locus-tag	class	description
XI92_00025	COG2207	Transcriptional regulator
XI92_00045	COG0737	Belongs to the 5'-nucleotidase family
XI92_00050	COG2267	carboxylic ester hydrolase activity
XI92_00055	COG1335	isochorismatase
XI92_00075	COG0583	DNA-binding transcription factor activity
XI92_00110	COG0598	Magnesium transport protein CorA
XI92_00155	COG0415	Belongs to the DNA photolyase family
XI92_00180	COG0657	acetylesterase activity
XI92_00185	COG0288	reversible hydration of carbon dioxide
XI92_00195	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
XI92_00200	COG5609	conserved protein (DUF2294)
XI92_00205	COG0726	polysaccharide deacetylase
XI92_00215	COG1575	Belongs to the MenA family. Type 1 subfamily
XI92_00225	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_00240	COG0346	lactoylglutathione lyase activity
XI92_00245	COG0640	Transcriptional regulator
XI92_00255	COG2814	Major facilitator Superfamily
XI92_00260	COG1309	transcriptional regulator
XI92_00265	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_00270	COG1522	sequence-specific DNA binding
XI92_00285	COG0346	lactoylglutathione lyase activity
XI92_00360	COG2814	Major facilitator Superfamily
XI92_00380	COG2515	1-aminocyclopropane-1-carboxylate deaminase
XI92_00390	COG1690	Belongs to the RtcB family
XI92_00400	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
XI92_00420	COG0577	efflux transmembrane transporter activity
XI92_00425	COG5002	protein histidine kinase activity
XI92_00425	COG3850	Histidine kinase
XI92_00435	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_00465	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
XI92_00495	COG3831	ATPase activity
XI92_00505	COG3409	Peptidoglycan-binding domain 1 protein
XI92_00505	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_00585	COG2239	Acts as a magnesium transporter
XI92_00590	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_00600	COG0741	lytic transglycosylase activity
XI92_00660	COG2814	Major facilitator Superfamily
XI92_00670	COG1686	Belongs to the peptidase S11 family
XI92_00675	COG0110	maltose O-acetyltransferase activity
XI92_00680	COG0730	response to heat
XI92_00690	COG2801	Transposase and inactivated derivatives
XI92_00695	COG2963	transposase activity
XI92_00700	COG2002	toxin-antitoxin pair type II binding
XI92_00725	COG2195	Cleaves the N-terminal amino acid of tripeptides
XI92_00755	COG1846	Transcriptional regulator
XI92_00760	COG3961	Belongs to the TPP enzyme family
XI92_00765	COG2226	methyltransferase
XI92_00775	COG0500	methyltransferase
XI92_00775	COG3615	Tellurite resistance protein tehB
XI92_00790	COG1309	transcriptional regulator
XI92_00810	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_00830	COG1846	Transcriptional regulator
XI92_00850	COG2971	BadF BadG BcrA BcrD
XI92_00875	COG1649	PFAM Uncharacterised BCR, COG1649
XI92_00900	COG1595	DNA-templated transcription, initiation
XI92_00905	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
XI92_00940	COG1396	sequence-specific DNA binding
XI92_00970	COG1132	(ABC) transporter
XI92_00975	COG1132	(ABC) transporter
XI92_00990	COG2258	MOSC domain
XI92_00995	COG0583	DNA-binding transcription factor activity
XI92_01015	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
XI92_01020	COG0583	DNA-binding transcription factor activity
XI92_01050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_01085	COG1247	-acetyltransferase
XI92_01120	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_01145	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
XI92_01185	COG0028	Belongs to the TPP enzyme family
XI92_01195	COG1136	(ABC) transporter
XI92_01200	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
XI92_01205	COG1187	pseudouridine synthase activity
XI92_01210	COG2329	Antibiotic biosynthesis monooxygenase
XI92_01225	COG1115	amino acid carrier protein
XI92_01235	COG2318	DinB family
XI92_01245	COG0776	regulation of translation
XI92_01260	COG2814	Major facilitator Superfamily
XI92_01265	COG3251	PFAM MbtH domain protein
XI92_01270	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
XI92_01275	COG1535	isochorismatase
XI92_01275	COG3433	isochorismatase activity
XI92_01280	COG1021	2,3-dihydroxybenzoate-AMP ligase
XI92_01285	COG1169	isochorismate synthase
XI92_01290	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_01295	COG2223	nitrite transmembrane transporter activity
XI92_01320	COG0419	ATPase involved in DNA repair
XI92_01325	COG0420	3'-5' exonuclease activity
XI92_01340	COG1024	Enoyl-CoA hydratase
XI92_01345	COG1280	lysine exporter protein (LysE YggA)
XI92_01355	COG2084	Dehydrogenase
XI92_01360	COG1960	acyl-CoA dehydrogenase activity
XI92_01365	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
XI92_01370	COG2079	MmgE PrpD family protein
XI92_01375	COG0372	Belongs to the citrate synthase family
