5b2f52a1be3 174 Pfam PF07366 SnoaL-like polyketide cyclase 58 165 1.1E-23 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 MC28_G329 725f8932c437797f9192f5b2f52a1be3 174 Gene3D G3DSA:3.10.450.50 48 174 1.7E-44 T 14-10-2018 MC28_G329 725f8932c437797f9192f5b2f52a1be3 174 SUPERFAMILY SSF54427 53 164 1.91E-29 T 14-10-2018 IPR032710 NTF2-like domain superfamily MC28_3022 c55acc4037805e60317ee72f9b09f1ef 136 Gene3D G3DSA:1.10.260.40 3 135 7.0E-20 T 14-10-2018 MC28_3022 c55acc4037805e60317ee72f9b09f1ef 136 SMART SM00530 6 61 1.1E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3022 c55acc4037805e60317ee72f9b09f1ef 136 SUPERFAMILY SSF47413 1 65 1.21E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3022 c55acc4037805e60317ee72f9b09f1ef 136 Pfam PF01381 Helix-turn-helix 7 61 2.9E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_F038 299a65085cb5ea8504851f74037d16f3 187 Pfam PF13411 MerR HTH family regulatory protein 8 70 2.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_F038 299a65085cb5ea8504851f74037d16f3 187 SUPERFAMILY SSF46955 7 76 4.58E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_F038 299a65085cb5ea8504851f74037d16f3 187 Gene3D G3DSA:1.10.1660.10 7 70 7.0E-15 T 14-10-2018 MC28_2264 dcdf2cf664eebe47e2841c9771a1b3c4 315 Pfam PF06166 Protein of unknown function (DUF979) 3 313 5.1E-124 T 14-10-2018 IPR009323 Protein of unknown function DUF979 MC28_5102 a15868b38f94038865e92d92cb5eb77b 437 PIRSF PIRSF004539 1 437 1.1E-192 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 MC28_5102 a15868b38f94038865e92d92cb5eb77b 437 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 369 1.6E-158 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 MC28_5102 a15868b38f94038865e92d92cb5eb77b 437 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 436 2.9E-173 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 MC28_5043 8502a1c6abbf804178e118c249008522 162 Pfam PF11611 Domain of unknown function (DUF4352) 40 147 1.9E-11 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 MC28_5043 8502a1c6abbf804178e118c249008522 162 Gene3D G3DSA:2.60.40.1240 39 161 5.9E-16 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily MC28_2308 cab165aa5056e6f6fe421fff936e7c67 128 Pfam PF11181 Heat induced stress protein YflT 36 108 1.7E-22 T 14-10-2018 IPR025889 General stress protein 17M-like domain MC28_F181 1b1350fb626fdef9c7787b0f6566b4a0 388 Gene3D G3DSA:3.40.1710.10 44 176 1.6E-5 T 14-10-2018 MC28_F181 1b1350fb626fdef9c7787b0f6566b4a0 388 Pfam PF12698 ABC-2 family transporter protein 24 379 9.8E-41 T 14-10-2018 MC28_1440 9a2b4c7d661a3a9bddf169d33c460aaf 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 294 4.5E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_1440 9a2b4c7d661a3a9bddf169d33c460aaf 339 Gene3D G3DSA:1.10.3720.10 70 306 1.5E-10 T 14-10-2018 IPR035906 MetI-like superfamily MC28_1440 9a2b4c7d661a3a9bddf169d33c460aaf 339 SUPERFAMILY SSF161098 26 226 4.14E-10 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0043 8560898a6c1e19ed4a67fd15dcf84d59 472 Pfam PF04293 SpoVR like protein 7 410 1.0E-163 T 14-10-2018 IPR007390 Sporulation stage V, protein R MC28_3064 e183c6e369332ceb255df14dd10c040f 244 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 244 116.537 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MC28_3064 e183c6e369332ceb255df14dd10c040f 244 Gene3D G3DSA:1.10.1270.20 166 244 2.4E-35 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MC28_3064 e183c6e369332ceb255df14dd10c040f 244 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 1.8E-104 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MC28_3064 e183c6e369332ceb255df14dd10c040f 244 SUPERFAMILY SSF75217 1 243 7.85E-106 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases MC28_3064 e183c6e369332ceb255df14dd10c040f 244 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 7.9E-75 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MC28_3064 e183c6e369332ceb255df14dd10c040f 244 PIRSF PIRSF000386 1 244 1.5E-107 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MC28_3064 e183c6e369332ceb255df14dd10c040f 244 Gene3D G3DSA:3.40.1280.10 1 165 4.6E-71 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MC28_3133 d17f58a36e80f0517a268955385079ef 363 Pfam PF01098 Cell cycle protein 9 362 8.3E-126 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3133 d17f58a36e80f0517a268955385079ef 363 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 6 360 1.1E-131 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3133 d17f58a36e80f0517a268955385079ef 363 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 319 343 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3133 d17f58a36e80f0517a268955385079ef 363 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 6 359 2.2E-173 T 14-10-2018 IPR013438 Sporulation stage V, protein E MC28_5257 ec4ea71dd49272603d90cc30bfafd7f2 263 Pfam PF06182 ABC-2 family transporter protein 31 258 9.8E-22 T 14-10-2018 IPR010390 Protein of unknown function DUF990 MC28_F092 85d4ccaa2f9d95551e3a74e48c80de9c 301 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 298 1.3E-67 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA MC28_F092 85d4ccaa2f9d95551e3a74e48c80de9c 301 Pfam PF12784 PD-(D/E)XK nuclease family transposase 9 243 1.4E-65 T 14-10-2018 MC28_5433 5d5722e17610e4b0b763579af4dcfa37 490 Pfam PF00474 Sodium:solute symporter family 34 427 5.4E-24 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 MC28_5433 5d5722e17610e4b0b763579af4dcfa37 490 Gene3D G3DSA:1.20.1730.10 19 490 2.0E-36 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily MC28_G392 63bc159fa91e441006ffae2f1385b75e 162 Pfam PF14470 Bacterial PH domain 60 157 5.5E-5 T 14-10-2018 IPR039519 YokE-like, PH domain MC28_G341 f0f3991b5ddd76ef4752cf8519900523 415 Pfam PF17289 Terminase RNaseH-like domain 310 398 3.5E-6 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like MC28_G341 f0f3991b5ddd76ef4752cf8519900523 415 Pfam PF03237 Terminase-like family 7 228 2.0E-13 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type MC28_G341 f0f3991b5ddd76ef4752cf8519900523 415 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 259 398 4.6E-20 T 14-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit MC28_F171 26d179c1f5110ebb447b5ab441817206 458 Pfam PF05525 Branched-chain amino acid transport protein 25 450 6.1E-152 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_F171 26d179c1f5110ebb447b5ab441817206 458 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 31 436 5.3E-141 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_5192 b5e15e01dbd263a5ac902ab6ec62bbf0 103 Pfam PF05119 Phage terminase, small subunit 13 82 1.8E-6 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family MC28_0084 f9bd7981d6ea39a61e1c81251456d2f4 259 SUPERFAMILY SSF158430 125 258 5.62E-42 T 14-10-2018 MC28_0084 f9bd7981d6ea39a61e1c81251456d2f4 259 Gene3D G3DSA:1.20.1260.120 1 259 6.8E-101 T 14-10-2018 MC28_0084 f9bd7981d6ea39a61e1c81251456d2f4 259 Pfam PF11155 Domain of unknown function (DUF2935) 127 245 5.5E-27 T 14-10-2018 IPR021328 Protein of unknown function DUF2935 MC28_0084 f9bd7981d6ea39a61e1c81251456d2f4 259 Pfam PF11155 Domain of unknown function (DUF2935) 8 114 4.1E-20 T 14-10-2018 IPR021328 Protein of unknown function DUF2935 MC28_0084 f9bd7981d6ea39a61e1c81251456d2f4 259 SUPERFAMILY SSF158430 4 122 8.24E-35 T 14-10-2018 MC28_1314 724105e690330d2f9b9d066d96706702 230 Pfam PF13130 Domain of unknown function (DUF3952) 10 113 2.8E-47 T 14-10-2018 IPR025019 Domain of unknown function DUF3952 MC28_5168 bfa26bee8ab645b7a3f32adfc85ca4ce 57 Pfam PF13128 Protein of unknown function (DUF3954) 5 53 9.9E-32 T 14-10-2018 IPR025017 Protein of unknown function DUF3954 MC28_3674 06061bb7485143030dee21447c493ae4 213 SUPERFAMILY SSF53335 3 212 5.98E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3674 06061bb7485143030dee21447c493ae4 213 Gene3D G3DSA:3.40.50.150 1 212 8.1E-64 T 14-10-2018 MC28_3674 06061bb7485143030dee21447c493ae4 213 Pfam PF01596 O-methyltransferase 40 211 2.0E-35 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 MC28_1156 291cce967c6fe9e0c1deb96150e584d5 204 Pfam PF00881 Nitroreductase family 14 183 7.1E-20 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_1156 291cce967c6fe9e0c1deb96150e584d5 204 SUPERFAMILY SSF55469 9 203 7.2E-72 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_1156 291cce967c6fe9e0c1deb96150e584d5 204 Gene3D G3DSA:3.40.109.10 7 204 2.1E-90 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_2642 a9ff2e7d111a12e5537f8546897d727a 330 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 25 302 5.1E-52 T 14-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 MC28_0711 13c33bdd85c5666f76247c01b2359d98 243 SMART SM00862 161 238 2.1E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_0711 13c33bdd85c5666f76247c01b2359d98 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 238 9.5E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_0711 13c33bdd85c5666f76247c01b2359d98 243 Gene3D G3DSA:3.40.50.2300 1 132 1.1E-40 T 14-10-2018 MC28_0711 13c33bdd85c5666f76247c01b2359d98 243 SUPERFAMILY SSF52172 5 129 9.53E-43 T 14-10-2018 IPR011006 CheY-like superfamily MC28_0711 13c33bdd85c5666f76247c01b2359d98 243 Gene3D G3DSA:1.10.10.10 141 242 2.7E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0711 13c33bdd85c5666f76247c01b2359d98 243 Pfam PF00072 Response regulator receiver domain 12 120 2.5E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0711 13c33bdd85c5666f76247c01b2359d98 243 SUPERFAMILY SSF46894 138 239 2.02E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_0711 13c33bdd85c5666f76247c01b2359d98 243 SMART SM00448 10 120 3.0E-46 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_0778 a25ff1c28bf9d2c7d61b882b45d36440 173 SUPERFAMILY SSF54403 33 94 5.61E-16 T 14-10-2018 MC28_0778 a25ff1c28bf9d2c7d61b882b45d36440 173 Gene3D G3DSA:3.10.450.40 23 93 2.4E-21 T 14-10-2018 MC28_0778 a25ff1c28bf9d2c7d61b882b45d36440 173 Gene3D G3DSA:3.10.450.40 94 171 3.6E-17 T 14-10-2018 MC28_0778 a25ff1c28bf9d2c7d61b882b45d36440 173 SUPERFAMILY SSF54403 94 170 5.1E-12 T 14-10-2018 MC28_4735 45343f5a39805b5783ec9e131ac3c44c 211 SUPERFAMILY SSF52540 5 205 1.49E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4735 45343f5a39805b5783ec9e131ac3c44c 211 Pfam PF01712 Deoxynucleoside kinase 7 204 3.5E-45 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain MC28_4735 45343f5a39805b5783ec9e131ac3c44c 211 Gene3D G3DSA:3.40.50.300 5 207 3.1E-46 T 14-10-2018 MC28_4735 45343f5a39805b5783ec9e131ac3c44c 211 PIRSF PIRSF000705 2 210 7.5E-56 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 MC28_1693 cfb38685b06a53341b0c054cce500257 269 Gene3D G3DSA:2.30.30.40 36 105 5.4E-6 T 14-10-2018 MC28_1693 cfb38685b06a53341b0c054cce500257 269 Gene3D G3DSA:3.90.70.10 124 266 2.2E-8 T 14-10-2018 MC28_1693 cfb38685b06a53341b0c054cce500257 269 Pfam PF12385 Papain-like cysteine protease AvrRpt2 114 255 8.0E-39 T 14-10-2018 IPR022118 Peptidase C70, AvrRpt2 MC28_2388 708a195387e9e2a932064d30659a2723 125 Gene3D G3DSA:3.10.129.10 1 124 7.0E-19 T 14-10-2018 MC28_2388 708a195387e9e2a932064d30659a2723 125 SUPERFAMILY SSF54637 3 122 6.79E-17 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_G121 b085996bd9d722ba2c67752ba98d1466 390 Gene3D G3DSA:1.10.443.10 193 386 4.6E-31 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_G121 b085996bd9d722ba2c67752ba98d1466 390 SUPERFAMILY SSF56349 82 372 4.71E-35 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_G121 b085996bd9d722ba2c67752ba98d1466 390 Gene3D G3DSA:1.10.150.130 65 192 1.2E-6 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_G121 b085996bd9d722ba2c67752ba98d1466 390 Pfam PF00589 Phage integrase family 198 374 2.5E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_2791 e54eb75e07d3e18af7e0e7020627d488 375 SUPERFAMILY SSF51395 25 367 8.55E-111 T 14-10-2018 MC28_2791 e54eb75e07d3e18af7e0e7020627d488 375 Gene3D G3DSA:3.20.20.70 21 373 8.4E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_2791 e54eb75e07d3e18af7e0e7020627d488 375 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 30 359 7.4E-88 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 MC28_4681 4223fb9c4b406a287e76670e636fdc81 196 Pfam PF02293 AmiS/UreI family transporter 1 164 2.0E-49 T 14-10-2018 IPR003211 AmiS/UreI transporter GO:0016020 MC28_4681 4223fb9c4b406a287e76670e636fdc81 196 Gene3D G3DSA:1.25.40.600 1 167 5.4E-39 T 14-10-2018 IPR038523 AmiS/UreI transporter superfamily MC28_2628 cf6cad4bf5cb8c610ba784846d043adc 158 Pfam PF10901 Protein of unknown function (DUF2690) 35 139 1.1E-35 T 14-10-2018 IPR021224 Protein of unknown function DUF2690 MC28_1638 f53c5d555c0f716cc6d3d1ab93768617 61 Pfam PF14169 Cold-inducible protein YdjO 4 60 2.2E-28 T 14-10-2018 IPR025916 Cold-inducible protein YdjO MC28_0662 2fde7b218901a33501bd9aecb541ccf2 66 Pfam PF13046 Protein of unknown function (DUF3906) 1 64 2.1E-31 T 14-10-2018 IPR024998 Protein of unknown function DUF3906 MC28_G088 125390b443e13f84995ed90e50b00e26 171 SUPERFAMILY SSF52833 59 147 1.37E-8 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_G088 125390b443e13f84995ed90e50b00e26 171 Pfam PF13098 Thioredoxin-like domain 61 148 1.1E-7 T 14-10-2018 IPR012336 Thioredoxin-like fold MC28_G088 125390b443e13f84995ed90e50b00e26 171 Gene3D G3DSA:3.40.30.10 41 168 1.8E-8 T 14-10-2018 MC28_0360 8e120f1edbc6663b406b14526c99f4da 74 Pfam PF10676 Spore germination protein gerPA/gerPF 4 72 2.5E-24 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF MC28_1434 2fe8ed12a318d07f08293bd5b80e2055 149 SUPERFAMILY SSF55811 15 142 2.84E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_1434 2fe8ed12a318d07f08293bd5b80e2055 149 Pfam PF00293 NUDIX domain 19 143 1.2E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_1434 2fe8ed12a318d07f08293bd5b80e2055 149 Gene3D G3DSA:3.90.79.10 1 147 7.7E-36 T 14-10-2018 MC28_1434 2fe8ed12a318d07f08293bd5b80e2055 149 PRINTS PR00502 NUDIX hydrolase family signature 42 56 4.7E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_1434 2fe8ed12a318d07f08293bd5b80e2055 149 PRINTS PR00502 NUDIX hydrolase family signature 56 71 4.7E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_3582 9e580430ba072fb661941b6be416f979 235 Gene3D G3DSA:3.40.50.150 1 163 3.5E-53 T 14-10-2018 MC28_3582 9e580430ba072fb661941b6be416f979 235 SUPERFAMILY SSF53335 12 144 1.66E-7 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3582 9e580430ba072fb661941b6be416f979 235 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 231 6.0E-71 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 MC28_3582 9e580430ba072fb661941b6be416f979 235 PIRSF PIRSF018637 4 235 1.6E-82 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 MC28_4366 bebc9639828e85008f4beecee24b684f 300 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 1 289 4.1E-51 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain MC28_4366 bebc9639828e85008f4beecee24b684f 300 Gene3D G3DSA:3.90.245.10 1 298 8.2E-59 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_4366 bebc9639828e85008f4beecee24b684f 300 SUPERFAMILY SSF53590 1 295 3.53E-66 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like MC28_1397 38583edaf1c27d9a195d073b085d5454 257 Pfam PF10997 Alternate to MurJ 3 252 9.5E-94 T 14-10-2018 IPR021260 Lipid II flippase Amj MC28_1397 38583edaf1c27d9a195d073b085d5454 257 Hamap MF_02077 Lipid II flippase Amj [amj]. 1 254 24.428 T 14-10-2018 IPR021260 Lipid II flippase Amj MC28_5064 6eb1c7db5024869453013653860be037 334 SUPERFAMILY SSF81345 5 332 1.44E-77 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_5064 6eb1c7db5024869453013653860be037 334 Gene3D G3DSA:1.10.3470.10 5 334 1.2E-89 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_5064 6eb1c7db5024869453013653860be037 334 Pfam PF01032 FecCD transport family 19 332 1.5E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_5064 6eb1c7db5024869453013653860be037 334 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 3.9E-6 T 14-10-2018 MC28_5064 6eb1c7db5024869453013653860be037 334 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 3.9E-6 T 14-10-2018 MC28_5064 6eb1c7db5024869453013653860be037 334 PRINTS PR00173 Glutamate-aspartate symporter signature 54 74 3.9E-6 T 14-10-2018 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 Gene3D G3DSA:3.40.50.1980 14 213 6.7E-126 T 14-10-2018 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 17 408 8.0E-168 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 Pfam PF00815 Histidinol dehydrogenase 10 409 1.3E-173 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 PIRSF PIRSF000099 1 412 2.2E-181 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 Gene3D G3DSA:3.40.50.1980 215 331 6.7E-126 T 14-10-2018 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 409 42.848 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 SUPERFAMILY SSF53720 12 409 3.53E-82 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 PRINTS PR00083 Histidinol dehydrogenase signature 182 207 2.2E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 PRINTS PR00083 Histidinol dehydrogenase signature 211 232 2.2E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 PRINTS PR00083 Histidinol dehydrogenase signature 343 361 2.2E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 PRINTS PR00083 Histidinol dehydrogenase signature 152 178 2.2E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 PRINTS PR00083 Histidinol dehydrogenase signature 302 327 2.2E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 PRINTS PR00083 Histidinol dehydrogenase signature 118 144 2.2E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 PRINTS PR00083 Histidinol dehydrogenase signature 17 41 2.2E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 PRINTS PR00083 Histidinol dehydrogenase signature 233 252 2.2E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 MC28_0643 7318981c86fab9672591d3ca07936e3f 413 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 211 243 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 MC28_5150 616fbb95ad5c707674973e0c4e06da7f 291 Gene3D G3DSA:1.10.1670.40 239 288 3.4E-48 T 14-10-2018 MC28_5150 616fbb95ad5c707674973e0c4e06da7f 291 Gene3D G3DSA:1.10.340.30 120 238 3.4E-48 T 14-10-2018 MC28_5150 616fbb95ad5c707674973e0c4e06da7f 291 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 128 265 4.3E-17 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 MC28_5150 616fbb95ad5c707674973e0c4e06da7f 291 SUPERFAMILY SSF48150 118 288 1.92E-36 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 MC28_5150 616fbb95ad5c707674973e0c4e06da7f 291 SMART SM00478 131 290 3.1E-10 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 MC28_4276 3e7bfc185c2f3f50ed8eaf5af27d7d40 301 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 87 98 1.1E-7 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_4276 3e7bfc185c2f3f50ed8eaf5af27d7d40 301 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 164 177 1.1E-7 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_4276 3e7bfc185c2f3f50ed8eaf5af27d7d40 301 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 154 1.1E-7 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MC28_4276 3e7bfc185c2f3f50ed8eaf5af27d7d40 301 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 53 279 1.4E-44 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MC28_4276 3e7bfc185c2f3f50ed8eaf5af27d7d40 301 Gene3D G3DSA:3.40.710.10 40 301 3.5E-67 T 14-10-2018 MC28_4276 3e7bfc185c2f3f50ed8eaf5af27d7d40 301 SUPERFAMILY SSF56601 22 299 3.55E-51 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_4741 e7ea400c70f71f993214a08e97155295 73 Pfam PF10704 Protein of unknown function (DUF2508) 1 69 2.1E-27 T 14-10-2018 IPR019644 Protein of unknown function DUF2508 MC28_3676 c6a9e875e0a316eaf11452e4388e0965 92 Pfam PF06949 Protein of unknown function (DUF1292) 11 87 2.7E-16 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 MC28_3676 c6a9e875e0a316eaf11452e4388e0965 92 Hamap MF_01448 UPF0473 protein . 2 88 19.383 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 MC28_0515 81f017c480b2c5e351242aac23975ad2 327 SUPERFAMILY SSF52540 4 241 1.61E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0515 81f017c480b2c5e351242aac23975ad2 327 Pfam PF00005 ABC transporter 23 162 4.5E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0515 81f017c480b2c5e351242aac23975ad2 327 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0515 81f017c480b2c5e351242aac23975ad2 327 Gene3D G3DSA:3.40.50.300 1 239 9.0E-78 T 14-10-2018 MC28_0515 81f017c480b2c5e351242aac23975ad2 327 Pfam PF08402 TOBE domain 248 325 2.0E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 MC28_0515 81f017c480b2c5e351242aac23975ad2 327 SUPERFAMILY SSF50331 239 326 5.61E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal MC28_0515 81f017c480b2c5e351242aac23975ad2 327 SMART SM00382 29 212 9.7E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_G149 db5d78a06059faed42b35607d9abc9ff 264 SUPERFAMILY SSF46785 5 100 1.35E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_G149 db5d78a06059faed42b35607d9abc9ff 264 Gene3D G3DSA:1.10.10.10 4 105 1.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G149 db5d78a06059faed42b35607d9abc9ff 264 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 11 79 4.2E-23 T 14-10-2018 IPR002831 Transcription regulator TrmB, N-terminal MC28_3569 851a6509097ceb06e179504b02f0469a 120 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 4 119 4.0E-42 T 14-10-2018 IPR020506 Uncharacterised protein family YqfZ MC28_1780 24f035ddf4647ca0520b240df0a52585 312 SUPERFAMILY SSF103481 46 141 2.75E-10 T 14-10-2018 MC28_1780 24f035ddf4647ca0520b240df0a52585 312 SUPERFAMILY SSF103481 211 297 1.96E-12 T 14-10-2018 MC28_1780 24f035ddf4647ca0520b240df0a52585 312 Pfam PF00892 EamA-like transporter family 152 294 3.4E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_1780 24f035ddf4647ca0520b240df0a52585 312 Pfam PF00892 EamA-like transporter family 6 139 3.3E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_F160 6199380363dcd9ef8277cf1ac13513c4 219 Pfam PF04203 Sortase family 94 215 1.8E-25 T 14-10-2018 IPR005754 Sortase family MC28_F160 6199380363dcd9ef8277cf1ac13513c4 219 Gene3D G3DSA:2.40.260.10 77 217 4.7E-41 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_F160 6199380363dcd9ef8277cf1ac13513c4 219 SUPERFAMILY SSF63817 26 215 1.57E-33 T 14-10-2018 IPR023365 Sortase domain superfamily MC28_F160 6199380363dcd9ef8277cf1ac13513c4 219 TIGRFAM TIGR01076 sortase_fam: sortase 91 212 5.5E-23 T 14-10-2018 IPR005754 Sortase family MC28_G242 d51f8f70fc7ea9f1aff66664903dfb96 259 SUPERFAMILY SSF46955 40 110 2.38E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_G242 d51f8f70fc7ea9f1aff66664903dfb96 259 Gene3D G3DSA:1.10.1660.10 25 165 7.4E-8 T 14-10-2018 MC28_G242 d51f8f70fc7ea9f1aff66664903dfb96 259 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 38 71 2.6E-4 T 14-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 MC28_1244 f3124d1d18248b3e0363ac44be1d97d4 156 SUPERFAMILY SSF55729 1 142 1.38E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1244 f3124d1d18248b3e0363ac44be1d97d4 156 Gene3D G3DSA:3.40.630.30 44 145 3.5E-24 T 14-10-2018 MC28_1244 f3124d1d18248b3e0363ac44be1d97d4 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 129 7.9E-16 T 14-10-2018 IPR000182 GNAT domain MC28_1244 f3124d1d18248b3e0363ac44be1d97d4 156 Gene3D G3DSA:1.10.287.900 1 42 3.6E-6 T 14-10-2018 IPR027455 Spermine/spermidine acetyltransferase, N-terminal KEGG: 00330+2.3.1.57|MetaCyc: PWY-0|MetaCyc: PWY-6117|MetaCyc: PWY-6922 MC28_4211 771bd0c9936cd0ecc4be7b7bba9f4746 264 Pfam PF10947 Protein of unknown function (DUF2628) 25 118 5.4E-23 T 14-10-2018 IPR024399 Protein of unknown function DUF2628 MC28_3236 420b53dacec65ddfdcf46b58d3b9cd9b 165 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 4 164 7.0E-87 T 14-10-2018 IPR020229 Uncharacterised protein YlaL MC28_F099 2f66a688017710ab544581a8a0d9e02f 416 Pfam PF05569 BlaR1 peptidase M56 31 232 4.8E-50 T 14-10-2018 IPR008756 Peptidase M56 MC28_F099 2f66a688017710ab544581a8a0d9e02f 416 Gene3D G3DSA:3.30.2010.10 69 156 4.0E-5 T 14-10-2018 MC28_2933 abb2a5f2511361684be2b881f105c90c 445 PIRSF PIRSF038984 117 444 1.7E-10 T 14-10-2018 IPR028348 FAD dependent protein MC28_2933 abb2a5f2511361684be2b881f105c90c 445 PIRSF PIRSF038984 2 91 0.016 T 14-10-2018 IPR028348 FAD dependent protein MC28_2933 abb2a5f2511361684be2b881f105c90c 445 SUPERFAMILY SSF51905 1 442 2.83E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2933 abb2a5f2511361684be2b881f105c90c 445 Gene3D G3DSA:3.50.50.60 109 220 6.4E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_2933 abb2a5f2511361684be2b881f105c90c 445 Gene3D G3DSA:3.50.50.60 1 102 1.2E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_0609 ee41c2ffbdbbd18fce48911b8f31f43d 48 Pfam PF12459 D-Ala-teichoic acid biosynthesis protein 6 48 3.5E-20 T 14-10-2018 IPR021008 Protein of unknown function DUF3687 MC28_4668 77adf90055c2b1f2d383a5ba9d8bf1e2 290 Gene3D G3DSA:1.10.357.10 1 157 1.7E-29 T 14-10-2018 MC28_4668 77adf90055c2b1f2d383a5ba9d8bf1e2 290 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 1.3E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_4668 77adf90055c2b1f2d383a5ba9d8bf1e2 290 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MC28_4668 77adf90055c2b1f2d383a5ba9d8bf1e2 290 SUPERFAMILY SSF46689 3 69 8.21E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 MC28_4668 77adf90055c2b1f2d383a5ba9d8bf1e2 290 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_4668 77adf90055c2b1f2d383a5ba9d8bf1e2 290 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MC28_0482 ea3089be50e63ef8c5a909440fac9506 603 TIGRFAM TIGR03693 ocin_ThiF_like: putative thiazole-containing bacteriocin maturation protein 1 601 0.0 T 14-10-2018 IPR022368 Putative thiazole-containing bacteriocin maturation protein MC28_0482 ea3089be50e63ef8c5a909440fac9506 603 Gene3D G3DSA:3.40.50.720 140 295 4.5E-10 T 14-10-2018 MC28_F169 fe74dc78d73c9a485ae1b0516cd3b62d 497 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 30 484 3.4E-166 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_F169 fe74dc78d73c9a485ae1b0516cd3b62d 497 PIRSF PIRSF005690 11 496 4.3E-167 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_5148 e71ad9a732cbc55a71fe0a6328b2c2ff 525 Pfam PF05683 Fumarase C-terminus 308 507 3.8E-63 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 MC28_5148 e71ad9a732cbc55a71fe0a6328b2c2ff 525 PIRSF PIRSF001394 11 524 8.9E-200 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 MC28_5148 e71ad9a732cbc55a71fe0a6328b2c2ff 525 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 344 505 1.4E-51 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 MC28_5148 e71ad9a732cbc55a71fe0a6328b2c2ff 525 Gene3D G3DSA:3.20.130.10 318 506 1.4E-65 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 MC28_5148 e71ad9a732cbc55a71fe0a6328b2c2ff 525 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 24 299 2.7E-60 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 MC28_5148 e71ad9a732cbc55a71fe0a6328b2c2ff 525 SUPERFAMILY SSF117457 335 505 4.97E-53 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 MC28_5148 e71ad9a732cbc55a71fe0a6328b2c2ff 525 Pfam PF05681 Fumarate hydratase (Fumerase) 25 301 2.5E-70 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 MC28_0430 8aa8fef1e77ca3e6b24844e68d71a3b2 250 Gene3D G3DSA:3.40.50.150 23 225 9.4E-29 T 14-10-2018 MC28_0430 8aa8fef1e77ca3e6b24844e68d71a3b2 250 SUPERFAMILY SSF53335 24 232 5.09E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0430 8aa8fef1e77ca3e6b24844e68d71a3b2 250 Pfam PF08241 Methyltransferase domain 48 163 3.2E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_4121 fba83cd7d2108843f3cc3beb978be5fd 90 Gene3D G3DSA:1.10.10.10 1 89 2.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4121 fba83cd7d2108843f3cc3beb978be5fd 90 SUPERFAMILY SSF46785 3 82 8.51E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4121 fba83cd7d2108843f3cc3beb978be5fd 90 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 5.3E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_4121 fba83cd7d2108843f3cc3beb978be5fd 90 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 5.3E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_4121 fba83cd7d2108843f3cc3beb978be5fd 90 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 5.3E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_4121 fba83cd7d2108843f3cc3beb978be5fd 90 SMART SM00418 3 81 2.3E-30 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_4121 fba83cd7d2108843f3cc3beb978be5fd 90 Pfam PF01022 Bacterial regulatory protein, arsR family 10 55 3.7E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MC28_2625 1b485c75352f1d6600d335ff6a8d470b 345 Pfam PF13170 Protein of unknown function (DUF4003) 32 325 1.2E-100 T 14-10-2018 IPR025062 Protein of unknown function DUF4003 MC28_5359 8290ec6d83a1e6b22b6e92539e938e35 368 Pfam PF03845 Spore germination protein 7 319 1.1E-56 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_5359 8290ec6d83a1e6b22b6e92539e938e35 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 360 2.0E-54 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_5359 8290ec6d83a1e6b22b6e92539e938e35 368 Gene3D G3DSA:1.20.1740.10 2 367 1.0E-9 T 14-10-2018 MC28_1916 0f6edb77592825a2d116283148795655 122 Pfam PF13788 Domain of unknown function (DUF4180) 10 118 1.4E-43 T 14-10-2018 IPR025438 Domain of unknown function DUF4180 MC28_1725 03d51122e5ddaa397ada91b629735aac 241 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_1725 03d51122e5ddaa397ada91b629735aac 241 SUPERFAMILY SSF52540 4 223 1.08E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1725 03d51122e5ddaa397ada91b629735aac 241 SMART SM00382 30 209 9.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1725 03d51122e5ddaa397ada91b629735aac 241 Pfam PF00005 ABC transporter 21 162 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_1725 03d51122e5ddaa397ada91b629735aac 241 Gene3D G3DSA:3.40.50.300 1 236 1.6E-66 T 14-10-2018 MC28_2621 5061d467b216778c40639230caeea17a 302 SUPERFAMILY SSF53807 40 300 8.63E-47 T 14-10-2018 MC28_2621 5061d467b216778c40639230caeea17a 302 Gene3D G3DSA:3.40.50.1980 24 145 8.8E-17 T 14-10-2018 MC28_2621 5061d467b216778c40639230caeea17a 302 Gene3D G3DSA:3.40.50.1980 147 302 8.5E-37 T 14-10-2018 MC28_2621 5061d467b216778c40639230caeea17a 302 Pfam PF01497 Periplasmic binding protein 51 279 1.9E-30 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_4496 1ada697e3b7da5bb1d83700cda66bde9 324 SUPERFAMILY SSF103481 220 307 4.32E-8 T 14-10-2018 MC28_4496 1ada697e3b7da5bb1d83700cda66bde9 324 SUPERFAMILY SSF103481 80 157 3.4E-9 T 14-10-2018 MC28_4496 1ada697e3b7da5bb1d83700cda66bde9 324 Pfam PF00892 EamA-like transporter family 7 154 8.6E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_4496 1ada697e3b7da5bb1d83700cda66bde9 324 Pfam PF00892 EamA-like transporter family 168 307 5.2E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_4308 4ea8f6c1efd3b829467c550bc079e222 144 Pfam PF13058 Protein of unknown function (DUF3920) 17 142 4.7E-70 T 14-10-2018 IPR025033 Protein of unknown function DUF3920 MC28_F217 d5467d9846ae832925eb6a587e89781b 94 Pfam PF07883 Cupin domain 22 73 1.8E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_F217 d5467d9846ae832925eb6a587e89781b 94 SUPERFAMILY SSF51182 5 87 2.51E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_F217 d5467d9846ae832925eb6a587e89781b 94 Gene3D G3DSA:2.60.120.10 1 92 6.6E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_5129 9b19cfb9695ebf9ffa45f1dfaf7c9b75 360 Pfam PF05816 Toxic anion resistance protein (TelA) 31 359 7.1E-102 T 14-10-2018 IPR008863 Toxic anion resistance MC28_5129 9b19cfb9695ebf9ffa45f1dfaf7c9b75 360 PIRSF PIRSF026508 1 360 3.1E-125 T 14-10-2018 IPR008863 Toxic anion resistance MC28_2392 db4d7268336a8b1b2e849467faa176cd 52 Pfam PF04070 Domain of unknown function (DUF378) 1 45 3.3E-12 T 14-10-2018 IPR007211 Protein of unknown function DUF378 MC28_1618 68ef15652ac2785e98cfd1d531b949ae 237 SMART SM00862 153 229 4.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1618 68ef15652ac2785e98cfd1d531b949ae 237 SUPERFAMILY SSF52172 2 122 2.99E-45 T 14-10-2018 IPR011006 CheY-like superfamily MC28_1618 68ef15652ac2785e98cfd1d531b949ae 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 1.3E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_1618 68ef15652ac2785e98cfd1d531b949ae 237 Gene3D G3DSA:1.10.10.10 125 234 4.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_1618 68ef15652ac2785e98cfd1d531b949ae 237 SMART SM00448 3 113 2.7E-51 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1618 68ef15652ac2785e98cfd1d531b949ae 237 SUPERFAMILY SSF46894 135 231 4.25E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_1618 68ef15652ac2785e98cfd1d531b949ae 237 Pfam PF00072 Response regulator receiver domain 5 113 2.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_1618 68ef15652ac2785e98cfd1d531b949ae 237 Gene3D G3DSA:3.40.50.2300 1 124 1.3E-42 T 14-10-2018 MC28_4447 fde73a8cd347fa9b0b7a3260750a6c28 123 SUPERFAMILY SSF56276 5 117 7.06E-39 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 MC28_4447 fde73a8cd347fa9b0b7a3260750a6c28 123 Pfam PF02675 S-adenosylmethionine decarboxylase 9 115 2.2E-35 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 MC28_4447 fde73a8cd347fa9b0b7a3260750a6c28 123 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 5 115 6.7E-43 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 MC28_4447 fde73a8cd347fa9b0b7a3260750a6c28 123 Gene3D G3DSA:3.30.160.750 65 122 1.3E-20 T 14-10-2018 MC28_4447 fde73a8cd347fa9b0b7a3260750a6c28 123 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 3 119 29.622 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 MC28_4447 fde73a8cd347fa9b0b7a3260750a6c28 123 Gene3D G3DSA:3.30.360.110 3 64 1.6E-19 T 14-10-2018 MC28_3080 12735c161ce06f6a7e5033384d4a5747 120 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 8.7E-37 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 MC28_2566 04fa3ed5d38ca84f255455e4f99364f0 259 SUPERFAMILY SSF55729 154 254 1.27E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2566 04fa3ed5d38ca84f255455e4f99364f0 259 Gene3D G3DSA:3.40.630.30 91 255 5.9E-10 T 14-10-2018 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 203 216 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 Gene3D G3DSA:3.40.50.10490 1 51 5.7E-18 T 14-10-2018 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 Pfam PF00342 Phosphoglucose isomerase 77 426 1.2E-21 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 Gene3D G3DSA:3.40.50.10490 55 227 1.8E-153 T 14-10-2018 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 409 426 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 SUPERFAMILY SSF53697 6 448 3.01E-144 T 14-10-2018 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 377 395 4.4E-27 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 274 295 4.4E-27 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 409 422 4.4E-27 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 77 96 4.4E-27 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 395 409 4.4E-27 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 199 217 4.4E-27 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 436 26.533 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4166 3e867bfa9dc5b6b0e0d5d894974bafab 450 Gene3D G3DSA:3.40.50.10490 228 418 1.8E-153 T 14-10-2018 MC28_4626 6983bd4e7a0739610eb15746404c901f 98 ProDom PD705231 YWDI GROUP-SPECIFIC 1 98 5.0E-29 T 14-10-2018 IPR035218 Protein of unknown function DUF5327 MC28_4626 6983bd4e7a0739610eb15746404c901f 98 Pfam PF17261 Family of unknown function (DUF5327) 1 98 3.3E-23 T 14-10-2018 IPR035218 Protein of unknown function DUF5327 MC28_G368 59e283fafd30894d963675b93775d935 155 Pfam PF10903 Protein of unknown function (DUF2691) 4 150 5.4E-21 T 14-10-2018 IPR020216 Uncharacterised protein family, YncE MC28_G368 59e283fafd30894d963675b93775d935 155 ProDom PD091678 YNCE 4 149 5.0E-10 T 14-10-2018 IPR020216 Uncharacterised protein family, YncE MC28_3025 e7c7adb80edf75b6dccb078eb36cb859 515 SMART SM00857 3 156 1.4E-19 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_3025 e7c7adb80edf75b6dccb078eb36cb859 515 Gene3D G3DSA:1.10.10.2600 140 292 9.1E-32 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily MC28_3025 e7c7adb80edf75b6dccb078eb36cb859 515 Pfam PF07508 Recombinase 182 291 1.1E-26 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 MC28_3025 e7c7adb80edf75b6dccb078eb36cb859 515 Gene3D G3DSA:3.40.50.1390 1 118 2.0E-16 T 14-10-2018 MC28_3025 e7c7adb80edf75b6dccb078eb36cb859 515 Pfam PF00239 Resolvase, N terminal domain 4 155 8.4E-17 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MC28_3025 e7c7adb80edf75b6dccb078eb36cb859 515 Pfam PF13408 Recombinase zinc beta ribbon domain 304 356 1.4E-7 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain MC28_3025 e7c7adb80edf75b6dccb078eb36cb859 515 SUPERFAMILY SSF53041 1 156 1.57E-19 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 MC28_0161 51a225a9211bc0f66c3847ae008d056d 350 SUPERFAMILY SSF54506 17 347 1.68E-106 T 14-10-2018 MC28_0161 51a225a9211bc0f66c3847ae008d056d 350 Gene3D G3DSA:3.10.310.10 24 349 8.7E-129 T 14-10-2018 MC28_0161 51a225a9211bc0f66c3847ae008d056d 350 PIRSF PIRSF029792 17 350 5.4E-136 T 14-10-2018 IPR008794 Proline racemase family MC28_0161 51a225a9211bc0f66c3847ae008d056d 350 Pfam PF05544 Proline racemase 26 347 3.3E-107 T 14-10-2018 IPR008794 Proline racemase family MC28_0161 51a225a9211bc0f66c3847ae008d056d 350 Gene3D G3DSA:3.10.310.10 162 326 8.7E-129 T 14-10-2018 MC28_1713 2fd5b8897ac888f1b402377b4214a81f 399 SUPERFAMILY SSF58100 27 391 3.4E-78 T 14-10-2018 MC28_1713 2fd5b8897ac888f1b402377b4214a81f 399 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 35 219 4.0E-60 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 MC28_1713 2fd5b8897ac888f1b402377b4214a81f 399 Gene3D G3DSA:1.20.1170.10 28 398 7.3E-89 T 14-10-2018 MC28_2193 47f922006abe646cb50e725c2dd6a9f6 90 Pfam PF06127 Protein of unknown function (DUF962) 2 88 5.0E-24 T 14-10-2018 IPR009305 Protein of unknown function DUF962 MC28_1002 c0508e065c88f197b224e284bed8d73d 302 SUPERFAMILY SSF55961 1 159 3.43E-5 T 14-10-2018 MC28_1002 c0508e065c88f197b224e284bed8d73d 302 Pfam PF13781 DoxX-like family 180 280 9.1E-25 T 14-10-2018 IPR025695 DoxX-like family MC28_1912 dbfd11cb178e5958366ac8abd8029b60 217 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 151 205 2.7E-16 T 14-10-2018 MC28_1755 d26d1187126086adb875a29f9e029f03 226 Pfam PF13021 Domain of unknown function (DUF3885) 184 221 5.9E-15 T 14-10-2018 IPR024976 Domain of unknown function DUF3885 MC28_F104 951fdf56461f3971a2f90ecdc8414767 222 SUPERFAMILY SSF89623 7 158 3.66E-27 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 MC28_F104 951fdf56461f3971a2f90ecdc8414767 222 Pfam PF02502 Ribose/Galactose Isomerase 9 139 1.2E-22 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 MC28_F104 951fdf56461f3971a2f90ecdc8414767 222 Gene3D G3DSA:3.40.1400.10 7 220 2.3E-81 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 MC28_G166 cfa54462a5f4a72c935bc760885cc02b 224 Gene3D G3DSA:3.40.50.2300 1 125 1.8E-31 T 14-10-2018 MC28_G166 cfa54462a5f4a72c935bc760885cc02b 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 1.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_G166 cfa54462a5f4a72c935bc760885cc02b 224 Pfam PF00072 Response regulator receiver domain 3 112 6.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G166 cfa54462a5f4a72c935bc760885cc02b 224 SUPERFAMILY SSF52172 1 124 9.68E-35 T 14-10-2018 IPR011006 CheY-like superfamily MC28_G166 cfa54462a5f4a72c935bc760885cc02b 224 SUPERFAMILY SSF46894 129 223 2.83E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MC28_G166 cfa54462a5f4a72c935bc760885cc02b 224 Gene3D G3DSA:1.10.10.10 126 224 4.