locus-tag class description XI92_00025 PF12833 Helix-turn-helix domain XI92_00025 PF17853 GGDEF-like domain XI92_00045 PF00149 Calcineurin-like phosphoesterase XI92_00045 PF17936 Bacterial Ig domain XI92_00045 PF02872 5'-nucleotidase, C-terminal domain XI92_00050 PF00561 alpha/beta hydrolase fold XI92_00055 PF00857 Isochorismatase family XI92_00070 PF01979 Amidohydrolase family XI92_00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_00075 PF03466 LysR substrate binding domain XI92_00090 PF18496 Collagenase G catalytic helper subdomain XI92_00090 PF08453 Peptidase family M9 N-terminal XI92_00090 PF01752 Collagenase XI92_00110 PF01544 CorA-like Mg2+ transporter protein XI92_00125 PF11181 Heat induced stress protein YflT XI92_00150 PF03073 TspO/MBR family XI92_00155 PF00875 DNA photolyase XI92_00155 PF03441 FAD binding domain of DNA photolyase XI92_00180 PF07859 alpha/beta hydrolase fold XI92_00190 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) XI92_00195 PF00361 Proton-conducting membrane transporter XI92_00195 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XI92_00200 PF10057 Uncharacterized conserved protein (DUF2294) XI92_00205 PF01522 Polysaccharide deacetylase XI92_00215 PF01040 UbiA prenyltransferase family XI92_00220 PF12833 Helix-turn-helix domain XI92_00220 PF01965 DJ-1/PfpI family XI92_00225 PF12746 GNAT acetyltransferase XI92_00230 PF01451 Low molecular weight phosphotyrosine protein phosphatase XI92_00240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_00245 PF01022 Bacterial regulatory protein, arsR family XI92_00255 PF07690 Major Facilitator Superfamily XI92_00260 PF00440 Bacterial regulatory proteins, tetR family XI92_00270 PF01037 Lrp/AsnC ligand binding domain XI92_00285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_00330 PF00196 Bacterial regulatory proteins, luxR family XI92_00330 PF00072 Response regulator receiver domain XI92_00355 PF00067 Cytochrome P450 XI92_00355 PF00667 FAD binding domain XI92_00355 PF00258 Flavodoxin XI92_00355 PF00175 Oxidoreductase NAD-binding domain XI92_00360 PF07690 Major Facilitator Superfamily XI92_00380 PF00291 Pyridoxal-phosphate dependent enzyme XI92_00390 PF01139 tRNA-splicing ligase RtcB XI92_00400 PF04072 Leucine carboxyl methyltransferase XI92_00415 PF00005 ABC transporter XI92_00420 PF02687 FtsX-like permease family XI92_00425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_00425 PF00672 HAMP domain XI92_00425 PF00512 His Kinase A (phospho-acceptor) domain XI92_00430 PF00486 Transcriptional regulatory protein, C terminal XI92_00430 PF00072 Response regulator receiver domain XI92_00435 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_00435 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_00465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XI92_00465 PF01842 ACT domain XI92_00465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XI92_00470 PF00266 Aminotransferase class-V XI92_00495 PF13569 Domain of unknown function (DUF4132) XI92_00505 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_00505 PF01471 Putative peptidoglycan binding domain XI92_00505 PF01476 LysM domain XI92_00520 PF00665 Integrase core domain XI92_00525 PF01695 IstB-like ATP binding protein XI92_00540 PF05791 Bacillus haemolytic enterotoxin (HBL) XI92_00565 PF01022 Bacterial regulatory protein, arsR family XI92_00575 PF00689 Cation transporting ATPase, C-terminus XI92_00575 PF00690 Cation transporter/ATPase, N-terminus XI92_00585 PF01769 Divalent cation transporter XI92_00585 PF03448 MgtE intracellular N domain XI92_00585 PF00571 CBS domain XI92_00590 PF13302 Acetyltransferase (GNAT) domain XI92_00595 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_00595 PF01348 Type II intron maturase XI92_00635 PF00975 Thioesterase domain XI92_00640 PF01648 4'-phosphopantetheinyl transferase superfamily XI92_00645 PF00501 AMP-binding enzyme XI92_00645 PF00550 Phosphopantetheine attachment site XI92_00645 PF00668 Condensation domain XI92_00645 PF13193 AMP-binding enzyme C-terminal domain XI92_00650 PF00501 AMP-binding enzyme XI92_00650 PF13193 AMP-binding enzyme C-terminal domain XI92_00650 PF00550 Phosphopantetheine attachment site XI92_00650 PF00668 Condensation domain XI92_00650 PF07993 Male sterility protein XI92_00655 PF00668 Condensation domain XI92_00655 PF13193 AMP-binding enzyme C-terminal domain XI92_00655 PF00501 AMP-binding enzyme XI92_00655 PF00550 Phosphopantetheine attachment site XI92_00660 PF07690 Major Facilitator Superfamily XI92_00670 PF07943 Penicillin-binding protein 5, C-terminal domain XI92_00670 PF00768 D-alanyl-D-alanine carboxypeptidase XI92_00675 PF00132 Bacterial transferase hexapeptide (six repeats) XI92_00680 PF01925 Sulfite exporter TauE/SafE XI92_00690 PF13276 HTH-like domain XI92_00690 PF13333 Integrase core domain XI92_00690 PF00665 Integrase core domain XI92_00700 PF18277 AbrB C-terminal domain XI92_00700 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XI92_00710 PF00196 Bacterial regulatory proteins, luxR family XI92_00710 PF00072 Response regulator receiver domain XI92_00725 PF01546 Peptidase family M20/M25/M40 XI92_00725 PF07687 Peptidase dimerisation domain XI92_00745 PF14171 Toxin SpoIISA, type II toxin-antitoxin system XI92_00750 PF00300 Histidine phosphatase superfamily (branch 1) XI92_00755 PF01047 MarR family XI92_00760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XI92_00760 PF00205 Thiamine pyrophosphate enzyme, central domain XI92_00760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XI92_00765 PF08241 Methyltransferase domain XI92_00775 PF09313 Domain of unknown function (DUF1971) XI92_00775 PF03848 Tellurite resistance protein TehB XI92_00790 PF17932 Tetracyclin repressor-like, C-terminal domain XI92_00790 PF00440 Bacterial regulatory proteins, tetR family XI92_00800 PF00271 Helicase conserved C-terminal domain XI92_00800 PF00270 DEAD/DEAH box helicase XI92_00810 PF16123 Hydroxyacylglutathione hydrolase C-terminus XI92_00810 PF00753 Metallo-beta-lactamase superfamily XI92_00825 PF07690 Major Facilitator Superfamily XI92_00830 PF01047 MarR family XI92_00835 PF00291 Pyridoxal-phosphate dependent enzyme XI92_00840 PF00266 Aminotransferase class-V XI92_00845 PF02660 Glycerol-3-phosphate acyltransferase XI92_00850 PF01869 BadF/BadG/BcrA/BcrD ATPase family XI92_00865 PF02378 Phosphotransferase system, EIIC XI92_00875 PF02638 Glycosyl hydrolase-like 10 XI92_00900 PF08281 Sigma-70, region 4 XI92_00900 PF12680 SnoaL-like domain XI92_00900 PF04542 Sigma-70 region 2 XI92_00905 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_00905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XI92_00940 PF01381 Helix-turn-helix XI92_00940 PF07883 Cupin domain XI92_00945 PF01810 LysE type translocator XI92_00970 PF00664 ABC transporter transmembrane region XI92_00970 PF00005 ABC transporter XI92_00975 PF00005 ABC transporter XI92_00975 PF00664 ABC transporter transmembrane region XI92_00990 PF03473 MOSC domain XI92_00990 PF03475 3-alpha domain XI92_00995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_00995 PF03466 LysR substrate binding domain XI92_01015 PF02774 Semialdehyde dehydrogenase, dimerisation domain XI92_01015 PF01118 Semialdehyde dehydrogenase, NAD binding domain XI92_01020 PF03466 LysR substrate binding domain XI92_01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_01040 PF00313 'Cold-shock' DNA-binding domain XI92_01050 PF13302 Acetyltransferase (GNAT) domain XI92_01085 PF00583 Acetyltransferase (GNAT) family XI92_01100 PF00302 Chloramphenicol acetyltransferase XI92_01120 PF00753 Metallo-beta-lactamase superfamily XI92_01120 PF16123 Hydroxyacylglutathione hydrolase C-terminus XI92_01145 PF00027 Cyclic nucleotide-binding domain XI92_01185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XI92_01185 PF00205 Thiamine pyrophosphate enzyme, central domain XI92_01185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XI92_01195 PF00005 ABC transporter XI92_01200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XI92_01200 PF03129 Anticodon binding domain XI92_01200 PF02824 TGS domain XI92_01200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XI92_01205 PF00849 RNA pseudouridylate synthase XI92_01205 PF01479 S4 domain XI92_01210 PF16291 Domain of unknown function (DUF4937 XI92_01225 PF01235 Sodium:alanine symporter family XI92_01230 PF00082 Subtilase family XI92_01235 PF05163 DinB family XI92_01245 PF00216 Bacterial DNA-binding protein XI92_01260 PF07690 Major Facilitator Superfamily XI92_01265 PF03621 MbtH-like protein XI92_01270 PF00501 AMP-binding enzyme XI92_01270 PF13193 AMP-binding enzyme C-terminal domain XI92_01270 PF00668 Condensation domain XI92_01270 PF00975 Thioesterase domain XI92_01270 PF00550 Phosphopantetheine attachment site XI92_01275 PF00550 Phosphopantetheine attachment site XI92_01275 PF00857 Isochorismatase family XI92_01280 PF00501 AMP-binding enzyme XI92_01280 PF13193 AMP-binding enzyme C-terminal domain XI92_01285 PF00425 chorismate binding enzyme XI92_01290 PF00106 short chain dehydrogenase XI92_01295 PF07690 Major Facilitator Superfamily XI92_01310 PF01022 Bacterial regulatory protein, arsR family XI92_01320 PF13476 AAA domain XI92_01325 PF12320 Type 5 capsule protein repressor C-terminal domain XI92_01325 PF00149 Calcineurin-like phosphoesterase XI92_01340 PF00378 Enoyl-CoA hydratase/isomerase XI92_01345 PF01810 LysE type translocator XI92_01350 PF00171 Aldehyde dehydrogenase family XI92_01355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XI92_01355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XI92_01360 PF02770 Acyl-CoA dehydrogenase, middle domain XI92_01360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XI92_01360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XI92_01370 PF03972 MmgE/PrpD family XI92_01375 PF00285 Citrate synthase, C-terminal domain XI92_01380 PF01521 Iron-sulphur cluster biosynthesis XI92_01385 PF07690 Major Facilitator Superfamily XI92_01395 PF00905 Penicillin binding protein transpeptidase domain XI92_01395 PF00912 Transglycosylase XI92_01415 PF00106 short chain dehydrogenase XI92_01430 PF10676 Spore germination protein gerPA/gerPF XI92_01440 PF01695 IstB-like ATP binding protein XI92_01445 PF00665 Integrase core domain XI92_01495 PF00085 Thioredoxin XI92_01500 PF01545 Cation efflux family XI92_01500 PF16916 Dimerisation domain of Zinc Transporter XI92_01505 PF01569 PAP2 superfamily XI92_01515 PF00069 Protein kinase domain XI92_01515 PF08239 Bacterial SH3 domain XI92_01525 PF14162 YozD-like protein XI92_01540 PF06855 YozE SAM-like fold XI92_01545 PF14122 YokU-like protein, putative antitoxin XI92_01550 PF12544 Lysine-2,3-aminomutase XI92_01555 PF00158 Sigma-54 interaction domain XI92_01555 PF13426 PAS domain XI92_01555 PF02954 Bacterial regulatory protein, Fis family XI92_01560 PF00583 Acetyltransferase (GNAT) family XI92_01565 PF01546 Peptidase family M20/M25/M40 XI92_01565 PF07687 Peptidase dimerisation domain XI92_01570 PF01144 Coenzyme A transferase XI92_01575 PF01144 Coenzyme A transferase XI92_01580 PF00202 Aminotransferase class-III XI92_01590 PF09385 Histidine kinase N terminal XI92_01595 PF07997 Protein of unknown function (DUF1694) XI92_01600 PF00171 Aldehyde dehydrogenase family XI92_01605 PF01595 Cyclin M transmembrane N-terminal domain XI92_01605 PF03471 Transporter associated domain XI92_01605 PF00571 CBS domain XI92_01635 PF13520 Amino acid permease XI92_01640 PF00528 Binding-protein-dependent transport system inner membrane component XI92_01645 PF00571 CBS domain XI92_01645 PF00005 ABC transporter XI92_01660 PF03358 NADPH-dependent FMN reductase XI92_01675 PF10924 Protein of unknown function (DUF2711) XI92_01680 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XI92_01680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XI92_01685 PF02447 GntP family permease XI92_01690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XI92_01690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XI92_01705 PF08240 Alcohol dehydrogenase GroES-like domain XI92_01705 PF00107 Zinc-binding dehydrogenase XI92_01710 PF02567 Phenazine biosynthesis-like protein XI92_01715 PF01380 SIS domain XI92_01715 PF01418 Helix-turn-helix domain, rpiR family XI92_01720 PF00072 Response regulator receiver domain XI92_01720 PF00196 Bacterial regulatory proteins, luxR family XI92_01725 PF13185 GAF domain XI92_01725 PF07730 Histidine kinase XI92_01730 PF00924 Mechanosensitive ion channel XI92_01735 PF00011 Hsp20/alpha crystallin family XI92_01740 PF00857 Isochorismatase family XI92_01755 PF00881 Nitroreductase family XI92_01760 PF01063 Amino-transferase class IV XI92_01765 PF01497 Periplasmic binding protein XI92_01785 PF00733 Asparagine synthase XI92_01785 PF13537 Glutamine amidotransferase domain XI92_01790 PF00011 Hsp20/alpha crystallin family XI92_01795 PF02630 SCO1/SenC XI92_01805 PF02645 Uncharacterised protein, DegV family COG1307 XI92_01815 PF00902 Sec-independent protein translocase protein (TatC) XI92_01820 PF02416 mttA/Hcf106 family XI92_01825 PF03006 Haemolysin-III related XI92_01830 PF01553 Acyltransferase XI92_01835 PF02525 Flavodoxin-like fold XI92_01845 PF00186 Dihydrofolate reductase XI92_01850 PF00303 Thymidylate synthase XI92_01855 PF07930 D-aminopeptidase, domain B XI92_01855 PF00144 Beta-lactamase XI92_01870 PF13419 Haloacid dehalogenase-like hydrolase XI92_01875 PF14005 YpjP-like protein XI92_01880 PF05975 Bacterial ABC transporter protein EcsB XI92_01885 PF00005 ABC transporter XI92_01900 PF13443 Cro/C1-type HTH DNA-binding domain XI92_01905 PF11188 Protein of unknown function (DUF2975) XI92_01910 PF00583 Acetyltransferase (GNAT) family XI92_01915 PF01980 tRNA-methyltransferase O XI92_01920 PF01177 Asp/Glu/Hydantoin racemase XI92_01925 PF00465 Iron-containing alcohol dehydrogenase XI92_01940 PF10997 Alternate to MurJ XI92_01955 PF00209 Sodium:neurotransmitter symporter family XI92_01960 PF00152 tRNA synthetases class II (D, K and N) XI92_01960 PF01336 OB-fold nucleic acid binding domain XI92_01975 PF13276 HTH-like domain XI92_01975 PF00665 Integrase core domain XI92_01975 PF13333 Integrase core domain XI92_01995 PF00133 tRNA synthetases class I (I, L, M and V) XI92_01995 PF08264 Anticodon-binding domain of tRNA XI92_02020 PF03485 Arginyl tRNA synthetase N terminal domain XI92_02020 PF05746 DALR anticodon binding domain XI92_02020 PF00750 tRNA synthetases class I (R) XI92_02025 PF04445 Putative SAM-dependent methyltransferase XI92_02030 PF06491 Disulphide isomerase XI92_02040 PF08712 Scaffold protein Nfu/NifU N terminal XI92_02040 PF13769 Virulence factor XI92_02050 PF00436 Single-strand binding protein family XI92_02070 PF01381 Helix-turn-helix XI92_02120 PF00665 Integrase core domain XI92_02125 PF01695 IstB-like ATP binding protein XI92_02135 PF01609 Transposase DDE domain XI92_02145 PF01609 Transposase DDE domain XI92_02160 PF12848 ABC transporter XI92_02160 PF16326 ABC transporter C-terminal domain XI92_02160 PF00005 ABC transporter XI92_02165 PF01966 HD domain XI92_02180 PF18801 response regulator aspartate phosphatase H, N terminal XI92_02180 PF17874 MalT-like TPR region XI92_02190 PF00589 Phage integrase family XI92_02205 PF01925 Sulfite exporter TauE/SafE XI92_02230 PF04232 Stage V sporulation protein S (SpoVS) XI92_02265 PF04405 Domain of Unknown function (DUF542) XI92_02265 PF01814 Hemerythrin HHE cation binding domain XI92_02270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XI92_02270 PF04324 BFD-like [2Fe-2S] binding domain XI92_02270 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_02270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XI92_02270 PF18267 Rubredoxin NAD+ reductase C-terminal domain XI92_02275 PF00355 Rieske [2Fe-2S] domain XI92_02280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XI92_02285 PF01903 CbiX XI92_02300 PF07690 Major Facilitator Superfamily XI92_02305 PF02597 ThiS family XI92_02310 PF02391 MoaE protein XI92_02315 PF03454 MoeA C-terminal region (domain IV) XI92_02315 PF03453 MoeA N-terminal region (domain I and II) XI92_02315 PF00994 Probable molybdopterin binding domain XI92_02320 PF00899 ThiF family XI92_02325 PF06463 Molybdenum Cofactor Synthesis C XI92_02325 PF04055 Radical SAM superfamily XI92_02330 PF00325 Bacterial regulatory proteins, crp family XI92_02330 PF00027 Cyclic nucleotide-binding domain XI92_02335 PF02665 Nitrate reductase gamma subunit XI92_02340 PF02613 Nitrate reductase delta subunit XI92_02345 PF13247 4Fe-4S dicluster domain XI92_02345 PF14711 Respiratory nitrate reductase beta C-terminal XI92_02350 PF01568 Molydopterin dinucleotide binding domain XI92_02350 PF14710 Respiratory nitrate reductase alpha N-terminal XI92_02350 PF00384 Molybdopterin oxidoreductase XI92_02360 PF07726 ATPase family associated with various cellular activities (AAA) XI92_02360 PF17863 AAA lid domain XI92_02365 PF01882 Protein of unknown function DUF58 XI92_02370 PF01841 Transglutaminase-like superfamily XI92_02370 PF13559 Domain of unknown function (DUF4129) XI92_02370 PF11992 Domain of unknown function (DUF3488) XI92_02375 PF00255 Glutathione peroxidase XI92_02390 PF01613 Flavin reductase like domain XI92_02390 PF00258 Flavodoxin XI92_02405 PF04542 Sigma-70 region 2 XI92_02405 PF08281 Sigma-70, region 4 XI92_02415 PF08240 Alcohol dehydrogenase GroES-like domain XI92_02415 PF00107 Zinc-binding dehydrogenase XI92_02425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_02430 PF01261 Xylose isomerase-like TIM barrel XI92_02435 PF00271 Helicase conserved C-terminal domain XI92_02435 PF00270 DEAD/DEAH box helicase XI92_02445 PF01268 Formate--tetrahydrofolate ligase XI92_02450 PF01209 ubiE/COQ5 methyltransferase family XI92_02475 PF09579 Sporulation protein YtfJ (Spore_YtfJ) XI92_02565 PF12538 DNA transporter XI92_02565 PF01580 FtsK/SpoIIIE family XI92_02570 PF10140 WXG100 protein secretion system (Wss), protein YukC XI92_02575 PF08817 WXG100 protein secretion system (Wss), protein YukD XI92_02590 PF06013 Proteins of 100 residues with WXG XI92_02605 PF00583 Acetyltransferase (GNAT) family XI92_02635 PF00155 Aminotransferase class I and II XI92_02635 PF00392 Bacterial regulatory proteins, gntR family XI92_02640 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_02640 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_02645 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase XI92_02655 PF01168 Alanine racemase, N-terminal domain XI92_02655 PF00842 Alanine racemase, C-terminal domain XI92_02710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XI92_02710 PF13457 GW (Gly-Tryp) dipeptide domain XI92_02720 PF01548 Transposase XI92_02720 PF02371 Transposase IS116/IS110/IS902 family XI92_02750 PF01609 Transposase DDE domain XI92_02755 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_02805 PF00574 Clp protease XI92_02815 PF03354 Phage Terminase XI92_02865 PF00589 Phage integrase family XI92_02940 PF10549 ORF11CD3 domain XI92_02940 PF09669 Phage regulatory protein Rha (Phage_pRha) XI92_02975 PF00300 Histidine phosphatase superfamily (branch 1) XI92_02980 PF07454 Stage II sporulation protein P (SpoIIP) XI92_02985 PF01145 SPFH domain / Band 7 family XI92_02995 PF07690 Major Facilitator Superfamily XI92_03000 PF01425 Amidase XI92_03010 PF02557 D-alanyl-D-alanine carboxypeptidase XI92_03020 PF07454 Stage II sporulation protein P (SpoIIP) XI92_03040 PF01588 Putative tRNA binding domain XI92_03045 PF05525 Branched-chain amino acid transport protein XI92_03055 PF13333 Integrase core domain XI92_03055 PF00665 Integrase core domain XI92_03055 PF13276 HTH-like domain XI92_03070 PF03471 Transporter associated domain XI92_03070 PF00571 CBS domain XI92_03070 PF01595 Cyclin M transmembrane N-terminal domain XI92_03075 PF04306 Protein of unknown function (DUF456) XI92_03080 PF13460 NAD(P)H-binding XI92_03095 PF13396 Phospholipase_D-nuclease N-terminal XI92_03095 PF13091 PLD-like domain XI92_03100 PF03061 Thioesterase superfamily XI92_03105 PF09323 Domain of unknown function (DUF1980) XI92_03110 PF03773 Predicted permease XI92_03120 PF14667 Polysaccharide biosynthesis C-terminal domain XI92_03120 PF01943 Polysaccharide biosynthesis protein XI92_03125 PF09335 SNARE associated Golgi protein XI92_03130 PF00293 NUDIX domain XI92_03135 PF08757 CotH kinase protein XI92_03145 PF00300 Histidine phosphatase superfamily (branch 1) XI92_03155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_03160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_03170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XI92_03170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XI92_03175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XI92_03180 PF13460 NAD(P)H-binding XI92_03185 PF01609 Transposase DDE domain XI92_03190 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_03210 PF01297 Zinc-uptake complex component A periplasmic XI92_03215 PF00583 Acetyltransferase (GNAT) family XI92_03220 PF07683 Cobalamin synthesis protein cobW C-terminal domain XI92_03220 PF02492 CobW/HypB/UreG, nucleotide-binding domain XI92_03230 PF00248 Aldo/keto reductase family XI92_03235 PF13302 Acetyltransferase (GNAT) domain XI92_03240 PF01593 Flavin containing amine oxidoreductase XI92_03250 PF00296 Luciferase-like monooxygenase XI92_03260 PF13276 HTH-like domain XI92_03260 PF00665 Integrase core domain XI92_03260 PF13333 Integrase core domain XI92_03275 PF00210 Ferritin-like domain XI92_03300 PF02743 Cache domain XI92_03300 PF00672 HAMP domain XI92_03300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_03305 PF03193 RsgA GTPase XI92_03325 PF05656 Protein of unknown function (DUF805) XI92_03335 PF07690 Major Facilitator Superfamily XI92_03340 PF00248 Aldo/keto reductase family XI92_03345 PF01022 Bacterial regulatory protein, arsR family XI92_03350 PF00082 Subtilase family XI92_03355 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XI92_03355 PF18277 AbrB C-terminal domain XI92_03360 PF02687 FtsX-like permease family XI92_03365 PF02540 NAD synthase XI92_03370 PF00293 NUDIX domain XI92_03370 PF13344 Haloacid dehalogenase-like hydrolase XI92_03395 PF01734 Patatin-like phospholipase XI92_03405 PF00155 Aminotransferase class I and II XI92_03405 PF00392 Bacterial regulatory proteins, gntR family XI92_03410 PF01810 LysE type translocator XI92_03415 PF07690 Major Facilitator Superfamily XI92_03420 PF00269 Small, acid-soluble spore proteins, alpha/beta type XI92_03425 PF01261 Xylose isomerase-like TIM barrel XI92_03440 PF13193 AMP-binding enzyme C-terminal domain XI92_03440 PF00501 AMP-binding enzyme XI92_03450 PF00665 Integrase core domain XI92_03455 PF01695 IstB-like ATP binding protein XI92_03465 PF06276 Ferric iron reductase FhuF-like transporter XI92_03465 PF04183 IucA / IucC family XI92_03470 PF07282 Putative transposase DNA-binding domain XI92_03470 PF01385 Probable transposase XI92_03470 PF12323 Helix-turn-helix domain XI92_03480 PF00583 Acetyltransferase (GNAT) family XI92_03485 PF02308 MgtC family XI92_03495 PF01522 Polysaccharide deacetylase XI92_03500 PF16736 Single Cache-like XI92_03500 PF00989 PAS fold XI92_03500 PF00512 His Kinase A (phospho-acceptor) domain XI92_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_03505 PF00486 Transcriptional regulatory protein, C terminal XI92_03505 PF00072 Response regulator receiver domain XI92_03515 PF03816 Cell envelope-related transcriptional attenuator domain XI92_03530 PF08544 GHMP kinases C terminal XI92_03530 PF00288 GHMP kinases N terminal domain XI92_03535 PF00291 Pyridoxal-phosphate dependent enzyme XI92_03540 PF01842 ACT domain XI92_03540 PF03447 Homoserine dehydrogenase, NAD binding domain XI92_03540 PF00742 Homoserine dehydrogenase XI92_03545 PF02371 Transposase IS116/IS110/IS902 family XI92_03545 PF01548 Transposase XI92_03565 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain XI92_03565 PF01522 Polysaccharide deacetylase XI92_03570 PF04439 Streptomycin adenylyltransferase XI92_03575 PF00106 short chain dehydrogenase XI92_03580 PF16736 Single Cache-like XI92_03580 PF00989 PAS fold XI92_03580 PF00512 His Kinase A (phospho-acceptor) domain XI92_03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_03585 PF00072 Response regulator receiver domain XI92_03585 PF00486 Transcriptional regulatory protein, C terminal XI92_03590 PF00005 ABC transporter XI92_03590 PF00664 ABC transporter transmembrane region XI92_03600 PF01476 LysM domain XI92_03600 PF00877 NlpC/P60 family XI92_03615 PF00768 D-alanyl-D-alanine carboxypeptidase XI92_03615 PF07943 Penicillin-binding protein 5, C-terminal domain XI92_03620 PF02016 LD-carboxypeptidase N-terminal domain XI92_03620 PF17676 LD-carboxypeptidase C-terminal domain XI92_03645 PF00132 Bacterial transferase hexapeptide (six repeats) XI92_03650 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XI92_03655 PF00535 Glycosyl transferase family 2 XI92_03665 PF00005 ABC transporter XI92_03665 PF00664 ABC transporter transmembrane region XI92_03670 PF00005 ABC transporter XI92_03670 PF00664 ABC transporter transmembrane region XI92_03675 PF02322 Cytochrome bd terminal oxidase subunit II XI92_03680 PF01654 Cytochrome bd terminal oxidase subunit I XI92_03690 PF01047 MarR family XI92_03710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_03710 PF03466 LysR substrate binding domain XI92_03720 PF02653 Branched-chain amino acid transport system / permease component XI92_03725 PF00005 ABC transporter XI92_03730 PF00005 ABC transporter XI92_03730 PF12399 Branched-chain amino acid ATP-binding cassette transporter XI92_03740 PF07683 Cobalamin synthesis protein cobW C-terminal domain XI92_03740 PF02492 CobW/HypB/UreG, nucleotide-binding domain XI92_03745 PF01593 Flavin containing amine oxidoreductase XI92_03750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XI92_03750 PF00056 lactate/malate dehydrogenase, NAD binding domain XI92_03755 PF01594 AI-2E family transporter XI92_03770 PF00881 Nitroreductase family XI92_03775 PF01323 DSBA-like thioredoxin domain XI92_03780 PF02082 Transcriptional regulator XI92_03785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_03785 PF03466 LysR substrate binding domain XI92_03790 PF00892 EamA-like transporter family XI92_03795 PF07987 Domain of unkown function (DUF1775) XI92_03810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_03815 PF05525 Branched-chain amino acid transport protein XI92_03820 PF02525 Flavodoxin-like fold XI92_03845 PF07731 Multicopper oxidase XI92_03845 PF00394 Multicopper oxidase XI92_03845 PF07732 Multicopper oxidase XI92_03855 PF05195 Aminopeptidase P, N-terminal domain XI92_03855 PF00557 Metallopeptidase family M24 XI92_03860 PF05979 Bacterial protein of unknown function (DUF896) XI92_03865 PF07301 Protein of unknown function (DUF1453) XI92_03875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XI92_03880 PF02885 Glycosyl transferase family, helical bundle domain XI92_03880 PF00591 Glycosyl transferase family, a/b domain XI92_03880 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain XI92_03885 PF01773 Na+ dependent nucleoside transporter N-terminus XI92_03885 PF07662 Na+ dependent nucleoside transporter C-terminus XI92_03890 PF01791 DeoC/LacD family aldolase XI92_03895 PF04198 Putative sugar-binding domain XI92_03900 PF00440 Bacterial regulatory proteins, tetR family XI92_03910 PF01906 Putative heavy-metal-binding XI92_03920 PF05791 Bacillus haemolytic enterotoxin (HBL) XI92_03925 PF05791 Bacillus haemolytic enterotoxin (HBL) XI92_03935 PF13520 Amino acid permease XI92_03945 PF08546 Ketopantoate reductase PanE/ApbA C terminal XI92_03945 PF02558 Ketopantoate reductase PanE/ApbA XI92_03960 PF01566 Natural resistance-associated macrophage protein XI92_03965 PF13302 Acetyltransferase (GNAT) domain XI92_03970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_03975 PF01979 Amidohydrolase family XI92_03985 PF13673 Acetyltransferase (GNAT) domain XI92_03990 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain XI92_03990 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain XI92_03995 PF04397 LytTr DNA-binding domain XI92_03995 PF00072 Response regulator receiver domain XI92_04005 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XI92_04010 PF07690 Major Facilitator Superfamily XI92_04025 PF09587 Bacterial capsule synthesis protein PGA_cap XI92_04035 PF00291 Pyridoxal-phosphate dependent enzyme XI92_04035 PF00585 C-terminal regulatory domain of Threonine dehydratase XI92_04040 PF00920 Dehydratase family XI92_04045 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XI92_04045 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XI92_04055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XI92_04055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XI92_04055 PF00205 Thiamine pyrophosphate enzyme, central domain XI92_04060 PF01063 Amino-transferase class IV XI92_04070 PF01625 Peptide methionine sulfoxide reductase XI92_04090 PF04239 Protein of unknown function (DUF421) XI92_04100 PF00209 Sodium:neurotransmitter symporter family XI92_04120 PF00291 Pyridoxal-phosphate dependent enzyme XI92_04125 PF07690 Major Facilitator Superfamily XI92_04130 PF01926 50S ribosome-binding GTPase XI92_04130 PF13167 GTP-binding GTPase N-terminal XI92_04130 PF16360 GTP-binding GTPase Middle Region XI92_04135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XI92_04135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XI92_04140 PF07690 Major Facilitator Superfamily XI92_04145 PF07690 Major Facilitator Superfamily XI92_04150 PF03551 Transcriptional regulator PadR-like family XI92_04150 PF10400 Virulence activator alpha C-term XI92_04155 PF03976 Polyphosphate kinase 2 (PPK2) XI92_04165 PF07690 Major Facilitator Superfamily XI92_04170 PF09297 NADH pyrophosphatase zinc ribbon domain XI92_04170 PF00293 NUDIX domain XI92_04175 PF14158 YndJ-like protein XI92_04205 PF01381 Helix-turn-helix XI92_04220 PF03590 Aspartate-ammonia ligase XI92_04235 PF00271 Helicase conserved C-terminal domain XI92_04235 PF00176 SNF2 family N-terminal domain XI92_04235 PF04434 SWIM zinc finger XI92_04240 PF08664 YcbB domain XI92_04240 PF00072 Response regulator receiver domain XI92_04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_04250 PF03949 Malic enzyme, NAD binding domain XI92_04250 PF00390 Malic enzyme, N-terminal domain XI92_04255 PF00206 Lyase XI92_04255 PF10415 Fumarase C C-terminus XI92_04260 PF00375 Sodium:dicarboxylate symporter family XI92_04270 PF00696 Amino acid kinase family XI92_04275 PF13091 PLD-like domain XI92_04295 PF00005 ABC transporter XI92_04300 PF07730 Histidine kinase XI92_04300 PF13185 GAF domain XI92_04300 PF13492 GAF domain XI92_04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_04305 PF00072 Response regulator receiver domain XI92_04305 PF00196 Bacterial regulatory proteins, luxR family XI92_04330 PF04286 Protein of unknown function (DUF445) XI92_04335 PF00291 Pyridoxal-phosphate dependent enzyme XI92_04345 PF01790 Prolipoprotein diacylglyceryl transferase XI92_04350 PF00578 AhpC/TSA family XI92_04370 PF03575 Peptidase family S51 XI92_04375 PF01554 MatE XI92_04400 PF00206 Lyase XI92_04400 PF10415 Fumarase C C-terminus XI92_04410 PF13411 MerR HTH family regulatory protein XI92_04415 PF03553 Na+/H+ antiporter family XI92_04430 PF03773 Predicted permease XI92_04435 PF02492 CobW/HypB/UreG, nucleotide-binding domain XI92_04435 PF07683 Cobalamin synthesis protein cobW C-terminal domain XI92_04450 PF00392 Bacterial regulatory proteins, gntR family XI92_04450 PF07729 FCD domain XI92_04460 PF01545 Cation efflux family XI92_04460 PF16916 Dimerisation domain of Zinc Transporter XI92_04480 PF00733 Asparagine synthase XI92_04480 PF13537 Glutamine amidotransferase domain XI92_04490 PF01047 MarR family XI92_04500 PF02371 Transposase IS116/IS110/IS902 family XI92_04500 PF01548 Transposase XI92_04505 PF00561 alpha/beta hydrolase fold XI92_04515 PF00300 Histidine phosphatase superfamily (branch 1) XI92_04530 PF10787 Uncharacterised protein from bacillus cereus group XI92_04545 PF00528 Binding-protein-dependent transport system inner membrane component XI92_04580 PF08141 Small acid-soluble spore protein H family XI92_04620 PF02272 DHHA1 domain XI92_04620 PF01411 tRNA synthetases class II (A) XI92_04620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XI92_04625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XI92_04625 PF00460 Flagella basal body rod protein XI92_04630 PF00448 SRP54-type protein, GTPase domain XI92_04635 PF00771 FHIPEP family XI92_04640 PF01312 FlhB HrpN YscU SpaS Family XI92_04650 PF01313 Bacterial export proteins, family 3 XI92_04655 PF00813 FliP family XI92_04665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XI92_04665 PF04509 CheC-like family XI92_04670 PF02154 Flagellar motor switch protein FliM XI92_04670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XI92_04680 PF01464 Transglycosylase SLT domain XI92_04685 PF00700 Bacterial flagellin C-terminal helical region XI92_04685 PF00669 Bacterial flagellin N-terminal helical region XI92_04690 PF00700 Bacterial flagellin C-terminal helical region XI92_04690 PF00669 Bacterial flagellin N-terminal helical region XI92_04695 PF00669 Bacterial flagellin N-terminal helical region XI92_04695 PF00700 Bacterial