XI92_01380	COG4841	protein insertion into membrane
XI92_01385	COG2814	Major facilitator Superfamily
XI92_01395	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
XI92_01395	COG4499	WXG100 protein secretion system (Wss), protein YukC
XI92_01415	COG0300	oxidoreductase activity
XI92_01495	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
XI92_01500	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
XI92_01505	COG0671	phosphoesterase, PA-phosphatase related
XI92_01515	COG3064	Membrane
XI92_01515	COG4991	sh3 domain protein
XI92_01515	COG0515	serine threonine protein kinase
XI92_01550	COG1509	lysine 2,3-aminomutase activity
XI92_01555	COG3829	transcription factor binding
XI92_01560	COG0456	acetyltransferase
XI92_01565	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
XI92_01570	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
XI92_01575	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
XI92_01580	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
XI92_01595	COG5506	Protein of unknown function (DUF1694)
XI92_01600	COG1012	belongs to the aldehyde dehydrogenase family
XI92_01605	COG1253	flavin adenine dinucleotide binding
XI92_01640	COG1174	glycine betaine transport
XI92_01645	COG0517	IMP dehydrogenase activity
XI92_01645	COG1125	glycine betaine transport
XI92_01680	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
XI92_01705	COG1064	alcohol dehydrogenase
XI92_01710	COG0384	phenazine biosynthesis protein PhzF
XI92_01715	COG1737	Transcriptional regulator
XI92_01720	COG2197	response regulator
XI92_01725	COG4585	Histidine kinase
XI92_01725	COG2203	Gaf domain
XI92_01730	COG0668	transmembrane transport
XI92_01740	COG1335	isochorismatase
XI92_01760	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
XI92_01765	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
XI92_01785	COG0367	asparagine synthase
XI92_01790	COG0071	Belongs to the small heat shock protein (HSP20) family
XI92_01795	COG1999	signal sequence binding
XI92_01805	COG1307	EDD domain protein, DegV family
XI92_01815	COG0805	protein transport
XI92_01825	COG1272	protein, Hemolysin III
XI92_01830	COG0204	Acyl-transferase
XI92_01855	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
XI92_01870	COG0546	phosphoglycolate phosphatase activity
XI92_01880	COG4473	ABC transporter
XI92_01885	COG1131	(ABC) transporter
XI92_01895	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
XI92_01900	COG3655	Transcriptional regulator
XI92_01910	COG0456	acetyltransferase
XI92_01920	COG1794	racemase activity, acting on amino acids and derivatives
XI92_01930	COG2610	gluconate transmembrane transporter activity
XI92_01955	COG0733	neurotransmitter:sodium symporter activity
XI92_01960	COG0017	Asparaginyl-tRNA synthetase
XI92_01970	COG2963	transposase activity
XI92_01975	COG2801	Transposase and inactivated derivatives
XI92_02020	COG0018	arginyl-trna synthetase
XI92_02025	COG2521	methyltransferase
XI92_02025	COG2136	Putative SAM-dependent methyltransferase
XI92_02040	COG1413	lyase activity
XI92_02050	COG0629	single-stranded DNA binding
XI92_02160	COG0488	(ABC) transporter
XI92_02165	COG1418	mRNA catabolic process
XI92_02180	COG0457	Tetratricopeptide repeat
XI92_02205	COG0730	response to heat
XI92_02230	COG2359	stage V sporulation protein S
XI92_02265	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
XI92_02270	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
XI92_02275	COG2146	nitrite reductase [NAD(P)H] activity
XI92_02280	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
XI92_02280	COG1587	Uroporphyrinogen-III synthase
XI92_02290	COG1648	precorrin-2 dehydrogenase activity
XI92_02300	COG2223	nitrite transmembrane transporter activity
XI92_02305	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
XI92_02310	COG0314	molybdopterin synthase activity
XI92_02315	COG0303	'Molybdopterin
XI92_02320	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
XI92_02325	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
XI92_02330	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
XI92_02335	COG2181	nitrate reductase activity
XI92_02340	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
XI92_02345	COG1140	nitrate reductase beta subunit
XI92_02350	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
XI92_02360	COG0714	Associated with various cellular activities
XI92_02365	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
XI92_02370	COG1305	Transglutaminase-like
XI92_02375	COG0386	Belongs to the glutathione peroxidase family
XI92_02390	COG0426	domain, Protein
XI92_02390	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
XI92_02405	COG1595	DNA-templated transcription, initiation
XI92_02415	COG0604	alcohol dehydrogenase
XI92_02425	COG0346	lactoylglutathione lyase activity
XI92_02430	COG1082	Xylose isomerase domain protein TIM barrel