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_G166 cfa54462a5f4a72c935bc760885cc02b 224 SMART SM00448 1 111 1.2E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_G166 cfa54462a5f4a72c935bc760885cc02b 224 SMART SM00862 148 223 1.5E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3367 06890308fd60ae5a53e6d466ec812dae 112 Pfam PF01740 STAS domain 2 103 1.9E-22 T 14-10-2018 IPR002645 STAS domain MC28_3367 06890308fd60ae5a53e6d466ec812dae 112 Gene3D G3DSA:3.30.750.24 1 112 4.3E-33 T 14-10-2018 IPR036513 STAS domain superfamily MC28_3367 06890308fd60ae5a53e6d466ec812dae 112 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 1 106 9.0E-46 T 14-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 MC28_3367 06890308fd60ae5a53e6d466ec812dae 112 SUPERFAMILY SSF52091 2 107 1.2E-30 T 14-10-2018 IPR036513 STAS domain superfamily MC28_3367 06890308fd60ae5a53e6d466ec812dae 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 102 6.2E-36 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 MC28_1139 b85185d283317ac9c2ec6da784c37a12 286 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 274 2.1E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 MC28_4907 5df3079255d1e4f37da3293b488e7da4 109 Pfam PF14470 Bacterial PH domain 13 105 1.7E-13 T 14-10-2018 IPR039519 YokE-like, PH domain MC28_5262 148fbec5a86f16dc3cf2fa05f8cdefe2 139 SUPERFAMILY SSF55729 12 129 1.5E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_5262 148fbec5a86f16dc3cf2fa05f8cdefe2 139 Gene3D G3DSA:3.40.630.30 4 135 6.2E-37 T 14-10-2018 MC28_5262 148fbec5a86f16dc3cf2fa05f8cdefe2 139 Pfam PF13673 Acetyltransferase (GNAT) domain 26 127 1.2E-15 T 14-10-2018 IPR000182 GNAT domain MC28_0289 1a7d49331dca671c329e0671ae80f532 217 Pfam PF06161 Protein of unknown function (DUF975) 3 127 2.2E-14 T 14-10-2018 IPR010380 Protein of unknown function DUF975 MC28_0289 1a7d49331dca671c329e0671ae80f532 217 Pfam PF06161 Protein of unknown function (DUF975) 119 207 5.9E-29 T 14-10-2018 IPR010380 Protein of unknown function DUF975 MC28_3235 2068bf8ba3b6975405be47b49a4f82bc 95 Hamap MF_01560 UPF0358 protein . 3 93 27.702 T 14-10-2018 IPR009983 Uncharacterised protein family UPF0358 MC28_3235 2068bf8ba3b6975405be47b49a4f82bc 95 SUPERFAMILY SSF140404 6 84 8.24E-37 T 14-10-2018 IPR036270 UPF0358 superfamily MC28_3235 2068bf8ba3b6975405be47b49a4f82bc 95 Gene3D G3DSA:1.10.287.750 3 93 4.1E-38 T 14-10-2018 IPR036270 UPF0358 superfamily MC28_3235 2068bf8ba3b6975405be47b49a4f82bc 95 Pfam PF07408 Protein of unknown function (DUF1507) 9 91 1.3E-41 T 14-10-2018 IPR009983 Uncharacterised protein family UPF0358 MC28_2919 017f9d3f8a87e5037bf92c9373056031 382 Pfam PF02719 Polysaccharide biosynthesis protein 60 333 7.6E-104 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain MC28_2919 017f9d3f8a87e5037bf92c9373056031 382 Gene3D G3DSA:3.90.25.30 218 372 2.6E-119 T 14-10-2018 MC28_2919 017f9d3f8a87e5037bf92c9373056031 382 Gene3D G3DSA:3.40.50.720 57 360 2.6E-119 T 14-10-2018 MC28_2919 017f9d3f8a87e5037bf92c9373056031 382 SUPERFAMILY SSF51735 55 312 3.36E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4344 764a6fb9567d5b02d7a735b998ece230 134 Hamap MF_01048 Protein PsiE [psiE]. 1 134 26.137 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 MC28_4344 764a6fb9567d5b02d7a735b998ece230 134 Pfam PF06146 Phosphate-starvation-inducible E 57 121 2.0E-16 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like MC28_4344 764a6fb9567d5b02d7a735b998ece230 134 PIRSF PIRSF029598 1 134 1.9E-50 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 MC28_1126 7ae3e153ae894bd24379054e2e248eae 216 SUPERFAMILY SSF52833 1 200 8.53E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_1126 7ae3e153ae894bd24379054e2e248eae 216 Gene3D G3DSA:3.40.30.10 1 196 2.6E-39 T 14-10-2018 MC28_1126 7ae3e153ae894bd24379054e2e248eae 216 Pfam PF01323 DSBA-like thioredoxin domain 6 193 4.1E-30 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 MC28_1126 7ae3e153ae894bd24379054e2e248eae 216 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 MC28_3805 44c9639c2bcadd7be8ec4671ecd06fe7 723 Pfam PF01391 Collagen triple helix repeat (20 copies) 37 94 2.4E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_3805 44c9639c2bcadd7be8ec4671ecd06fe7 723 Pfam PF01391 Collagen triple helix repeat (20 copies) 529 587 6.3E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_2407 babae1d87ddfbc55de246036736a5594 560 Pfam PF14414 A nuclease of the HNH/ENDO VII superfamily with conserved WHH 522 555 5.4E-10 T 14-10-2018 IPR032869 WHH domain-containing protein MC28_4435 eab3f672acd3a61a2e462baa920a38e9 357 Pfam PF00953 Glycosyl transferase family 4 72 231 5.9E-39 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 MC28_4435 eab3f672acd3a61a2e462baa920a38e9 357 ProSitePatterns PS01348 MraY family signature 2. 147 158 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_2560 6ef9d54ab4911d9f5ee611d0bd806073 264 Pfam PF00753 Metallo-beta-lactamase superfamily 66 199 1.5E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2560 6ef9d54ab4911d9f5ee611d0bd806073 264 SMART SM00849 65 235 3.1E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_2560 6ef9d54ab4911d9f5ee611d0bd806073 264 Gene3D G3DSA:3.60.15.10 39 263 8.0E-13 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_2560 6ef9d54ab4911d9f5ee611d0bd806073 264 SUPERFAMILY SSF56281 48 235 5.28E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3295 fa0557681dc4a9af579999f2273d290a 144 Pfam PF14040 Deoxyribonuclease NucA/NucB 46 130 2.8E-10 T 14-10-2018 IPR029476 Deoxyribonuclease NucA/NucB MC28_2618 af483f5b0af4d5c8bb7d849c13f677ce 444 Pfam PF03600 Citrate transporter 29 385 1.0E-50 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 MC28_2618 af483f5b0af4d5c8bb7d849c13f677ce 444 PRINTS PR00758 Arsenical pump membrane protein signature 113 137 1.2E-10 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_2618 af483f5b0af4d5c8bb7d849c13f677ce 444 PRINTS PR00758 Arsenical pump membrane protein signature 414 438 1.2E-10 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_2618 af483f5b0af4d5c8bb7d849c13f677ce 444 PRINTS PR00758 Arsenical pump membrane protein signature 289 313 1.2E-10 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_2618 af483f5b0af4d5c8bb7d849c13f677ce 444 PRINTS PR00758 Arsenical pump membrane protein signature 230 255 1.2E-10 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_2618 af483f5b0af4d5c8bb7d849c13f677ce 444 PRINTS PR00758 Arsenical pump membrane protein signature 381 406 1.2E-10 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_4690 95dfba81ff61c12f763a9d0a1b078e27 238 Pfam PF13186 Iron-sulfur cluster-binding domain 165 230 3.0E-12 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain MC28_4690 95dfba81ff61c12f763a9d0a1b078e27 238 SUPERFAMILY SSF102114 3 233 3.53E-24 T 14-10-2018 MC28_3401 5c29e70dc07748296ad102b033bf2f0b 80 SMART SM00704 27 72 0.0011 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 MC28_3401 5c29e70dc07748296ad102b033bf2f0b 80 Gene3D G3DSA:3.40.5.90 14 77 4.9E-14 T 14-10-2018 MC28_3401 5c29e70dc07748296ad102b033bf2f0b 80 Pfam PF09360 Iron-binding zinc finger CDGSH type 23 67 6.0E-17 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 MC28_3401 5c29e70dc07748296ad102b033bf2f0b 80 PIRSF PIRSF037158 1 80 5.6E-54 T 14-10-2018 IPR017122 Uncharacterised conserved protein UCP037158 MC28_0810 6ddf5a33dafd0ec5b685f96be08e30b9 317 Pfam PF13271 Domain of unknown function (DUF4062) 1 85 1.8E-21 T 14-10-2018 IPR025139 Domain of unknown function DUF4062 MC28_E004 7a2f207c1e88b9c70c55de99463a4eb3 859 SUPERFAMILY SSF52540 143 646 5.26E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_E004 7a2f207c1e88b9c70c55de99463a4eb3 859 Pfam PF12696 TraM recognition site of TraD and TraG 525 641 2.6E-29 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site MC28_E004 7a2f207c1e88b9c70c55de99463a4eb3 859 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 113 388 1.6E-16 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 MC28_E004 7a2f207c1e88b9c70c55de99463a4eb3 859 Gene3D G3DSA:3.40.50.300 448 664 4.1E-31 T 14-10-2018 MC28_2292 56bb9be6063dc6ad2e772b885a6ec956 108 Pfam PF08863 YolD-like protein 16 108 8.2E-25 T 14-10-2018 IPR014962 YolD-like protein MC28_0079 3bd138c181507c3945e1a450e3fa87f7 438 Pfam PF05525 Branched-chain amino acid transport protein 8 428 8.6E-141 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_0079 3bd138c181507c3945e1a450e3fa87f7 438 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 15 415 1.8E-127 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_3060 341ddf0681e8de1d17f103168be6335a 257 Hamap MF_00052_B Ribonuclease HII [rnhB]. 73 251 36.799 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 MC28_3060 341ddf0681e8de1d17f103168be6335a 257 SUPERFAMILY SSF53098 62 256 1.82E-71 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_3060 341ddf0681e8de1d17f103168be6335a 257 Pfam PF01351 Ribonuclease HII 75 249 1.5E-34 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain MC28_3060 341ddf0681e8de1d17f103168be6335a 257 Gene3D G3DSA:3.30.420.10 49 257 2.0E-83 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_0009 3cc11ca3ae6b9bb734760999d1d67c22 194 Gene3D G3DSA:3.20.20.70 1 193 1.3E-45 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0009 3cc11ca3ae6b9bb734760999d1d67c22 194 SUPERFAMILY SSF51391 10 187 4.84E-42 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_0009 3cc11ca3ae6b9bb734760999d1d67c22 194 Pfam PF02581 Thiamine monophosphate synthase 9 169 8.8E-39 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_4427 2c7a496e390d2de32b54559e30891319 374 Pfam PF00271 Helicase conserved C-terminal domain 238 333 4.5E-9 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4427 2c7a496e390d2de32b54559e30891319 374 SMART SM00490 254 335 1.1E-10 T 14-10-2018 IPR001650 Helicase, C-terminal MC28_4427 2c7a496e390d2de32b54559e30891319 374 SMART SM00487 28 210 2.8E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain MC28_4427 2c7a496e390d2de32b54559e30891319 374 Gene3D G3DSA:3.40.50.300 33 197 1.7E-22 T 14-10-2018 MC28_4427 2c7a496e390d2de32b54559e30891319 374 SUPERFAMILY SSF52540 44 347 4.29E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4427 2c7a496e390d2de32b54559e30891319 374 Pfam PF04851 Type III restriction enzyme, res subunit 31 179 6.3E-10 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 MC28_4427 2c7a496e390d2de32b54559e30891319 374 Gene3D G3DSA:3.40.50.300 216 351 4.0E-21 T 14-10-2018 MC28_4092 b1ea0990a68aa911d59c00c28fe0a2e7 192 Pfam PF17294 Uncharacterised lipoprotein family 28 191 7.0E-51 T 14-10-2018 IPR035253 Putative lipoprotein, bacteria MC28_4092 b1ea0990a68aa911d59c00c28fe0a2e7 192 Gene3D G3DSA:3.30.70.3060 32 176 4.0E-42 T 14-10-2018 MC28_4092 b1ea0990a68aa911d59c00c28fe0a2e7 192 Gene3D G3DSA:2.40.40.60 61 157 4.0E-42 T 14-10-2018 MC28_0280 a313804b025984f9b9f60a9dfabc3038 144 ProSitePatterns PS00892 HIT domain signature. 90 108 - T 14-10-2018 IPR019808 Histidine triad, conserved site MC28_0280 a313804b025984f9b9f60a9dfabc3038 144 Gene3D G3DSA:1.20.5.1170 118 144 2.4E-21 T 14-10-2018 MC28_0280 a313804b025984f9b9f60a9dfabc3038 144 Gene3D G3DSA:3.30.428.10 1 117 1.2E-40 T 14-10-2018 IPR036265 HIT-like superfamily MC28_0280 a313804b025984f9b9f60a9dfabc3038 144 Pfam PF01230 HIT domain 16 110 9.0E-28 T 14-10-2018 IPR001310 Histidine triad (HIT) protein MC28_0280 a313804b025984f9b9f60a9dfabc3038 144 SUPERFAMILY SSF54197 6 140 3.87E-47 T 14-10-2018 IPR036265 HIT-like superfamily MC28_0280 a313804b025984f9b9f60a9dfabc3038 144 PRINTS PR00332 Histidine triad family signature 97 107 1.9E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein MC28_0280 a313804b025984f9b9f60a9dfabc3038 144 PRINTS PR00332 Histidine triad family signature 30 48 1.9E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein MC28_0280 a313804b025984f9b9f60a9dfabc3038 144 PRINTS PR00332 Histidine triad family signature 9 25 1.9E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein MC28_2338 7c9754727572e6ed4fefd57b28c9bd1f 210 Pfam PF04116 Fatty acid hydroxylase superfamily 42 184 6.0E-17 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 MC28_4772 3023b572697f314a74506c8af9b41db9 95 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 12 95 8.7E-36 T 14-10-2018 IPR012504 Sporulation protein YabP MC28_4772 3023b572697f314a74506c8af9b41db9 95 PIRSF PIRSF011576 1 95 1.3E-56 T 14-10-2018 IPR012504 Sporulation protein YabP MC28_4772 3023b572697f314a74506c8af9b41db9 95 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 11 95 1.0E-42 T 14-10-2018 IPR012504 Sporulation protein YabP MC28_4772 3023b572697f314a74506c8af9b41db9 95 Gene3D G3DSA:2.60.40.2000 20 77 1.2E-24 T 14-10-2018 IPR038705 YabP superfamily MC28_4772 3023b572697f314a74506c8af9b41db9 95 Pfam PF07873 YabP family 12 77 6.0E-21 T 14-10-2018 IPR022476 Sporulation protein YabP/YqfC MC28_C013 6cc317bfb2ce3d32cd022805f01be524 386 SUPERFAMILY SSF53067 212 366 4.66E-12 T 14-10-2018 MC28_C013 6cc317bfb2ce3d32cd022805f01be524 386 Gene3D G3DSA:3.30.420.40 212 343 4.5E-12 T 14-10-2018 MC28_C013 6cc317bfb2ce3d32cd022805f01be524 386 Gene3D G3DSA:3.30.420.40 5 211 6.5E-14 T 14-10-2018 MC28_C013 6cc317bfb2ce3d32cd022805f01be524 386 SUPERFAMILY SSF53067 5 189 9.19E-6 T 14-10-2018 MC28_1871 8062a9214c8dede3596e3c1d81df7c5e 176 Pfam PF14091 Domain of unknown function (DUF4269) 21 167 7.7E-59 T 14-10-2018 IPR025365 Protein of unknown function DUF4269 MC28_2663 b54c61a4b8a452cdd3e5d13376ac621f 132 Pfam PF11070 Protein of unknown function (DUF2871) 1 128 1.1E-36 T 14-10-2018 IPR021299 Protein of unknown function DUF2871 MC28_F074 8ea2a29ced1998dfab3f7fb2442e3828 217 Gene3D G3DSA:3.30.2210.10 102 206 3.0E-5 T 14-10-2018 MC28_0869 6061c0990d415a5a6aee67fdc173d1ad 39 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 7 30 8.7E-11 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_0869 6061c0990d415a5a6aee67fdc173d1ad 39 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 9 32 2.0E-11 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_4534 3ab082db801b05bdc5ca07df3764fd8d 366 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 3 366 46.851 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4534 3ab082db801b05bdc5ca07df3764fd8d 366 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 291 365 4.8E-25 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4534 3ab082db801b05bdc5ca07df3764fd8d 366 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 291 2.9E-68 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4534 3ab082db801b05bdc5ca07df3764fd8d 366 SUPERFAMILY SSF56762 16 365 3.4E-118 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4534 3ab082db801b05bdc5ca07df3764fd8d 366 Gene3D G3DSA:1.10.645.20 4 366 2.4E-151 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_3829 86e6d81e973d316b20ebc774b12d5d51 232 Pfam PF05031 Iron Transport-associated domain 31 146 4.8E-39 T 14-10-2018 IPR006635 NEAT domain MC28_3829 86e6d81e973d316b20ebc774b12d5d51 232 SUPERFAMILY SSF158911 18 155 8.11E-45 T 14-10-2018 IPR037250 NEAT domain superfamily MC28_3829 86e6d81e973d316b20ebc774b12d5d51 232 TIGRFAM TIGR03656 IsdC: heme uptake protein IsdC 1 230 1.9E-93 T 14-10-2018 IPR019909 Haem uptake protein IsdC GO:0009274|GO:0015886|GO:0030492 MC28_3829 86e6d81e973d316b20ebc774b12d5d51 232 Gene3D G3DSA:2.60.40.1850 24 152 8.9E-47 T 14-10-2018 MC28_3829 86e6d81e973d316b20ebc774b12d5d51 232 TIGRFAM TIGR03063 srtB_target: sortase B cell surface sorting signal 201 229 2.9E-13 T 14-10-2018 IPR017502 Sortase B cell surface sorting signal MC28_3829 86e6d81e973d316b20ebc774b12d5d51 232 SMART SM00725 32 153 9.8E-47 T 14-10-2018 IPR006635 NEAT domain MC28_1859 4b2aa7c5675a9301248d2b1c9a0bc1f7 157 Pfam PF01381 Helix-turn-helix 14 48 1.2E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_1859 4b2aa7c5675a9301248d2b1c9a0bc1f7 157 Gene3D G3DSA:1.10.260.40 2 69 1.1E-10 T 14-10-2018 MC28_1859 4b2aa7c5675a9301248d2b1c9a0bc1f7 157 SUPERFAMILY SSF47413 7 62 1.07E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_1859 4b2aa7c5675a9301248d2b1c9a0bc1f7 157 SMART SM00530 13 67 1.1E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_3457 668c31b14ee37addd397d75b0df6cc16 299 PIRSF PIRSF000428 1 299 2.4E-83 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 MC28_3457 668c31b14ee37addd397d75b0df6cc16 299 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 3 296 2.9E-130 T 14-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 MC28_3457 668c31b14ee37addd397d75b0df6cc16 299 Gene3D G3DSA:3.40.718.10 2 299 6.7E-106 T 14-10-2018 MC28_3457 668c31b14ee37addd397d75b0df6cc16 299 Pfam PF01515 Phosphate acetyl/butaryl transferase 5 79 1.6E-5 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 MC28_3457 668c31b14ee37addd397d75b0df6cc16 299 Pfam PF01515 Phosphate acetyl/butaryl transferase 80 294 7.5E-50 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 MC28_3457 668c31b14ee37addd397d75b0df6cc16 299 SUPERFAMILY SSF53659 4 297 2.73E-62 T 14-10-2018 MC28_3514 42f3d4c5482d2ec9d1ef1e496b567ffe 124 SMART SM00345 17 76 4.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_3514 42f3d4c5482d2ec9d1ef1e496b567ffe 124 SUPERFAMILY SSF46785 6 80 1.22E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_3514 42f3d4c5482d2ec9d1ef1e496b567ffe 124 Gene3D G3DSA:1.10.10.10 10 124 3.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_3514 42f3d4c5482d2ec9d1ef1e496b567ffe 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 4.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MC28_1848 69ae6628a9e6b9324f0302fee41ed9ac 293 Pfam PF00069 Protein kinase domain 76 245 5.2E-8 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MC28_1848 69ae6628a9e6b9324f0302fee41ed9ac 293 Gene3D G3DSA:1.10.510.10 76 291 2.3E-14 T 14-10-2018 MC28_1848 69ae6628a9e6b9324f0302fee41ed9ac 293 SUPERFAMILY SSF56112 71 286 1.06E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_4919 bfc368d10108414b9a2a455ab4b3ea16 307 SUPERFAMILY SSF161098 78 293 1.83E-16 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4919 bfc368d10108414b9a2a455ab4b3ea16 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 305 1.0E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_4919 bfc368d10108414b9a2a455ab4b3ea16 307 Gene3D G3DSA:1.10.3720.10 72 300 9.4E-20 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4120 a85d05ce34e22f93f800bf47bf5c6fa6 211 PIRSF PIRSF038959 1 210 7.2E-52 T 14-10-2018 IPR026272 Immunity protein SdpI MC28_4120 a85d05ce34e22f93f800bf47bf5c6fa6 211 Pfam PF07853 Protein of unknown function (DUF1648) 9 56 7.2E-15 T 14-10-2018 IPR012867 Domain of unknown function DUF1648 MC28_4120 a85d05ce34e22f93f800bf47bf5c6fa6 211 Pfam PF13630 SdpI/YhfL protein family 133 201 7.7E-21 T 14-10-2018 IPR025962 SdpI/YhfL protein family MC28_0123 8c7bc323c33eec85a0c6ce3e9526c314 171 SUPERFAMILY SSF52317 1 170 2.81E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0123 8c7bc323c33eec85a0c6ce3e9526c314 171 Gene3D G3DSA:3.40.50.880 1 171 2.3E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_0123 8c7bc323c33eec85a0c6ce3e9526c314 171 Pfam PF01965 DJ-1/PfpI family 3 167 3.6E-51 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 MC28_0123 8c7bc323c33eec85a0c6ce3e9526c314 171 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 170 3.1E-56 T 14-10-2018 IPR006286 Deglycase PfpI MC28_5354 9489a17507567df060a8042e1970d558 465 Gene3D G3DSA:1.20.1740.10 1 465 1.8E-61 T 14-10-2018 MC28_5354 9489a17507567df060a8042e1970d558 465 PIRSF PIRSF006060 1 462 1.1E-54 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_5354 9489a17507567df060a8042e1970d558 465 Pfam PF13520 Amino acid permease 7 430 6.1E-51 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 MC28_2991 5e78cf61644854bfb02cc3cef9840695 195 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 5 188 7.6E-42 T 14-10-2018 IPR006490 Phage major tail protein, phi13 family MC28_1747 16c5fe23d3ff7a00ac2172a7b1a2f717 196 SUPERFAMILY SSF52540 16 188 3.67E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1747 16c5fe23d3ff7a00ac2172a7b1a2f717 196 Gene3D G3DSA:3.40.50.300 8 190 2.4E-23 T 14-10-2018 MC28_2724 8c002f4e2fff7b1e7f688a3beda4835c 512 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 38 491 8.2E-173 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_2724 8c002f4e2fff7b1e7f688a3beda4835c 512 PIRSF PIRSF005690 24 507 1.4E-188 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_3770 18e1d297cb864352a422f49ce5fdb7f6 167 Gene3D G3DSA:3.60.21.10 1 165 1.3E-45 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_3770 18e1d297cb864352a422f49ce5fdb7f6 167 SUPERFAMILY SSF56300 1 162 3.04E-44 T 14-10-2018 MC28_3770 18e1d297cb864352a422f49ce5fdb7f6 167 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 144 1.7E-31 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 MC28_3770 18e1d297cb864352a422f49ce5fdb7f6 167 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 148 5.2E-31 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 MC28_0339 dfd64e5fa58ea1d5f951ad8442dd5823 284 Pfam PF02517 CAAX protease self-immunity 129 211 4.6E-16 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_2494 3372d130d2fb82bde9be8ccdd36306ac 382 SUPERFAMILY SSF103473 2 370 1.83E-50 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_2494 3372d130d2fb82bde9be8ccdd36306ac 382 Gene3D G3DSA:1.20.1250.20 190 372 1.1E-18 T 14-10-2018 MC28_2494 3372d130d2fb82bde9be8ccdd36306ac 382 Pfam PF07690 Major Facilitator Superfamily 2 292 4.2E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2494 3372d130d2fb82bde9be8ccdd36306ac 382 Gene3D G3DSA:1.20.1250.20 1 185 1.4E-23 T 14-10-2018 MC28_1775 19e2dc652ceb5dc8ae96a0e7015bb368 319 Pfam PF00561 alpha/beta hydrolase fold 66 190 2.0E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1775 19e2dc652ceb5dc8ae96a0e7015bb368 319 SUPERFAMILY SSF53474 47 316 7.67E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1775 19e2dc652ceb5dc8ae96a0e7015bb368 319 Gene3D G3DSA:3.40.50.1820 42 319 2.3E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_4200 08c1482397aa9f5c6f4ecee9ff11556f 120 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 4 117 2.6E-20 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_4200 08c1482397aa9f5c6f4ecee9ff11556f 120 Gene3D G3DSA:2.40.50.480 24 120 5.9E-37 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_4200 08c1482397aa9f5c6f4ecee9ff11556f 120 SUPERFAMILY SSF159121 27 118 7.06E-30 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_4200 08c1482397aa9f5c6f4ecee9ff11556f 120 Pfam PF06486 Protein of unknown function (DUF1093) 27 107 1.5E-26 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_0394 301a9a7543d3f877458b2ca8402fccf0 58 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 1 58 8.0E-25 T 14-10-2018 IPR024558 ComZ MC28_0394 301a9a7543d3f877458b2ca8402fccf0 58 Pfam PF10815 ComZ 3 57 1.4E-32 T 14-10-2018 IPR024558 ComZ MC28_4106 2715f807416f8ab113ea5ee48471a762 251 Pfam PF14081 Domain of unknown function (DUF4262) 129 233 1.6E-15 T 14-10-2018 IPR025358 Protein of unknown function DUF4262 MC28_D044 1198657496ae85f6cf529fc6d10fe4af 183 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 156 5.2E-31 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase MC28_3217 ab6ba3429a4cd5d67b09b496efe31865 46 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 2 32 4.7E-8 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 MC28_2148 2a288c4dea340f1031dfcfcdd537b8a4 173 SUPERFAMILY SSF52540 10 144 1.29E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2148 2a288c4dea340f1031dfcfcdd537b8a4 173 Pfam PF13671 AAA domain 11 126 6.6E-7 T 14-10-2018 MC28_2148 2a288c4dea340f1031dfcfcdd537b8a4 173 Gene3D G3DSA:3.40.50.300 8 170 3.0E-17 T 14-10-2018 MC28_4289 a09e63d991fb9062240f751e55bc7576 128 Pfam PF13074 Protein of unknown function (DUF3938) 25 126 1.2E-68 T 14-10-2018 IPR025070 Protein of unknown function DUF3938 MC28_0435 c42881c3cbd470897180091e743be70b 229 SUPERFAMILY SSF53335 14 193 7.0E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_0435 c42881c3cbd470897180091e743be70b 229 Gene3D G3DSA:3.40.50.150 19 229 8.0E-65 T 14-10-2018 MC28_0435 c42881c3cbd470897180091e743be70b 229 Pfam PF13489 Methyltransferase domain 29 178 1.6E-17 T 14-10-2018 MC28_G145 8d498b3cfa785e74cd9a38db0034ddb3 262 Gene3D G3DSA:3.40.50.300 7 247 2.5E-64 T 14-10-2018 MC28_G145 8d498b3cfa785e74cd9a38db0034ddb3 262 SUPERFAMILY SSF52540 9 229 2.1E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G145 8d498b3cfa785e74cd9a38db0034ddb3 262 Pfam PF00005 ABC transporter 28 176 4.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_G145 8d498b3cfa785e74cd9a38db0034ddb3 262 SMART SM00382 37 224 2.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_1283 b35a7fa2714eb176af3f83f5dc3c5f6d 343 Pfam PF07690 Major Facilitator Superfamily 18 283 2.1E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1283 b35a7fa2714eb176af3f83f5dc3c5f6d 343 SUPERFAMILY SSF103473 14 337 2.49E-31 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1283 b35a7fa2714eb176af3f83f5dc3c5f6d 343 Gene3D G3DSA:1.20.1250.20 6 330 4.0E-25 T 14-10-2018 MC28_1761 ca3fd9849274f02caeff1768a8925706 553 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 267 389 1.1E-22 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain MC28_1761 ca3fd9849274f02caeff1768a8925706 553 Gene3D G3DSA:2.60.40.10 163 268 7.5E-41 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1761 ca3fd9849274f02caeff1768a8925706 553 Pfam PF00746 LPXTG cell wall anchor motif 519 549 2.0E-4 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor MC28_1761 ca3fd9849274f02caeff1768a8925706 553 Gene3D G3DSA:2.60.40.10 410 515 1.2E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1761 ca3fd9849274f02caeff1768a8925706 553 SUPERFAMILY SSF49478 172 236 2.08E-8 T 14-10-2018 MC28_1761 ca3fd9849274f02caeff1768a8925706 553 Gene3D G3DSA:2.60.40.740 269 409 1.7E-37 T 14-10-2018 MC28_1761 ca3fd9849274f02caeff1768a8925706 553 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 519 549 7.9E-6 T 14-10-2018 MC28_1761 ca3fd9849274f02caeff1768a8925706 553 Gene3D G3DSA:2.60.40.10 24 162 4.0E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold MC28_1761 ca3fd9849274f02caeff1768a8925706 553 SUPERFAMILY SSF49478 419 479 9.02E-5 T 14-10-2018 MC28_4356 5745dddad7efb6fb94a866392e7199ca 354 Pfam PF01032 FecCD transport family 70 350 3.6E-42 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_4356 5745dddad7efb6fb94a866392e7199ca 354 SUPERFAMILY SSF81345 31 350 1.44E-53 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_4356 5745dddad7efb6fb94a866392e7199ca 354 Gene3D G3DSA:1.10.3470.10 35 353 4.9E-49 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_2347 89975f571cbb4f0e89dc4ceaf9cf5b24 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 1.7E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_2347 89975f571cbb4f0e89dc4ceaf9cf5b24 130 Gene3D G3DSA:3.10.180.10 1 130 2.8E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2347 89975f571cbb4f0e89dc4ceaf9cf5b24 130 SUPERFAMILY SSF54593 1 127 1.17E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2097 5b86e0a9d46cd02e8d8d7d7a62f18c06 47 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 46 9.1E-19 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_2097 5b86e0a9d46cd02e8d8d7d7a62f18c06 47 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 44 1.3E-15 T 14-10-2018 IPR012655 Uncharacterised protein YrzI MC28_1862 d5438728189604e5749432fda51863ba 141 Pfam PF16219 Domain of unknown function (DUF4879) 30 140 5.1E-26 T 14-10-2018 IPR032624 Protein of unknown function DUF4879 MC28_0065 2a05e32d94ca16112473524159119854 362 Gene3D G3DSA:3.20.20.70 1 241 4.5E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0065 2a05e32d94ca16112473524159119854 362 Gene3D G3DSA:2.40.100.10 242 359 2.5E-42 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_0065 2a05e32d94ca16112473524159119854 362 SUPERFAMILY SSF51445 1 242 7.58E-95 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_0065 2a05e32d94ca16112473524159119854 362 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 358 1.3E-146 T 14-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic MC28_0065 2a05e32d94ca16112473524159119854 362 SUPERFAMILY SSF50891 246 358 2.88E-40 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_4146 d8975c7a79eb0be148d5954152800b4e 464 Gene3D G3DSA:3.60.120.10 2 463 5.2E-105 T 14-10-2018 IPR005801 ADC synthase GO:0009058 MC28_4146 d8975c7a79eb0be148d5954152800b4e 464 Pfam PF00425 chorismate binding enzyme 201 451 1.8E-72 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal MC28_4146 d8975c7a79eb0be148d5954152800b4e 464 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 110 458 7.5E-105 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 MC28_4146 d8975c7a79eb0be148d5954152800b4e 464 SUPERFAMILY SSF56322 28 460 1.13E-103 T 14-10-2018 IPR005801 ADC synthase GO:0009058 MC28_5440 b8ee60d8da116aad4a136f569448a379 85 Pfam PF04023 FeoA domain 7 76 1.1E-18 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 MC28_5440 b8ee60d8da116aad4a136f569448a379 85 SUPERFAMILY SSF50037 12 76 2.75E-18 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal MC28_5440 b8ee60d8da116aad4a136f569448a379 85 SMART SM00899 7 79 1.5E-19 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 MC28_5440 b8ee60d8da116aad4a136f569448a379 85 Gene3D G3DSA:2.30.30.90 4 79 3.6E-23 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain MC28_3161 231f9405be25dc6f054819409ba0db65 1676 SUPERFAMILY SSF57997 37 204 6.28E-5 T 14-10-2018 MC28_3161 231f9405be25dc6f054819409ba0db65 1676 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 214 421 1.0E-36 T 14-10-2018 IPR010090 Phage tail tape measure protein MC28_3161 231f9405be25dc6f054819409ba0db65 1676 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 456 621 2.1E-15 T 14-10-2018 IPR010090 Phage tail tape measure protein MC28_3161 231f9405be25dc6f054819409ba0db65 1676 Pfam PF10145 Phage-related minor tail protein 252 515 2.7E-51 T 14-10-2018 IPR010090 Phage tail tape measure protein MC28_1420 877170453d6a5bd7dbd0a007ad2be548 102 Pfam PF10751 Protein of unknown function (DUF2535) 21 102 1.6E-26 T 14-10-2018 IPR019687 Protein of unknown function DUF2535 MC28_2164 019bfee6284a866727ed718e694062bd 316 Gene3D G3DSA:1.10.10.10 5 60 7.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2164 019bfee6284a866727ed718e694062bd 316 Gene3D G3DSA:3.40.50.1360 64 316 1.9E-70 T 14-10-2018 MC28_2164 019bfee6284a866727ed718e694062bd 316 Pfam PF04198 Putative sugar-binding domain 68 310 1.9E-64 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 MC28_2164 019bfee6284a866727ed718e694062bd 316 SUPERFAMILY SSF100950 68 312 5.14E-62 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_1140 b94c1a53cba90d5daa80c30d9c87d18e 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 18 284 7.7E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 MC28_2015 8a87d8116f7fc553f55864ddab5bc9ab 175 Pfam PF00583 Acetyltransferase (GNAT) family 54 148 1.0E-14 T 14-10-2018 IPR000182 GNAT domain MC28_2015 8a87d8116f7fc553f55864ddab5bc9ab 175 SUPERFAMILY SSF55729 22 174 1.41E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2015 8a87d8116f7fc553f55864ddab5bc9ab 175 Gene3D G3DSA:3.40.630.30 11 175 9.2E-46 T 14-10-2018 MC28_4148 a37c33f8f1b9ef04b9e9a91c50ad89ee 243 Gene3D G3DSA:1.20.120.910 1 126 1.0E-33 T 14-10-2018 MC28_4148 a37c33f8f1b9ef04b9e9a91c50ad89ee 243 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 87 114 1.2E-8 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 MC28_4148 a37c33f8f1b9ef04b9e9a91c50ad89ee 243 SUPERFAMILY SSF57716 89 118 2.0E-5 T 14-10-2018 MC28_4148 a37c33f8f1b9ef04b9e9a91c50ad89ee 243 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 5 160 1.1E-64 T 14-10-2018 IPR014240 Regulatory protein, YteA family MC28_4148 a37c33f8f1b9ef04b9e9a91c50ad89ee 243 SUPERFAMILY SSF109635 2 88 5.75E-15 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily MC28_4278 f182e83f7c805212eb4dda1b2bacf7b2 81 Pfam PF10835 Protein of unknown function (DUF2573) 3 80 3.2E-40 T 14-10-2018 IPR020393 Uncharacterised protein family YusU MC28_4278 f182e83f7c805212eb4dda1b2bacf7b2 81 ProDom PD065427 YUSU IG COIL COILED BH3491 1 69 9.0E-34 T 14-10-2018 IPR020393 Uncharacterised protein family YusU MC28_G300 56dbb93e867ee28033d1abed85a735a4 137 Gene3D G3DSA:1.20.120.580 2 136 2.4E-16 T 14-10-2018 IPR037038 Bsu32300-like superfamily MC28_G300 56dbb93e867ee28033d1abed85a735a4 137 Pfam PF01934 Protein of unknown function DUF86 14 130 5.3E-26 T 14-10-2018 IPR008201 Protein of unknown function DUF86 MC28_2891 692c2a63ad033513ad82a7473c9bb494 37 Gene3D G3DSA:1.20.1080.10 1 36 4.7E-7 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 MC28_E081 c9a46ffcd6718184c2fd9e4254fe42e1 167 Pfam PF02517 CAAX protease self-immunity 27 122 3.4E-13 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_C059 442eb04a96edb20e3637d1794e5ecc1a 309 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 304 2.8E-63 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA MC28_C059 442eb04a96edb20e3637d1794e5ecc1a 309 Pfam PF12784 PD-(D/E)XK nuclease family transposase 9 245 1.2E-61 T 14-10-2018 MC28_1947 c73c4ea5ddb04992091453ee24d8f816 259 Gene3D G3DSA:1.10.10.2520 144 223 9.8E-32 T 14-10-2018 MC28_1947 c73c4ea5ddb04992091453ee24d8f816 259 SUPERFAMILY SSF47090 34 100 4.19E-20 T 14-10-2018 IPR036365 PGBD-like superfamily MC28_1947 c73c4ea5ddb04992091453ee24d8f816 259 Gene3D G3DSA:1.10.101.10 28 111 1.5E-21 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 MC28_1947 c73c4ea5ddb04992091453ee24d8f816 259 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 32 259 2.8E-101 T 14-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 MC28_1947 c73c4ea5ddb04992091453ee24d8f816 259 Pfam PF01471 Putative peptidoglycan binding domain 43 99 3.4E-17 T 14-10-2018 IPR002477 Peptidoglycan binding-like MC28_1947 c73c4ea5ddb04992091453ee24d8f816 259 Pfam PF07486 Cell Wall Hydrolase 160 258 1.6E-28 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 MC28_1947 c73c4ea5ddb04992091453ee24d8f816 259 Gene3D G3DSA:2.40.10.420 224 259 3.6E-23 T 14-10-2018 MC28_5258 7ba344689aa7c7ea6362a392d0f3342d 254 Pfam PF06182 ABC-2 family transporter protein 27 253 4.9E-55 T 14-10-2018 IPR010390 Protein of unknown function DUF990 MC28_2490 8d36295de46370d092cb620dca0f1ac0 151 Pfam PF13673 Acetyltransferase (GNAT) domain 47 148 3.7E-14 T 14-10-2018 IPR000182 GNAT domain MC28_2490 8d36295de46370d092cb620dca0f1ac0 151 Gene3D G3DSA:3.40.630.30 2 135 2.4E-19 T 14-10-2018 MC28_2490 8d36295de46370d092cb620dca0f1ac0 151 SUPERFAMILY SSF55729 31 136 3.09E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4306 84811a2b7d5f94cd9d56f3c85ce75488 231 Gene3D G3DSA:2.60.120.10 9 229 1.4E-79 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_4306 84811a2b7d5f94cd9d56f3c85ce75488 231 Gene3D G3DSA:2.60.120.10 11 134 1.4E-79 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_4306 84811a2b7d5f94cd9d56f3c85ce75488 231 SUPERFAMILY SSF51182 5 229 1.36E-68 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_4306 84811a2b7d5f94cd9d56f3c85ce75488 231 PIRSF PIRSF006232 1 229 1.6E-57 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 MC28_4306 84811a2b7d5f94cd9d56f3c85ce75488 231 Pfam PF02678 Pirin 12 118 2.7E-33 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 MC28_0264 38b80d7fa097bd4bec858acd10197faf 66 Pfam PF14147 Sporulation protein YhaL 4 55 6.1E-29 T 14-10-2018 IPR025428 Sporulation protein YhaL MC28_1239 3d6873bdab68b8fb4e875ad43f008ce6 63 Pfam PF13035 Protein of unknown function (DUF3896) 1 61 5.7E-38 T 14-10-2018 IPR024994 Protein of unknown function DUF3896 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 SUPERFAMILY SSF58104 234 569 4.71E-69 T 14-10-2018 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 Gene3D G3DSA:1.10.287.950 264 570 1.4E-65 T 14-10-2018 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 SMART SM00304 214 266 4.8E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 Gene3D G3DSA:1.10.8.500 214 263 1.2E-6 T 14-10-2018 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 Pfam PF00672 HAMP domain 216 263 2.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 368 521 2.1E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 SMART SM00283 295 570 1.3E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 Pfam PF12729 Four helix bundle sensory module for signal transduction 11 186 7.2E-43 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain MC28_2524 4761c087348d65d6dc0473315d7ef135 576 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 9.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 12 37 9.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_2524 4761c087348d65d6dc0473315d7ef135 576 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 420 9.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 MC28_4077 a9bddee8e50c731ad048c7aa1ba98df7 49 Pfam PF12606 Tumour necrosis factor receptor superfamily member 19 1 45 9.5E-18 T 14-10-2018 IPR022248 TNF receptor family, RELT MC28_1733 6cd3497417fec6da84498919c155869f 262 SUPERFAMILY SSF52096 4 261 1.2E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily MC28_1733 6cd3497417fec6da84498919c155869f 262 Gene3D G3DSA:3.90.226.10 1 202 2.9E-73 T 14-10-2018 MC28_1733 6cd3497417fec6da84498919c155869f 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 261 7.5E-71 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 MC28_1733 6cd3497417fec6da84498919c155869f 262 Gene3D G3DSA:1.10.12.10 203 262 6.8E-28 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal MC28_1733 6cd3497417fec6da84498919c155869f 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 MC28_3231 37b41ff95473c2fb2c025ddb716fb3ef 311 Hamap MF_01664 Heme A synthase [ctaA]. 