flagellin C-terminal helical region XI92_04700 PF00700 Bacterial flagellin C-terminal helical region XI92_04700 PF00669 Bacterial flagellin N-terminal helical region XI92_04705 PF12181 DNA binding domain of the motility gene repressor (MogR) XI92_04710 PF00072 Response regulator receiver domain XI92_04710 PF01584 CheW-like domain XI92_04725 PF00460 Flagella basal body rod protein XI92_04725 PF07559 Flagellar basal body protein FlaE XI92_04725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XI92_04750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XI92_04750 PF18269 T3SS EscN ATPase C-terminal domain XI92_04750 PF02874 ATP synthase alpha/beta family, beta-barrel domain XI92_04760 PF14842 FliG N-terminal domain XI92_04760 PF14841 FliG middle domain XI92_04760 PF01706 FliG C-terminal domain XI92_04765 PF01514 Secretory protein of YscJ/FliF family XI92_04765 PF08345 Flagellar M-ring protein C-terminal XI92_04770 PF02049 Flagellar hook-basal body complex protein FliE XI92_04775 PF00460 Flagella basal body rod protein XI92_04775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XI92_04780 PF00460 Flagella basal body rod protein XI92_04800 PF00700 Bacterial flagellin C-terminal helical region XI92_04800 PF00669 Bacterial flagellin N-terminal helical region XI92_04805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XI92_04805 PF00460 Flagella basal body rod protein XI92_04825 PF01739 CheR methyltransferase, SAM binding domain XI92_04825 PF03705 CheR methyltransferase, all-alpha domain XI92_04840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XI92_04840 PF04509 CheC-like family XI92_04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_04845 PF01627 Hpt domain XI92_04845 PF02895 Signal transducing histidine kinase, homodimeric domain XI92_04845 PF01584 CheW-like domain XI92_04845 PF07194 P2 response regulator binding domain XI92_04850 PF00072 Response regulator receiver domain XI92_04855 PF00691 OmpA family XI92_04855 PF13677 Membrane MotB of proton-channel complex MotA/MotB XI92_04860 PF01618 MotA/TolQ/ExbB proton channel family XI92_04870 PF17209 Hfq protein XI92_04900 PF00881 Nitroreductase family XI92_04910 PF02698 DUF218 domain XI92_04915 PF04239 Protein of unknown function (DUF421) XI92_04925 PF13411 MerR HTH family regulatory protein XI92_04925 PF06445 GyrI-like small molecule binding domain XI92_04930 PF00753 Metallo-beta-lactamase superfamily XI92_04930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain XI92_04930 PF17770 Ribonuclease J C-terminal domain XI92_04935 PF00999 Sodium/hydrogen exchanger family XI92_04950 PF00474 Sodium:solute symporter family XI92_04970 PF01810 LysE type translocator XI92_04975 PF08892 YqcI/YcgG family XI92_04980 PF00313 'Cold-shock' DNA-binding domain XI92_05005 PF01263 Aldose 1-epimerase XI92_05010 PF13456 Reverse transcriptase-like XI92_05030 PF13673 Acetyltransferase (GNAT) domain XI92_05030 PF18014 Acetyltransferase (GNAT) domain XI92_05045 PF13439 Glycosyltransferase Family 4 XI92_05045 PF00534 Glycosyl transferases group 1 XI92_05050 PF00535 Glycosyl transferase family 2 XI92_05065 PF02397 Bacterial sugar transferase XI92_05075 PF02706 Chain length determinant protein XI92_05075 PF13807 G-rich domain on putative tyrosine kinase XI92_05090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XI92_05090 PF01367 5'-3' exonuclease, C-terminal SAM fold XI92_05095 PF00689 Cation transporting ATPase, C-terminus XI92_05095 PF00690 Cation transporter/ATPase, N-terminus XI92_05120 PF00581 Rhodanese-like domain XI92_05125 PF10752 Protein of unknown function (DUF2533) XI92_05130 PF00583 Acetyltransferase (GNAT) family XI92_05140 PF00350 Dynamin family XI92_05145 PF04235 Protein of unknown function (DUF418) XI92_05150 PF00860 Permease family XI92_05155 PF00156 Phosphoribosyl transferase domain XI92_05160 PF00557 Metallopeptidase family M24 XI92_05170 PF02074 Carboxypeptidase Taq (M32) metallopeptidase XI92_05175 PF13307 Helicase C-terminal domain XI92_05185 PF02926 THUMP domain XI92_05185 PF01170 Putative RNA methylase family UPF0020 XI92_05190 PF05103 DivIVA protein XI92_05195 PF06908 YspA SLOG family XI92_05225 PF10720 Protein of unknown function (DUF2515) XI92_05230 PF03838 Recombination protein U XI92_05235 PF00912 Transglycosylase XI92_05235 PF00905 Penicillin binding protein transpeptidase domain XI92_05245 PF00730 HhH-GPD superfamily base excision DNA repair protein XI92_05245 PF00633 Helix-hairpin-helix motif XI92_05245 PF10576 Iron-sulfur binding domain of endonuclease III XI92_05250 PF07261 Replication initiation and membrane attachment XI92_05255 PF00155 Aminotransferase class I and II XI92_05265 PF14084 Protein of unknown function (DUF4264) XI92_05270 PF13307 Helicase C-terminal domain XI92_05270 PF00929 Exonuclease XI92_05270 PF04851 Type III restriction enzyme, res subunit XI92_05275 PF02261 Aspartate decarboxylase XI92_05280 PF02569 Pantoate-beta-alanine ligase XI92_05300 PF03099 Biotin/lipoate A/B protein ligase family XI92_05300 PF08279 HTH domain XI92_05300 PF02237 Biotin protein ligase C terminal domain XI92_05305 PF12627 Probable RNA and SrmB- binding site of polymerase A XI92_05305 PF01743 Poly A polymerase head domain XI92_05305 PF13735 tRNA nucleotidyltransferase domain 2 putative XI92_05310 PF00534 Glycosyl transferases group 1 XI92_05310 PF13439 Glycosyltransferase Family 4 XI92_05315 PF02585 GlcNAc-PI de-N-acetylase XI92_05320 PF02142 MGS-like domain XI92_05325 PF05173 Dihydrodipicolinate reductase, C-terminus XI92_05325 PF01113 Dihydrodipicolinate reductase, N-terminus XI92_05330 PF03819 MazG nucleotide pyrophosphohydrolase domain XI92_05335 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_05335 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_05345 PF13333 Integrase core domain XI92_05345 PF00665 Integrase core domain XI92_05345 PF13276 HTH-like domain XI92_05355 PF04298 Putative neutral zinc metallopeptidase XI92_05360 PF09577 Sporulation protein YpjB (SpoYpjB) XI92_05370 PF07187 Protein of unknown function (DUF1405) XI92_05375 PF00032 Cytochrome b(C-terminal)/b6/petD XI92_05375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XI92_05380 PF00033 Cytochrome b/b6/petB XI92_05385 PF00355 Rieske [2Fe-2S] domain XI92_05390 PF10673 Protein of unknown function (DUF2487) XI92_05395 PF08858 IDEAL domain XI92_05395 PF08864 UPF0302 domain XI92_05405 PF00155 Aminotransferase class I and II XI92_05415 PF01761 3-dehydroquinate synthase XI92_05420 PF01264 Chorismate synthase XI92_05425 PF00334 Nucleoside diphosphate kinase XI92_05430 PF00348 Polyprenyl synthetase XI92_05435 PF01209 ubiE/COQ5 methyltransferase family XI92_05440 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 XI92_05445 PF01227 GTP cyclohydrolase I XI92_05450 PF00216 Bacterial DNA-binding protein XI92_05455 PF09547 Stage IV sporulation protein A (spore_IV_A) XI92_05465 PF10966 Protein of unknown function (DUF2768) XI92_05475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XI92_05475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XI92_05480 PF01926 50S ribosome-binding GTPase XI92_05480 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XI92_05490 PF14045 YIEGIA protein XI92_05500 PF14140 YpzI-like protein XI92_05505 PF01070 FMN-dependent dehydrogenase XI92_05510 PF00575 S1 RNA binding domain XI92_05515 PF02224 Cytidylate kinase XI92_05525 PF00710 Asparaginase, N-terminal XI92_05525 PF17763 Glutaminase/Asparaginase C-terminal domain XI92_05550 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XI92_05550 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XI92_05555 PF05389 Negative regulator of genetic competence (MecA) XI92_05560 PF13411 MerR HTH family regulatory protein XI92_05565 PF00149 Calcineurin-like phosphoesterase XI92_05575 PF02517 CPBP intramembrane metalloprotease XI92_05580 PF00270 DEAD/DEAH box helicase XI92_05580 PF00271 Helicase conserved C-terminal domain XI92_05595 PF12822 ECF transporter, substrate-specific component XI92_05610 PF01923 Cobalamin adenosyltransferase XI92_05620 PF00072 Response regulator receiver domain XI92_05620 PF00486 Transcriptional regulatory protein, C terminal XI92_05625 PF01578 Cytochrome C assembly protein XI92_05630 PF05140 ResB-like family XI92_05635 PF00578 AhpC/TSA family XI92_05640 PF01479 S4 domain XI92_05640 PF00849 RNA pseudouridylate synthase XI92_05645 PF07670 Nucleoside recognition XI92_05650 PF07670 Nucleoside recognition XI92_05655 PF07943 Penicillin-binding protein 5, C-terminal domain XI92_05655 PF00768 D-alanyl-D-alanine carboxypeptidase XI92_05660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XI92_05660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XI92_05675 PF09924 Uncharacterised conserved protein (DUF2156) XI92_05675 PF03706 Lysylphosphatidylglycerol synthase TM region XI92_05685 PF01048 Phosphorylase superfamily XI92_05690 PF00989 PAS fold XI92_05690 PF00512 His Kinase A (phospho-acceptor) domain XI92_05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_05690 PF16736 Single Cache-like XI92_05695 PF00589 Phage integrase family XI92_05705 PF01904 Protein of unknown function DUF72 XI92_05710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_05710 PF00512 His Kinase A (phospho-acceptor) domain XI92_05710 PF00989 PAS fold XI92_05725 PF00912 Transglycosylase XI92_05725 PF00905 Penicillin binding protein transpeptidase domain XI92_05730 PF01865 Protein of unknown function DUF47 XI92_05735 PF01384 Phosphate transporter family XI92_05740 PF01925 Sulfite exporter TauE/SafE XI92_05760 PF00175 Oxidoreductase NAD-binding domain XI92_05760 PF00970 Oxidoreductase FAD-binding domain XI92_05760 PF00042 Globin XI92_05785 PF01209 ubiE/COQ5 methyltransferase family XI92_05795 PF05525 Branched-chain amino acid transport protein XI92_05805 PF00072 Response regulator receiver domain XI92_05805 PF00196 Bacterial regulatory proteins, luxR family XI92_05810 PF00672 HAMP domain XI92_05810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_05810 PF07730 Histidine kinase XI92_05815 PF09922 Cell wall-active antibiotics response 4TMS YvqF XI92_05830 PF03553 Na+/H+ antiporter family XI92_05850 PF00209 Sodium:neurotransmitter symporter family XI92_05870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XI92_05880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XI92_05880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XI92_05890 PF01747 ATP-sulfurylase XI92_05890 PF14306 PUA-like domain XI92_05895 PF01507 Phosphoadenosine phosphosulfate reductase family XI92_05905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XI92_05905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XI92_05915 PF00884 Sulfatase XI92_05920 PF01066 CDP-alcohol phosphatidyltransferase XI92_05925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XI92_05925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XI92_05935 PF02811 PHP domain XI92_05940 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XI92_05945 PF01502 Phosphoribosyl-AMP cyclohydrolase XI92_05950 PF00977 Histidine biosynthesis protein XI92_05955 PF00977 Histidine biosynthesis protein XI92_05960 PF00117 Glutamine amidotransferase class-I XI92_05965 PF00475 Imidazoleglycerol-phosphate dehydratase XI92_05970 PF00815 Histidinol dehydrogenase XI92_05975 PF01634 ATP phosphoribosyltransferase XI92_05980 PF13393 Histidyl-tRNA synthetase XI92_05985 PF00694 Aconitase C-terminal domain XI92_05990 PF00330 Aconitase family (aconitate hydratase) XI92_05995 PF00180 Isocitrate/isopropylmalate dehydrogenase XI92_06000 PF08502 LeuA allosteric (dimerisation) domain XI92_06000 PF00682 HMGL-like XI92_06005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XI92_06005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XI92_06010 PF01842 ACT domain XI92_06010 PF10369 Small subunit of acetolactate synthase XI92_06015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XI92_06015 PF00205 Thiamine pyrophosphate enzyme, central domain XI92_06015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XI92_06020 PF01063 Amino-transferase class IV XI92_06035 PF03698 Uncharacterised protein family (UPF0180) XI92_06050 PF09579 Sporulation protein YtfJ (Spore_YtfJ) XI92_06060 PF02386 Cation transport protein XI92_06065 PF00375 Sodium:dicarboxylate symporter family XI92_06075 PF01047 MarR family XI92_06085 PF02673 Bacitracin resistance protein BacA XI92_06090 PF01554 MatE XI92_06110 PF01636 Phosphotransferase enzyme family XI92_06125 PF00258 Flavodoxin XI92_06135 PF01546 Peptidase family M20/M25/M40 XI92_06135 PF07687 Peptidase dimerisation domain XI92_06145 PF00501 AMP-binding enzyme XI92_06145 PF13193 AMP-binding enzyme C-terminal domain XI92_06150 PF03062 MBOAT, membrane-bound O-acyltransferase family XI92_06155 PF00550 Phosphopantetheine attachment site XI92_06160 PF04914 DltD protein XI92_06165 PF03060 Nitronate monooxygenase XI92_06170 PF17676 LD-carboxypeptidase C-terminal domain XI92_06170 PF02016 LD-carboxypeptidase N-terminal domain XI92_06180 PF00857 Isochorismatase family XI92_06190 PF01037 Lrp/AsnC ligand binding domain XI92_06210 PF00005 ABC transporter XI92_06220 PF00005 ABC transporter XI92_06225 PF00392 Bacterial regulatory proteins, gntR family XI92_06240 PF08343 Ribonucleotide reductase N-terminal XI92_06240 PF00317 Ribonucleotide reductase, all-alpha domain XI92_06240 PF02867 Ribonucleotide reductase, barrel domain XI92_06245 PF07972 NrdI Flavodoxin like XI92_06285 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) XI92_06290 PF14489 QueF-like protein XI92_06295 PF04055 Radical SAM superfamily XI92_06300 PF01242 6-pyruvoyl tetrahydropterin synthase XI92_06305 PF06508 Queuosine biosynthesis protein QueC XI92_06310 PF00989 PAS fold XI92_06310 PF00512 His Kinase A (phospho-acceptor) domain XI92_06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_06310 PF13188 PAS domain XI92_06310 PF13426 PAS domain XI92_06320 PF12867 DinB superfamily XI92_06330 PF01047 MarR family XI92_06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_06335 PF00512 His Kinase A (phospho-acceptor) domain XI92_06335 PF02743 Cache domain XI92_06340 PF09388 Spo0E like sporulation regulatory protein XI92_06345 PF04748 Divergent polysaccharide deacetylase XI92_06355 PF00596 Class II Aldolase and Adducin N-terminal domain XI92_06370 PF08220 DeoR-like helix-turn-helix domain XI92_06370 PF00455 DeoR C terminal sensor domain XI92_06380 PF00266 Aminotransferase class-V XI92_06385 PF13419 Haloacid dehalogenase-like hydrolase XI92_06390 PF00528 Binding-protein-dependent transport system inner membrane component XI92_06395 PF08402 TOBE domain XI92_06395 PF00005 ABC transporter XI92_06415 PF02386 Cation transport protein XI92_06425 PF00561 alpha/beta hydrolase fold XI92_06450 PF01575 MaoC like domain XI92_06455 PF00269 Small, acid-soluble spore proteins, alpha/beta type XI92_06460 PF02386 Cation transport protein XI92_06465 PF03741 Integral membrane protein TerC family XI92_06470 PF01226 Formate/nitrite transporter XI92_06480 PF06750 Bacterial Peptidase A24 N-terminal domain XI92_06480 PF01478 Type IV leader peptidase family XI92_06485 PF02589 LUD domain XI92_06490 PF13183 4Fe-4S dicluster domain XI92_06490 PF11870 Domain of unknown function (DUF3390) XI92_06490 PF02589 LUD domain XI92_06495 PF02754 Cysteine-rich domain XI92_06500 PF07729 FCD domain XI92_06500 PF00392 Bacterial regulatory proteins, gntR family XI92_06505 PF18698 Histidine kinase sensor domain XI92_06505 PF00672 HAMP domain XI92_06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_06505 PF00512 His Kinase A (phospho-acceptor) domain XI92_06505 PF00989 PAS fold XI92_06510 PF00486 Transcriptional regulatory protein, C terminal XI92_06510 PF00072 Response regulator receiver domain XI92_06520 PF13556 PucR C-terminal helix-turn-helix domain XI92_06520 PF17853 GGDEF-like domain XI92_06520 PF05651 Putative sugar diacid recognition XI92_06525 PF01565 FAD binding domain XI92_06525 PF02913 FAD linked oxidases, C-terminal domain XI92_06530 PF13183 4Fe-4S dicluster domain XI92_06530 PF02754 Cysteine-rich domain XI92_06535 PF00188 Cysteine-rich secretory protein family XI92_06545 PF01479 S4 domain XI92_06545 PF00849 RNA pseudouridylate synthase XI92_06555 PF03176 MMPL family XI92_06565 PF13416 Bacterial extracellular solute-binding protein XI92_06570 PF00528 Binding-protein-dependent transport system inner membrane component XI92_06575 PF00528 Binding-protein-dependent transport system inner membrane component XI92_06580 PF00005 ABC transporter XI92_06580 PF08402 TOBE domain XI92_06585 PF00171 Aldehyde dehydrogenase family XI92_06590 PF05547 Immune inhibitor A peptidase M6 XI92_06600 PF08671 Anti-repressor SinI XI92_06600 PF01381 Helix-turn-helix XI92_06605 PF12389 Camelysin metallo-endopeptidase XI92_06615 PF12389 Camelysin metallo-endopeptidase XI92_06625 PF07943 Penicillin-binding protein 5, C-terminal domain XI92_06625 PF00768 D-alanyl-D-alanine carboxypeptidase XI92_06635 PF13649 Methyltransferase domain XI92_06660 PF13732 Domain of unknown function (DUF4162) XI92_06660 PF00005 ABC transporter XI92_06675 PF13333 Integrase core domain XI92_06675 PF00665 Integrase core domain XI92_06710 PF01381 Helix-turn-helix XI92_06715 PF02779 Transketolase, pyrimidine binding domain XI92_06715 PF00676 Dehydrogenase E1 component XI92_06715 PF16870 2-oxoglutarate dehydrogenase C-terminal XI92_06720 PF02817 e3 binding domain XI92_06720 PF00364 Biotin-requiring enzyme XI92_06720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XI92_06735 PF00881 Nitroreductase family XI92_06740 PF01209 ubiE/COQ5 methyltransferase family XI92_06745 PF13276 HTH-like domain XI92_06745 PF13333 Integrase core domain XI92_06745 PF00665 Integrase core domain XI92_06765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XI92_06765 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_06790 PF10042 Uncharacterized conserved protein (DUF2278) XI92_06795 PF02652 L-lactate permease XI92_06805 PF00290 Tryptophan synthase alpha chain XI92_06810 PF00291 Pyridoxal-phosphate dependent enzyme XI92_06815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XI92_06820 PF00218 Indole-3-glycerol phosphate synthase XI92_06825 PF00591 Glycosyl transferase family, a/b domain XI92_06825 PF02885 Glycosyl transferase family, helical bundle domain XI92_06830 PF00591 Glycosyl transferase family, a/b domain XI92_06830 PF00117 Glutamine amidotransferase class-I XI92_06830 PF02885 Glycosyl transferase family, helical bundle domain XI92_06845 PF00474 Sodium:solute symporter family XI92_06850 PF02368 Bacterial Ig-like domain (group 2) XI92_06870 PF00756 Putative esterase XI92_06880 PF13673 Acetyltransferase (GNAT) domain XI92_06885 PF13361 UvrD-like helicase C-terminal domain XI92_06885 PF00580 UvrD/REP helicase N-terminal domain XI92_06905 PF07098 Protein of unknown function (DUF1360) XI92_06925 PF04321 RmlD substrate binding domain XI92_06930 PF16363 GDP-mannose 4,6 dehydratase XI92_06935 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XI92_06940 PF00483 Nucleotidyl transferase XI92_06960 PF00535 Glycosyl transferase family 2 XI92_06960 PF13181 Tetratricopeptide repeat XI92_06970 PF05711 Macrocin-O-methyltransferase (TylF) XI92_06975 PF08241 Methyltransferase domain XI92_06980 PF00535 Glycosyl transferase family 2 XI92_06985 PF01098 Cell cycle protein XI92_06990 PF00149 Calcineurin-like phosphoesterase XI92_07000 PF00849 RNA pseudouridylate synthase XI92_07005 PF01513 ATP-NAD kinase XI92_07010 PF04607 Region found in RelA / SpoT proteins XI92_07020 PF01928 CYTH domain XI92_07025 PF01152 Bacterial-like globin XI92_07040 PF08439 Oligopeptidase F XI92_07040 PF01432 Peptidase family M3 XI92_07050 PF13396 Phospholipase_D-nuclease N-terminal XI92_07050 PF13091 PLD-like domain XI92_07055 PF05389 Negative regulator of genetic competence (MecA) XI92_07060 PF03741 Integral membrane protein TerC family XI92_07065 PF03960 ArsC family XI92_07080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_07090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XI92_07090 PF00005 ABC transporter XI92_07095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XI92_07095 PF00005 ABC transporter XI92_07100 PF00528 Binding-protein-dependent transport system inner membrane component XI92_07100 PF12911 N-terminal TM domain of oligopeptide transport permease C XI92_07105 PF00528 Binding-protein-dependent transport system inner membrane component XI92_07110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_07125 PF00579 tRNA synthetases class I (W and Y) XI92_07135 PF12227 Protein of unknown function (DUF3603) XI92_07140 PF10026 Predicted Zn-dependent protease (DUF2268) XI92_07145 PF00109 Beta-ketoacyl synthase, N-terminal domain XI92_07145 PF02801 Beta-ketoacyl synthase, C-terminal domain XI92_07150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XI92_07150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XI92_07155 PF10815 ComZ XI92_07175 PF02861 Clp amino terminal domain, pathogenicity island component XI92_07175 PF00004 ATPase family associated with various cellular activities (AAA) XI92_07175 PF10431 C-terminal, D2-small domain, of ClpB protein XI92_07175 PF17871 AAA lid domain XI92_07175 PF07724 AAA domain (Cdc48 subfamily) XI92_07180 PF14168 YjzC-like protein XI92_07200 PF12758 Protein of unknown function (DUF3813) XI92_07205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_07205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_07230 PF17783 CvfB-like winged helix domain XI92_07230 PF13509 S1 domain XI92_07235 PF04461 Protein of unknown function (DUF520) XI92_07245 PF00128 Alpha amylase, catalytic domain XI92_07250 PF00909 Ammonium Transporter Family XI92_07255 PF06803 Protein of unknown function (DUF1232) XI92_07280 PF00689 Cation transporting ATPase, C-terminus XI92_07280 PF00690 Cation transporter/ATPase, N-terminus XI92_07290 PF06628 Catalase-related immune-responsive XI92_07290 PF00199 Catalase XI92_07300 PF00733 Asparagine synthase XI92_07300 PF13537 Glutamine amidotransferase domain XI92_07325 PF01471 Putative peptidoglycan binding domain XI92_07325 PF01476 LysM domain XI92_07325 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_07330 PF05105 Bacteriophage holin family XI92_07400 PF01548 Transposase XI92_07400 PF02371 Transposase IS116/IS110/IS902 family XI92_07435 PF02371 Transposase IS116/IS110/IS902 family XI92_07435 PF01548 Transposase XI92_07455 PF03838 Recombination protein U XI92_07550 PF00717 Peptidase S24-like XI92_07550 PF01726 LexA DNA binding domain XI92_07560 PF02796 Helix-turn-helix domain of resolvase XI92_07560 PF00239 Resolvase, N terminal domain XI92_07565 PF00733 Asparagine synthase XI92_07565 PF13537 Glutamine amidotransferase domain XI92_07580 PF00202 Aminotransferase class-III XI92_07590 PF01557 Fumarylacetoacetate (FAA) hydrolase family XI92_07595 PF09388 Spo0E like sporulation regulatory protein XI92_07600 PF10676 Spore germination protein gerPA/gerPF XI92_07605 PF10803 Spore germination GerPB XI92_07610 PF10737 Spore germination protein GerPC XI92_07620 PF10970 Spore germination protein GerPE XI92_07625 PF10676 Spore germination protein gerPA/gerPF XI92_07640 PF12705 PD-(D/E)XK nuclease superfamily XI92_07640 PF13361 UvrD-like helicase C-terminal domain XI92_07645 PF10502 Signal peptidase, peptidase S26 XI92_07650 PF09335 SNARE associated Golgi protein XI92_07670 PF00313 'Cold-shock' DNA-binding domain XI92_07685 PF00463 Isocitrate lyase family XI92_07690 PF01274 Malate synthase XI92_07700 PF00395 S-layer homology domain XI92_07700 PF00331 Glycosyl hydrolase family 10 XI92_07700 PF02018 Carbohydrate binding domain XI92_07700 PF06452 Carbohydrate family 9 binding domain-like XI92_07705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_07705 PF00672 HAMP domain XI92_07705 PF02743 Cache domain XI92_07710 PF01435 Peptidase family M48 XI92_07710 PF16491 CAAX prenyl protease N-terminal, five membrane helices XI92_07730 PF00072 Response regulator receiver domain XI92_07730 PF00486 Transcriptional regulatory protein, C terminal XI92_07745 PF12833 Helix-turn-helix domain XI92_07745 PF06445 GyrI-like small molecule binding domain XI92_07750 PF04542 Sigma-70 region 2 XI92_07750 PF08281 Sigma-70, region 4 XI92_07760 PF01966 HD domain XI92_07765 PF00149 Calcineurin-like phosphoesterase XI92_07770 PF12146 Serine aminopeptidase, S33 XI92_07780 PF07968 Leukocidin/Hemolysin toxin family XI92_07855 PF12857 TOBE-like domain XI92_07855 PF17850 CysA C-terminal regulatory domain XI92_07855 PF00005 ABC transporter XI92_07860 PF00528 Binding-protein-dependent transport system inner membrane component XI92_07865 PF00528 Binding-protein-dependent transport system inner membrane component XI92_07875 PF00395 S-layer homology domain XI92_07875 PF01520 N-acetylmuramoyl-L-alanine amidase XI92_07880 PF13193 AMP-binding enzyme C-terminal domain XI92_07880 PF00501 AMP-binding enzyme XI92_07895 PF10437 Bacterial lipoate protein ligase C-terminus XI92_07895 PF03099 Biotin/lipoate A/B protein ligase family XI92_07900 PF12706 Beta-lactamase superfamily domain XI92_07905 PF14149 YhfH-like protein XI92_07910 PF00356 Bacterial regulatory proteins, lacI family XI92_07915 PF13302 Acetyltransferase (GNAT) domain XI92_07950 PF00440 Bacterial regulatory proteins, tetR family XI92_07950 PF17932 Tetracyclin repressor-like, C-terminal domain XI92_07960 PF03965 Penicillinase repressor XI92_07995 PF01208 Uroporphyrinogen decarboxylase (URO-D) XI92_08000 PF00905 Penicillin binding protein transpeptidase domain XI92_08000 PF00912 Transglycosylase XI92_08005 PF03992 Antibiotic biosynthesis monooxygenase XI92_08010 PF03703 Bacterial PH domain XI92_08015 PF03703 Bacterial PH domain XI92_08020 PF00892 EamA-like transporter family XI92_08030 PF10014 2OG-Fe dioxygenase XI92_08055 PF03703 Bacterial PH domain XI92_08060 PF03703 Bacterial PH domain XI92_08070 PF17934 Tetracyclin repressor-like, C-terminal domain XI92_08070 PF00440 Bacterial regulatory proteins, tetR family XI92_08075 PF12787 EcsC protein family XI92_08080 PF05975 Bacterial ABC transporter protein EcsB XI92_08085 PF00005 ABC transporter XI92_08090 PF01230 HIT domain XI92_08095 PF12732 YtxH-like protein XI92_08100 PF01047 MarR family XI92_08125 PF13538 UvrD-like helicase C-terminal domain XI92_08130 PF01098 Cell cycle protein XI92_08140 PF04542 Sigma-70 region 2 XI92_08140 PF08281 Sigma-70, region 4 XI92_08155 PF01266 FAD dependent oxidoreductase XI92_08155 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XI92_08160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XI92_08160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XI92_08165 PF00230 Major intrinsic protein XI92_08170 PF04309 Glycerol-3-phosphate responsive antiterminator XI92_08175 PF01381 Helix-turn-helix XI92_08180 PF00190 Cupin XI92_08190 PF14147 Sporulation protein YhaL XI92_08205 PF18801 response regulator aspartate phosphatase H, N terminal XI92_08205 PF17874 MalT-like TPR region XI92_08210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_08215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_08235 PF01966 HD domain XI92_08235 PF01336 OB-fold nucleic acid binding domain XI92_08240 PF13514 AAA domain XI92_08245 PF00149 Calcineurin-like phosphoesterase XI92_08260 PF11121 Protein of unknown function (DUF2639) XI92_08265 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family XI92_08270 PF08240 Alcohol dehydrogenase GroES-like domain XI92_08270 PF00107 Zinc-binding dehydrogenase XI92_08275 PF07729 FCD domain XI92_08275 PF00392 Bacterial regulatory proteins, gntR family XI92_08290 PF01906 Putative heavy-metal-binding XI92_08315 PF00672 HAMP domain XI92_08315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XI92_08315 PF01627 Hpt domain XI92_08315 PF00512 His Kinase A (phospho-acceptor) domain XI92_08315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_08315 PF00072 Response regulator receiver domain XI92_08320 PF01739 CheR methyltransferase, SAM binding domain XI92_08320 PF03705 CheR methyltransferase, all-alpha domain XI92_08325 PF13426 PAS domain XI92_08325 PF07228 Stage II sporulation protein E (SpoIIE) XI92_08335 PF04545 Sigma-70, region 4 XI92_08335 PF04542 Sigma-70 region 2 XI92_08335 PF04539 Sigma-70 region 3 XI92_08340 PF13581 Histidine kinase-like ATPase domain XI92_08345 PF01740 STAS domain XI92_08365 PF11181 Heat induced stress protein YflT XI92_08405 PF00395 S-layer homology domain XI92_08435 PF00665 Integrase core domain XI92_08440 PF01695 IstB-like ATP binding protein XI92_08455 PF02733 Dak1 domain XI92_08465 PF02733 Dak1 domain XI92_08470 PF01810 LysE type translocator XI92_08495 PF07690 Major Facilitator Superfamily XI92_08500 PF13333 Integrase core domain XI92_08500 PF13276 HTH-like domain XI92_08500 PF00665 Integrase core domain XI92_08515 PF01066 CDP-alcohol phosphatidyltransferase XI92_08570 PF00109 Beta-ketoacyl synthase, N-terminal domain XI92_08570 PF02801 Beta-ketoacyl synthase, C-terminal domain XI92_08585 PF01037 Lrp/AsnC ligand binding domain XI92_08590 PF12706 Beta-lactamase superfamily domain XI92_08615 PF01609 Transposase DDE domain XI92_08620 PF13026 Protein of unknown function (DUF3887) XI92_08620 PF12146 Serine aminopeptidase, S33 XI92_08630 PF01609 Transposase DDE domain XI92_08635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_08645 PF01609 Transposase DDE domain XI92_08660 PF07298 NnrU protein XI92_08675 PF13700 Domain of unknown function (DUF4158) XI92_08675 PF01526 Tn3 transposase DDE domain XI92_08685 PF06013 Proteins of 100 residues with WXG XI92_08705 PF13276 HTH-like domain XI92_08705 PF00665 Integrase core domain XI92_08705 PF13333 Integrase core domain XI92_08735 PF07690 Major Facilitator Superfamily XI92_08745 PF04012 PspA/IM30 family XI92_08755 PF03606 C4-dicarboxylate anaerobic carrier XI92_08760 PF07722 Peptidase C26 XI92_08765 PF02954 Bacterial regulatory protein, Fis family XI92_08765 PF00158 Sigma-54 interaction domain XI92_08765 PF13426 PAS domain XI92_08775 PF01925 Sulfite exporter TauE/SafE XI92_08785 PF03796 DnaB-like helicase C terminal domain XI92_08785 PF00772 DnaB-like helicase N terminal domain XI92_08795 PF01494 FAD binding domain XI92_08800 PF03796 DnaB-like helicase C terminal domain XI92_08800 PF00772 DnaB-like helicase N terminal domain XI92_08810 PF08463 EcoEI R protein C-terminal XI92_08810 PF00271 Helicase conserved C-terminal domain XI92_08810 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) XI92_08810 PF04851 Type III restriction enzyme, res subunit XI92_08815 PF00293 NUDIX domain XI92_08820 PF03401 Tripartite tricarboxylate transporter family receptor XI92_08825 PF12431 Transcriptional regulator XI92_08825 PF08279 HTH domain XI92_08825 PF00072 Response regulator receiver domain XI92_08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_08830 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain XI92_08835 PF00083 Sugar (and other) transporter XI92_08890 PF14436 Bacterial EndoU nuclease XI92_08890 PF04740 LXG domain of WXG superfamily XI92_08905 PF06013 Proteins of 100 residues with WXG XI92_08915 PF13276 HTH-like domain XI92_08915 PF13333 Integrase core domain XI92_08915 PF00665 Integrase core domain XI92_08935 PF16123 Hydroxyacylglutathione hydrolase C-terminus XI92_08935 PF00753 Metallo-beta-lactamase superfamily XI92_08950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XI92_08950 PF00005 ABC transporter XI92_08955 PF00005 ABC transporter XI92_08955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XI92_08960 PF00528 Binding-protein-dependent transport system inner membrane component XI92_08960 PF12911 N-terminal TM domain of oligopeptide transport permease C XI92_08965 PF00528 Binding-protein-dependent transport system inner membrane component XI92_08970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_08980 PF02423 Ornithine cyclodeaminase/mu-crystallin family XI92_08985 PF05544 Proline racemase XI92_08990 PF11121 Protein of unknown function (DUF2639) XI92_09000 PF00395 S-layer homology domain XI92_09000 PF01520 N-acetylmuramoyl-L-alanine amidase XI92_09005 PF05343 M42 glutamyl aminopeptidase XI92_09025 PF00378 Enoyl-CoA hydratase/isomerase XI92_09045 PF01943 Polysaccharide biosynthesis protein XI92_09045 PF14667 Polysaccharide biosynthesis C-terminal domain XI92_09050 PF00916 Sulfate permease family XI92_09050 PF01740 STAS domain XI92_09065 PF00501 AMP-binding enzyme XI92_09065 PF13193 AMP-binding enzyme C-terminal domain XI92_09070 PF04055 Radical SAM superfamily XI92_09075 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_09075 PF01471 Putative peptidoglycan binding domain XI92_09090 PF02245 Methylpurine-DNA glycosylase (MPG) XI92_09100 PF03306 Alpha-acetolactate decarboxylase XI92_09105 PF00205 Thiamine pyrophosphate enzyme, central domain XI92_09105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XI92_09105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XI92_09120 PF06133 Control of competence regulator ComK, YlbF/YmcA XI92_09125 PF04286 Protein of unknown function (DUF445) XI92_09135 PF14398 YheC/D like ATP-grasp XI92_09145 PF00269 Small, acid-soluble spore proteins, alpha/beta type XI92_09150 PF00005 ABC transporter XI92_09155 PF00528 Binding-protein-dependent transport system inner membrane