XI92_02450	COG2226	methyltransferase
XI92_02475	COG3874	Sporulation protein YtfJ
XI92_02570	COG4499	WXG100 protein secretion system (Wss), protein YukC
XI92_02605	COG0456	acetyltransferase
XI92_02635	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_02640	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_02645	COG1819	glycosyl
XI92_02655	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
XI92_02720	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_02755	COG3344	reverse transcriptase
XI92_02805	COG0740	serine-type endopeptidase activity
XI92_02815	COG4626	Terminase
XI92_02815	COG1802	Transcriptional regulator
XI92_02865	COG0582	viral genome integration into host DNA
XI92_02940	COG3646	Phage regulatory protein
XI92_02980	COG0860	N-Acetylmuramoyl-L-alanine amidase
XI92_02995	COG2211	Major facilitator Superfamily
XI92_03010	COG1876	peptidase activity
XI92_03020	COG0860	N-Acetylmuramoyl-L-alanine amidase
XI92_03040	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
XI92_03045	COG1114	Component of the transport system for branched-chain amino acids
XI92_03050	COG2963	transposase activity
XI92_03055	COG2801	Transposase and inactivated derivatives
XI92_03070	COG1253	flavin adenine dinucleotide binding
XI92_03075	COG2839	Protein conserved in bacteria
XI92_03080	COG0702	epimerase
XI92_03095	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XI92_03100	COG1607	acyl-coa hydrolase
XI92_03105	COG3689	TIGRFAM TIGR03943 family protein
XI92_03110	COG0701	Predicted permease
XI92_03120	COG2244	polysaccharide biosynthetic process
XI92_03125	COG0586	Pfam SNARE associated Golgi protein
XI92_03130	COG1051	belongs to the nudix hydrolase family
XI92_03135	COG5337	Spore coat protein CotH
XI92_03160	COG4166	transmembrane transport
XI92_03170	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
XI92_03180	COG0702	epimerase
XI92_03190	COG3344	reverse transcriptase
XI92_03210	COG0803	Belongs to the bacterial solute-binding protein 9 family
XI92_03215	COG0456	acetyltransferase
XI92_03220	COG0523	cobalamin synthesis protein
XI92_03230	COG4989	oxidoreductase activity
XI92_03235	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_03240	COG1231	oxidoreductase activity
XI92_03250	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
XI92_03260	COG2801	Transposase and inactivated derivatives
XI92_03275	COG0783	Belongs to the Dps family
XI92_03280	COG3949	Membrane
XI92_03300	COG0840	transmembrane signaling receptor activity
XI92_03325	COG3152	Membrane
XI92_03335	COG2814	Major facilitator Superfamily
XI92_03340	COG0667	Aldo Keto reductase
XI92_03345	COG0640	Transcriptional regulator
XI92_03350	COG1404	Belongs to the peptidase S8 family
XI92_03355	COG2002	toxin-antitoxin pair type II binding
XI92_03360	COG0577	efflux transmembrane transporter activity
XI92_03395	COG1752	Esterase of the alpha-beta hydrolase superfamily
XI92_03405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_03410	COG1279	arginine transmembrane transporter activity
XI92_03415	COG2814	Major facilitator Superfamily
XI92_03425	COG1082	Xylose isomerase domain protein TIM barrel
XI92_03440	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_03480	COG1247	-acetyltransferase
XI92_03485	COG1285	pathogenesis
XI92_03495	COG0726	polysaccharide deacetylase
XI92_03500	COG5002	protein histidine kinase activity
XI92_03505	COG0745	RESPONSE REGULATOR receiver
XI92_03515	COG1316	TRANSCRIPTIONal
XI92_03540	COG0460	homoserine dehydrogenase
XI92_03545	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_03565	COG0726	polysaccharide deacetylase
XI92_03575	COG0300	oxidoreductase activity
XI92_03580	COG5002	protein histidine kinase activity
XI92_03585	COG0745	RESPONSE REGULATOR receiver
XI92_03590	COG1132	(ABC) transporter
XI92_03600	COG0791	NLP P60 protein
XI92_03600	COG1388	LysM domain
XI92_03615	COG1686	Belongs to the peptidase S11 family
XI92_03655	COG1216	Glycosyl transferase, family 2
XI92_03665	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
XI92_03670	COG4988	ABC transporter
XI92_03675	COG1294	oxidase, subunit
XI92_03680	COG1271	oxidase subunit
XI92_03710	COG0583	DNA-binding transcription factor activity
XI92_03730	COG0411	ABC transporter
XI92_03740	COG0523	cobalamin synthesis protein
XI92_03745	COG1231	oxidoreductase activity
XI92_03755	COG0628	permease
XI92_03770	COG0778	Nitroreductase
XI92_03775	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
XI92_03780	COG1959	2 iron, 2 sulfur cluster binding
XI92_03785	COG0583	DNA-binding transcription factor activity
XI92_03790	COG0697	spore germination
XI92_03795	COG4549	nuclear export factor GLE1
XI92_03815	COG1114	Component of the transport system for branched-chain amino acids
XI92_03845	COG2132	Multicopper oxidase
XI92_03855	COG0006	proline dipeptidase activity
XI92_03865	COG4846	Membrane protein involved in cytochrome C biogenesis