1 301 30.638 T 14-10-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 MC28_3231 37b41ff95473c2fb2c025ddb716fb3ef 311 Pfam PF02628 Cytochrome oxidase assembly protein 7 286 1.7E-39 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 MC28_4255 f92ee692f0aa4b562b62336a520c449e 114 SUPERFAMILY SSF110455 1 111 4.45E-34 T 14-10-2018 MC28_4255 f92ee692f0aa4b562b62336a520c449e 114 SMART SM00493 5 79 2.4E-6 T 14-10-2018 IPR006171 TOPRIM domain MC28_4255 f92ee692f0aa4b562b62336a520c449e 114 Gene3D G3DSA:3.40.1360.20 1 114 8.5E-43 T 14-10-2018 MC28_3300 5d473e6b45a768569cde5475a9596600 370 SMART SM00354 32 102 2.8E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3300 5d473e6b45a768569cde5475a9596600 370 Gene3D G3DSA:3.40.50.2300 106 358 4.8E-92 T 14-10-2018 MC28_3300 5d473e6b45a768569cde5475a9596600 370 Gene3D G3DSA:3.40.50.2300 197 360 4.8E-92 T 14-10-2018 MC28_3300 5d473e6b45a768569cde5475a9596600 370 Gene3D G3DSA:1.10.260.40 31 90 6.7E-23 T 14-10-2018 MC28_3300 5d473e6b45a768569cde5475a9596600 370 Pfam PF00356 Bacterial regulatory proteins, lacI family 34 79 1.9E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_3300 5d473e6b45a768569cde5475a9596600 370 Pfam PF13377 Periplasmic binding protein-like domain 205 366 6.5E-31 T 14-10-2018 MC28_3300 5d473e6b45a768569cde5475a9596600 370 SUPERFAMILY SSF47413 31 90 1.41E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_3300 5d473e6b45a768569cde5475a9596600 370 SUPERFAMILY SSF53822 91 367 4.52E-74 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_D010 3895ae8f71674fbc34405a0ae4f30214 277 ProDom PD304634 PLASMID TRANSMEMBRANE PXO2-23/BXB0022/GBAA_PXO2_0022 MEMBRANE 16 275 8.0E-112 T 14-10-2018 IPR020397 Uncharacterised protein family, plasmid pXO2-23 MC28_0653 c85b3b18026ebeae21575b57037ab449 233 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MC28_0653 c85b3b18026ebeae21575b57037ab449 233 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 11 168 5.6E-40 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 MC28_0653 c85b3b18026ebeae21575b57037ab449 233 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 69 3.5E-13 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MC28_0653 c85b3b18026ebeae21575b57037ab449 233 Gene3D G3DSA:1.20.120.1760 3 171 1.5E-12 T 14-10-2018 MC28_2760 d6121e03c13e7f0abcbf1ea99463c2ae 182 SUPERFAMILY SSF52833 38 181 2.93E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_2760 d6121e03c13e7f0abcbf1ea99463c2ae 182 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 MC28_2760 d6121e03c13e7f0abcbf1ea99463c2ae 182 Gene3D G3DSA:3.40.30.10 11 182 7.9E-51 T 14-10-2018 MC28_2760 d6121e03c13e7f0abcbf1ea99463c2ae 182 Pfam PF00578 AhpC/TSA family 43 163 4.8E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 MC28_1888 06fa4d70f39a7156df3e421bc59aa482 264 SUPERFAMILY SSF55608 76 145 2.08E-10 T 14-10-2018 IPR027434 Homing endonuclease MC28_1888 06fa4d70f39a7156df3e421bc59aa482 264 Pfam PF14528 LAGLIDADG-like domain 169 237 5.9E-6 T 14-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 MC28_1888 06fa4d70f39a7156df3e421bc59aa482 264 Pfam PF14528 LAGLIDADG-like domain 79 140 3.1E-6 T 14-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 MC28_1888 06fa4d70f39a7156df3e421bc59aa482 264 Gene3D G3DSA:3.10.28.10 74 235 1.4E-19 T 14-10-2018 IPR027434 Homing endonuclease MC28_1888 06fa4d70f39a7156df3e421bc59aa482 264 SUPERFAMILY SSF55608 161 253 1.05E-14 T 14-10-2018 IPR027434 Homing endonuclease MC28_2668 b7a855c0801a3325eafd180cb7b1ae9f 112 SUPERFAMILY SSF52540 2 60 2.17E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2668 b7a855c0801a3325eafd180cb7b1ae9f 112 Gene3D G3DSA:3.40.50.300 1 100 3.4E-13 T 14-10-2018 MC28_2668 b7a855c0801a3325eafd180cb7b1ae9f 112 Pfam PF00005 ABC transporter 20 67 3.3E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_F273 2e9e6635dd9c8c854b64db71e1ebcab9 351 Pfam PF14072 DNA-sulfur modification-associated 22 327 5.7E-30 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB MC28_F273 2e9e6635dd9c8c854b64db71e1ebcab9 351 TIGRFAM TIGR03187 DGQHR: DGQHR domain 39 281 6.1E-23 T 14-10-2018 IPR017601 DGQHR-containing domain MC28_4123 3134f1636635651c87e9b27073c2d246 270 Pfam PF13786 Domain of unknown function (DUF4179) 36 123 3.0E-7 T 14-10-2018 IPR025436 Domain of unknown function DUF4179 MC28_3123 4ecb0a7d19582bcb115cda9477861fbd 272 Gene3D G3DSA:3.60.140.10 6 271 3.0E-89 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily MC28_3123 4ecb0a7d19582bcb115cda9477861fbd 272 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 266 1.0E-55 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase MC28_3123 4ecb0a7d19582bcb115cda9477861fbd 272 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 28 264 6.9E-71 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase MC28_3123 4ecb0a7d19582bcb115cda9477861fbd 272 SUPERFAMILY SSF64438 10 268 2.09E-79 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic MC28_E134 d39cf370e646226502f6864156468ed3 555 Pfam PF01391 Collagen triple helix repeat (20 copies) 364 422 1.4E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_E134 d39cf370e646226502f6864156468ed3 555 Pfam PF01391 Collagen triple helix repeat (20 copies) 310 368 8.0E-7 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_E134 d39cf370e646226502f6864156468ed3 555 Pfam PF01391 Collagen triple helix repeat (20 copies) 56 110 1.5E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_E134 d39cf370e646226502f6864156468ed3 555 Gene3D G3DSA:1.20.5.320 394 438 9.8E-6 T 14-10-2018 MC28_E019 8d79b89bdddde4c79682599361b15e6a 66 SUPERFAMILY SSF47413 2 60 2.79E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_E019 8d79b89bdddde4c79682599361b15e6a 66 Pfam PF01381 Helix-turn-helix 5 56 3.7E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_E019 8d79b89bdddde4c79682599361b15e6a 66 SMART SM00530 1 56 6.9E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_E019 8d79b89bdddde4c79682599361b15e6a 66 Gene3D G3DSA:1.10.260.40 2 65 8.2E-12 T 14-10-2018 MC28_D067 31f9720a1b0799b3e3ad5cc7fc1e29f7 113 Pfam PF08863 YolD-like protein 21 113 3.9E-25 T 14-10-2018 IPR014962 YolD-like protein MC28_3213 8f49a5ea88f12484455f047fef9b8510 409 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 10 390 1.5E-127 T 14-10-2018 IPR014226 Sporulation integral membrane protein YlbJ MC28_1116 e796de57f1e58a52281886c8cbf1e307 415 Pfam PF13687 Domain of unknown function (DUF4153) 221 377 3.2E-7 T 14-10-2018 IPR025291 Protein of unknown function DUF4153 MC28_4083 391df601317cd347f75e80f187e834e1 342 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 215 3.9E-53 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MC28_4083 391df601317cd347f75e80f187e834e1 342 PIRSF PIRSF000267 1 342 1.4E-127 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MC28_4083 391df601317cd347f75e80f187e834e1 342 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 329 9.8E-91 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MC28_4615 37eceddd3fd447643ee6c2727a48dd97 338 SUPERFAMILY SSF81345 7 336 8.11E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_4615 37eceddd3fd447643ee6c2727a48dd97 338 Gene3D G3DSA:1.10.3470.10 7 338 2.7E-101 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_4615 37eceddd3fd447643ee6c2727a48dd97 338 Pfam PF01032 FecCD transport family 20 336 3.5E-96 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_1192 5fffce98e4a4040c9c4bf0922b1d81f0 205 Pfam PF01810 LysE type translocator 15 198 3.4E-29 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 MC28_G111 7f41851d62e2bb66201bec543f17ff84 389 Gene3D G3DSA:3.40.710.10 47 389 1.6E-133 T 14-10-2018 MC28_G111 7f41851d62e2bb66201bec543f17ff84 389 SUPERFAMILY SSF56601 51 374 1.23E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_G111 7f41851d62e2bb66201bec543f17ff84 389 Pfam PF00144 Beta-lactamase 54 379 7.5E-65 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_1119 3d562ff4b23ec32815019ee409165070 452 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 421 5.5E-157 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_1119 3d562ff4b23ec32815019ee409165070 452 Pfam PF05525 Branched-chain amino acid transport protein 10 432 3.7E-162 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 MC28_2702 2a356316161bb115a78cb3964d9036cd 92 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 7 88 2.0E-41 T 14-10-2018 IPR010398 Protein of unknown function DUF997 MC28_2702 2a356316161bb115a78cb3964d9036cd 92 Pfam PF06196 Protein of unknown function (DUF997) 12 88 2.6E-32 T 14-10-2018 IPR010398 Protein of unknown function DUF997 MC28_C027 e490264431a20dda63dc500eaaa67b23 178 Gene3D G3DSA:3.40.50.300 19 174 5.6E-8 T 14-10-2018 MC28_C027 e490264431a20dda63dc500eaaa67b23 178 SUPERFAMILY SSF52540 44 160 1.01E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_C027 e490264431a20dda63dc500eaaa67b23 178 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 46 89 7.5E-6 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain MC28_3195 b990429cb429840104b287cce69a019f 54 Pfam PF13128 Protein of unknown function (DUF3954) 2 48 7.7E-20 T 14-10-2018 IPR025017 Protein of unknown function DUF3954 MC28_4162 4e8c8337c0c0b3f395aefa4575e7258b 164 SUPERFAMILY SSF88946 3 84 1.45E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 MC28_4162 4e8c8337c0c0b3f395aefa4575e7258b 164 Gene3D G3DSA:1.10.1740.10 1 74 2.6E-12 T 14-10-2018 MC28_4162 4e8c8337c0c0b3f395aefa4575e7258b 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 154 1.4E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 MC28_4162 4e8c8337c0c0b3f395aefa4575e7258b 164 Pfam PF08281 Sigma-70, region 4 101 149 1.3E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MC28_4162 4e8c8337c0c0b3f395aefa4575e7258b 164 SUPERFAMILY SSF88659 90 156 6.35E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like MC28_4162 4e8c8337c0c0b3f395aefa4575e7258b 164 Gene3D G3DSA:1.10.10.10 93 156 1.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4162 4e8c8337c0c0b3f395aefa4575e7258b 164 Pfam PF04542 Sigma-70 region 2 13 72 8.2E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 MC28_0211 debab883b89add88096b9bda6ce51110 391 Gene3D G3DSA:1.20.1250.20 5 379 2.3E-37 T 14-10-2018 MC28_0211 debab883b89add88096b9bda6ce51110 391 SUPERFAMILY SSF103473 3 377 1.12E-45 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0211 debab883b89add88096b9bda6ce51110 391 Pfam PF07690 Major Facilitator Superfamily 12 310 4.6E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_0627 780e486a1443b199bd1441006f68938f 447 Pfam PF02386 Cation transport protein 45 427 6.3E-48 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 MC28_0627 780e486a1443b199bd1441006f68938f 447 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 36 418 1.1E-111 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 MC28_0710 eb8f7eaef74a4914a0cf66073b5bf1cb 385 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 42 385 1.1E-76 T 14-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 MC28_0710 eb8f7eaef74a4914a0cf66073b5bf1cb 385 Pfam PF01578 Cytochrome C assembly protein 77 382 1.2E-33 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 MC28_3985 a924c1b91aca53d9968d450f6a7f543f 57 Pfam PF08220 DeoR-like helix-turn-helix domain 1 34 9.4E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 MC28_3985 a924c1b91aca53d9968d450f6a7f543f 57 SUPERFAMILY SSF46785 2 42 1.33E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4105 97fc932f56fb3569e3b1dc5e1b21e120 169 Pfam PF09965 Uncharacterized protein conserved in bacteria (DUF2199) 18 153 5.4E-45 T 14-10-2018 IPR018697 Protein of unknown function DUF2199 MC28_F243 26c1f24662b9dda6af3b5ecca9abbf5a 186 Pfam PF13814 Replication-relaxation 52 137 7.3E-8 T 14-10-2018 IPR025855 Plasmid replication-relaxation MC28_4868 7a3518e172cb507a99a6a9eed19a1b1c 60 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 37 2.5E-5 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_4868 7a3518e172cb507a99a6a9eed19a1b1c 60 Gene3D G3DSA:3.40.120.10 3 47 1.9E-9 T 14-10-2018 MC28_4868 7a3518e172cb507a99a6a9eed19a1b1c 60 SUPERFAMILY SSF53738 3 37 1.37E-5 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MC28_F050 29fe4fb05cdeb0319cc20432f77adc31 624 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 34 623 9.0E-215 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 MC28_F050 29fe4fb05cdeb0319cc20432f77adc31 624 SUPERFAMILY SSF51998 36 602 2.11E-155 T 14-10-2018 MC28_F050 29fe4fb05cdeb0319cc20432f77adc31 624 Gene3D G3DSA:3.20.70.20 48 605 7.6E-203 T 14-10-2018 MC28_F050 29fe4fb05cdeb0319cc20432f77adc31 624 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 35 623 4.8E-206 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 MC28_1672 14ed3f09c16f0d325e24b4e371b44ad6 172 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 1 167 12.708 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MC28_1672 14ed3f09c16f0d325e24b4e371b44ad6 172 Pfam PF02660 Glycerol-3-phosphate acyltransferase 3 169 3.9E-38 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MC28_1672 14ed3f09c16f0d325e24b4e371b44ad6 172 SMART SM01207 1 166 1.2E-46 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MC28_5332 78e7c5f6152d80611ff0a590c0aebdfe 392 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 391 1.7E-57 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 MC28_5332 78e7c5f6152d80611ff0a590c0aebdfe 392 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.0E-20 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 MC28_2935 84ccd0417b5cab55c1ec5290d0d886c7 931 SUPERFAMILY SSF52540 378 587 2.78E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2935 84ccd0417b5cab55c1ec5290d0d886c7 931 Gene3D G3DSA:1.25.40.10 52 176 3.7E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_2935 84ccd0417b5cab55c1ec5290d0d886c7 931 Pfam PF00350 Dynamin family 384 520 2.2E-10 T 14-10-2018 IPR022812 Dynamin superfamily MC28_2935 84ccd0417b5cab55c1ec5290d0d886c7 931 Pfam PF13181 Tetratricopeptide repeat 121 149 0.0059 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2935 84ccd0417b5cab55c1ec5290d0d886c7 931 Gene3D G3DSA:3.40.50.300 384 604 2.8E-23 T 14-10-2018 MC28_2935 84ccd0417b5cab55c1ec5290d0d886c7 931 SUPERFAMILY SSF48452 51 173 1.14E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_3711 46e09fa355124b0ed181edbd82c81c7e 66 Pfam PF11146 Protein of unknown function (DUF2905) 6 62 8.2E-23 T 14-10-2018 IPR021320 Protein of unknown function DUF2905 MC28_3918 48bc3afc17c0b857529fe0d3d8f42a50 131 PIRSF PIRSF021377 1 130 7.4E-55 T 14-10-2018 IPR014229 Sporulation protein YtfJ MC28_3918 48bc3afc17c0b857529fe0d3d8f42a50 131 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 2 122 2.0E-50 T 14-10-2018 IPR014229 Sporulation protein YtfJ MC28_3918 48bc3afc17c0b857529fe0d3d8f42a50 131 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 30 113 1.2E-29 T 14-10-2018 IPR014229 Sporulation protein YtfJ MC28_0398 96c1af48b536c85888f090b5ce479580 248 Pfam PF12227 Protein of unknown function (DUF3603) 35 248 1.5E-113 T 14-10-2018 IPR020909 UPF0736 MC28_0398 96c1af48b536c85888f090b5ce479580 248 Hamap MF_01860 UPF0736 protein . 1 248 51.716 T 14-10-2018 IPR020909 UPF0736 MC28_0762 e3e2455c19f5a42880d6b0b923c1bd18 190 Pfam PF04298 Putative neutral zinc metallopeptidase 1 182 1.4E-81 T 14-10-2018 IPR007395 Putative neutral zinc metallopeptidase MC28_0632 9525059701e40c1b9a6075484cd3adf4 85 Pfam PF13050 Protein of unknown function (DUF3911) 7 83 4.1E-58 T 14-10-2018 IPR025022 Protein of unknown function DUF3911 MC28_3225 c17dec9289b2562e6b8a3a4e65d64f34 305 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 31 285 4.1E-62 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related MC28_3225 c17dec9289b2562e6b8a3a4e65d64f34 305 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 7 287 3.3E-142 T 14-10-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG MC28_1125 9725bd0cd088e54f31898021270e252f 145 Pfam PF02082 Transcriptional regulator 3 83 1.6E-23 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type MC28_1125 9725bd0cd088e54f31898021270e252f 145 SUPERFAMILY SSF46785 4 140 1.4E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_1125 9725bd0cd088e54f31898021270e252f 145 Gene3D G3DSA:1.10.10.10 1 145 4.9E-60 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0785 e3471a9b9236d8e8059946ab7e9353d4 362 Pfam PF10720 Protein of unknown function (DUF2515) 48 349 1.5E-124 T 14-10-2018 IPR019658 Protein of unknown function DUF2515 MC28_2052 aab24d43f6f2dfe9931e4f25a3c0c5eb 171 Pfam PF12867 DinB superfamily 21 159 1.9E-9 T 14-10-2018 IPR024775 DinB-like domain MC28_2052 aab24d43f6f2dfe9931e4f25a3c0c5eb 171 SUPERFAMILY SSF109854 19 160 1.31E-14 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2052 aab24d43f6f2dfe9931e4f25a3c0c5eb 171 Gene3D G3DSA:1.20.120.450 13 168 5.7E-22 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1833 f004c1abee94bab2183226d03f154964 51 Pfam PF07561 Domain of Unknown Function (DUF1540) 5 47 1.1E-15 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 MC28_G143 337f5250ee858bf0cdc09e497e93e427 245 Gene3D G3DSA:2.40.40.60 86 189 9.0E-17 T 14-10-2018 MC28_G143 337f5250ee858bf0cdc09e497e93e427 245 Pfam PF17294 Uncharacterised lipoprotein family 42 228 4.3E-27 T 14-10-2018 IPR035253 Putative lipoprotein, bacteria MC28_4268 4f2c358fb19bc1acf80626acd23688f7 237 Pfam PF02517 CAAX protease self-immunity 143 228 4.5E-20 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_0956 d585a462fe41d82c9c27d350cd66b3c8 395 SMART SM00833 256 371 3.1E-53 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MC28_0956 d585a462fe41d82c9c27d350cd66b3c8 395 SUPERFAMILY SSF52540 2 308 5.84E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0956 d585a462fe41d82c9c27d350cd66b3c8 395 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 371 3.1E-28 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MC28_0956 d585a462fe41d82c9c27d350cd66b3c8 395 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 209 3.8E-57 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain MC28_0956 d585a462fe41d82c9c27d350cd66b3c8 395 Gene3D G3DSA:3.40.50.300 1 228 1.7E-73 T 14-10-2018 MC28_0956 d585a462fe41d82c9c27d350cd66b3c8 395 Gene3D G3DSA:3.30.1220.10 238 371 3.7E-5 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily MC28_G388 ae5f7da6a885ca0a10cc963d29edf5a0 129 Pfam PF00293 NUDIX domain 5 117 5.9E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_G388 ae5f7da6a885ca0a10cc963d29edf5a0 129 SUPERFAMILY SSF55811 3 127 9.34E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_G388 ae5f7da6a885ca0a10cc963d29edf5a0 129 Gene3D G3DSA:3.90.79.10 3 128 7.1E-28 T 14-10-2018 MC28_3356 4068d115c94bae420b66f00e7c6b90ff 490 PIRSF PIRSF005690 7 490 6.1E-136 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_3356 4068d115c94bae420b66f00e7c6b90ff 490 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 22 479 9.1E-152 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_2375 e35d3fd8d93d482e1c7e6a310e8b77e0 312 Gene3D G3DSA:3.40.50.150 9 311 7.4E-47 T 14-10-2018 MC28_2375 e35d3fd8d93d482e1c7e6a310e8b77e0 312 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 17 292 3.2E-42 T 14-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 MC28_2375 e35d3fd8d93d482e1c7e6a310e8b77e0 312 SUPERFAMILY SSF53335 15 311 3.58E-63 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2375 e35d3fd8d93d482e1c7e6a310e8b77e0 312 Pfam PF04072 Leucine carboxyl methyltransferase 19 213 1.1E-48 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 MC28_3934 7330099abb1fe28d804580aaf949d882 382 Gene3D G3DSA:3.90.1570.30 3 141 2.3E-7 T 14-10-2018 MC28_3934 7330099abb1fe28d804580aaf949d882 382 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 23 121 8.7E-10 T 14-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain MC28_3095 dec266e1bf0624a6926f087b906407cb 85 Pfam PF04025 Domain of unknown function (DUF370) 3 75 4.8E-36 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A MC28_3095 dec266e1bf0624a6926f087b906407cb 85 Hamap MF_01503 UPF0296 protein . 1 84 28.228 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A MC28_3095 dec266e1bf0624a6926f087b906407cb 85 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 4 76 3.0E-36 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A MC28_0253 04f9b1d8ba13df56c9629e5f1dbd3a2e 61 Pfam PF14120 YhzD-like protein 1 61 1.1E-26 T 14-10-2018 IPR025544 YhzD-like protein MC28_D152 2bdd2fcb04c1dcf5b532c9da6fe26f94 319 Gene3D G3DSA:1.10.443.10 113 318 5.7E-14 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_D152 2bdd2fcb04c1dcf5b532c9da6fe26f94 319 Pfam PF00589 Phage integrase family 148 309 2.9E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_D152 2bdd2fcb04c1dcf5b532c9da6fe26f94 319 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 9 90 6.7E-10 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MC28_D152 2bdd2fcb04c1dcf5b532c9da6fe26f94 319 SUPERFAMILY SSF56349 137 312 2.71E-20 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_D152 2bdd2fcb04c1dcf5b532c9da6fe26f94 319 Gene3D G3DSA:1.10.150.130 4 99 3.7E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal MC28_0722 1b4e2a30487d1fb34a0974e6952cb782 238 Gene3D G3DSA:3.60.21.10 25 211 8.1E-21 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_0722 1b4e2a30487d1fb34a0974e6952cb782 238 SUPERFAMILY SSF56300 26 237 7.47E-30 T 14-10-2018 MC28_0722 1b4e2a30487d1fb34a0974e6952cb782 238 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 27 187 1.2E-11 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 MC28_0262 3cc6aa0cb7de146ecac31e9aedc2f8ab 60 TIGRFAM TIGR04429 Phr_nterm: Phr family secreted Rap phosphatase inhibitor 1 28 7.3E-10 T 14-10-2018 IPR030968 Phr family, secreted RapG/RapK phosphatase inhibitor MC28_1213 d0e884fdc5055e7895bdb24a28583c97 93 Pfam PF05119 Phage terminase, small subunit 2 75 2.0E-9 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family MC28_5349 4b31cf8764e31931109ffced877a0a91 306 SUPERFAMILY SSF52540 55 281 4.78E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5349 4b31cf8764e31931109ffced877a0a91 306 Gene3D G3DSA:3.40.50.300 50 221 8.8E-33 T 14-10-2018 MC28_5349 4b31cf8764e31931109ffced877a0a91 306 Pfam PF07728 AAA domain (dynein-related subfamily) 67 204 3.0E-26 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 MC28_5349 4b31cf8764e31931109ffced877a0a91 306 SMART SM00382 64 210 1.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_3979 9ecdeb9935dff4b3a036aaa5ce096c22 217 SUPERFAMILY SSF53335 25 209 2.17E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3979 9ecdeb9935dff4b3a036aaa5ce096c22 217 Pfam PF02390 Putative methyltransferase 39 206 3.3E-50 T 14-10-2018 MC28_3979 9ecdeb9935dff4b3a036aaa5ce096c22 217 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 30.085 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 MC28_3979 9ecdeb9935dff4b3a036aaa5ce096c22 217 Gene3D G3DSA:3.40.50.150 1 213 1.3E-70 T 14-10-2018 MC28_3979 9ecdeb9935dff4b3a036aaa5ce096c22 217 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 27 210 3.8E-62 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 MC28_1237 63f259dc9c521ff209a17fee02b70c19 314 SUPERFAMILY SSF53474 122 305 2.06E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1237 63f259dc9c521ff209a17fee02b70c19 314 Pfam PF02230 Phospholipase/Carboxylesterase 194 306 1.9E-6 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 MC28_1237 63f259dc9c521ff209a17fee02b70c19 314 Gene3D G3DSA:3.40.50.1820 105 310 8.0E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3771 8f07fb196a966e27c1290c72c4ab5982 205 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 7 197 6.2E-63 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 MC28_3771 8f07fb196a966e27c1290c72c4ab5982 205 Gene3D G3DSA:3.90.950.10 2 203 6.3E-79 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like MC28_3771 8f07fb196a966e27c1290c72c4ab5982 205 Pfam PF01725 Ham1 family 7 196 9.8E-61 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 MC28_3771 8f07fb196a966e27c1290c72c4ab5982 205 SUPERFAMILY SSF52972 3 199 2.15E-72 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like MC28_3771 8f07fb196a966e27c1290c72c4ab5982 205 Hamap MF_01405 dITP/XTP pyrophosphatase. 5 200 49.587 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 MC28_4339 4c6c16ac362f1d0d7a5708891486a0fa 79 Pfam PF13135 Protein of unknown function (DUF3947) 2 79 1.5E-25 T 14-10-2018 IPR025039 Protein of unknown function DUF3947 MC28_4528 2a2cce729d26627e1686443d73957b7b 495 Pfam PF00361 Proton-conducting membrane transporter 134 432 2.4E-66 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4528 2a2cce729d26627e1686443d73957b7b 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 7.8E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4528 2a2cce729d26627e1686443d73957b7b 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 7.8E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4528 2a2cce729d26627e1686443d73957b7b 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 7.8E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4528 2a2cce729d26627e1686443d73957b7b 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 7.8E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4528 2a2cce729d26627e1686443d73957b7b 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 7.8E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_4528 2a2cce729d26627e1686443d73957b7b 495 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 1 491 4.3E-137 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 MC28_0321 531a9102f767f0ef7a91dbcfbb283687 317 SUPERFAMILY SSF47413 1 39 1.59E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_0321 531a9102f767f0ef7a91dbcfbb283687 317 Gene3D G3DSA:1.10.260.40 1 39 7.2E-10 T 14-10-2018 MC28_0321 531a9102f767f0ef7a91dbcfbb283687 317 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 28 9.3E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_0321 531a9102f767f0ef7a91dbcfbb283687 317 SUPERFAMILY SSF53822 40 310 8.88E-72 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_0321 531a9102f767f0ef7a91dbcfbb283687 317 Gene3D G3DSA:3.40.50.2300 45 287 6.3E-73 T 14-10-2018 MC28_0321 531a9102f767f0ef7a91dbcfbb283687 317 Gene3D G3DSA:3.40.50.2300 139 268 6.3E-73 T 14-10-2018 MC28_0321 531a9102f767f0ef7a91dbcfbb283687 317 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 40 289 9.6E-32 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain MC28_0321 531a9102f767f0ef7a91dbcfbb283687 317 SMART SM00354 1 51 2.9E-10 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 MC28_2428 e118f07206aa6ddad60fba713c5c955f 419 Pfam PF00144 Beta-lactamase 108 395 2.4E-37 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_2428 e118f07206aa6ddad60fba713c5c955f 419 Gene3D G3DSA:3.40.710.10 32 419 6.3E-113 T 14-10-2018 MC28_2428 e118f07206aa6ddad60fba713c5c955f 419 SUPERFAMILY SSF56601 9 409 5.14E-78 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_3439 37420830092a8187b6cb17fdc2a4c29d 181 SUPERFAMILY SSF55729 1 179 8.14E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3439 37420830092a8187b6cb17fdc2a4c29d 181 Gene3D G3DSA:3.40.630.30 3 181 1.7E-41 T 14-10-2018 MC28_3439 37420830092a8187b6cb17fdc2a4c29d 181 Pfam PF13302 Acetyltransferase (GNAT) domain 9 155 4.1E-18 T 14-10-2018 IPR000182 GNAT domain MC28_1604 9cd8cb9c33517fe0290e41e2f8006dc5 141 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 138 1.4E-27 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ MC28_G061 8f937bc52d915fab761f9bf4cc64b7cb 450 Gene3D G3DSA:3.30.300.30 354 436 6.2E-17 T 14-10-2018 MC28_G061 8f937bc52d915fab761f9bf4cc64b7cb 450 Gene3D G3DSA:3.40.50.12780 1 353 8.2E-50 T 14-10-2018 MC28_G061 8f937bc52d915fab761f9bf4cc64b7cb 450 SUPERFAMILY SSF56801 3 448 9.29E-72 T 14-10-2018 MC28_G061 8f937bc52d915fab761f9bf4cc64b7cb 450 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 439 6.7E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain MC28_G061 8f937bc52d915fab761f9bf4cc64b7cb 450 Pfam PF00501 AMP-binding enzyme 15 357 4.4E-31 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 MC28_G061 8f937bc52d915fab761f9bf4cc64b7cb 450 ProSitePatterns PS00455 Putative AMP-binding domain signature. 136 147 - T 14-10-2018 IPR020845 AMP-binding, conserved site MC28_C031 5f091f957941c0459d1e59dce9dee291 280 SUPERFAMILY SSF46785 29 101 3.22E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_C031 5f091f957941c0459d1e59dce9dee291 280 Pfam PF13814 Replication-relaxation 14 207 3.8E-17 T 14-10-2018 IPR025855 Plasmid replication-relaxation MC28_3285 7702953b661ab63d543686e8d608b43d 152 Pfam PF14177 YkyB-like protein 16 137 4.5E-56 T 14-10-2018 IPR025552 YkyB-like protein MC28_0950 8fdee48c8b523288fa663869ba366ddc 350 SUPERFAMILY SSF110296 22 327 2.75E-47 T 14-10-2018 MC28_0950 8fdee48c8b523288fa663869ba366ddc 350 Gene3D G3DSA:2.130.10.10 71 334 2.7E-47 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_2528 8ffbeb66e15a32adf0f96b30ddea0ce4 105 Gene3D G3DSA:1.10.10.10 3 105 7.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2528 8ffbeb66e15a32adf0f96b30ddea0ce4 105 SUPERFAMILY SSF46785 6 101 4.75E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2528 8ffbeb66e15a32adf0f96b30ddea0ce4 105 Pfam PF01638 HxlR-like helix-turn-helix 18 103 1.5E-27 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type MC28_0528 c1ce4739299fe8e7317daabc065b538d 324 SUPERFAMILY SSF51004 29 313 8.89E-46 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily MC28_0528 c1ce4739299fe8e7317daabc065b538d 324 Gene3D G3DSA:2.130.10.10 22 133 9.6E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_0528 c1ce4739299fe8e7317daabc065b538d 324 Gene3D G3DSA:2.130.10.10 134 317 1.2E-26 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_F229 014137d969a69a66a1dfb80bc36fe112 275 SUPERFAMILY SSF52540 24 244 7.37E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_F229 014137d969a69a66a1dfb80bc36fe112 275 Gene3D G3DSA:3.40.50.300 21 262 1.3E-64 T 14-10-2018 MC28_F229 014137d969a69a66a1dfb80bc36fe112 275 SMART SM00382 53 241 5.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_F229 014137d969a69a66a1dfb80bc36fe112 275 Pfam PF00005 ABC transporter 45 192 9.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_G025 24bc60023be06b318aca4b9bc0dd8620 228 Pfam PF00854 POT family 96 187 1.1E-27 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 MC28_G025 24bc60023be06b318aca4b9bc0dd8620 228 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 84 108 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 MC28_G025 24bc60023be06b318aca4b9bc0dd8620 228 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 188 1.6E-63 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 MC28_G025 24bc60023be06b318aca4b9bc0dd8620 228 Gene3D G3DSA:1.20.1250.20 2 187 8.1E-67 T 14-10-2018 MC28_G025 24bc60023be06b318aca4b9bc0dd8620 228 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 MC28_G025 24bc60023be06b318aca4b9bc0dd8620 228 SUPERFAMILY SSF103473 19 185 1.44E-21 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4295 c726161ae0428591916c3f70e26bf372 147 Pfam PF13123 Protein of unknown function (DUF3978) 1 144 6.1E-98 T 14-10-2018 IPR025010 Protein of unknown function DUF3978 MC28_0034 70a593a6b584bb06bb951ae43e4e0459 151 Pfam PF00085 Thioredoxin 59 148 1.4E-16 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 MC28_0034 70a593a6b584bb06bb951ae43e4e0459 151 SUPERFAMILY SSF52833 49 147 8.13E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_0034 70a593a6b584bb06bb951ae43e4e0459 151 Gene3D G3DSA:3.40.30.10 42 147 3.5E-24 T 14-10-2018 MC28_0167 f4172f8f61024750979f7b04b2b8466a 326 Pfam PF00005 ABC transporter 37 187 6.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0167 f4172f8f61024750979f7b04b2b8466a 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 305 1.1E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_0167 f4172f8f61024750979f7b04b2b8466a 326 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0167 f4172f8f61024750979f7b04b2b8466a 326 SMART SM00382 45 237 3.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_0167 f4172f8f61024750979f7b04b2b8466a 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 325 1.6E-30 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 MC28_0167 f4172f8f61024750979f7b04b2b8466a 326 Gene3D G3DSA:3.40.50.300 7 326 8.5E-106 T 14-10-2018 MC28_0167 f4172f8f61024750979f7b04b2b8466a 326 SUPERFAMILY SSF52540 9 259 1.08E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_G187 9ea7445d13a2c16623e22d8a093fda63 100 Pfam PF07282 Putative transposase DNA-binding domain 16 86 4.5E-26 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_G187 9ea7445d13a2c16623e22d8a093fda63 100 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 3 43 4.0E-9 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_1316 50adc1244c1105e6c3cf782ad99fc216 261 Gene3D G3DSA:3.40.630.30 57 260 2.6E-20 T 14-10-2018 MC28_1316 50adc1244c1105e6c3cf782ad99fc216 261 SUPERFAMILY SSF55729 2 260 5.61E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1316 50adc1244c1105e6c3cf782ad99fc216 261 Pfam PF12746 GNAT acetyltransferase 171 259 1.4E-9 T 14-10-2018 IPR027365 GNAT acetyltransferase YdfB-like MC28_0925 59aea040e5129a8319c6003bc894aa49 111 SUPERFAMILY SSF54909 8 106 2.73E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_0925 59aea040e5129a8319c6003bc894aa49 111 Gene3D G3DSA:3.30.70.100 9 101 2.5E-37 T 14-10-2018 MC28_0925 59aea040e5129a8319c6003bc894aa49 111 Pfam PF03992 Antibiotic biosynthesis monooxygenase 30 83 2.8E-7 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain MC28_3141 43c76a0465220ed6d069d49a1ff8ba68 552 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 24 550 8.8E-203 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC MC28_3141 43c76a0465220ed6d069d49a1ff8ba68 552 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 15 552 32.067 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC MC28_3141 43c76a0465220ed6d069d49a1ff8ba68 552 Pfam PF10079 Bacillithiol biosynthesis BshC 15 549 5.9E-181 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC MC28_3141 43c76a0465220ed6d069d49a1ff8ba68 552 PIRSF PIRSF012535 15 552 1.9E-233 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC MC28_3331 d09c85566445e70d700cb9c33275a5c2 170 Pfam PF03079 ARD/ARD' family 3 168 3.5E-43 T 14-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 MC28_3331 d09c85566445e70d700cb9c33275a5c2 170 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 170 26.893 T 14-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 MC28_3331 d09c85566445e70d700cb9c33275a5c2 170 Gene3D G3DSA:2.60.120.10 1 170 9.5E-61 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_3331 d09c85566445e70d700cb9c33275a5c2 170 SUPERFAMILY SSF51182 8 170 6.99E-32 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_2213 307962e53bfe80091cddf279ef7ce7aa 369 Pfam PF01882 Protein of unknown function DUF58 211 289 8.6E-11 T 14-10-2018 IPR002881 Domain of unknown function DUF58 MC28_4336 14e5165f33fb81f4e01642cf37356b3e 337 Gene3D G3DSA:3.60.10.10 34 337 1.9E-32 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_4336 14e5165f33fb81f4e01642cf37356b3e 337 SUPERFAMILY SSF56219 33 337 3.14E-29 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MC28_4369 77c77a5985bffae2810d845fae5be0b6 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 59.591 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4369 77c77a5985bffae2810d845fae5be0b6 251 SUPERFAMILY SSF51351 1 249 1.44E-92 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4369 77c77a5985bffae2810d845fae5be0b6 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 8.6E-61 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4369 77c77a5985bffae2810d845fae5be0b6 251 Gene3D G3DSA:3.20.20.70 2 250 1.4E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_4369 77c77a5985bffae2810d845fae5be0b6 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_4369 77c77a5985bffae2810d845fae5be0b6 251 Pfam PF00121 Triosephosphate isomerase 5 246 1.4E-91 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 MC28_B38 a5f7b9e5f9c756c7c13522cff9adeb9d 186 SUPERFAMILY SSF158499 49 109 9.29E-7 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_B38 a5f7b9e5f9c756c7c13522cff9adeb9d 186 Gene3D G3DSA:1.10.10.630 59 117 2.7E-8 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_B38 a5f7b9e5f9c756c7c13522cff9adeb9d 186 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 66 116 9.0E-7 T 14-10-2018 IPR006343 DnaD domain MC28_B38 a5f7b9e5f9c756c7c13522cff9adeb9d 186 Pfam PF07261 Replication initiation and membrane attachment 69 119 1.5E-8 T 14-10-2018 IPR006343 DnaD domain MC28_4266 bd672e6d7523ddc68a0cd8cf46946fb9 82 Pfam PF07875 Coat F domain 2 63 5.6E-18 T 14-10-2018 IPR012851 Spore coat protein CotF-like MC28_2669 dabfdccf508b3351d78c4dd61c264965 247 SUPERFAMILY SSF55166 84 232 2.04E-38 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_2669 dabfdccf508b3351d78c4dd61c264965 247 Gene3D G3DSA:3.30.1380.10 56 247 7.6E-83 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_2669 dabfdccf508b3351d78c4dd61c264965 247 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 100 228 2.8E-47 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 MC28_2029 8ff77088314d6fc80113846d834fbfff 102 Pfam PF10850 Protein of unknown function (DUF2653) 1 88 2.4E-38 T 14-10-2018 IPR020516 Uncharacterised protein family YxcD MC28_2029 8ff77088314d6fc80113846d834fbfff 102 ProDom PD068665 YXCD 1 102 1.0E-51 T 14-10-2018 IPR020516 Uncharacterised protein family YxcD MC28_5263 1a1562afdd7d836e65f009742acf368c 118 Pfam PF11023 Zinc-ribbon containing domain 4 114 4.1E-59 T 14-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 MC28_5263 1a1562afdd7d836e65f009742acf368c 118 Hamap MF_01502 UPF0295 protein . 2 116 37.608 T 14-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 MC28_5263 1a1562afdd7d836e65f009742acf368c 118 ProDom PD355753 MEMBRANE TRANSMEMBRANE UPF0295 BLI00901/BL05075 BT9727_0449 GK0479 BCE0593 YGZB PRECURSOR BA0538/GBAA0538/BAS0506 4 115 8.0E-61 T 14-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 MC28_1117 807375c07b8985f4b8b0eb2ae6954840 321 Pfam PF01758 Sodium Bile acid symporter family 38 223 3.5E-29 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 MC28_1117 807375c07b8985f4b8b0eb2ae6954840 321 Gene3D G3DSA:1.20.1530.20 1 311 1.3E-42 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily MC28_1104 a80ddc12fbfb56a9d62e939a72ce0a8a 436 SUPERFAMILY SSF110296 54 430 7.32E-20 T 14-10-2018 MC28_1104 a80ddc12fbfb56a9d62e939a72ce0a8a 436 Gene3D G3DSA:2.130.10.10 230 435 2.9E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_0344 9464ceb41b388af20df1e7af651f52e7 422 Pfam PF01435 Peptidase family M48 208 414 1.8E-35 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 MC28_0344 9464ceb41b388af20df1e7af651f52e7 422 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 44 203 1.0E-22 T 14-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 MC28_0344 9464ceb41b388af20df1e7af651f52e7 422 Gene3D G3DSA:3.30.2010.10 203 285 3.0E-25 T 14-10-2018 MC28_1361 7caea00f07cd9d82d1cbc9dbdeda97e6 261 Pfam PF13704 Glycosyl transferase family 2 10 97 5.3E-9 T 14-10-2018 MC28_E042 f07078b60c29228f5e149bd0fcb81cc9 256 Pfam PF13610 DDE domain 95 233 4.4E-49 T 14-10-2018 IPR032874 DDE domain MC28_E042 f07078b60c29228f5e149bd0fcb81cc9 256 SUPERFAMILY SSF53098 92 212 2.47E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_2800 775da9b24b710b30802c473390e47b13 193 Pfam PF01965 DJ-1/PfpI family 9 162 1.0E-29 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 MC28_2800 775da9b24b710b30802c473390e47b13 193 Gene3D G3DSA:3.40.50.880 6 187 6.2E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_2800 775da9b24b710b30802c473390e47b13 193 SUPERFAMILY SSF52317 8 170 1.78E-34 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like MC28_2022 a65f14e50bc9d4121feffb45d509892a 313 SUPERFAMILY SSF54506 1 310 1.78E-58 T 14-10-2018 MC28_2022 a65f14e50bc9d4121feffb45d509892a 313 Gene3D G3DSA:3.10.310.10 144 289 2.6E-50 T 14-10-2018 MC28_2022 a65f14e50bc9d4121feffb45d509892a 313 PIRSF PIRSF029792 1 313 3.9E-82 T 14-10-2018 IPR008794 Proline racemase family MC28_2022 a65f14e50bc9d4121feffb45d509892a 313 Pfam PF05544 Proline racemase 10 310 7.4E-29 T 14-10-2018 IPR008794 Proline racemase family MC28_2022 a65f14e50bc9d4121feffb45d509892a 313 Gene3D G3DSA:3.10.310.10 8 312 2.6E-50 T 14-10-2018 MC28_C047 60629559b5d2c5c968871dfea2161ac6 335 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 50 330 5.9E-69 T 14-10-2018 IPR010106 Recombination-promoting nuclease RpnA MC28_C047 60629559b5d2c5c968871dfea2161ac6 335 Pfam PF12784 PD-(D/E)XK nuclease family transposase 49 282 4.2E-64 T 14-10-2018 MC28_4065 801d4af804866f6c78ad737e561c8012 700 Gene3D G3DSA:3.40.720.10 331 639 1.4E-40 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_4065 801d4af804866f6c78ad737e561c8012 700 Pfam PF00884 Sulfatase 338 633 3.3E-31 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 MC28_4065 801d4af804866f6c78ad737e561c8012 700 SUPERFAMILY SSF53649 395 581 4.19E-19 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_3633 a3e9c1025403e321826787044cd5c744 498 Pfam PF16244 Domain of unknown function (DUF4901) 11 240 7.2E-113 T 14-10-2018 IPR032599 Protein of unknown function DUF4901 MC28_1992 0ead36cf001aaeeeb71ae25d3228fd18 235 SUPERFAMILY SSF53335 1 201 6.14E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_1992 0ead36cf001aaeeeb71ae25d3228fd18 235 Gene3D G3DSA:3.40.50.150 29 235 1.1E-44 T 14-10-2018 MC28_1992 0ead36cf001aaeeeb71ae25d3228fd18 235 Pfam PF08241 Methyltransferase domain 49 141 2.1E-24 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 SMART SM00382 359 529 2.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 SMART SM00382 28 236 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 Pfam PF00005 ABC transporter 20 191 3.