component XI92_09160 PF00497 Bacterial extracellular solute-binding proteins, family 3 XI92_09165 PF00664 ABC transporter transmembrane region XI92_09165 PF00005 ABC transporter XI92_09170 PF00005 ABC transporter XI92_09170 PF00664 ABC transporter transmembrane region XI92_09180 PF00171 Aldehyde dehydrogenase family XI92_09190 PF01177 Asp/Glu/Hydantoin racemase XI92_09195 PF13520 Amino acid permease XI92_09210 PF01965 DJ-1/PfpI family XI92_09220 PF07690 Major Facilitator Superfamily XI92_09225 PF12793 Sugar transport-related sRNA regulator N-term XI92_09225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_09230 PF02525 Flavodoxin-like fold XI92_09240 PF01638 HxlR-like helix-turn-helix XI92_09245 PF07690 Major Facilitator Superfamily XI92_09250 PF00440 Bacterial regulatory proteins, tetR family XI92_09250 PF17934 Tetracyclin repressor-like, C-terminal domain XI92_09260 PF00893 Small Multidrug Resistance protein XI92_09265 PF13411 MerR HTH family regulatory protein XI92_09270 PF00106 short chain dehydrogenase XI92_09275 PF00206 Lyase XI92_09275 PF00583 Acetyltransferase (GNAT) family XI92_09275 PF14698 Argininosuccinate lyase C-terminal XI92_09280 PF01037 Lrp/AsnC ligand binding domain XI92_09285 PF00892 EamA-like transporter family XI92_09300 PF07681 DoxX XI92_09310 PF02378 Phosphotransferase system, EIIC XI92_09310 PF00367 phosphotransferase system, EIIB XI92_09315 PF13580 SIS domain XI92_09320 PF01418 Helix-turn-helix domain, rpiR family XI92_09320 PF01380 SIS domain XI92_09330 PF00999 Sodium/hydrogen exchanger family XI92_09335 PF13520 Amino acid permease XI92_09370 PF09335 SNARE associated Golgi protein XI92_09380 PF02735 Ku70/Ku80 beta-barrel domain XI92_09395 PF11007 Spore coat associated protein JA (CotJA) XI92_09400 PF12652 CotJB protein XI92_09405 PF05067 Manganese containing catalase XI92_09410 PF05525 Branched-chain amino acid transport protein XI92_09425 PF09529 Integral membrane protein (intg_mem_TP0381) XI92_09435 PF00005 ABC transporter XI92_09440 PF12704 MacB-like periplasmic core domain XI92_09440 PF02687 FtsX-like permease family XI92_09445 PF06725 3D domain XI92_09445 PF01476 LysM domain XI92_09465 PF02378 Phosphotransferase system, EIIC XI92_09470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XI92_09475 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit XI92_09480 PF05043 Mga helix-turn-helix domain XI92_09480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XI92_09480 PF00874 PRD domain XI92_09480 PF08279 HTH domain XI92_09490 PF07690 Major Facilitator Superfamily XI92_09495 PF02690 Na+/Pi-cotransporter XI92_09500 PF08240 Alcohol dehydrogenase GroES-like domain XI92_09500 PF00107 Zinc-binding dehydrogenase XI92_09505 PF03816 Cell envelope-related transcriptional attenuator domain XI92_09515 PF01925 Sulfite exporter TauE/SafE XI92_09520 PF13686 DsrE/DsrF/DrsH-like family XI92_09535 PF01206 Sulfurtransferase TusA XI92_09540 PF00753 Metallo-beta-lactamase superfamily XI92_09540 PF00581 Rhodanese-like domain XI92_09545 PF01206 Sulfurtransferase TusA XI92_09545 PF00581 Rhodanese-like domain XI92_09550 PF02583 Metal-sensitive transcriptional repressor XI92_09555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XI92_09555 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_09565 PF00089 Trypsin XI92_09575 PF04293 SpoVR like protein XI92_09580 PF00881 Nitroreductase family XI92_09595 PF13276 HTH-like domain XI92_09595 PF13333 Integrase core domain XI92_09595 PF00665 Integrase core domain XI92_09600 PF03323 Bacillus/Clostridium GerA spore germination protein XI92_09610 PF03845 Spore germination protein XI92_09620 PF14148 YhdB-like protein XI92_09625 PF02600 Disulfide bond formation protein DsbB XI92_09630 PF00085 Thioredoxin XI92_09645 PF17969 L,D-transpeptidase C-terminal domain XI92_09645 PF03734 L,D-transpeptidase catalytic domain XI92_09655 PF00860 Permease family XI92_09665 PF00005 ABC transporter XI92_09690 PF01047 MarR family XI92_09695 PF07690 Major Facilitator Superfamily XI92_09700 PF02702 Osmosensitive K+ channel His kinase sensor domain XI92_09705 PF02669 K+-transporting ATPase, c chain XI92_09715 PF03814 Potassium-transporting ATPase A subunit XI92_09740 PF08543 Phosphomethylpyrimidine kinase XI92_09745 PF00899 ThiF family XI92_09750 PF05690 Thiazole biosynthesis protein ThiG XI92_09755 PF02597 ThiS family XI92_09760 PF01266 FAD dependent oxidoreductase XI92_09765 PF02581 Thiamine monophosphate synthase XI92_09770 PF09084 NMT1/THI5 like XI92_09775 PF00528 Binding-protein-dependent transport system inner membrane component XI92_09780 PF00005 ABC transporter XI92_09785 PF03070 TENA/THI-4/PQQC family XI92_09790 PF08239 Bacterial SH3 domain XI92_09790 PF00246 Zinc carboxypeptidase XI92_09810 PF00571 CBS domain XI92_09930 PF00873 AcrB/AcrD/AcrF family XI92_09935 PF00528 Binding-protein-dependent transport system inner membrane component XI92_09940 PF00528 Binding-protein-dependent transport system inner membrane component XI92_09945 PF12849 PBP superfamily domain XI92_09950 PF02421 Ferrous iron transport protein B XI92_09950 PF07670 Nucleoside recognition XI92_09950 PF17910 FeoB cytosolic helical domain XI92_09950 PF07664 Ferrous iron transport protein B C terminus XI92_09950 PF04023 FeoA domain XI92_09955 PF02421 Ferrous iron transport protein B XI92_09955 PF07664 Ferrous iron transport protein B C terminus XI92_09955 PF17910 FeoB cytosolic helical domain XI92_09955 PF07670 Nucleoside recognition XI92_09960 PF17910 FeoB cytosolic helical domain XI92_09960 PF07670 Nucleoside recognition XI92_09960 PF07664 Ferrous iron transport protein B C terminus XI92_09960 PF02421 Ferrous iron transport protein B XI92_09970 PF05504 Spore germination B3/ GerAC like, C-terminal XI92_09975 PF03845 Spore germination protein XI92_09980 PF03323 Bacillus/Clostridium GerA spore germination protein XI92_09985 PF00474 Sodium:solute symporter family XI92_09990 PF11755 Protein of unknown function (DUF3311) XI92_09995 PF01546 Peptidase family M20/M25/M40 XI92_09995 PF07687 Peptidase dimerisation domain XI92_10000 PF13529 Peptidase_C39 like family XI92_10005 PF00324 Amino acid permease XI92_10010 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XI92_10015 PF00115 Cytochrome C and Quinol oxidase polypeptide I XI92_10020 PF00510 Cytochrome c oxidase subunit III XI92_10030 PF02080 TrkA-C domain XI92_10030 PF00999 Sodium/hydrogen exchanger family XI92_10030 PF02254 TrkA-N domain XI92_10040 PF13673 Acetyltransferase (GNAT) domain XI92_10055 PF00860 Permease family XI92_10060 PF00324 Amino acid permease XI92_10075 PF05525 Branched-chain amino acid transport protein XI92_10080 PF00854 POT family XI92_10090 PF04203 Sortase domain XI92_10100 PF01381 Helix-turn-helix XI92_10105 PF03990 G5-linked-Ubiquitin-like domain XI92_10105 PF07501 G5 domain XI92_10105 PF06725 3D domain XI92_10110 PF02743 Cache domain XI92_10110 PF00672 HAMP domain XI92_10110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_10115 PF02673 Bacitracin resistance protein BacA XI92_10155 PF01580 FtsK/SpoIIIE family XI92_10155 PF17854 FtsK alpha domain XI92_10155 PF09397 Ftsk gamma domain XI92_10175 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_10175 PF12123 N-acetylmuramoyl-l-alanine amidase XI92_10245 PF00574 Clp protease XI92_10255 PF03354 Phage Terminase XI92_10305 PF00589 Phage integrase family XI92_10395 PF01381 Helix-turn-helix XI92_10405 PF00589 Phage integrase family XI92_10410 PF03372 Endonuclease/Exonuclease/phosphatase family XI92_10415 PF00882 Zinc dependent phospholipase C XI92_10425 PF13333 Integrase core domain XI92_10425 PF00665 Integrase core domain XI92_10435 PF08240 Alcohol dehydrogenase GroES-like domain XI92_10435 PF00107 Zinc-binding dehydrogenase XI92_10455 PF05547 Immune inhibitor A peptidase M6 XI92_10460 PF00923 Transaldolase/Fructose-6-phosphate aldolase XI92_10465 PF13407 Periplasmic binding protein domain XI92_10470 PF02653 Branched-chain amino acid transport system / permease component XI92_10475 PF00005 ABC transporter XI92_10480 PF05025 RbsD / FucU transport protein family XI92_10485 PF00294 pfkB family carbohydrate kinase XI92_10490 PF00356 Bacterial regulatory proteins, lacI family XI92_10495 PF07690 Major Facilitator Superfamily XI92_10500 PF01047 MarR family XI92_10505 PF07690 Major Facilitator Superfamily XI92_10515 PF00582 Universal stress protein family XI92_10530 PF00486 Transcriptional regulatory protein, C terminal XI92_10530 PF00072 Response regulator receiver domain XI92_10535 PF00989 PAS fold XI92_10535 PF00512 His Kinase A (phospho-acceptor) domain XI92_10535 PF18698 Histidine kinase sensor domain XI92_10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_10535 PF00672 HAMP domain XI92_10545 PF08279 HTH domain XI92_10545 PF13280 WYL domain XI92_10555 PF04542 Sigma-70 region 2 XI92_10555 PF08281 Sigma-70, region 4 XI92_10570 PF00324 Amino acid permease XI92_10575 PF00528 Binding-protein-dependent transport system inner membrane component XI92_10580 PF00528 Binding-protein-dependent transport system inner membrane component XI92_10585 PF00497 Bacterial extracellular solute-binding proteins, family 3 XI92_10590 PF00005 ABC transporter XI92_10600 PF01235 Sodium:alanine symporter family XI92_10605 PF01636 Phosphotransferase enzyme family XI92_10610 PF03323 Bacillus/Clostridium GerA spore germination protein XI92_10625 PF00128 Alpha amylase, catalytic domain XI92_10625 PF16657 Maltogenic Amylase, C-terminal domain XI92_10630 PF00367 phosphotransferase system, EIIB XI92_10630 PF02378 Phosphotransferase system, EIIC XI92_10635 PF00392 Bacterial regulatory proteins, gntR family XI92_10635 PF07702 UTRA domain XI92_10640 PF13520 Amino acid permease XI92_10645 PF03707 Bacterial signalling protein N terminal repeat XI92_10645 PF00990 Diguanylate cyclase, GGDEF domain XI92_10645 PF00563 EAL domain XI92_10655 PF13091 PLD-like domain XI92_10655 PF13396 Phospholipase_D-nuclease N-terminal XI92_10660 PF07728 AAA domain (dynein-related subfamily) XI92_10665 PF00092 von Willebrand factor type A domain XI92_10670 PF00293 NUDIX domain XI92_10670 PF13344 Haloacid dehalogenase-like hydrolase XI92_10675 PF01370 NAD dependent epimerase/dehydratase family XI92_10680 PF00155 Aminotransferase class I and II XI92_10685 PF08241 Methyltransferase domain XI92_10690 PF00005 ABC transporter XI92_10695 PF01032 FecCD transport family XI92_10700 PF01032 FecCD transport family XI92_10705 PF01497 Periplasmic binding protein XI92_10710 PF00854 POT family XI92_10715 PF08141 Small acid-soluble spore protein H family XI92_10720 PF01022 Bacterial regulatory protein, arsR family XI92_10725 PF00665 Integrase core domain XI92_10730 PF01695 IstB-like ATP binding protein XI92_10735 PF02652 L-lactate permease XI92_10740 PF10415 Fumarase C C-terminus XI92_10740 PF00206 Lyase XI92_10745 PF00571 CBS domain XI92_10745 PF03471 Transporter associated domain XI92_10745 PF01595 Cyclin M transmembrane N-terminal domain XI92_10750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_10755 PF01609 Transposase DDE domain XI92_10760 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_10775 PF07662 Na+ dependent nucleoside transporter C-terminus XI92_10775 PF01773 Na+ dependent nucleoside transporter N-terminus XI92_10780 PF03816 Cell envelope-related transcriptional attenuator domain XI92_10785 PF04294 VanW like protein XI92_10805 PF07504 Fungalysin/Thermolysin Propeptide Motif XI92_10805 PF02868 Thermolysin metallopeptidase, alpha-helical domain XI92_10805 PF01447 Thermolysin metallopeptidase, catalytic domain XI92_10805 PF03413 Peptidase propeptide and YPEB domain XI92_10820 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XI92_10820 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain XI92_10820 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XI92_10825 PF00403 Heavy-metal-associated domain XI92_10830 PF01022 Bacterial regulatory protein, arsR family XI92_10840 PF13520 Amino acid permease XI92_10845 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XI92_10845 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XI92_10855 PF07849 Protein of unknown function (DUF1641) XI92_10860 PF01568 Molydopterin dinucleotide binding domain XI92_10860 PF00037 4Fe-4S binding domain XI92_10860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XI92_10860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XI92_10860 PF00384 Molybdopterin oxidoreductase XI92_10865 PF02634 FdhD/NarQ family XI92_10870 PF00583 Acetyltransferase (GNAT) family XI92_10870 PF13508 Acetyltransferase (GNAT) domain XI92_10885 PF00072 Response regulator receiver domain XI92_10885 PF00486 Transcriptional regulatory protein, C terminal XI92_10890 PF00512 His Kinase A (phospho-acceptor) domain XI92_10890 PF00672 HAMP domain XI92_10890 PF18698 Histidine kinase sensor domain XI92_10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_10890 PF00989 PAS fold XI92_10900 PF00392 Bacterial regulatory proteins, gntR family XI92_10900 PF00155 Aminotransferase class I and II XI92_10905 PF00892 EamA-like transporter family XI92_10915 PF03949 Malic enzyme, NAD binding domain XI92_10915 PF00390 Malic enzyme, N-terminal domain XI92_10925 PF00072 Response regulator receiver domain XI92_10930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_10930 PF17203 Single cache domain 3 XI92_10930 PF00989 PAS fold XI92_10930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain XI92_10935 PF02743 Cache domain XI92_10935 PF00672 HAMP domain XI92_10935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_10940 PF13529 Peptidase_C39 like family XI92_10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_10950 PF00512 His Kinase A (phospho-acceptor) domain XI92_10955 PF00486 Transcriptional regulatory protein, C terminal XI92_10955 PF00072 Response regulator receiver domain XI92_10960 PF00149 Calcineurin-like phosphoesterase XI92_10965 PF13416 Bacterial extracellular solute-binding protein XI92_10970 PF00528 Binding-protein-dependent transport system inner membrane component XI92_10975 PF00528 Binding-protein-dependent transport system inner membrane component XI92_10980 PF17912 MalK OB fold domain XI92_10980 PF00005 ABC transporter XI92_10985 PF04309 Glycerol-3-phosphate responsive antiterminator XI92_11010 PF03600 Citrate transporter XI92_11015 PF12431 Transcriptional regulator XI92_11015 PF00072 Response regulator receiver domain XI92_11020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_11020 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain XI92_11020 PF17203 Single cache domain 3 XI92_11020 PF00989 PAS fold XI92_11025 PF02743 Cache domain XI92_11025 PF00672 HAMP domain XI92_11025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_11030 PF15975 Flotillin XI92_11030 PF01145 SPFH domain / Band 7 family XI92_11040 PF18496 Collagenase G catalytic helper subdomain XI92_11040 PF01752 Collagenase XI92_11040 PF08453 Peptidase family M9 N-terminal XI92_11045 PF02028 BCCT, betaine/carnitine/choline family transporter XI92_11055 PF04285 Protein of unknown function (DUF444) XI92_11065 PF08298 PrkA AAA domain XI92_11065 PF06798 PrkA serine protein kinase C-terminal domain XI92_11075 PF00563 EAL domain XI92_11075 PF00990 Diguanylate cyclase, GGDEF domain XI92_11075 PF00498 FHA domain XI92_11085 PF12671 Putative amidase domain XI92_11090 PF08331 Domain of unknown function (DUF1730) XI92_11100 PF13462 Thioredoxin XI92_11105 PF00912 Transglycosylase XI92_11105 PF00905 Penicillin binding protein transpeptidase domain XI92_11110 PF00293 NUDIX domain XI92_11110 PF13344 Haloacid dehalogenase-like hydrolase XI92_11115 PF01709 Transcriptional regulator XI92_11215 PF11023 Zinc-ribbon containing domain XI92_11225 PF01475 Ferric uptake regulator family XI92_11230 PF00578 AhpC/TSA family XI92_11235 PF07885 Ion channel XI92_11250 PF00005 ABC transporter XI92_11255 PF00202 Aminotransferase class-III XI92_11260 PF00310 Glutamine amidotransferases class-II XI92_11260 PF01645 Conserved region in glutamate synthase XI92_11260 PF01493 GXGXG motif XI92_11260 PF04898 Glutamate synthase central domain XI92_11265 PF06081 Aromatic acid exporter family member 1 XI92_11270 PF00664 ABC transporter transmembrane region XI92_11270 PF00005 ABC transporter XI92_11275 PF04167 Protein of unknown function (DUF402) XI92_11280 PF14182 YgaB-like protein XI92_11285 PF04259 Small, acid-soluble spore protein, gamma-type XI92_11295 PF14815 NUDIX domain XI92_11295 PF00730 HhH-GPD superfamily base excision DNA repair protein XI92_11300 PF04307 LexA-binding, inner membrane-associated putative hydrolase XI92_11305 PF14043 WVELL protein XI92_11310 PF08176 Small acid-soluble spore protein K family XI92_11325 PF02631 RecX family XI92_11330 PF08338 Domain of unknown function (DUF1731) XI92_11330 PF01370 NAD dependent epimerase/dehydratase family XI92_11335 PF01979 Amidohydrolase family XI92_11350 PF04101 Glycosyltransferase family 28 C-terminal domain XI92_11350 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase XI92_11355 PF04055 Radical SAM superfamily XI92_11360 PF01228 Glycine radical XI92_11360 PF02901 Pyruvate formate lyase-like XI92_11370 PF00535 Glycosyl transferase family 2 XI92_11375 PF01370 NAD dependent epimerase/dehydratase family XI92_11375 PF00551 Formyl transferase XI92_11375 PF02911 Formyl transferase, C-terminal domain XI92_11380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XI92_11380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XI92_11380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XI92_11385 PF00535 Glycosyl transferase family 2 XI92_11400 PF00144 Beta-lactamase XI92_11405 PF00367 phosphotransferase system, EIIB XI92_11405 PF02378 Phosphotransferase system, EIIC XI92_11410 PF04960 Glutaminase XI92_11440 PF07687 Peptidase dimerisation domain XI92_11440 PF01546 Peptidase family M20/M25/M40 XI92_11445 PF00324 Amino acid permease XI92_11455 PF00158 Sigma-54 interaction domain XI92_11455 PF13426 PAS domain XI92_11455 PF02954 Bacterial regulatory protein, Fis family XI92_11465 PF01416 tRNA pseudouridine synthase XI92_11470 PF01938 TRAM domain XI92_11470 PF05958 tRNA (Uracil-5-)-methyltransferase XI92_11475 PF00730 HhH-GPD superfamily base excision DNA repair protein XI92_11480 PF01522 Polysaccharide deacetylase XI92_11485 PF05681 Fumarate hydratase (Fumerase) XI92_11485 PF05683 Fumarase C-terminus XI92_11495 PF08756 YfkB-like domain XI92_11495 PF04055 Radical SAM superfamily XI92_11500 PF14167 YfkD-like protein XI92_11505 PF01699 Sodium/calcium exchanger protein XI92_11510 PF16242 Pyridoxamine 5'-phosphate oxidase like XI92_11525 PF09335 SNARE associated Golgi protein XI92_11535 PF10502 Signal peptidase, peptidase S26 XI92_11555 PF03631 Virulence factor BrkB XI92_11565 PF01451 Low molecular weight phosphotyrosine protein phosphatase XI92_11570 PF06569 Protein of unknown function (DUF1128) XI92_11575 PF00689 Cation transporting ATPase, C-terminus XI92_11575 PF00690 Cation transporter/ATPase, N-terminus XI92_11580 PF05816 Toxic anion resistance protein (TelA) XI92_11585 PF14266 Putative component of 'biosynthetic module' XI92_11590 PF03741 Integral membrane protein TerC family XI92_11595 PF02342 TerD domain XI92_11600 PF02342 TerD domain XI92_11605 PF02342 TerD domain XI92_11610 PF00480 ROK family XI92_11620 PF09180 Prolyl-tRNA synthetase, C-terminal XI92_11620 PF03129 Anticodon binding domain XI92_11620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XI92_11635 PF11700 Vacuole effluxer Atg22 like XI92_11650 PF00440 Bacterial regulatory proteins, tetR family XI92_11650 PF08360 QacR-like protein, C-terminal region XI92_11675 PF00041 Fibronectin type III domain XI92_11675 PF00704 Glycosyl hydrolases family 18 XI92_11680 PF00005 ABC transporter XI92_11690 PF00528 Binding-protein-dependent transport system inner membrane component XI92_11695 PF01910 Thiamine-binding protein XI92_11700 PF00975 Thioesterase domain XI92_11700 PF00550 Phosphopantetheine attachment site XI92_11700 PF13193 AMP-binding enzyme C-terminal domain XI92_11700 PF00501 AMP-binding enzyme XI92_11700 PF00668 Condensation domain XI92_11705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_11705 PF00672 HAMP domain XI92_11710 PF03605 Anaerobic c4-dicarboxylate membrane transporter XI92_11715 PF02581 Thiamine monophosphate synthase XI92_11720 PF02110 Hydroxyethylthiazole kinase family XI92_11725 PF01751 Toprim domain XI92_11725 PF01131 DNA topoisomerase XI92_11730 PF01061 ABC-2 type transporter XI92_11735 PF03372 Endonuclease/Exonuclease/phosphatase family XI92_11740 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XI92_11740 PF02378 Phosphotransferase system, EIIC XI92_11740 PF00367 phosphotransferase system, EIIB XI92_11745 PF16657 Maltogenic Amylase, C-terminal domain XI92_11745 PF00128 Alpha amylase, catalytic domain XI92_11755 PF01695 IstB-like ATP binding protein XI92_11760 PF00665 Integrase core domain XI92_11770 PF13545 Crp-like helix-turn-helix domain XI92_11770 PF00027 Cyclic nucleotide-binding domain XI92_11775 PF00696 Amino acid kinase family XI92_11780 PF13520 Amino acid permease XI92_11785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XI92_11785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XI92_11795 PF01316 Arginine repressor, DNA binding domain XI92_11795 PF02863 Arginine repressor, C-terminal domain XI92_11800 PF12729 Four helix bundle sensory module for signal transduction XI92_11800 PF00672 HAMP domain XI92_11800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_11805 PF00005 ABC transporter XI92_11810 PF00497 Bacterial extracellular solute-binding proteins, family 3 XI92_11815 PF00528 Binding-protein-dependent transport system inner membrane component XI92_11830 PF01609 Transposase DDE domain XI92_11840 PF07690 Major Facilitator Superfamily XI92_11865 PF13426 PAS domain XI92_11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_11865 PF00512 His Kinase A (phospho-acceptor) domain XI92_11865 PF00989 PAS fold XI92_11865 PF13188 PAS domain XI92_11890 PF12728 Helix-turn-helix domain XI92_11915 PF01497 Periplasmic binding protein XI92_11920 PF01032 FecCD transport family XI92_11925 PF01032 FecCD transport family XI92_11930 PF00596 Class II Aldolase and Adducin N-terminal domain XI92_11940 PF01636 Phosphotransferase enzyme family XI92_11945 PF00578 AhpC/TSA family XI92_11950 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_11950 PF13192 Thioredoxin domain XI92_11960 PF07687 Peptidase dimerisation domain XI92_11960 PF01546 Peptidase family M20/M25/M40 XI92_11975 PF13378 Enolase C-terminal domain-like XI92_11975 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XI92_11990 PF07308 Protein of unknown function (DUF1456) XI92_11995 PF01207 Dihydrouridine synthase (Dus) XI92_12000 PF02899 Phage integrase, N-terminal SAM-like domain XI92_12000 PF00589 Phage integrase family XI92_12005 PF00589 Phage integrase family XI92_12020 PF01925 Sulfite exporter TauE/SafE XI92_12035 PF12123 N-acetylmuramoyl-l-alanine amidase XI92_12035 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_12105 PF00574 Clp protease XI92_12110 PF01548 Transposase XI92_12110 PF02371 Transposase IS116/IS110/IS902 family XI92_12120 PF03354 Phage Terminase XI92_12160 PF00589 Phage integrase family XI92_12255 PF18277 AbrB C-terminal domain XI92_12255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XI92_12265 PF01695 IstB-like ATP binding protein XI92_12310 PF14659 Phage integrase, N-terminal SAM-like domain XI92_12310 PF00589 Phage integrase family XI92_12315 PF05958 tRNA (Uracil-5-)-methyltransferase XI92_12315 PF01938 TRAM domain XI92_12315 PF13847 Methyltransferase domain XI92_12320 PF07670 Nucleoside recognition XI92_12320 PF01773 Na+ dependent nucleoside transporter N-terminus XI92_12320 PF07662 Na+ dependent nucleoside transporter C-terminus XI92_12335 PF02073 Thermophilic metalloprotease (M29) XI92_12345 PF00893 Small Multidrug Resistance protein XI92_12350 PF00171 Aldehyde dehydrogenase family XI92_12355 PF00158 Sigma-54 interaction domain XI92_12360 PF00202 Aminotransferase class-III XI92_12365 PF13419 Haloacid dehalogenase-like hydrolase XI92_12370 PF00781 Diacylglycerol kinase catalytic domain XI92_12375 PF02934 GatB/GatE catalytic domain XI92_12375 PF02637 GatB domain XI92_12380 PF01425 Amidase XI92_12385 PF02686 Glu-tRNAGln amidotransferase C subunit XI92_12390 PF05360 yiaA/B two helix domain XI92_12395 PF01047 MarR family XI92_12400 PF02374 Anion-transporting ATPase XI92_12400 PF17886 HSP20-like domain found in ArsA XI92_12415 PF03180 NLPA lipoprotein XI92_12420 PF00528 Binding-protein-dependent transport system inner membrane component XI92_12425 PF00005 ABC transporter XI92_12425 PF09383 NIL domain XI92_12430 PF00857 Isochorismatase family XI92_12435 PF00171 Aldehyde dehydrogenase family XI92_12440 PF01925 Sulfite exporter TauE/SafE XI92_12445 PF07537 CamS sex pheromone cAM373 precursor XI92_12455 PF00580 UvrD/REP helicase N-terminal domain XI92_12455 PF13361 UvrD-like helicase C-terminal domain XI92_12460 PF01884 PcrB family XI92_12485 PF02844 Phosphoribosylglycinamide synthetase, N domain XI92_12485 PF02843 Phosphoribosylglycinamide synthetase, C domain XI92_12485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XI92_12490 PF01808 AICARFT/IMPCHase bienzyme XI92_12490 PF02142 MGS-like domain XI92_12495 PF00551 Formyl transferase XI92_12500 PF00586 AIR synthase related protein, N-terminal domain XI92_12500 PF02769 AIR synthase related protein, C-terminal domain XI92_12505 PF00156 Phosphoribosyl transferase domain XI92_12510 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XI92_12510 PF02769 AIR synthase related protein, C-terminal domain XI92_12510 PF00586 AIR synthase related protein, N-terminal domain XI92_12520 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase XI92_12525 PF01259 SAICAR synthetase XI92_12530 PF10397 Adenylosuccinate lyase C-terminus XI92_12530 PF00206 Lyase XI92_12535 PF02222 ATP-grasp domain XI92_12535 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XI92_12540 PF00731 AIR carboxylase XI92_12565 PF00535 Glycosyl transferase family 2 XI92_12575 PF01370 NAD dependent epimerase/dehydratase family XI92_12580 PF01695 IstB-like ATP binding protein XI92_12585 PF00665 Integrase core domain XI92_12605 PF14307 Glycosyltransferase WbsX XI92_12605 PF05045 Rhamnan synthesis protein F XI92_12625 PF00072 Response regulator receiver domain XI92_12625 PF00486 Transcriptional regulatory protein, C terminal XI92_12630 PF00512 His Kinase A (phospho-acceptor) domain XI92_12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_12635 PF00005 ABC transporter XI92_12645 PF02673 Bacitracin resistance protein BacA XI92_12670 PF01323 DSBA-like thioredoxin domain XI92_12695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_12695 PF00512 His Kinase A (phospho-acceptor) domain XI92_12695 PF00989 PAS fold XI92_12695 PF16736 Single Cache-like XI92_12700 PF00486 Transcriptional regulatory protein, C terminal XI92_12700 PF00072 Response regulator receiver domain XI92_12705 PF00860 Permease family XI92_12715 PF00154 recA bacterial DNA recombination protein XI92_12735 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_12735 PF12123 N-acetylmuramoyl-l-alanine amidase XI92_12740 PF05105 Bacteriophage holin family XI92_12840 PF00589 Phage integrase family XI92_12975 PF00589 Phage integrase family XI92_12975 PF14659 Phage integrase, N-terminal SAM-like domain XI92_12980 PF00958 GMP synthase C terminal domain XI92_12980 PF00117 Glutamine amidotransferase class-I XI92_12980 PF02540 NAD synthase XI92_13055 PF14659 Phage integrase, N-terminal SAM-like domain XI92_13055 PF00589 Phage integrase family XI92_13060 PF00118 TCP-1/cpn60 chaperonin family XI92_13065 PF00166 Chaperonin 10 Kd subunit XI92_13070 PF02517 CPBP intramembrane metalloprotease XI92_13080 PF02629 CoA binding domain XI92_13080 PF06971 Putative DNA-binding protein N-terminus XI92_13085 PF12848 ABC transporter XI92_13085 PF16326 ABC transporter C-terminal domain XI92_13085 PF00005 ABC transporter XI92_13090 PF00814 Glycoprotease family XI92_13095 PF00583 Acetyltransferase (GNAT) family XI92_13100 PF00814 Glycoprotease family XI92_13105 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE XI92_13195 PF10263 SprT-like family XI92_13195 PF17283 SprT-like zinc ribbon domain XI92_13205 PF17674 HHH domain XI92_13205 PF09371 Tex-like protein N-terminal domain XI92_13205 PF16921 Tex protein YqgF-like domain XI92_13205 PF00575 S1 RNA binding domain XI92_13210 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system XI92_13215 PF01402 Ribbon-helix-helix protein, copG family XI92_13220 PF01168 Alanine racemase, N-terminal domain XI92_13220 PF00842 Alanine racemase, C-terminal domain XI92_13230 PF01648 4'-phosphopantetheinyl transferase superfamily XI92_13235 PF01694 Rhomboid family XI92_13240 PF03851 UV-endonuclease UvdE XI92_13245 PF00271 Helicase conserved C-terminal domain XI92_13245 PF00270 DEAD/DEAH box helicase XI92_13250 PF02875 Mur ligase family, glutamate ligase domain XI92_13250 PF08245 Mur ligase middle domain XI92_13250 PF01225 Mur ligase family, catalytic domain XI92_13255 PF01820 D-ala D-ala ligase N-terminus XI92_13255 PF07478 D-ala D-ala ligase C-terminus XI92_13260 PF07690 Major Facilitator Superfamily XI92_13275 PF01557 Fumarylacetoacetate (FAA) hydrolase family XI92_13280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_13320 PF13333 Integrase core domain XI92_13320 PF00665 Integrase core domain XI92_13320 PF13276 HTH-like domain XI92_13325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XI92_13325 PF00005 ABC transporter XI92_13330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XI92_13330 PF00005 ABC transporter XI92_13345 PF01609 Transposase DDE domain XI92_13350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_13370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_13380 PF16326 ABC transporter C-terminal domain XI92_13380 PF00005 ABC transporter XI92_13380 PF12848 ABC transporter XI92_13405 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) XI92_13425 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_13425 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_13435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XI92_13435 PF00356 Bacterial regulatory proteins, lacI family XI92_13445 PF01553 Acyltransferase XI92_13455 PF14142 YrzO-like protein XI92_13460 PF00892 EamA-like transporter family XI92_13465 PF03466 LysR substrate binding domain XI92_13465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_13480 PF12727 PBP superfamily domain XI92_13480 PF12728 Helix-turn-helix domain XI92_13490 PF00528 Binding-protein-dependent transport system inner membrane component XI92_13495 PF06800 Sugar transport protein XI92_13500 PF14748 Pyrroline-5-carboxylate reductase dimerisation XI92_13500 PF03807 NADP oxidoreductase coenzyme F420-dependent XI92_13505 PF00248 Aldo/keto reductase family XI92_13515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_13520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_13535 PF12833 Helix-turn-helix domain XI92_13550 PF07690 Major Facilitator Superfamily XI92_13560 PF07690 Major Facilitator Superfamily XI92_13565 PF01565 FAD binding domain XI92_13575 PF08240 Alcohol dehydrogenase GroES-like domain XI92_13575 PF00107 Zinc-binding dehydrogenase XI92_13580 PF03180 NLPA lipoprotein XI92_13585 PF00005 ABC transporter XI92_13585 PF09383 NIL domain XI92_13590 PF00528 Binding-protein-dependent transport system inner membrane component XI92_13610 PF00326 Prolyl oligopeptidase family XI92_13610 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XI92_13615 PF01380 SIS domain XI92_13625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XI92_13625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XI92_13625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XI92_13625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XI92_13630 PF07949 YbbR-like protein XI92_13640 PF00491 Arginase family XI92_13645 PF02595 Glycerate kinase family XI92_13715 PF01522 Polysaccharide deacetylase XI92_13720 PF14089 KinB-signalling pathway activation in sporulation XI92_13725 PF17898 Spore germination GerD central core domain XI92_13730 PF10609 NUBPL iron-transfer P-loop NTPase XI92_13735 PF01520 N-acetylmuramoyl-L-alanine amidase XI92_13745 PF00380 Ribosomal protein S9/S16 XI92_13750 PF00572 Ribosomal protein L13 XI92_13755 PF01416 tRNA pseudouridine synthase XI92_13760 PF02361 Cobalt transport protein XI92_13765 PF00005 ABC transporter XI92_13770 PF00005 ABC transporter XI92_13775 PF01196 Ribosomal protein L17 XI92_13780 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XI92_13780 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XI92_13780 PF01000 RNA polymerase Rpb3/RpoA insert domain XI92_13785 PF00411 Ribosomal protein S11 XI92_13790 PF00416 Ribosomal protein S13/S18 XI92_13795 PF00444 Ribosomal protein L36 XI92_13800 PF01176 Translation initiation factor 1A / IF-1 XI92_13805 PF00557 Metallopeptidase family M24 XI92_13810 PF05191 Adenylate kinase, active site lid XI92_13815 PF00344 SecY translocase XI92_13820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XI92_13825 PF00327 Ribosomal protein L30p/L7e XI92_13830 PF00333 