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 Gene3D G3DSA:3.40.50.300 2 285 5.7E-71 T 14-10-2018 MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 Gene3D G3DSA:3.40.50.300 297 559 1.7E-57 T 14-10-2018 MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 Pfam PF12848 ABC transporter 230 324 2.4E-23 T 14-10-2018 IPR032781 ABC-transporter extension domain MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 Pfam PF00005 ABC transporter 351 478 6.8E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 SUPERFAMILY SSF52540 323 534 1.61E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_4916 b4f6c78b996ac62b582bf4cc196d3460 626 SUPERFAMILY SSF52540 6 244 2.62E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2549 da537171cb818a6b7d80a6d57df895d2 114 Gene3D G3DSA:1.10.10.10 1 114 3.1E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2549 da537171cb818a6b7d80a6d57df895d2 114 SUPERFAMILY SSF46785 2 106 1.87E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2549 da537171cb818a6b7d80a6d57df895d2 114 Pfam PF01638 HxlR-like helix-turn-helix 14 102 2.0E-39 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type MC28_0216 0f41d26175133e31aa3d9f7a3224e4f9 217 Pfam PF10067 Predicted membrane protein (DUF2306) 54 200 1.0E-53 T 14-10-2018 IPR018750 Protein of unknown function DUF2306, membrane MC28_0116 cc70774fb4632a54766648eb0c1a03e9 112 Gene3D G3DSA:1.10.10.10 14 111 2.0E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0116 cc70774fb4632a54766648eb0c1a03e9 112 Pfam PF01638 HxlR-like helix-turn-helix 26 109 2.8E-28 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type MC28_0116 cc70774fb4632a54766648eb0c1a03e9 112 SUPERFAMILY SSF46785 13 109 1.6E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4823 9449923bc88e8a1500a28c380f65608d 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 38.224 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4823 9449923bc88e8a1500a28c380f65608d 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 6.9E-84 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4823 9449923bc88e8a1500a28c380f65608d 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 7.6E-74 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 MC28_4823 9449923bc88e8a1500a28c380f65608d 207 SUPERFAMILY SSF52166 1 206 4.71E-86 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 MC28_4823 9449923bc88e8a1500a28c380f65608d 207 Gene3D G3DSA:3.40.1370.10 2 207 2.2E-85 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 MC28_2145 2a5e40181d6380166f4c0656c7db6db8 106 Pfam PF10710 Protein of unknown function (DUF2512) 1 96 2.8E-31 T 14-10-2018 IPR019649 Protein of unknown function DUF2512 MC28_1398 3ac83562c23bdb1524bb30c22349addd 221 Gene3D G3DSA:1.10.150.240 16 82 1.4E-62 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_1398 3ac83562c23bdb1524bb30c22349addd 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 84 176 2.0E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 MC28_1398 3ac83562c23bdb1524bb30c22349addd 221 SUPERFAMILY SSF56784 1 213 1.29E-52 T 14-10-2018 IPR036412 HAD-like superfamily MC28_1398 3ac83562c23bdb1524bb30c22349addd 221 Gene3D G3DSA:3.40.50.1000 5 204 1.4E-62 T 14-10-2018 IPR023214 HAD superfamily MC28_1398 3ac83562c23bdb1524bb30c22349addd 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 2.1E-31 T 14-10-2018 MC28_1555 738ca6eb65015c58b76db0d462d05810 384 Gene3D G3DSA:1.20.1250.20 4 371 1.8E-59 T 14-10-2018 MC28_1555 738ca6eb65015c58b76db0d462d05810 384 SUPERFAMILY SSF103473 7 375 2.22E-64 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1555 738ca6eb65015c58b76db0d462d05810 384 Pfam PF07690 Major Facilitator Superfamily 13 265 5.7E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1555 738ca6eb65015c58b76db0d462d05810 384 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 78 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MC28_4031 be2b24642a4f1b9f772eb9e978a63c8d 190 Gene3D G3DSA:3.40.50.150 1 190 5.8E-69 T 14-10-2018 MC28_4031 be2b24642a4f1b9f772eb9e978a63c8d 190 SUPERFAMILY SSF53335 13 163 1.22E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4031 be2b24642a4f1b9f772eb9e978a63c8d 190 Pfam PF06962 Putative rRNA methylase 48 188 3.3E-50 T 14-10-2018 IPR010719 Putative rRNA methylase MC28_0538 c51b2134cda7d134639cafab32ed8b95 262 SUPERFAMILY SSF103473 11 246 1.15E-7 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_0538 c51b2134cda7d134639cafab32ed8b95 262 Pfam PF03741 Integral membrane protein TerC family 16 208 6.1E-52 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 MC28_0538 c51b2134cda7d134639cafab32ed8b95 262 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 249 1.8E-92 T 14-10-2018 IPR022493 Integral membrane YkoY MC28_0538 c51b2134cda7d134639cafab32ed8b95 262 Gene3D G3DSA:1.20.1250.20 5 251 1.7E-7 T 14-10-2018 MC28_2232 378bcdcbeea5ac0d524f2e7bc61a1c53 314 Gene3D G3DSA:3.40.710.10 3 307 5.9E-72 T 14-10-2018 MC28_2232 378bcdcbeea5ac0d524f2e7bc61a1c53 314 Pfam PF00144 Beta-lactamase 22 293 2.2E-33 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_2232 378bcdcbeea5ac0d524f2e7bc61a1c53 314 SUPERFAMILY SSF56601 15 312 5.26E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_4605 a59c35ce54ec8f066ea136d638470e08 390 PRINTS PR01035 Tetracycline resistance protein signature 21 37 3.7E-15 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4605 a59c35ce54ec8f066ea136d638470e08 390 PRINTS PR01035 Tetracycline resistance protein signature 134 156 3.7E-15 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4605 a59c35ce54ec8f066ea136d638470e08 390 PRINTS PR01035 Tetracycline resistance protein signature 162 182 3.7E-15 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MC28_4605 a59c35ce54ec8f066ea136d638470e08 390 Gene3D G3DSA:1.20.1250.20 4 376 1.6E-63 T 14-10-2018 MC28_4605 a59c35ce54ec8f066ea136d638470e08 390 SUPERFAMILY SSF103473 4 382 5.89E-66 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_4605 a59c35ce54ec8f066ea136d638470e08 390 Pfam PF07690 Major Facilitator Superfamily 16 344 4.3E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_3146 09b54538388715f23b194b3f7d50795b 166 Pfam PF02620 Uncharacterized ACR, COG1399 56 163 4.8E-22 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD MC28_4259 7193d0ea9df971a8aeb68f61fed1de59 80 Pfam PF13073 Protein of unknown function (DUF3937) 1 72 1.2E-48 T 14-10-2018 IPR025068 Protein of unknown function DUF3937 MC28_5072 6dc43867af892031e9a7bf66a96d159a 222 ProDom PD210561 YWRJ 1 222 2.0E-122 T 14-10-2018 IPR020173 Uncharacterised protein family YwrJ MC28_F041 e383758b4b35b209c9f15eff4e692c89 555 Gene3D G3DSA:1.10.260.40 463 554 5.4E-8 T 14-10-2018 MC28_F041 e383758b4b35b209c9f15eff4e692c89 555 SUPERFAMILY SSF47413 492 548 9.52E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_F041 e383758b4b35b209c9f15eff4e692c89 555 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 505 536 1.0E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_0826 caea39ec9287fd3d8fe99feeda2b5386 90 Pfam PF10752 Protein of unknown function (DUF2533) 1 83 5.0E-38 T 14-10-2018 IPR019688 Protein of unknown function DUF2533 MC28_2610 33ccc4f3f0db35e9114ac6d8c7df8b78 178 Gene3D G3DSA:1.20.120.450 23 168 4.3E-32 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2610 33ccc4f3f0db35e9114ac6d8c7df8b78 178 Pfam PF12867 DinB superfamily 30 164 2.6E-20 T 14-10-2018 IPR024775 DinB-like domain MC28_2610 33ccc4f3f0db35e9114ac6d8c7df8b78 178 SUPERFAMILY SSF109854 6 167 4.73E-37 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_5205 66eb9acff8335806517788d409de7d56 643 SUPERFAMILY SSF75005 135 311 1.18E-11 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily MC28_5205 66eb9acff8335806517788d409de7d56 643 Gene3D G3DSA:2.115.10.20 228 411 1.1E-7 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily MC28_0544 d4ae43c5b16524a6e722edb9096635c9 173 TIGRFAM TIGR02132 phaR_Bmeg: polyhydroxyalkanoic acid synthase, PhaR subunit 15 148 4.8E-75 T 14-10-2018 IPR011729 Polyhydroxyalkanoic acid synthase, PhaR subunit MC28_E015 04223eb3bda44d462163defdc3772ee8 191 Gene3D G3DSA:3.40.50.300 34 191 2.7E-6 T 14-10-2018 MC28_G348 1f5e474e3e507216defec850746fe763 131 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 4 102 9.1E-6 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component MC28_G348 1f5e474e3e507216defec850746fe763 131 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 5 128 8.0E-8 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component MC28_4460 228b3b3a3c8d2b1b631c64d4c19af8d0 452 PRINTS PR00758 Arsenical pump membrane protein signature 385 410 3.1E-24 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_4460 228b3b3a3c8d2b1b631c64d4c19af8d0 452 PRINTS PR00758 Arsenical pump membrane protein signature 344 366 3.1E-24 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_4460 228b3b3a3c8d2b1b631c64d4c19af8d0 452 PRINTS PR00758 Arsenical pump membrane protein signature 418 442 3.1E-24 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_4460 228b3b3a3c8d2b1b631c64d4c19af8d0 452 PRINTS PR00758 Arsenical pump membrane protein signature 105 129 3.1E-24 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_4460 228b3b3a3c8d2b1b631c64d4c19af8d0 452 Pfam PF02040 Arsenical pump membrane protein 8 446 1.7E-68 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 MC28_3953 ca44c77ca1f99ec30abf99f1cc1cb47f 73 Pfam PF13055 Protein of unknown function (DUF3917) 1 71 1.7E-49 T 14-10-2018 IPR025027 Protein of unknown function DUF3917 MC28_2201 82c756a9064ef81c930a5026cffb050d 312 Gene3D G3DSA:3.40.50.300 16 182 4.0E-46 T 14-10-2018 MC28_2201 82c756a9064ef81c930a5026cffb050d 312 PIRSF PIRSF002849 1 308 5.8E-126 T 14-10-2018 MC28_2201 82c756a9064ef81c930a5026cffb050d 312 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 4.6E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 MC28_2201 82c756a9064ef81c930a5026cffb050d 312 Gene3D G3DSA:1.10.8.300 196 303 1.3E-31 T 14-10-2018 MC28_2201 82c756a9064ef81c930a5026cffb050d 312 SUPERFAMILY SSF52540 5 278 4.3E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5000 96bfe5acbc9f2b260b56f4b1de8b8027 263 Pfam PF03567 Sulfotransferase family 23 258 2.2E-9 T 14-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 MC28_2105 eb902100feb097b2184e75fecdb69ec5 282 Gene3D G3DSA:1.10.3720.10 75 264 4.1E-20 T 14-10-2018 IPR035906 MetI-like superfamily MC28_2105 eb902100feb097b2184e75fecdb69ec5 282 SUPERFAMILY SSF161098 76 255 8.63E-29 T 14-10-2018 IPR035906 MetI-like superfamily MC28_2105 eb902100feb097b2184e75fecdb69ec5 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 267 3.9E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_3572 9e65c9d38d7091658cc2b0f6629991ef 277 Pfam PF00950 ABC 3 transport family 7 270 7.6E-64 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 MC28_3572 9e65c9d38d7091658cc2b0f6629991ef 277 Gene3D G3DSA:1.10.3470.10 48 276 2.6E-10 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_3572 9e65c9d38d7091658cc2b0f6629991ef 277 SUPERFAMILY SSF81345 3 267 8.11E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_G169 250ac6afd9e8214b0a68b0725a5b3d25 220 SUPERFAMILY SSF53098 49 220 1.06E-20 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_G169 250ac6afd9e8214b0a68b0725a5b3d25 220 Pfam PF01609 Transposase DDE domain 129 218 1.1E-13 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_2922 0875172ed336a145efdb6619a399bde5 146 Pfam PF10787 Uncharacterised protein from bacillus cereus group 7 137 4.0E-60 T 14-10-2018 IPR019723 Uncharacterised protein, YfmQ MC28_1003 894aa4e59758b0edd6a0c040be1e8f10 203 Pfam PF13761 Domain of unknown function (DUF4166) 16 199 2.5E-59 T 14-10-2018 IPR025311 Domain of unknown function DUF4166 MC28_3680 e55f3bc9bd859eeea5e1cf08a4e7a63f 114 Pfam PF14470 Bacterial PH domain 12 109 6.4E-13 T 14-10-2018 IPR039519 YokE-like, PH domain MC28_G366 bcdf14a9ed4b08bf69a5614e76891199 168 Pfam PF05105 Bacteriophage holin family 44 150 3.7E-13 T 14-10-2018 IPR006480 Bacteriophage holin family MC28_G366 bcdf14a9ed4b08bf69a5614e76891199 168 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 38 139 8.6E-12 T 14-10-2018 IPR006480 Bacteriophage holin family MC28_5239 2785efa1a51bc61a3de3c6902bea79fb 169 SUPERFAMILY SSF55729 3 142 2.47E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_5239 2785efa1a51bc61a3de3c6902bea79fb 169 Pfam PF13302 Acetyltransferase (GNAT) domain 35 116 8.2E-11 T 14-10-2018 IPR000182 GNAT domain MC28_5239 2785efa1a51bc61a3de3c6902bea79fb 169 Gene3D G3DSA:3.40.630.30 1 164 2.1E-18 T 14-10-2018 MC28_2033 b189e6a4ac0135c2c8a597e233fda00e 165 Gene3D G3DSA:3.40.630.30 4 164 7.3E-29 T 14-10-2018 MC28_2033 b189e6a4ac0135c2c8a597e233fda00e 165 Pfam PF13302 Acetyltransferase (GNAT) domain 6 141 1.8E-13 T 14-10-2018 IPR000182 GNAT domain MC28_2033 b189e6a4ac0135c2c8a597e233fda00e 165 SUPERFAMILY SSF55729 6 145 1.12E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4871 f849eb7be7f27956020af92fa35934e6 57 SUPERFAMILY SSF52980 1 45 1.02E-5 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 MC28_4871 f849eb7be7f27956020af92fa35934e6 57 Gene3D G3DSA:3.40.1350.10 1 57 9.3E-7 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 MC28_C091 3b0bdcff98fb747bee1d975439dda987 132 Pfam PF14040 Deoxyribonuclease NucA/NucB 36 131 9.7E-14 T 14-10-2018 IPR029476 Deoxyribonuclease NucA/NucB MC28_5420 1ad78ee62907f3975fea278dd55b2814 430 PIRSF PIRSF005353 1 430 2.0E-145 T 14-10-2018 IPR026033 Purine permease PbuG-like MC28_5420 1ad78ee62907f3975fea278dd55b2814 430 Pfam PF00860 Permease family 13 393 4.2E-47 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 MC28_B62 61f0fb3c17742e2130a84a2b7b44fcd6 114 Pfam PF10782 Zinc-finger 8 55 1.5E-4 T 14-10-2018 IPR019718 Protein of unknown function DUF2602 MC28_4563 8734ffc8791804a11cf75dd0608d656b 152 Gene3D G3DSA:3.40.630.30 3 135 6.7E-6 T 14-10-2018 MC28_1906 e1a08676b0df6a28c257b35774a28883 187 SUPERFAMILY SSF55729 5 175 9.46E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1906 e1a08676b0df6a28c257b35774a28883 187 Pfam PF00583 Acetyltransferase (GNAT) family 41 155 3.7E-10 T 14-10-2018 IPR000182 GNAT domain MC28_1906 e1a08676b0df6a28c257b35774a28883 187 Gene3D G3DSA:3.40.630.30 1 155 3.4E-16 T 14-10-2018 MC28_0362 7ceaf072df6bea8ac55692160db73e7a 64 PIRSF PIRSF037666 1 59 9.8E-35 T 14-10-2018 IPR017257 Spore germination protein GerPD, predicted MC28_1800 c7615928a120650058fb915555d0b594 197 SUPERFAMILY SSF55729 11 184 1.03E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1800 c7615928a120650058fb915555d0b594 197 Gene3D G3DSA:3.40.630.30 9 196 7.4E-33 T 14-10-2018 MC28_1800 c7615928a120650058fb915555d0b594 197 Pfam PF13302 Acetyltransferase (GNAT) domain 17 169 1.5E-20 T 14-10-2018 IPR000182 GNAT domain MC28_1123 c6b96ea1e3a36b1afd6189f0260e1067 283 SUPERFAMILY SSF103481 168 271 3.27E-9 T 14-10-2018 MC28_1123 c6b96ea1e3a36b1afd6189f0260e1067 283 SUPERFAMILY SSF103481 25 125 9.42E-15 T 14-10-2018 MC28_1123 c6b96ea1e3a36b1afd6189f0260e1067 283 Pfam PF00892 EamA-like transporter family 1 122 8.0E-25 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_1123 c6b96ea1e3a36b1afd6189f0260e1067 283 Pfam PF00892 EamA-like transporter family 133 268 1.2E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_0295 77ee9f2c6fc68b1b15713ae6c5176ee1 217 Gene3D G3DSA:2.160.20.100 5 216 3.1E-53 T 14-10-2018 MC28_0295 77ee9f2c6fc68b1b15713ae6c5176ee1 217 Pfam PF13599 Pentapeptide repeats (9 copies) 54 125 8.6E-13 T 14-10-2018 IPR001646 Pentapeptide repeat MC28_0295 77ee9f2c6fc68b1b15713ae6c5176ee1 217 Pfam PF13599 Pentapeptide repeats (9 copies) 128 197 7.5E-9 T 14-10-2018 IPR001646 Pentapeptide repeat MC28_0295 77ee9f2c6fc68b1b15713ae6c5176ee1 217 SUPERFAMILY SSF141571 38 216 2.75E-45 T 14-10-2018 MC28_4883 bae8ce54f071f24a5d39288920cfd3a9 589 Pfam PF13139 Domain of unknown function (DUF3981) 30 143 1.4E-73 T 14-10-2018 IPR025043 Domain of unknown function DUF3981 MC28_2489 2744a6d32fd0324f4a17c788e74dd134 113 Pfam PF04226 Transglycosylase associated protein 64 108 2.4E-9 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 MC28_1129 651e3d409a2f7b9a7703b5157d243af9 536 Pfam PF01425 Amidase 89 517 4.5E-74 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_1129 651e3d409a2f7b9a7703b5157d243af9 536 Gene3D G3DSA:3.90.1300.10 24 536 6.0E-208 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_1129 651e3d409a2f7b9a7703b5157d243af9 536 SUPERFAMILY SSF75304 68 533 4.32E-94 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MC28_2070 66987ab4a9a2331093649f5f1a43dac5 207 Pfam PF13171 Protein of unknown function (DUF4004) 4 199 2.7E-84 T 14-10-2018 IPR025063 Protein of unknown function DUF4004 MC28_0949 8e94aa470cd39dd2002bf733c9d7120f 381 Pfam PF13786 Domain of unknown function (DUF4179) 44 150 2.2E-16 T 14-10-2018 IPR025436 Domain of unknown function DUF4179 MC28_0949 8e94aa470cd39dd2002bf733c9d7120f 381 Gene3D G3DSA:2.60.40.1640 237 381 1.0E-54 T 14-10-2018 MC28_0949 8e94aa470cd39dd2002bf733c9d7120f 381 Gene3D G3DSA:2.60.40.1630 75 236 3.8E-40 T 14-10-2018 MC28_0687 d66f7f2b6b525974e1f06f678a6d36b2 262 Pfam PF01925 Sulfite exporter TauE/SafE 3 255 9.4E-57 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 MC28_2780 7885f81253b5abdf85d958a216e6b916 268 Gene3D G3DSA:3.40.630.30 61 248 1.0E-13 T 14-10-2018 MC28_2780 7885f81253b5abdf85d958a216e6b916 268 SUPERFAMILY SSF55729 94 237 4.33E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_G190 2517358ccd7f0e4f6881fb6f6a64e264 151 Gene3D G3DSA:3.40.630.30 8 144 1.6E-28 T 14-10-2018 MC28_G190 2517358ccd7f0e4f6881fb6f6a64e264 151 SUPERFAMILY SSF55729 6 139 2.1E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_G190 2517358ccd7f0e4f6881fb6f6a64e264 151 Pfam PF00583 Acetyltransferase (GNAT) family 24 138 3.3E-12 T 14-10-2018 IPR000182 GNAT domain MC28_0014 3066806fff294685678fe4a16106f98b 268 Pfam PF08543 Phosphomethylpyrimidine kinase 13 259 2.4E-102 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 MC28_0014 3066806fff294685678fe4a16106f98b 268 Gene3D G3DSA:3.40.1190.20 1 267 2.0E-107 T 14-10-2018 IPR029056 Ribokinase-like MC28_0014 3066806fff294685678fe4a16106f98b 268 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 261 4.4E-109 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MC28_0014 3066806fff294685678fe4a16106f98b 268 SUPERFAMILY SSF53613 1 264 3.74E-85 T 14-10-2018 IPR029056 Ribokinase-like MC28_4096 d696933bdb73379a4d2d216a8a0ac51c 229 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 14 117 4.1E-33 T 14-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 MC28_4096 d696933bdb73379a4d2d216a8a0ac51c 229 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 16 214 1.5E-71 T 14-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 MC28_4096 d696933bdb73379a4d2d216a8a0ac51c 229 Gene3D G3DSA:1.10.1760.20 12 218 1.7E-64 T 14-10-2018 MC28_0958 019591b76917fd6a5b27aae72e378a1b 294 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 30 287 4.5E-68 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 MC28_0958 019591b76917fd6a5b27aae72e378a1b 294 Pfam PF09323 Domain of unknown function (DUF1980) 12 199 5.2E-47 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 MC28_2562 b1e1807c7a661fb65a9d36900481fdc3 279 SUPERFAMILY SSF56112 1 272 2.92E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_2562 b1e1807c7a661fb65a9d36900481fdc3 279 Gene3D G3DSA:3.90.1200.10 95 258 3.4E-12 T 14-10-2018 MC28_2562 b1e1807c7a661fb65a9d36900481fdc3 279 Pfam PF01636 Phosphotransferase enzyme family 23 212 1.3E-7 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_3117 45f495af6fc9e1b6a836af265f3db0ac 109 PIRSF PIRSF026544 1 109 3.3E-49 T 14-10-2018 IPR016841 Transcription regulator DksA-related, predicted MC28_3117 45f495af6fc9e1b6a836af265f3db0ac 109 Gene3D G3DSA:1.20.120.910 2 103 2.2E-12 T 14-10-2018 MC28_0443 d24806070a7feca8c55c4ef9d7bef593 174 Pfam PF14153 Spore coat protein CotO 13 174 7.4E-48 T 14-10-2018 IPR025439 Spore coat protein CotO MC28_2079 d05119c086f2a11a0105fd5f1fb02c56 62 Pfam PF13113 Protein of unknown function (DUF3970) 1 56 4.6E-22 T 14-10-2018 IPR025088 Protein of unknown function DUF3970 MC28_3337 a15f333d68b7cf4cd5f97b0211a23f75 205 SUPERFAMILY SSF55469 5 203 1.28E-52 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_3337 a15f333d68b7cf4cd5f97b0211a23f75 205 Gene3D G3DSA:3.40.109.10 1 204 9.2E-53 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 MC28_3337 a15f333d68b7cf4cd5f97b0211a23f75 205 Pfam PF00881 Nitroreductase family 12 183 9.2E-30 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 MC28_3310 e476a222b8a5b8ba7e7bb44fac300569 143 Pfam PF13162 Protein of unknown function (DUF3997) 28 132 9.9E-39 T 14-10-2018 IPR025059 Protein of unknown function DUF3997 MC28_G012 edb26c8a37b431a33bcb99b7b809327c 298 Pfam PF01261 Xylose isomerase-like TIM barrel 37 249 1.2E-25 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain MC28_G012 edb26c8a37b431a33bcb99b7b809327c 298 SUPERFAMILY SSF51658 8 294 3.93E-57 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily MC28_G012 edb26c8a37b431a33bcb99b7b809327c 298 Gene3D G3DSA:3.20.20.150 2 295 1.7E-80 T 14-10-2018 MC28_G012 edb26c8a37b431a33bcb99b7b809327c 298 Hamap MF_01672 Inosose dehydratase [iolE]. 2 298 58.565 T 14-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 MC28_G012 edb26c8a37b431a33bcb99b7b809327c 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 7 295 5.4E-129 T 14-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 MC28_1718 1bdd12251c26964bcb11a0cdf2c3c09c 505 PIRSF PIRSF005690 14 502 6.2E-168 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_1718 1bdd12251c26964bcb11a0cdf2c3c09c 505 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 33 487 2.0E-166 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_3869 5c61904b29328e843bab34dc00903a2c 157 Gene3D G3DSA:3.10.129.10 9 157 9.5E-28 T 14-10-2018 MC28_3869 5c61904b29328e843bab34dc00903a2c 157 SUPERFAMILY SSF54637 13 142 2.93E-23 T 14-10-2018 IPR029069 HotDog domain superfamily MC28_3869 5c61904b29328e843bab34dc00903a2c 157 Pfam PF01575 MaoC like domain 24 124 3.5E-8 T 14-10-2018 IPR002539 MaoC-like dehydratase domain MC28_2598 be9e4f3ea007a25e57f758399c654b17 230 SUPERFAMILY SSF46785 151 226 2.5E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2598 be9e4f3ea007a25e57f758399c654b17 230 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 9.3E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_2598 be9e4f3ea007a25e57f758399c654b17 230 Pfam PF13545 Crp-like helix-turn-helix domain 154 224 1.9E-8 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MC28_2598 be9e4f3ea007a25e57f758399c654b17 230 Gene3D G3DSA:1.10.10.10 151 227 5.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2598 be9e4f3ea007a25e57f758399c654b17 230 SUPERFAMILY SSF51206 21 140 2.09E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like MC28_2598 be9e4f3ea007a25e57f758399c654b17 230 Gene3D G3DSA:2.60.120.10 9 146 5.5E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_2860 1854f221649f8a31dae7635ec51306d3 374 Pfam PF00534 Glycosyl transferases group 1 174 339 2.1E-41 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_2860 1854f221649f8a31dae7635ec51306d3 374 SUPERFAMILY SSF53756 10 359 3.63E-72 T 14-10-2018 MC28_2860 1854f221649f8a31dae7635ec51306d3 374 Pfam PF13477 Glycosyl transferase 4-like 7 135 1.3E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 MC28_2860 1854f221649f8a31dae7635ec51306d3 374 Gene3D G3DSA:3.40.50.2000 161 346 3.9E-75 T 14-10-2018 MC28_2860 1854f221649f8a31dae7635ec51306d3 374 Gene3D G3DSA:3.40.50.2000 16 359 3.9E-75 T 14-10-2018 MC28_4898 261421f0e7fa7b2d252e6cfb2036b57e 200 Pfam PF04973 Nicotinamide mononucleotide transporter 9 188 1.2E-42 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 MC28_4898 261421f0e7fa7b2d252e6cfb2036b57e 200 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 8 191 3.4E-46 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 MC28_1348 2b39ba2e09f57fdca68fc502f81b7a3d 156 Pfam PF02391 MoaE protein 10 119 3.5E-35 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 MC28_1348 2b39ba2e09f57fdca68fc502f81b7a3d 156 SUPERFAMILY SSF54690 5 138 3.79E-46 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 MC28_1348 2b39ba2e09f57fdca68fc502f81b7a3d 156 Gene3D G3DSA:3.90.1170.40 3 147 1.6E-52 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 MC28_4107 83aac1fd89e98a96e42cad563e127ba0 257 Pfam PF14080 Domain of unknown function (DUF4261) 157 238 3.7E-14 T 14-10-2018 IPR025357 Domain of unknown function DUF4261 MC28_3977 87ce79e2befdd55dfc323a3174f129fa 103 Pfam PF03413 Peptidase propeptide and YPEB domain 30 100 3.3E-9 T 14-10-2018 IPR025711 PepSY domain MC28_5305 b2d9cc22026920d5fc03ddf7b41dcc75 382 SUPERFAMILY SSF53383 18 378 4.76E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase MC28_5305 b2d9cc22026920d5fc03ddf7b41dcc75 382 Gene3D G3DSA:3.40.640.10 8 373 3.9E-116 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 MC28_5305 b2d9cc22026920d5fc03ddf7b41dcc75 382 Pfam PF00155 Aminotransferase class I and II 52 372 2.2E-14 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MC28_G152 bfcde906bbae01820bc8314dd0830d9c 902 Pfam PF03272 Putative mucin or carbohydrate-binding module 781 899 1.1E-23 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_G152 bfcde906bbae01820bc8314dd0830d9c 902 Pfam PF03272 Putative mucin or carbohydrate-binding module 369 482 1.5E-28 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_G152 bfcde906bbae01820bc8314dd0830d9c 902 Pfam PF03272 Putative mucin or carbohydrate-binding module 642 760 8.0E-24 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_G152 bfcde906bbae01820bc8314dd0830d9c 902 Pfam PF03272 Putative mucin or carbohydrate-binding module 503 621 9.9E-25 T 14-10-2018 IPR004954 Putative mucin/carbohydrate-binding domain MC28_G152 bfcde906bbae01820bc8314dd0830d9c 902 Pfam PF11958 Domain of unknown function (DUF3472) 81 239 9.8E-30 T 14-10-2018 IPR021862 Protein of unknown function DUF3472 MC28_0138 0551fb9c12d25278f8f981a9ad4f5d90 372 PIRSF PIRSF032178 1 372 6.0E-136 T 14-10-2018 IPR016991 Protein of unknown function UCP032178 MC28_0138 0551fb9c12d25278f8f981a9ad4f5d90 372 Pfam PF04286 Protein of unknown function (DUF445) 8 370 4.1E-84 T 14-10-2018 IPR007383 Protein of unknown function DUF445 MC28_4939 26ffb43a1fe7e57a41a18a4bb5ac01e7 119 Gene3D G3DSA:3.90.470.20 1 119 2.4E-39 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 MC28_4939 26ffb43a1fe7e57a41a18a4bb5ac01e7 119 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 25.178 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 MC28_4939 26ffb43a1fe7e57a41a18a4bb5ac01e7 119 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 118 3.9E-37 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 MC28_4939 26ffb43a1fe7e57a41a18a4bb5ac01e7 119 SUPERFAMILY SSF56214 1 115 1.44E-33 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 MC28_4939 26ffb43a1fe7e57a41a18a4bb5ac01e7 119 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 11 116 2.0E-52 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 MC28_4939 26ffb43a1fe7e57a41a18a4bb5ac01e7 119 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 116 1.1E-29 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 MC28_4939 26ffb43a1fe7e57a41a18a4bb5ac01e7 119 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 110 4.6E-20 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 MC28_4232 28d472bc86502e54fe23fad2ef04c2ae 192 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 12 164 4.6E-21 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like MC28_F138 bbf55b545e6d6edf4e51fd13be8d70c0 373 Pfam PF01385 Probable transposase 166 275 9.9E-25 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 MC28_F138 bbf55b545e6d6edf4e51fd13be8d70c0 373 Pfam PF07282 Putative transposase DNA-binding domain 289 359 4.0E-25 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_F138 bbf55b545e6d6edf4e51fd13be8d70c0 373 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 243 316 1.0E-14 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal MC28_F138 bbf55b545e6d6edf4e51fd13be8d70c0 373 Pfam PF12323 Helix-turn-helix domain 2 48 9.5E-20 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain MC28_0629 6217c2568c36bb5f2f128ab34f49acdd 155 PIRSF PIRSF021377 20 154 1.4E-46 T 14-10-2018 IPR014229 Sporulation protein YtfJ MC28_0629 6217c2568c36bb5f2f128ab34f49acdd 155 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 22 151 2.1E-45 T 14-10-2018 IPR014229 Sporulation protein YtfJ MC28_0629 6217c2568c36bb5f2f128ab34f49acdd 155 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 50 147 8.3E-25 T 14-10-2018 IPR014229 Sporulation protein YtfJ MC28_3629 23c4b8d34daac2bdf7b1ad17d81ebdea 51 Gene3D G3DSA:1.10.287.1100 9 42 2.4E-15 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily MC28_3629 23c4b8d34daac2bdf7b1ad17d81ebdea 51 Pfam PF08970 Sporulation inhibitor A 6 48 1.4E-18 T 14-10-2018 IPR015064 Sporulation inhibitor A MC28_3629 23c4b8d34daac2bdf7b1ad17d81ebdea 51 SUPERFAMILY SSF100985 6 49 4.05E-16 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily MC28_0081 0aeac92eb9efc720219041ca5b029289 87 PIRSF PIRSF010606 1 87 7.7E-43 T 14-10-2018 IPR016571 Spore coat assembly protein CotJB MC28_0081 0aeac92eb9efc720219041ca5b029289 87 Pfam PF12652 CotJB protein 11 86 5.5E-29 T 14-10-2018 IPR024207 Spore coat assembly protein CotJB, domain MC28_0085 ae9240826890536ab6f98bee55f9fb3f 110 SUPERFAMILY SSF100939 2 100 5.89E-7 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily MC28_G377 31fb8d5861311b445de31beba0966c7d 140 Gene3D G3DSA:3.30.160.250 2 98 2.0E-17 T 14-10-2018 MC28_G377 31fb8d5861311b445de31beba0966c7d 140 SUPERFAMILY SSF143100 3 68 1.31E-9 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like MC28_G377 31fb8d5861311b445de31beba0966c7d 140 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 18 124 2.3E-8 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system MC28_3615 4484840451979ce20427cfca9f863e42 44 Pfam PF14141 YqzM-like protein 2 43 1.7E-25 T 14-10-2018 IPR025416 YqzM-like protein MC28_0439 4597cea2e196f6223d0b1afb8ca3de9d 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 176 4.4E-68 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MC28_0439 4597cea2e196f6223d0b1afb8ca3de9d 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 176 9.1E-66 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MC28_0439 4597cea2e196f6223d0b1afb8ca3de9d 181 Gene3D G3DSA:2.60.120.10 1 181 3.3E-70 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_0439 4597cea2e196f6223d0b1afb8ca3de9d 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 8.0E-96 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MC28_0439 4597cea2e196f6223d0b1afb8ca3de9d 181 SUPERFAMILY SSF51182 1 179 2.27E-70 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_3098 506f9239bee461a9d2b8edd7830c2c3f 569 Pfam PF05670 Domain of unknown function (DUF814) 455 538 3.6E-28 T 14-10-2018 IPR008532 Domain of unknown function DUF814 MC28_3098 506f9239bee461a9d2b8edd7830c2c3f 569 Gene3D G3DSA:2.30.310.10 1 167 2.3E-67 T 14-10-2018 MC28_3098 506f9239bee461a9d2b8edd7830c2c3f 569 Gene3D G3DSA:3.40.970.40 244 290 4.8E-18 T 14-10-2018 MC28_3098 506f9239bee461a9d2b8edd7830c2c3f 569 Gene3D G3DSA:1.10.8.50 168 235 4.8E-25 T 14-10-2018 MC28_3098 506f9239bee461a9d2b8edd7830c2c3f 569 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 444 1.6E-162 T 14-10-2018 MC28_1317 66b6f213c5b736c6f617b6fda32d05ad 141 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 2 125 1.1E-48 T 14-10-2018 IPR014229 Sporulation protein YtfJ MC28_1317 66b6f213c5b736c6f617b6fda32d05ad 141 PIRSF PIRSF021377 1 140 4.3E-53 T 14-10-2018 IPR014229 Sporulation protein YtfJ MC28_1317 66b6f213c5b736c6f617b6fda32d05ad 141 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 30 116 1.4E-26 T 14-10-2018 IPR014229 Sporulation protein YtfJ MC28_0118 da76a87820f4fb2d8b2f13925d945fd2 182 Pfam PF02525 Flavodoxin-like fold 2 177 2.6E-37 T 14-10-2018 IPR003680 Flavodoxin-like fold MC28_0118 da76a87820f4fb2d8b2f13925d945fd2 182 Gene3D G3DSA:3.40.50.360 1 181 6.9E-56 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_0118 da76a87820f4fb2d8b2f13925d945fd2 182 SUPERFAMILY SSF52218 1 180 1.24E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_4025 dd0b18436a21a5eb5cb83c997c12c661 610 Pfam PF02687 FtsX-like permease family 78 173 1.8E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_4025 dd0b18436a21a5eb5cb83c997c12c661 610 PIRSF PIRSF018968 1 369 2.1E-39 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_4025 dd0b18436a21a5eb5cb83c997c12c661 610 PIRSF PIRSF018968 394 608 2.6E-19 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_D015 30bd57f2a769a3a60e45f6d5ff56fb67 99 Pfam PF04956 TrbC/VIRB2 family 23 91 2.0E-13 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 MC28_0868 2f299733988b823ce9fae6d1fb5af6d4 155 Gene3D G3DSA:3.10.180.10 1 132 5.1E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0868 2f299733988b823ce9fae6d1fb5af6d4 155 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 124 8.0E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_0868 2f299733988b823ce9fae6d1fb5af6d4 155 SUPERFAMILY SSF54593 1 129 5.09E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_F147 899c5227e13b250b9b86714480de995a 79 ProDom PD275078 PLASMID PXO2-72/BXB0098/GBAA_PXO2_0098 1 58 1.0E-22 T 14-10-2018 IPR020250 Uncharacterised protein family, plasmid pXO2-72 MC28_F147 899c5227e13b250b9b86714480de995a 79 Pfam PF17443 Uncharacterized protein pXO2-72 1 61 2.8E-37 T 14-10-2018 IPR020250 Uncharacterised protein family, plasmid pXO2-72 MC28_4470 aa1c3bbf8bb39f529f730aa0cb2b2979 403 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 401 3.4E-138 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 MC28_4470 aa1c3bbf8bb39f529f730aa0cb2b2979 403 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 196 401 6.9E-71 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 MC28_4470 aa1c3bbf8bb39f529f730aa0cb2b2979 403 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 81 4.2E-22 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 MC28_1415 a493890d13e22d6db5c291f43fc03835 211 SUPERFAMILY SSF52218 1 211 3.42E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_1415 a493890d13e22d6db5c291f43fc03835 211 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 211 29.695 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 MC28_1415 a493890d13e22d6db5c291f43fc03835 211 Gene3D G3DSA:3.40.50.360 1 211 4.3E-65 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_1415 a493890d13e22d6db5c291f43fc03835 211 Pfam PF02525 Flavodoxin-like fold 2 206 1.7E-46 T 14-10-2018 IPR003680 Flavodoxin-like fold MC28_4720 497e9c4a1564a7769e7dd6a69b2e8e50 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.359 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4720 497e9c4a1564a7769e7dd6a69b2e8e50 44 Pfam PF00468 Ribosomal protein L34 1 44 2.8E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4720 497e9c4a1564a7769e7dd6a69b2e8e50 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 3.0E-16 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_4720 497e9c4a1564a7769e7dd6a69b2e8e50 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MC28_4720 497e9c4a1564a7769e7dd6a69b2e8e50 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 8.4E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 MC28_E141 0743988f71a0147c4bf2fab752cc8b9c 497 SUPERFAMILY SSF53098 28 494 1.67E-74 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_E141 0743988f71a0147c4bf2fab752cc8b9c 497 Pfam PF01609 Transposase DDE domain 139 404 1.7E-41 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_2004 b9e3b421bfdde58a189f6217a7da59e1 126 Gene3D G3DSA:3.10.490.10 2 124 8.4E-33 T 14-10-2018 MC28_2004 b9e3b421bfdde58a189f6217a7da59e1 126 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 121 2.2E-26 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like MC28_2004 b9e3b421bfdde58a189f6217a7da59e1 126 SUPERFAMILY SSF110857 1 123 3.14E-33 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily MC28_1525 46141c560b03d0f43b6b824dbde5b752 135 Gene3D G3DSA:2.60.40.2080 44 134 9.0E-7 T 14-10-2018 IPR037221 H-type lectin domain superfamily MC28_1525 46141c560b03d0f43b6b824dbde5b752 135 Pfam PF09458 H-type lectin domain 70 132 2.0E-7 T 14-10-2018 IPR019019 H-type lectin domain GO:0007155|GO:0030246 MC28_1525 46141c560b03d0f43b6b824dbde5b752 135 SUPERFAMILY SSF141086 64 132 3.79E-8 T 14-10-2018 IPR037221 H-type lectin domain superfamily MC28_2658 c0b4c08e85f58ee7b23a5db6a9e10554 62 TIGRFAM TIGR04429 Phr_nterm: Phr family secreted Rap phosphatase inhibitor 2 29 1.8E-9 T 14-10-2018 IPR030968 Phr family, secreted RapG/RapK phosphatase inhibitor MC28_F183 8e0ecb287d0d09a42063721e65310e10 316 Pfam PF00698 Acyl transferase domain 3 285 4.9E-31 T 14-10-2018 IPR014043 Acyl transferase MC28_F183 8e0ecb287d0d09a42063721e65310e10 316 SUPERFAMILY SSF55048 125 191 8.89E-7 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding MC28_F183 8e0ecb287d0d09a42063721e65310e10 316 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 296 6.6E-23 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain MC28_F183 8e0ecb287d0d09a42063721e65310e10 316 SUPERFAMILY SSF52151 1 298 9.16E-60 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MC28_F183 8e0ecb287d0d09a42063721e65310e10 316 Gene3D G3DSA:3.40.366.10 4 279 3.9E-76 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 MC28_F183 8e0ecb287d0d09a42063721e65310e10 316 Gene3D G3DSA:3.30.70.250 123 191 3.9E-76 T 14-10-2018 MC28_F183 8e0ecb287d0d09a42063721e65310e10 316 PIRSF PIRSF000446 1 306 7.6E-70 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 MC28_0511 08952a2677c7e7d62f0f40dcb222d939 44 Pfam PF08671 Anti-repressor SinI 9 36 8.4E-11 T 14-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 MC28_0511 08952a2677c7e7d62f0f40dcb222d939 44 SUPERFAMILY SSF47406 8 35 4.32E-7 T 14-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 MC28_2387 cfbdf0d8bf5bd23cd55b8407794f2cc5 131 Pfam PF11528 Protein of unknown function (DUF3224) 4 123 2.0E-20 T 14-10-2018 IPR021607 Protein of unknown function DUF3224 MC28_2387 cfbdf0d8bf5bd23cd55b8407794f2cc5 131 SUPERFAMILY SSF159238 2 130 2.88E-31 T 14-10-2018 IPR023159 SO1590-like superfamily MC28_2387 cfbdf0d8bf5bd23cd55b8407794f2cc5 131 Gene3D G3DSA:2.40.350.10 1 128 8.3E-23 T 14-10-2018 IPR023159 SO1590-like superfamily MC28_4606 0b86fdf137a23b4022343de0dd979311 141 SMART SM00422 8 78 7.7E-31 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_4606 0b86fdf137a23b4022343de0dd979311 141 Gene3D G3DSA:1.10.1660.10 5 134 9.9E-32 T 14-10-2018 MC28_4606 0b86fdf137a23b4022343de0dd979311 141 SUPERFAMILY SSF46955 7 127 3.48E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_4606 0b86fdf137a23b4022343de0dd979311 141 Pfam PF13411 MerR HTH family regulatory protein 8 76 3.8E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_3221 3a0e80d6d3b88cd4a5776f9b56740338 148 Pfam PF14071 Putative coat protein 13 148 1.6E-43 T 14-10-2018 IPR025953 Putative coat protein YlbD MC28_0957 f4417c46fb7c8b37b392efa7a4e4f1df 288 Pfam PF03773 Predicted permease 5 283 2.6E-69 T 14-10-2018 IPR005524 Predicted permease DUF318 MC28_1784 10bf54314ed6cf8470d461e96788d9b9 285 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 220 9.3E-18 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_1784 10bf54314ed6cf8470d461e96788d9b9 285 Gene3D G3DSA:3.40.50.720 1 285 4.2E-48 T 14-10-2018 MC28_1784 10bf54314ed6cf8470d461e96788d9b9 285 SUPERFAMILY SSF51735 1 283 6.63E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_3223 ef32f6eaafb6b578e9ef9c97038d2170 121 SUPERFAMILY SSF160755 1 114 7.45E-39 T 14-10-2018 IPR036491 YugN-like superfamily MC28_3223 ef32f6eaafb6b578e9ef9c97038d2170 121 Pfam PF08868 YugN-like family 6 93 6.3E-14 T 14-10-2018 IPR014967 Uncharacterised protein family, YugN-like MC28_3223 ef32f6eaafb6b578e9ef9c97038d2170 121 Gene3D G3DSA:3.30.310.100 1 121 1.7E-46 T 14-10-2018 IPR036491 YugN-like superfamily MC28_0206 1f164cd27c8eda226cfbd1629ee85fa0 104 Pfam PF03899 ATP synthase I chain 1 84 3.8E-11 T 14-10-2018 IPR005598 ATP synthase protein I MC28_0206 1f164cd27c8eda226cfbd1629ee85fa0 104 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 2 104 4.0E-51 T 14-10-2018 MC28_2046 8d7c0a727a1e8de4a4cafa7464178e9b 186 SUPERFAMILY SSF52540 2 184 3.27E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_2046 8d7c0a727a1e8de4a4cafa7464178e9b 186 Pfam PF13238 AAA domain 4 145 6.7E-13 T 14-10-2018 MC28_2046 8d7c0a727a1e8de4a4cafa7464178e9b 186 Gene3D G3DSA:3.40.50.300 2 185 1.8E-16 T 14-10-2018 MC28_2583 9c8e74634f8e600addf0a4cc8746645e 249 PIRSF PIRSF006648 1 249 3.3E-67 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 MC28_2583 9c8e74634f8e600addf0a4cc8746645e 249 Pfam PF01061 ABC-2 type transporter 5 214 2.3E-24 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 MC28_2328 c69e0d4b09ff55a286be809030c044b4 350 PIRSF PIRSF005508 1 350 1.2E-141 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 MC28_2328 c69e0d4b09ff55a286be809030c044b4 350 Gene3D G3DSA:1.20.1530.20 1 343 8.1E-28 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily MC28_2328 c69e0d4b09ff55a286be809030c044b4 350 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 8 337 4.9E-143 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 MC28_2328 c69e0d4b09ff55a286be809030c044b4 350 Pfam PF01758 Sodium Bile acid symporter family 53 249 1.8E-67 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 MC28_0129 8ff87c40f937326d16e9be3aa335047e 586 SUPERFAMILY SSF52540 329 573 3.37E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0129 8ff87c40f937326d16e9be3aa335047e 586 Pfam PF00005 ABC transporter 354 501 1.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MC28_0129 8ff87c40f937326d16e9be3aa335047e 586 SUPERFAMILY SSF90123 8 325 3.4E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_0129 8ff87c40f937326d16e9be3aa335047e 586 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MC28_0129 8ff87c40f937326d16e9be3aa335047e 586 Pfam PF00664 ABC transporter transmembrane region 21 292 1.9E-41 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 MC28_0129 8ff87c40f937326d16e9be3aa335047e 586 Gene3D G3DSA:1.20.1560.10 3 320 4.5E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 MC28_0129 8ff87c40f937326d16e9be3aa335047e 586 Gene3D G3DSA:3.40.50.300 329 584 1.5E-82 T 14-10-2018 MC28_0129 8ff87c40f937326d16e9be3aa335047e 586 SMART SM00382 363 564 5.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain MC28_4407 32d4427210c0fa3c5dbe56481ba9672f 340 Pfam PF03601 Conserved hypothetical protein 698 17 318 3.7E-84 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 MC28_2493 c651fe26d253faf48a623009d25bf8cb 182 SUPERFAMILY SSF160904 1 173 1.31E-28 T 14-10-2018 MC28_2493 c651fe26d253faf48a623009d25bf8cb 182 Pfam PF11706 CGNR zinc finger 127 174 5.0E-19 T 14-10-2018 IPR021005 Zinc finger, CGNR MC28_2493 c651fe26d253faf48a623009d25bf8cb 182 Gene3D G3DSA:1.10.3300.10 16 175 1.0E-11 T 14-10-2018 IPR023286 ABATE domain superfamily MC28_0100 c51dae25619d13a55ea2b373a959fc9a 353 Gene3D G3DSA:3.20.20.70 1 236 6.7E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0100 c51dae25619d13a55ea2b373a959fc9a 353 SUPERFAMILY SSF51445 1 234 1.35E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_0100 c51dae25619d13a55ea2b373a959fc9a 353 SUPERFAMILY SSF50891 242 350 3.22E-32 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_0100 c51dae25619d13a55ea2b373a959fc9a 353 Gene3D G3DSA:2.40.100.10 243 352 1.8E-38 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily MC28_0100 c51dae25619d13a55ea2b373a959fc9a 353 Pfam PF05913 Bacterial protein of unknown function (DUF871) 1 349 1.2E-121 T 14-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic MC28_3234 456b0af5d2921c4b9583d2e629339959 392 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 325 349 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3234 456b0af5d2921c4b9583d2e629339959 392 Pfam PF01098 Cell cycle protein 13 368 5.4E-105 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_2398 5e38d71089f17120cbaeb9ef66b90b3f 251 Gene3D G3DSA:1.10.10.630 172 243 6.5E-13 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_2398 5e38d71089f17120cbaeb9ef66b90b3f 251 Pfam PF07261 Replication initiation and membrane attachment 176 235 1.8E-10 T 14-10-2018 IPR006343 DnaD domain MC28_2398 5e38d71089f17120cbaeb9ef66b90b3f 251 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 176 235 9.7E-17 T 14-10-2018 IPR006343 DnaD domain MC28_2398 5e38d71089f17120cbaeb9ef66b90b3f 251 SUPERFAMILY SSF158499 175 235 2.35E-15 T 14-10-2018 IPR034829 DnaD-like domain superfamily MC28_4365 4b9fd75d3912461da0af3e74826be856 124 Pfam PF03788 LrgA family 21 112 4.7E-23 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 MC28_3664 a6b1a5daaaa2ffc08bb8a926827ffa00 307 SUPERFAMILY SSF53686 2 305 1.7E-90 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MC28_3664 a6b1a5daaaa2ffc08bb8a926827ffa00 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 MC28_3664 a6b1a5daaaa2ffc08bb8a926827ffa00 307 Gene3D G3DSA:3.40.50.1100 45 146 5.2E-113 T 14-10-2018 MC28_3664 a6b1a5daaaa2ffc08bb8a926827ffa00 307 Gene3D G3DSA:3.40.50.1100 9 299 5.2E-113 T 14-10-2018 MC28_3664 a6b1a5daaaa2ffc08bb8a926827ffa00 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 292 1.2E-62 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme MC28_D009 cd4d6cf2470dcb619117b93ed3cb8ecb 449 Pfam PF00437 Type II/IV secretion system protein 101 353 2.9E-33 T 14-10-2018 IPR001482 Type II/IV secretion system protein MC28_D009 cd4d6cf2470dcb619117b93ed3cb8ecb 449 Gene3D G3DSA:3.30.450.380 4 187 6.4E-14 T 14-10-2018 MC28_D009 cd4d6cf2470dcb619117b93ed3cb8ecb 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 221 234 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MC28_D009 cd4d6cf2470dcb619117b93ed3cb8ecb 449 Gene3D G3DSA:3.40.50.300 195 388 5.9E-38 T 14-10-2018 MC28_D009 cd4d6cf2470dcb619117b93ed3cb8ecb 449 SUPERFAMILY SSF52540 75 339 9.38E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_1082 b2090b087b4b48c6e46023680028c9ce 232 Pfam PF07423 Protein of unknown function (DUF1510) 5 230 2.2E-60 T 14-10-2018 IPR009988 Protein of unknown function DUF1510 MC28_1683 0c041f55f0eb87a2531b263f5648bfb6 260 Gene3D G3DSA:3.40.50.150 50 257 9.8E-25 T 14-10-2018 MC28_1683 0c041f55f0eb87a2531b263f5648bfb6 260 Pfam PF08241 Methyltransferase domain 63 158 1.2E-16 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_1683 0c041f55f0eb87a2531b263f5648bfb6 260 SUPERFAMILY SSF53335 57 251 7.58E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_3611 346cac949f1c4bd434ac479f684ed198 96 Pfam PF12438 Protein of unknown function (DUF3679) 1 45 2.2E-16 T 14-10-2018 IPR020534 Uncharacterised protein family YqxA MC28_3611 346cac949f1c4bd434ac479f684ed198 96 ProDom PD072942 YQXA ORF79 1 73 9.0E-31 T 14-10-2018 IPR020534 Uncharacterised protein family YqxA MC28_4549 7c45a35226f73c5d263cb3ce065d4c5a 131 Pfam PF03899 ATP synthase I chain 12 110 5.7E-15 T 14-10-2018 IPR005598 ATP synthase protein I MC28_4549 7c45a35226f73c5d263cb3ce065d4c5a 131 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 24 131 1.0E-47 T 14-10-2018 MC28_1932 d5a3ac10680fcff50f3ebb03bdb487ed 171 Gene3D G3DSA:1.20.120.450 2 165 1.6E-34 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_1932 d5a3ac10680fcff50f3ebb03bdb487ed 171 Pfam PF12867 DinB superfamily 9 160 9.1E-17 T 14-10-2018 IPR024775 DinB-like domain MC28_1932 d5a3ac10680fcff50f3ebb03bdb487ed 171 SUPERFAMILY SSF109854 7 166 3.97E-28 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_0493 d5bdc3bcda857e238259cf7bd6ac1860 384 Pfam PF12698 ABC-2 family transporter protein 3 353 5.6E-48 T 14-10-2018 MC28_0254 fc62ccd5ddb699cdf5a8a2ef10c29260 413 Pfam PF00149 Calcineurin-like phosphoesterase 5 203 4.8E-17 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 MC28_0254 fc62ccd5ddb699cdf5a8a2ef10c29260 413 PIRSF PIRSF033091 1 413 2.0E-161 T 14-10-2018 IPR014576 Predicted phosphoesterase, YhaO type MC28_0254 fc62ccd5ddb699cdf5a8a2ef10c29260 413 Gene3D G3DSA:3.60.21.10 2 254 2.6E-61 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like MC28_0254 fc62ccd5ddb699cdf5a8a2ef10c29260 413 SUPERFAMILY SSF56300 5 299 1.1E-57 T 14-10-2018 MC28_2031 16a334c43c3fa0817247ac45cc62de8b 244 Pfam PF08876 Domain of unknown function (DUF1836) 60 156 3.1E-16 T 14-10-2018 IPR014975 Protein of unknown function DUF1836 MC28_2619 0c2967b8b93f808567af2391fe9fc96b 75 Pfam PF01166 TSC-22/dip/bun family 9 41 1.5E-6 T 14-10-2018 IPR000580 TSC-22 / Dip / Bun GO:0003700|GO:0006355 MC28_2619 0c2967b8b93f808567af2391fe9fc96b 75 SUPERFAMILY SSF58026 9 40 3.4E-5 T 14-10-2018 MC28_G342 886a1a4be3b147e06e01e881fa673b78 453 Pfam PF04860 Phage portal protein 74 433 7.0E-29 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein MC28_G342 886a1a4be3b147e06e01e881fa673b78 453 PIRSF PIRSF019260 22 451 1.1E-56 T 14-10-2018 IPR016753 Phage portal protein PBSX family, Firmicutes MC28_4643 88735ea89cc5c42b86a08c3f7408c40d 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 208 28.871 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 MC28_4643 88735ea89cc5c42b86a08c3f7408c40d 208 Gene3D G3DSA:3.40.50.360 1 208 8.8E-60 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_4643 88735ea89cc5c42b86a08c3f7408c40d 208 Pfam PF02525 Flavodoxin-like fold 3 203 7.2E-41 T 14-10-2018 IPR003680 Flavodoxin-like fold MC28_4643 88735ea89cc5c42b86a08c3f7408c40d 208 SUPERFAMILY SSF52218 1 208 1.23E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily MC28_3858 61a568e74061e1e094f90ac3d50eebae 466 Pfam PF07261 Replication initiation and membrane attachment 326 391 2.4E-9 T 14-10-2018 IPR006343 DnaD domain MC28_G337 4ccda292278d16a2ee808257816ff217 58 Pfam PF13076 Fur-regulated basic protein A 1 35 5.3E-9 T 14-10-2018 IPR025072 Fur-regulated basic protein A MC28_1990 68aba0013b4322d0507149551d323af7 307 SUPERFAMILY SSF56112 18 301 2.8E-48 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily MC28_1990 68aba0013b4322d0507149551d323af7 307 Gene3D G3DSA:3.30.200.20 5 90 1.2E-13 T 14-10-2018 MC28_1990 68aba0013b4322d0507149551d323af7 307 Pfam PF01636 Phosphotransferase enzyme family 45 221 6.1E-20 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase MC28_1990 68aba0013b4322d0507149551d323af7 307 Gene3D G3DSA:3.90.1200.10 100 285 2.2E-19 T 14-10-2018 MC28_5017 bd830d0a4d6472b218a365583e9d823e 125 Pfam PF11127 Protein of unknown function (DUF2892) 1 60 4.7E-11 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 MC28_5182 4e6c30de0d3dd6cbe81f235f1fd19f8a 393 Pfam PF01381 Helix-turn-helix 7 48 2.4E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_5182 4e6c30de0d3dd6cbe81f235f1fd19f8a 393 Gene3D G3DSA:1.10.260.40 2 145 6.8E-13 T 14-10-2018 MC28_5182 4e6c30de0d3dd6cbe81f235f1fd19f8a 393 Pfam PF06114 IrrE N-terminal-like domain 167 290 4.1E-19 T 14-10-2018 IPR010359 IrrE N-terminal-like domain MC28_5182 4e6c30de0d3dd6cbe81f235f1fd19f8a 393 SUPERFAMILY SSF47413 1 68 3.22E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_5182 4e6c30de0d3dd6cbe81f235f1fd19f8a 393 SMART SM00530 6 61 3.4E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MC28_4459 b94ebd92e5fa2324cb550cafc31f9515 341 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 331 8.2E-37 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MC28_4977 57165906fb4ae3dd0d1164259ed1f531 237 Pfam PF08241 Methyltransferase domain 98 149 9.2E-14 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_4977 57165906fb4ae3dd0d1164259ed1f531 237 SUPERFAMILY SSF53335 100 180 8.86E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_4977 57165906fb4ae3dd0d1164259ed1f531 237 Gene3D G3DSA:3.40.50.150 89 229 7.7E-16 T 14-10-2018 MC28_C079 543752d2614ec4d05138bf203d0428b2 175 Pfam PF04862 Protein of unknown function (DUF642) 83 155 2.8E-5 T 14-10-2018 IPR006946 Domain of unknown function DUF642 MC28_C079 543752d2614ec4d05138bf203d0428b2 175 Gene3D G3DSA:2.60.120.260 39 173 1.5E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_C079 543752d2614ec4d05138bf203d0428b2 175 SUPERFAMILY SSF49785 42 172 1.7E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_5392 c09d66a2ab6d4723c331ea39549e7f4a 313 SUPERFAMILY SSF53822 38 312 1.66E-91 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_5392 c09d66a2ab6d4723c331ea39549e7f4a 313 Gene3D G3DSA:3.40.50.2300 144 278 2.8E-92 T 14-10-2018 MC28_5392 c09d66a2ab6d4723c331ea39549e7f4a 313 Gene3D G3DSA:3.40.50.2300 49 297 2.8E-92 T 14-10-2018 MC28_5392 c09d66a2ab6d4723c331ea39549e7f4a 313 Pfam PF13407 Periplasmic binding protein domain 46 297 1.0E-66 T 14-10-2018 IPR025997 Periplasmic binding protein MC28_F285 571e6242b43f86ab990c233643066da6 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.8E-6 T 14-10-2018 MC28_F285 571e6242b43f86ab990c233643066da6 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.8E-6 T 14-10-2018 MC28_F285 571e6242b43f86ab990c233643066da6 409 Gene3D G3DSA:3.50.50.60 1 387 3.4E-67 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_F285 571e6242b43f86ab990c233643066da6 409 SUPERFAMILY SSF51905 5 350 7.11E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily MC28_F285 571e6242b43f86ab990c233643066da6 409 Pfam PF01494 FAD binding domain 5 249 2.0E-18 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 MC28_2903 383eee7f10bf9233c56526938c0976aa 335 Gene3D G3DSA:1.10.3470.10 5 333 9.0E-86 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_2903 383eee7f10bf9233c56526938c0976aa 335 Pfam PF01032 FecCD transport family 18 327 4.4E-83 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 MC28_2903 383eee7f10bf9233c56526938c0976aa 335 SUPERFAMILY SSF81345 7 327 2.22E-77 T 14-10-2018 IPR037294 ABC transporter, BtuC-like MC28_E043 8375cd5215112f79bd00cd9e1e19371b 200 Pfam PF13814 Replication-relaxation 72 157 1.1E-8 T 14-10-2018 IPR025855 Plasmid replication-relaxation MC28_3170 5d21a8f4ff06ed46cfd89f8b116bb041 393 SUPERFAMILY SSF56563 132 389 4.84E-30 T 14-10-2018 MC28_3170 5d21a8f4ff06ed46cfd89f8b116bb041 393 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 22 388 5.1E-28 T 14-10-2018 IPR024455 Phage capsid MC28_3170 5d21a8f4ff06ed46cfd89f8b116bb041 393 Pfam PF05065 Phage capsid family 139 387 1.1E-14 T 14-10-2018 IPR024455 Phage capsid MC28_2460 8cb16fe0b5213e75b980ec2c3bbdfeda 126 SUPERFAMILY SSF46785 15 120 1.66E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_2460 8cb16fe0b5213e75b980ec2c3bbdfeda 126 Gene3D G3DSA:1.10.10.10 4 126 1.0E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2460 8cb16fe0b5213e75b980ec2c3bbdfeda 126 Pfam PF01638 HxlR-like helix-turn-helix 27 115 1.7E-38 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type MC28_E089 3bd7d99e32e32bd028f87162ae6abbb5 87 SUPERFAMILY SSF53098 4 85 2.5E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_5110 094fa0329127b72b586619125d8afb3e 49 Pfam PF09350 Domain of unknown function (DUF1992) 7 49 1.8E-9 T 14-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain MC28_3462 755b7b5c889ef2f7979f6c1eaf628276 441 SUPERFAMILY SSF53448 51 313 4.22E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_3462 755b7b5c889ef2f7979f6c1eaf628276 441 Pfam PF13641 Glycosyltransferase like family 2 54 284 6.1E-26 T 14-10-2018 MC28_3462 755b7b5c889ef2f7979f6c1eaf628276 441 Gene3D G3DSA:3.90.550.10 41 279 6.4E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_3273 45e574f09207213c61e38f94cb9e01f4 63 ProDom PD054279 YKZF 7 58 3.0E-8 T 14-10-2018 MC28_3273 45e574f09207213c61e38f94cb9e01f4 63 Pfam PF14156 Antirepressor AbbA 1 61 1.4E-29 T 14-10-2018 IPR025446 Antirepressor AbbA MC28_0109 a4075e807463148e639690b81218f48e 127 SMART SM00422 10 78 1.0E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0109 a4075e807463148e639690b81218f48e 127 SUPERFAMILY SSF46955 10 120 7.69E-30 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily MC28_0109 a4075e807463148e639690b81218f48e 127 Gene3D G3DSA:1.10.1660.10 8 126 4.7E-31 T 14-10-2018 MC28_0109 a4075e807463148e639690b81218f48e 127 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0109 a4075e807463148e639690b81218f48e 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 3.5E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0109 a4075e807463148e639690b81218f48e 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 3.5E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0109 a4075e807463148e639690b81218f48e 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 3.5E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_0109 a4075e807463148e639690b81218f48e 127 Pfam PF13411 MerR HTH family regulatory protein 10 75 7.3E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_5078 1870be0e904622778d901ce1595946a3 260 Pfam PF10127 Predicted nucleotidyltransferase 1 248 1.8E-97 T 14-10-2018 IPR018775 Nucleotidyltransferase, predicted MC28_2423 adeb361b9b0407663b9bcc38cb1ddfdd 396 Pfam PF07690 Major Facilitator Superfamily 212 385 1.3E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_2423 adeb361b9b0407663b9bcc38cb1ddfdd 396 Gene3D G3DSA:1.20.1250.20 195 394 9.0E-24 T 14-10-2018 MC28_2423 adeb361b9b0407663b9bcc38cb1ddfdd 396 Gene3D G3DSA:1.20.1250.20 2 194 2.1E-24 T 14-10-2018 MC28_2423 adeb361b9b0407663b9bcc38cb1ddfdd 396 SUPERFAMILY SSF103473 3 382 2.88E-52 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_5042 d7b4f0981abeb7f2f115ebcdc4a62105 107 SUPERFAMILY SSF103481 6 105 4.84E-18 T 14-10-2018 MC28_5042 d7b4f0981abeb7f2f115ebcdc4a62105 107 Pfam PF00893 Small Multidrug Resistance protein 3 92 6.1E-25 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 MC28_5042 d7b4f0981abeb7f2f115ebcdc4a62105 107 Gene3D G3DSA:1.10.3730.20 1 107 5.1E-33 T 14-10-2018 MC28_0049 8153c40a009ee6dd60664e77fcd831da 87 Pfam PF02583 Metal-sensitive transcriptional repressor 4 84 1.4E-25 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 MC28_0049 8153c40a009ee6dd60664e77fcd831da 87 Gene3D G3DSA:1.20.58.1000 2 86 6.2E-24 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily MC28_0901 2f078060f714c6379c632200e61418f1 161 SUPERFAMILY SSF48029 66 156 8.76E-5 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical MC28_2284 15a4d8e718e474c2e5b0f0392ffd7af7 171 Gene3D G3DSA:3.40.630.30 2 169 2.9E-40 T 14-10-2018 MC28_2284 15a4d8e718e474c2e5b0f0392ffd7af7 171 Pfam PF13673 Acetyltransferase (GNAT) domain 58 158 2.3E-9 T 14-10-2018 IPR000182 GNAT domain MC28_2284 15a4d8e718e474c2e5b0f0392ffd7af7 171 SUPERFAMILY SSF55729 8 159 1.59E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_0865 42bfc1729a11350b355a9d9e7c8b88ad 203 Pfam PF14470 Bacterial PH domain 84 159 4.4E-6 T 14-10-2018 IPR039519 YokE-like, PH domain MC28_3844 e77c81d6f47c574c2c7eeea9c88b5837 185 Pfam PF01966 HD domain 26 135 1.4E-11 T 14-10-2018 IPR006674 HD domain MC28_3844 e77c81d6f47c574c2c7eeea9c88b5837 185 SUPERFAMILY SSF109604 18 137 3.14E-18 T 14-10-2018 MC28_3844 e77c81d6f47c574c2c7eeea9c88b5837 185 Gene3D G3DSA:1.10.3210.10 4 182 6.3E-15 T 14-10-2018 MC28_3844 e77c81d6f47c574c2c7eeea9c88b5837 185 SMART SM00471 19 148 0.0025 T 14-10-2018 IPR003607 HD/PDEase domain MC28_5209 d1176d97cf2570849b6137ad51152436 77 Pfam PF10779 Haemolysin XhlA 9 71 2.8E-9 T 14-10-2018 IPR019715 Haemolysin XhlA MC28_1169 1f1f2c424671e82c5712e5fb6eb88e2d 201 SUPERFAMILY SSF55811 3 158 7.86E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_1169 1f1f2c424671e82c5712e5fb6eb88e2d 201 Gene3D G3DSA:3.90.79.10 1 172 7.8E-32 T 14-10-2018 MC28_1169 1f1f2c424671e82c5712e5fb6eb88e2d 201 Pfam PF00293 NUDIX domain 30 145 3.5E-8 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_0047 6916a3f892c431cb564642c5a1b3c124 194 Pfam PF11579 Protein of unknown function (DUF3238) 1 192 1.9E-114 T 14-10-2018 IPR021631 Protein of unknown function DUF3238 MC28_3243 5a6aac32c5b697041cef673a1c26f5e0 64 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 6 61 1.0E-11 T 14-10-2018 IPR035211 Protein of unknown function DUF5325 MC28_3243 5a6aac32c5b697041cef673a1c26f5e0 64 Pfam PF17259 Family of unknown function (DUF5325) 6 62 2.5E-20 T 14-10-2018 IPR035211 Protein of unknown function DUF5325 MC28_4625 d9f96a43ad5bd1cc1593e569781e89ab 122 Pfam PF04241 Protein of unknown function (DUF423) 18 104 2.2E-32 T 14-10-2018 IPR006696 Protein of unknown function DUF423 MC28_3792 46293e82d3939466755796cbceae6bb5 259 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 110 237 7.3E-48 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 MC28_3792 46293e82d3939466755796cbceae6bb5 259 SUPERFAMILY SSF55166 95 246 1.12E-39 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_3792 46293e82d3939466755796cbceae6bb5 259 Gene3D G3DSA:3.30.1380.10 50 259 2.3E-78 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 MC28_1540 320510603704723834bbbf9f8c9be44f 77 Pfam PF13135 Protein of unknown function (DUF3947) 3 77 8.9E-38 T 14-10-2018 IPR025039 Protein of unknown function DUF3947 MC28_4583 6b1a5b866c1de8d52dd763e7717578c1 295 Pfam PF03851 UV-endonuclease UvdE 1 251 1.1E-109 T 14-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 MC28_4583 6b1a5b866c1de8d52dd763e7717578c1 295 SUPERFAMILY SSF51658 62 234 2.57E-16 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily MC28_4583 6b1a5b866c1de8d52dd763e7717578c1 295 Hamap MF_00606 UV DNA damage endonuclease [uvsE]. 1 281 37.992 T 14-10-2018 IPR023520 UV-endonuclease UvdE, bacterial GO:0004519|GO:0009411 MC28_4583 6b1a5b866c1de8d52dd763e7717578c1 295 Gene3D G3DSA:3.20.20.150 1 285 2.2E-88 T 14-10-2018 MC28_4583 6b1a5b866c1de8d52dd763e7717578c1 295 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 2 280 4.7E-89 T 14-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 MC28_2659 7a508496ab7d10e639972d6938358f6b 199 Pfam PF04299 Putative FMN-binding domain 1 158 5.8E-54 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type MC28_2659 7a508496ab7d10e639972d6938358f6b 199 PIRSF PIRSF010372 1 199 3.0E-64 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type MC28_2659 7a508496ab7d10e639972d6938358f6b 199 Gene3D G3DSA:2.30.110.10 1 199 2.2E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 MC28_2659 7a508496ab7d10e639972d6938358f6b 199 SUPERFAMILY SSF50475 11 180 6.78E-38 T 14-10-2018 MC28_0478 5324b234107994bd35741f907f4f3544 136 Pfam PF13048 Protein of unknown function (DUF3908) 4 126 6.4E-52 T 14-10-2018 IPR025020 Protein of unknown function DUF3908 MC28_4319 8eac9a21cdc39f8f0583c4e9ecbe5a29 394 Pfam PF04235 Protein of unknown function (DUF418) 229 381 3.1E-41 T 14-10-2018 IPR007349 Domain of unknown function DUF418 MC28_5438 990fb833185351550ab72d8e11a9aaf5 455 Pfam PF07670 Nucleoside recognition 298 423 5.2E-18 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 MC28_5438 990fb833185351550ab72d8e11a9aaf5 455 Pfam PF07670 Nucleoside recognition 128 217 3.9E-9 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 MC28_5438 990fb833185351550ab72d8e11a9aaf5 455 Pfam PF07664 Ferrous iron transport protein B C terminus 240 289 2.6E-14 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 MC28_4021 b156b21c140ad6a3c809e051e1b26865 407 Pfam PF00999 Sodium/hydrogen exchanger family 12 374 1.0E-59 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 MC28_4021 b156b21c140ad6a3c809e051e1b26865 407 Gene3D G3DSA:1.20.1530.20 2 384 4.1E-66 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily MC28_0354 b89f13f8b155f3d5e4ddeeda31ad0574 193 PIRSF PIRSF011560 4 192 2.4E-70 T 14-10-2018 IPR010461 Competence protein ComK GO:0030420 MC28_0354 b89f13f8b155f3d5e4ddeeda31ad0574 193 Pfam PF06338 ComK protein 10 159 3.4E-56 T 14-10-2018 IPR010461 Competence protein ComK GO:0030420 MC28_1044 abdde4d0226f77c4417e20076b16c881 147 SUPERFAMILY SSF55729 1 132 2.19E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1044 abdde4d0226f77c4417e20076b16c881 147 Gene3D G3DSA:3.40.630.30 1 138 1.9E-18 T 14-10-2018 MC28_1044 abdde4d0226f77c4417e20076b16c881 147 Pfam PF13673 Acetyltransferase (GNAT) domain 46 129 7.7E-16 T 14-10-2018 IPR000182 GNAT domain MC28_1026 56bb21f20c0bd9484a39b9e493945e9f 213 Pfam PF07299 Elongation factor G-binding protein, N-terminal 4 86 9.6E-27 T 14-10-2018 IPR010841 Elongation factor G-binding protein, N-terminal MC28_1026 56bb21f20c0bd9484a39b9e493945e9f 213 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 99 204 2.1E-9 T 14-10-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger MC28_1026 56bb21f20c0bd9484a39b9e493945e9f 213 Gene3D G3DSA:1.20.1280.250 1 84 3.2E-13 T 14-10-2018 IPR038344 EF-G binding protein, N-terminal domain superfamily MC28_1606 c4ac00cc6e8798a7c5b494d623a5e29f 156 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 137 4.8E-23 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ MC28_F003 54a9245f39371ef6debb7d0f85e748e7 839 Pfam PF06114 IrrE N-terminal-like domain 185 259 1.3E-8 T 14-10-2018 IPR010359 IrrE N-terminal-like domain MC28_D178 f4220a2007933823b1931bedb1561390 111 Pfam PF08863 YolD-like protein 19 111 4.2E-26 T 14-10-2018 IPR014962 YolD-like protein MC28_3641 d2818b20c8aef2abf9d670b006dfdfcd 166 Pfam PF07681 DoxX 16 115 2.0E-10 T 14-10-2018 IPR032808 DoxX family MC28_E161 e69e8c9e1ed5f9e7393397957c65bca0 188 Pfam PF00589 Phage integrase family 30 177 6.0E-19 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MC28_E161 e69e8c9e1ed5f9e7393397957c65bca0 188 SUPERFAMILY SSF56349 7 186 3.83E-30 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MC28_E161 e69e8c9e1ed5f9e7393397957c65bca0 188 Gene3D G3DSA:1.10.443.10 11 188 5.3E-26 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 MC28_4788 167236e1898ba94332b2861233bb37e2 171 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 MC28_4788 167236e1898ba94332b2861233bb37e2 171 SUPERFAMILY SSF55083 4 149 6.8E-53 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 MC28_4788 167236e1898ba94332b2861233bb37e2 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 133 1.4E-47 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 MC28_4788 167236e1898ba94332b2861233bb37e2 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 133 2.9E-39 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 MC28_4788 167236e1898ba94332b2861233bb37e2 171 Gene3D G3DSA:3.30.70.560 2 170 2.8E-57 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 MC28_2355 6352f66a06bb871456a1bb6c703ed343 132 Pfam PF07485 Domain of Unknown Function (DUF1259) 15 130 5.7E-30 T 14-10-2018 IPR011094 Uncharacterised protein family, LppY/LpqO MC28_0960 cd528db787d6cd5d580554e88bb6bc6c 467 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 457 1.9E-199 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 MC28_0960 cd528db787d6cd5d580554e88bb6bc6c 467 Pfam PF03553 Na+/H+ antiporter family 159 451 7.3E-67 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 MC28_0624 dcf72ecd7966ffe3732c522fb8fb80fe 139 SMART SM00347 29 128 3.1E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0624 dcf72ecd7966ffe3732c522fb8fb80fe 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0624 dcf72ecd7966ffe3732c522fb8fb80fe 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0624 dcf72ecd7966ffe3732c522fb8fb80fe 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0624 dcf72ecd7966ffe3732c522fb8fb80fe 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_0624 dcf72ecd7966ffe3732c522fb8fb80fe 139 SUPERFAMILY SSF46785 7 138 4.27E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_0624 dcf72ecd7966ffe3732c522fb8fb80fe 139 Gene3D G3DSA:1.10.10.10 1 139 9.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_0624 dcf72ecd7966ffe3732c522fb8fb80fe 139 Pfam PF01047 MarR family 36 93 8.4E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MC28_1399 9ecb5604557677af46a4dbe8c8954e4c 479 Pfam PF02447 GntP family permease 65 269 6.9E-8 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_1405 d9924cb5b800302440eaf29f0fb34fd1 143 Pfam PF00583 Acetyltransferase (GNAT) family 43 132 1.4E-13 T 14-10-2018 IPR000182 GNAT domain MC28_1405 d9924cb5b800302440eaf29f0fb34fd1 143 Gene3D G3DSA:3.40.630.30 2 143 9.7E-29 T 14-10-2018 MC28_1405 d9924cb5b800302440eaf29f0fb34fd1 143 SUPERFAMILY SSF55729 3 138 1.27E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_F155 23a2b96d41c362f773baf617a42c849d 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 105 3.0E-10 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain MC28_F155 23a2b96d41c362f773baf617a42c849d 190 SUPERFAMILY SSF51206 15 139 2.23E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like MC28_F155 23a2b96d41c362f773baf617a42c849d 190 Gene3D G3DSA:2.60.120.10 1 141 1.5E-34 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_4161 f28447f1f49cedba9203f3c71a5ebc46 331 Pfam PF13791 Sigma factor regulator C-terminal 183 325 3.3E-28 T 14-10-2018 IPR025672 Sigma factor regulator C-terminal domain MC28_4161 f28447f1f49cedba9203f3c71a5ebc46 331 Pfam PF13800 Sigma factor regulator N-terminal 22 109 1.2E-15 T 14-10-2018 IPR029101 Sigma factor regulator, N-terminal MC28_5423 146c656b05c7a755854dd6267d956693 85 Pfam PF13214 Protein of unknown function (DUF4022) 7 83 4.6E-48 T 14-10-2018 IPR025095 Protein of unknown function DUF4022 MC28_2859 393bbbdb0aff9cac29e9a2aab24ed361 356 Pfam PF00534 Glycosyl transferases group 1 172 289 1.2E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 MC28_2859 393bbbdb0aff9cac29e9a2aab24ed361 356 Gene3D G3DSA:3.40.50.2000 158 290 1.4E-48 T 14-10-2018 MC28_2859 393bbbdb0aff9cac29e9a2aab24ed361 356 Gene3D G3DSA:3.40.50.2000 4 157 1.4E-48 T 14-10-2018 MC28_2859 393bbbdb0aff9cac29e9a2aab24ed361 356 SUPERFAMILY SSF53756 3 351 2.69E-55 T 14-10-2018 MC28_2859 393bbbdb0aff9cac29e9a2aab24ed361 356 Pfam PF13439 Glycosyltransferase Family 4 4 162 2.9E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 MC28_0922 c5ab3d32a93fe3d0fd8b14bc795528cd 56 Pfam PF13131 Protein of unknown function (DUF3951) 1 50 2.5E-28 T 14-10-2018 IPR025028 Protein of unknown function DUF3951 MC28_5121 38f953e502febfe15ea178270d0ea761 471 PRINTS PR01228 Eggshell protein signature 120 130 3.4E-5 T 14-10-2018 MC28_5121 38f953e502febfe15ea178270d0ea761 471 PRINTS PR01228 Eggshell protein signature 95 110 3.4E-5 T 14-10-2018 MC28_5121 38f953e502febfe15ea178270d0ea761 471 PRINTS PR01228 Eggshell protein signature 151 169 3.4E-5 T 14-10-2018 MC28_5121 38f953e502febfe15ea178270d0ea761 471 PRINTS PR01228 Eggshell protein signature 8 24 3.4E-5 T 14-10-2018 MC28_F051 00da45c151b32ca154c2d96481b40665 246 Pfam PF14256 YwiC-like protein 10 135 5.6E-42 T 14-10-2018 IPR025576 YwiC-like protein MC28_2449 0efea180e0e3ba53818e4fac83bd3db4 265 Gene3D G3DSA:3.10.20.490 164 263 6.8E-12 T 14-10-2018 MC28_2449 0efea180e0e3ba53818e4fac83bd3db4 265 Pfam PF14478 Domain of unknown function (DUF4430) 192 262 8.1E-17 T 14-10-2018 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 MC28_2692 40555040433f356a193c11200f275f9f 131 Gene3D G3DSA:3.90.79.10 1 128 1.3E-22 T 14-10-2018 MC28_2692 40555040433f356a193c11200f275f9f 131 SUPERFAMILY SSF55811 6 130 1.9E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 MC28_2692 40555040433f356a193c11200f275f9f 131 PRINTS PR00502 NUDIX hydrolase family signature 43 58 2.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_2692 40555040433f356a193c11200f275f9f 131 PRINTS PR00502 NUDIX hydrolase family signature 29 43 2.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 MC28_2692 40555040433f356a193c11200f275f9f 131 Pfam PF00293 NUDIX domain 2 119 6.5E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 MC28_0007 9281b34125fa0a72eadc1101a997fa67 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 244 6.9E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_0007 9281b34125fa0a72eadc1101a997fa67 251 Gene3D G3DSA:1.10.3720.10 50 244 7.2E-25 T 14-10-2018 IPR035906 MetI-like superfamily MC28_0007 9281b34125fa0a72eadc1101a997fa67 251 SUPERFAMILY SSF161098 55 232 1.28E-28 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4976 0301f55e83f9efe28ddd3b816e1f5d4a 290 Gene3D G3DSA:3.40.50.150 46 241 6.3E-24 T 14-10-2018 MC28_4976 0301f55e83f9efe28ddd3b816e1f5d4a 290 Pfam PF08241 Methyltransferase domain 89 185 2.8E-13 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 MC28_4976 0301f55e83f9efe28ddd3b816e1f5d4a 290 SUPERFAMILY SSF53335 72 230 9.92E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_G331 8ef048efda8aff27f3fa89e5cb440d25 63 SUPERFAMILY SSF47413 2 59 9.48E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_G331 8ef048efda8aff27f3fa89e5cb440d25 63 Gene3D G3DSA:1.10.260.40 2 59 1.4E-8 T 14-10-2018 MC28_2279 46673b9428466e3d5c4debde67f14014 476 Pfam PF07670 Nucleoside recognition 170 263 4.1E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 MC28_D033 3350afc10acebb9cfbb7c27b12b33717 95 ProDom PD282039 PLASMID PXO2-04/BXB0002/GBAA_PXO2_0002 1 90 2.0E-41 T 14-10-2018 IPR020267 Uncharacterised protein family pXO2-04 MC28_1899 bad03dc68b52e3b6144738af2f438ddc 157 Gene3D G3DSA:3.40.630.30 1 144 1.0E-17 T 14-10-2018 MC28_1899 bad03dc68b52e3b6144738af2f438ddc 157 SUPERFAMILY SSF55729 1 143 4.18E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1899 bad03dc68b52e3b6144738af2f438ddc 157 Pfam PF00583 Acetyltransferase (GNAT) family 41 135 3.3E-8 T 14-10-2018 IPR000182 GNAT domain MC28_G102 8a86febfffa7930c864aece94731f190 53 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 1 50 5.1E-10 T 14-10-2018 IPR026834 LHH MC28_4003 7e193b7b9a1ffab697140992f525fe14 337 SUPERFAMILY SSF69572 3 329 7.85E-88 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 MC28_4003 7e193b7b9a1ffab697140992f525fe14 337 Pfam PF00899 ThiF family 5 240 5.0E-63 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MC28_4003 7e193b7b9a1ffab697140992f525fe14 337 Gene3D G3DSA:3.40.50.720 1 248 1.6E-75 T 14-10-2018 MC28_0777 30c6d8dec4507e18e2c891383c5375bd 56 PIRSF PIRSF036698 1 56 7.2E-38 T 14-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA MC28_0777 30c6d8dec4507e18e2c891383c5375bd 56 Pfam PF14084 Protein of unknown function (DUF4264) 4 56 6.3E-25 T 14-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA MC28_2068 6c518ab682462ecf77229d40a780226c 235 Pfam PF04519 Polymer-forming cytoskeletal 48 135 3.0E-6 T 14-10-2018 IPR007607 Bactofilin A/B MC28_1798 b27f813ede398e00efaeadc260266f92 329 SUPERFAMILY SSF51430 1 320 5.24E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_1798 b27f813ede398e00efaeadc260266f92 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 260 272 7.7E-8 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 MC28_1798 b27f813ede398e00efaeadc260266f92 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 273 286 7.7E-8 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 MC28_1798 b27f813ede398e00efaeadc260266f92 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 109 119 7.7E-8 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 MC28_1798 b27f813ede398e00efaeadc260266f92 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 203 209 7.7E-8 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 MC28_1798 b27f813ede398e00efaeadc260266f92 329 Gene3D G3DSA:3.20.20.100 1 326 4.1E-110 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily MC28_1798 b27f813ede398e00efaeadc260266f92 329 Pfam PF00248 Aldo/keto reductase family 15 316 1.3E-76 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain MC28_3820 f01816b0b408d40dbe4cfa0455db5c9a 64 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 2 63 7.5E-37 T 14-10-2018 IPR019240 Protein of unknown function DUF2196 MC28_3820 f01816b0b408d40dbe4cfa0455db5c9a 64 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 2 62 3.2E-34 T 14-10-2018 IPR019240 Protein of unknown function DUF2196 MC28_G024 6359b63e70ae58638c958c53d4b844b1 361 Pfam PF13255 Protein of unknown function (DUF4046) 41 111 1.4E-6 T 14-10-2018 IPR025119 Domain of unknown function DUF4046 MC28_2633 23ca57291cc2003903b47b6ec31a2a62 174 Pfam PF13527 Acetyltransferase (GNAT) domain 4 132 6.4E-12 T 14-10-2018 MC28_2633 23ca57291cc2003903b47b6ec31a2a62 174 SUPERFAMILY SSF55729 3 138 1.25E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2633 23ca57291cc2003903b47b6ec31a2a62 174 Gene3D G3DSA:3.40.630.30 1 174 1.3E-46 T 14-10-2018 MC28_1305 976e1467a23eafc2c4360160c64f5545 1306 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 1 192 3.4E-76 T 14-10-2018 IPR023838 Type VII secretion system EsaA GO:0016021 MC28_0451 e5b87b57b4a391e22bc3e0aba999526a 172 Pfam PF13563 2'-5' RNA ligase superfamily 13 153 8.7E-25 T 14-10-2018 MC28_0451 e5b87b57b4a391e22bc3e0aba999526a 172 Gene3D G3DSA:3.90.1140.10 2 171 3.5E-45 T 14-10-2018 MC28_0451 e5b87b57b4a391e22bc3e0aba999526a 172 Hamap MF_01444 Putative phosphoesterase . 1 168 39.436 T 14-10-2018 IPR022932 Putative phosphoesterase YjcG MC28_0451 e5b87b57b4a391e22bc3e0aba999526a 172 SUPERFAMILY SSF55144 1 170 8.55E-34 T 14-10-2018 IPR009097 Cyclic phosphodiesterase MC28_4498 40c2b8a400ca2aeda8083c59f0c3d37b 240 Pfam PF04991 LicD family 56 88 3.3E-6 T 14-10-2018 IPR007074 LicD family MC28_1076 1e41a00cc87ff42f962afeb5720f342f 328 SUPERFAMILY SSF110296 59 321 5.89E-31 T 14-10-2018 MC28_1076 1e41a00cc87ff42f962afeb5720f342f 328 Gene3D G3DSA:2.130.10.10 266 327 4.0E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_1076 1e41a00cc87ff42f962afeb5720f342f 328 Gene3D G3DSA:2.130.10.10 35 262 4.9E-15 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_1826 1bc0481b189fb11c8008f3d5fc6d14a7 138 Pfam PF13160 Protein of unknown function (DUF3995) 12 132 1.7E-35 T 14-10-2018 IPR025058 Protein of unknown function DUF3995 MC28_1215 d809ee33def7f3e4b3b63ee33a664b65 433 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 48 375 4.2E-67 T 14-10-2018 IPR006427 Phage portal protein, HK97 MC28_1215 d809ee33def7f3e4b3b63ee33a664b65 433 Gene3D G3DSA:2.40.500.30 63 317 4.8E-18 T 14-10-2018 MC28_1215 d809ee33def7f3e4b3b63ee33a664b65 433 Pfam PF04860 Phage portal protein 48 371 1.4E-71 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein MC28_1215 d809ee33def7f3e4b3b63ee33a664b65 433 Gene3D G3DSA:3.30.1120.70 205 256 4.8E-18 T 14-10-2018 MC28_1215 d809ee33def7f3e4b3b63ee33a664b65 433 Gene3D G3DSA:1.20.1270.210 44 310 4.8E-18 T 14-10-2018 MC28_4585 bd40f5d6e11ec96ac46ce2dceabce38f 48 Pfam PF05968 Bacillus PapR protein 1 48 1.8E-33 T 14-10-2018 IPR009239 Bacillus PapR MC28_F057 a72482ff5d09fd007eeb941a789daa2a 250 Gene3D G3DSA:3.90.70.10 53 249 3.4E-68 T 14-10-2018 MC28_F057 a72482ff5d09fd007eeb941a789daa2a 250 Pfam PF13529 Peptidase_C39 like family 57 218 1.2E-32 T 14-10-2018 IPR039564 Peptidase C39-like MC28_F057 a72482ff5d09fd007eeb941a789daa2a 250 PIRSF PIRSF032442 1 248 1.8E-82 T 14-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 MC28_5245 2a012757b7e67f71cec5831b16af2dc5 88 Pfam PF14043 WVELL protein 3 75 9.9E-36 T 14-10-2018 IPR026952 WVELL protein MC28_5250 77890559bfb5fc1ac506e62e5484e398 86 Pfam PF14182 YgaB-like protein 3 78 1.3E-31 T 14-10-2018 IPR025572 YgaB-like protein MC28_0227 2afd24228331f6751ed81797612191c2 364 Gene3D G3DSA:1.25.40.10 3 364 3.7E-92 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_0227 2afd24228331f6751ed81797612191c2 364 SMART SM00028 212 245 8.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0227 2afd24228331f6751ed81797612191c2 364 SMART SM00028 131 164 320.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0227 2afd24228331f6751ed81797612191c2 364 SMART SM00028 172 205 480.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0227 2afd24228331f6751ed81797612191c2 364 SMART SM00028 91 124 460.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0227 2afd24228331f6751ed81797612191c2 364 SMART SM00028 246 279 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_0227 2afd24228331f6751ed81797612191c2 364 SUPERFAMILY SSF48452 91 265 1.44E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_4556 fd436f019f867d04f8490fd7636eb25b 130 SUPERFAMILY SSF52788 1 126 1.05E-28 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily MC28_4556 fd436f019f867d04f8490fd7636eb25b 130 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 124 7.3E-22 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I MC28_4556 fd436f019f867d04f8490fd7636eb25b 130 SMART SM00226 1 126 2.0E-18 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I MC28_4556 fd436f019f867d04f8490fd7636eb25b 130 Gene3D G3DSA:3.40.50.2300 1 130 2.4E-35 T 14-10-2018 MC28_1700 d212f24c96e01e989f2aaf2f40f64fe1 252 Pfam PF01925 Sulfite exporter TauE/SafE 11 245 7.4E-44 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 MC28_1106 b484abf1aab69b19c3d932a5f298509e 388 Pfam PF00144 Beta-lactamase 63 382 2.2E-68 T 14-10-2018 IPR001466 Beta-lactamase-related MC28_1106 b484abf1aab69b19c3d932a5f298509e 388 Gene3D G3DSA:3.40.710.10 47 388 2.4E-144 T 14-10-2018 MC28_1106 b484abf1aab69b19c3d932a5f298509e 388 ProSitePatterns PS00146 Beta-lactamase class-A active site. 100 115 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 MC28_1106 b484abf1aab69b19c3d932a5f298509e 388 SUPERFAMILY SSF56601 52 372 1.32E-79 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_1623 fed7de174ecb941e6ddd04a804ed363e 135 SUPERFAMILY SSF55729 10 127 1.06E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1623 fed7de174ecb941e6ddd04a804ed363e 135 Gene3D G3DSA:3.40.630.30 7 132 5.2E-26 T 14-10-2018 MC28_1623 fed7de174ecb941e6ddd04a804ed363e 135 Pfam PF13673 Acetyltransferase (GNAT) domain 35 125 3.7E-13 T 14-10-2018 IPR000182 GNAT domain MC28_2836 6e71642b337c2079279efca9ce1f89a5 267 Pfam PF13349 Putative adhesin 125 265 6.5E-19 T 14-10-2018 IPR025164 Putative adhesin MC28_2767 dc1aef7a95efa95dc49d6b5ef7d8fa60 126 SUPERFAMILY SSF49764 30 120 2.62E-14 T 14-10-2018 IPR008978 HSP20-like chaperone MC28_2767 dc1aef7a95efa95dc49d6b5ef7d8fa60 126 Gene3D G3DSA:2.60.40.790 32 114 3.6E-11 T 14-10-2018 IPR008978 HSP20-like chaperone MC28_0507 2b61967b3d56f3cbbea9c6de0ef0c09c 195 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 13 44 4.6E-11 T 14-10-2018 IPR023833 Signal peptide, camelysin MC28_0507 2b61967b3d56f3cbbea9c6de0ef0c09c 195 Pfam PF12389 Camelysin metallo-endopeptidase 2 194 1.0E-87 T 14-10-2018 IPR022121 Peptidase M73, camelysin MC28_5030 795d06ac7d82213cc2c7d9e88933a9c6 63 Pfam PF13080 Protein of unknown function (DUF3926) 18 60 2.0E-23 T 14-10-2018 IPR025076 Protein of unknown function DUF3926 MC28_0605 223d3815a68de6beeb568c81ba004253 391 PIRSF PIRSF021438 1 391 7.0E-144 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes MC28_0605 223d3815a68de6beeb568c81ba004253 391 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 6 388 4.1E-133 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes MC28_0605 223d3815a68de6beeb568c81ba004253 391 SUPERFAMILY SSF52266 286 389 1.83E-11 T 14-10-2018 MC28_0605 223d3815a68de6beeb568c81ba004253 391 Gene3D G3DSA:3.40.50.1110 282 388 5.8E-6 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_0605 223d3815a68de6beeb568c81ba004253 391 Pfam PF04914 DltD protein 40 389 2.4E-125 T 14-10-2018 IPR006998 DltD MC28_0052 61f3222dc6ef495ce7c5f5349715d749 76 Pfam PF01206 Sulfurtransferase TusA 7 75 1.1E-24 T 14-10-2018 IPR001455 TusA-like domain MC28_0052 61f3222dc6ef495ce7c5f5349715d749 76 Gene3D G3DSA:3.30.110.40 1 76 2.6E-29 T 14-10-2018 IPR036868 TusA-like domain superfamily MC28_0052 61f3222dc6ef495ce7c5f5349715d749 76 SUPERFAMILY SSF64307 5 75 6.8E-26 T 14-10-2018 IPR036868 TusA-like domain superfamily MC28_4256 8c67a58ca5b30ea564013420b49ae10f 127 SUPERFAMILY SSF51230 3 125 2.36E-46 T 14-10-2018 IPR011053 Single hybrid motif MC28_4256 8c67a58ca5b30ea564013420b49ae10f 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 9.7E-58 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 MC28_4256 8c67a58ca5b30ea564013420b49ae10f 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 MC28_4256 8c67a58ca5b30ea564013420b49ae10f 127 Gene3D G3DSA:2.40.50.100 1 124 9.4E-53 T 14-10-2018 MC28_4256 8c67a58ca5b30ea564013420b49ae10f 127 Pfam PF01597 Glycine cleavage H-protein 7 126 2.1E-49 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate MC28_4256 8c67a58ca5b30ea564013420b49ae10f 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 40.698 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 MC28_1311 a653aff950030ba7fe22535fcd9c4d7f 529 Gene3D G3DSA:3.40.50.1820 41 266 2.1E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1311 a653aff950030ba7fe22535fcd9c4d7f 529 SUPERFAMILY SSF53474 66 267 3.84E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1311 a653aff950030ba7fe22535fcd9c4d7f 529 Pfam PF01764 Lipase (class 3) 91 213 3.5E-8 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 MC28_G389 7e58fcd3ed0deda4321bfe0fc657c4fc 367 Gene3D G3DSA:2.130.10.10 46 364 2.7E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 MC28_G389 7e58fcd3ed0deda4321bfe0fc657c4fc 367 SUPERFAMILY SSF69318 5 287 4.8E-55 T 14-10-2018 MC28_G389 7e58fcd3ed0deda4321bfe0fc657c4fc 367 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 13 72 2.9E-10 T 14-10-2018 MC28_G389 7e58fcd3ed0deda4321bfe0fc657c4fc 367 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 214 274 3.4E-11 T 14-10-2018 MC28_G389 7e58fcd3ed0deda4321bfe0fc657c4fc 367 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 111 173 2.8E-15 T 14-10-2018 MC28_5314 236b9b16256e58e20a1a0221f64c9c27 160 Pfam PF07849 Protein of unknown function (DUF1641) 121 155 2.4E-11 T 14-10-2018 IPR012440 Protein of unknown function DUF1641 MC28_E088 7d7490e327f42b68aa9c22e973e4b6d4 497 Pfam PF01609 Transposase DDE domain 139 405 1.4E-44 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_E088 7d7490e327f42b68aa9c22e973e4b6d4 497 SUPERFAMILY SSF53098 54 490 9.1E-78 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_2172 69ea1eaf9c6646c9015221dec3a1ecd3 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 78 2.7E-15 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain MC28_2172 69ea1eaf9c6646c9015221dec3a1ecd3 108 SUPERFAMILY SSF54909 1 99 1.61E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel MC28_2172 69ea1eaf9c6646c9015221dec3a1ecd3 108 Gene3D G3DSA:3.30.70.100 1 108 1.8E-48 T 14-10-2018 MC28_3450 809ee293b2532b6bfa0dbb7c4d2fdaa1 398 Pfam PF01098 Cell cycle protein 20 389 2.9E-86 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_3450 809ee293b2532b6bfa0dbb7c4d2fdaa1 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 348 372 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 MC28_0940 e0a195810f2c82308c9fc50a44ddc9dc 363 SUPERFAMILY SSF56601 9 351 4.48E-28 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like MC28_0940 e0a195810f2c82308c9fc50a44ddc9dc 363 Pfam PF13354 Beta-lactamase enzyme family 57 275 2.6E-17 T 14-10-2018 MC28_0940 e0a195810f2c82308c9fc50a44ddc9dc 363 Gene3D G3DSA:3.40.710.10 39 350 1.0E-37 T 14-10-2018 MC28_D194 bc685fd8b7626c96430214c312b19c17 100 ProDom PD284279 PLASMID PXO2-34/BXB0033/GBAA_PXO2_0033 1 100 4.0E-53 T 14-10-2018 IPR020270 Uncharacterised protein family, plasmid pXO2-34 MC28_D194 bc685fd8b7626c96430214c312b19c17 100 Pfam PF17362 Family of unknown function 16 94 1.8E-30 T 14-10-2018 IPR020270 Uncharacterised protein family, plasmid pXO2-34 MC28_F128 f1d54287d396a645fc4e8e1045781dd3 258 Gene3D G3DSA:2.30.30.40 161 233 7.5E-6 T 14-10-2018 MC28_1163 311a90fd83cc376aa8c8d3e57a872b33 197 Pfam PF11337 Protein of unknown function (DUF3139) 6 87 6.9E-15 T 14-10-2018 IPR021486 Protein of unknown function DUF3139 MC28_1441 b05a1cec63059ef2c6e5c408a5174efd 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 290 4.8E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_1441 b05a1cec63059ef2c6e5c408a5174efd 300 SUPERFAMILY SSF161098 79 275 1.11E-8 T 14-10-2018 IPR035906 MetI-like superfamily MC28_1441 b05a1cec63059ef2c6e5c408a5174efd 300 Gene3D G3DSA:1.10.3720.10 76 296 5.0E-8 T 14-10-2018 IPR035906 MetI-like superfamily MC28_4147 9ddc5bec7497c67e3ebd6f7a961e74c8 317 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 21 311 19.689 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 MC28_4147 9ddc5bec7497c67e3ebd6f7a961e74c8 317 Pfam PF01040 UbiA prenyltransferase family 38 271 2.8E-35 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 MC28_4147 9ddc5bec7497c67e3ebd6f7a961e74c8 317 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 30 308 3.4E-39 T 14-10-2018 MC28_4147 9ddc5bec7497c67e3ebd6f7a961e74c8 317 PIRSF PIRSF005355 14 316 3.7E-87 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 MC28_G066 658e65e47180c55450157560c421e8bc 135 Pfam PF07681 DoxX 9 88 6.1E-19 T 14-10-2018 IPR032808 DoxX family MC28_3892 4e81cdd24bfef4905184ec6abe5e657c 116 Pfam PF11518 Protein of unknown function (DUF3221) 12 114 3.3E-41 T 14-10-2018 IPR021598 Protein of unknown function DUF3221 MC28_3892 4e81cdd24bfef4905184ec6abe5e657c 116 Gene3D G3DSA:2.40.50.140 31 114 9.5E-8 T 14-10-2018 MC28_D107 8cecd660236f11b8786010d3afe494ec 124 ProDom PD293760 PLASMID MEMBRANE PXO2-27/BXB0026/GBAA_PXO2_0026 TRANSMEMBRANE 1 124 1.0E-50 T 14-10-2018 IPR020331 Uncharacterised protein family, plasmid pXO2-27 MC28_0318 68de1f5cd50dd65a1555efbbc105b93e 39 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 18 36 7.9E-10 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_0318 68de1f5cd50dd65a1555efbbc105b93e 39 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 20 38 7.8E-8 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_0709 6b907170e22c3aa027b90800ed8b3280 541 Pfam PF05140 ResB-like family 439 519 3.1E-16 T 14-10-2018 IPR007816 ResB-like domain MC28_0709 6b907170e22c3aa027b90800ed8b3280 541 Pfam PF05140 ResB-like family 65 430 1.4E-73 T 14-10-2018 IPR007816 ResB-like domain MC28_2110 b0479b12dd446929cb5afeb21329ee05 160 Pfam PF12688 Tetratrico peptide repeat 40 155 7.7E-14 T 14-10-2018 MC28_2110 b0479b12dd446929cb5afeb21329ee05 160 SUPERFAMILY SSF48452 35 133 6.9E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_2110 b0479b12dd446929cb5afeb21329ee05 160 SMART SM00028 37 72 85.