Ribosomal protein S5, N-terminal domain XI92_13830 PF03719 Ribosomal protein S5, C-terminal domain XI92_13835 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XI92_13840 PF00347 Ribosomal protein L6 XI92_13845 PF00410 Ribosomal protein S8 XI92_13850 PF00253 Ribosomal protein S14p/S29e XI92_13855 PF00281 Ribosomal protein L5 XI92_13855 PF00673 ribosomal L5P family C-terminus XI92_13860 PF00467 KOW motif XI92_13860 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XI92_13865 PF00238 Ribosomal protein L14p/L23e XI92_13870 PF00366 Ribosomal protein S17 XI92_13875 PF00831 Ribosomal L29 protein XI92_13880 PF00252 Ribosomal protein L16p/L10e XI92_13885 PF00189 Ribosomal protein S3, C-terminal domain XI92_13885 PF07650 KH domain XI92_13890 PF00237 Ribosomal protein L22p/L17e XI92_13895 PF00203 Ribosomal protein S19 XI92_13900 PF00181 Ribosomal Proteins L2, RNA binding domain XI92_13900 PF03947 Ribosomal Proteins L2, C-terminal domain XI92_13905 PF00276 Ribosomal protein L23 XI92_13910 PF00573 Ribosomal protein L4/L1 family XI92_13915 PF00297 Ribosomal protein L3 XI92_13920 PF00338 Ribosomal protein S10p/S20e XI92_13925 PF00009 Elongation factor Tu GTP binding domain XI92_13925 PF03143 Elongation factor Tu C-terminal domain XI92_13925 PF03144 Elongation factor Tu domain 2 XI92_13930 PF00679 Elongation factor G C-terminus XI92_13930 PF14492 Elongation Factor G, domain II XI92_13930 PF03764 Elongation factor G, domain IV XI92_13930 PF00009 Elongation factor Tu GTP binding domain XI92_13930 PF03144 Elongation factor Tu domain 2 XI92_13935 PF00177 Ribosomal protein S7p/S5e XI92_13940 PF00164 Ribosomal protein S12/S23 XI92_13945 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family XI92_13950 PF04998 RNA polymerase Rpb1, domain 5 XI92_13950 PF04997 RNA polymerase Rpb1, domain 1 XI92_13950 PF05000 RNA polymerase Rpb1, domain 4 XI92_13950 PF04983 RNA polymerase Rpb1, domain 3 XI92_13950 PF00623 RNA polymerase Rpb1, domain 2 XI92_13955 PF04563 RNA polymerase beta subunit XI92_13955 PF04561 RNA polymerase Rpb2, domain 2 XI92_13955 PF04565 RNA polymerase Rpb2, domain 3 XI92_13955 PF10385 RNA polymerase beta subunit external 1 domain XI92_13955 PF04560 RNA polymerase Rpb2, domain 7 XI92_13955 PF00562 RNA polymerase Rpb2, domain 6 XI92_13960 PF05175 Methyltransferase small domain XI92_13965 PF16320 Ribosomal protein L7/L12 dimerisation domain XI92_13965 PF00542 Ribosomal protein L7/L12 C-terminal domain XI92_13970 PF00466 Ribosomal protein L10 XI92_13975 PF00687 Ribosomal protein L1p/L10e family XI92_13980 PF00298 Ribosomal protein L11, RNA binding domain XI92_13980 PF03946 Ribosomal protein L11, N-terminal domain XI92_13985 PF00467 KOW motif XI92_13985 PF02357 Transcription termination factor nusG XI92_13990 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XI92_13995 PF00471 Ribosomal protein L33 XI92_14000 PF08281 Sigma-70, region 4 XI92_14000 PF04542 Sigma-70 region 2 XI92_14005 PF05991 YacP-like NYN domain XI92_14010 PF00588 SpoU rRNA Methylase family XI92_14010 PF08032 RNA 2'-O ribose methyltransferase substrate binding XI92_14015 PF00636 Ribonuclease III domain XI92_14025 PF06426 Serine acetyltransferase, N-terminal XI92_14025 PF00132 Bacterial transferase hexapeptide (six repeats) XI92_14030 PF00749 tRNA synthetases class I (E and Q), catalytic domain XI92_14035 PF02542 YgbB family XI92_14040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XI92_14050 PF02457 DisA bacterial checkpoint controller nucleotide-binding XI92_14050 PF10635 DisA bacterial checkpoint controller linker region XI92_14055 PF18073 Rubredoxin metal binding domain XI92_14060 PF00004 ATPase family associated with various cellular activities (AAA) XI92_14060 PF07724 AAA domain (Cdc48 subfamily) XI92_14060 PF17871 AAA lid domain XI92_14060 PF02861 Clp amino terminal domain, pathogenicity island component XI92_14060 PF10431 C-terminal, D2-small domain, of ClpB protein XI92_14065 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain XI92_14070 PF02151 UvrB/uvrC motif XI92_14075 PF17727 CtsR C-terminal dimerization domain XI92_14075 PF05848 CtsR N-terminal HTH domain XI92_14155 PF00152 tRNA synthetases class II (D, K and N) XI92_14155 PF01336 OB-fold nucleic acid binding domain XI92_14160 PF01207 Dihydrouridine synthase (Dus) XI92_14165 PF01381 Helix-turn-helix XI92_14170 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XI92_14175 PF02152 Dihydroneopterin aldolase XI92_14180 PF00809 Pterin binding enzyme XI92_14185 PF01063 Amino-transferase class IV XI92_14190 PF00117 Glutamine amidotransferase class-I XI92_14195 PF04715 Anthranilate synthase component I, N terminal region XI92_14195 PF00425 chorismate binding enzyme XI92_14200 PF00291 Pyridoxal-phosphate dependent enzyme XI92_14205 PF01430 Hsp33 protein XI92_14210 PF03309 Type III pantothenate kinase XI92_14215 PF06480 FtsH Extracellular XI92_14215 PF01434 Peptidase family M41 XI92_14215 PF17862 AAA+ lid domain XI92_14215 PF00004 ATPase family associated with various cellular activities (AAA) XI92_14225 PF09179 TilS substrate binding domain XI92_14225 PF01171 PP-loop family XI92_14225 PF11734 TilS substrate C-terminal domain XI92_14230 PF07228 Stage II sporulation protein E (SpoIIE) XI92_14245 PF00575 S1 RNA binding domain XI92_14255 PF09578 Spore cortex protein YabQ (Spore_YabQ) XI92_14260 PF07873 YabP family XI92_14265 PF01479 S4 domain XI92_14270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XI92_14270 PF03819 MazG nucleotide pyrophosphohydrolase domain XI92_14275 PF01943 Polysaccharide biosynthesis protein XI92_14275 PF14667 Polysaccharide biosynthesis C-terminal domain XI92_14280 PF15714 Stage V sporulation protein T C-terminal, transcription factor XI92_14280 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XI92_14285 PF02559 CarD-like/TRCF domain XI92_14285 PF17757 UvrB interaction domain XI92_14285 PF00270 DEAD/DEAH box helicase XI92_14285 PF03461 TRCF domain XI92_14285 PF00271 Helicase conserved C-terminal domain XI92_14295 PF01195 Peptidyl-tRNA hydrolase XI92_14300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XI92_14300 PF14572 Phosphoribosyl synthetase-associated domain XI92_14310 PF04026 SpoVG XI92_14315 PF01042 Endoribonuclease L-PSP XI92_14320 PF09182 Bacterial purine repressor, N-terminal XI92_14320 PF00156 Phosphoribosyl transferase domain XI92_14325 PF00288 GHMP kinases N terminal domain XI92_14325 PF08544 GHMP kinases C terminal XI92_14330 PF00269 Small, acid-soluble spore proteins, alpha/beta type XI92_14335 PF06257 Biofilm formation stimulator VEG XI92_14340 PF05582 YabG peptidase U57 XI92_14345 PF00398 Ribosomal RNA adenine dimethylase XI92_14350 PF13662 Toprim domain XI92_14350 PF13331 Domain of unknown function (DUF4093) XI92_14355 PF01026 TatD related DNase XI92_14360 PF08264 Anticodon-binding domain of tRNA XI92_14360 PF01588 Putative tRNA binding domain XI92_14360 PF09334 tRNA synthetases class I (M) XI92_14365 PF18277 AbrB C-terminal domain XI92_14365 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XI92_14370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XI92_14375 PF01541 GIY-YIG catalytic domain XI92_14380 PF05175 Methyltransferase small domain XI92_14385 PF06156 Initiation control protein YabA XI92_14390 PF04468 PSP1 C-terminal conserved region XI92_14395 PF09115 DNA polymerase III, delta subunit, C terminal XI92_14400 PF02223 Thymidylate kinase XI92_14405 PF01276 Orn/Lys/Arg decarboxylase, major domain XI92_14405 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain XI92_14440 PF07441 SigmaK-factor processing regulatory protein BofA XI92_14445 PF10704 Protein of unknown function (DUF2508) XI92_14450 PF13662 Toprim domain XI92_14450 PF02132 RecR protein XI92_14455 PF02575 YbaB/EbfC DNA-binding family XI92_14460 PF12169 DNA polymerase III subunits gamma and tau domain III XI92_14465 PF14437 MafB19-like deaminase XI92_14475 PF00857 Isochorismatase family XI92_14480 PF01712 Deoxynucleoside kinase XI92_14485 PF01712 Deoxynucleoside kinase XI92_14500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XI92_14500 PF02403 Seryl-tRNA synthetase N-terminal domain XI92_14505 PF01174 SNO glutamine amidotransferase family XI92_14510 PF01680 SOR/SNZ family XI92_14515 PF07943 Penicillin-binding protein 5, C-terminal domain XI92_14515 PF00768 D-alanyl-D-alanine carboxypeptidase XI92_14520 PF00571 CBS domain XI92_14520 PF00478 IMP dehydrogenase / GMP reductase domain XI92_14525 PF14175 YaaC-like Protein XI92_14555 PF00521 DNA gyrase/topoisomerase IV, subunit A XI92_14555 PF03989 DNA gyrase C-terminal domain, beta-propeller XI92_14560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_14560 PF00204 DNA gyrase B XI92_14560 PF01751 Toprim domain XI92_14560 PF00986 DNA gyrase B subunit, carboxyl terminus XI92_14565 PF02463 RecF/RecN/SMC N terminal domain XI92_14575 PF02767 DNA polymerase III beta subunit, central domain XI92_14575 PF00712 DNA polymerase III beta subunit, N-terminal domain XI92_14575 PF02768 DNA polymerase III beta subunit, C-terminal domain XI92_14580 PF08299 Bacterial dnaA protein helix-turn-helix XI92_14580 PF11638 DnaA N-terminal domain XI92_14580 PF00308 Bacterial dnaA protein XI92_14585 PF00468 Ribosomal protein L34 XI92_14590 PF00825 Ribonuclease P XI92_14595 PF02096 60Kd inner membrane protein XI92_14600 PF01424 R3H domain XI92_14600 PF14804 Jag N-terminus XI92_14605 PF12631 MnmE helical domain XI92_14605 PF01926 50S ribosome-binding GTPase XI92_14605 PF10396 GTP-binding protein TrmE N-terminus XI92_14610 PF13932 GidA associated domain XI92_14610 PF01134 Glucose inhibited division protein A XI92_14615 PF02527 rRNA small subunit methyltransferase G XI92_14620 PF17762 HTH domain found in ParB protein XI92_14620 PF02195 ParB-like nuclease domain XI92_14625 PF13614 AAA domain XI92_14630 PF17762 HTH domain found in ParB protein XI92_14630 PF02195 ParB-like nuclease domain XI92_14635 PF06866 Protein of unknown function (DUF1256) XI92_14640 PF00924 Mechanosensitive ion channel XI92_14645 PF06107 Bacterial protein of unknown function (DUF951) XI92_14650 PF06071 Protein of unknown function (DUF933) XI92_14650 PF01926 50S ribosome-binding GTPase XI92_14655 PF01250 Ribosomal protein S6 XI92_14660 PF00436 Single-strand binding protein family XI92_14665 PF01084 Ribosomal protein S18 XI92_14670 PF09991 Predicted membrane protein (DUF2232) XI92_14675 PF01368 DHH family XI92_14675 PF02272 DHHA1 domain XI92_14680 PF01281 Ribosomal protein L9, N-terminal domain XI92_14680 PF03948 Ribosomal protein L9, C-terminal domain XI92_14685 PF03796 DnaB-like helicase C terminal domain XI92_14685 PF00772 DnaB-like helicase N terminal domain XI92_14690 PF00709 Adenylosuccinate synthetase XI92_14715 PF00072 Response regulator receiver domain XI92_14715 PF00486 Transcriptional regulatory protein, C terminal XI92_14720 PF00672 HAMP domain XI92_14720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_14720 PF00512 His Kinase A (phospho-acceptor) domain XI92_14720 PF13426 PAS domain XI92_14730 PF09648 YycH protein XI92_14735 PF00753 Metallo-beta-lactamase superfamily XI92_14740 PF13180 PDZ domain XI92_14750 PF02590 Predicted SPOUT methyltransferase XI92_14755 PF00989 PAS fold XI92_14755 PF00512 His Kinase A (phospho-acceptor) domain XI92_14755 PF13426 PAS domain XI92_14755 PF13188 PAS domain XI92_14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_14775 PF00478 IMP dehydrogenase / GMP reductase domain XI92_14780 PF03880 DbpA RNA binding domain XI92_14780 PF00270 DEAD/DEAH box helicase XI92_14780 PF00271 Helicase conserved C-terminal domain XI92_14795 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_14800 PF01609 Transposase DDE domain XI92_14815 PF03006 Haemolysin-III related XI92_14820 PF16363 GDP-mannose 4,6 dehydratase XI92_14825 PF02293 AmiS/UreI family transporter XI92_14835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XI92_14835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XI92_14840 PF02898 Nitric oxide synthase, oxygenase domain XI92_14845 PF02028 BCCT, betaine/carnitine/choline family transporter XI92_14850 PF07690 Major Facilitator Superfamily XI92_14855 PF06580 Histidine kinase XI92_14855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_14855 PF13492 GAF domain XI92_14855 PF07694 5TMR of 5TMR-LYT XI92_14860 PF04397 LytTr DNA-binding domain XI92_14860 PF00072 Response regulator receiver domain XI92_14865 PF03788 LrgA family XI92_14870 PF04172 LrgB-like family XI92_14875 PF01594 AI-2E family transporter XI92_14880 PF01625 Peptide methionine sulfoxide reductase XI92_14880 PF01641 SelR domain XI92_14885 PF00873 AcrB/AcrD/AcrF family XI92_14890 PF00440 Bacterial regulatory proteins, tetR family XI92_14895 PF00005 ABC transporter XI92_14895 PF12848 ABC transporter XI92_14900 PF00535 Glycosyl transferase family 2 XI92_14905 PF09586 Bacterial membrane protein YfhO XI92_14915 PF00535 Glycosyl transferase family 2 XI92_14930 PF00535 Glycosyl transferase family 2 XI92_14935 PF03061 Thioesterase superfamily XI92_14945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_14950 PF03458 UPF0126 domain XI92_14960 PF13439 Glycosyltransferase Family 4 XI92_14960 PF00534 Glycosyl transferases group 1 XI92_14965 PF03808 Glycosyl transferase WecB/TagA/CpsF family XI92_14970 PF07690 Major Facilitator Superfamily XI92_14975 PF00072 Response regulator receiver domain XI92_14975 PF04397 LytTr DNA-binding domain XI92_14980 PF13722 5TM C-terminal transporter carbon starvation CstA XI92_14980 PF02554 Carbon starvation protein CstA XI92_14985 PF04328 Selenoprotein, putative XI92_14990 PF07694 5TMR of 5TMR-LYT XI92_14990 PF00990 Diguanylate cyclase, GGDEF domain XI92_14995 PF08543 Phosphomethylpyrimidine kinase XI92_15000 PF13185 GAF domain XI92_15000 PF07730 Histidine kinase XI92_15005 PF00072 Response regulator receiver domain XI92_15005 PF00196 Bacterial regulatory proteins, luxR family XI92_15010 PF02525 Flavodoxin-like fold XI92_15015 PF00027 Cyclic nucleotide-binding domain XI92_15020 PF13419 Haloacid dehalogenase-like hydrolase XI92_15030 PF01053 Cys/Met metabolism PLP-dependent enzyme XI92_15035 PF04204 Homoserine O-succinyltransferase XI92_15040 PF00742 Homoserine dehydrogenase XI92_15040 PF01842 ACT domain XI92_15040 PF03447 Homoserine dehydrogenase, NAD binding domain XI92_15050 PF00356 Bacterial regulatory proteins, lacI family XI92_15050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XI92_15055 PF13472 GDSL-like Lipase/Acylhydrolase family XI92_15060 PF00005 ABC transporter XI92_15065 PF12679 ABC-2 family transporter protein XI92_15070 PF03167 Uracil DNA glycosylase superfamily XI92_15075 PF12823 Domain of unknown function (DUF3817) XI92_15085 PF00860 Permease family XI92_15090 PF07885 Ion channel XI92_15090 PF02254 TrkA-N domain XI92_15100 PF04241 Protein of unknown function (DUF423) XI92_15105 PF09671 Spore coat protein (Spore_GerQ) XI92_15110 PF07486 Cell Wall Hydrolase XI92_15115 PF07943 Penicillin-binding protein 5, C-terminal domain XI92_15115 PF00768 D-alanyl-D-alanine carboxypeptidase XI92_15125 PF01515 Phosphate acetyl/butaryl transferase XI92_15130 PF03099 Biotin/lipoate A/B protein ligase family XI92_15140 PF07293 Protein of unknown function (DUF1450) XI92_15145 PF01032 FecCD transport family XI92_15150 PF01032 FecCD transport family XI92_15155 PF00005 ABC transporter XI92_15160 PF01497 Periplasmic binding protein XI92_15165 PF01966 HD domain XI92_15170 PF01361 Tautomerase enzyme XI92_15175 PF02163 Peptidase family M50 XI92_15180 PF08741 YwhD family XI92_15185 PF00905 Penicillin binding protein transpeptidase domain XI92_15185 PF00912 Transglycosylase XI92_15190 PF03009 Glycerophosphoryl diester phosphodiesterase family XI92_15195 PF13411 MerR HTH family regulatory protein XI92_15200 PF07690 Major Facilitator Superfamily XI92_15205 PF17284 Spermidine synthase tetramerisation domain XI92_15210 PF00491 Arginase family XI92_15230 PF17676 LD-carboxypeptidase C-terminal domain XI92_15230 PF02016 LD-carboxypeptidase N-terminal domain XI92_15235 PF09148 Domain of unknown function (DUF1934) XI92_15240 PF03485 Arginyl tRNA synthetase N terminal domain XI92_15240 PF05746 DALR anticodon binding domain XI92_15240 PF00750 tRNA synthetases class I (R) XI92_15245 PF08281 Sigma-70, region 4 XI92_15245 PF04542 Sigma-70 region 2 XI92_15270 PF00665 Integrase core domain XI92_15270 PF13333 Integrase core domain XI92_15270 PF13276 HTH-like domain XI92_15275 PF04389 Peptidase family M28 XI92_15275 PF02225 PA domain XI92_15285 PF00557 Metallopeptidase family M24 XI92_15290 PF00005 ABC transporter XI92_15300 PF07730 Histidine kinase XI92_15300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_15305 PF00196 Bacterial regulatory proteins, luxR family XI92_15305 PF00072 Response regulator receiver domain XI92_15310 PF02868 Thermolysin metallopeptidase, alpha-helical domain XI92_15310 PF03413 Peptidase propeptide and YPEB domain XI92_15310 PF07504 Fungalysin/Thermolysin Propeptide Motif XI92_15310 PF01447 Thermolysin metallopeptidase, catalytic domain XI92_15325 PF00563 EAL domain XI92_15325 PF00990 Diguanylate cyclase, GGDEF domain XI92_15325 PF03707 Bacterial signalling protein N terminal repeat XI92_15345 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_15350 PF01609 Transposase DDE domain XI92_15355 PF03851 UV-endonuclease UvdE XI92_15360 PF13091 PLD-like domain XI92_15365 PF13183 4Fe-4S dicluster domain XI92_15365 PF02754 Cysteine-rich domain XI92_15370 PF00108 Thiolase, N-terminal domain XI92_15370 PF02803 Thiolase, C-terminal domain XI92_15375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XI92_15375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XI92_15380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XI92_15380 PF02770 Acyl-CoA dehydrogenase, middle domain XI92_15380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XI92_15385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XI92_15385 PF02770 Acyl-CoA dehydrogenase, middle domain XI92_15385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XI92_15395 PF05066 HB1, ASXL, restriction endonuclease HTH domain XI92_15400 PF00117 Glutamine amidotransferase class-I XI92_15400 PF06418 CTP synthase N-terminus XI92_15405 PF10740 Domain of unknown function (DUF2529) XI92_15410 PF00072 Response regulator receiver domain XI92_15415 PF01116 Fructose-bisphosphate aldolase class-II XI92_15420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XI92_15425 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded XI92_15430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XI92_15430 PF07498 Rho termination factor, N-terminal domain XI92_15430 PF07497 Rho termination factor, RNA-binding domain XI92_15435 PF01197 Ribosomal protein L31 XI92_15440 PF00265 Thymidine kinase XI92_15445 PF03462 PCRF domain XI92_15445 PF00472 RF-1 domain XI92_15450 PF17827 PrmC N-terminal domain XI92_15450 PF13847 Methyltransferase domain XI92_15455 PF09551 Stage II sporulation protein R (spore_II_R) XI92_15465 PF03481 Putative GTP-binding controlling metal-binding XI92_15465 PF01300 Telomere recombination XI92_15470 PF02659 Putative manganese efflux pump XI92_15485 PF01613 Flavin reductase like domain XI92_15490 PF07681 DoxX XI92_15495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XI92_15500 PF01451 Low molecular weight phosphotyrosine protein phosphatase XI92_15505 PF02502 Ribose/Galactose Isomerase XI92_15510 PF04260 Protein of unknown function (DUF436) XI92_15515 PF00464 Serine hydroxymethyltransferase XI92_15535 PF03899 ATP synthase I chain XI92_15540 PF00119 ATP synthase A chain XI92_15545 PF00137 ATP synthase subunit C XI92_15550 PF00430 ATP synthase B/B' CF(0) XI92_15555 PF00213 ATP synthase delta (OSCP) subunit XI92_15560 PF02874 ATP synthase alpha/beta family, beta-barrel domain XI92_15560 PF00306 ATP synthase alpha/beta chain, C terminal domain XI92_15560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XI92_15565 PF00231 ATP synthase XI92_15570 PF02874 ATP synthase alpha/beta family, beta-barrel domain XI92_15570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XI92_15575 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XI92_15575 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XI92_15595 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XI92_15600 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XI92_15605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XI92_15610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XI92_15615 PF00146 NADH dehydrogenase XI92_15625 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XI92_15630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XI92_15635 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus XI92_15635 PF00361 Proton-conducting membrane transporter XI92_15635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XI92_15640 PF00361 Proton-conducting membrane transporter XI92_15645 PF00361 Proton-conducting membrane transporter XI92_15650 PF06612 Protein of unknown function (DUF1146) XI92_15660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XI92_15665 PF08486 Stage II sporulation protein XI92_15670 PF04397 LytTr DNA-binding domain XI92_15670 PF00072 Response regulator receiver domain XI92_15675 PF00005 ABC transporter XI92_15685 PF01551 Peptidase family M23 XI92_15695 PF12116 Stage III sporulation protein D XI92_15705 PF07977 FabA-like domain XI92_15710 PF13614 AAA domain XI92_15715 PF02706 Chain length determinant protein XI92_15715 PF13807 G-rich domain on putative tyrosine kinase XI92_15720 PF13614 AAA domain XI92_15730 PF00483 Nucleotidyl transferase XI92_15735 PF02397 Bacterial sugar transferase XI92_15745 PF00535 Glycosyl transferase family 2 XI92_15755 PF13439 Glycosyltransferase Family 4 XI92_15755 PF00534 Glycosyl transferases group 1 XI92_15760 PF00535 Glycosyl transferase family 2 XI92_15765 PF00535 Glycosyl transferase family 2 XI92_15770 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XI92_15770 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XI92_15770 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XI92_15775 PF16363 GDP-mannose 4,6 dehydratase XI92_15790 PF00072 Response regulator receiver domain XI92_15790 PF00486 Transcriptional regulatory protein, C terminal XI92_15795 PF00989 PAS fold XI92_15795 PF00512 His Kinase A (phospho-acceptor) domain XI92_15795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_15795 PF16736 Single Cache-like XI92_15810 PF07690 Major Facilitator Superfamily XI92_15820 PF00005 ABC transporter XI92_15825 PF02687 FtsX-like permease family XI92_15825 PF12704 MacB-like periplasmic core domain XI92_15830 PF04893 Yip1 domain XI92_15835 PF04542 Sigma-70 region 2 XI92_15835 PF04545 Sigma-70, region 4 XI92_15865 PF12419 SNF2 Helicase protein XI92_15865 PF00271 Helicase conserved C-terminal domain XI92_15865 PF00176 SNF2 family N-terminal domain XI92_15870 PF04434 SWIM zinc finger XI92_15895 PF06725 3D domain XI92_15895 PF01476 LysM domain XI92_15900 PF02028 BCCT, betaine/carnitine/choline family transporter XI92_15920 PF07662 Na+ dependent nucleoside transporter C-terminus XI92_15920 PF01773 Na+ dependent nucleoside transporter N-terminus XI92_15925 PF01476 LysM domain XI92_15925 PF00877 NlpC/P60 family XI92_15930 PF01063 Amino-transferase class IV XI92_15935 PF00884 Sulfatase XI92_15945 PF09988 Uncharacterized metal-binding protein (DUF2227) XI92_15955 PF01385 Probable transposase XI92_15955 PF12323 Helix-turn-helix domain XI92_15955 PF07282 Putative transposase DNA-binding domain XI92_15960 PF02652 L-lactate permease XI92_15965 PF13667 ThiC-associated domain XI92_15965 PF01964 Radical SAM ThiC family XI92_15970 PF02040 Arsenical pump membrane protein XI92_15975 PF02322 Cytochrome bd terminal oxidase subunit II XI92_15980 PF01654 Cytochrome bd terminal oxidase subunit I XI92_15995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_15995 PF03466 LysR substrate binding domain XI92_16015 PF00375 Sodium:dicarboxylate symporter family XI92_16020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XI92_16025 PF02378 Phosphotransferase system, EIIC XI92_16030 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit XI92_16035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XI92_16040 PF02378 Phosphotransferase system, EIIC XI92_16045 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit XI92_16050 PF02056 Family 4 glycosyl hydrolase XI92_16050 PF11975 Family 4 glycosyl hydrolase C-terminal domain XI92_16055 PF04794 YdjC-like protein XI92_16060 PF02417 Chromate transporter XI92_16070 PF00874 PRD domain XI92_16070 PF00158 Sigma-54 interaction domain XI92_16070 PF03610 PTS system fructose IIA component XI92_16080 PF00953 Glycosyl transferase family 4 XI92_16085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XI92_16085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XI92_16085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XI92_16090 PF02350 UDP-N-acetylglucosamine 2-epimerase XI92_16095 PF03816 Cell envelope-related transcriptional attenuator domain XI92_16100 PF09186 Domain of unknown function (DUF1949) XI92_16100 PF01205 Uncharacterized protein family UPF0029 XI92_16105 PF02645 Uncharacterised protein, DegV family COG1307 XI92_16110 PF01638 HxlR-like helix-turn-helix XI92_16115 PF01476 LysM domain XI92_16115 PF00877 NlpC/P60 family XI92_16130 PF00313 'Cold-shock' DNA-binding domain XI92_16135 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XI92_16135 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus XI92_16165 PF00005 ABC transporter XI92_16175 PF01043 SecA preprotein cross-linking domain XI92_16175 PF07516 SecA Wing and Scaffold domain XI92_16175 PF07517 SecA DEAD-like domain XI92_16175 PF02810 SEC-C motif XI92_16180 PF03462 PCRF domain XI92_16180 PF00472 RF-1 domain XI92_16190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XI92_16195 PF00005 ABC transporter XI92_16200 PF02687 FtsX-like permease family XI92_16200 PF18075 FtsX extracellular domain XI92_16205 PF17820 PDZ domain XI92_16205 PF03572 Peptidase family S41 XI92_16205 PF01471 Putative peptidoglycan binding domain XI92_16210 PF17820 PDZ domain XI92_16215 PF00664 ABC transporter transmembrane region XI92_16215 PF00005 ABC transporter XI92_16220 PF01906 Putative heavy-metal-binding XI92_16230 PF03358 NADPH-dependent FMN reductase XI92_16235 PF00376 MerR family regulatory protein XI92_16235 PF09278 MerR, DNA binding XI92_16240 PF03466 LysR substrate binding domain XI92_16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_16260 PF13411 MerR HTH family regulatory protein XI92_16260 PF07739 TipAS antibiotic-recognition domain XI92_16275 PF12344 Ultra-violet resistance protein B XI92_16275 PF02151 UvrB/uvrC motif XI92_16275 PF04851 Type III restriction enzyme, res subunit XI92_16275 PF17757 UvrB interaction domain XI92_16275 PF00271 Helicase conserved C-terminal domain XI92_16280 PF17755 UvrA DNA-binding domain XI92_16280 PF17760 UvrA interaction domain XI92_16280 PF00005 ABC transporter XI92_16290 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV XI92_16295 PF07475 HPr Serine kinase C-terminal domain XI92_16295 PF02603 HPr Serine kinase N terminus XI92_16300 PF01790 Prolipoprotein diacylglyceryl transferase XI92_16305 PF13419 Haloacid dehalogenase-like hydrolase XI92_16310 PF14602 Hexapeptide repeat of succinyl-transferase XI92_16320 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_16330 PF00293 NUDIX domain XI92_16335 PF03668 P-loop ATPase protein family XI92_16340 PF01933 Uncharacterised protein family UPF0052 XI92_16350 PF00381 PTS HPr component phosphorylation site XI92_16355 PF00574 Clp protease XI92_16360 PF04239 Protein of unknown function (DUF421) XI92_16370 PF03862 SpoVAC/SpoVAEB sporulation membrane protein XI92_16375 PF07451 Stage V sporulation protein AD (SpoVAD) XI92_16380 PF03862 SpoVAC/SpoVAEB sporulation membrane protein XI92_16400 PF14659 Phage integrase, N-terminal SAM-like domain XI92_16400 PF00589 Phage integrase family XI92_16425 PF10549 ORF11CD3 domain XI92_16425 PF09669 Phage regulatory protein Rha (Phage_pRha) XI92_16505 PF03838 Recombination protein U XI92_16575 PF00574 Clp protease XI92_16640 PF01548 Transposase XI92_16640 PF02371 Transposase IS116/IS110/IS902 family XI92_16645 PF05105 Bacteriophage holin family XI92_16650 PF02371 Transposase IS116/IS110/IS902 family XI92_16650 PF01548 Transposase XI92_16655 PF01476 LysM domain XI92_16655 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_16655 PF01471 Putative peptidoglycan binding domain XI92_16660 PF18801 response regulator aspartate phosphatase H, N terminal XI92_16690 PF00309 Sigma-54 factor, Activator interacting domain (AID) XI92_16690 PF04552 Sigma-54, DNA binding domain XI92_16690 PF04963 Sigma-54 factor, core binding domain XI92_16700 PF04198 Putative sugar-binding domain XI92_16705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XI92_16705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XI92_16710 PF00162 Phosphoglycerate kinase XI92_16715 PF00121 Triosephosphate isomerase XI92_16720 PF06415 BPG-independent PGAM N-terminus (iPGM_N) XI92_16720 PF01676 Metalloenzyme superfamily XI92_16725 PF03952 Enolase, N-terminal domain XI92_16725 PF00113 Enolase, C-terminal TIM barrel domain XI92_16730 PF01156 Inosine-uridine preferring nucleoside hydrolase XI92_16735 PF03788 LrgA family XI92_16740 PF04172 LrgB-like family XI92_16745 PF03840 Preprotein translocase SecG subunit XI92_16750 PF12146 Serine aminopeptidase, S33 XI92_16755 PF08206 Ribonuclease B OB domain XI92_16755 PF00575 S1 RNA binding domain XI92_16755 PF17876 Cold shock domain XI92_16755 PF00773 RNB domain XI92_16760 PF01668 SmpB protein XI92_16780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_16785 PF01609 Transposase DDE domain XI92_16795 PF00486 Transcriptional regulatory protein, C terminal XI92_16795 PF00072 Response regulator receiver domain XI92_16805 PF01032 FecCD transport family XI92_16810 PF01032 FecCD transport family XI92_16815 PF00005 ABC transporter XI92_16825 PF17440 Thiol-activated cytolysin beta sandwich domain XI92_16825 PF01289 Thiol-activated cytolysin XI92_16840 PF06146 Phosphate-starvation-inducible E XI92_16845 PF13302 Acetyltransferase (GNAT) domain XI92_16850 PF00005 ABC transporter XI92_16850 PF12848 ABC transporter XI92_16855 PF07690 Major Facilitator Superfamily XI92_16870 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XI92_16875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XI92_16895 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XI92_16895 PF01565 FAD binding domain XI92_16900 PF00579 tRNA synthetases class I (W and Y) XI92_16900 PF01479 S4 domain XI92_16905 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_16910 PF07849 Protein of unknown function (DUF1641) XI92_16915 PF01638 HxlR-like helix-turn-helix XI92_16920 PF07690 Major Facilitator Superfamily XI92_16925 PF00248 Aldo/keto reductase family XI92_16940 PF13460 NAD(P)H-binding XI92_16945 PF01235 Sodium:alanine symporter family XI92_16950 PF01235 Sodium:alanine symporter family XI92_16955 PF07662 Na+ dependent nucleoside transporter C-terminus XI92_16955 PF01773 Na+ dependent nucleoside transporter N-terminus XI92_16965 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_16965 PF01348 Type II intron maturase XI92_16970 PF07670 Nucleoside recognition XI92_16970 PF07662 Na+ dependent nucleoside transporter C-terminus XI92_16970 PF01773 Na+ dependent nucleoside transporter N-terminus XI92_16975 PF07662 Na+ dependent nucleoside transporter C-terminus XI92_16975 PF01773 Na+ dependent nucleoside transporter N-terminus XI92_16980 PF07786 Protein of unknown function (DUF1624) XI92_16980 PF04235 Protein of unknown function (DUF418) XI92_16985 PF00210 Ferritin-like domain XI92_16995 PF03641 Possible lysine decarboxylase XI92_17010 PF00210 Ferritin-like domain XI92_17015 PF01235 Sodium:alanine symporter family XI92_17025 PF02080 TrkA-C domain XI92_17030 PF00999 Sodium/hydrogen exchanger family XI92_17035 PF09335 SNARE associated Golgi protein XI92_17045 PF01047 MarR family XI92_17050 PF02678 Pirin XI92_17050 PF17954 Quercetinase C-terminal cupin domain XI92_17055 PF03413 Peptidase propeptide and YPEB domain XI92_17055 PF07504 Fungalysin/Thermolysin Propeptide Motif XI92_17055 PF01447 Thermolysin metallopeptidase, catalytic domain XI92_17055 PF02868 Thermolysin metallopeptidase, alpha-helical domain XI92_17060 PF01883 Iron-sulfur cluster assembly protein XI92_17065 PF02743 Cache domain XI92_17065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_17065 PF00672 HAMP domain XI92_17070 PF02743 Cache domain XI92_17070 PF00672 HAMP domain XI92_17070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_17080 PF08264 Anticodon-binding domain of tRNA XI92_17080 PF09334 tRNA synthetases class I (M) XI92_17095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_17095 PF00512 His Kinase A (phospho-acceptor) domain XI92_17095 PF00989 PAS fold XI92_17095 PF16736 Single Cache-like XI92_17100 PF00486 Transcriptional regulatory protein, C terminal XI92_17100 PF00072 Response regulator receiver domain XI92_17105 PF03734 L,D-transpeptidase catalytic domain XI92_17105 PF17969 L,D-transpeptidase C-terminal domain XI92_17115 PF09335 SNARE associated Golgi protein