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2110 b0479b12dd446929cb5afeb21329ee05 160 SMART SM00028 74 107 0.15 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 MC28_2110 b0479b12dd446929cb5afeb21329ee05 160 Gene3D G3DSA:1.25.40.10 48 153 3.2E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 MC28_5118 a029db14376320f5ae22f9f187aaa43c 437 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 9 380 5.6E-60 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 MC28_5118 a029db14376320f5ae22f9f187aaa43c 437 Gene3D G3DSA:3.40.720.10 2 436 2.2E-78 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 MC28_5118 a029db14376320f5ae22f9f187aaa43c 437 SUPERFAMILY SSF53649 7 420 8.01E-77 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 MC28_5029 028d2d0ad491b23d230dd295d760a7bd 155 Pfam PF13787 Protein of unknown function with HXXEE motif 11 115 2.3E-13 T 14-10-2018 IPR025671 Protein of unknown function with HXXEE motif MC28_G155 1cdc82e0855be10d84c61d8f2a0e5516 165 Pfam PF14270 Domain of unknown function (DUF4358) 54 150 2.8E-28 T 14-10-2018 IPR025648 Protein of unknown function DUF4358 MC28_0038 57a45c11d938cc669be6a14da7d088e8 369 Pfam PF03845 Spore germination protein 9 321 6.8E-82 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_0038 57a45c11d938cc669be6a14da7d088e8 369 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 10 355 1.3E-44 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 MC28_F274 4f4c61dd7b580ae0cceb2d4ef79dbbca 91 Pfam PF01337 Barstar (barnase inhibitor) 5 82 8.4E-22 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) MC28_F274 4f4c61dd7b580ae0cceb2d4ef79dbbca 91 Gene3D G3DSA:3.30.370.10 1 90 4.5E-31 T 14-10-2018 IPR035905 Barstar-like superfamily MC28_F274 4f4c61dd7b580ae0cceb2d4ef79dbbca 91 SUPERFAMILY SSF52038 1 89 7.85E-26 T 14-10-2018 IPR035905 Barstar-like superfamily MC28_1825 d621395b3c2daccf4a05feea59264db5 257 Pfam PF13105 Protein of unknown function (DUF3959) 9 253 1.4E-171 T 14-10-2018 IPR025080 Protein of unknown function DUF3959 MC28_E100 eedc4fe187c5755cf8b4fdb2276ac9aa 122 Pfam PF13152 Protein of unknown function (DUF3967) 85 117 1.7E-11 T 14-10-2018 IPR025052 Domain of unknown function DUF3967 MC28_0464 32a78e56f4617684cf657f62216ffabb 258 Pfam PF00290 Tryptophan synthase alpha chain 10 255 3.5E-90 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 MC28_0464 32a78e56f4617684cf657f62216ffabb 258 SUPERFAMILY SSF51366 6 252 4.14E-85 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 MC28_0464 32a78e56f4617684cf657f62216ffabb 258 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 11 248 7.4E-79 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 MC28_0464 32a78e56f4617684cf657f62216ffabb 258 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 46 59 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 MC28_0464 32a78e56f4617684cf657f62216ffabb 258 Gene3D G3DSA:3.20.20.70 3 257 9.8E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 MC28_0464 32a78e56f4617684cf657f62216ffabb 258 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 11 255 33.73 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 MC28_E094 9d1a5947bfbcc2f2d4fcd4827aa9acd8 550 Gene3D G3DSA:2.60.120.260 356 483 6.7E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_E094 9d1a5947bfbcc2f2d4fcd4827aa9acd8 550 SUPERFAMILY SSF49785 360 483 2.27E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_F156 9806f7ffa963dac62d3d819c619fab38 237 Pfam PF14329 Domain of unknown function (DUF4386) 21 228 4.5E-41 T 14-10-2018 IPR025495 Protein of unknown function DUF4386 MC28_2126 6ffa211f15b25b499d3f6c6437c79772 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 131 2.5E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_2126 6ffa211f15b25b499d3f6c6437c79772 138 SUPERFAMILY SSF54593 14 134 7.01E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2126 6ffa211f15b25b499d3f6c6437c79772 138 Gene3D G3DSA:3.10.180.10 6 137 4.2E-51 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2817 b1198195285a23345a151cb702b4826a 66 Pfam PF13043 Domain of unknown function (DUF3903) 25 64 2.1E-26 T 14-10-2018 IPR025000 Protein of unknown function DUF3903 MC28_3707 6f6c5307715212e9a1783884b65b7538 127 Pfam PF12670 Protein of unknown function (DUF3792) 10 119 3.3E-19 T 14-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane MC28_3707 6f6c5307715212e9a1783884b65b7538 127 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 10 122 1.3E-25 T 14-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane MC28_3485 f0477eba3dceccedaf89bc7f65bc4528 171 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 171 1.2E-71 T 14-10-2018 IPR014198 Stage III sporulation protein AB MC28_3485 f0477eba3dceccedaf89bc7f65bc4528 171 PIRSF PIRSF021435 1 171 8.8E-74 T 14-10-2018 IPR014198 Stage III sporulation protein AB MC28_3485 f0477eba3dceccedaf89bc7f65bc4528 171 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 171 3.3E-57 T 14-10-2018 IPR014198 Stage III sporulation protein AB MC28_2227 2724a2f419a61f4b884fd06b01c5b4d0 185 PIRSF PIRSF033634 65 185 1.1E-33 T 14-10-2018 IPR017018 Uncharacterised conserved protein UCP033634 MC28_2227 2724a2f419a61f4b884fd06b01c5b4d0 185 PIRSF PIRSF033634 1 67 1.0E-23 T 14-10-2018 IPR017018 Uncharacterised conserved protein UCP033634 MC28_0468 8e072c7c796ef133235a3d47f90f11b8 79 Pfam PF05593 RHS Repeat 19 53 8.9E-9 T 14-10-2018 IPR031325 RHS repeat MC28_0468 8e072c7c796ef133235a3d47f90f11b8 79 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 19 47 4.6E-4 T 14-10-2018 IPR006530 YD repeat MC28_4134 04cc3ddabde44c911d2abdae008ea55a 338 SUPERFAMILY SSF53613 1 328 2.18E-63 T 14-10-2018 IPR029056 Ribokinase-like MC28_4134 04cc3ddabde44c911d2abdae008ea55a 338 Gene3D G3DSA:3.40.1190.20 2 338 3.6E-102 T 14-10-2018 IPR029056 Ribokinase-like MC28_4134 04cc3ddabde44c911d2abdae008ea55a 338 Pfam PF00294 pfkB family carbohydrate kinase 3 317 1.3E-32 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB MC28_0445 f4da9235a66dceaca457d5cad69125c0 119 Pfam PF07098 Protein of unknown function (DUF1360) 11 112 1.4E-37 T 14-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 MC28_3220 5bc1325b698882dffb7310d84681e4db 82 Pfam PF14003 YlbE-like protein 15 74 4.6E-27 T 14-10-2018 IPR025613 YlbE-like protein MC28_3354 5732b32c669f813493edeac26cb159d5 288 Pfam PF06207 Protein of unknown function (DUF1002) 34 251 3.8E-77 T 14-10-2018 IPR009343 Protein of unknown function DUF1002 MC28_4228 9b4ead449226a058577c1df55e421889 88 Pfam PF11256 Protein of unknown function (DUF3055) 7 85 3.0E-36 T 14-10-2018 IPR021415 Protein of unknown function DUF3055 MC28_1553 966db87d104e8b8de914f5da962b052c 89 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 23 38 - T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 MC28_1553 966db87d104e8b8de914f5da962b052c 89 Pfam PF01679 Proteolipid membrane potential modulator 20 64 1.3E-11 T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 MC28_1418 430995df702834eac7e12240fd44ca2b 61 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 60 18.949 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MC28_1418 430995df702834eac7e12240fd44ca2b 61 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 2.2E-6 T 14-10-2018 MC28_1418 430995df702834eac7e12240fd44ca2b 61 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 2.2E-6 T 14-10-2018 MC28_1418 430995df702834eac7e12240fd44ca2b 61 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 2.2E-6 T 14-10-2018 MC28_1418 430995df702834eac7e12240fd44ca2b 61 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 49 7.1E-20 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MC28_1418 430995df702834eac7e12240fd44ca2b 61 Pfam PF02416 mttA/Hcf106 family 5 56 5.5E-22 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 MC28_1940 7fa5147d76d3ecbade3f0896f7a6d17b 389 Gene3D G3DSA:3.30.420.40 6 212 1.3E-12 T 14-10-2018 MC28_1940 7fa5147d76d3ecbade3f0896f7a6d17b 389 SUPERFAMILY SSF53067 6 189 1.12E-6 T 14-10-2018 MC28_1940 7fa5147d76d3ecbade3f0896f7a6d17b 389 SUPERFAMILY SSF53067 213 367 5.92E-12 T 14-10-2018 MC28_1940 7fa5147d76d3ecbade3f0896f7a6d17b 389 Gene3D G3DSA:3.30.420.40 213 344 5.0E-11 T 14-10-2018 MC28_2918 5aebcefdff8801df6901722c3ab994f9 303 Gene3D G3DSA:3.90.25.10 170 288 7.0E-59 T 14-10-2018 MC28_2918 5aebcefdff8801df6901722c3ab994f9 303 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 230 7.2E-40 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 MC28_2918 5aebcefdff8801df6901722c3ab994f9 303 SUPERFAMILY SSF51735 3 295 1.78E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_2918 5aebcefdff8801df6901722c3ab994f9 303 Gene3D G3DSA:3.40.50.720 8 281 7.0E-59 T 14-10-2018 MC28_1908 795497d0c1007c88ea5188503dda8ae5 456 Pfam PF07995 Glucose / Sorbosone dehydrogenase 13 257 1.3E-10 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase MC28_1908 795497d0c1007c88ea5188503dda8ae5 456 Gene3D G3DSA:2.120.10.30 2 413 1.7E-25 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like MC28_1908 795497d0c1007c88ea5188503dda8ae5 456 SUPERFAMILY SSF50952 40 301 4.32E-12 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 MC28_2116 f33e9c00031f824386738c0861c43be9 387 Pfam PF04235 Protein of unknown function (DUF418) 225 387 9.2E-25 T 14-10-2018 IPR007349 Domain of unknown function DUF418 MC28_3997 04623b03c9d38bb7e60749c79b068fe7 140 Pfam PF13027 Protein of unknown function (DUF3888) 32 113 5.1E-16 T 14-10-2018 IPR024984 Protein of unknown function DUF3888 MC28_5184 aad4c1e9b86d814ccd47b88974e860d7 162 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 7 151 2.7E-20 T 14-10-2018 IPR006524 Transcription activator, ArpU family MC28_D150 dab963cd49d694600f046a5a3220c213 169 Pfam PF02517 CAAX protease self-immunity 74 161 4.8E-15 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_0233 d2643e1d7b2ff4f4c0f08b75ea8efd0e 83 Pfam PF04226 Transglycosylase associated protein 33 78 4.9E-11 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 MC28_2720 d26d7e8efc66f873d7640c83304e3ca2 114 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 3 111 7.5E-35 T 14-10-2018 IPR018745 Domain of unknown function DUF2294 MC28_1630 f6dbdc5cfe7ff0fbca107c7aa69c9eb9 169 Pfam PF00583 Acetyltransferase (GNAT) family 43 135 1.3E-19 T 14-10-2018 IPR000182 GNAT domain MC28_1630 f6dbdc5cfe7ff0fbca107c7aa69c9eb9 169 Gene3D G3DSA:3.40.630.30 2 164 6.4E-37 T 14-10-2018 MC28_1630 f6dbdc5cfe7ff0fbca107c7aa69c9eb9 169 SUPERFAMILY SSF55729 3 160 3.26E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_B21 58ec08a3386799ebfedc4941bb7c224d 662 Gene3D G3DSA:2.60.120.260 176 304 4.4E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_B21 58ec08a3386799ebfedc4941bb7c224d 662 Gene3D G3DSA:2.60.120.260 39 150 4.8E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily MC28_4481 113acf760617ebd941a605458a71a0b0 71 Pfam PF11148 Protein of unknown function (DUF2922) 3 66 3.5E-17 T 14-10-2018 IPR021321 Protein of unknown function DUF2922 MC28_5382 eb59194f677616fd35b2c4a684d5bdbf 140 Pfam PF00582 Universal stress protein family 1 140 2.4E-29 T 14-10-2018 IPR006016 UspA MC28_5382 eb59194f677616fd35b2c4a684d5bdbf 140 PRINTS PR01438 Universal stress protein signature 118 140 2.0E-19 T 14-10-2018 IPR006015 Universal stress protein A MC28_5382 eb59194f677616fd35b2c4a684d5bdbf 140 PRINTS PR01438 Universal stress protein signature 2 20 2.0E-19 T 14-10-2018 IPR006015 Universal stress protein A MC28_5382 eb59194f677616fd35b2c4a684d5bdbf 140 PRINTS PR01438 Universal stress protein signature 100 112 2.0E-19 T 14-10-2018 IPR006015 Universal stress protein A MC28_5382 eb59194f677616fd35b2c4a684d5bdbf 140 SUPERFAMILY SSF52402 2 140 3.35E-31 T 14-10-2018 MC28_5382 eb59194f677616fd35b2c4a684d5bdbf 140 Gene3D G3DSA:3.40.50.620 1 140 7.9E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MC28_0860 a3542d3784ee8c9646a99b785f3f12ba 221 Gene3D G3DSA:3.30.240.20 77 146 1.6E-19 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_0860 a3542d3784ee8c9646a99b785f3f12ba 221 Pfam PF04239 Protein of unknown function (DUF421) 82 198 1.9E-32 T 14-10-2018 IPR007353 Protein of unknown function DUF421 MC28_0860 a3542d3784ee8c9646a99b785f3f12ba 221 Gene3D G3DSA:3.30.240.20 162 221 1.0E-17 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily MC28_2403 b07e45bd26ae3092038b71e00f71470e 108 Pfam PF13034 Protein of unknown function (DUF3895) 26 100 2.3E-33 T 14-10-2018 IPR024995 Protein of unknown function DUF3895 MC28_2617 70b686b18e683b3c5c95d965ffcba30c 116 Pfam PF08830 Protein of unknown function (DUF1806) 8 115 1.3E-54 T 14-10-2018 IPR014934 Protein of unknown function DUF1806 MC28_2617 70b686b18e683b3c5c95d965ffcba30c 116 Gene3D G3DSA:2.70.180.10 2 116 9.2E-51 T 14-10-2018 IPR036492 Hypothetical protein YojF superfamily MC28_2617 70b686b18e683b3c5c95d965ffcba30c 116 SUPERFAMILY SSF89442 8 116 4.97E-54 T 14-10-2018 IPR036492 Hypothetical protein YojF superfamily MC28_1995 cf140d6a57175a108752ef7abdc34d56 138 Pfam PF00583 Acetyltransferase (GNAT) family 37 116 3.7E-13 T 14-10-2018 IPR000182 GNAT domain MC28_1995 cf140d6a57175a108752ef7abdc34d56 138 Gene3D G3DSA:3.40.630.30 35 138 4.1E-29 T 14-10-2018 MC28_1995 cf140d6a57175a108752ef7abdc34d56 138 SUPERFAMILY SSF55729 23 138 2.26E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_0279 6cb0b2579644a7d4f85023d4fd243838 120 Pfam PF12732 YtxH-like protein 9 83 4.3E-10 T 14-10-2018 IPR024623 Uncharacterised protein family YtxH MC28_3376 eb46b77bc04cad3f07d7d156399b0d2b 429 Pfam PF00860 Permease family 20 387 1.0E-32 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 MC28_5076 551aedde66768e9570d1b883322d592c 225 Gene3D G3DSA:3.50.30.50 14 224 2.0E-66 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 MC28_5076 551aedde66768e9570d1b883322d592c 225 Pfam PF04199 Putative cyclase 19 166 1.1E-26 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 MC28_5076 551aedde66768e9570d1b883322d592c 225 SUPERFAMILY SSF102198 16 223 2.35E-60 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 MC28_1512 1d43877344dbadc616212d699df8c398 146 Pfam PF13048 Protein of unknown function (DUF3908) 19 134 2.0E-11 T 14-10-2018 IPR025020 Protein of unknown function DUF3908 MC28_3993 312ef6c83dade9d3c0c5d176540d4abf 60 Pfam PF10957 Sporulation protein Cse60 1 60 1.1E-34 T 14-10-2018 IPR020296 Sporulation protein Cse60 MC28_3993 312ef6c83dade9d3c0c5d176540d4abf 60 ProDom PD052690 CSE60 CYTOSOLIC YTEV LJ928 SPORULATION ORF85 PROPHAGE 1 59 2.0E-26 T 14-10-2018 IPR020296 Sporulation protein Cse60 MC28_0149 94a4e43dffda61f90d0800f439f2d9ef 456 Pfam PF13425 O-antigen ligase like membrane protein 14 453 1.2E-123 T 14-10-2018 MC28_1250 29f75e3ca5bc606c4814e5deab248d7f 338 Pfam PF10947 Protein of unknown function (DUF2628) 52 150 1.3E-22 T 14-10-2018 IPR024399 Protein of unknown function DUF2628 MC28_4607 bf8dd0052894eab1b83dcf503fe4fc26 241 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 9 233 5.0E-46 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 MC28_4607 bf8dd0052894eab1b83dcf503fe4fc26 241 Gene3D G3DSA:3.20.20.190 1 241 5.6E-84 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_4607 bf8dd0052894eab1b83dcf503fe4fc26 241 SUPERFAMILY SSF51695 2 240 1.7E-76 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 MC28_4330 1128c0c0b33366e80bb586ae7d12d0d4 146 Pfam PF07849 Protein of unknown function (DUF1641) 107 128 7.0E-5 T 14-10-2018 IPR012440 Protein of unknown function DUF1641 MC28_4257 f4fd16b15924c3932a9993fbc90e19de 134 Gene3D G3DSA:3.40.30.10 12 129 3.4E-46 T 14-10-2018 MC28_4257 f4fd16b15924c3932a9993fbc90e19de 134 SUPERFAMILY SSF52833 15 130 1.44E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_4257 f4fd16b15924c3932a9993fbc90e19de 134 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 16 130 1.2E-33 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR MC28_4257 f4fd16b15924c3932a9993fbc90e19de 134 Pfam PF03960 ArsC family 37 127 2.2E-16 T 14-10-2018 IPR006660 Arsenate reductase-like MC28_4100 e24d181b3fddfdebeeff51fce53234ba 148 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 113 145 5.1E-4 T 14-10-2018 MC28_2203 f1a5e3a103ee29ae8f0e6ac476821674 369 Pfam PF13210 Domain of unknown function (DUF4018) 48 239 7.0E-86 T 14-10-2018 IPR025089 Protein of unknown function DUF4018 MC28_F231 cfc23f46fb718ee0810b6588967c3fe6 55 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 1 49 2.3E-9 T 14-10-2018 IPR026834 LHH MC28_5344 42c1a8c7409bbd41c097e2e714486c88 243 Gene3D G3DSA:3.40.50.150 30 243 5.0E-54 T 14-10-2018 MC28_5344 42c1a8c7409bbd41c097e2e714486c88 243 Pfam PF13489 Methyltransferase domain 43 209 6.8E-14 T 14-10-2018 MC28_5344 42c1a8c7409bbd41c097e2e714486c88 243 SUPERFAMILY SSF53335 14 243 7.04E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2805 17c722f67a0cd9734afac356253fefc1 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 214 3.0E-63 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 MC28_3526 778680fcab4082c175aec2696a5a2187 49 Pfam PF14038 YqzE-like protein 1 38 8.8E-16 T 14-10-2018 IPR025622 YqzE-like protein MC28_4294 bec0d9c0f45b987da00c6d0c638cbbd4 204 Pfam PF09335 SNARE associated Golgi protein 29 154 3.6E-18 T 14-10-2018 IPR032816 SNARE associated Golgi protein MC28_3936 6e07181b811e093de144903cafe887f0 95 Pfam PF14154 Domain of unknown function (DUF4306) 1 87 2.3E-36 T 14-10-2018 IPR025440 Protein of unknown function DUF4306 MC28_2159 31a2f9cf1fb7f852fc312f7e9ec3233e 347 SUPERFAMILY SSF53822 34 347 4.71E-80 T 14-10-2018 IPR028082 Periplasmic binding protein-like I MC28_2159 31a2f9cf1fb7f852fc312f7e9ec3233e 347 Gene3D G3DSA:3.40.50.2300 36 331 1.0E-105 T 14-10-2018 MC28_2159 31a2f9cf1fb7f852fc312f7e9ec3233e 347 Pfam PF13407 Periplasmic binding protein domain 36 294 1.1E-54 T 14-10-2018 IPR025997 Periplasmic binding protein MC28_2159 31a2f9cf1fb7f852fc312f7e9ec3233e 347 Gene3D G3DSA:3.40.50.2300 136 347 1.0E-105 T 14-10-2018 MC28_D131 e084c00a40bf75fa89c07ff7ee66befe 93 ProDom PD282039 PLASMID PXO2-04/BXB0002/GBAA_PXO2_0002 1 89 2.0E-30 T 14-10-2018 IPR020267 Uncharacterised protein family pXO2-04 MC28_0169 0bb8317f7d36ea66554aacb12782e60f 160 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 154 2.3E-47 T 14-10-2018 IPR006728 Protein of unknown function DUF600 MC28_0169 0bb8317f7d36ea66554aacb12782e60f 160 SUPERFAMILY SSF160424 4 158 1.57E-49 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily MC28_0169 0bb8317f7d36ea66554aacb12782e60f 160 Gene3D G3DSA:3.30.500.20 1 117 1.4E-40 T 14-10-2018 MC28_0169 0bb8317f7d36ea66554aacb12782e60f 160 Pfam PF04634 Protein of unknown function, DUF600 6 148 3.2E-51 T 14-10-2018 IPR006728 Protein of unknown function DUF600 MC28_1580 e9e610afde5f2b238afbfdd4e7fb5573 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 7.2E-7 T 14-10-2018 MC28_1580 e9e610afde5f2b238afbfdd4e7fb5573 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 7.2E-7 T 14-10-2018 MC28_1580 e9e610afde5f2b238afbfdd4e7fb5573 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 7.2E-7 T 14-10-2018 MC28_1580 e9e610afde5f2b238afbfdd4e7fb5573 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 7.2E-7 T 14-10-2018 MC28_1580 e9e610afde5f2b238afbfdd4e7fb5573 480 Gene3D G3DSA:1.20.1720.10 12 238 3.9E-50 T 14-10-2018 MC28_1580 e9e610afde5f2b238afbfdd4e7fb5573 480 SUPERFAMILY SSF103473 11 458 7.67E-71 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_1580 e9e610afde5f2b238afbfdd4e7fb5573 480 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 421 4.1E-99 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 MC28_1580 e9e610afde5f2b238afbfdd4e7fb5573 480 Pfam PF07690 Major Facilitator Superfamily 17 406 6.8E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_1580 e9e610afde5f2b238afbfdd4e7fb5573 480 Gene3D G3DSA:1.20.1250.20 256 467 2.1E-22 T 14-10-2018 MC28_4662 80ce654bc683932fd999d8c9848818d0 316 Pfam PF13460 NAD(P)H-binding 14 118 2.8E-15 T 14-10-2018 IPR016040 NAD(P)-binding domain MC28_4662 80ce654bc683932fd999d8c9848818d0 316 SUPERFAMILY SSF51735 7 312 4.03E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily MC28_4662 80ce654bc683932fd999d8c9848818d0 316 Gene3D G3DSA:3.40.50.720 4 316 2.3E-33 T 14-10-2018 MC28_3392 272d20adceafb7b9a4a98cb8c7fe9d96 90 Pfam PF13025 Protein of unknown function (DUF3886) 22 88 1.1E-21 T 14-10-2018 IPR024980 Protein of unknown function DUF3886 MC28_E014 4bb7092f9d89a4556cb4b7842e223f24 90 Pfam PF17362 Family of unknown function 12 90 4.8E-31 T 14-10-2018 IPR020270 Uncharacterised protein family, plasmid pXO2-34 MC28_G321 e5a603839b264442d016c280da1143fd 59 Gene3D G3DSA:3.10.105.10 1 56 5.2E-7 T 14-10-2018 MC28_E160 87aeee29b9aa9936d970002960f9a0c2 227 SUPERFAMILY SSF53098 69 188 1.29E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_E160 87aeee29b9aa9936d970002960f9a0c2 227 Pfam PF13610 DDE domain 70 205 5.2E-43 T 14-10-2018 IPR032874 DDE domain MC28_1637 c6db9d8a48de336a9457d97c1d1b391e 183 SUPERFAMILY SSF55729 3 174 1.41E-45 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1637 c6db9d8a48de336a9457d97c1d1b391e 183 Gene3D G3DSA:3.40.630.30 2 182 2.2E-43 T 14-10-2018 MC28_1637 c6db9d8a48de336a9457d97c1d1b391e 183 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 3.5E-26 T 14-10-2018 IPR000182 GNAT domain MC28_4140 ff5b00191374bdf18e0621f06ebf32be 232 Pfam PF00072 Response regulator receiver domain 6 115 6.3E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4140 ff5b00191374bdf18e0621f06ebf32be 232 SUPERFAMILY SSF52172 1 190 2.99E-44 T 14-10-2018 IPR011006 CheY-like superfamily MC28_4140 ff5b00191374bdf18e0621f06ebf32be 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 3.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_4140 ff5b00191374bdf18e0621f06ebf32be 232 Gene3D G3DSA:3.40.50.2300 1 130 2.1E-40 T 14-10-2018 MC28_4140 ff5b00191374bdf18e0621f06ebf32be 232 SMART SM00448 4 114 7.0E-46 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_4140 ff5b00191374bdf18e0621f06ebf32be 232 Gene3D G3DSA:1.10.10.10 131 232 1.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_4140 ff5b00191374bdf18e0621f06ebf32be 232 SMART SM00862 154 230 6.0E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MC28_3555 cd679589af8446c1657e6ffa344dfe24 57 Pfam PF10958 Protein of unknown function (DUF2759) 6 55 8.2E-24 T 14-10-2018 IPR024490 Protein of unknown function DUF2759 MC28_3555 cd679589af8446c1657e6ffa344dfe24 57 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 1 54 1.0E-12 T 14-10-2018 IPR024490 Protein of unknown function DUF2759 MC28_G237 0f95f70328e6092d8fa00379a4a9b372 635 Pfam PF08017 Fibrinogen binding protein 99 365 9.3E-13 T 14-10-2018 IPR012969 Fibrinogen binding protein MC28_D036 7e6e0cb50c816c532564dac2199b965a 493 Pfam PF17633 Family of unknown function (DUF5514) 369 492 2.6E-39 T 14-10-2018 IPR035115 Protein of unknown function DUF5514 MC28_D036 7e6e0cb50c816c532564dac2199b965a 493 ProDom PD299256 PLASMID PXO2-83/BXB0113/GBAA_PXO2_0113 368 493 2.0E-68 T 14-10-2018 IPR035115 Protein of unknown function DUF5514 MC28_3461 ce58049b75b9ec76580d529046aa32d7 48 Pfam PF14174 YycC-like protein 1 47 1.2E-28 T 14-10-2018 IPR025550 YycC-like protein MC28_C053 24674f59f06bb2765ab9080dde19fa41 68 Pfam PF00892 EamA-like transporter family 1 50 7.8E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_C053 24674f59f06bb2765ab9080dde19fa41 68 SUPERFAMILY SSF103481 3 55 1.57E-10 T 14-10-2018 MC28_2691 3987a5a806c0133e05f192f898f5497c 206 Pfam PF01184 GPR1/FUN34/yaaH family 8 197 2.5E-23 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 MC28_2054 dc630070cc605b379a36a81653b9cbb4 224 Gene3D G3DSA:1.10.150.240 16 89 1.2E-31 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MC28_2054 dc630070cc605b379a36a81653b9cbb4 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 185 3.7E-16 T 14-10-2018 MC28_2054 dc630070cc605b379a36a81653b9cbb4 224 SUPERFAMILY SSF56784 1 216 5.74E-41 T 14-10-2018 IPR036412 HAD-like superfamily MC28_2054 dc630070cc605b379a36a81653b9cbb4 224 Gene3D G3DSA:3.40.50.1000 5 205 1.2E-31 T 14-10-2018 IPR023214 HAD superfamily MC28_1548 98e7fb9126c4601d0129b2205176eb7d 74 Pfam PF10676 Spore germination protein gerPA/gerPF 4 72 3.3E-24 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF MC28_3529 8adcfce55aa5f8899f1a0bb4e8e5be6b 123 Pfam PF14173 ComG operon protein 7 30 122 1.9E-27 T 14-10-2018 IPR020372 Competence operon G protein 7, ComGG MC28_2157 aa55ffe6e9cc774ef5ee89fdc74ecc00 348 PIRSF PIRSF012608 1 348 1.3E-137 T 14-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 MC28_2157 aa55ffe6e9cc774ef5ee89fdc74ecc00 348 Pfam PF10094 Uncharacterized protein conserved in bacteria (DUF2332) 10 340 4.0E-113 T 14-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 MC28_1182 f00da2b9ae693fe3cf3c3b624774fea2 226 Pfam PF02308 MgtC family 9 138 3.0E-34 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_1182 f00da2b9ae693fe3cf3c3b624774fea2 226 PRINTS PR01837 MgtC/SapB protein signature 93 117 3.7E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_1182 f00da2b9ae693fe3cf3c3b624774fea2 226 PRINTS PR01837 MgtC/SapB protein signature 12 31 3.7E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_1182 f00da2b9ae693fe3cf3c3b624774fea2 226 PRINTS PR01837 MgtC/SapB protein signature 65 87 3.7E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_1182 f00da2b9ae693fe3cf3c3b624774fea2 226 PRINTS PR01837 MgtC/SapB protein signature 31 49 3.7E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MC28_5417 0f2378d1a8adb37566d38b206a5dc00f 579 Pfam PF10101 Predicted membrane protein (DUF2339) 102 414 7.9E-32 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane MC28_5417 0f2378d1a8adb37566d38b206a5dc00f 579 Pfam PF10101 Predicted membrane protein (DUF2339) 395 570 5.0E-10 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane MC28_1022 caf774b70eadecbaff2b2b4e6b0033ca 445 SUPERFAMILY SSF161070 5 442 1.83E-130 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 MC28_1022 caf774b70eadecbaff2b2b4e6b0033ca 445 Pfam PF00209 Sodium:neurotransmitter symporter family 4 122 3.4E-23 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1022 caf774b70eadecbaff2b2b4e6b0033ca 445 Pfam PF00209 Sodium:neurotransmitter symporter family 148 440 3.9E-28 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1022 caf774b70eadecbaff2b2b4e6b0033ca 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 8.4E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1022 caf774b70eadecbaff2b2b4e6b0033ca 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 86 112 8.4E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_1022 caf774b70eadecbaff2b2b4e6b0033ca 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 8.4E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 MC28_4703 e3d2f1ccb9ab8c9acd198709e6bb12f0 311 Pfam PF09991 Predicted membrane protein (DUF2232) 15 301 1.6E-81 T 14-10-2018 IPR018710 Protein of unknown function DUF2232 MC28_1429 8101c3a0818c456337a6eba436fc6309 305 Pfam PF01497 Periplasmic binding protein 43 279 4.2E-33 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_1429 8101c3a0818c456337a6eba436fc6309 305 Gene3D G3DSA:3.40.50.1980 24 129 2.8E-33 T 14-10-2018 MC28_1429 8101c3a0818c456337a6eba436fc6309 305 Gene3D G3DSA:3.40.50.1980 130 305 8.9E-66 T 14-10-2018 MC28_1429 8101c3a0818c456337a6eba436fc6309 305 SUPERFAMILY SSF53807 26 299 9.6E-67 T 14-10-2018 MC28_D128 07c1176711b30d0de62e0a20aac2ef83 207 ProDom PD310412 PLASMID PXO2-07/BXB0006/GBAA_PXO2_0006 6 207 1.0E-82 T 14-10-2018 IPR020522 Uncharacterised protein family, plasmid pXO2-07 MC28_F136 0cef99f7f30fbf13d0f5861c8e88a8ad 218 Gene3D G3DSA:1.10.530.10 42 199 3.8E-43 T 14-10-2018 MC28_F136 0cef99f7f30fbf13d0f5861c8e88a8ad 218 SUPERFAMILY SSF53955 49 142 9.0E-9 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily MC28_F136 0cef99f7f30fbf13d0f5861c8e88a8ad 218 Pfam PF13702 Lysozyme-like 45 199 8.5E-49 T 14-10-2018 MC28_4416 a542e4b74737164ba099b59d206497eb 275 Pfam PF02687 FtsX-like permease family 180 265 3.8E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_4416 a542e4b74737164ba099b59d206497eb 275 PIRSF PIRSF003097 1 275 1.0E-81 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 MC28_4416 a542e4b74737164ba099b59d206497eb 275 Gene3D G3DSA:3.30.70.3040 25 134 1.4E-6 T 14-10-2018 MC28_1417 6bc9bcb478be2d6f378f61ed7afac11d 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 214 5.9E-74 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 MC28_1417 6bc9bcb478be2d6f378f61ed7afac11d 218 Pfam PF03006 Haemolysin-III related 13 206 4.5E-42 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 MC28_1948 e83389760d61994cbf4e6972146bb2d0 126 Pfam PF13028 Protein of unknown function (DUF3889) 44 122 1.2E-30 T 14-10-2018 IPR024987 Protein of unknown function DUF3889 MC28_1948 e83389760d61994cbf4e6972146bb2d0 126 Gene3D G3DSA:3.10.450.390 40 125 1.1E-30 T 14-10-2018 MC28_1091 b43b8a5eaadfc2e3c2a66aee453248a2 59 SUPERFAMILY SSF159121 6 57 8.63E-14 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_1091 b43b8a5eaadfc2e3c2a66aee453248a2 59 Pfam PF06486 Protein of unknown function (DUF1093) 6 46 5.4E-9 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 MC28_1091 b43b8a5eaadfc2e3c2a66aee453248a2 59 Gene3D G3DSA:2.40.50.480 2 59 9.8E-17 T 14-10-2018 IPR036166 YxeA-like superfamily MC28_3913 721a34bbd730c311c37a8a210aefced1 211 Pfam PF08795 Putative papain-like cysteine peptidase (DUF1796) 12 160 2.0E-15 T 14-10-2018 IPR014903 Protein of unknown function DUF1796 MC28_5372 dd1a09e0d09d344cff2798df1b706afb 125 Pfam PF02566 OsmC-like protein 22 118 4.8E-21 T 14-10-2018 IPR003718 OsmC/Ohr family MC28_5372 dd1a09e0d09d344cff2798df1b706afb 125 Gene3D G3DSA:3.30.300.20 2 124 6.9E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta MC28_5372 dd1a09e0d09d344cff2798df1b706afb 125 SUPERFAMILY SSF82784 4 123 1.96E-25 T 14-10-2018 IPR036102 OsmC/Ohr superfamily MC28_2599 17e24e92a8ccb5e9e73f99547bca6047 148 Pfam PF04657 Putative inner membrane exporter, YdcZ 10 144 1.3E-29 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ MC28_4560 9e0cdfcf26c04d15a32e13ff737d6272 92 Pfam PF13071 Protein of unknown function (DUF3935) 2 71 4.8E-47 T 14-10-2018 IPR025176 Protein of unknown function DUF3935 MC28_2850 86e6ce69b49021f923d8f696ba68ecf5 321 SUPERFAMILY SSF51126 116 312 7.18E-7 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor MC28_4012 26446eab40a695dcd8c7142760261b19 455 PIRSF PIRSF005690 1 445 1.6E-133 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_4012 26446eab40a695dcd8c7142760261b19 455 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 6 430 4.7E-143 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_0422 b2700b779ebef46fc99d6c38be848e69 123 Hamap MF_01861 UPF0738 protein . 3 123 28.808 T 14-10-2018 IPR020908 Uncharacterised protein family UPF0738 MC28_5210 967b27ef9d413c7f0d4108647fdea70b 78 Pfam PF10779 Haemolysin XhlA 6 72 7.4E-16 T 14-10-2018 IPR019715 Haemolysin XhlA MC28_E024 babe9cd962c7a12e6b4b94df6d2ddbbb 396 Gene3D G3DSA:3.30.420.40 230 358 1.9E-15 T 14-10-2018 MC28_E024 babe9cd962c7a12e6b4b94df6d2ddbbb 396 Gene3D G3DSA:3.30.420.40 9 229 1.3E-12 T 14-10-2018 MC28_E024 babe9cd962c7a12e6b4b94df6d2ddbbb 396 SUPERFAMILY SSF53067 227 382 1.44E-9 T 14-10-2018 MC28_1084 ee1edde20f691cde2b29a7defa4d32b4 487 SUPERFAMILY SSF50939 212 403 6.87E-11 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 MC28_5400 0d9212d8d076ea9f842df03cd1ebef01 70 SUPERFAMILY SSF81324 2 63 3.14E-16 T 14-10-2018 MC28_5400 0d9212d8d076ea9f842df03cd1ebef01 70 Pfam PF07885 Ion channel 2 55 5.9E-16 T 14-10-2018 IPR013099 Potassium channel domain MC28_5400 0d9212d8d076ea9f842df03cd1ebef01 70 Gene3D G3DSA:1.10.287.70 1 70 2.4E-28 T 14-10-2018 MC28_1334 b7119fa14abd28b963b681ab02b99447 73 Pfam PF13063 Protein of unknown function (DUF3925) 5 69 1.1E-44 T 14-10-2018 IPR025168 Protein of unknown function DUF3925 MC28_4602 4769feb55d8a26a12459745bd810209f 360 Pfam PF13303 Phosphotransferase system, EIIC 43 346 3.9E-59 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_4611 0fa20371b0cadb220649bb6efea18fe0 61 Pfam PF01361 Tautomerase enzyme 2 60 8.3E-25 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 MC28_4611 0fa20371b0cadb220649bb6efea18fe0 61 Gene3D G3DSA:3.30.429.10 1 60 3.4E-28 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily MC28_4611 0fa20371b0cadb220649bb6efea18fe0 61 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 60 2.3E-27 T 14-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 MC28_4611 0fa20371b0cadb220649bb6efea18fe0 61 SUPERFAMILY SSF55331 2 60 3.93E-20 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily MC28_1665 da913359c911490dea8ed32d8d3c199f 387 Pfam PF05816 Toxic anion resistance protein (TelA) 75 382 3.2E-54 T 14-10-2018 IPR008863 Toxic anion resistance MC28_1665 da913359c911490dea8ed32d8d3c199f 387 PIRSF PIRSF026508 30 387 2.1E-96 T 14-10-2018 IPR008863 Toxic anion resistance MC28_0790 ce982fff38c799c2dad71fc4acac23e6 169 Pfam PF14179 YppG-like protein 54 167 1.9E-28 T 14-10-2018 IPR025555 YppG-like protein MC28_1832 b1e529bb73e4a2b3a7aafc79b19c923d 209 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 122 150 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 MC28_1832 b1e529bb73e4a2b3a7aafc79b19c923d 209 SUPERFAMILY SSF51161 16 204 1.39E-47 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily MC28_1832 b1e529bb73e4a2b3a7aafc79b19c923d 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 148 3.6E-11 T 14-10-2018 IPR001451 Hexapeptide repeat MC28_1832 b1e529bb73e4a2b3a7aafc79b19c923d 209 Gene3D G3DSA:2.160.10.10 1 209 3.2E-81 T 14-10-2018 MC28_3813 1baf2c400584a4d63519973357544ddc 290 Pfam PF13349 Putative adhesin 41 288 1.9E-35 T 14-10-2018 IPR025164 Putative adhesin MC28_4244 312d289306dcfc76384e1dfb8a99ff7c 143 SUPERFAMILY SSF82649 2 141 2.72E-52 T 14-10-2018 MC28_4244 312d289306dcfc76384e1dfb8a99ff7c 143 Gene3D G3DSA:3.90.1010.10 2 143 5.7E-61 T 14-10-2018 MC28_4244 312d289306dcfc76384e1dfb8a99ff7c 143 Pfam PF01592 NifU-like N terminal domain 10 127 2.5E-37 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 MC28_4244 312d289306dcfc76384e1dfb8a99ff7c 143 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 139 1.6E-56 T 14-10-2018 MC28_0056 77000aca20029398fa2e330d6a076cd4 235 Pfam PF01925 Sulfite exporter TauE/SafE 1 228 3.1E-38 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 MC28_2543 8bd357bcf6e13134dc8c6c2e7a86367e 160 Pfam PF11188 Protein of unknown function (DUF2975) 34 160 4.3E-37 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 MC28_4685 8eb99e9402547ca87bbef15f06f9338c 186 Pfam PF08876 Domain of unknown function (DUF1836) 18 123 1.9E-30 T 14-10-2018 IPR014975 Protein of unknown function DUF1836 MC28_B70 c5d4e529f1688e402f567c883dfc2bc5 275 Pfam PF10668 Phage terminase small subunit 1 64 2.0E-22 T 14-10-2018 IPR018925 Phage terminase small subunit MC28_2757 f738b35eb31c0942c4f603490ea0c288 44 Hamap MF_01505 Small, acid-soluble spore protein N [sspN]. 1 44 15.192 T 14-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 MC28_2757 f738b35eb31c0942c4f603490ea0c288 44 Pfam PF08177 Small acid-soluble spore protein N family 1 43 1.8E-21 T 14-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 MC28_B01 3ef86f905aa4b512816f292c3fe78e20 172 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 64 170 3.0E-19 T 14-10-2018 IPR006528 Phage head morphogenesis domain MC28_B01 3ef86f905aa4b512816f292c3fe78e20 172 Pfam PF04233 Phage Mu protein F like protein 62 169 3.4E-20 T 14-10-2018 IPR006528 Phage head morphogenesis domain MC28_2166 4e7a508f3979281b76e8cd420cf7b9d0 120 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 34 109 0.009 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 MC28_2166 4e7a508f3979281b76e8cd420cf7b9d0 120 Pfam PF07883 Cupin domain 30 99 1.8E-19 T 14-10-2018 IPR013096 Cupin 2, conserved barrel MC28_2166 4e7a508f3979281b76e8cd420cf7b9d0 120 Gene3D G3DSA:2.60.120.10 3 119 6.0E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold MC28_2166 4e7a508f3979281b76e8cd420cf7b9d0 120 SUPERFAMILY SSF51182 23 103 2.01E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_5340 aa6f59f1113c5999982d9705ab9e8e3d 319 Gene3D G3DSA:3.40.50.1980 146 319 2.8E-73 T 14-10-2018 MC28_5340 aa6f59f1113c5999982d9705ab9e8e3d 319 Pfam PF01497 Periplasmic binding protein 59 293 1.8E-35 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain MC28_5340 aa6f59f1113c5999982d9705ab9e8e3d 319 Gene3D G3DSA:3.40.50.1980 39 145 1.2E-38 T 14-10-2018 MC28_5340 aa6f59f1113c5999982d9705ab9e8e3d 319 SUPERFAMILY SSF53807 41 313 7.85E-72 T 14-10-2018 MC28_3554 2c306609ef84dd642ba07c0619e72254 239 SUPERFAMILY SSF56281 31 239 8.78E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_3554 2c306609ef84dd642ba07c0619e72254 239 Pfam PF00753 Metallo-beta-lactamase superfamily 39 222 1.2E-32 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3554 2c306609ef84dd642ba07c0619e72254 239 SMART SM00849 42 222 6.3E-43 T 14-10-2018 IPR001279 Metallo-beta-lactamase MC28_3554 2c306609ef84dd642ba07c0619e72254 239 Gene3D G3DSA:3.60.15.10 31 239 8.8E-64 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MC28_2778 5a66cd8f5cd7835807b04f03549bd9a5 164 Gene3D G3DSA:3.40.630.30 1 156 1.2E-37 T 14-10-2018 MC28_2778 5a66cd8f5cd7835807b04f03549bd9a5 164 Pfam PF13302 Acetyltransferase (GNAT) domain 3 133 1.0E-25 T 14-10-2018 IPR000182 GNAT domain MC28_2778 5a66cd8f5cd7835807b04f03549bd9a5 164 SUPERFAMILY SSF55729 2 156 3.74E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_4205 7f02c0fa922a8ccce512816be0fd157c 94 Hamap MF_01542 UPF0349 protein . 