XI92_17150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_17150 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_17160 PF02096 60Kd inner membrane protein XI92_17170 PF13520 Amino acid permease XI92_17175 PF07690 Major Facilitator Superfamily XI92_17190 PF00672 HAMP domain XI92_17190 PF02743 Cache domain XI92_17190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_17195 PF01910 Thiamine-binding protein XI92_17200 PF10835 Protein of unknown function (DUF2573) XI92_17205 PF01619 Proline dehydrogenase XI92_17210 PF00768 D-alanyl-D-alanine carboxypeptidase XI92_17210 PF07943 Penicillin-binding protein 5, C-terminal domain XI92_17215 PF14115 YuzL-like protein XI92_17220 PF00378 Enoyl-CoA hydratase/isomerase XI92_17220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XI92_17220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XI92_17225 PF00108 Thiolase, N-terminal domain XI92_17225 PF02803 Thiolase, C-terminal domain XI92_17230 PF02770 Acyl-CoA dehydrogenase, middle domain XI92_17230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XI92_17230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XI92_17235 PF00753 Metallo-beta-lactamase superfamily XI92_17240 PF13305 Tetracyclin repressor-like, C-terminal domain XI92_17240 PF00440 Bacterial regulatory proteins, tetR family XI92_17255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XI92_17255 PF00056 lactate/malate dehydrogenase, NAD binding domain XI92_17275 PF03960 ArsC family XI92_17280 PF01597 Glycine cleavage H-protein XI92_17285 PF01751 Toprim domain XI92_17290 PF00085 Thioredoxin XI92_17300 PF00005 ABC transporter XI92_17300 PF09383 NIL domain XI92_17305 PF00528 Binding-protein-dependent transport system inner membrane component XI92_17310 PF03180 NLPA lipoprotein XI92_17315 PF03180 NLPA lipoprotein XI92_17320 PF00005 ABC transporter XI92_17325 PF01458 Uncharacterized protein family (UPF0051) XI92_17330 PF00266 Aminotransferase class-V XI92_17335 PF01592 NifU-like N terminal domain XI92_17340 PF01458 Uncharacterized protein family (UPF0051) XI92_17345 PF02872 5'-nucleotidase, C-terminal domain XI92_17350 PF08827 Domain of unknown function (DUF1805) XI92_17355 PF09560 Sporulation protein YunB (Spo_YunB) XI92_17360 PF01551 Peptidase family M23 XI92_17365 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XI92_17365 PF04055 Radical SAM superfamily XI92_17385 PF10086 YhfC intramembrane metalloprotease XI92_17390 PF07739 TipAS antibiotic-recognition domain XI92_17390 PF13411 MerR HTH family regulatory protein XI92_17395 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) XI92_17400 PF06265 Protein of unknown function (DUF1027) XI92_17425 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded XI92_17430 PF01934 Protein of unknown function DUF86 XI92_17440 PF13344 Haloacid dehalogenase-like hydrolase XI92_17445 PF02525 Flavodoxin-like fold XI92_17455 PF11202 Phosphoribosyl transferase (PRTase) XI92_17455 PF15608 PELOTA RNA binding domain XI92_17475 PF04608 Phosphatidylglycerophosphatase A XI92_17490 PF01106 NifU-like domain XI92_17540 PF08274 PhnA Zinc-Ribbon XI92_17540 PF03831 PhnA domain XI92_17545 PF03649 Uncharacterised protein family (UPF0014) XI92_17550 PF03412 Peptidase C39 family XI92_17550 PF00005 ABC transporter XI92_17550 PF00664 ABC transporter transmembrane region XI92_17560 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_17565 PF07293 Protein of unknown function (DUF1450) XI92_17570 PF01678 Diaminopimelate epimerase XI92_17575 PF01521 Iron-sulphur cluster biosynthesis XI92_17580 PF13333 Integrase core domain XI92_17580 PF13276 HTH-like domain XI92_17580 PF00665 Integrase core domain XI92_17620 PF01381 Helix-turn-helix XI92_17710 PF00589 Phage integrase family XI92_17760 PF03354 Phage Terminase XI92_17770 PF00574 Clp protease XI92_17830 PF05105 Bacteriophage holin family XI92_17835 PF01471 Putative peptidoglycan binding domain XI92_17835 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_17835 PF01476 LysM domain XI92_17895 PF04463 Protein of unknown function (DUF523) XI92_17910 PF06445 GyrI-like small molecule binding domain XI92_17920 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_17925 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_17930 PF00293 NUDIX domain XI92_17930 PF13344 Haloacid dehalogenase-like hydrolase XI92_17940 PF06725 3D domain XI92_17945 PF00883 Cytosol aminopeptidase family, catalytic domain XI92_17945 PF02789 Cytosol aminopeptidase family, N-terminal domain XI92_17950 PF10372 Bacterial membrane-spanning protein N-terminus XI92_17950 PF02457 DisA bacterial checkpoint controller nucleotide-binding XI92_17955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XI92_17955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XI92_17955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XI92_17955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XI92_17960 PF00483 Nucleotidyl transferase XI92_17965 PF02632 BioY family XI92_17975 PF03061 Thioesterase superfamily XI92_17980 PF13333 Integrase core domain XI92_17980 PF00665 Integrase core domain XI92_17980 PF13276 HTH-like domain XI92_17990 PF03129 Anticodon binding domain XI92_17990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XI92_18005 PF03600 Citrate transporter XI92_18010 PF00929 Exonuclease XI92_18015 PF08810 Kinase associated protein B XI92_18030 PF00155 Aminotransferase class I and II XI92_18040 PF00561 alpha/beta hydrolase fold XI92_18040 PF08386 TAP-like protein XI92_18045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XI92_18045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XI92_18050 PF01037 Lrp/AsnC ligand binding domain XI92_18055 PF00155 Aminotransferase class I and II XI92_18060 PF00575 S1 RNA binding domain XI92_18065 PF04070 Domain of unknown function (DUF378) XI92_18075 PF00342 Phosphoglucose isomerase XI92_18080 PF08868 YugN-like family XI92_18085 PF07885 Ion channel XI92_18085 PF02254 TrkA-N domain XI92_18090 PF02308 MgtC family XI92_18125 PF05698 Bacterial trigger factor protein (TF) C-terminus XI92_18125 PF05697 Bacterial trigger factor protein (TF) XI92_18220 PF00056 lactate/malate dehydrogenase, NAD binding domain XI92_18220 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XI92_18235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XI92_18235 PF00128 Alpha amylase, catalytic domain XI92_18235 PF02806 Alpha amylase, C-terminal all-beta domain XI92_18240 PF00483 Nucleotidyl transferase XI92_18245 PF00483 Nucleotidyl transferase XI92_18250 PF08323 Starch synthase catalytic domain XI92_18250 PF00534 Glycosyl transferases group 1 XI92_18255 PF00343 Carbohydrate phosphorylase XI92_18275 PF01609 Transposase DDE domain XI92_18285 PF00313 'Cold-shock' DNA-binding domain XI92_18290 PF01258 Prokaryotic dksA/traR C4-type zinc finger XI92_18295 PF01040 UbiA prenyltransferase family XI92_18300 PF00425 chorismate binding enzyme XI92_18305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XI92_18305 PF16582 Middle domain of thiamine pyrophosphate XI92_18305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XI92_18310 PF12697 Alpha/beta hydrolase family XI92_18315 PF00378 Enoyl-CoA hydratase/isomerase XI92_18320 PF00501 AMP-binding enzyme XI92_18320 PF13193 AMP-binding enzyme C-terminal domain XI92_18335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XI92_18335 PF13378 Enolase C-terminal domain-like XI92_18340 PF00072 Response regulator receiver domain XI92_18340 PF00486 Transcriptional regulatory protein, C terminal XI92_18345 PF00512 His Kinase A (phospho-acceptor) domain XI92_18345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_18350 PF02557 D-alanyl-D-alanine carboxypeptidase XI92_18355 PF01979 Amidohydrolase family XI92_18360 PF03841 L-seryl-tRNA selenium transferase XI92_18365 PF07071 KDGP aldolase XI92_18380 PF00665 Integrase core domain XI92_18380 PF13333 Integrase core domain XI92_18390 PF02447 GntP family permease XI92_18400 PF13977 BetI-type transcriptional repressor, C-terminal XI92_18400 PF00440 Bacterial regulatory proteins, tetR family XI92_18410 PF02687 FtsX-like permease family XI92_18415 PF00005 ABC transporter XI92_18420 PF02687 FtsX-like permease family XI92_18425 PF02687 FtsX-like permease family XI92_18430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_18435 PF00486 Transcriptional regulatory protein, C terminal XI92_18435 PF00072 Response regulator receiver domain XI92_18440 PF01022 Bacterial regulatory protein, arsR family XI92_18445 PF13630 SdpI/YhfL protein family XI92_18445 PF07853 Protein of unknown function (DUF1648) XI92_18455 PF12833 Helix-turn-helix domain XI92_18455 PF06445 GyrI-like small molecule binding domain XI92_18460 PF00005 ABC transporter XI92_18465 PF02687 FtsX-like permease family XI92_18470 PF00398 Ribosomal RNA adenine dimethylase XI92_18475 PF09335 SNARE associated Golgi protein XI92_18500 PF00781 Diacylglycerol kinase catalytic domain XI92_18530 PF00072 Response regulator receiver domain XI92_18530 PF00486 Transcriptional regulatory protein, C terminal XI92_18535 PF00672 HAMP domain XI92_18535 PF00512 His Kinase A (phospho-acceptor) domain XI92_18535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_18540 PF09515 Thiamine transporter protein (Thia_YuaJ) XI92_18550 PF07664 Ferrous iron transport protein B C terminus XI92_18550 PF07670 Nucleoside recognition XI92_18550 PF02421 Ferrous iron transport protein B XI92_18550 PF17910 FeoB cytosolic helical domain XI92_18565 PF04012 PspA/IM30 family XI92_18590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_18590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_18600 PF10676 Spore germination protein gerPA/gerPF XI92_18605 PF02322 Cytochrome bd terminal oxidase subunit II XI92_18610 PF01654 Cytochrome bd terminal oxidase subunit I XI92_18615 PF00484 Carbonic anhydrase XI92_18620 PF01809 Putative membrane protein insertion efficiency factor XI92_18625 PF02664 S-Ribosylhomocysteinase (LuxS) XI92_18655 PF00293 NUDIX domain XI92_18660 PF13419 Haloacid dehalogenase-like hydrolase XI92_18675 PF00528 Binding-protein-dependent transport system inner membrane component XI92_18680 PF00005 ABC transporter XI92_18705 PF00884 Sulfatase XI92_18710 PF00561 alpha/beta hydrolase fold XI92_18710 PF08386 TAP-like protein XI92_18720 PF00512 His Kinase A (phospho-acceptor) domain XI92_18720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_18720 PF02743 Cache domain XI92_18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_18725 PF13426 PAS domain XI92_18725 PF00512 His Kinase A (phospho-acceptor) domain XI92_18725 PF13188 PAS domain XI92_18725 PF00989 PAS fold XI92_18730 PF13419 Haloacid dehalogenase-like hydrolase XI92_18735 PF00455 DeoR C terminal sensor domain XI92_18735 PF08220 DeoR-like helix-turn-helix domain XI92_18740 PF13419 Haloacid dehalogenase-like hydrolase XI92_18775 PF01293 Phosphoenolpyruvate carboxykinase XI92_18780 PF02773 S-adenosylmethionine synthetase, C-terminal domain XI92_18780 PF00438 S-adenosylmethionine synthetase, N-terminal domain XI92_18780 PF02772 S-adenosylmethionine synthetase, central domain XI92_18785 PF13302 Acetyltransferase (GNAT) domain XI92_18800 PF00994 Probable molybdopterin binding domain XI92_18805 PF12804 MobA-like NTP transferase domain XI92_18810 PF13439 Glycosyltransferase Family 4 XI92_18810 PF00534 Glycosyl transferases group 1 XI92_18815 PF01569 PAP2 superfamily XI92_18820 PF00132 Bacterial transferase hexapeptide (six repeats) XI92_18825 PF12146 Serine aminopeptidase, S33 XI92_18830 PF10776 Protein of unknown function (DUF2600) XI92_18845 PF01177 Asp/Glu/Hydantoin racemase XI92_18850 PF06962 Putative rRNA methylase XI92_18855 PF16199 Radical_SAM C-terminal domain XI92_18855 PF04055 Radical SAM superfamily XI92_18860 PF10732 Protein of unknown function (DUF2524) XI92_18870 PF07786 Protein of unknown function (DUF1624) XI92_18870 PF04235 Protein of unknown function (DUF418) XI92_18875 PF00005 ABC transporter XI92_18885 PF00589 Phage integrase family XI92_18890 PF02080 TrkA-C domain XI92_18895 PF00999 Sodium/hydrogen exchanger family XI92_18900 PF07690 Major Facilitator Superfamily XI92_18905 PF09334 tRNA synthetases class I (M) XI92_18905 PF00133 tRNA synthetases class I (I, L, M and V) XI92_18905 PF13603 Leucyl-tRNA synthetase, Domain 2 XI92_18905 PF08264 Anticodon-binding domain of tRNA XI92_18935 PF03845 Spore germination protein XI92_18940 PF03323 Bacillus/Clostridium GerA spore germination protein XI92_18960 PF00581 Rhodanese-like domain XI92_18980 PF04055 Radical SAM superfamily XI92_18980 PF06463 Molybdenum Cofactor Synthesis C XI92_18985 PF00899 ThiF family XI92_18990 PF01967 MoaC family XI92_18995 PF03453 MoeA N-terminal region (domain I and II) XI92_18995 PF03454 MoeA C-terminal region (domain IV) XI92_18995 PF00994 Probable molybdopterin binding domain XI92_19000 PF03205 Molybdopterin guanine dinucleotide synthesis protein B XI92_19005 PF02391 MoaE protein XI92_19020 PF06800 Sugar transport protein XI92_19030 PF02559 CarD-like/TRCF domain XI92_19045 PF10957 Sporulation protein Cse60 XI92_19055 PF08327 Activator of Hsp90 ATPase homolog 1-like protein XI92_19060 PF01022 Bacterial regulatory protein, arsR family XI92_19065 PF07690 Major Facilitator Superfamily XI92_19075 PF01943 Polysaccharide biosynthesis protein XI92_19075 PF14667 Polysaccharide biosynthesis C-terminal domain XI92_19080 PF01479 S4 domain XI92_19080 PF00849 RNA pseudouridylate synthase XI92_19085 PF08220 DeoR-like helix-turn-helix domain XI92_19090 PF01546 Peptidase family M20/M25/M40 XI92_19095 PF02834 LigT like Phosphoesterase XI92_19100 PF00128 Alpha amylase, catalytic domain XI92_19100 PF17999 Pullulanase N1-terminal domain XI92_19100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XI92_19105 PF01636 Phosphotransferase enzyme family XI92_19110 PF14165 YtzH-like protein XI92_19115 PF02390 Putative methyltransferase XI92_19120 PF00753 Metallo-beta-lactamase superfamily XI92_19130 PF05343 M42 glutamyl aminopeptidase XI92_19135 PF01931 Protein of unknown function DUF84 XI92_19140 PF00085 Thioredoxin XI92_19145 PF07285 Protein of unknown function (DUF1444) XI92_19150 PF14794 Domain of unknown function (DUF4479) XI92_19150 PF01588 Putative tRNA binding domain XI92_19160 PF01520 N-acetylmuramoyl-L-alanine amidase XI92_19160 PF08239 Bacterial SH3 domain XI92_19165 PF17854 FtsK alpha domain XI92_19165 PF09397 Ftsk gamma domain XI92_19165 PF01580 FtsK/SpoIIIE family XI92_19175 PF01225 Mur ligase family, catalytic domain XI92_19175 PF08245 Mur ligase middle domain XI92_19175 PF02875 Mur ligase family, glutamate ligase domain XI92_19180 PF13302 Acetyltransferase (GNAT) domain XI92_19195 PF02073 Thermophilic metalloprotease (M29) XI92_19205 PF11009 Protein of unknown function (DUF2847) XI92_19210 PF07537 CamS sex pheromone cAM373 precursor XI92_19215 PF00793 DAHP synthetase I family XI92_19215 PF01817 Chorismate mutase type II XI92_19225 PF00356 Bacterial regulatory proteins, lacI family XI92_19250 PF01741 Large-conductance mechanosensitive channel, MscL XI92_19255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XI92_19260 PF00072 Response regulator receiver domain XI92_19260 PF04397 LytTr DNA-binding domain XI92_19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_19280 PF06580 Histidine kinase XI92_19285 PF12796 Ankyrin repeats (3 copies) XI92_19290 PF13426 PAS domain XI92_19290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_19290 PF00672 HAMP domain XI92_19290 PF00512 His Kinase A (phospho-acceptor) domain XI92_19295 PF00072 Response regulator receiver domain XI92_19295 PF00486 Transcriptional regulatory protein, C terminal XI92_19310 PF00850 Histone deacetylase domain XI92_19315 PF00571 CBS domain XI92_19320 PF00583 Acetyltransferase (GNAT) family XI92_19325 PF00501 AMP-binding enzyme XI92_19325 PF13193 AMP-binding enzyme C-terminal domain XI92_19330 PF14602 Hexapeptide repeat of succinyl-transferase XI92_19330 PF12464 Maltose acetyltransferase XI92_19340 PF04542 Sigma-70 region 2 XI92_19340 PF08281 Sigma-70, region 4 XI92_19350 PF00579 tRNA synthetases class I (W and Y) XI92_19350 PF01479 S4 domain XI92_19375 PF01479 S4 domain XI92_19375 PF00163 Ribosomal protein S4/S9 N-terminal domain XI92_19380 PF01053 Cys/Met metabolism PLP-dependent enzyme XI92_19385 PF13185 GAF domain XI92_19390 PF00440 Bacterial regulatory proteins, tetR family XI92_19395 PF00892 EamA-like transporter family XI92_19400 PF03466 LysR substrate binding domain XI92_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_19405 PF06160 Septation ring formation regulator, EzrA XI92_19410 PF00266 Aminotransferase class-V XI92_19415 PF02926 THUMP domain XI92_19415 PF02568 Thiamine biosynthesis protein (ThiI) XI92_19420 PF00269 Small, acid-soluble spore proteins, alpha/beta type XI92_19425 PF13193 AMP-binding enzyme C-terminal domain XI92_19425 PF00501 AMP-binding enzyme XI92_19435 PF07969 Amidohydrolase family XI92_19440 PF01513 ATP-NAD kinase XI92_19450 PF09579 Sporulation protein YtfJ (Spore_YtfJ) XI92_19455 PF08534 Redoxin XI92_19460 PF02384 N-6 DNA Methylase XI92_19465 PF00871 Acetokinase family XI92_19480 PF12787 EcsC protein family XI92_19485 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_19485 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_19495 PF01609 Transposase DDE domain XI92_19505 PF00764 Arginosuccinate synthase XI92_19510 PF14698 Argininosuccinate lyase C-terminal XI92_19510 PF00206 Lyase XI92_19530 PF00582 Universal stress protein family XI92_19540 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XI92_19540 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XI92_19550 PF07883 Cupin domain XI92_19585 PF00557 Metallopeptidase family M24 XI92_19585 PF01321 Creatinase/Prolidase N-terminal domain XI92_19600 PF07085 DRTGG domain XI92_19600 PF03061 Thioesterase superfamily XI92_19600 PF00571 CBS domain XI92_19600 PF00392 Bacterial regulatory proteins, gntR family XI92_19610 PF14007 YtpI-like protein XI92_19615 PF02272 DHHA1 domain XI92_19615 PF01368 DHH family XI92_19625 PF14034 Sporulation protein YtrH XI92_19630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XI92_19630 PF07733 Bacterial DNA polymerase III alpha NTPase domain XI92_19630 PF14579 Helix-hairpin-helix motif XI92_19630 PF02811 PHP domain XI92_19630 PF01336 OB-fold nucleic acid binding domain XI92_19635 PF03949 Malic enzyme, NAD binding domain XI92_19635 PF00390 Malic enzyme, N-terminal domain XI92_19640 PF00392 Bacterial regulatory proteins, gntR family XI92_19645 PF01039 Carboxyl transferase domain XI92_19645 PF17848 Acetyl-coA carboxylase zinc finger domain XI92_19650 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XI92_19655 PF00365 Phosphofructokinase XI92_19660 PF02887 Pyruvate kinase, alpha/beta domain XI92_19660 PF00224 Pyruvate kinase, barrel domain XI92_19660 PF00391 PEP-utilising enzyme, mobile domain XI92_19665 PF04186 FxsA cytoplasmic membrane protein XI92_19670 PF01594 AI-2E family transporter XI92_19675 PF04284 Protein of unknown function (DUF441) XI92_19685 PF00285 Citrate synthase, C-terminal domain XI92_19690 PF00180 Isocitrate/isopropylmalate dehydrogenase XI92_19695 PF00056 lactate/malate dehydrogenase, NAD binding domain XI92_19695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XI92_19710 PF00486 Transcriptional regulatory protein, C terminal XI92_19710 PF00072 Response regulator receiver domain XI92_19715 PF00512 His Kinase A (phospho-acceptor) domain XI92_19715 PF16736 Single Cache-like XI92_19715 PF00989 PAS fold XI92_19715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_19720 PF00476 DNA polymerase family A XI92_19720 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XI92_19720 PF01367 5'-3' exonuclease, C-terminal SAM fold XI92_19725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XI92_19725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XI92_19725 PF06827 Zinc finger found in FPG and IleRS XI92_19730 PF02659 Putative manganese efflux pump XI92_19735 PF01121 Dephospho-CoA kinase XI92_19740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XI92_19740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XI92_19745 PF02675 S-adenosylmethionine decarboxylase XI92_19750 PF03477 ATP cone domain XI92_19755 PF07261 Replication initiation and membrane attachment XI92_19760 PF07319 Primosomal protein DnaI N-terminus XI92_19760 PF01695 IstB-like ATP binding protein XI92_19765 PF13783 Domain of unknown function (DUF4177) XI92_19770 PF08812 YtxC-like family XI92_19775 PF02824 TGS domain XI92_19775 PF03129 Anticodon binding domain XI92_19775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XI92_19775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XI92_19780 PF00707 Translation initiation factor IF-3, C-terminal domain XI92_19780 PF05198 Translation initiation factor IF-3, N-terminal domain XI92_19790 PF00453 Ribosomal protein L20 XI92_19800 PF05343 M42 glutamyl aminopeptidase XI92_19805 PF00440 Bacterial regulatory proteins, tetR family XI92_19805 PF16859 Tetracyclin repressor-like, C-terminal domain XI92_19815 PF07690 Major Facilitator Superfamily XI92_19835 PF01966 HD domain XI92_19840 PF14098 Small, acid-soluble spore protein I XI92_19845 PF08032 RNA 2'-O ribose methyltransferase substrate binding XI92_19845 PF00588 SpoU rRNA Methylase family XI92_19850 PF01409 tRNA synthetases class II core domain (F) XI92_19850 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XI92_19855 PF03484 tRNA synthetase B5 domain XI92_19855 PF01588 Putative tRNA binding domain XI92_19855 PF03147 Ferredoxin-fold anticodon binding domain XI92_19855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XI92_19855 PF03483 B3/4 domain XI92_19860 PF01336 OB-fold nucleic acid binding domain XI92_19860 PF00152 tRNA synthetases class II (D, K and N) XI92_19880 PF01351 Ribonuclease HII XI92_19880 PF11858 Domain of unknown function (DUF3378) XI92_19885 PF05164 Cell division protein ZapA XI92_19890 PF02674 Colicin V production protein XI92_19895 PF14716 Helix-hairpin-helix domain XI92_19895 PF02811 PHP domain XI92_19895 PF14791 DNA polymerase beta thumb XI92_19900 PF01713 Smr domain XI92_19900 PF00488 MutS domain V XI92_19910 PF00849 RNA pseudouridylate synthase XI92_19910 PF01479 S4 domain XI92_19915 PF05525 Branched-chain amino acid transport protein XI92_19920 PF05031 Iron Transport-associated domain XI92_19930 PF05031 Iron Transport-associated domain XI92_19935 PF01497 Periplasmic binding protein XI92_19940 PF01032 FecCD transport family XI92_19945 PF00005 ABC transporter XI92_19950 PF04203 Sortase domain XI92_19955 PF03992 Antibiotic biosynthesis monooxygenase XI92_19960 PF17785 PUA-like domain XI92_19960 PF10672 S-adenosylmethionine-dependent methyltransferase XI92_19965 PF09962 Uncharacterized conserved protein (DUF2196) XI92_19975 PF00072 Response regulator receiver domain XI92_19975 PF00486 Transcriptional regulatory protein, C terminal XI92_19980 PF00512 His Kinase A (phospho-acceptor) domain XI92_19980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_19985 PF00005 ABC transporter XI92_20015 PF05163 DinB family XI92_20030 PF01497 Periplasmic binding protein XI92_20040 PF13193 AMP-binding enzyme C-terminal domain XI92_20040 PF00501 AMP-binding enzyme XI92_20045 PF08359 YsiA-like protein, C-terminal region XI92_20045 PF00440 Bacterial regulatory proteins, tetR family XI92_20050 PF00378 Enoyl-CoA hydratase/isomerase XI92_20055 PF01012 Electron transfer flavoprotein domain XI92_20060 PF01012 Electron transfer flavoprotein domain XI92_20060 PF00766 Electron transfer flavoprotein FAD-binding domain XI92_20065 PF00085 Thioredoxin XI92_20070 PF01541 GIY-YIG catalytic domain XI92_20070 PF02151 UvrB/uvrC motif XI92_20070 PF08459 UvrC Helix-hairpin-helix N-terminal XI92_20075 PF10702 Protein of unknown function (DUF2507) XI92_20080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XI92_20085 PF02910 Fumarate reductase flavoprotein C-term XI92_20085 PF00890 FAD binding domain XI92_20090 PF13183 4Fe-4S dicluster domain XI92_20090 PF13085 2Fe-2S iron-sulfur cluster binding domain XI92_20095 PF03061 Thioesterase superfamily XI92_20100 PF02557 D-alanyl-D-alanine carboxypeptidase XI92_20105 PF01618 MotA/TolQ/ExbB proton channel family XI92_20110 PF13677 Membrane MotB of proton-channel complex MotA/MotB XI92_20110 PF00691 OmpA family XI92_20115 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XI92_20120 PF13732 Domain of unknown function (DUF4162) XI92_20120 PF00005 ABC transporter XI92_20130 PF02082 Transcriptional regulator XI92_20135 PF00230 Major intrinsic protein XI92_20140 PF13536 Putative multidrug resistance efflux transporter XI92_20145 PF07883 Cupin domain XI92_20145 PF01381 Helix-turn-helix XI92_20150 PF04024 PspC domain XI92_20155 PF07969 Amidohydrolase family XI92_20160 PF00860 Permease family XI92_20165 PF00196 Bacterial regulatory proteins, luxR family XI92_20180 PF01177 Asp/Glu/Hydantoin racemase XI92_20185 PF10646 Sporulation and spore germination XI92_20190 PF03725 3' exoribonuclease family, domain 2 XI92_20190 PF01138 3' exoribonuclease family, domain 1 XI92_20195 PF01725 Ham1 family XI92_20200 PF12850 Calcineurin-like phosphoesterase superfamily domain XI92_20220 PF08000 Bacterial PH domain XI92_20220 PF11724 YvbH-like oligomerisation region XI92_20235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XI92_20235 PF05697 Bacterial trigger factor protein (TF) XI92_20235 PF05698 Bacterial trigger factor protein (TF) C-terminus XI92_20240 PF07724 AAA domain (Cdc48 subfamily) XI92_20240 PF10431 C-terminal, D2-small domain, of ClpB protein XI92_20240 PF06689 ClpX C4-type zinc finger XI92_20245 PF05362 Lon protease (S16) C-terminal proteolytic domain XI92_20245 PF00004 ATPase family associated with various cellular activities (AAA) XI92_20250 PF00004 ATPase family associated with various cellular activities (AAA) XI92_20250 PF05362 Lon protease (S16) C-terminal proteolytic domain XI92_20250 PF02190 ATP-dependent protease La (LON) substrate-binding domain XI92_20255 PF01926 50S ribosome-binding GTPase XI92_20260 PF02566 OsmC-like protein XI92_20265 PF01047 MarR family XI92_20270 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XI92_20270 PF01488 Shikimate / quinate 5-dehydrogenase XI92_20270 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XI92_20275 PF01578 Cytochrome C assembly protein XI92_20280 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XI92_20280 PF03900 Porphobilinogen deaminase, C-terminal domain XI92_20285 PF02602 Uroporphyrinogen-III synthase HemD XI92_20290 PF00490 Delta-aminolevulinic acid dehydratase XI92_20295 PF00202 Aminotransferase class-III XI92_20300 PF01476 LysM domain XI92_20310 PF10458 Valyl tRNA synthetase tRNA binding arm XI92_20310 PF00133 tRNA synthetases class I (I, L, M and V) XI92_20310 PF08264 Anticodon-binding domain of tRNA XI92_20315 PF02875 Mur ligase family, glutamate ligase domain XI92_20315 PF08245 Mur ligase middle domain XI92_20325 PF02545 Maf-like protein XI92_20330 PF04002 RadC-like JAB domain XI92_20340 PF04085 rod shape-determining protein MreC XI92_20355 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XI92_20360 PF01551 Peptidase family M23 XI92_20365 PF02163 Peptidase family M50 XI92_20370 PF10150 Ribonuclease E/G family XI92_20370 PF00575 S1 RNA binding domain XI92_20375 PF00829 Ribosomal prokaryotic L21 protein XI92_20380 PF04327 Cysteine protease Prp XI92_20385 PF01016 Ribosomal L27 protein XI92_20390 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain XI92_20390 PF14682 Sporulation initiation phospho-transferase B, C-terminal XI92_20395 PF01926 50S ribosome-binding GTPase XI92_20395 PF09269 Domain of unknown function (DUF1967) XI92_20395 PF01018 GTP1/OBG XI92_20400 PF00486 Transcriptional regulatory protein, C terminal XI92_20400 PF00072 Response regulator receiver domain XI92_20405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_20410 PF00005 ABC transporter XI92_20415 PF02687 FtsX-like permease family XI92_20420 PF02687 FtsX-like permease family XI92_20425 PF00800 Prephenate dehydratase XI92_20425 PF01842 ACT domain XI92_20430 PF03473 MOSC domain XI92_20430 PF03475 3-alpha domain XI92_20435 PF02829 3H domain XI92_20435 PF08279 HTH domain XI92_20440 PF00266 Aminotransferase class-V XI92_20445 PF02910 Fumarate reductase flavoprotein C-term XI92_20445 PF00890 FAD binding domain XI92_20450 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XI92_20450 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XI92_20455 PF02445 Quinolinate synthetase A protein XI92_20460 PF01476 LysM domain XI92_20480 PF01497 Periplasmic binding protein XI92_20485 PF01330 RuvA N terminal domain XI92_20485 PF07499 RuvA, C-terminal domain XI92_20490 PF05496 Holliday junction DNA helicase RuvB P-loop domain XI92_20490 PF17864 RuvB AAA lid domain XI92_20490 PF05491 RuvB C-terminal winged helix domain XI92_20495 PF11146 Protein of unknown function (DUF2905) XI92_20500 PF02547 Queuosine biosynthesis protein XI92_20505 PF01702 Queuine tRNA-ribosyltransferase XI92_20510 PF02699 Preprotein translocase subunit XI92_20520 PF04239 Protein of unknown function (DUF421) XI92_20525 PF01943 Polysaccharide biosynthesis protein XI92_20525 PF14667 Polysaccharide biosynthesis C-terminal domain XI92_20530 PF13797 Post-transcriptional regulator XI92_20535 PF02355 Protein export membrane protein XI92_20535 PF07549 SecD/SecF GG Motif XI92_20540 PF16916 Dimerisation domain of Zinc Transporter XI92_20540 PF01545 Cation efflux family XI92_20545 PF17768 RecJ OB domain XI92_20545 PF02272 DHHA1 domain XI92_20545 PF10141 Single-strand DNA-specific exonuclease, C terminal domain XI92_20545 PF01368 DHH family XI92_20550 PF00156 Phosphoribosyl transferase domain XI92_20555 PF02824 TGS domain XI92_20555 PF04607 Region found in RelA / SpoT proteins XI92_20555 PF13291 ACT domain XI92_20560 PF02580 D-Tyr-tRNA(Tyr) deacylase XI92_20570 PF03129 Anticodon binding domain XI92_20570 PF13393 Histidyl-tRNA synthetase XI92_20575 PF01336 OB-fold nucleic acid binding domain XI92_20575 PF00152 tRNA synthetases class II (D, K and N) XI92_20575 PF02938 GAD domain XI92_20580 PF00899 ThiF family XI92_20595 PF05496 Holliday junction DNA helicase RuvB P-loop domain XI92_20595 PF12002 MgsA AAA+ ATPase C terminal XI92_20595 PF16193 AAA C-terminal domain XI92_20600 PF02082 Transcriptional regulator XI92_20605 PF00266 Aminotransferase class-V XI92_20620 PF13538 UvrD-like helicase C-terminal domain XI92_20620 PF14490 Helix-hairpin-helix containing domain XI92_20620 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain XI92_20640 PF01594 AI-2E family transporter XI92_20650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XI92_20650 PF01411 tRNA synthetases class II (A) XI92_20650 PF02272 DHHA1 domain XI92_20655 PF06135 IreB regulatory phosphoprotein XI92_20660 PF03652 Holliday junction resolvase XI92_20665 PF06949 Protein of unknown function (DUF1292) XI92_20670 PF02618 YceG-like family XI92_20690 PF00485 Phosphoribulokinase / Uridine kinase family XI92_20695 PF01272 Transcription elongation factor, GreA/GreB, C-term XI92_20695 PF03449 Transcription elongation factor, N-terminal XI92_20705 PF00905 Penicillin binding protein transpeptidase domain XI92_20705 PF03717 Penicillin-binding Protein dimerisation domain XI92_20725 PF01048 Phosphorylase superfamily XI92_20730 PF00291 Pyridoxal-phosphate dependent enzyme XI92_20735 PF01053 Cys/Met metabolism PLP-dependent enzyme XI92_20740 PF00465 Iron-containing alcohol dehydrogenase XI92_20740 PF00171 Aldehyde dehydrogenase family XI92_20745 PF14143 YrhC-like protein XI92_20750 PF01497 Periplasmic binding protein XI92_20755 PF01032 FecCD transport family XI92_20760 PF00005 ABC transporter XI92_20790 PF07681 DoxX XI92_20795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_20805 PF00351 Biopterin-dependent aromatic amino acid hydroxylase XI92_20825 PF00665 Integrase core domain XI92_20830 PF01695 IstB-like ATP binding protein XI92_20855 PF08386 TAP-like protein XI92_20855 PF00561 alpha/beta hydrolase fold XI92_20860 PF00583 Acetyltransferase (GNAT) family XI92_20865 PF00245 Alkaline phosphatase XI92_20875 PF04607 Region found in RelA / SpoT proteins XI92_20880 PF00881 Nitroreductase family XI92_20885 PF00471 Ribosomal protein L33 XI92_20890 PF16244 Domain of unknown function (DUF4901) XI92_20900 PF04545 Sigma-70, region 4 XI92_20900 PF04542 Sigma-70 region 2 XI92_20905 PF02666 Phosphatidylserine decarboxylase XI92_20920 PF01926 50S ribosome-binding GTPase XI92_20925 PF01488 Shikimate / quinate 5-dehydrogenase XI92_20925 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XI92_20925 PF08501 Shikimate dehydrogenase substrate binding domain XI92_20930 PF01985 CRS1 / YhbY (CRM) domain XI92_20935 PF01467 Cytidylyltransferase-like XI92_20940 PF01966 HD domain XI92_20950 PF13649 Methyltransferase domain XI92_20955 PF03807 NADP oxidoreductase coenzyme F420-dependent XI92_20955 PF14748 Pyrroline-5-carboxylate reductase dimerisation XI92_20960 PF10531 SLBB domain XI92_20965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XI92_20970 PF00753 Metallo-beta-lactamase superfamily XI92_20970 PF13567 Domain of unknown function (DUF4131) XI92_20970 PF03772 Competence protein XI92_20975 PF14141 YqzM-like protein XI92_20980 PF06144 DNA polymerase III, delta subunit XI92_20985 PF01649 Ribosomal protein S20 XI92_20990 PF03418 Germination protease XI92_21000 PF06421 GTP-binding protein LepA C-terminus XI92_21000 PF03144 Elongation factor Tu domain 2 XI92_21000 PF00679 Elongation factor G C-terminus XI92_21000 PF00009 Elongation factor Tu GTP binding domain XI92_21005 PF01638 HxlR-like helix-turn-helix XI92_21010 PF04055 Radical SAM superfamily XI92_21010 PF06969 HemN C-terminal domain XI92_21015 PF01628 HrcA protein C terminal domain XI92_21020 PF01025 GrpE XI92_21025 PF00012 Hsp70 protein XI92_21030 PF00226 DnaJ domain XI92_21030 PF01556 DnaJ C terminal domain XI92_21030 PF00684 DnaJ central domain XI92_21040 PF04452 RNA methyltransferase XI92_21045 PF04055 Radical SAM superfamily XI92_21045 PF01938 TRAM domain XI92_21045 PF00919 Uncharacterized protein family UPF0004 XI92_21050 PF01165 Ribosomal protein S21 XI92_21055 PF09424 Yqey-like protein XI92_21070 PF06898 Putative stage IV sporulation protein YqfD XI92_21080 PF07697 7TM-HD extracellular XI92_21080 PF01966 HD domain XI92_21080 PF07698 7TM receptor with intracellular HD hydrolase XI92_21085 PF02130 Uncharacterized protein family UPF0054 XI92_21090 PF01219 Prokaryotic diacylglycerol kinase XI92_21095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XI92_21100 PF07650 KH domain XI92_21100 PF01926 50S ribosome-binding GTPase XI92_21110 PF02565 Recombination protein O C terminal XI92_21110 PF11967 Recombination protein O N terminal XI92_21115 PF08279 HTH domain XI92_21115 PF00571 CBS domain XI92_21120 PF03618 Kinase/pyrophosphorylase XI92_21130 PF01807 CHC2 zinc finger XI92_21130 PF08275 DNA primase catalytic core, N-terminal domain XI92_21130 PF10410 DnaB-helicase binding domain of primase XI92_21135 PF04539 Sigma-70 region 3 XI92_21135 PF00140 Sigma-70 factor, region 1.2 XI92_21135 PF03979 Sigma-70 factor, region 1.1 XI92_21135 PF04545 Sigma-70, region 4 XI92_21135 PF04542 Sigma-70 region 2 XI92_21140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XI92_21145 PF04816 tRNA (adenine(22)-N(1))-methyltransferase XI92_21150 PF01784 NIF3 (NGG1p interacting factor 3) XI92_21165 PF00271 Helicase conserved C-terminal domain XI92_21165 PF00270 DEAD/DEAH box helicase XI92_21170 PF01261 Xylose isomerase-like TIM barrel XI92_21175 PF11116 Protein of unknown function (DUF2624) XI92_21180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_21180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_21185 PF00005 ABC transporter XI92_21190 PF00950 ABC 3 transport family XI92_21195 PF01475 Ferric uptake regulator family XI92_21200 PF04551 GcpE protein XI92_21210 PF06691 Protein of unknown function (DUF1189) XI92_21220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XI92_21220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XI92_21225 PF07690 Major Facilitator Superfamily XI92_21235 PF12849 PBP superfamily domain XI92_21240 PF00528 Binding-protein-dependent transport system inner membrane component XI92_21245 PF00528 Binding-protein-dependent transport system inner membrane component XI92_21250 PF00005 ABC transporter XI92_21255 PF01895 PhoU domain XI92_21260 PF00483 Nucleotidyl transferase XI92_21265 PF00471 Ribosomal protein L33 XI92_21270 PF01812 5-formyltetrahydrofolate cyclo-ligase family XI92_21275 PF06014 Bacterial protein of unknown function (DUF910) XI92_21280 PF00480 ROK family XI92_21285 PF10958 Protein of unknown function (DUF2759) XI92_21290 PF00753 Metallo-beta-lactamase superfamily XI92_21300 PF01022 Bacterial regulatory protein, arsR family XI92_21310 PF01053 Cys/Met metabolism PLP-dependent enzyme XI92_21315 PF01053 Cys/Met metabolism PLP-dependent enzyme XI92_21325 PF02219 Methylenetetrahydrofolate reductase XI92_21325 PF02574 Homocysteine S-methyltransferase XI92_21330 PF02965 Vitamin B12 dependent methionine synthase, activation domain XI92_21330 PF02310 B12 binding domain XI92_21330 PF02607 B12 binding domain XI92_21330 PF02574 Homocysteine S-methyltransferase XI92_21330 PF00809 Pterin binding enzyme XI92_21335 PF03033 Glycosyltransferase family 28 N-terminal domain XI92_21335 PF04101 Glycosyltransferase family 28 C-terminal domain XI92_21370 PF00375 Sodium:dicarboxylate symporter family XI92_21375 PF11117 Protein of unknown function (DUF2626) XI92_21385 PF00437 Type II/IV secretion system protein XI92_21390 PF00482 Type II secretion system (T2SS), protein F XI92_21425 PF01202 Shikimate kinase XI92_21430 PF14038 YqzE-like protein XI92_21450 PF11079 Bacterial protein YqhG of unknown function XI92_21455 PF00271 Helicase conserved C-terminal domain XI92_21455 PF00176 SNF2 family N-terminal domain XI92_21460 PF01571 Aminomethyltransferase folate-binding domain XI92_21460 PF08669 Glycine cleavage T-protein C-terminal barrel domain XI92_21465 PF02347 Glycine cleavage system P-protein XI92_21470 PF02347 Glycine cleavage system P-protein XI92_21485 PF00392 Bacterial regulatory proteins, gntR family XI92_21490 PF00005 ABC transporter XI92_21525 PF00893 Small Multidrug Resistance protein XI92_21530 PF00893 Small Multidrug Resistance protein XI92_21540 PF00356 Bacterial regulatory proteins, lacI family XI92_21540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XI92_21550 PF00581 Rhodanese-like domain XI92_21555 PF03099 Biotin/lipoate A/B protein ligase family XI92_21580 PF01325 Iron dependent repressor, N-terminal DNA binding domain XI92_21580 PF02742 Iron dependent repressor, metal binding and dimerisation domain XI92_21585 PF13419 Haloacid dehalogenase-like hydrolase XI92_21595 PF07136 Protein of unknown function (DUF1385) XI92_21600 PF11085 Conserved membrane protein YqhR XI92_21605 PF01220 Dehydroquinase class II XI92_21610 PF00557 Metallopeptidase family M24 XI92_21610 PF01321 Creatinase/Prolidase N-terminal domain XI92_21615 PF09285 Elongation factor P, C-terminal XI92_21615 PF01132 Elongation factor P (EF-P) OB domain XI92_21615 PF08207 Elongation factor P (EF-P) KOW-like domain XI92_21640 PF09548 Stage III sporulation protein AB (spore_III_AB) XI92_21645 PF06686 Stage III sporulation protein AC/AD protein family XI92_21650 PF06686 Stage III sporulation protein AC/AD protein family XI92_21655 PF09546 Stage III sporulation protein AE (spore_III_AE) XI92_21660 PF09581 Stage III sporulation protein AF (Spore_III_AF) XI92_21670 PF12685 SpoIIIAH-like protein XI92_21680 PF00364 Biotin-requiring enzyme XI92_21685 PF00289 Biotin carboxylase, N-terminal domain XI92_21685 PF02785 Biotin carboxylase C-terminal domain XI92_21685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XI92_21690 PF03780 Asp23 family, cell envelope-related function XI92_21695 PF01029 NusB family XI92_21700 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XI92_21700 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XI92_21710 PF02609 Exonuclease VII small subunit XI92_21715 PF00348 Polyprenyl synthetase XI92_21720 PF02779 Transketolase, pyrimidine binding domain XI92_21720 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XI92_21720 PF02780 Transketolase, C-terminal domain XI92_21725 PF01479 S4 domain XI92_21725 PF01728 FtsJ-like methyltransferase XI92_21730 PF02863 Arginine repressor, C-terminal domain XI92_21730 PF01316 Arginine repressor, DNA binding domain XI92_21735 PF13476 AAA domain XI92_21740 PF17820 PDZ domain XI92_21740 PF05580 SpoIVB peptidase S55 XI92_21750 PF00072 Response regulator receiver domain XI92_21750 PF08769 Sporulation initiation factor Spo0A C terminal XI92_21760 PF14174 YycC-like protein XI92_21765 PF03009 Glycerophosphoryl diester phosphodiesterase family XI92_21775 PF02954 Bacterial regulatory protein, Fis family XI92_21775 PF00158 Sigma-54 interaction domain XI92_21775 PF00989 PAS fold XI92_21785 PF01515 Phosphate acetyl/butaryl transferase XI92_21790 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XI92_21790 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XI92_21795 PF00871 Acetokinase family XI92_21800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XI92_21800 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_21805 PF00676 Dehydrogenase E1 component XI92_21810 PF02780 Transketolase, C-terminal domain XI92_21810 PF02779 Transketolase, pyrimidine binding domain XI92_21815 PF02817 e3 binding domain XI92_21815 PF00364 Biotin-requiring enzyme XI92_21815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XI92_21825 PF01098 Cell cycle protein XI92_21830 PF04239 Protein of unknown function (DUF421) XI92_21835 PF09297 NADH pyrophosphatase zinc ribbon domain XI92_21835 PF00293 NUDIX domain XI92_21840 PF11208 Protein of unknown function (DUF2992) XI92_21845 PF06491 Disulphide isomerase XI92_21850 PF00497 Bacterial extracellular solute-binding proteins, family 3 XI92_21855 PF00528 Binding-protein-dependent transport system inner membrane component XI92_21860 PF00005 ABC transporter XI92_21865 PF11728 Putative aromatic acid exporter C-terminal domain XI92_21865 PF06081 Aromatic acid exporter family member 1 XI92_21870 PF03734 L,D-transpeptidase catalytic domain XI92_21885 PF13302 Acetyltransferase (GNAT) domain XI92_21890 PF01546 Peptidase family M20/M25/M40 XI92_21890 PF07687 Peptidase dimerisation domain XI92_21895 PF00817 impB/mucB/samB family XI92_21895 PF11799 impB/mucB/samB family C-terminal domain XI92_21895 PF11798 IMS family HHH motif XI92_21900 PF02308 MgtC family XI92_21905 PF00690 Cation transporter/ATPase, N-terminus XI92_21905 PF00689 Cation transporting ATPase, C-terminus XI92_21925 PF12706 Beta-lactamase superfamily domain XI92_21925 PF00753 Metallo-beta-lactamase superfamily XI92_21935 PF01842 ACT domain XI92_21935 PF03315 Serine dehydratase beta chain XI92_21940 PF03313 Serine dehydratase alpha chain XI92_21945 PF03807 NADP oxidoreductase coenzyme F420-dependent XI92_21945 PF14748 Pyrroline-5-carboxylate reductase dimerisation XI92_21950 PF00753 Metallo-beta-lactamase superfamily XI92_21955 PF00106 short chain dehydrogenase XI92_21965 PF02774 Semialdehyde dehydrogenase, dimerisation domain XI92_21965 PF01118 Semialdehyde dehydrogenase, NAD binding domain XI92_21970 PF01960 ArgJ family XI92_21975 PF00696 Amino acid kinase family XI92_21980 PF00202 Aminotransferase class-III XI92_21985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XI92_21985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XI92_22000 PF01037 Lrp/AsnC ligand binding domain XI92_22000 PF13404 AsnC-type helix-turn-helix domain XI92_22010 PF02872 5'-nucleotidase, C-terminal domain XI92_22010 PF00149 Calcineurin-like phosphoesterase XI92_22025 PF00202 Aminotransferase class-III XI92_22035 PF00155 Aminotransferase class I and II XI92_22040 PF08241 Methyltransferase domain XI92_22040 PF12697 Alpha/beta hydrolase family XI92_22045 PF13847 Methyltransferase domain XI92_22050 PF06968 Biotin and Thiamin Synthesis associated domain XI92_22050 PF04055 Radical SAM superfamily XI92_22060 PF00885 6,7-dimethyl-8-ribityllumazine synthase XI92_22065 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XI92_22065 PF00925 GTP cyclohydrolase II XI92_22070 PF00677 Lumazine binding domain XI92_22075 PF01872 RibD C-terminal domain XI92_22075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XI92_22085 PF10827 Protein of unknown function (DUF2552) XI92_22090 PF12146 Serine aminopeptidase, S33 XI92_22095 PF00583 Acetyltransferase (GNAT) family XI92_22100 PF00356 Bacterial regulatory proteins, lacI family XI92_22105 PF03553 Na+/H+ antiporter family XI92_22105 PF13726 Na+-H+ antiporter family XI92_22110 PF12146 Serine aminopeptidase, S33 XI92_22120 PF00565 Staphylococcal nuclease homologue XI92_22120 PF00746 LPXTG cell wall anchor motif XI92_22120 PF02872 5'-nucleotidase, C-terminal domain XI92_22120 PF00149 Calcineurin-like phosphoesterase XI92_22130 PF04229 GrpB protein XI92_22130 PF13673 Acetyltransferase (GNAT) domain XI92_22135 PF00248 Aldo/keto reductase family XI92_22140 PF00248 Aldo/keto reductase family XI92_22145 PF13072 Mother cell inhibitor of FtsZ XI92_22150 PF00293 NUDIX domain XI92_22160 PF01944 Stage II sporulation protein M XI92_22165 PF01475 Ferric uptake regulator family XI92_22170 PF14004 Protein of unknown function (DUF4227) XI92_22175 PF00589 Phage integrase family XI92_22175 PF02899 Phage integrase, N-terminal SAM-like domain XI92_22180 PF13115 YtkA-like XI92_22185 PF01676 Metalloenzyme superfamily XI92_22190 PF01048 Phosphorylase superfamily XI92_22195 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain XI92_22195 PF02885 Glycosyl transferase family, helical bundle domain XI92_22195 PF00591 Glycosyl transferase family, a/b domain XI92_22200 PF01544 CorA-like Mg2+ transporter protein XI92_22205 PF00860 Permease family XI92_22215 PF01047 MarR family XI92_22230 PF00005 ABC transporter XI92_22235 PF00392 Bacterial regulatory proteins, gntR family XI92_22240 PF07943 Penicillin-binding protein 5, C-terminal domain XI92_22240 PF00768 D-alanyl-D-alanine carboxypeptidase XI92_22245 PF01740 STAS domain XI92_22255 PF04542 Sigma-70 region 2 XI92_22255 PF04539 Sigma-70 region 3 XI92_22255 PF04545 Sigma-70, region 4 XI92_22270 PF12164 Stage V sporulation protein AA XI92_22275 PF13782 Stage V sporulation protein AB XI92_22280 PF03862 SpoVAC/SpoVAEB sporulation membrane protein XI92_22285 PF07451 Stage V sporulation protein AD (SpoVAD) XI92_22290 PF03862 SpoVAC/SpoVAEB sporulation membrane protein XI92_22295 PF14097 Stage V sporulation protein AE1 XI92_22300 PF03323 Bacillus/Clostridium GerA spore germination protein XI92_22310 PF06207 Protein of unknown function (DUF1002) XI92_22320 PF00583 Acetyltransferase (GNAT) family XI92_22325 PF03745 Domain of unknown function (DUF309) XI92_22335 PF02616 Segregation and condensation protein ScpA XI92_22345 PF04079 Segregation and condensation complex subunit ScpB XI92_22355 PF01979 Amidohydrolase family XI92_22360 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XI92_22375 PF00874 PRD domain XI92_22375 PF03123 CAT RNA binding domain XI92_22380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XI92_22380 PF00367 phosphotransferase system, EIIB XI92_22380 PF02378 Phosphotransferase system, EIIC XI92_22385 PF00381 PTS HPr component phosphorylation site XI92_22390 PF02896 PEP-utilising enzyme, TIM barrel domain XI92_22390 PF00391 PEP-utilising enzyme, mobile domain XI92_22390 PF05524 PEP-utilising enzyme, N-terminal XI92_22405 PF00881 Nitroreductase family XI92_22410 PF00990 Diguanylate cyclase, GGDEF domain XI92_22415 PF00144 Beta-lactamase XI92_22420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XI92_22420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XI92_22435 PF03079 ARD/ARD' family XI92_22440 PF00596 Class II Aldolase and Adducin N-terminal domain XI92_22450 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain XI92_22450 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain XI92_22455 PF00155 Aminotransferase class I and II XI92_22460 PF00795 Carbon-nitrogen hydrolase XI92_22465 PF01636 Phosphotransferase enzyme family XI92_22490 PF01022 Bacterial regulatory protein, arsR family XI92_22495 PF00171 Aldehyde dehydrogenase family XI92_22500 PF01022 Bacterial regulatory protein, arsR family XI92_22520 PF02899 Phage integrase, N-terminal SAM-like domain XI92_22520 PF00589 Phage integrase family XI92_22545 PF03551 Transcriptional regulator PadR-like family XI92_22575 PF00293 NUDIX domain XI92_22580 PF02803 Thiolase, C-terminal domain XI92_22580 PF00108 Thiolase, N-terminal domain XI92_22615 PF00005 ABC transporter XI92_22615 PF17912 MalK OB fold domain XI92_22615 PF03459 TOBE domain XI92_22620 PF16657 Maltogenic Amylase, C-terminal domain XI92_22620 PF00128 Alpha amylase, catalytic domain XI92_22625 PF16657 Maltogenic Amylase, C-terminal domain XI92_22625 PF02903 Alpha amylase, N-terminal ig-like domain XI92_22625 PF00128 Alpha amylase, catalytic domain XI92_22630 PF13416 Bacterial extracellular solute-binding protein XI92_22635 PF00528 Binding-protein-dependent transport system inner membrane component XI92_22640 PF00528 Binding-protein-dependent transport system inner membrane component XI92_22645 PF00356 Bacterial regulatory proteins, lacI family XI92_22645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XI92_22650 PF00155 Aminotransferase class I and II XI92_22660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_22660 PF00512 His Kinase A (phospho-acceptor) domain XI92_22670 PF14040 Deoxyribonuclease NucA/NucB XI92_22680 PF08267 Cobalamin-independent synthase, N-terminal domain XI92_22680 PF01717 Cobalamin-independent synthase, Catalytic domain XI92_22695 PF07690 Major Facilitator Superfamily XI92_22720 PF14177 YkyB-like protein XI92_22725 PF02541 Ppx/GppA phosphatase family XI92_22730 PF13089 Polyphosphate kinase N-terminal domain XI92_22730 PF17941 Polyphosphate kinase C-terminal domain 1 XI92_22730 PF13090 Polyphosphate kinase C-terminal domain 2 XI92_22730 PF02503 Polyphosphate kinase middle domain XI92_22740 PF10518 TAT (twin-arginine translocation) pathway signal sequence XI92_22740 PF00149 Calcineurin-like phosphoesterase XI92_22750 PF10388 EAL-domain associated signalling protein domain XI92_22750 PF00563 EAL domain XI92_22765 PF08796 Protein of unknown function (DUF1797) XI92_22775 PF04308 Ribonuclease H-like XI92_22790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_22790 PF03466 LysR substrate binding domain XI92_22795 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal XI92_22795 PF00132 Bacterial transferase hexapeptide (six repeats) XI92_22795 PF14602 Hexapeptide repeat of succinyl-transferase XI92_22800 PF07687 Peptidase dimerisation domain XI92_22800 PF01546 Peptidase family M20/M25/M40 XI92_22810 PF02254 TrkA-N domain XI92_22810 PF02080 TrkA-C domain XI92_22815 PF17770 Ribonuclease J C-terminal domain XI92_22815 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain XI92_22815 PF00753 Metallo-beta-lactamase superfamily XI92_22830 PF01327 Polypeptide deformylase XI92_22840 PF00676 Dehydrogenase E1 component XI92_22845 PF02780 Transketolase, C-terminal domain XI92_22845 PF02779 Transketolase, pyrimidine binding domain XI92_22850 PF02817 e3 binding domain XI92_22850 PF00364 Biotin-requiring enzyme XI92_22850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XI92_22855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XI92_22855 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_22890 PF01276 Orn/Lys/Arg decarboxylase, major domain XI92_22890 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain XI92_22895 PF05256 Uncharacterised protein family (UPF0223) XI92_22900 PF06335 Protein of unknown function (DUF1054) XI92_22910 PF00459 Inositol monophosphatase family XI92_22925 PF14036 YlaH-like protein XI92_22935 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) XI92_22945 PF13638 PIN domain XI92_22945 PF02562 PhoH-like protein XI92_22955 PF07408 Protein of unknown function (DUF1507) XI92_22960 PF01098 Cell cycle protein XI92_22965 PF02785 Biotin carboxylase C-terminal domain XI92_22965 PF00289 Biotin carboxylase, N-terminal domain XI92_22965 PF00364 Biotin-requiring enzyme XI92_22965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XI92_22965 PF00682 HMGL-like XI92_22965 PF02436 Conserved carboxylase domain XI92_22970 PF02628 Cytochrome oxidase assembly protein XI92_22975 PF01040 UbiA prenyltransferase family XI92_22980 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XI92_22980 PF00034 Cytochrome c XI92_22980 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XI92_22985 PF00115 Cytochrome C and Quinol oxidase polypeptide I XI92_22990 PF00510 Cytochrome c oxidase subunit III XI92_22995 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XI92_23000 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) XI92_23005 PF00795 Carbon-nitrogen hydrolase XI92_23010 PF08868 YugN-like family XI92_23015 PF00188 Cysteine-rich secretory protein family XI92_23015 PF14504 CAP-associated N-terminal XI92_23020 PF14071 Putative coat protein XI92_23025 PF14003 YlbE-like protein XI92_23030 PF00300 Histidine phosphatase superfamily (branch 1) XI92_23035 PF06133 Control of competence regulator ComK, YlbF/YmcA XI92_23040 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) XI92_23055 PF01467 Cytidylyltransferase-like XI92_23060 PF07670 Nucleoside recognition XI92_23065 PF01734 Patatin-like phospholipase XI92_23070 PF05362 Lon protease (S16) C-terminal proteolytic domain XI92_23070 PF13180 PDZ domain XI92_23075 PF05636 HIGH Nucleotidyl Transferase XI92_23080 PF02620 Large ribosomal RNA subunit accumulation protein YceD XI92_23085 PF01783 Ribosomal L32p protein family XI92_23095 PF00583 Acetyltransferase (GNAT) family XI92_23100 PF02558 Ketopantoate reductase PanE/ApbA XI92_23100 PF08546 Ketopantoate reductase PanE/ApbA C terminal XI92_23105 PF10079 Bacillithiol biosynthesis BshC XI92_23110 PF01795 MraW methylase family XI92_23115 PF04977 Septum formation initiator XI92_23125 PF03717 Penicillin-binding Protein dimerisation domain XI92_23125 PF00905 Penicillin binding protein transpeptidase domain XI92_23125 PF03793 PASTA domain XI92_23130 PF08245 Mur ligase middle domain XI92_23130 PF02875 Mur ligase family, glutamate ligase domain XI92_23130 PF01225 Mur ligase family, catalytic domain XI92_23135 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 XI92_23135 PF00953 Glycosyl transferase family 4 XI92_23140 PF08245 Mur ligase middle domain XI92_23140 PF02875 Mur ligase family, glutamate ligase domain XI92_23145 PF01098 Cell cycle protein XI92_23150 PF03033 Glycosyltransferase family 28 N-terminal domain XI92_23150 PF04101 Glycosyltransferase family 28 C-terminal domain XI92_23155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XI92_23155 PF01565 FAD binding domain XI92_23160 PF03799 Cell division protein FtsQ XI92_23160 PF08478 POTRA domain, FtsQ-type XI92_23165 PF02491 SHS2 domain inserted in FTSA XI92_23170 PF00091 Tubulin/FtsZ family, GTPase domain XI92_23170 PF12327 FtsZ family, C-terminal domain XI92_23175 PF03419 Sporulation factor SpoIIGA XI92_23180 PF04542 Sigma-70 region 2 XI92_23180 PF04545 Sigma-70, region 4 XI92_23185 PF04542 Sigma-70 region 2 XI92_23185 PF04545 Sigma-70, region 4 XI92_23185 PF04539 Sigma-70 region 3 XI92_23190 PF05239 PRC-barrel domain XI92_23200 PF01168 Alanine racemase, N-terminal domain XI92_23205 PF04472 Cell division protein SepF XI92_23210 PF02325 YGGT family XI92_23215 PF01479 S4 domain XI92_23215 PF17774 Putative RNA-binding domain in YlmH XI92_23220 PF05103 DivIVA protein XI92_23225 PF08264 Anticodon-binding domain of tRNA XI92_23225 PF00133 tRNA synthetases class I (I, L, M and V) XI92_23225 PF06827 Zinc finger found in FPG and IleRS XI92_23235 PF01252 Signal peptidase (SPase) II XI92_23240 PF00849 RNA pseudouridylate synthase XI92_23240 PF01479 S4 domain XI92_23245 PF00156 Phosphoribosyl transferase domain XI92_23250 PF00860 Permease family XI92_23255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XI92_23255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XI92_23260 PF01979 Amidohydrolase family XI92_23265 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XI92_23265 PF00117 Glutamine amidotransferase class-I XI92_23270 PF02142 MGS-like domain XI92_23270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XI92_23270 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XI92_23275 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B XI92_23280 PF01180 Dihydroorotate dehydrogenase XI92_23285 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XI92_23290 PF00156 Phosphoribosyl transferase domain XI92_23325 PF00689 Cation transporting ATPase, C-terminus XI92_23325 PF00690 Cation transporter/ATPase, N-terminus XI92_23330 PF08340 Domain of unknown function (DUF1732) XI92_23330 PF03755 YicC-like family, N-terminal region XI92_23335 PF04025 Domain of unknown function (DUF370) XI92_23340 PF00625 Guanylate kinase XI92_23345 PF01192 RNA polymerase Rpb6 XI92_23350 PF02441 Flavoprotein XI92_23350 PF04127 DNA / pantothenate metabolism flavoprotein XI92_23355 PF00271 Helicase conserved C-terminal domain XI92_23355 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XI92_23355 PF04851 Type III restriction enzyme, res subunit XI92_23355 PF17764 3′ DNA-binding domain (3′BD) XI92_23355 PF18074 Primosomal protein N C-terminal domain XI92_23360 PF01327 Polypeptide deformylase XI92_23365 PF02911 Formyl transferase, C-terminal domain XI92_23365 PF00551 Formyl transferase XI92_23370 PF01029 NusB family XI92_23370 PF01189 16S rRNA methyltransferase RsmB/F XI92_23375 PF04055 Radical SAM superfamily XI92_23385 PF03793 PASTA domain XI92_23385 PF00069 Protein kinase domain XI92_23390 PF16745 RsgA N-terminal domain XI92_23390 PF03193 RsgA GTPase XI92_23395 PF00834 Ribulose-phosphate 3 epimerase family XI92_23400 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain XI92_23400 PF04263 Thiamin pyrophosphokinase, catalytic domain XI92_23405 PF08183 Stage V sporulation protein family XI92_23410 PF00830 Ribosomal L28 family XI92_23415 PF03780 Asp23 family, cell envelope-related function XI92_23420 PF13684 Dihydroxyacetone kinase family XI92_23420 PF02734 DAK2 domain XI92_23425 PF00270 DEAD/DEAH box helicase XI92_23425 PF00271 Helicase conserved C-terminal domain XI92_23425 PF17191 RecG wedge domain XI92_23430 PF03061 Thioesterase superfamily XI92_23435 PF02504 Fatty acid synthesis protein XI92_23440 PF00698 Acyl transferase domain XI92_23450 PF00550 Phosphopantetheine attachment site XI92_23455 PF14622 Ribonuclease-III-like XI92_23455 PF00035 Double-stranded RNA binding motif XI92_23460 PF02463 RecF/RecN/SMC N terminal domain XI92_23460 PF06470 SMC proteins Flexible Hinge Domain XI92_23465 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_23470 PF02463 RecF/RecN/SMC N terminal domain XI92_23470 PF06470 SMC proteins Flexible Hinge Domain XI92_23475 PF00448 SRP54-type protein, GTPase domain XI92_23475 PF02881 SRP54-type protein, helical bundle domain XI92_23480 PF04297 Putative helix-turn-helix protein, YlxM / p13 like XI92_23485 PF02978 Signal peptide binding domain XI92_23485 PF00448 SRP54-type protein, GTPase domain XI92_23485 PF02881 SRP54-type protein, helical bundle domain XI92_23490 PF00886 Ribosomal protein S16 XI92_23500 PF05239 PRC-barrel domain XI92_23500 PF01782 RimM N-terminal domain XI92_23505 PF01746 tRNA (Guanine-1)-methyltransferase XI92_23510 PF01245 Ribosomal protein L19 XI92_23515 PF10502 Signal peptidase, peptidase S26 XI92_23520 PF01926 50S ribosome-binding GTPase XI92_23525 PF01351 Ribonuclease HII XI92_23530 PF08442 ATP-grasp domain XI92_23530 PF00549 CoA-ligase XI92_23535 PF00549 CoA-ligase XI92_23535 PF02629 CoA binding domain XI92_23540 PF02481 DNA recombination-mediator protein A XI92_23545 PF01131 DNA topoisomerase XI92_23545 PF01396 Topoisomerase DNA binding C4 zinc finger XI92_23545 PF01751 Toprim domain XI92_23550 PF01134 Glucose inhibited division protein A XI92_23555 PF02899 Phage integrase, N-terminal SAM-like domain XI92_23555 PF00589 Phage integrase family XI92_23560 PF00227 Proteasome subunit XI92_23565 PF10431 C-terminal, D2-small domain, of ClpB protein XI92_23565 PF07724 AAA domain (Cdc48 subfamily) XI92_23565 PF00004 ATPase family associated with various cellular activities (AAA) XI92_23570 PF06018 CodY GAF-like domain XI92_23570 PF08222 CodY helix-turn-helix domain XI92_23575 PF00318 Ribosomal protein S2 XI92_23580 PF00889 Elongation factor TS XI92_23585 PF00696 Amino acid kinase family XI92_23590 PF01765 Ribosome recycling factor XI92_23595 PF01255 Putative undecaprenyl diphosphate synthase XI92_23605 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XI92_23605 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XI92_23605 PF13288 DXP reductoisomerase C-terminal domain XI92_23610 PF17820 PDZ domain XI92_23610 PF02163 Peptidase family M50 XI92_23615 PF04073 Aminoacyl-tRNA editing domain XI92_23615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XI92_23615 PF03129 Anticodon binding domain XI92_23620 PF00929 Exonuclease XI92_23620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XI92_23620 PF07733 Bacterial DNA polymerase III alpha NTPase domain XI92_23620 PF14480 DNA polymerase III polC-type N-terminus I XI92_23620 PF14579 Helix-hairpin-helix motif XI92_23620 PF11490 DNA polymerase III polC-type N-terminus II XI92_23620 PF02811 PHP domain XI92_23625 PF17384 RimP C-terminal SH3 domain XI92_23625 PF02576 RimP N-terminal domain XI92_23630 PF13184 NusA-like KH domain XI92_23630 PF08529 NusA N-terminal domain XI92_23630 PF00575 S1 RNA binding domain XI92_23635 PF04296 Protein of unknown function (DUF448) XI92_23640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family XI92_23645 PF00009 Elongation factor Tu GTP binding domain XI92_23645 PF11987 Translation-initiation factor 2 XI92_23645 PF04760 Translation initiation factor IF-2, N-terminal region XI92_23650 PF04456 Protein of unknown function (DUF503) XI92_23655 PF02033 Ribosome-binding factor A XI92_23660 PF16198 tRNA pseudouridylate synthase B C-terminal domain XI92_23660 PF01509 TruB family pseudouridylate synthase (N terminal domain) XI92_23665 PF01687 Riboflavin kinase XI92_23665 PF06574 FAD synthetase XI92_23670 PF00312 Ribosomal protein S15 XI92_23675 PF01138 3' exoribonuclease family, domain 1 XI92_23675 PF03725 3' exoribonuclease family, domain 2 XI92_23675 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XI92_23675 PF00575 S1 RNA binding domain XI92_23675 PF00013 KH domain XI92_23680 PF01522 Polysaccharide deacetylase XI92_23685 PF05193 Peptidase M16 inactive domain XI92_23685 PF00675 Insulinase (Peptidase family M16) XI92_23690 PF05239 PRC-barrel domain XI92_23695 PF16924 Dipicolinate synthase subunit A N-terminal domain XI92_23695 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XI92_23700 PF02441 Flavoprotein XI92_23705 PF01118 Semialdehyde dehydrogenase, NAD binding domain XI92_23705 PF02774 Semialdehyde dehydrogenase, dimerisation domain XI92_23710 PF00696 Amino acid kinase family XI92_23710 PF13840 ACT domain XI92_23715 PF00701 Dihydrodipicolinate synthetase family XI92_23725 PF00753 Metallo-beta-lactamase superfamily XI92_23725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain XI92_23725 PF17770 Ribonuclease J C-terminal domain XI92_23730 PF00574 Clp protease XI92_23735 PF14035 YlzJ-like protein XI92_23740 PF17854 FtsK alpha domain XI92_23740 PF09397 Ftsk gamma domain XI92_23740 PF01580 FtsK/SpoIIIE family XI92_23745 PF07702 UTRA domain XI92_23745 PF00392 Bacterial regulatory proteins, gntR family XI92_23770 PF05193 Peptidase M16 inactive domain XI92_23775 PF00675 Insulinase (Peptidase family M16) XI92_23775 PF05193 Peptidase M16 inactive domain XI92_23785 PF11588 Protein of unknown function (DUF3243) XI92_23790 PF11868 Protein of unknown function (DUF3388) XI92_23800 PF01066 CDP-alcohol phosphatidyltransferase XI92_23805 PF18146 Damage-inducible protein CinA KH domain XI92_23805 PF02464 Competence-damaged protein XI92_23805 PF00994 Probable molybdopterin binding domain XI92_23810 PF00154 recA bacterial DNA recombination protein XI92_23815 PF00013 KH domain XI92_23815 PF01966 HD domain XI92_23815 PF12072 Domain of unknown function (DUF3552) XI92_23820 PF13277 YmdB-like protein XI92_23825 PF04232 Stage V sporulation protein S (SpoVS) XI92_23830 PF01244 Membrane dipeptidase (Peptidase family M19) XI92_23835 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II XI92_23835 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase XI92_23835 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg XI92_23840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XI92_23845 PF04055 Radical SAM superfamily XI92_23845 PF00919 Uncharacterized protein family UPF0004 XI92_23845 PF01938 TRAM domain XI92_23850 PF06133 Control of competence regulator ComK, YlbF/YmcA XI92_23855 PF10628 Outer spore coat protein E (CotE) XI92_23860 PF00488 MutS domain V XI92_23860 PF05192 MutS domain III XI92_23860 PF01624 MutS domain I XI92_23860 PF05188 MutS domain II XI92_23860 PF05190 MutS family domain IV XI92_23865 PF01119 DNA mismatch repair protein, C-terminal domain XI92_23865 PF08676 MutL C terminal dimerisation domain XI92_23875 PF00350 Dynamin family XI92_23880 PF00884 Sulfatase XI92_23890 PF07486 Cell Wall Hydrolase XI92_23895 PF00082 Subtilase family XI92_23900 PF00388 Phosphatidylinositol-specific phospholipase C, X domain XI92_23905 PF00232 Glycosyl hydrolase family 1 XI92_23910 PF07702 UTRA domain XI92_23910 PF00392 Bacterial regulatory proteins, gntR family XI92_23920 PF00392 Bacterial regulatory proteins, gntR family XI92_23920 PF00155 Aminotransferase class I and II XI92_23925 PF03788 LrgA family XI92_23930 PF04172 LrgB-like family XI92_23935 PF10787 Uncharacterised protein from bacillus cereus group XI92_23950 PF08485 Polysaccharide biosynthesis protein C-terminal XI92_23950 PF02719 Polysaccharide biosynthesis protein XI92_23965 PF03033 Glycosyltransferase family 28 N-terminal domain XI92_23965 PF04101 Glycosyltransferase family 28 C-terminal domain XI92_23970 PF00990 Diguanylate cyclase, GGDEF domain XI92_23970 PF00563 EAL domain XI92_23970 PF03707 Bacterial signalling protein N terminal repeat XI92_23975 PF00561 alpha/beta hydrolase