17 93 29.983 T 14-10-2018 IPR022916 Protein of unknown function UPF0349 MC28_4205 7f02c0fa922a8ccce512816be0fd157c 94 Pfam PF07293 Protein of unknown function (DUF1450) 17 91 1.1E-34 T 14-10-2018 IPR009910 Protein of unknown function DUF1450 MC28_4205 7f02c0fa922a8ccce512816be0fd157c 94 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 17 93 3.0E-38 T 14-10-2018 MC28_D079 7833c5641df8bc972e8ba91aac8d7973 519 Pfam PF08708 Primase C terminal 1 (PriCT-1) 289 349 2.1E-11 T 14-10-2018 IPR014820 Primase, C-terminal 1 MC28_0448 a61305fb9f5825450a0c39147f3a86b6 156 Pfam PF10612 Spore coat protein Z 4 153 5.2E-40 T 14-10-2018 IPR019593 Spore coat protein Z/Y MC28_0946 15e7ae84388071444a0f42db544e2ed2 275 SUPERFAMILY SSF81606 101 237 1.31E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 MC28_0946 15e7ae84388071444a0f42db544e2ed2 275 Pfam PF13672 Protein phosphatase 2C 126 238 2.0E-7 T 14-10-2018 MC28_E035 9a807145c0563c3c071d7cbba981f36d 176 Gene3D G3DSA:3.40.50.300 122 176 5.8E-7 T 14-10-2018 MC28_3222 99f32fb360721781709b729fb48e59e2 350 SUPERFAMILY SSF55797 229 347 6.8E-22 T 14-10-2018 IPR035940 CAP superfamily MC28_3222 99f32fb360721781709b729fb48e59e2 350 Gene3D G3DSA:3.40.33.10 32 350 1.9E-100 T 14-10-2018 IPR035940 CAP superfamily MC28_3222 99f32fb360721781709b729fb48e59e2 350 Pfam PF14504 CAP-associated N-terminal 66 205 4.6E-47 T 14-10-2018 IPR029410 CAP-associated domain MC28_3222 99f32fb360721781709b729fb48e59e2 350 Pfam PF00188 Cysteine-rich secretory protein family 236 340 2.2E-16 T 14-10-2018 IPR014044 CAP domain MC28_1627 c6ba06d84d5fc49fc08bdf1860e979e5 58 Pfam PF13213 Protein of unknown function (DUF4021) 7 51 4.1E-22 T 14-10-2018 IPR025094 Protein of unknown function DUF4021 MC28_3521 0e88130c008d8d10615e4267aa415d9f 234 ProDom PD123329 YQHG BH2818 1 227 6.0E-131 T 14-10-2018 IPR024562 Uncharacterised protein family YqhG MC28_3521 0e88130c008d8d10615e4267aa415d9f 234 Pfam PF11079 Bacterial protein YqhG of unknown function 1 227 5.8E-113 T 14-10-2018 IPR024562 Uncharacterised protein family YqhG MC28_F288 bf27693b126f5534adde0bf9a1b1e261 325 Pfam PF13155 Toprim-like 209 296 1.3E-11 T 14-10-2018 MC28_F288 bf27693b126f5534adde0bf9a1b1e261 325 Pfam PF13154 Protein of unknown function (DUF3991) 121 188 4.7E-12 T 14-10-2018 IPR025054 Domain of unknown function DUF3991 MC28_F288 bf27693b126f5534adde0bf9a1b1e261 325 Gene3D G3DSA:3.40.1360.10 195 317 1.1E-5 T 14-10-2018 MC28_F288 bf27693b126f5534adde0bf9a1b1e261 325 SUPERFAMILY SSF57783 11 82 9.18E-7 T 14-10-2018 MC28_4378 6ff8f863255cb89ee90e23fad8668a07 162 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 34 143 3.2E-8 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like MC28_0836 bc90294990605f89078da675a7dbba0b 46 Pfam PF13040 Fur-regulated basic protein B 2 39 2.6E-14 T 14-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS MC28_0670 87abf74ce5995b83329fd3d8d641ae86 172 Pfam PF04167 Protein of unknown function (DUF402) 57 125 7.7E-19 T 14-10-2018 IPR007295 Domain of unknown function DUF402 MC28_0670 87abf74ce5995b83329fd3d8d641ae86 172 SUPERFAMILY SSF159234 1 164 5.36E-38 T 14-10-2018 IPR035930 FomD-like superfamily MC28_0670 87abf74ce5995b83329fd3d8d641ae86 172 Gene3D G3DSA:2.40.380.10 53 164 4.9E-10 T 14-10-2018 IPR035930 FomD-like superfamily MC28_4564 6e380de9a2a324f8c02e3d2e7e07270e 290 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 40 165 2.3E-47 T 14-10-2018 IPR014202 Sporulation stage II, protein R MC28_4564 6e380de9a2a324f8c02e3d2e7e07270e 290 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 6 171 4.5E-60 T 14-10-2018 IPR014202 Sporulation stage II, protein R MC28_2011 34becc84ca4773f91571d591ed813015 62 Pfam PF13209 Protein of unknown function (DUF4017) 1 60 8.4E-35 T 14-10-2018 IPR025090 Protein of unknown function DUF4017 MC28_0936 c75b2247eb5a373e5865a83042a213bb 140 Pfam PF10787 Uncharacterised protein from bacillus cereus group 2 131 1.4E-60 T 14-10-2018 IPR019723 Uncharacterised protein, YfmQ MC28_1474 4fe1e0a330949d79f9365e11cfc080dc 63 Pfam PF13067 Protein of unknown function (DUF3930) 13 62 6.5E-35 T 14-10-2018 IPR025172 Protein of unknown function DUF3930 MC28_1846 f299a27f3cae3db6c7fc9dc65745e70a 50 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 22 44 7.0E-12 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_1846 f299a27f3cae3db6c7fc9dc65745e70a 50 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 23 46 7.5E-12 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_2202 b64820888ee7aed9236c67c76708363e 387 Pfam PF01882 Protein of unknown function DUF58 213 292 6.5E-13 T 14-10-2018 IPR002881 Domain of unknown function DUF58 MC28_0532 778d2b797f98130a5ee998c659770750 239 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 63.124 T 14-10-2018 IPR022822 Lactate utilization protein A GO:0006089 MC28_0532 778d2b797f98130a5ee998c659770750 239 Pfam PF02754 Cysteine-rich domain 3 83 3.7E-18 T 14-10-2018 IPR004017 Cysteine-rich domain MC28_0532 778d2b797f98130a5ee998c659770750 239 Pfam PF02754 Cysteine-rich domain 132 215 2.1E-15 T 14-10-2018 IPR004017 Cysteine-rich domain MC28_1070 4a8cab7cae85b7f49ee3458dae6fe7d1 157 Pfam PF07301 Protein of unknown function (DUF1453) 9 150 1.1E-58 T 14-10-2018 IPR009916 Protein of unknown function DUF1453 MC28_1070 4a8cab7cae85b7f49ee3458dae6fe7d1 157 PIRSF PIRSF021441 2 157 2.3E-67 T 14-10-2018 IPR031306 CcdC protein MC28_C080 72b729d7fc8e0324a29ba84949173d82 279 Gene3D G3DSA:3.30.420.10 113 266 1.3E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 MC28_C080 72b729d7fc8e0324a29ba84949173d82 279 Pfam PF13276 HTH-like domain 42 95 6.8E-17 T 14-10-2018 IPR025948 HTH-like domain MC28_C080 72b729d7fc8e0324a29ba84949173d82 279 Pfam PF00665 Integrase core domain 118 231 1.1E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 MC28_C080 72b729d7fc8e0324a29ba84949173d82 279 SUPERFAMILY SSF53098 112 276 1.0E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_1656 c4f6ce1a8872fe356ccaa30b3ef5d834 89 Pfam PF13799 Domain of unknown function (DUF4183) 16 86 9.2E-18 T 14-10-2018 IPR025237 Domain of unknown function DUF4183 MC28_5364 d3e78d65900b35c349fa2706c5cee1b2 199 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 12 44 1.8E-12 T 14-10-2018 IPR023833 Signal peptide, camelysin MC28_5364 d3e78d65900b35c349fa2706c5cee1b2 199 Pfam PF12389 Camelysin metallo-endopeptidase 2 198 3.5E-89 T 14-10-2018 IPR022121 Peptidase M73, camelysin MC28_1962 ae7b734cb8ae4cac3f44f2419de64d0e 210 Pfam PF13315 Protein of unknown function (DUF4085) 3 201 3.7E-71 T 14-10-2018 IPR025144 Protein of unknown function DUF4085 MC28_3316 c5cacc394227600c76379551ef78917d 97 Pfam PF13065 Protein of unknown function (DUF3928) 1 95 5.0E-62 T 14-10-2018 IPR025170 Protein of unknown function DUF3928 MC28_2237 328e9d56ef69f1c92089efb8efc0bd59 309 SUPERFAMILY SSF103481 204 298 3.92E-15 T 14-10-2018 MC28_2237 328e9d56ef69f1c92089efb8efc0bd59 309 Pfam PF00892 EamA-like transporter family 13 144 1.3E-28 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_2237 328e9d56ef69f1c92089efb8efc0bd59 309 Pfam PF00892 EamA-like transporter family 159 293 8.0E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_2237 328e9d56ef69f1c92089efb8efc0bd59 309 SUPERFAMILY SSF103481 45 148 3.27E-17 T 14-10-2018 MC28_3558 b4e3a49bfcda2f99d45efb8ea44b5aca 192 SUPERFAMILY SSF100950 4 188 2.23E-49 T 14-10-2018 IPR037171 NagB/RpiA transferase-like MC28_3558 b4e3a49bfcda2f99d45efb8ea44b5aca 192 PIRSF PIRSF006806 1 185 1.9E-46 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase MC28_3558 b4e3a49bfcda2f99d45efb8ea44b5aca 192 Gene3D G3DSA:3.40.50.10420 1 192 2.2E-73 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily MC28_3558 b4e3a49bfcda2f99d45efb8ea44b5aca 192 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 182 4.7E-44 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase MC28_3558 b4e3a49bfcda2f99d45efb8ea44b5aca 192 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 182 9.3E-57 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase MC28_1991 d9eb48ec805dbc30eacc9b18b18df841 128 Pfam PF10990 Protein of unknown function (DUF2809) 32 115 1.9E-30 T 14-10-2018 IPR021257 Protein of unknown function DUF2809 MC28_5246 9ebd7a7774d9f2fb0984117779ab89bc 326 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 180 2.1E-29 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase MC28_3697 971d2c778efdc0fc0c92b6f1e3ffbaf1 48 Pfam PF10823 Protein of unknown function (DUF2568) 1 47 2.3E-10 T 14-10-2018 IPR021214 Protein of unknown function DUF2568 MC28_0355 1599ae039e3529e8a0d28a19f6912eab 197 Pfam PF09335 SNARE associated Golgi protein 43 161 5.5E-25 T 14-10-2018 IPR032816 SNARE associated Golgi protein MC28_C016 7928a4a91b9b5838e6c184de07f64876 174 SUPERFAMILY SSF46565 34 76 5.36E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily MC28_C016 7928a4a91b9b5838e6c184de07f64876 174 Gene3D G3DSA:1.10.287.110 14 98 6.6E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily MC28_0813 201da2edf88aa68d110a628cbb1398f7 67 Pfam PF13060 Protein of unknown function (DUF3921) 8 65 7.7E-43 T 14-10-2018 IPR025036 Protein of unknown function DUF3921 MC28_G027 132ec0825d9e6b18ca1da17ef94436f1 422 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 107 377 1.0E-22 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 MC28_G027 132ec0825d9e6b18ca1da17ef94436f1 422 SUPERFAMILY SSF51445 48 404 1.71E-50 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily MC28_G027 132ec0825d9e6b18ca1da17ef94436f1 422 Gene3D G3DSA:3.20.20.80 48 390 1.3E-50 T 14-10-2018 MC28_G027 132ec0825d9e6b18ca1da17ef94436f1 422 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 191 200 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 MC28_1146 a17530e521dcd1422ebe09bc66e33119 351 Gene3D G3DSA:3.20.20.30 7 351 3.5E-69 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_1146 a17530e521dcd1422ebe09bc66e33119 351 Pfam PF00296 Luciferase-like monooxygenase 27 308 7.4E-44 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MC28_1146 a17530e521dcd1422ebe09bc66e33119 351 SUPERFAMILY SSF51679 22 347 1.27E-66 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 MC28_D167 f8638afd009bbe22444ab499d4e4b76d 77 Pfam PF13610 DDE domain 40 61 2.3E-6 T 14-10-2018 IPR032874 DDE domain MC28_5077 0810669608b2e325cd0d55ac621c11bf 372 SUPERFAMILY SSF52540 213 295 1.09E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5077 0810669608b2e325cd0d55ac621c11bf 372 SUPERFAMILY SSF52540 31 175 3.53E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_5077 0810669608b2e325cd0d55ac621c11bf 372 Gene3D G3DSA:3.40.50.300 217 253 2.5E-5 T 14-10-2018 MC28_0986 fe71fe83e1cf9dde65cdb91c90a80d30 381 Pfam PF12698 ABC-2 family transporter protein 19 369 4.2E-43 T 14-10-2018 MC28_0986 fe71fe83e1cf9dde65cdb91c90a80d30 381 Gene3D G3DSA:3.40.1710.10 44 147 8.2E-7 T 14-10-2018 MC28_0986 fe71fe83e1cf9dde65cdb91c90a80d30 381 PRINTS PR00164 ABC-2 type transport system membrane protein signature 299 318 2.6E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 MC28_0986 fe71fe83e1cf9dde65cdb91c90a80d30 381 PRINTS PR00164 ABC-2 type transport system membrane protein signature 262 286 2.6E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 MC28_2815 74ec7b2e1bcfcc2de6a56a0e90498a66 225 Pfam PF04172 LrgB-like family 10 222 3.5E-70 T 14-10-2018 IPR007300 CidB/LrgB family MC28_4853 35c1cb08788d282d39edff19986059fe 239 Pfam PF02361 Cobalt transport protein 2 209 3.8E-51 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component MC28_3409 54524d27da6d9a0dfa8990519997268d 246 Pfam PF12146 Serine aminopeptidase, S33 39 215 2.9E-9 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 MC28_3409 54524d27da6d9a0dfa8990519997268d 246 Gene3D G3DSA:3.40.50.1820 3 232 4.6E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_3409 54524d27da6d9a0dfa8990519997268d 246 SUPERFAMILY SSF53474 6 232 1.18E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_G091 838785622988c1679286b65b8f1ad83b 43 Gene3D G3DSA:1.20.1260.120 8 43 3.1E-11 T 14-10-2018 MC28_G091 838785622988c1679286b65b8f1ad83b 43 SUPERFAMILY SSF158430 15 39 1.57E-6 T 14-10-2018 MC28_5223 8719bfd11206a7ab2a6972b40caed3bf 107 Pfam PF13108 Protein of unknown function (DUF3969) 3 105 2.8E-35 T 14-10-2018 IPR025083 Protein of unknown function DUF3969 MC28_2959 614bdd17cc141b03f5ab5895679b9c6a 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 288 1.6E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 MC28_1365 996863461006e66f925dfc058a56e7bf 317 Gene3D G3DSA:3.40.50.450 183 316 2.3E-8 T 14-10-2018 MC28_0087 2ba7d12b8174ba2bbc1f0657d07ec74d 201 Pfam PF09335 SNARE associated Golgi protein 29 154 5.3E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein MC28_0040 ec391e53ba95a3ab6066a4caa34bec0d 479 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 2 454 8.5E-143 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_0040 ec391e53ba95a3ab6066a4caa34bec0d 479 PIRSF PIRSF005690 2 470 3.5E-129 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 MC28_0898 2e7ea864d47a0c8ca105fd1558c03ab8 192 Pfam PF03963 Flagellar hook capping protein - N-terminal region 32 100 5.1E-17 T 14-10-2018 IPR005648 Flagellar hook capping protein MC28_D008 cde077f277ed76d2ac5050dcbf2232d6 153 ProDom PD295888 PLASMID MEMBRANE TRANSMEMBRANE PXO2-26/BXB0024/GBAA_PXO2_0024 49 153 5.0E-53 T 14-10-2018 IPR020334 Uncharacterised protein family, plasmid pXO2-26 MC28_3440 9dc8312694ea4012bc7d97a639b364a9 41 Pfam PF13033 Protein of unknown function (DUF3894) 1 39 7.6E-26 T 14-10-2018 IPR024993 Protein of unknown function DUF3894 MC28_1541 bc6b86063b04cf9e8ae852719c9a3589 123 Gene3D G3DSA:2.60.120.40 1 117 3.0E-9 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 MC28_1541 bc6b86063b04cf9e8ae852719c9a3589 123 SUPERFAMILY SSF49842 2 115 1.33E-17 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 MC28_3516 9745f37d1627598560b8f7ef74b7735d 67 Pfam PF13066 Protein of unknown function (DUF3929) 1 64 4.6E-49 T 14-10-2018 IPR025171 Protein of unknown function DUF3929 MC28_F027 7595d73ca71ec11f3fd278217cf2b108 199 Gene3D G3DSA:3.40.50.300 42 199 6.1E-6 T 14-10-2018 MC28_3728 0c276a65ebb323c0a71f7837fef07583 607 Pfam PF02687 FtsX-like permease family 53 147 2.3E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_3728 0c276a65ebb323c0a71f7837fef07583 607 PIRSF PIRSF018968 1 607 7.5E-111 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_F263 73b858776ea2df18eaeb446c6d8f8028 117 Pfam PF11756 Nitrous oxide-stimulated promoter 3 104 9.3E-37 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA MC28_F263 73b858776ea2df18eaeb446c6d8f8028 117 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 2 93 4.0E-37 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA MC28_B07 c6330eb8b23984f4346d4bb60ebe3425 136 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 11 134 1.8E-8 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component MC28_D195 f222d1a23cb2e48f36a15e69bf8ef8a4 174 ProDom PD306514 PLASMID PXO2-33/BXB0032/GBAA_PXO2_0032 1 174 1.0E-93 T 14-10-2018 IPR020402 Uncharacterised protein family, plasmid pXO2-33 MC28_0214 d84eaaf58e01b7891cfa0fd515307159 212 Pfam PF04892 VanZ like family 43 160 9.8E-22 T 14-10-2018 IPR006976 VanZ-like MC28_3425 e87a0fad9d4e37fe75dd6a1b228e7b0f 85 Pfam PF14164 YqzH-like protein 24 83 1.4E-22 T 14-10-2018 IPR025546 YqzH-like protein MC28_2586 408e74d68d2a2baebe8c7772a3e8f177 106 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 1.7E-23 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal MC28_2586 408e74d68d2a2baebe8c7772a3e8f177 106 Gene3D G3DSA:1.10.10.10 1 106 4.2E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily MC28_2586 408e74d68d2a2baebe8c7772a3e8f177 106 SUPERFAMILY SSF46785 5 99 2.39E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily MC28_4499 98006f5a44f627eb37979db04c9fdcd0 276 PIRSF PIRSF030175 2 276 2.0E-111 T 14-10-2018 IPR016948 Uncharacterised conserved protein UCP030175 MC28_4499 98006f5a44f627eb37979db04c9fdcd0 276 SUPERFAMILY SSF52266 96 273 3.83E-10 T 14-10-2018 MC28_4499 98006f5a44f627eb37979db04c9fdcd0 276 Gene3D G3DSA:3.40.50.1110 71 273 3.2E-12 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_4042 6459e68ed09ae88918aacd6008376105 433 Pfam PF03929 PepSY-associated TM region 12 376 1.0E-57 T 14-10-2018 IPR005625 PepSY-associated TM protein MC28_0824 07fcd97becd12445d5ae0b983a810c1b 84 Pfam PF13082 Protein of unknown function (DUF3931) 1 66 4.8E-50 T 14-10-2018 IPR025078 Protein of unknown function DUF3931 MC28_1824 7a2280b96f2ba1c7fcb5d2912548671b 794 Pfam PF13111 Protein of unknown function (DUF3962) 5 215 1.0E-92 T 14-10-2018 IPR025085 Domain of unknown function DUF3962 MC28_1824 7a2280b96f2ba1c7fcb5d2912548671b 794 Pfam PF13032 Domain of unknown function (DUF3893) 657 763 8.6E-21 T 14-10-2018 IPR024996 Domain of unknown function DUF3893 MC28_G156 de81b6da9ff5f4ac3b61d8410e397784 368 Pfam PF14286 DHHW protein 88 327 6.3E-42 T 14-10-2018 IPR025945 DHHW protein MC28_G156 de81b6da9ff5f4ac3b61d8410e397784 368 Pfam PF14286 DHHW protein 28 83 2.5E-8 T 14-10-2018 IPR025945 DHHW protein MC28_4974 d5c8a1df98d3e650db198175549d14bf 243 Gene3D G3DSA:3.40.30.10 1 209 1.5E-74 T 14-10-2018 MC28_4974 d5c8a1df98d3e650db198175549d14bf 243 SUPERFAMILY SSF52833 1 212 4.21E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily MC28_4974 d5c8a1df98d3e650db198175549d14bf 243 Pfam PF01323 DSBA-like thioredoxin domain 2 206 9.5E-44 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 MC28_3480 3188aced78138990200d763e07db3d0d 204 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 17 204 2.2E-72 T 14-10-2018 IPR014195 Sporulation stage III, protein AG MC28_4485 11a8a4846719bb6fd2ba445a4ed31adb 232 Pfam PF06930 Protein of unknown function (DUF1282) 20 213 1.6E-32 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 MC28_1620 4a13cd307ea04b15016670df7ba71e85 173 Pfam PF10517 Electron transfer DM13 68 170 1.4E-27 T 14-10-2018 IPR019545 DM13 domain MC28_4590 fb5b131a0fb7290c28e0f6121425a2d3 244 PIRSF PIRSF006648 1 243 3.1E-22 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 MC28_4590 fb5b131a0fb7290c28e0f6121425a2d3 244 Pfam PF12698 ABC-2 family transporter protein 50 236 1.8E-16 T 14-10-2018 MC28_1882 878609d33d1b1b0848909c2a7efb6161 138 SUPERFAMILY SSF55729 4 138 1.61E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_1882 878609d33d1b1b0848909c2a7efb6161 138 Pfam PF00583 Acetyltransferase (GNAT) family 26 116 6.1E-15 T 14-10-2018 IPR000182 GNAT domain MC28_1882 878609d33d1b1b0848909c2a7efb6161 138 Gene3D G3DSA:3.40.630.30 35 138 1.5E-29 T 14-10-2018 MC28_G168 c1db7c107a78cbc55686f2678ddfaf29 242 Pfam PF01609 Transposase DDE domain 55 151 2.4E-22 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_G168 c1db7c107a78cbc55686f2678ddfaf29 242 SUPERFAMILY SSF53098 6 233 1.21E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_0317 e637b7a271802a5d03d20e42230ebaa4 66 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 1 52 1.7E-16 T 14-10-2018 IPR018656 Domain of unknown function DUF2087 MC28_3383 4c07c9605c81fafa9264cf6510bd2691 81 Pfam PF14004 Protein of unknown function (DUF4227) 11 81 6.0E-29 T 14-10-2018 IPR025321 Protein of unknown function DUF4227 MC28_4326 6c581cc796950ecc24719a24f783357b 307 TIGRFAM TIGR03934 TQXA_dom: TQXA domain 87 123 2.0E-11 T 14-10-2018 IPR023849 Uncharacterised domain CHP03934, TQXA MC28_G170 19492d1fc6be4f9767811c1e53a60b21 306 Pfam PF02517 CAAX protease self-immunity 141 248 1.6E-15 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_5244 1c0d52080aa13fe4fac42d7e6589fb18 59 Pfam PF08176 Small acid-soluble spore protein K family 8 55 1.0E-24 T 14-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 MC28_5244 1c0d52080aa13fe4fac42d7e6589fb18 59 Hamap MF_01504 Small, acid-soluble spore protein K [sspK]. 8 57 16.381 T 14-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 MC28_5244 1c0d52080aa13fe4fac42d7e6589fb18 59 TIGRFAM TIGR03091 SASP_sspK: small, acid-soluble spore protein K 24 55 2.7E-22 T 14-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 MC28_C071 04c5051d1df2ac29581d8daf80179354 630 Pfam PF13255 Protein of unknown function (DUF4046) 9 91 3.2E-7 T 14-10-2018 IPR025119 Domain of unknown function DUF4046 MC28_3155 718c9e1e44f560d3c6dac97cdc495e1a 77 Pfam PF10779 Haemolysin XhlA 9 71 7.4E-9 T 14-10-2018 IPR019715 Haemolysin XhlA MC28_B22 c46c4cbfaa05755f04d8182dcd34a67e 155 Pfam PF05105 Bacteriophage holin family 36 134 2.3E-10 T 14-10-2018 IPR006480 Bacteriophage holin family MC28_5162 90795aeb482b7a930456bb7038157462 116 Pfam PF12728 Helix-turn-helix domain 64 113 1.0E-9 T 14-10-2018 MC28_2541 b5978ee57ffc122989440ccf6f36545c 439 Pfam PF03222 Tryptophan/tyrosine permease family 40 406 1.6E-17 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 MC28_G138 26423ae9607ad0400bb07bcf20d0aabe 610 Pfam PF02687 FtsX-like permease family 84 177 9.1E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_G138 26423ae9607ad0400bb07bcf20d0aabe 610 PIRSF PIRSF018968 1 403 1.8E-39 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_G138 26423ae9607ad0400bb07bcf20d0aabe 610 PIRSF PIRSF018968 404 608 7.2E-23 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_4540 ea43e3ea834c118c5d68eeaec96ff8bc 261 Pfam PF06161 Protein of unknown function (DUF975) 4 257 4.5E-31 T 14-10-2018 IPR010380 Protein of unknown function DUF975 MC28_G047 750f82f4a0533be930b7ecc2e63d12e5 194 SUPERFAMILY SSF49842 54 186 4.14E-19 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 MC28_G047 750f82f4a0533be930b7ecc2e63d12e5 194 Gene3D G3DSA:2.60.120.40 51 189 5.3E-11 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 MC28_1272 d4e176c4df768a16b1dcfdd2944a3c1b 211 Pfam PF13787 Protein of unknown function with HXXEE motif 41 151 3.1E-14 T 14-10-2018 IPR025671 Protein of unknown function with HXXEE motif MC28_0011 c583380164329378b4fd00921cc2eb78 67 Gene3D G3DSA:3.10.20.30 1 67 5.5E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily MC28_0011 c583380164329378b4fd00921cc2eb78 67 SUPERFAMILY SSF54285 3 66 1.64E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MC28_0011 c583380164329378b4fd00921cc2eb78 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 4.5E-23 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis MC28_0011 c583380164329378b4fd00921cc2eb78 67 Pfam PF02597 ThiS family 4 67 4.2E-14 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 MC28_5197 a9e4232a47974409deefaeb340c96159 120 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 17 118 1.7E-14 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor MC28_5197 a9e4232a47974409deefaeb340c96159 120 Pfam PF05521 Phage head-tail joining protein 19 115 1.7E-20 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor MC28_5197 a9e4232a47974409deefaeb340c96159 120 Gene3D G3DSA:2.40.10.270 13 120 7.6E-24 T 14-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily MC28_5300 0cbdfc5b7b488aec48423bf3ce84c294 235 Pfam PF00072 Response regulator receiver domain 4 115 4.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_5300 0cbdfc5b7b488aec48423bf3ce84c294 235 PIRSF PIRSF006171 1 229 2.0E-83 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 MC28_5300 0cbdfc5b7b488aec48423bf3ce84c294 235 SUPERFAMILY SSF52172 1 136 3.42E-35 T 14-10-2018 IPR011006 CheY-like superfamily MC28_5300 0cbdfc5b7b488aec48423bf3ce84c294 235 Gene3D G3DSA:3.40.50.2300 1 138 1.5E-32 T 14-10-2018 MC28_5300 0cbdfc5b7b488aec48423bf3ce84c294 235 SMART SM00448 2 115 8.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 MC28_3883 ce03a4f05eaa1c5688b9710e32c8a3cb 137 Pfam PF14034 Sporulation protein YtrH 37 134 5.3E-37 T 14-10-2018 IPR025689 Sporulation protein YtrH MC28_1542 0ff4573d4261adcf2732dbe65053c9c0 140 Gene3D G3DSA:2.60.120.40 3 133 7.6E-9 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 MC28_1542 0ff4573d4261adcf2732dbe65053c9c0 140 SUPERFAMILY SSF49842 6 114 1.66E-15 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 MC28_F148 3506e4e5ceb8805c6ffce4e31b50f29e 288 Pfam PF02517 CAAX protease self-immunity 121 226 5.5E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_4128 c7b15ef505126eed8de0fcf826635a4b 595 Pfam PF02687 FtsX-like permease family 28 116 6.4E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_4128 c7b15ef505126eed8de0fcf826635a4b 595 PIRSF PIRSF018968 1 593 2.9E-106 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_0287 52439b039e497fc5daf55c252295c616 158 Pfam PF03703 Bacterial PH domain 72 146 9.0E-15 T 14-10-2018 IPR005182 Domain of unknown function DUF304 MC28_0400 2f982a2e5e07131eaeb9494e362efafd 111 Pfam PF13038 Domain of unknown function (DUF3899) 20 107 9.1E-22 T 14-10-2018 IPR025007 Domain of unknown function DUF3899 MC28_1222 2e5854c753b5e433f3cfe622d9187629 626 Pfam PF02687 FtsX-like permease family 84 178 7.6E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_1222 2e5854c753b5e433f3cfe622d9187629 626 PIRSF PIRSF018968 1 623 9.2E-135 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_1893 a8e82769048853b4b1a099eab33d9572 135 Pfam PF09350 Domain of unknown function (DUF1992) 34 95 5.2E-17 T 14-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain MC28_4267 80cd7c5bd9bb79109cbd9095a91dee22 61 Gene3D G3DSA:1.20.1260.10 8 60 4.9E-5 T 14-10-2018 IPR012347 Ferritin-like MC28_4400 d3ca067a198f865ebdfe3555fc8a2bf9 149 Pfam PF14101 Domain of unknown function (DUF4275) 1 145 2.9E-67 T 14-10-2018 IPR025454 Protein of unknown function DUF4275 MC28_E181 520e1fde7fea2b5b658321630aa4fd75 486 Gene3D G3DSA:3.40.50.300 265 486 6.7E-37 T 14-10-2018 MC28_E181 520e1fde7fea2b5b658321630aa4fd75 486 Gene3D G3DSA:3.40.50.300 60 217 2.3E-13 T 14-10-2018 MC28_E181 520e1fde7fea2b5b658321630aa4fd75 486 SUPERFAMILY SSF52540 52 466 2.76E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase MC28_0746 1c0cb88d1715350fcf8827414541828d 249 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 21 230 2.0E-76 T 14-10-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 MC28_2920 af67d283c9585cb9af3ee4936d49074b 399 Pfam PF10720 Protein of unknown function (DUF2515) 58 388 8.0E-127 T 14-10-2018 IPR019658 Protein of unknown function DUF2515 MC28_D014 0ba5cc3fa2a555dcd0392f24d6fe5f96 83 ProDom PD276036 PLASMID PXO2-19/BXB0018/GBAA_PXO2_0018 1 83 3.0E-42 T 14-10-2018 IPR020259 Uncharacterised protein family, plasmid pXO2-19 MC28_E143 7c58e9b92363547d20c0bcd8becfffe8 288 SUPERFAMILY SSF56563 24 232 4.32E-5 T 14-10-2018 MC28_0856 7838a0fc8e891ba50ba3585796c23f7b 92 Pfam PF13143 Protein of unknown function (DUF3986) 3 89 2.4E-25 T 14-10-2018 IPR025047 Protein of unknown function DUF3986 MC28_3350 2cd15e53055b14d3af0fa4f450a97c56 247 Gene3D G3DSA:1.10.10.580 179 242 7.3E-6 T 14-10-2018 IPR023093 ScpA-like, C-terminal MC28_3350 2cd15e53055b14d3af0fa4f450a97c56 247 Hamap MF_01805 Segregation and condensation protein A [scpA]. 3 244 27.163 T 14-10-2018 IPR003768 Segregation and condensation protein A MC28_3350 2cd15e53055b14d3af0fa4f450a97c56 247 Pfam PF02616 Segregation and condensation protein ScpA 20 241 4.6E-57 T 14-10-2018 IPR003768 Segregation and condensation protein A MC28_G158 cd8fdf3e7d5614b7520ea40918401adc 229 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 57 218 5.0E-17 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain MC28_G158 cd8fdf3e7d5614b7520ea40918401adc 229 Gene3D G3DSA:3.40.50.1110 22 226 3.6E-30 T 14-10-2018 IPR036514 SGNH hydrolase superfamily MC28_G158 cd8fdf3e7d5614b7520ea40918401adc 229 SUPERFAMILY SSF52266 34 228 2.17E-27 T 14-10-2018 MC28_F135 2cb76ec951b9cf1a36ba5e9aa0f47a61 369 Pfam PF01757 Acyltransferase family 6 346 2.4E-38 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 MC28_4656 467d3996b6421b536a69adbd73fc1f7c 210 Pfam PF03458 UPF0126 domain 6 79 8.6E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 MC28_4656 467d3996b6421b536a69adbd73fc1f7c 210 Pfam PF03458 UPF0126 domain 92 166 7.3E-21 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 MC28_4127 8a12516b740760bc6a91fb0ddff501ad 608 PIRSF PIRSF018968 3 605 1.1E-105 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_4127 8a12516b740760bc6a91fb0ddff501ad 608 Pfam PF02687 FtsX-like permease family 36 120 4.8E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_2069 ca2dd3f7f45b49b6e64d6ffc6e42701f 236 Pfam PF04519 Polymer-forming cytoskeletal 20 81 3.7E-8 T 14-10-2018 IPR007607 Bactofilin A/B MC28_2069 ca2dd3f7f45b49b6e64d6ffc6e42701f 236 Pfam PF04519 Polymer-forming cytoskeletal 45 120 1.9E-11 T 14-10-2018 IPR007607 Bactofilin A/B MC28_4226 36fd3cddd8c67edd56b205a108286a87 146 Gene3D G3DSA:1.20.120.580 1 144 3.9E-54 T 14-10-2018 IPR037038 Bsu32300-like superfamily MC28_4226 36fd3cddd8c67edd56b205a108286a87 146 Pfam PF01934 Protein of unknown function DUF86 11 126 4.8E-21 T 14-10-2018 IPR008201 Protein of unknown function DUF86 MC28_0692 6b946e4ec4be52f1233e792561e1021f 170 SUPERFAMILY SSF49842 48 170 1.24E-5 T 14-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 MC28_1194 2a406ff60eb8e378160ed80eea695dd0 55 Pfam PF13069 Protein of unknown function (DUF3933) 1 53 2.0E-41 T 14-10-2018 IPR025174 Protein of unknown function DUF3933 MC28_1584 eafdcd6cb850be2751e2c6ded322eb87 255 Pfam PF13030 Protein of unknown function (DUF3891) 1 229 1.2E-64 T 14-10-2018 IPR024992 Protein of unknown function DUF3891 MC28_1185 7243b471136ec768f247bea255daaaef 616 Pfam PF04183 IucA / IucC family 153 394 9.1E-73 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 MC28_1185 7243b471136ec768f247bea255daaaef 616 Gene3D G3DSA:1.10.510.40 384 604 1.5E-54 T 14-10-2018 MC28_1185 7243b471136ec768f247bea255daaaef 616 Pfam PF06276 Ferric iron reductase FhuF-like transporter 415 581 1.5E-30 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain MC28_1185 7243b471136ec768f247bea255daaaef 616 Gene3D G3DSA:1.10.274.90 6 142 2.3E-5 T 14-10-2018 MC28_4905 c78409e37eac47b100ae44902f5c7d47 52 Pfam PF14142 YrzO-like protein 1 46 3.5E-31 T 14-10-2018 IPR025417 YrzO-like protein MC28_C090 7738784f0285d41e3d51789afd804e49 83 Pfam PF14166 YueH-like protein 16 76 6.4E-7 T 14-10-2018 IPR020260 Uncharacterised protein family YueH MC28_2469 36cd096ada142add886c7f5a6eab9aa8 552 Pfam PF16949 Putative ATP-binding cassette 68 448 1.7E-14 T 14-10-2018 IPR031599 Putative ATP-binding cassette MC28_2124 78dd5dea827a2947e946e2f41676667c 237 Pfam PF08713 DNA alkylation repair enzyme 18 201 1.4E-22 T 14-10-2018 IPR014825 DNA alkylation repair enzyme MC28_2124 78dd5dea827a2947e946e2f41676667c 237 SUPERFAMILY SSF48371 13 234 6.62E-60 T 14-10-2018 IPR016024 Armadillo-type fold MC28_4428 69e6bfdd5270e546e1e6cc066a78304e 429 Gene3D G3DSA:3.90.1720.10 230 423 3.5E-37 T 14-10-2018 MC28_4428 69e6bfdd5270e546e1e6cc066a78304e 429 Pfam PF00877 NlpC/P60 family 328 426 9.9E-22 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain MC28_4428 69e6bfdd5270e546e1e6cc066a78304e 429 SUPERFAMILY SSF54001 312 429 3.53E-30 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily MC28_2170 fd46c014f9fe2f95ae8a7ed42ad05c9b 130 Gene3D G3DSA:3.10.180.10 2 121 1.2E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2170 fd46c014f9fe2f95ae8a7ed42ad05c9b 130 SUPERFAMILY SSF54593 1 124 3.62E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_2170 fd46c014f9fe2f95ae8a7ed42ad05c9b 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 119 2.1E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MC28_F265 3696454657fcce740355e748b47a666d 286 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 7 271 6.9E-106 T 14-10-2018 IPR013418 CRISPR-associated protein Csd2 MC28_F265 3696454657fcce740355e748b47a666d 286 Pfam PF05107 CRISPR-associated protein Cas7 7 272 1.3E-81 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C MC28_F265 3696454657fcce740355e748b47a666d 286 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 4 270 1.1E-75 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C MC28_2843 d8884ec5281035f4de25fc3f69b98b8c 323 SUPERFAMILY SSF53795 117 182 3.36E-15 T 14-10-2018 MC28_2843 d8884ec5281035f4de25fc3f69b98b8c 323 Gene3D G3DSA:3.40.50.300 115 201 3.1E-11 T 14-10-2018 MC28_0384 46afe1348e58287d09c1ab4dcc9e1cc9 56 Pfam PF13081 Domain of unknown function (DUF3941) 31 54 2.2E-14 T 14-10-2018 IPR025077 Protein of unknown function DUF3941 MC28_1131 844179333f7ac8eba62a6a5f5d7f935e 43 Pfam PF14150 YesK-like protein 1 34 8.2E-6 T 14-10-2018 IPR025434 YesK-like protein MC28_1265 2c431f7f256db57cc043ac1ba10e3952 153 Pfam PF07875 Coat F domain 86 141 1.5E-7 T 14-10-2018 IPR012851 Spore coat protein CotF-like MC28_2366 f754aad8f4337c504138ed570741c02e 381 SUPERFAMILY SSF55729 192 354 2.05E-5 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_3586 5781c7e8e058e74a95e89b60b146293b 79 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 63 1.3E-5 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 MC28_G294 b14b19e4b693d7f4535184104f64a7de 475 Pfam PF02687 FtsX-like permease family 341 467 1.1E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_3414 1478be0291bfba5db754090a2b481363 457 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 448 2.7E-130 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 MC28_3414 1478be0291bfba5db754090a2b481363 457 Pfam PF03553 Na+/H+ antiporter family 154 444 1.5E-57 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 MC28_3537 3b9dc79b3fc4df48a0a2b975f527da54 94 Pfam PF11117 Protein of unknown function (DUF2626) 15 87 1.4E-37 T 14-10-2018 IPR020254 Protein of unknown function DUF2626 MC28_3537 3b9dc79b3fc4df48a0a2b975f527da54 94 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 15 94 1.0E-38 T 14-10-2018 IPR020254 Protein of unknown function DUF2626 MC28_D129 385bc08ef7f6a8806725d0ab0088fc94 92 ProDom PD280341 PLASMID PXO2-06/BXB0005/GBAA_PXO2_0005 1 78 1.0E-32 T 14-10-2018 IPR020265 Protein of unknown function DUF5513 MC28_D129 385bc08ef7f6a8806725d0ab0088fc94 92 Pfam PF17632 Family of unknown function (DUF5513) 1 79 3.1E-26 T 14-10-2018 IPR020265 Protein of unknown function DUF5513 MC28_1130 4f71bb6bc19605227fc018c7dfd141a6 339 Pfam PF01594 AI-2E family transporter 16 328 7.3E-45 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like MC28_2733 d23aa83d639c3afffb92e9ff8a8de66a 130 ProDom PD710533 YODI TRANSMEMBRANE MEMBRANE 7 48 8.0E-17 T 14-10-2018 MC28_3358 5f753409ee53bb1277726717dbf58b30 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 2.7E-54 T 14-10-2018 IPR014204 Sporulation stage V, protein AE MC28_3358 5f753409ee53bb1277726717dbf58b30 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 111 5.3E-41 T 14-10-2018 IPR005562 SpoVA MC28_D029 ad1b75b2673c40fa411f312cb2ae31e2 202 ProDom PD310412 PLASMID PXO2-07/BXB0006/GBAA_PXO2_0006 1 202 1.0E-102 T 14-10-2018 IPR020522 Uncharacterised protein family, plasmid pXO2-07 MC28_C010 f8999cc266f3467a2e33901662583863 185 Pfam PF13411 MerR HTH family regulatory protein 12 78 4.5E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MC28_C010 f8999cc266f3467a2e33901662583863 185 Gene3D G3DSA:1.10.1660.10 12 75 8.5E-9 T 14-10-2018 MC28_G253 208df1f8dd6ceadd68ac1c4a0fd04c7d 448 Pfam PF02447 GntP family permease 1 446 3.8E-179 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_G253 208df1f8dd6ceadd68ac1c4a0fd04c7d 448 PIRSF PIRSF002746 1 448 6.1E-180 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_G253 208df1f8dd6ceadd68ac1c4a0fd04c7d 448 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 448 7.3E-198 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 MC28_4391 02587c328f18a6037ef8523eb0cca48f 268 Pfam PF04018 Domain of unknown function (DUF368) 12 239 3.5E-54 T 14-10-2018 IPR007163 Protein of unknown function DUF368 MC28_4005 fbc76e561981a1d7f894c4bf4fa65b04 950 TIGRFAM TIGR03720 exospor_lead: exosporium leader peptide 16 35 2.4E-7 T 14-10-2018 IPR021201 Leader peptide, exosporium MC28_4005 fbc76e561981a1d7f894c4bf4fa65b04 950 Pfam PF01391 Collagen triple helix repeat (20 copies) 84 142 8.8E-9 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_4005 fbc76e561981a1d7f894c4bf4fa65b04 950 Pfam PF01391 Collagen triple helix repeat (20 copies) 754 812 2.0E-6 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_4005 fbc76e561981a1d7f894c4bf4fa65b04 950 Pfam PF01391 Collagen triple helix repeat (20 copies) 652 710 4.2E-7 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_4005 fbc76e561981a1d7f894c4bf4fa65b04 950 Pfam PF01391 Collagen triple helix repeat (20 copies) 559 616 8.1E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_4005 fbc76e561981a1d7f894c4bf4fa65b04 950 Pfam PF01391 Collagen triple helix repeat (20 copies) 38 93 4.9E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_4005 fbc76e561981a1d7f894c4bf4fa65b04 950 Pfam PF01391 Collagen triple helix repeat (20 copies) 129 187 3.7E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_4005 fbc76e561981a1d7f894c4bf4fa65b04 950 Pfam PF01391 Collagen triple helix repeat (20 copies) 709 766 2.0E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_4005 fbc76e561981a1d7f894c4bf4fa65b04 950 Pfam PF01391 Collagen triple helix repeat (20 copies) 613 670 1.2E-7 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_2754 2356c97563455963f85a50964f2b2c49 96 PIRSF PIRSF034852 1 96 5.3E-40 T 14-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 MC28_2754 2356c97563455963f85a50964f2b2c49 96 SUPERFAMILY SSF89360 1 79 3.01E-11 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 MC28_2754 2356c97563455963f85a50964f2b2c49 96 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 81 2.3E-7 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 MC28_1599 46836da744bd07db9206197e440df45b 245 Pfam PF02535 ZIP Zinc transporter 99 237 2.1E-14 T 14-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 MC28_D109 1fba1d6662ae98a5fc6b8186c182a1e9 127 ProDom PD295888 PLASMID MEMBRANE TRANSMEMBRANE PXO2-26/BXB0024/GBAA_PXO2_0024 9 127 1.0E-51 T 14-10-2018 IPR020334 Uncharacterised protein family, plasmid pXO2-26 MC28_F228 d27876b6457d15e757499324b4e0c914 662 PIRSF PIRSF018968 1 662 1.6E-68 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 MC28_F228 d27876b6457d15e757499324b4e0c914 662 Pfam PF02687 FtsX-like permease family 88 184 1.1E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_0760 a13aa21fb51ae00f95f3ab41bbdc6172 227 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 15 212 5.8E-41 T 14-10-2018 IPR010178 Integral membrane protein 1906 MC28_0760 a13aa21fb51ae00f95f3ab41bbdc6172 227 Pfam PF07314 Protein of unknown function (DUF1461) 17 189 2.3E-44 T 14-10-2018 IPR010178 Integral membrane protein 1906 MC28_4677 4935007f3ec96633dc1464629adb0efb 520 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 10 491 1.0E-146 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 MC28_2379 450086813e9b7b133a22b2b53752eacc 365 Pfam PF02687 FtsX-like permease family 272 355 3.6E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_1675 a5f9606b3175a1c82dc3f41351b29918 109 Pfam PF06803 Protein of unknown function (DUF1232) 41 78 1.1E-6 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 MC28_1675 a5f9606b3175a1c82dc3f41351b29918 109 PIRSF PIRSF031804 1 108 3.7E-35 T 14-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 MC28_2175 3bfae5fc1899dee32052892e4f803aac 104 SUPERFAMILY SSF109854 13 99 6.23E-11 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_2175 3bfae5fc1899dee32052892e4f803aac 104 Gene3D G3DSA:1.20.120.450 7 95 1.5E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes MC28_0363 86fca945998fdd3413018e2ab643d5cb 204 Pfam PF10737 Spore germination protein GerPC 23 198 8.2E-61 T 14-10-2018 IPR019673 Spore germination protein GerPC MC28_1376 491a0d48c2e118275823e3ff6d21d71c 237 Pfam PF12811 Bax inhibitor 1 like 7 234 1.4E-68 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 MC28_1376 