fold XI92_23990 PF01546 Peptidase family M20/M25/M40 XI92_23990 PF07687 Peptidase dimerisation domain XI92_23995 PF00730 HhH-GPD superfamily base excision DNA repair protein XI92_23995 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain XI92_24000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XI92_24000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XI92_24005 PF12833 Helix-turn-helix domain XI92_24005 PF02805 Metal binding domain of Ada XI92_24010 PF01497 Periplasmic binding protein XI92_24015 PF01032 FecCD transport family XI92_24020 PF01032 FecCD transport family XI92_24025 PF00005 ABC transporter XI92_24030 PF00756 Putative esterase XI92_24040 PF02583 Metal-sensitive transcriptional repressor XI92_24045 PF00403 Heavy-metal-associated domain XI92_24050 PF00403 Heavy-metal-associated domain XI92_24060 PF00216 Bacterial DNA-binding protein XI92_24065 PF01226 Formate/nitrite transporter XI92_24070 PF10518 TAT (twin-arginine translocation) pathway signal sequence XI92_24070 PF00149 Calcineurin-like phosphoesterase XI92_24075 PF00704 Glycosyl hydrolases family 18 XI92_24075 PF00041 Fibronectin type III domain XI92_24080 PF00324 Amino acid permease XI92_24095 PF04238 Protein of unknown function (DUF420) XI92_24100 PF00465 Iron-containing alcohol dehydrogenase XI92_24105 PF00455 DeoR C terminal sensor domain XI92_24105 PF08220 DeoR-like helix-turn-helix domain XI92_24110 PF00294 pfkB family carbohydrate kinase XI92_24115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XI92_24115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XI92_24120 PF06725 3D domain XI92_24120 PF01476 LysM domain XI92_24135 PF17209 Hfq protein XI92_24150 PF00004 ATPase family associated with various cellular activities (AAA) XI92_24150 PF17866 AAA lid domain XI92_24160 PF03458 UPF0126 domain XI92_24165 PF16360 GTP-binding GTPase Middle Region XI92_24165 PF01926 50S ribosome-binding GTPase XI92_24165 PF13167 GTP-binding GTPase N-terminal XI92_24170 PF06838 Methionine gamma-lyase XI92_24175 PF13411 MerR HTH family regulatory protein XI92_24180 PF00120 Glutamine synthetase, catalytic domain XI92_24180 PF03951 Glutamine synthetase, beta-Grasp domain XI92_24185 PF03551 Transcriptional regulator PadR-like family XI92_24200 PF01726 LexA DNA binding domain XI92_24200 PF00717 Peptidase S24-like XI92_24205 PF00239 Resolvase, N terminal domain XI92_24210 PF05979 Bacterial protein of unknown function (DUF896) XI92_24220 PF01609 Transposase DDE domain XI92_24225 PF00149 Calcineurin-like phosphoesterase XI92_24225 PF02872 5'-nucleotidase, C-terminal domain XI92_24230 PF00497 Bacterial extracellular solute-binding proteins, family 3 XI92_24235 PF00005 ABC transporter XI92_24240 PF00528 Binding-protein-dependent transport system inner membrane component XI92_24245 PF00528 Binding-protein-dependent transport system inner membrane component XI92_24250 PF02779 Transketolase, pyrimidine binding domain XI92_24250 PF02780 Transketolase, C-terminal domain XI92_24250 PF00456 Transketolase, thiamine diphosphate binding domain XI92_24255 PF10747 Sporulation inhibitor of replication protein SirA XI92_24260 PF03672 Uncharacterised protein family (UPF0154) XI92_24265 PF00005 ABC transporter XI92_24265 PF00664 ABC transporter transmembrane region XI92_24270 PF00664 ABC transporter transmembrane region XI92_24270 PF00005 ABC transporter XI92_24275 PF08239 Bacterial SH3 domain XI92_24275 PF01183 Glycosyl hydrolases family 25 XI92_24295 PF01925 Sulfite exporter TauE/SafE XI92_24305 PF00293 NUDIX domain XI92_24305 PF13344 Haloacid dehalogenase-like hydrolase XI92_24310 PF04172 LrgB-like family XI92_24315 PF03788 LrgA family XI92_24320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_24320 PF03466 LysR substrate binding domain XI92_24345 PF13276 HTH-like domain XI92_24345 PF00665 Integrase core domain XI92_24345 PF13333 Integrase core domain XI92_24365 PF02683 Cytochrome C biogenesis protein transmembrane region XI92_24370 PF07301 Protein of unknown function (DUF1453) XI92_24375 PF11084 Protein of unknown function (DUF2621) XI92_24400 PF01209 ubiE/COQ5 methyltransferase family XI92_24405 PF09021 HutP XI92_24410 PF00221 Aromatic amino acid lyase XI92_24415 PF17391 Urocanase N-terminal domain XI92_24415 PF17392 Urocanase C-terminal domain XI92_24415 PF01175 Urocanase Rossmann-like domain XI92_24420 PF01979 Amidohydrolase family XI92_24425 PF00491 Arginase family XI92_24430 PF02559 CarD-like/TRCF domain XI92_24440 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_24450 PF01645 Conserved region in glutamate synthase XI92_24465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_24470 PF01738 Dienelactone hydrolase family XI92_24475 PF13426 PAS domain XI92_24475 PF13188 PAS domain XI92_24475 PF00989 PAS fold XI92_24475 PF00512 His Kinase A (phospho-acceptor) domain XI92_24475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_24485 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_24485 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_24505 PF00547 Urease, gamma subunit XI92_24510 PF00699 Urease beta subunit XI92_24515 PF00449 Urease alpha-subunit, N-terminal domain XI92_24515 PF01979 Amidohydrolase family XI92_24520 PF05194 UreE urease accessory protein, C-terminal domain XI92_24520 PF02814 UreE urease accessory protein, N-terminal domain XI92_24525 PF01730 UreF XI92_24530 PF02492 CobW/HypB/UreG, nucleotide-binding domain XI92_24535 PF01774 UreD urease accessory protein XI92_24545 PF03824 High-affinity nickel-transport protein XI92_24550 PF05532 CsbD-like XI92_24570 PF01381 Helix-turn-helix XI92_24575 PF13193 AMP-binding enzyme C-terminal domain XI92_24575 PF00501 AMP-binding enzyme XI92_24580 PF02632 BioY family XI92_24585 PF13193 AMP-binding enzyme C-terminal domain XI92_24585 PF00501 AMP-binding enzyme XI92_24590 PF00108 Thiolase, N-terminal domain XI92_24590 PF02803 Thiolase, C-terminal domain XI92_24600 PF13344 Haloacid dehalogenase-like hydrolase XI92_24600 PF00293 NUDIX domain XI92_24605 PF01411 tRNA synthetases class II (A) XI92_24605 PF02272 DHHA1 domain XI92_24605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XI92_24615 PF07690 Major Facilitator Superfamily XI92_24625 PF08179 Small acid-soluble spore protein P family XI92_24635 PF01522 Polysaccharide deacetylase XI92_24645 PF00694 Aconitase C-terminal domain XI92_24645 PF00330 Aconitase family (aconitate hydratase) XI92_24650 PF00664 ABC transporter transmembrane region XI92_24650 PF00005 ABC transporter XI92_24670 PF02811 PHP domain XI92_24670 PF00929 Exonuclease XI92_24670 PF01336 OB-fold nucleic acid binding domain XI92_24670 PF14579 Helix-hairpin-helix motif XI92_24670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XI92_24670 PF07733 Bacterial DNA polymerase III alpha NTPase domain XI92_24670 PF11490 DNA polymerase III polC-type N-terminus II XI92_24675 PF13040 Fur-regulated basic protein B XI92_24680 PF08177 Small acid-soluble spore protein N family XI92_24690 PF01476 LysM domain XI92_24690 PF00704 Glycosyl hydrolases family 18 XI92_24695 PF01385 Probable transposase XI92_24695 PF12323 Helix-turn-helix domain XI92_24695 PF07282 Putative transposase DNA-binding domain XI92_24700 PF03061 Thioesterase superfamily XI92_24705 PF01521 Iron-sulphur cluster biosynthesis XI92_24710 PF02660 Glycerol-3-phosphate acyltransferase XI92_24715 PF03477 ATP cone domain XI92_24715 PF13597 Anaerobic ribonucleoside-triphosphate reductase XI92_24720 PF04055 Radical SAM superfamily XI92_24725 PF00072 Response regulator receiver domain XI92_24725 PF00486 Transcriptional regulatory protein, C terminal XI92_24730 PF13180 PDZ domain XI92_24735 PF13380 CoA binding domain XI92_24745 PF00204 DNA gyrase B XI92_24745 PF00986 DNA gyrase B subunit, carboxyl terminus XI92_24745 PF01751 Toprim domain XI92_24745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_24750 PF00521 DNA gyrase/topoisomerase IV, subunit A XI92_24750 PF03989 DNA gyrase C-terminal domain, beta-propeller XI92_24755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XI92_24755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XI92_24775 PF13732 Domain of unknown function (DUF4162) XI92_24775 PF00005 ABC transporter XI92_24785 PF04542 Sigma-70 region 2 XI92_24785 PF08281 Sigma-70, region 4 XI92_24795 PF03816 Cell envelope-related transcriptional attenuator domain XI92_24800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_24805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_24810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_24815 PF08241 Methyltransferase domain XI92_24850 PF13520 Amino acid permease XI92_24865 PF03323 Bacillus/Clostridium GerA spore germination protein XI92_24875 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XI92_24875 PF00384 Molybdopterin oxidoreductase XI92_24875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XI92_24875 PF00037 4Fe-4S binding domain XI92_24875 PF01568 Molydopterin dinucleotide binding domain XI92_24880 PF07849 Protein of unknown function (DUF1641) XI92_24885 PF10057 Uncharacterized conserved protein (DUF2294) XI92_24890 PF02634 FdhD/NarQ family XI92_24895 PF06463 Molybdenum Cofactor Synthesis C XI92_24895 PF04055 Radical SAM superfamily XI92_24900 PF01226 Formate/nitrite transporter XI92_24905 PF00899 ThiF family XI92_24910 PF03453 MoeA N-terminal region (domain I and II) XI92_24910 PF00994 Probable molybdopterin binding domain XI92_24910 PF03454 MoeA C-terminal region (domain IV) XI92_24915 PF02391 MoaE protein XI92_24925 PF10609 NUBPL iron-transfer P-loop NTPase XI92_24940 PF06961 Protein of unknown function (DUF1294) XI92_24945 PF00892 EamA-like transporter family XI92_24950 PF02681 Divergent PAP2 family XI92_24955 PF13243 Squalene-hopene cyclase C-terminal domain XI92_24955 PF13249 Squalene-hopene cyclase N-terminal domain XI92_24970 PF00171 Aldehyde dehydrogenase family XI92_24980 PF00474 Sodium:solute symporter family XI92_24985 PF01156 Inosine-uridine preferring nucleoside hydrolase XI92_24995 PF14698 Argininosuccinate lyase C-terminal XI92_24995 PF00206 Lyase XI92_25005 PF00106 short chain dehydrogenase XI92_25015 PF00132 Bacterial transferase hexapeptide (six repeats) XI92_25025 PF00293 NUDIX domain XI92_25040 PF00258 Flavodoxin XI92_25050 PF00313 'Cold-shock' DNA-binding domain XI92_25070 PF13039 Protein of unknown function (DUF3900) XI92_25070 PF13037 Domain of unknown function (DUF3898) XI92_25080 PF04294 VanW like protein XI92_25085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_25095 PF02308 MgtC family XI92_25100 PF08453 Peptidase family M9 N-terminal XI92_25100 PF01752 Collagenase XI92_25100 PF18496 Collagenase G catalytic helper subdomain XI92_25105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_25105 PF00989 PAS fold XI92_25105 PF00512 His Kinase A (phospho-acceptor) domain XI92_25140 PF01609 Transposase DDE domain XI92_25175 PF00082 Subtilase family XI92_25200 PF02743 Cache domain XI92_25200 PF00672 HAMP domain XI92_25200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_25210 PF18801 response regulator aspartate phosphatase H, N terminal XI92_25215 PF16363 GDP-mannose 4,6 dehydratase XI92_25220 PF01370 NAD dependent epimerase/dehydratase family XI92_25235 PF01695 IstB-like ATP binding protein XI92_25240 PF00665 Integrase core domain XI92_25255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_25260 PF01609 Transposase DDE domain XI92_25285 PF03323 Bacillus/Clostridium GerA spore germination protein XI92_25295 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading XI92_25295 PF18416 N-acetylglucosamine binding protein domain 2 XI92_25300 PF00388 Phosphatidylinositol-specific phospholipase C, X domain XI92_25310 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_25315 PF00581 Rhodanese-like domain XI92_25315 PF00753 Metallo-beta-lactamase superfamily XI92_25325 PF01066 CDP-alcohol phosphatidyltransferase XI92_25350 PF02913 FAD linked oxidases, C-terminal domain XI92_25350 PF01565 FAD binding domain XI92_25355 PF01758 Sodium Bile acid symporter family XI92_25365 PF18801 response regulator aspartate phosphatase H, N terminal XI92_25380 PF08240 Alcohol dehydrogenase GroES-like domain XI92_25380 PF00107 Zinc-binding dehydrogenase XI92_25385 PF01022 Bacterial regulatory protein, arsR family XI92_25395 PF01494 FAD binding domain XI92_25400 PF03009 Glycerophosphoryl diester phosphodiesterase family XI92_25410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_25410 PF03466 LysR substrate binding domain XI92_25425 PF00144 Beta-lactamase XI92_25430 PF04371 Porphyromonas-type peptidyl-arginine deiminase XI92_25435 PF06146 Phosphate-starvation-inducible E XI92_25450 PF04371 Porphyromonas-type peptidyl-arginine deiminase XI92_25455 PF08439 Oligopeptidase F XI92_25455 PF01432 Peptidase family M3 XI92_25460 PF00797 N-acetyltransferase XI92_25465 PF09154 Domain of unknown function (DUF1939) XI92_25465 PF00128 Alpha amylase, catalytic domain XI92_25470 PF01713 Smr domain XI92_25470 PF00488 MutS domain V XI92_25485 PF17827 PrmC N-terminal domain XI92_25485 PF05175 Methyltransferase small domain XI92_25490 PF00107 Zinc-binding dehydrogenase XI92_25490 PF08240 Alcohol dehydrogenase GroES-like domain XI92_25495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_25495 PF03466 LysR substrate binding domain XI92_25505 PF10901 Protein of unknown function (DUF2690) XI92_25510 PF13302 Acetyltransferase (GNAT) domain XI92_25525 PF13170 Protein of unknown function (DUF4003) XI92_25530 PF05675 Protein of unknown function (DUF817) XI92_25535 PF01032 FecCD transport family XI92_25540 PF01032 FecCD transport family XI92_25545 PF01497 Periplasmic binding protein XI92_25550 PF00583 Acetyltransferase (GNAT) family XI92_25560 PF03600 Citrate transporter XI92_25565 PF08830 Protein of unknown function (DUF1806) XI92_25570 PF02585 GlcNAc-PI de-N-acetylase XI92_25595 PF07690 Major Facilitator Superfamily XI92_25600 PF00324 Amino acid permease XI92_25605 PF00753 Metallo-beta-lactamase superfamily XI92_25650 PF00753 Metallo-beta-lactamase superfamily XI92_25655 PF03063 Prismane/CO dehydrogenase family XI92_25680 PF00005 ABC transporter XI92_25680 PF13732 Domain of unknown function (DUF4162) XI92_25685 PF01061 ABC-2 type transporter XI92_25705 PF00535 Glycosyl transferase family 2 XI92_25705 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 XI92_25710 PF04542 Sigma-70 region 2 XI92_25715 PF12791 Anti-sigma factor N-terminus XI92_25720 PF01522 Polysaccharide deacetylase XI92_25720 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain XI92_25725 PF01022 Bacterial regulatory protein, arsR family XI92_25735 PF01638 HxlR-like helix-turn-helix XI92_25740 PF02525 Flavodoxin-like fold XI92_25745 PF00501 AMP-binding enzyme XI92_25745 PF13193 AMP-binding enzyme C-terminal domain XI92_25750 PF13302 Acetyltransferase (GNAT) domain XI92_25765 PF02567 Phenazine biosynthesis-like protein XI92_25805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XI92_25805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XI92_25810 PF00392 Bacterial regulatory proteins, gntR family XI92_25810 PF07702 UTRA domain XI92_25815 PF03960 ArsC family XI92_25840 PF03928 Haem-degrading XI92_25850 PF01638 HxlR-like helix-turn-helix XI92_25855 PF00925 GTP cyclohydrolase II XI92_25860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XI92_25860 PF01872 RibD C-terminal domain XI92_25865 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) XI92_25870 PF00672 HAMP domain XI92_25870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_25870 PF12729 Four helix bundle sensory module for signal transduction XI92_25880 PF07504 Fungalysin/Thermolysin Propeptide Motif XI92_25880 PF01447 Thermolysin metallopeptidase, catalytic domain XI92_25880 PF03413 Peptidase propeptide and YPEB domain XI92_25880 PF02868 Thermolysin metallopeptidase, alpha-helical domain XI92_25885 PF00698 Acyl transferase domain XI92_25885 PF08240 Alcohol dehydrogenase GroES-like domain XI92_25885 PF00107 Zinc-binding dehydrogenase XI92_25885 PF16197 Ketoacyl-synthetase C-terminal extension XI92_25885 PF00109 Beta-ketoacyl synthase, N-terminal domain XI92_25885 PF02801 Beta-ketoacyl synthase, C-terminal domain XI92_25885 PF08659 KR domain XI92_25885 PF00550 Phosphopantetheine attachment site XI92_25885 PF14765 Polyketide synthase dehydratase XI92_25900 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XI92_25900 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XI92_25905 PF02780 Transketolase, C-terminal domain XI92_25905 PF02779 Transketolase, pyrimidine binding domain XI92_25905 PF00456 Transketolase, thiamine diphosphate binding domain XI92_25910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XI92_25910 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XI92_25915 PF00923 Transaldolase/Fructose-6-phosphate aldolase XI92_25920 PF02447 GntP family permease XI92_25925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XI92_25925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XI92_25930 PF10282 Lactonase, 7-bladed beta-propeller XI92_25935 PF06906 Protein of unknown function (DUF1272) XI92_25940 PF00805 Pentapeptide repeats (8 copies) XI92_25950 PF00892 EamA-like transporter family XI92_25965 PF01370 NAD dependent epimerase/dehydratase family XI92_25970 PF08484 C-methyltransferase C-terminal domain XI92_25970 PF08421 Putative zinc binding domain XI92_25975 PF16363 GDP-mannose 4,6 dehydratase XI92_25980 PF00483 Nucleotidyl transferase XI92_25990 PF13411 MerR HTH family regulatory protein XI92_25995 PF00571 CBS domain XI92_25995 PF01595 Cyclin M transmembrane N-terminal domain XI92_25995 PF03471 Transporter associated domain XI92_26005 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_26025 PF07690 Major Facilitator Superfamily XI92_26035 PF08003 Protein of unknown function (DUF1698) XI92_26060 PF01594 AI-2E family transporter XI92_26065 PF13288 DXP reductoisomerase C-terminal domain XI92_26065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XI92_26065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XI92_26070 PF00579 tRNA synthetases class I (W and Y) XI92_26075 PF00293 NUDIX domain XI92_26075 PF13344 Haloacid dehalogenase-like hydrolase XI92_26105 PF13419 Haloacid dehalogenase-like hydrolase XI92_26130 PF00005 ABC transporter XI92_26160 PF00224 Pyruvate kinase, barrel domain XI92_26160 PF02887 Pyruvate kinase, alpha/beta domain XI92_26160 PF00391 PEP-utilising enzyme, mobile domain XI92_26170 PF00881 Nitroreductase family XI92_26175 PF01638 HxlR-like helix-turn-helix XI92_26180 PF03129 Anticodon binding domain XI92_26180 PF13393 Histidyl-tRNA synthetase XI92_26185 PF04073 Aminoacyl-tRNA editing domain XI92_26200 PF03606 C4-dicarboxylate anaerobic carrier XI92_26205 PF03737 Aldolase/RraA XI92_26225 PF00005 ABC transporter XI92_26235 PF14256 YwiC-like protein XI92_26255 PF02525 Flavodoxin-like fold XI92_26265 PF02667 Short chain fatty acid transporter XI92_26280 PF07690 Major Facilitator Superfamily XI92_26285 PF01047 MarR family XI92_26290 PF12697 Alpha/beta hydrolase family XI92_26300 PF07690 Major Facilitator Superfamily XI92_26305 PF14044 NETI protein XI92_26310 PF09587 Bacterial capsule synthesis protein PGA_cap XI92_26315 PF02557 D-alanyl-D-alanine carboxypeptidase XI92_26340 PF04740 LXG domain of WXG superfamily XI92_26340 PF14449 Pre-toxin TG XI92_26340 PF14431 YwqJ-like deaminase XI92_26350 PF04493 Endonuclease V XI92_26420 PF01695 IstB-like ATP binding protein XI92_26425 PF00665 Integrase core domain XI92_26440 PF01520 N-acetylmuramoyl-L-alanine amidase XI92_26440 PF00395 S-layer homology domain XI92_26445 PF01381 Helix-turn-helix XI92_26460 PF01522 Polysaccharide deacetylase XI92_26465 PF17932 Tetracyclin repressor-like, C-terminal domain XI92_26465 PF00440 Bacterial regulatory proteins, tetR family XI92_26470 PF13537 Glutamine amidotransferase domain XI92_26470 PF00733 Asparagine synthase XI92_26500 PF01842 ACT domain XI92_26500 PF03315 Serine dehydratase beta chain XI92_26505 PF03313 Serine dehydratase alpha chain XI92_26515 PF01609 Transposase DDE domain XI92_26545 PF00282 Pyridoxal-dependent decarboxylase conserved domain XI92_26560 PF05504 Spore germination B3/ GerAC like, C-terminal XI92_26570 PF01098 Cell cycle protein XI92_26580 PF00571 CBS domain XI92_26580 PF01769 Divalent cation transporter XI92_26580 PF03448 MgtE intracellular N domain XI92_26590 PF00905 Penicillin binding protein transpeptidase domain XI92_26590 PF05223 NTF2-like N-terminal transpeptidase domain XI92_26590 PF03717 Penicillin-binding Protein dimerisation domain XI92_26595 PF08281 Sigma-70, region 4 XI92_26595 PF04542 Sigma-70 region 2 XI92_26625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_26625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_26640 PF00005 ABC transporter XI92_26650 PF00440 Bacterial regulatory proteins, tetR family XI92_26650 PF08359 YsiA-like protein, C-terminal region XI92_26665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XI92_26665 PF02770 Acyl-CoA dehydrogenase, middle domain XI92_26665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XI92_26670 PF02785 Biotin carboxylase C-terminal domain XI92_26670 PF00289 Biotin carboxylase, N-terminal domain XI92_26670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XI92_26675 PF00364 Biotin-requiring enzyme XI92_26680 PF00682 HMGL-like XI92_26685 PF00378 Enoyl-CoA hydratase/isomerase XI92_26690 PF01039 Carboxyl transferase domain XI92_26695 PF13193 AMP-binding enzyme C-terminal domain XI92_26695 PF00501 AMP-binding enzyme XI92_26695 PF16177 Acetyl-coenzyme A synthetase N-terminus XI92_26720 PF02371 Transposase IS116/IS110/IS902 family XI92_26720 PF01548 Transposase XI92_26735 PF00485 Phosphoribulokinase / Uridine kinase family XI92_26750 PF07943 Penicillin-binding protein 5, C-terminal domain XI92_26750 PF00768 D-alanyl-D-alanine carboxypeptidase XI92_26755 PF00512 His Kinase A (phospho-acceptor) domain XI92_26755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_26765 PF00072 Response regulator receiver domain XI92_26765 PF00486 Transcriptional regulatory protein, C terminal XI92_26770 PF01966 HD domain XI92_26775 PF13021 Domain of unknown function (DUF3885) XI92_26780 PF01048 Phosphorylase superfamily XI92_26795 PF03413 Peptidase propeptide and YPEB domain XI92_26795 PF07504 Fungalysin/Thermolysin Propeptide Motif XI92_26795 PF02868 Thermolysin metallopeptidase, alpha-helical domain XI92_26795 PF01447 Thermolysin metallopeptidase, catalytic domain XI92_26800 PF12833 Helix-turn-helix domain XI92_26800 PF17853 GGDEF-like domain XI92_26825 PF00665 Integrase core domain XI92_26830 PF01695 IstB-like ATP binding protein XI92_26840 PF09278 MerR, DNA binding XI92_26840 PF00376 MerR family regulatory protein XI92_26855 PF14552 Tautomerase enzyme XI92_26860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_26860 PF03466 LysR substrate binding domain XI92_26870 PF00005 ABC transporter XI92_26900 PF00392 Bacterial regulatory proteins, gntR family XI92_26900 PF00155 Aminotransferase class I and II XI92_26905 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal XI92_26905 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal XI92_26930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_26935 PF01609 Transposase DDE domain XI92_26950 PF04239 Protein of unknown function (DUF421) XI92_26955 PF01965 DJ-1/PfpI family XI92_26965 PF08450 SMP-30/Gluconolactonase/LRE-like region XI92_26975 PF01921 tRNA synthetases class I (K) XI92_26980 PF07486 Cell Wall Hydrolase XI92_26990 PF00486 Transcriptional regulatory protein, C terminal XI92_26990 PF00072 Response regulator receiver domain XI92_27000 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_27020 PF00005 ABC transporter XI92_27025 PF02687 FtsX-like permease family XI92_27045 PF00742 Homoserine dehydrogenase XI92_27045 PF01842 ACT domain XI92_27045 PF03447 Homoserine dehydrogenase, NAD binding domain XI92_27050 PF00155 Aminotransferase class I and II XI92_27050 PF00392 Bacterial regulatory proteins, gntR family XI92_27055 PF07478 D-ala D-ala ligase C-terminus XI92_27055 PF01820 D-ala D-ala ligase N-terminus XI92_27060 PF03070 TENA/THI-4/PQQC family XI92_27095 PF01548 Transposase XI92_27095 PF02371 Transposase IS116/IS110/IS902 family XI92_27120 PF00067 Cytochrome P450 XI92_27130 PF00132 Bacterial transferase hexapeptide (six repeats) XI92_27135 PF07561 Domain of Unknown Function (DUF1540) XI92_27145 PF00067 Cytochrome P450 XI92_27160 PF13426 PAS domain XI92_27160 PF00989 PAS fold XI92_27160 PF13188 PAS domain XI92_27160 PF00512 His Kinase A (phospho-acceptor) domain XI92_27160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_27170 PF10502 Signal peptidase, peptidase S26 XI92_27175 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase XI92_27180 PF01177 Asp/Glu/Hydantoin racemase XI92_27185 PF07155 ECF-type riboflavin transporter, S component XI92_27190 PF00005 ABC transporter XI92_27190 PF12558 ATP-binding cassette cobalt transporter XI92_27200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_27200 PF00512 His Kinase A (phospho-acceptor) domain XI92_27205 PF00589 Phage integrase family XI92_27205 PF14659 Phage integrase, N-terminal SAM-like domain XI92_27230 PF10676 Spore germination protein gerPA/gerPF XI92_27240 PF01545 Cation efflux family XI92_27240 PF16916 Dimerisation domain of Zinc Transporter XI92_27245 PF10676 Spore germination protein gerPA/gerPF XI92_27265 PF00072 Response regulator receiver domain XI92_27265 PF00486 Transcriptional regulatory protein, C terminal XI92_27270 PF00512 His Kinase A (phospho-acceptor) domain XI92_27270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_27270 PF18719 ArlS sensor domain XI92_27275 PF08240 Alcohol dehydrogenase GroES-like domain XI92_27275 PF00107 Zinc-binding dehydrogenase XI92_27280 PF01569 PAP2 superfamily XI92_27330 PF07690 Major Facilitator Superfamily XI92_27335 PF07690 Major Facilitator Superfamily XI92_27355 PF03009 Glycerophosphoryl diester phosphodiesterase family XI92_27370 PF00392 Bacterial regulatory proteins, gntR family XI92_27370 PF00155 Aminotransferase class I and II XI92_27375 PF00892 EamA-like transporter family XI92_27380 PF01270 Glycosyl hydrolases family 8 XI92_27385 PF01156 Inosine-uridine preferring nucleoside hydrolase XI92_27395 PF01784 NIF3 (NGG1p interacting factor 3) XI92_27420 PF07690 Major Facilitator Superfamily XI92_27430 PF00293 NUDIX domain XI92_27430 PF09297 NADH pyrophosphatase zinc ribbon domain XI92_27435 PF02768 DNA polymerase III beta subunit, C-terminal domain XI92_27435 PF02767 DNA polymerase III beta subunit, central domain XI92_27435 PF00712 DNA polymerase III beta subunit, N-terminal domain XI92_27445 PF12706 Beta-lactamase superfamily domain XI92_27460 PF09234 Domain of unknown function (DUF1963) XI92_27485 PF01734 Patatin-like phospholipase XI92_27490 PF08000 Bacterial PH domain XI92_27500 PF12867 DinB superfamily XI92_27515 PF02673 Bacitracin resistance protein BacA XI92_27525 PF01541 GIY-YIG catalytic domain XI92_27545 PF01266 FAD dependent oxidoreductase XI92_27575 PF00486 Transcriptional regulatory protein, C terminal XI92_27575 PF00072 Response regulator receiver domain XI92_27580 PF16736 Single Cache-like XI92_27580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_27580 PF00989 PAS fold XI92_27580 PF00512 His Kinase A (phospho-acceptor) domain XI92_27595 PF00005 ABC transporter XI92_27600 PF02687 FtsX-like permease family XI92_27600 PF12704 MacB-like periplasmic core domain XI92_27610 PF07859 alpha/beta hydrolase fold XI92_27615 PF00282 Pyridoxal-dependent decarboxylase conserved domain XI92_27625 PF13700 Domain of unknown function (DUF4158) XI92_27625 PF01526 Tn3 transposase DDE domain XI92_27630 PF02796 Helix-turn-helix domain of resolvase XI92_27630 PF00239 Resolvase, N terminal domain XI92_27635 PF01695 IstB-like ATP binding protein XI92_27640 PF00665 Integrase core domain XI92_27660 PF03714 Bacterial pullanase-associated domain XI92_27660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XI92_27660 PF00128 Alpha amylase, catalytic domain XI92_27665 PF02868 Thermolysin metallopeptidase, alpha-helical domain XI92_27665 PF07504 Fungalysin/Thermolysin Propeptide Motif XI92_27665 PF03413 Peptidase propeptide and YPEB domain XI92_27665 PF01447 Thermolysin metallopeptidase, catalytic domain XI92_27670 PF00149 Calcineurin-like phosphoesterase XI92_27670 PF02872 5'-nucleotidase, C-terminal domain XI92_27685 PF00344 SecY translocase XI92_27690 PF00892 EamA-like transporter family XI92_27695 PF00392 Bacterial regulatory proteins, gntR family XI92_27695 PF00155 Aminotransferase class I and II XI92_27705 PF00561 alpha/beta hydrolase fold XI92_27730 PF06081 Aromatic acid exporter family member 1 XI92_27730 PF06081 Aromatic acid exporter family member 1 XI92_27745 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) XI92_27750 PF14620 YpeB sporulation XI92_27750 PF03413 Peptidase propeptide and YPEB domain XI92_27755 PF07486 Cell Wall Hydrolase XI92_27755 PF01471 Putative peptidoglycan binding domain XI92_27775 PF03301 Tryptophan 2,3-dioxygenase XI92_27780 PF04199 Putative cyclase XI92_27785 PF00266 Aminotransferase class-V XI92_27790 PF08359 YsiA-like protein, C-terminal region XI92_27790 PF00440 Bacterial regulatory proteins, tetR family XI92_27795 PF13344 Haloacid dehalogenase-like hydrolase XI92_27795 PF00293 NUDIX domain XI92_27820 PF02954 Bacterial regulatory protein, Fis family XI92_27820 PF01590 GAF domain XI92_27820 PF00158 Sigma-54 interaction domain XI92_27855 PF02082 Transcriptional regulator XI92_27865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XI92_27865 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_27870 PF00364 Biotin-requiring enzyme XI92_27870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XI92_27870 PF02817 e3 binding domain XI92_27875 PF02779 Transketolase, pyrimidine binding domain XI92_27875 PF02780 Transketolase, C-terminal domain XI92_27880 PF00676 Dehydrogenase E1 component XI92_27890 PF07690 Major Facilitator Superfamily XI92_27910 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_27915 PF01609 Transposase DDE domain XI92_27925 PF00106 short chain dehydrogenase XI92_27930 PF13673 Acetyltransferase (GNAT) domain XI92_27930 PF04229 GrpB protein XI92_27970 PF00528 Binding-protein-dependent transport system inner membrane component XI92_27975 PF00571 CBS domain XI92_27975 PF00005 ABC transporter XI92_27980 PF04069 Substrate binding domain of ABC-type glycine betaine transport system XI92_27985 PF00574 Clp protease XI92_28000 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XI92_28005 PF13673 Acetyltransferase (GNAT) domain XI92_28010 PF18416 N-acetylglucosamine binding protein domain 2 XI92_28010 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading XI92_28015 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase XI92_28020 PF03781 Sulfatase-modifying factor enzyme 1 XI92_28040 PF08241 Methyltransferase domain XI92_28045 PF04237 YjbR XI92_28090 PF00583 Acetyltransferase (GNAT) family XI92_28095 PF13538 UvrD-like helicase C-terminal domain XI92_28105 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like XI92_28110 PF00271 Helicase conserved C-terminal domain XI92_28110 PF16124 RecQ zinc-binding XI92_28110 PF00270 DEAD/DEAH box helicase XI92_28110 PF09382 RQC domain XI92_28110 PF00570 HRDC domain XI92_28130 PF13333 Integrase core domain XI92_28130 PF13276 HTH-like domain XI92_28130 PF00665 Integrase core domain XI92_28150 PF13333 Integrase core domain XI92_28150 PF00665 Integrase core domain XI92_28155 PF12123 N-acetylmuramoyl-l-alanine amidase XI92_28155 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_28175 PF01368 DHH family XI92_28175 PF02833 DHHA2 domain XI92_28180 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading XI92_28180 PF18416 N-acetylglucosamine binding protein domain 2 XI92_28195 PF03193 RsgA GTPase XI92_28200 PF02627 Carboxymuconolactone decarboxylase family XI92_28205 PF01235 Sodium:alanine symporter family XI92_28210 PF00171 Aldehyde dehydrogenase family XI92_28215 PF00701 Dihydrodipicolinate synthetase family XI92_28220 PF05544 Proline racemase XI92_28225 PF05544 Proline racemase XI92_28230 PF01266 FAD dependent oxidoreductase XI92_28235 PF02954 Bacterial regulatory protein, Fis family XI92_28235 PF00158 Sigma-54 interaction domain XI92_28235 PF13426 PAS domain XI92_28240 PF04324 BFD-like [2Fe-2S] binding domain XI92_28240 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_28250 PF07992 Pyridine nucleotide-disulphide oxidoreductase XI92_28250 PF04324 BFD-like [2Fe-2S] binding domain XI92_28265 PF08876 Domain of unknown function (DUF1836) XI92_28270 PF09335 SNARE associated Golgi protein XI92_28280 PF04914 DltD protein XI92_28290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_28295 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain XI92_28295 PF00877 NlpC/P60 family XI92_28300 PF13378 Enolase C-terminal domain-like XI92_28300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XI92_28315 PF00248 Aldo/keto reductase family XI92_28320 PF01965 DJ-1/PfpI family XI92_28350 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XI92_28350 