491a0d48c2e118275823e3ff6d21d71c 237 PIRSF PIRSF009160 1 237 6.9E-86 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 MC28_1719 85a01d4bcdd14c5926d7fa61383f5376 347 Pfam PF02661 Fic/DOC family 109 215 1.0E-13 T 14-10-2018 IPR003812 Fido domain MC28_1719 85a01d4bcdd14c5926d7fa61383f5376 347 SUPERFAMILY SSF140931 93 285 9.81E-27 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_1719 85a01d4bcdd14c5926d7fa61383f5376 347 Gene3D G3DSA:1.10.3290.10 20 288 5.4E-35 T 14-10-2018 IPR036597 Fido-like domain superfamily MC28_3302 9a6fed327bded1d4fc8aecd0cf006cd5 433 SUPERFAMILY SSF160964 128 185 1.06E-9 T 14-10-2018 MC28_3302 9a6fed327bded1d4fc8aecd0cf006cd5 433 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 215 419 1.4E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 MC28_3302 9a6fed327bded1d4fc8aecd0cf006cd5 433 Gene3D G3DSA:1.10.3720.10 176 433 3.3E-68 T 14-10-2018 IPR035906 MetI-like superfamily MC28_3302 9a6fed327bded1d4fc8aecd0cf006cd5 433 SUPERFAMILY SSF161098 180 417 5.36E-57 T 14-10-2018 IPR035906 MetI-like superfamily MC28_D175 3f3765b01028d6395b572cb08d74dfa2 251 Pfam PF01391 Collagen triple helix repeat (20 copies) 59 104 3.2E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat MC28_G097 01ab4f582fbbde57d24eed7bbd654324 309 Gene3D G3DSA:3.60.60.10 1 309 4.6E-107 T 14-10-2018 MC28_G097 01ab4f582fbbde57d24eed7bbd654324 309 SUPERFAMILY SSF56235 1 309 2.08E-104 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal MC28_G097 01ab4f582fbbde57d24eed7bbd654324 309 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 1 297 7.5E-103 T 14-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal MC28_1582 66e7a367c6ef9d7cdb4095a0ab882e47 180 SUPERFAMILY SSF64288 20 173 2.51E-26 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_1582 66e7a367c6ef9d7cdb4095a0ab882e47 180 Gene3D G3DSA:3.40.1410.10 14 177 1.7E-23 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MC28_0671 106848ba03fd51c1462465d422b934a9 458 Pfam PF03553 Na+/H+ antiporter family 92 230 3.6E-13 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 MC28_0671 106848ba03fd51c1462465d422b934a9 458 Pfam PF03553 Na+/H+ antiporter family 259 441 4.7E-13 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 MC28_2442 eee04e2411b627ebe8a579d01a27eafd 129 Pfam PF04434 SWIM zinc finger 61 82 8.8E-5 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 MC28_G259 396c58f5ac9f647eead39c4914671e75 368 Gene3D G3DSA:3.10.450.540 252 367 6.1E-18 T 14-10-2018 MC28_G259 396c58f5ac9f647eead39c4914671e75 368 Pfam PF12642 Conjugative transposon protein TcpC 111 353 5.0E-48 T 14-10-2018 IPR024735 Conjugative transposon protein TcpC MC28_D111 a277b78f7d94411ce4ab073e80028f98 277 ProDom PD304634 PLASMID TRANSMEMBRANE PXO2-23/BXB0022/GBAA_PXO2_0022 MEMBRANE 16 276 2.0E-117 T 14-10-2018 IPR020397 Uncharacterised protein family, plasmid pXO2-23 MC28_4873 c92652549805c4a6d0d49663c1dca060 188 Pfam PF14066 Protein of unknown function (DUF4256) 16 188 1.1E-91 T 14-10-2018 IPR025352 Protein of unknown function DUF4256 MC28_4375 1ceed68ea1b69fe479ce84696e9e2bc8 485 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 131 273 5.0E-6 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like MC28_2923 806f9d79f5e2b31f648c9b4f38c4a9db 223 Pfam PF04172 LrgB-like family 7 217 4.8E-61 T 14-10-2018 IPR007300 CidB/LrgB family MC28_2250 2e2eb2cd017abaffdfbb72c56cd8957d 339 Pfam PF01925 Sulfite exporter TauE/SafE 47 283 2.7E-39 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 MC28_G246 ddf9b13b567d86694dede8a7ada21625 516 Pfam PF13814 Replication-relaxation 33 273 9.6E-6 T 14-10-2018 IPR025855 Plasmid replication-relaxation MC28_2410 c0b336e1c37d3ea3a21fa24059f2d4f5 101 Pfam PF06013 Proteins of 100 residues with WXG 13 87 2.0E-10 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like MC28_4727 83a1ef6f79c6385d14b33f20badade4c 333 Pfam PF14175 YaaC-like Protein 10 320 2.9E-112 T 14-10-2018 IPR026988 YaaC-like protein MC28_4089 229d8950c9de8e90af25ae69d6807c13 168 Pfam PF13785 Domain of unknown function (DUF4178) 28 158 2.8E-26 T 14-10-2018 IPR025235 Domain of unknown function DUF4178 MC28_3274 f2f10bc7b0d2ce1df31c0b30d9d0e703 172 Pfam PF04308 Ribonuclease H-like 20 172 2.5E-48 T 14-10-2018 IPR007405 Bacteriophage KVP40, Orf299 MC28_3992 3ad3ccdb3ddd1f0def9a46c7841ff2e1 75 Pfam PF13119 Domain of unknown function (DUF3973) 1 40 1.7E-29 T 14-10-2018 IPR025003 Domain of unknown function DUF3973 MC28_4285 31359120bb3009bf5d2dc68d6fcadb80 271 SUPERFAMILY SSF47473 147 234 9.18E-6 T 14-10-2018 IPR011992 EF-hand domain pair MC28_G296 6ba1579ae0451608fe2614f56fe4ddc8 155 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 4 154 3.2E-45 T 14-10-2018 IPR014243 Transcription factor, RsfA MC28_3309 846fea0384a288a8fc0bf232f0c6a0f9 151 Pfam PF06271 RDD family 9 144 3.2E-25 T 14-10-2018 IPR010432 RDD MC28_2857 52987aef130c9950761b64b97a4bbc4e 353 Pfam PF14897 EpsG family 37 341 1.1E-54 T 14-10-2018 MC28_2235 334a9afe718da5dbf7c166454fc6d95d 107 Pfam PF13140 Domain of unknown function (DUF3980) 21 105 6.0E-32 T 14-10-2018 IPR025044 Domain of unknown function DUF3980 MC28_G401 88f57e5384ad52dcb3fbaea9fac789bb 53 Pfam PF14657 Arm DNA-binding domain 5 38 3.4E-9 T 14-10-2018 IPR028259 AP2-like integrase, N-terminal domain MC28_G323 29e3b5d28a18cebfec582f3a1059deef 134 Pfam PF11518 Protein of unknown function (DUF3221) 45 127 3.4E-6 T 14-10-2018 IPR021598 Protein of unknown function DUF3221 MC28_1857 5a580bce9648c628f1200d21f6af91e2 168 Pfam PF11385 Protein of unknown function (DUF3189) 3 150 5.1E-50 T 14-10-2018 IPR021525 Protein of unknown function DUF3189 MC28_1075 165146dd03ed0a2432afd514ec645ea6 242 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 30 236 2.1E-28 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain MC28_2222 93d3b8fef995b33586acd5a3ead7eeae 91 TIGRFAM TIGR04197 T7SS_SACOL2603: type VII secretion effector, TIGR04197 family 4 90 3.4E-22 T 14-10-2018 IPR021477 Type VII secretion effector, SACOL2603 family MC28_3289 6746d86f14b296abba3cfc4074546fc1 77 Pfam PF04688 SPP1 phage holin 2 74 1.9E-18 T 14-10-2018 IPR006479 Holin MC28_1855 838e736f760e1a40e45f0b0960bb1a97 185 Pfam PF04892 VanZ like family 18 158 2.9E-26 T 14-10-2018 IPR006976 VanZ-like MC28_5270 593e113e368cb9db790dcc10b4739dfa 295 Pfam PF12671 Putative amidase domain 136 289 5.6E-37 T 14-10-2018 IPR024301 Putative amidase domain MC28_0389 f63624d9b59a1036e70b460c0edff35b 61 Pfam PF14168 YjzC-like protein 3 57 1.5E-27 T 14-10-2018 IPR025549 YjzC-like protein MC28_0336 0b58ab05596fb6e3c8a13ba0c35b751e 135 Gene3D G3DSA:3.10.180.10 16 135 1.4E-10 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0336 0b58ab05596fb6e3c8a13ba0c35b751e 135 SUPERFAMILY SSF54593 13 133 8.03E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MC28_0467 63fbd7529709a2011e3f6ca1aa9807e9 220 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 1 205 7.1E-68 T 14-10-2018 IPR019268 Protein of unknown function DUF2278 MC28_4347 e4528dc6e728b48fea62761d75f8f1a5 185 Gene3D G3DSA:3.40.50.850 1 185 1.1E-48 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_4347 e4528dc6e728b48fea62761d75f8f1a5 185 Pfam PF00857 Isochorismatase family 4 148 1.1E-39 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 MC28_4347 e4528dc6e728b48fea62761d75f8f1a5 185 SUPERFAMILY SSF52499 2 181 8.9E-50 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 MC28_1168 97f4d821c212accf30c95aa073e4a388 102 Pfam PF13630 SdpI/YhfL protein family 21 87 6.3E-15 T 14-10-2018 IPR025962 SdpI/YhfL protein family MC28_1004 40c44a6e7d554181a4b33d8472125311 541 Pfam PF14158 YndJ-like protein 28 279 2.4E-83 T 14-10-2018 IPR025450 YndJ-like protein MC28_3590 c4911bf67e8c4a8f6f3229b5b40cdc25 47 Pfam PF14006 YqzL-like protein 3 46 8.7E-20 T 14-10-2018 IPR025617 YqzL-like protein MC28_4980 2b9e83dcdb08e0519fbbaaf4db5b0953 187 Gene3D G3DSA:3.40.50.150 42 155 1.7E-7 T 14-10-2018 MC28_4980 2b9e83dcdb08e0519fbbaaf4db5b0953 187 SUPERFAMILY SSF53335 63 152 2.46E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MC28_2452 7c3ff2c29453220f5a44334dfa1cff83 476 Pfam PF03606 C4-dicarboxylate anaerobic carrier 18 469 5.8E-86 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 MC28_2439 84dc038962383da90b3c546ca720da6e 436 Pfam PF02667 Short chain fatty acid transporter 1 435 7.3E-163 T 14-10-2018 IPR006160 Short chain fatty acid transporter AtoE MC28_1233 783bdbd6d063235eb8cb85306b85c777 115 Pfam PF13141 Protein of unknown function (DUF3979) 2 113 1.5E-71 T 14-10-2018 IPR025045 Protein of unknown function DUF3979 MC28_3484 0faccc829ae27dccef93d93c60c4d23a 67 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 1.8E-29 T 14-10-2018 IPR009570 Stage III sporulation protein AC MC28_3484 0faccc829ae27dccef93d93c60c4d23a 67 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 62 2.0E-14 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family MC28_0886 7f6a8dc4bdee5f46f984be66d56806f7 460 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 442 2.5E-25 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 MC28_0886 7f6a8dc4bdee5f46f984be66d56806f7 460 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 23 116 5.2E-12 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 MC28_3160 b173164ad68a8635884ed2d6a3fc2e66 261 Pfam PF05709 Phage tail protein 31 261 9.6E-33 T 14-10-2018 IPR008841 Siphovirus-type tail component MC28_1073 e73ee8447f7ca6fd91be87d532c7cbaf 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1073 e73ee8447f7ca6fd91be87d532c7cbaf 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 182 196 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1073 e73ee8447f7ca6fd91be87d532c7cbaf 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 71 84 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1073 e73ee8447f7ca6fd91be87d532c7cbaf 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 28 43 1.0E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1073 e73ee8447f7ca6fd91be87d532c7cbaf 235 SUPERFAMILY SSF53474 5 231 1.54E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1073 e73ee8447f7ca6fd91be87d532c7cbaf 235 Pfam PF12697 Alpha/beta hydrolase family 5 228 1.1E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 MC28_1073 e73ee8447f7ca6fd91be87d532c7cbaf 235 Gene3D G3DSA:3.40.50.1820 2 235 2.3E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold MC28_1943 3ed6b5b74fda571df2222aaf5e651730 170 Gene3D G3DSA:3.40.630.30 5 168 1.3E-15 T 14-10-2018 MC28_1943 3ed6b5b74fda571df2222aaf5e651730 170 Pfam PF00583 Acetyltransferase (GNAT) family 38 147 1.1E-8 T 14-10-2018 IPR000182 GNAT domain MC28_1943 3ed6b5b74fda571df2222aaf5e651730 170 SUPERFAMILY SSF55729 13 156 7.21E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase MC28_2986 72eb989567d2d4e54ac46589f6b81732 1509 SUPERFAMILY SSF57997 477 618 4.97E-7 T 14-10-2018 MC28_2986 72eb989567d2d4e54ac46589f6b81732 1509 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 29 354 3.3E-53 T 14-10-2018 IPR007119 Phage minor structural protein, N-terminal domain MC28_3645 6130e0b1d28717d49b26aec160bad132 40 Pfam PF13215 Protein of unknown function (DUF4023) 1 38 1.4E-20 T 14-10-2018 IPR025097 Protein of unknown function DUF4023 MC28_1845 79e34a7f3f1807e7b16a84303850924c 258 Pfam PF02361 Cobalt transport protein 3 214 4.1E-27 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component MC28_5047 fd9cda975e9cc88fe34baa954ff50294 398 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 1.7E-17 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 MC28_5047 fd9cda975e9cc88fe34baa954ff50294 398 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 190 397 3.5E-53 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 MC28_3668 daf9deec711584d33cbece95390015c8 216 Pfam PF07423 Protein of unknown function (DUF1510) 5 215 3.7E-73 T 14-10-2018 IPR009988 Protein of unknown function DUF1510 MC28_2779 e96b1fd27f925031012f6e7f7966cc5b 67 Gene3D G3DSA:2.20.25.10 5 53 3.1E-5 T 14-10-2018 MC28_2600 8cf4761ce19e85b9ff4ad7fa71f3c3f1 154 Pfam PF04657 Putative inner membrane exporter, YdcZ 2 135 1.6E-25 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ MC28_2255 491f2a06ef0ab9a7b2fc69d79709e85d 163 ProDom PD095338 YXII PLASMID 1 158 6.0E-75 T 14-10-2018 IPR020323 Protein of unknown function DUF2716 MC28_2255 491f2a06ef0ab9a7b2fc69d79709e85d 163 Pfam PF10898 Protein of unknown function (DUF2716) 6 145 6.0E-54 T 14-10-2018 IPR020323 Protein of unknown function DUF2716 MC28_G345 08455cbd21e2612d196a25100ad09766 49 Pfam PF14553 YqbF, hypothetical protein domain 3 43 3.3E-18 T 14-10-2018 IPR027926 Uncharacterised protein YqbF domain MC28_2199 d3bc7c16f7d4a1a10019b9674c69e7fa 175 Pfam PF11193 Protein of unknown function (DUF2812) 15 125 2.4E-29 T 14-10-2018 IPR021359 Protein of unknown function DUF2812 MC28_4505 12d45737b67bd511cd1a8f719de07e3b 396 SUPERFAMILY SSF53756 3 314 5.73E-13 T 14-10-2018 MC28_1090 84a6d7c428d4c69eb19e5d8d935a445a 439 Pfam PF03222 Tryptophan/tyrosine permease family 40 408 1.9E-17 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 MC28_0913 4114d49ff0375ad2d9b199b67dbba4a9 253 Pfam PF01311 Bacterial export proteins, family 1 8 237 7.9E-48 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MC28_0913 4114d49ff0375ad2d9b199b67dbba4a9 253 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 72 91 6.6E-14 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MC28_0913 4114d49ff0375ad2d9b199b67dbba4a9 253 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 194 213 6.6E-14 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MC28_0913 4114d49ff0375ad2d9b199b67dbba4a9 253 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 172 194 6.6E-14 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MC28_0913 4114d49ff0375ad2d9b199b67dbba4a9 253 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 15 36 6.6E-14 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MC28_0920 d661289fc9e8df7a1606f71b85a66740 242 Pfam PF03591 AzlC protein 26 166 1.3E-40 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease MC28_0436 be305c28fdc1c92fffb697743d5bed48 188 Pfam PF13712 Glycosyltransferase like family 2 180 1.1E-68 T 14-10-2018 MC28_0436 be305c28fdc1c92fffb697743d5bed48 188 Gene3D G3DSA:3.90.550.10 1 187 2.3E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases MC28_3226 e947e9e21eed0014046cff41480fe326 100 TIGRFAM TIGR02908 CoxD_Bacillus: cytochrome c oxidase, subunit IVB 2 99 2.4E-43 T 14-10-2018 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 MC28_3226 e947e9e21eed0014046cff41480fe326 100 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 18 91 2.1E-15 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 MC28_F045 825f3438aba55dfc582207f1d609262a 102 SUPERFAMILY SSF51182 8 90 1.27E-5 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily MC28_3296 bc73cfef49e20825e2ffd3776a850506 249 Pfam PF13152 Protein of unknown function (DUF3967) 201 229 2.4E-14 T 14-10-2018 IPR025052 Domain of unknown function DUF3967 MC28_4199 b0a0b99e0f2c86d2f2d90a8573e00cf9 153 Pfam PF04463 Protein of unknown function (DUF523) 2 146 5.9E-43 T 14-10-2018 IPR007553 Domain of unknown function DUF523 MC28_2910 48c5a0b0101d8d4e0f116384ae0dbe7f 214 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 39 197 3.6E-6 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT MC28_3312 2ff51aab6336286292cf081664593a31 242 Pfam PF13803 Domain of unknown function (DUF4184) 1 236 3.1E-75 T 14-10-2018 IPR025238 Protein of unknown function DUF4184 MC28_0846 bb9897e95430af562a425cd23d81b20c 58 Pfam PF10782 Zinc-finger 2 58 2.6E-28 T 14-10-2018 IPR019718 Protein of unknown function DUF2602 MC28_1494 22968b2b049b8686df981a2b175a5eff 89 Pfam PF12728 Helix-turn-helix domain 35 84 2.7E-11 T 14-10-2018 MC28_C082 ee2af658d84df99d481bf495e8b71391 480 SUPERFAMILY SSF53098 11 478 7.59E-76 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_C082 ee2af658d84df99d481bf495e8b71391 480 Pfam PF01609 Transposase DDE domain 124 389 2.2E-46 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 MC28_3683 bb8943f14524fa603f89e3e23e88e76f 42 Pfam PF13056 Protein of unknown function (DUF3918) 3 42 1.1E-19 T 14-10-2018 IPR025029 Protein of unknown function DUF3918 MC28_3147 c1f221862c05065097926ad42a5fe0fd 176 Pfam PF13814 Replication-relaxation 11 141 3.0E-13 T 14-10-2018 IPR025855 Plasmid replication-relaxation MC28_2287 ba5b1fae93935e51aa0b1be2c045c118 393 Pfam PF12051 Protein of unknown function (DUF3533) 14 368 1.4E-24 T 14-10-2018 IPR022703 Domain of unknown function DUF3533 MC28_G007 d5d5eb215e6201c936236dabb78ff5f3 426 Gene3D G3DSA:1.20.1250.20 220 419 4.1E-23 T 14-10-2018 MC28_G007 d5d5eb215e6201c936236dabb78ff5f3 426 SUPERFAMILY SSF103473 18 415 3.92E-49 T 14-10-2018 IPR036259 MFS transporter superfamily MC28_G007 d5d5eb215e6201c936236dabb78ff5f3 426 Gene3D G3DSA:1.20.1250.20 16 208 1.4E-15 T 14-10-2018 MC28_G007 d5d5eb215e6201c936236dabb78ff5f3 426 Pfam PF07690 Major Facilitator Superfamily 40 313 5.8E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MC28_F116 6007af0f5fcddcc2c8803e29d7c54a8e 67 Gene3D G3DSA:2.70.240.10 14 66 8.4E-9 T 14-10-2018 MC28_4994 35ad717bb7c58bc7765d5bb4a45db357 264 Pfam PF03567 Sulfotransferase family 93 259 9.4E-8 T 14-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 MC28_0734 c756369741562a5e4ad0c48ea3853b7c 44 Pfam PF14140 YpzI-like protein 1 42 3.1E-27 T 14-10-2018 IPR025414 YpzI-like protein MC28_0245 9ebce653c8b3b18656c8c9f63123b158 176 Pfam PF11181 Heat induced stress protein YflT 8 60 1.6E-7 T 14-10-2018 IPR025889 General stress protein 17M-like domain MC28_3200 32b532c26e6d3c64eaf383c4feb6264c 72 Pfam PF12728 Helix-turn-helix domain 17 65 1.3E-11 T 14-10-2018 MC28_G109 2dc1290ed2743221700a2d01856e467c 196 Pfam PF13796 Putative sensor 15 190 1.1E-19 T 14-10-2018 IPR025828 Putative sensor domain MC28_4628 0774e1a788fbeecff48fcef4773c7cae 433 Pfam PF00860 Permease family 8 392 1.4E-59 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 MC28_1202 7cac321508c6236a163925baf3b05066 345 Pfam PF13271 Domain of unknown function (DUF4062) 6 88 3.9E-25 T 14-10-2018 IPR025139 Domain of unknown function DUF4062 MC28_3812 8739f690946be4f74be8583e54c049e3 226 Pfam PF12730 ABC-2 family transporter protein 16 152 1.6E-6 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 MC28_2984 cce3e7e8aa2a9000ef43edbff2a5d7a7 78 Pfam PF10779 Haemolysin XhlA 6 71 1.9E-15 T 14-10-2018 IPR019715 Haemolysin XhlA MC28_1963 7271b501fb40b3a0e93d27768b9ab50f 197 Gene3D G3DSA:2.60.20.10 106 197 5.9E-10 T 14-10-2018 MC28_2448 0718b534f9c5f3250659259ca15ff6d0 267 Pfam PF02361 Cobalt transport protein 9 186 8.1E-10 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component MC28_5283 c8aa0007fad94953370f0a80fa73d041 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 434 6.4E-206 T 14-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 MC28_5283 c8aa0007fad94953370f0a80fa73d041 434 Pfam PF03600 Citrate transporter 13 380 3.6E-52 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 MC28_2840 5ba61ba55d270a98832e7d1b2ce7f156 400 Pfam PF14907 Uncharacterised nucleotidyltransferase 41 289 1.6E-64 T 14-10-2018 IPR039498 Uncharacterised nucleotidyltransferase MC28_G268 b72065c7999cca9312e52ddd2e34d600 100 Gene3D G3DSA:3.90.20.10 2 97 4.4E-6 T 14-10-2018 MC28_4491 c49e7bd2ae2726902741cfec8e662ba6 260 Pfam PF13057 Protein of unknown function (DUF3919) 37 253 1.2E-43 T 14-10-2018 IPR025031 Protein of unknown function DUF3919 MC28_2782 7b9b2ae430fff412019be056c186c858 82 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 7.3E-24 T 14-10-2018 IPR018680 Protein of unknown function DUF2164 MC28_D011 8cf4afa5823e183dad360aa1480f0790 249 ProDom PD942754 PLASMID TRANSMEMBRANE MEMBRANE PXO2-22/BXB0021/GBAA_PXO2_0021 1 248 2.0E-117 T 14-10-2018 MC28_4975 6fdecd3283e7e7eed5bcdb6846920eca 358 Gene3D G3DSA:3.20.20.80 1 356 1.3E-13 T 14-10-2018 MC28_4975 6fdecd3283e7e7eed5bcdb6846920eca 358 Pfam PF14307 Glycosyltransferase WbsX 3 341 3.3E-138 T 14-10-2018 IPR032719 Glycosyltransferase WbsX MC28_1804 a6ccc1cb08f932f47c020fffe4d9cbd6 113 Pfam PF13053 Protein of unknown function (DUF3914) 1 89 5.3E-61 T 14-10-2018 IPR025025 Protein of unknown function DUF3914 MC28_D081 3272d44fa48b8cab34c12ad06ead5e8a 405 SUPERFAMILY SSF47413 22 74 6.82E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 MC28_2422 65ba8c5f10ba90cfaa3eaaa383d5ee04 66 Pfam PF14044 NETI protein 9 64 2.4E-29 T 14-10-2018 IPR025930 NETI protein MC28_3000 5b658989715b7a454c404c5e752a56a0 103 Pfam PF05119 Phage terminase, small subunit 13 84 6.1E-7 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family MC28_4381 7a5b97843eb767a08f4ead31eddb399b 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 110 8.4E-40 T 14-10-2018 IPR005562 SpoVA MC28_4381 7a5b97843eb767a08f4ead31eddb399b 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 6.5E-51 T 14-10-2018 IPR014204 Sporulation stage V, protein AE MC28_1547 d2b84655acd3f4ce94bd8274c3b3a93d 125 Pfam PF08863 YolD-like protein 33 124 1.7E-21 T 14-10-2018 IPR014962 YolD-like protein MC28_2766 f1ecd21555259c4b38ec27db50ce6eba 40 Pfam PF08179 Small acid-soluble spore protein P family 4 35 1.1E-14 T 14-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 MC28_3530 cadcb132c9e8ae0cae1a2687bbad9a8c 117 Pfam PF15980 Putative Competence protein ComGF 2 102 3.0E-20 T 14-10-2018 IPR016977 Competence operon G, ComGF MC28_0695 ece47e8e029935af30ec99e00f0b46b2 64 Pfam PF13062 Protein of unknown function (DUF3924) 1 62 5.7E-46 T 14-10-2018 IPR025038 Protein of unknown function DUF3924 MC28_1268 40e553099d7e323c7a9c6efb963adc1d 160 Pfam PF04306 Protein of unknown function (DUF456) 21 156 2.1E-37 T 14-10-2018 IPR007403 Protein of unknown function DUF456 MC28_F131 4c8e9262241ec72ceea3a286263b35e0 313 Pfam PF04892 VanZ like family 31 154 1.5E-12 T 14-10-2018 IPR006976 VanZ-like MC28_2960 9e4ce53b889f5ae24687b18c36e252f0 352 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 334 1.4E-43 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 MC28_E126 7dd63edcfc710f6e44b64ee520cae463 42 Pfam PF10782 Zinc-finger 2 41 6.1E-4 T 14-10-2018 IPR019718 Protein of unknown function DUF2602 MC28_3447 4b2351d09d970b4bb47a37d6facab83c 135 PIRSF PIRSF021328 1 135 3.5E-44 T 14-10-2018 IPR016787 Uncharacterised conserved protein UCP021328 MC28_3447 4b2351d09d970b4bb47a37d6facab83c 135 Pfam PF11208 Protein of unknown function (DUF2992) 3 135 6.2E-37 T 14-10-2018 IPR016787 Uncharacterised conserved protein UCP021328 MC28_3510 f7f9b712205ca50a5b2a6bc282001aef 198 Pfam PF13346 ABC-2 family transporter protein 4 194 5.7E-32 T 14-10-2018 IPR025699 ABC-2 membrane transporter-like MC28_4956 91dda8a804fa7912f1a0f764c02d5fd1 483 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 137 286 2.3E-9 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like MC28_0974 47ea82964280347d39b830ff20ff9b16 226 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 11 223 1.7E-10 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 MC28_2445 11c7e9d89901f9a34e06e21686bd9a7d 240 Pfam PF14256 YwiC-like protein 5 130 5.9E-43 T 14-10-2018 IPR025576 YwiC-like protein MC28_4805 3597cf768981aa5cab610fae4903f55b 170 Pfam PF05991 YacP-like NYN domain 5 167 7.2E-54 T 14-10-2018 IPR010298 Protein of unknown function DUF901 MC28_0866 99356ff72268e414e1320d176a3fd5af 229 Pfam PF01925 Sulfite exporter TauE/SafE 1 221 4.9E-29 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 MC28_2643 21d142d0fd3bdd381604739133a510a9 145 PIRSF PIRSF029598 9 145 5.5E-51 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 MC28_2643 21d142d0fd3bdd381604739133a510a9 145 Pfam PF06146 Phosphate-starvation-inducible E 65 129 3.5E-16 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like MC28_2643 21d142d0fd3bdd381604739133a510a9 145 Hamap MF_01048 Protein PsiE [psiE]. 10 143 25.821 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 MC28_2592 29719677330988a1063405908185897d 89 Gene3D G3DSA:3.30.1390.10 52 89 7.3E-6 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like MC28_D115 53809a46d98da0e2d274e9f78e99b96a 100 ProDom PD276036 PLASMID PXO2-19/BXB0018/GBAA_PXO2_0018 3 85 2.0E-25 T 14-10-2018 IPR020259 Uncharacterised protein family, plasmid pXO2-19 MC28_4309 224e55ba392989d98e4cb77611035c8d 197 Pfam PF09335 SNARE associated Golgi protein 30 155 8.4E-25 T 14-10-2018 IPR032816 SNARE associated Golgi protein MC28_0188 dae7455e0c5e74e85b65d468cdc2beb4 255 Pfam PF01925 Sulfite exporter TauE/SafE 13 247 1.3E-41 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 MC28_3717 752abb05efe1bac325347887d915fa54 215 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 15 206 3.4E-38 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like MC28_D160 3ab7e527150f817841eaafd40d2324f3 254 Pfam PF11185 Protein of unknown function (DUF2971) 117 187 5.1E-6 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 MC28_0997 47f05e4ced90b40237cd74efc27297e2 44 Pfam PF13070 Protein of unknown function (DUF3934) 1 42 9.2E-22 T 14-10-2018 IPR025175 Protein of unknown function DUF3934 MC28_3511 99c25d84b3f168f736c9d2e40537e78a 210 Pfam PF13346 ABC-2 family transporter protein 3 206 1.2E-36 T 14-10-2018 IPR025699 ABC-2 membrane transporter-like MC28_1327 83d16f4be5f44ec72cd0652bca1caef5 212 Pfam PF00882 Zinc dependent phospholipase C 6 87 1.5E-6 T 14-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 MC28_2818 14ab278b5d64500da5fe4b95ed5c201f 251 Pfam PF01925 Sulfite exporter TauE/SafE 4 244 7.3E-39 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 MC28_4610 975b0dd31893da1161efdc7c9d02271b 224 Pfam PF02163 Peptidase family M50 128 181 6.0E-9 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 MC28_0158 733cde07f9e0c67c8e4cb4b48fd31362 110 Pfam PF12986 Domain of unknown function (DUF3870) 2 92 7.2E-28 T 14-10-2018 IPR024617 Domain of unknown function DUF3870 MC28_2649 eea9b02db74d331f3af0264efae3d26a 169 Pfam PF13079 Protein of unknown function (DUF3916) 17 167 1.9E-67 T 14-10-2018 IPR025075 Protein of unknown function DUF3916 MC28_1571 014ad33fd4bfc4f5643e568a7fe35269 61 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 2 57 6.7E-24 T 14-10-2018 IPR018690 Protein of unknown function DUF2187 MC28_4874 ba7c2bdc4dc19725e648d5b2dc2dd7c1 168 Pfam PF07681 DoxX 16 114 6.1E-10 T 14-10-2018 IPR032808 DoxX family MC28_3787 20082597ad348f8632ebd5e8f673d253 408 Pfam PF12698 ABC-2 family transporter protein 19 379 1.0E-42 T 14-10-2018 MC28_4666 b286a8e0139bfd62fa9d2d55eea67500 127 Pfam PF04138 GtrA-like protein 6 119 1.6E-28 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 MC28_G131 2a166286eb943d4fc106b325ebb6bb30 250 Gene3D G3DSA:2.60.20.10 155 249 1.1E-9 T 14-10-2018 MC28_G131 2a166286eb943d4fc106b325ebb6bb30 250 SUPERFAMILY SSF49695 156 217 5.69E-5 T 14-10-2018 IPR011024 Gamma-crystallin-like MC28_3463 074c6cf3aea8d6b28acd4d200543eeed 472 ProDom PD141294 TRANSMEMBRANE MEMBRANE PROTEIN GTRIV-SF YFDI PREDICTED 30 335 4.0E-176 T 14-10-2018 MC28_4550 cd37f35b6d7beada6ca7a2968c5ad15e 60 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 1 50 2.8E-14 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter MC28_1360 dec0f9034484b6d5082310620dd11aa8 262 Pfam PF03567 Sulfotransferase family 21 258 2.3E-8 T 14-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 MC28_3168 47c0ea34eb7c4700b1142521a959b562 91 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 1 81 5.8E-8 T 14-10-2018 IPR006450 Phage protein of unkonwn function MC28_F123 4eaf4ac9967b4ea61bc58e48ec2f9ec2 127 Pfam PF06115 Domain of unknown function (DUF956) 4 119 1.5E-55 T 14-10-2018 IPR010360 Protein of unknown function DUF956 MC28_F123 4eaf4ac9967b4ea61bc58e48ec2f9ec2 127 PIRSF PIRSF021265 4 126 4.3E-56 T 14-10-2018 IPR010360 Protein of unknown function DUF956 MC28_3980 b36f13ca425c4d3e501e6b321ab94b05 92 Pfam PF14165 YtzH-like protein 3 88 3.7E-38 T 14-10-2018 IPR025547 YtzH-like protein MC28_F279 7b753702c57bc598b1915203279e0387 111 SUPERFAMILY SSF53098 23 109 6.9E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily MC28_3886 99d1b026058eaef1ca02874e71536cdc 73 Pfam PF14007 YtpI-like protein 1 62 1.7E-22 T 14-10-2018 IPR025618 YtpI-like protein MC28_0964 3f264377941370ccd6a649b52b0c27f4 143 Pfam PF06713 Bacterial PH domain 57 131 1.4E-18 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 MC28_3252 4d829e4648a34cf3b200af2b6ab7aa08 42 Pfam PF13790 SR1 protein 1 37 3.1E-19 T 14-10-2018 IPR025236 SR1 protein MC28_4482 274bc8f166f671c47f18f9cc621a6bc2 132 Pfam PF14271 Domain of unknown function (DUF4359) 16 119 4.5E-17 T 14-10-2018 IPR025578 Protein of unknown function DUF4359 MC28_2350 39b2090e08d5f57fa579514aad0c76fc 117 Pfam PF13564 DoxX-like family 10 108 7.9E-14 T 14-10-2018 IPR032808 DoxX family MC28_G240 f86e8ca3559113cb203c4dda53dfc059 437 Pfam PF12965 Domain of unknown function (DUF3854) 348 427 1.0E-5 T 14-10-2018 IPR024385 Domain of unknown function DUF3854 MC28_0391 1f0516a06660dd63e1584965a4f6d228 60 Pfam PF11151 Protein of unknown function (DUF2929) 1 55 1.3E-20 T 14-10-2018 IPR021324 Protein of unknown function DUF2929 MC28_2245 73a0bc47126c3379aa4c9c40e73f019b 274 Pfam PF10978 Protein of unknown function (DUF2785) 81 249 1.3E-50 T 14-10-2018 IPR021247 Protein of unknown function DUF2785 MC28_4377 f3fdfc9550caf4be237100dfb01aa128 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 9.0E-22 T 14-10-2018 IPR012452 Protein of unknown function DUF1657 MC28_4774 1c71e8cb3960f92a8b681248c41bdd31 119 Pfam PF04977 Septum formation initiator 44 118 2.3E-18 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC MC28_1351 206ca8f4e74e61af1989e7760962d758 167 SUPERFAMILY SSF52091 47 163 2.04E-9 T 14-10-2018 IPR036513 STAS domain superfamily MC28_4079 34e33a1dec2f16f04f9b6cc248024490 45 Pfam PF13129 Protein of unknown function (DUF3953) 1 41 2.1E-12 T 14-10-2018 IPR025018 Protein of unknown function DUF3953 MC28_0037 e3487c9a0b60139ee8945bfb4f70b6cc 176 Pfam PF13798 Protein of unknown function with PCYCGC motif 16 174 3.3E-72 T 14-10-2018 IPR025673 Protein of unknown function with PCYCGC motif MC28_C101 262633c99b462fb05aba35ab52c8b908 136 SUPERFAMILY SSF56849 45 116 1.57E-10 T 14-10-2018 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily GO:0090729 MC28_1970 3b6c7ce91a1b31cbc630f29cd55f73b2 115 Pfam PF13789 Domain of unknown function (DUF4181) 6 106 5.8E-26 T 14-10-2018 IPR025441 Protein of unknown function DUF4181 MC28_0298 bcc373b341adf03d527bffdf624e6e15 158 Pfam PF03703 Bacterial PH domain 72 147 6.3E-17 T 14-10-2018 IPR005182 Domain of unknown function DUF304 MC28_2842 6f6c3319309ef72c20f7f27ed575324a 78 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 4 70 7.2E-15 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D MC28_4658 d3d90958479500fcc11b9c9ce8a20477 422 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 114 258 8.7E-9 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like MC28_1406 1e79e1c59eeefa0a7dfa0da3b9f10efa 195 Pfam PF14005 YpjP-like protein 62 193 5.6E-61 T 14-10-2018 IPR025616 YpjP-like protein MC28_0027 8f50a48ced1caab11311a8470b332237 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 321 1.4E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 MC28_2868 b649ee395fe72a970a6f6bbe48f1324f 207 Pfam PF03458 UPF0126 domain 5 78 1.4E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 MC28_2868 b649ee395fe72a970a6f6bbe48f1324f 207 Pfam PF03458 UPF0126 domain 92 160 1.8E-17 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 MC28_0454 2ca8418e847169713856a160b2ee34d6 157 Pfam PF06713 Bacterial PH domain 78 151 2.1E-24 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 MC28_D050 2e59df53a20f914cd9a8bf9be41d216e 150 Pfam PF02517 CAAX protease self-immunity 51 139 8.6E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_0602 ce435ab00603ee1ee97fce2e8bd2d434 132 Pfam PF07179 SseB protein N-terminal domain 10 120 3.2E-14 T 14-10-2018 IPR009839 SseB protein N-terminal domain MC28_4904 9fb5f2adf94db36934433b2b0d0b7f20 323 Pfam PF00892 EamA-like transporter family 163 297 5.9E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_4904 9fb5f2adf94db36934433b2b0d0b7f20 323 Pfam PF00892 EamA-like transporter family 9 147 3.5E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 MC28_4192 5996fc90a4b779ba8d9961f1c6ed17c0 105 Pfam PF14068 Putative membrane protein 6 105 5.3E-42 T 14-10-2018 IPR025917 Putative membrane protein YuiB MC28_1072 6ca6aaf85ae1bb7a5ad200ee2b09f8af 304 Pfam PF04982 HPP family 38 144 8.0E-6 T 14-10-2018 IPR007065 HPP MC28_G319 a335e52741531906fcc878a175eee973 113 Pfam PF08863 YolD-like protein 21 113 2.9E-23 T 14-10-2018 IPR014962 YolD-like protein MC28_4558 1d266f29f1027cf3e65464b605d33749 128 Pfam PF07681 DoxX 5 93 1.2E-20 T 14-10-2018 IPR032808 DoxX family MC28_3277 30b90ceecf8798963254cd9252ea30c7 162 Pfam PF13158 Protein of unknown function (DUF3993) 9 123 3.3E-46 T 14-10-2018 IPR025056 Protein of unknown function DUF3993 MC28_0677 0856de8a550d3fab8741147c235a5452 98 Pfam PF13059 Protein of unknown function (DUF3992) 18 96 5.7E-56 T 14-10-2018 IPR025035 Protein of unknown function DUF3922 MC28_2241 0b0141b753cca502da7c634f2ba9a7e4 104 Pfam PF13031 Protein of unknown function (DUF3892) 35 102 7.6E-17 T 14-10-2018 IPR024997 Protein of unknown function DUF3892 MC28_4131 dcaa328e9bd68941dba3afff02b74c1b 63 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 19 38 6.3E-10 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_4131 dcaa328e9bd68941dba3afff02b74c1b 63 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 19 40 1.1E-9 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like MC28_F144 f35fd5e70cd7ab8d821d5c43184ce4b2 792 Pfam PF02687 FtsX-like permease family 693 783 3.0E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_F144 f35fd5e70cd7ab8d821d5c43184ce4b2 792 Pfam PF02687 FtsX-like permease family 234 330 1.2E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_3251 616ea1e3307b8db7798eba404afa5e93 42 Pfam PF13790 SR1 protein 1 37 4.5E-15 T 14-10-2018 IPR025236 SR1 protein MC28_4353 da99e13a74c009853a9053d9e94489d8 410 Pfam PF00860 Permease family 3 376 4.3E-63 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 MC28_5391 b92b7baf5a4211a9e27837b042a776ce 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 303 8.0E-53 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 MC28_3241 75790de6e7a5d58d1c4889d8a36a5334 96 Pfam PF14036 YlaH-like protein 12 87 1.1E-32 T 14-10-2018 IPR025620 YlaH-like protein MC28_0168 459bb3fbcebbd2e42cf3727e1e6e9ea6 81 Pfam PF13930 DNA/RNA non-specific endonuclease 1 67 3.6E-20 T 14-10-2018 MC28_1261 182a9d9879df3edab3ab0634991f1a35 298 Pfam PF03773 Predicted permease 11 293 5.6E-80 T 14-10-2018 IPR005524 Predicted permease DUF318 MC28_2479 5647c21bfecd20a7b8b5694eeada88da 279 Pfam PF10978 Protein of unknown function (DUF2785) 80 253 4.5E-50 T 14-10-2018 IPR021247 Protein of unknown function DUF2785 MC28_4264 7828544cc1c654cc7e9d5785e8ebc585 340 Pfam PF13303 Phosphotransferase system, EIIC 14 336 1.3E-100 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 MC28_4609 16443e647b7fe95251519ee8e507e8bc 169 Pfam PF08741 YwhD family 5 166 3.1E-85 T 14-10-2018 IPR014852 Uncharacterised protein YwhD MC28_F219 82aab135bb14fb31bc83f2f58adffb07 234 Pfam PF14311 Probable Zinc-ribbon domain 155 214 6.7E-15 T 14-10-2018 IPR025487 Probable Zinc-ribbon domain MC28_F219 82aab135bb14fb31bc83f2f58adffb07 234 Pfam PF14311 Probable Zinc-ribbon domain 13 69 1.5E-10 T 14-10-2018 IPR025487 Probable Zinc-ribbon domain MC28_F219 82aab135bb14fb31bc83f2f58adffb07 234 Pfam PF14311 Probable Zinc-ribbon domain 85 143 1.4E-5 T 14-10-2018 IPR025487 Probable Zinc-ribbon domain MC28_0311 fc77b81aad19eed19ed1b7f5fb1a697b 552 Pfam PF05569 BlaR1 peptidase M56 7 234 8.3E-51 T 14-10-2018 IPR008756 Peptidase M56 MC28_0597 f8ad8c9a5ab07d16ff0b5f4461ff19d2 321 SUPERFAMILY SSF89447 278 320 3.84E-5 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily MC28_0597 f8ad8c9a5ab07d16ff0b5f4461ff19d2 321 Pfam PF02517 CAAX protease self-immunity 114 197 1.8E-20 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_2472 853ba06a0d2ef78460b74e8cb4f8a73d 119 Pfam PF12676 Protein of unknown function (DUF3796) 4 114 5.3E-34 T 14-10-2018 IPR024257 Protein of unknown function DUF3796 MC28_4007 607bf47da5191b6ae5a383e30f44be1f 74 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 2.3E-17 T 14-10-2018 IPR019618 Spore germination protein GerPA/GerPF MC28_2218 432d0d48eccc769e9e5a402054db4899 155 Pfam PF15565 Immunity protein 30 12 113 1.7E-29 T 14-10-2018 IPR029084 Immunity protein 30 MC28_5238 7a709ad24e2dc08321e66efb4ec7f60c 39 Pfam PF14152 YfhE-like protein 2 37 5.0E-20 T 14-10-2018 IPR025437 YfhE-like protein MC28_0742 567ed3dd48d087cb8af61962d2d7a037 218 ProDom PD119161 YPHF BH1644 PROTEINS PRECURSOR ORF1 RBL05088 SIGNAL SIMILAR 1 218 6.0E-116 T 14-10-2018 MC28_F209 f7c0abdb154a16c54ee5c84b892cf31a 272 Pfam PF13349 Putative adhesin 52 269 1.0E-10 T 14-10-2018 IPR025164 Putative adhesin MC28_G148 8ac9724ff4cdb8edf72b1429403a3739 255 Pfam PF01925 Sulfite exporter TauE/SafE 13 247 6.9E-42 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 MC28_3834 c6f7f7575a23d676037d42cbaff44e8b 179 Pfam PF02674 Colicin V production protein 2 159 6.4E-34 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 MC28_1708 c61cff9c73ec84efd8c34838833c6a81 275 Gene3D G3DSA:2.30.30.40 178 250 9.2E-6 T 14-10-2018 MC28_4953 94a4001484942636b1b4f52df8571553 249 Pfam PF02517 CAAX protease self-immunity 131 216 1.0E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 MC28_G288 97391a2fe248955f012b3d4dfa5194fd 185 Pfam PF13814 Replication-relaxation 53 137 3.1E-7 T 14-10-2018 IPR025855 Plasmid replication-relaxation MC28_1658 2820e679826f36553ab34142003aa3ab 302 TIGRFAM TIGR03721 exospore_TM: BclB C-terminal domain 139 302 6.8E-66 T 14-10-2018 IPR021210 Exosporium BclB, C-terminal MC28_G181 72d6591cf2d4043b00c7cf9662f8c03e 252 Pfam PF06161 Protein of unknown function (DUF975) 150 241 6.9E-23 T 14-10-2018 IPR010380 Protein of unknown function DUF975 MC28_4648 b12cf7897b23f2e1ac226645fa818ca3 67 Pfam PF04328 Selenoprotein, putative 4 67 4.5E-24 T 14-10-2018 IPR007423 Selenoprotein, putative MC28_3667 02fa1aec2e4b40101bf5e1517e9bbbd3 71 Pfam PF10750 Protein of unknown function (DUF2536) 1 68 5.8E-37 T 14-10-2018 IPR019686 Protein of unknown function DUF2536 MC28_5128 9a3b0737954ea6dc4dfd47e28d1bd2df 543 Pfam PF14266 Putative component of 'biosynthetic module' 40 525 3.3E-162 T 14-10-2018 IPR025647 Putative component of 'biosynthetic module' MC28_0381 ff12f10b3fd3b48e5ab66cbf4ac487bc 168 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 14 75 2.0E-12 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 MC28_0381 ff12f10b3fd3b48e5ab66cbf4ac487bc 168 Gene3D G3DSA:2.180.10.10 1 105 1.3E-11 T 14-10-2018 MC28_4027 c5735b602e3ececdd316f0d3b34c1321 340 Pfam PF04235 Protein of unknown function (DUF418) 165 333 3.3E-30 T 14-10-2018 IPR007349 Domain of unknown function DUF418 MC28_0033 661daa402943ed55ec7339568663c4b4 71 Pfam PF07561 Domain of Unknown Function (DUF1540) 4 67 9.6E-14 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 MC28_1337 42173224e5f2ce5afcdee5a1287e77aa 404 Pfam PF01882 Protein of unknown function DUF58 206 277 1.4E-19 T 14-10-2018 IPR002881 Domain of unknown function DUF58 MC28_3651 dd6c797f21c97f0744841faab0ac74f4 134 Pfam PF07681 DoxX 7 87 6.5E-21 T 14-10-2018 IPR032808 DoxX family MC28_0466 5ab6390f78356fc0e25983ab5ba72993 499 Pfam PF02652 L-lactate permease 2 491 4.1E-60 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 MC28_0471 11388304b3f53bcaf21aed8f1b492302 145 Pfam PF15571 Immunity protein 44 5 129 3.8E-50 T 14-10-2018 IPR029078 Immunity protein 44 MC28_2219 2a32753a2e48c883bdcb4dcd08629ff4 500 Pfam PF04740 LXG domain of WXG superfamily 6 172 2.4E-9 T 14-10-2018 IPR006829 LXG domain MC28_2095 a265ee584340d42dfe3135c2a581ad7e 197 Pfam PF16107 Domain of unknown function (DUF4825) 39 131 4.4E-15 T 14-10-2018 IPR032250 Domain of unknown function DUF4825 MC28_5327 5667ec31f1c593307ccb0ff21d3aec73 182 Pfam PF09335 SNARE associated Golgi protein 33 149 4.5E-18 T 14-10-2018 IPR032816 SNARE associated Golgi protein MC28_2650 12ec02e87e51fe06e3b2282c3b1d7c26 224 Pfam PF02698 DUF218 domain 35 170 2.0E-12 T 14-10-2018 IPR003848 Domain of unknown function DUF218 MC28_G344 f6cd57a1b61f9f19242ccd6c3bef8f8a 326 Pfam PF05065 Phage capsid family 32 288 1.2E-7 T 14-10-2018 IPR024455 Phage capsid MC28_2432 2f74e382f5342f8e43e06ac565e7f28a 568 Pfam PF02687 FtsX-like permease family 35 129 1.3E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 MC28_4743 f60efb0cd246ece73befed917a41d3cf 59 Pfam PF10764 Inhibitor of sigma-G Gin 8 52 1.4E-18 T 14-10-2018 IPR019700 Anti-sigma-G factor Gin MC28_G017 6770cfee45a833fa902ca8fdb67ead17 52 TIGRFAM TIGR04429 Phr_nterm: Phr family secreted Rap phosphatase inhibitor 1 28 7.5E-8 T 14-10-2018 IPR030968 Phr family, secreted RapG/RapK phosphatase inhibitor