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XI92_28360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_28360 PF00672 HAMP domain XI92_28360 PF00512 His Kinase A (phospho-acceptor) domain XI92_28365 PF00486 Transcriptional regulatory protein, C terminal XI92_28365 PF00072 Response regulator receiver domain XI92_28385 PF01048 Phosphorylase superfamily XI92_28390 PF03808 Glycosyl transferase WecB/TagA/CpsF family XI92_28395 PF01432 Peptidase family M3 XI92_28395 PF08439 Oligopeptidase F XI92_28400 PF02645 Uncharacterised protein, DegV family COG1307 XI92_28405 PF07552 Spore Coat Protein X and V domain XI92_28440 PF07690 Major Facilitator Superfamily XI92_28450 PF04519 Polymer-forming cytoskeletal XI92_28455 PF13171 Protein of unknown function (DUF4004) XI92_28465 PF07690 Major Facilitator Superfamily XI92_28485 PF04226 Transglycosylase associated protein XI92_28535 PF00155 Aminotransferase class I and II XI92_28540 PF07977 FabA-like domain XI92_28545 PF03630 Fumble XI92_28565 PF00005 ABC transporter XI92_28620 PF01594 AI-2E family transporter XI92_28635 PF00296 Luciferase-like monooxygenase XI92_28640 PF00528 Binding-protein-dependent transport system inner membrane component XI92_28645 PF09084 NMT1/THI5 like XI92_28650 PF00005 ABC transporter XI92_28675 PF02522 Aminoglycoside 3-N-acetyltransferase XI92_28695 PF13536 Putative multidrug resistance efflux transporter XI92_28715 PF08713 DNA alkylation repair enzyme XI92_28720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XI92_28725 PF01522 Polysaccharide deacetylase XI92_28730 PF03741 Integral membrane protein TerC family XI92_28735 PF00884 Sulfatase XI92_28740 PF00005 ABC transporter XI92_28740 PF12848 ABC transporter XI92_28750 PF01609 Transposase DDE domain XI92_28755 PF03176 MMPL family XI92_28760 PF00440 Bacterial regulatory proteins, tetR family XI92_28760 PF16295 Tetracyclin repressor-like, C-terminal domain XI92_28770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XI92_28775 PF02153 Prephenate dehydrogenase XI92_28775 PF01842 ACT domain XI92_28780 PF00155 Aminotransferase class I and II XI92_28785 PF01264 Chorismate synthase XI92_28790 PF00793 DAHP synthetase I family XI92_28790 PF01817 Chorismate mutase type II XI92_28810 PF01636 Phosphotransferase enzyme family XI92_28830 PF01476 LysM domain XI92_28830 PF06725 3D domain XI92_28840 PF08031 Berberine and berberine like XI92_28840 PF01565 FAD binding domain XI92_28855 PF06039 Malate:quinone oxidoreductase (Mqo) XI92_28860 PF13407 Periplasmic binding protein domain XI92_28865 PF02653 Branched-chain amino acid transport system / permease component XI92_28870 PF02653 Branched-chain amino acid transport system / permease component XI92_28875 PF00005 ABC transporter XI92_28880 PF00325 Bacterial regulatory proteins, crp family XI92_28880 PF04198 Putative sugar-binding domain XI92_28885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XI92_28885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XI92_28895 PF01791 DeoC/LacD family aldolase XI92_28910 PF03992 Antibiotic biosynthesis monooxygenase XI92_28930 PF07662 Na+ dependent nucleoside transporter C-terminus XI92_28930 PF01773 Na+ dependent nucleoside transporter N-terminus XI92_28940 PF13333 Integrase core domain XI92_28940 PF00665 Integrase core domain XI92_28940 PF13276 HTH-like domain XI92_28945 PF00171 Aldehyde dehydrogenase family XI92_28950 PF00696 Amino acid kinase family XI92_28950 PF01472 PUA domain XI92_28955 PF03807 NADP oxidoreductase coenzyme F420-dependent XI92_28955 PF14748 Pyrroline-5-carboxylate reductase dimerisation XI92_28960 PF01546 Peptidase family M20/M25/M40 XI92_28965 PF01614 Bacterial transcriptional regulator XI92_28965 PF09339 IclR helix-turn-helix domain XI92_28970 PF00324 Amino acid permease XI92_28980 PF00487 Fatty acid desaturase XI92_28985 PF05547 Immune inhibitor A peptidase M6 XI92_28990 PF04294 VanW like protein XI92_28995 PF00245 Alkaline phosphatase XI92_29000 PF11188 Protein of unknown function (DUF2975) XI92_29005 PF13443 Cro/C1-type HTH DNA-binding domain XI92_29025 PF13302 Acetyltransferase (GNAT) domain XI92_29030 PF12681 Glyoxalase-like domain XI92_29045 PF00665 Integrase core domain XI92_29050 PF01695 IstB-like ATP binding protein XI92_29060 PF17863 AAA lid domain XI92_29060 PF07726 ATPase family associated with various cellular activities (AAA) XI92_29075 PF07690 Major Facilitator Superfamily XI92_29085 PF00535 Glycosyl transferase family 2 XI92_29105 PF00535 Glycosyl transferase family 2 XI92_29115 PF00535 Glycosyl transferase family 2 XI92_29120 PF00535 Glycosyl transferase family 2 XI92_29135 PF00199 Catalase XI92_29135 PF06628 Catalase-related immune-responsive XI92_29140 PF01752 Collagenase XI92_29140 PF08453 Peptidase family M9 N-terminal XI92_29140 PF18496 Collagenase G catalytic helper subdomain XI92_29140 PF04151 Bacterial pre-peptidase C-terminal domain XI92_29150 PF13382 Adenine deaminase C-terminal domain XI92_29150 PF01979 Amidohydrolase family XI92_29155 PF00144 Beta-lactamase XI92_29175 PF17863 AAA lid domain XI92_29175 PF07726 ATPase family associated with various cellular activities (AAA) XI92_29235 PF14436 Bacterial EndoU nuclease XI92_29235 PF04740 LXG domain of WXG superfamily XI92_29255 PF00881 Nitroreductase family XI92_29260 PF01047 MarR family XI92_29265 PF00009 Elongation factor Tu GTP binding domain XI92_29265 PF00679 Elongation factor G C-terminus XI92_29265 PF14492 Elongation Factor G, domain II XI92_29265 PF03764 Elongation factor G, domain IV XI92_29275 PF00293 NUDIX domain XI92_29280 PF05406 WGR domain XI92_29300 PF12833 Helix-turn-helix domain XI92_29305 PF14437 MafB19-like deaminase XI92_29305 PF01171 PP-loop family XI92_29305 PF11734 TilS substrate C-terminal domain XI92_29310 PF00583 Acetyltransferase (GNAT) family XI92_29325 PF00892 EamA-like transporter family XI92_29330 PF00392 Bacterial regulatory proteins, gntR family XI92_29330 PF00155 Aminotransferase class I and II XI92_29335 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 XI92_29340 PF13031 Protein of unknown function (DUF3892) XI92_29370 PF01925 Sulfite exporter TauE/SafE XI92_29380 PF00324 Amino acid permease XI92_29425 PF10502 Signal peptidase, peptidase S26 XI92_29440 PF02146 Sir2 family XI92_29445 PF01470 Pyroglutamyl peptidase XI92_29460 PF03746 LamB/YcsF family XI92_29465 PF02626 Carboxyltransferase domain, subdomain A and B XI92_29470 PF02682 Carboxyltransferase domain, subdomain C and D XI92_29475 PF01614 Bacterial transcriptional regulator XI92_29475 PF09339 IclR helix-turn-helix domain XI92_29480 PF10502 Signal peptidase, peptidase S26 XI92_29485 PF03932 CutC family XI92_29500 PF02770 Acyl-CoA dehydrogenase, middle domain XI92_29500 PF08028 Acyl-CoA dehydrogenase, C-terminal domain XI92_29500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XI92_29525 PF00583 Acetyltransferase (GNAT) family XI92_29530 PF10903 Protein of unknown function (DUF2691) XI92_29535 PF02915 Rubrerythrin XI92_29545 PF13333 Integrase core domain XI92_29545 PF13276 HTH-like domain XI92_29545 PF00665 Integrase core domain XI92_29560 PF00440 Bacterial regulatory proteins, tetR family XI92_29565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XI92_29565 PF00391 PEP-utilising enzyme, mobile domain XI92_29580 PF01037 Lrp/AsnC ligand binding domain XI92_29590 PF00753 Metallo-beta-lactamase superfamily XI92_29595 PF10710 Protein of unknown function (DUF2512) XI92_29600 PF11553 Protein of unknown function (DUF3231) XI92_29605 PF00269 Small, acid-soluble spore proteins, alpha/beta type XI92_29610 PF08240 Alcohol dehydrogenase GroES-like domain XI92_29610 PF13823 Alcohol dehydrogenase GroES-associated XI92_29610 PF00107 Zinc-binding dehydrogenase XI92_29615 PF13426 PAS domain XI92_29615 PF13188 PAS domain XI92_29615 PF00512 His Kinase A (phospho-acceptor) domain XI92_29615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_29615 PF00989 PAS fold XI92_29680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_29690 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_29695 PF01348 Type II intron maturase XI92_29695 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_29700 PF00665 Integrase core domain XI92_29705 PF01695 IstB-like ATP binding protein XI92_29835 PF03123 CAT RNA binding domain XI92_29835 PF00874 PRD domain XI92_29840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XI92_29840 PF00367 phosphotransferase system, EIIB XI92_29840 PF02378 Phosphotransferase system, EIIC XI92_29845 PF00232 Glycosyl hydrolase family 1 XI92_29880 PF13302 Acetyltransferase (GNAT) domain XI92_29920 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_29925 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_29935 PF01348 Type II intron maturase XI92_29935 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_29980 PF02371 Transposase IS116/IS110/IS902 family XI92_29980 PF01548 Transposase XI92_30030 PF01609 Transposase DDE domain XI92_30045 PF01609 Transposase DDE domain XI92_30065 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_30075 PF13610 DDE domain XI92_30080 PF13495 Phage integrase, N-terminal SAM-like domain XI92_30080 PF00589 Phage integrase family XI92_30090 PF13302 Acetyltransferase (GNAT) domain XI92_30100 PF12146 Serine aminopeptidase, S33 XI92_30100 PF13026 Protein of unknown function (DUF3887) XI92_30105 PF00854 POT family XI92_30110 PF01695 IstB-like ATP binding protein XI92_30115 PF00665 Integrase core domain XI92_30140 PF07681 DoxX XI92_30145 PF13193 AMP-binding enzyme C-terminal domain XI92_30145 PF00501 AMP-binding enzyme XI92_30165 PF00128 Alpha amylase, catalytic domain XI92_30165 PF00686 Starch binding domain XI92_30165 PF01833 IPT/TIG domain XI92_30170 PF07690 Major Facilitator Superfamily XI92_30190 PF00005 ABC transporter XI92_30200 PF00486 Transcriptional regulatory protein, C terminal XI92_30200 PF00072 Response regulator receiver domain XI92_30205 PF00512 His Kinase A (phospho-acceptor) domain XI92_30205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XI92_30205 PF00672 HAMP domain XI92_30230 PF13333 Integrase core domain XI92_30230 PF00665 Integrase core domain XI92_30230 PF13276 HTH-like domain XI92_30235 PF01066 CDP-alcohol phosphatidyltransferase XI92_30245 PF01022 Bacterial regulatory protein, arsR family XI92_30260 PF01385 Probable transposase XI92_30260 PF12323 Helix-turn-helix domain XI92_30260 PF07282 Putative transposase DNA-binding domain XI92_30270 PF18801 response regulator aspartate phosphatase H, N terminal XI92_30275 PF12323 Helix-turn-helix domain XI92_30275 PF07282 Putative transposase DNA-binding domain XI92_30275 PF01385 Probable transposase XI92_30295 PF01022 Bacterial regulatory protein, arsR family XI92_30315 PF00565 Staphylococcal nuclease homologue XI92_30320 PF06800 Sugar transport protein XI92_30335 PF00664 ABC transporter transmembrane region XI92_30335 PF00005 ABC transporter XI92_30340 PF06463 Molybdenum Cofactor Synthesis C XI92_30340 PF04055 Radical SAM superfamily XI92_30350 PF00005 ABC transporter XI92_30360 PF00082 Subtilase family XI92_30365 PF02677 Epoxyqueuosine reductase QueH XI92_30370 PF08378 Nuclease-related domain XI92_30400 PF01476 LysM domain XI92_30400 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_30400 PF01471 Putative peptidoglycan binding domain XI92_30430 PF00665 Integrase core domain XI92_30430 PF13276 HTH-like domain XI92_30430 PF13333 Integrase core domain XI92_30450 PF00005 ABC transporter XI92_30455 PF00005 ABC transporter XI92_30455 PF00664 ABC transporter transmembrane region XI92_30460 PF13575 Domain of unknown function (DUF4135) XI92_30460 PF05147 Lanthionine synthetase C-like protein XI92_30475 PF02195 ParB-like nuclease domain XI92_30480 PF02423 Ornithine cyclodeaminase/mu-crystallin family XI92_30485 PF00291 Pyridoxal-phosphate dependent enzyme XI92_30490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XI92_30490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XI92_30495 PF01648 4'-phosphopantetheinyl transferase superfamily XI92_30500 PF00501 AMP-binding enzyme XI92_30500 PF00668 Condensation domain XI92_30500 PF13193 AMP-binding enzyme C-terminal domain XI92_30500 PF00550 Phosphopantetheine attachment site XI92_30500 PF00975 Thioesterase domain XI92_30510 PF00668 Condensation domain XI92_30510 PF00550 Phosphopantetheine attachment site XI92_30510 PF00501 AMP-binding enzyme XI92_30510 PF13193 AMP-binding enzyme C-terminal domain XI92_30520 PF00664 ABC transporter transmembrane region XI92_30520 PF00005 ABC transporter XI92_30525 PF00296 Luciferase-like monooxygenase XI92_30530 PF00668 Condensation domain XI92_30530 PF13193 AMP-binding enzyme C-terminal domain XI92_30530 PF16197 Ketoacyl-synthetase C-terminal extension XI92_30530 PF08659 KR domain XI92_30530 PF00550 Phosphopantetheine attachment site XI92_30530 PF02801 Beta-ketoacyl synthase, C-terminal domain XI92_30530 PF00501 AMP-binding enzyme XI92_30530 PF00109 Beta-ketoacyl synthase, N-terminal domain XI92_30530 PF14765 Polyketide synthase dehydratase XI92_30535 PF00668 Condensation domain XI92_30535 PF00975 Thioesterase domain XI92_30535 PF00550 Phosphopantetheine attachment site XI92_30535 PF13193 AMP-binding enzyme C-terminal domain XI92_30535 PF00501 AMP-binding enzyme XI92_30540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XI92_30540 PF02770 Acyl-CoA dehydrogenase, middle domain XI92_30540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XI92_30545 PF00550 Phosphopantetheine attachment site XI92_30550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XI92_30550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XI92_30555 PF00698 Acyl transferase domain XI92_30565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XI92_30565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XI92_30565 PF02770 Acyl-CoA dehydrogenase, middle domain XI92_30575 PF00668 Condensation domain XI92_30575 PF00501 AMP-binding enzyme XI92_30575 PF13193 AMP-binding enzyme C-terminal domain XI92_30575 PF00550 Phosphopantetheine attachment site XI92_30580 PF00550 Phosphopantetheine attachment site XI92_30580 PF00668 Condensation domain XI92_30580 PF13193 AMP-binding enzyme C-terminal domain XI92_30580 PF00975 Thioesterase domain XI92_30580 PF00501 AMP-binding enzyme XI92_30585 PF00109 Beta-ketoacyl synthase, N-terminal domain XI92_30585 PF16197 Ketoacyl-synthetase C-terminal extension XI92_30585 PF00501 AMP-binding enzyme XI92_30585 PF00668 Condensation domain XI92_30585 PF13193 AMP-binding enzyme C-terminal domain XI92_30585 PF00501 AMP-binding enzyme XI92_30585 PF00550 Phosphopantetheine attachment site XI92_30585 PF08659 KR domain XI92_30585 PF13193 AMP-binding enzyme C-terminal domain XI92_30585 PF02801 Beta-ketoacyl synthase, C-terminal domain XI92_30585 PF00668 Condensation domain XI92_30585 PF14765 Polyketide synthase dehydratase XI92_30585 PF00109 Beta-ketoacyl synthase, N-terminal domain XI92_30585 PF16197 Ketoacyl-synthetase C-terminal extension XI92_30585 PF00550 Phosphopantetheine attachment site XI92_30585 PF02801 Beta-ketoacyl synthase, C-terminal domain XI92_30585 PF14765 Polyketide synthase dehydratase XI92_30585 PF08659 KR domain XI92_30600 PF02463 RecF/RecN/SMC N terminal domain XI92_30605 PF01609 Transposase DDE domain XI92_30610 PF00975 Thioesterase domain XI92_30610 PF00550 Phosphopantetheine attachment site XI92_30610 PF00501 AMP-binding enzyme XI92_30610 PF13193 AMP-binding enzyme C-terminal domain XI92_30610 PF00668 Condensation domain XI92_30615 PF00248 Aldo/keto reductase family XI92_30640 PF01381 Helix-turn-helix XI92_30645 PF00132 Bacterial transferase hexapeptide (six repeats) XI92_30650 PF01609 Transposase DDE domain XI92_30655 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_30690 PF18801 response regulator aspartate phosphatase H, N terminal XI92_30700 PF13361 UvrD-like helicase C-terminal domain XI92_30700 PF00580 UvrD/REP helicase N-terminal domain XI92_30705 PF00665 Integrase core domain XI92_30710 PF01695 IstB-like ATP binding protein XI92_30730 PF07693 KAP family P-loop domain XI92_30740 PF00817 impB/mucB/samB family XI92_30740 PF11798 IMS family HHH motif XI92_30740 PF11799 impB/mucB/samB family C-terminal domain XI92_30750 PF18801 response regulator aspartate phosphatase H, N terminal XI92_30750 PF13176 Tetratricopeptide repeat XI92_30760 PF00583 Acetyltransferase (GNAT) family XI92_30760 PF01047 MarR family XI92_30800 PF13291 ACT domain XI92_30800 PF04607 Region found in RelA / SpoT proteins XI92_30800 PF02824 TGS domain XI92_30810 PF00216 Bacterial DNA-binding protein XI92_30815 PF07282 Putative transposase DNA-binding domain XI92_30815 PF12323 Helix-turn-helix domain XI92_30815 PF01385 Probable transposase XI92_30825 PF18801 response regulator aspartate phosphatase H, N terminal XI92_30830 PF11799 impB/mucB/samB family C-terminal domain XI92_30830 PF11798 IMS family HHH motif XI92_30830 PF00817 impB/mucB/samB family XI92_30890 PF00733 Asparagine synthase XI92_30890 PF13537 Glutamine amidotransferase domain XI92_30895 PF17932 Tetracyclin repressor-like, C-terminal domain XI92_30895 PF00440 Bacterial regulatory proteins, tetR family XI92_30900 PF07282 Putative transposase DNA-binding domain XI92_30900 PF01385 Probable transposase XI92_30900 PF12323 Helix-turn-helix domain XI92_30910 PF00005 ABC transporter XI92_30920 PF00072 Response regulator receiver domain XI92_30920 PF00486 Transcriptional regulatory protein, C terminal XI92_30930 PF01520 N-acetylmuramoyl-L-alanine amidase XI92_30930 PF00395 S-layer homology domain XI92_30945 PF14436 Bacterial EndoU nuclease XI92_30945 PF04740 LXG domain of WXG superfamily XI92_30975 PF00486 Transcriptional regulatory protein, C terminal XI92_30975 PF00072 Response regulator receiver domain XI92_30985 PF13847 Methyltransferase domain XI92_30985 PF00069 Protein kinase domain XI92_30990 PF07282 Putative transposase DNA-binding domain XI92_30990 PF01385 Probable transposase XI92_30990 PF12323 Helix-turn-helix domain XI92_31005 PF13276 HTH-like domain XI92_31005 PF00665 Integrase core domain XI92_31005 PF13333 Integrase core domain XI92_31035 PF07282 Putative transposase DNA-binding domain XI92_31035 PF12323 Helix-turn-helix domain XI92_31035 PF01385 Probable transposase XI92_31040 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XI92_31040 PF13457 GW (Gly-Tryp) dipeptide domain XI92_31050 PF01548 Transposase XI92_31050 PF02371 Transposase IS116/IS110/IS902 family XI92_31060 PF01471 Putative peptidoglycan binding domain XI92_31060 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_31060 PF01476 LysM domain XI92_31065 PF01551 Peptidase family M23 XI92_31065 PF04225 Opacity-associated protein A LysM-like domain XI92_31115 PF01385 Probable transposase XI92_31115 PF07282 Putative transposase DNA-binding domain XI92_31115 PF12323 Helix-turn-helix domain XI92_31120 PF00155 Aminotransferase class I and II XI92_31120 PF00392 Bacterial regulatory proteins, gntR family XI92_31125 PF03591 AzlC protein XI92_31130 PF05437 Branched-chain amino acid transport protein (AzlD) XI92_31155 PF00860 Permease family XI92_31160 PF02560 Cyanate lyase C-terminal domain XI92_31165 PF00484 Carbonic anhydrase XI92_31170 PF01037 Lrp/AsnC ligand binding domain XI92_31195 PF06414 Zeta toxin XI92_31200 PF00293 NUDIX domain XI92_31205 PF00453 Ribosomal protein L20 XI92_31215 PF18801 response regulator aspartate phosphatase H, N terminal XI92_31225 PF00269 Small, acid-soluble spore proteins, alpha/beta type XI92_31230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_31230 PF00672 HAMP domain XI92_31255 PF07282 Putative transposase DNA-binding domain XI92_31255 PF01385 Probable transposase XI92_31255 PF12323 Helix-turn-helix domain XI92_31345 PF01348 Type II intron maturase XI92_31345 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_31500 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_31500 PF01348 Type II intron maturase XI92_31565 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_31575 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_31585 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_31585 PF01348 Type II intron maturase XI92_31605 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) XI92_31630 PF04235 Protein of unknown function (DUF418) XI92_31640 PF14436 Bacterial EndoU nuclease XI92_31640 PF04740 LXG domain of WXG superfamily XI92_31650 PF18801 response regulator aspartate phosphatase H, N terminal XI92_31665 PF01609 Transposase DDE domain XI92_31670 PF01526 Tn3 transposase DDE domain XI92_31670 PF13700 Domain of unknown function (DUF4158) XI92_31675 PF03466 LysR substrate binding domain XI92_31675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_31680 PF03358 NADPH-dependent FMN reductase XI92_31700 PF17443 Uncharacterized protein pXO2-72 XI92_31725 PF01925 Sulfite exporter TauE/SafE XI92_31740 PF00589 Phage integrase family XI92_31745 PF00589 Phage integrase family XI92_31745 PF02899 Phage integrase, N-terminal SAM-like domain XI92_31750 PF11799 impB/mucB/samB family C-terminal domain XI92_31750 PF11798 IMS family HHH motif XI92_31750 PF00817 impB/mucB/samB family XI92_31755 PF01609 Transposase DDE domain XI92_31765 PF00216 Bacterial DNA-binding protein XI92_31780 PF18277 AbrB C-terminal domain XI92_31780 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XI92_31785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_31800 PF00589 Phage integrase family XI92_31800 PF02899 Phage integrase, N-terminal SAM-like domain XI92_31815 PF01609 Transposase DDE domain XI92_31820 PF03515 Colicin-like bacteriocin tRNase domain XI92_31820 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 XI92_31850 PF01043 SecA preprotein cross-linking domain XI92_31850 PF07516 SecA Wing and Scaffold domain XI92_31850 PF07517 SecA DEAD-like domain XI92_31850 PF02810 SEC-C motif XI92_31855 PF18801 response regulator aspartate phosphatase H, N terminal XI92_31870 PF01022 Bacterial regulatory protein, arsR family XI92_31880 PF13454 FAD-NAD(P)-binding XI92_31890 PF00892 EamA-like transporter family XI92_31900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_31925 PF00797 N-acetyltransferase XI92_31945 PF01526 Tn3 transposase DDE domain XI92_31945 PF13700 Domain of unknown function (DUF4158) XI92_31950 PF00239 Resolvase, N terminal domain XI92_31950 PF02796 Helix-turn-helix domain of resolvase XI92_31955 PF01695 IstB-like ATP binding protein XI92_31960 PF00665 Integrase core domain XI92_31970 PF03945 delta endotoxin, N-terminal domain XI92_31970 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 XI92_31970 PF03944 delta endotoxin XI92_31970 PF00555 delta endotoxin XI92_31975 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_31975 PF01476 LysM domain XI92_31975 PF01471 Putative peptidoglycan binding domain XI92_31985 PF01609 Transposase DDE domain XI92_31990 PF00665 Integrase core domain XI92_31995 PF01695 IstB-like ATP binding protein XI92_32005 PF01385 Probable transposase XI92_32005 PF07282 Putative transposase DNA-binding domain XI92_32005 PF12323 Helix-turn-helix domain XI92_32015 PF00916 Sulfate permease family XI92_32015 PF01740 STAS domain XI92_32020 PF00582 Universal stress protein family XI92_32025 PF17770 Ribonuclease J C-terminal domain XI92_32025 PF00753 Metallo-beta-lactamase superfamily XI92_32025 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain XI92_32035 PF04239 Protein of unknown function (DUF421) XI92_32040 PF01037 Lrp/AsnC ligand binding domain XI92_32045 PF12706 Beta-lactamase superfamily domain XI92_32055 PF01790 Prolipoprotein diacylglyceryl transferase XI92_32060 PF00239 Resolvase, N terminal domain XI92_32060 PF02796 Helix-turn-helix domain of resolvase XI92_32065 PF13700 Domain of unknown function (DUF4158) XI92_32065 PF01526 Tn3 transposase DDE domain XI92_32100 PF05105 Bacteriophage holin family XI92_32110 PF07029 CryBP1 protein XI92_32120 PF03945 delta endotoxin, N-terminal domain XI92_32120 PF03944 delta endotoxin XI92_32120 PF09131 Bacillus thuringiensis delta-Endotoxin, middle domain XI92_32140 PF00589 Phage integrase family XI92_32140 PF13495 Phage integrase, N-terminal SAM-like domain XI92_32145 PF03945 delta endotoxin, N-terminal domain XI92_32145 PF00555 delta endotoxin XI92_32145 PF03944 delta endotoxin XI92_32150 PF03944 delta endotoxin XI92_32150 PF00555 delta endotoxin XI92_32150 PF03945 delta endotoxin, N-terminal domain XI92_32150 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 XI92_32155 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_32155 PF01476 LysM domain XI92_32155 PF01471 Putative peptidoglycan binding domain XI92_32160 PF00999 Sodium/hydrogen exchanger family XI92_32165 PF02080 TrkA-C domain XI92_32170 PF12729 Four helix bundle sensory module for signal transduction XI92_32170 PF00672 HAMP domain XI92_32170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XI92_32175 PF09131 Bacillus thuringiensis delta-Endotoxin, middle domain XI92_32175 PF03945 delta endotoxin, N-terminal domain XI92_32175 PF03944 delta endotoxin XI92_32180 PF07282 Putative transposase DNA-binding domain XI92_32180 PF01385 Probable transposase XI92_32180 PF12323 Helix-turn-helix domain XI92_32205 PF01695 IstB-like ATP binding protein XI92_32210 PF00665 Integrase core domain XI92_32230 PF01385 Probable transposase XI92_32230 PF12323 Helix-turn-helix domain XI92_32230 PF07282 Putative transposase DNA-binding domain XI92_32240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XI92_32240 PF03466 LysR substrate binding domain XI92_32245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XI92_32245 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XI92_32250 PF01979 Amidohydrolase family XI92_32270 PF17418 Sporulation delaying protein SdpA XI92_32280 PF01022 Bacterial regulatory protein, arsR family XI92_32305 PF05791 Bacillus haemolytic enterotoxin (HBL) XI92_32320 PF07282 Putative transposase DNA-binding domain XI92_32320 PF01385 Probable transposase XI92_32320 PF12323 Helix-turn-helix domain XI92_32330 PF04303 PrpF protein XI92_32335 PF07282 Putative transposase DNA-binding domain XI92_32335 PF12323 Helix-turn-helix domain XI92_32335 PF01385 Probable transposase XI92_32355 PF01751 Toprim domain XI92_32355 PF13342 C-terminal repeat of topoisomerase XI92_32355 PF01131 DNA topoisomerase XI92_32365 PF13276 HTH-like domain XI92_32365 PF13333 Integrase core domain XI92_32365 PF00665 Integrase core domain XI92_32370 PF00797 N-acetyltransferase XI92_32385 PF00589 Phage integrase family XI92_32405 PF18801 response regulator aspartate phosphatase H, N terminal XI92_32410 PF01022 Bacterial regulatory protein, arsR family XI92_32415 PF02600 Disulfide bond formation protein DsbB XI92_32435 PF00565 Staphylococcal nuclease homologue XI92_32445 PF01131 DNA topoisomerase XI92_32445 PF01751 Toprim domain XI92_32445 PF13342 C-terminal repeat of topoisomerase XI92_32460 PF08378 Nuclease-related domain XI92_32495 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_32495 PF01348 Type II intron maturase XI92_32555 PF09704 CRISPR-associated protein (Cas_Cas5) XI92_32665 PF00665 Integrase core domain XI92_32670 PF01695 IstB-like ATP binding protein XI92_32690 PF02768 DNA polymerase III beta subunit, C-terminal domain XI92_32690 PF02767 DNA polymerase III beta subunit, central domain XI92_32690 PF00712 DNA polymerase III beta subunit, N-terminal domain XI92_32695 PF04098 Rad52/22 family double-strand break repair protein XI92_32730 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_32740 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_32745 PF01348 Type II intron maturase XI92_32745 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_32810 PF18840 Large polyvalent protein associated domain 25 XI92_32815 PF18840 Large polyvalent protein associated domain 25 XI92_32815 PF18840 Large polyvalent protein associated domain 25 XI92_32820 PF17630 Family of unknown function (DUF5511) XI92_32825 PF17633 Family of unknown function (DUF5514) XI92_32850 PF17632 Family of unknown function (DUF5513) XI92_32865 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XI92_32910 PF12696 TraM recognition site of TraD and TraG XI92_32930 PF04956 TrbC/VIRB2 family XI92_32955 PF00437 Type II/IV secretion system protein XI92_33040 PF17631 Family of unknown function (DUF5512) XI92_33055 PF17362 Family of unknown function XI92_33065 PF01526 Tn3 transposase DDE domain XI92_33065 PF13700 Domain of unknown function (DUF4158) XI92_33070 PF02796 Helix-turn-helix domain of resolvase XI92_33070 PF00239 Resolvase, N terminal domain XI92_33080 PF00589 Phage integrase family XI92_33080 PF02899 Phage integrase, N-terminal SAM-like domain XI92_33085 PF13700 Domain of unknown function (DUF4158) XI92_33085 PF01526 Tn3 transposase DDE domain XI92_33095 PF08708 Primase C terminal 1 (PriCT-1) XI92_33125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XI92_33130 PF18801 response regulator aspartate phosphatase H, N terminal XI92_33135 PF13152 Protein of unknown function (DUF3967) XI92_33135 PF13411 MerR HTH family regulatory protein XI92_33155 PF13333 Integrase core domain XI92_33155 PF00665 Integrase core domain XI92_33170 PF00239 Resolvase, N terminal domain XI92_33170 PF02796 Helix-turn-helix domain of resolvase XI92_33185 PF01131 DNA topoisomerase XI92_33185 PF01751 Toprim domain XI92_33200 PF13958 Toxin ToxN, type III toxin-antitoxin system XI92_33205 PF13154 Protein of unknown function (DUF3991) XI92_33245 PF03592 Terminase small subunit XI92_33245 PF10668 Phage terminase small subunit XI92_33340 PF04688 SPP1 phage holin XI92_33345 PF01471 Putative peptidoglycan binding domain XI92_33345 PF01476 LysM domain XI92_33345 PF01510 N-acetylmuramoyl-L-alanine amidase XI92_33400 PF01381 Helix-turn-helix XI92_33520 PF03838 Recombination protein U XI92_33550 PF18801 response regulator aspartate phosphatase H, N terminal XI92_33560 PF01435 Peptidase family M48 XI92_33570 PF01526 Tn3 transposase DDE domain XI92_33570 PF13700 Domain of unknown function (DUF4158) XI92_33575 PF00239 Resolvase, N terminal domain XI92_33575 PF02796 Helix-turn-helix domain of resolvase XI92_33580 PF01695 IstB-like ATP binding protein XI92_33585 PF00665 Integrase core domain XI92_33600 PF01446 Replication protein XI92_33620 PF18801 response regulator aspartate phosphatase H, N terminal XI92_33640 PF01076 Plasmid recombination enzyme XI92_33715 PF10135 Rod binding protein XI92_33715 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XI92_33770 PF13538 UvrD-like helicase C-terminal domain XI92_33800 PF01790 Prolipoprotein diacylglyceryl transferase XI92_33810 PF12706 Beta-lactamase superfamily domain XI92_33815 PF01037 Lrp/AsnC ligand binding domain XI92_33820 PF04239 Protein of unknown function (DUF421) XI92_33845 PF00665 Integrase core domain XI92_33850 PF01695 IstB-like ATP binding protein XI92_33990 PF01443 Viral (Superfamily 1) RNA helicase XI92_33990 PF03389 MobA/MobL family XI92_33990 PF17841 BID domain of Bartonella effector protein (Bep) XI92_34005 PF01131 DNA topoisomerase XI92_34005 PF01751 Toprim domain XI92_34070 PF01476 LysM domain XI92_34070 PF01551 Peptidase family M23 XI92_34070 PF08525 Opacity-associated protein A N-terminal motif XI92_34115 PF17874 MalT-like TPR region XI92_34115 PF18801 response regulator aspartate phosphatase H, N terminal XI92_34280 PF00239 Resolvase, N terminal domain XI92_34280 PF02796 Helix-turn-helix domain of resolvase XI92_34300 PF01037 Lrp/AsnC ligand binding domain XI92_34365 PF00665 Integrase core domain XI92_34370 PF01695 IstB-like ATP binding protein XI92_34405 PF01740 STAS domain XI92_34405 PF00916 Sulfate permease family XI92_34415 PF04239 Protein of unknown function (DUF421) XI92_34420 PF01037 Lrp/AsnC ligand binding domain XI92_34425 PF12706 Beta-lactamase superfamily domain XI92_34435 PF01790 Prolipoprotein diacylglyceryl transferase XI92_34440 PF00239 Resolvase, N terminal domain XI92_34440 PF02796 Helix-turn-helix domain of resolvase XI92_34445 PF13700 Domain of unknown function (DUF4158) XI92_34445 PF01526 Tn3 transposase DDE domain XI92_34460 PF00239 Resolvase, N terminal domain XI92_34460 PF02796 Helix-turn-helix domain of resolvase XI92_34465 PF13700 Domain of unknown function (DUF4158) XI92_34465 PF01526 Tn3 transposase DDE domain XI92_34475 PF04740 LXG domain of WXG superfamily XI92_34475 PF14436 Bacterial EndoU nuclease XI92_34485 PF00196 Bacterial regulatory proteins, luxR family XI92_34485 PF00072 Response regulator receiver domain XI92_34505 PF01022 Bacterial regulatory protein, arsR family XI92_34550 PF17209 Hfq protein XI92_34560 PF18801 response regulator aspartate phosphatase H, N terminal XI92_34560 PF17874 MalT-like TPR region XI92_34570 PF02899 Phage integrase, N-terminal SAM-like domain XI92_34570 PF00589 Phage integrase family XI92_34575 PF13700 Domain of unknown function (DUF4158) XI92_34575 PF01526 Tn3 transposase DDE domain XI92_34580 PF01609 Transposase DDE domain XI92_34595 PF01751 Toprim domain XI92_34595 PF01131 DNA topoisomerase XI92_34595 PF13342 C-terminal repeat of topoisomerase XI92_34600 PF00589 Phage integrase family XI92_34600 PF02899 Phage integrase, N-terminal SAM-like domain XI92_34620 PF17841 BID domain of Bartonella effector protein (Bep) XI92_34620 PF02661 Fic/DOC family XI92_34710 PF00437 Type II/IV secretion system protein