XI92_03880	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
XI92_03885	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
XI92_03895	COG2390	Transcriptional regulator
XI92_03900	COG1309	transcriptional regulator
XI92_03935	COG0531	amino acid
XI92_03945	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
XI92_03960	COG1914	H( )-stimulated, divalent metal cation uptake system
XI92_03965	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_03970	COG4166	transmembrane transport
XI92_03990	COG0427	acetyl-CoA hydrolase
XI92_03995	COG3279	Response regulator of the LytR AlgR family
XI92_04005	COG3384	dioxygenase
XI92_04010	COG2814	Major facilitator Superfamily
XI92_04035	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
XI92_04055	COG0028	Belongs to the TPP enzyme family
XI92_04060	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
XI92_04070	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
XI92_04090	COG2323	membrane
XI92_04095	COG5566	PFAM Mor transcription activator
XI92_04100	COG0733	neurotransmitter:sodium symporter activity
XI92_04120	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
XI92_04125	COG2223	nitrite transmembrane transporter activity
XI92_04130	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
XI92_04140	COG0477	Major facilitator Superfamily
XI92_04150	COG1695	Transcriptional regulator
XI92_04165	COG2814	Major facilitator Superfamily
XI92_04205	COG3620	sequence-specific DNA binding
XI92_04235	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
XI92_04240	COG0784	Response regulator, receiver
XI92_04245	COG4191	Histidine kinase
XI92_04250	COG0281	malic enzyme
XI92_04255	COG1027	Aspartate ammonia-lyase
XI92_04270	COG0528	UMP kinase activity
XI92_04275	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XI92_04295	COG1131	(ABC) transporter
XI92_04330	COG2733	membrane
XI92_04350	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
XI92_04370	COG3340	Belongs to the peptidase S51 family
XI92_04375	COG0534	Mate efflux family protein
XI92_04410	COG0789	Transcriptional regulator
XI92_04415	COG1757	Na H antiporter
XI92_04430	COG0701	Predicted permease
XI92_04435	COG0523	cobalamin synthesis protein
XI92_04450	COG1802	Transcriptional regulator
XI92_04480	COG0367	asparagine synthase
XI92_04500	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_04515	COG0406	alpha-ribazole phosphatase activity
XI92_04545	COG1177	transmembrane transport
XI92_04550	COG0725	ABC transporter, periplasmic molybdate-binding protein
XI92_04620	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
XI92_04625	COG4786	Flagellar basal body rod
XI92_04630	COG1419	protein localization to endoplasmic reticulum
XI92_04635	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
XI92_04640	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
XI92_04650	COG1987	bacterial-type flagellum assembly
XI92_04655	COG1338	Plays a role in the flagellum-specific transport system
XI92_04665	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
XI92_04665	COG1776	CheC inhibitor of MCP methylation
XI92_04670	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
XI92_04680	COG0741	lytic transglycosylase activity
XI92_04685	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
XI92_04690	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
XI92_04695	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
XI92_04700	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
XI92_04710	COG0835	chemotaxis
XI92_04710	COG0784	Response regulator, receiver
XI92_04750	COG1157	protein secretion by the type III secretion system
XI92_04760	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
XI92_04765	COG1766	The M ring may be actively involved in energy transduction
XI92_04770	COG1677	Flagellar hook-basal body complex protein FliE
XI92_04775	COG1558	bacterial-type flagellum-dependent cell motility
XI92_04780	COG1815	bacterial-type flagellum-dependent cell motility
XI92_04800	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
XI92_04805	COG1256	bacterial-type flagellum assembly
XI92_04825	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
XI92_04840	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
XI92_04840	COG1776	CheC inhibitor of MCP methylation
XI92_04845	COG2198	Histidine kinase
XI92_04845	COG0643	Histidine kinase
XI92_04850	COG2201	protein-glutamate methylesterase activity
XI92_04855	COG1360	Flagellar Motor Protein
XI92_04860	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
XI92_04870	COG1923	regulation of RNA biosynthetic process
XI92_04910	COG1434	Gram-negative-bacterium-type cell wall biogenesis
XI92_04915	COG2323	membrane
XI92_04925	COG0789	Transcriptional regulator
XI92_04925	COG4978	Transcriptional regulator
XI92_04930	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
XI92_04935	COG0475	glutathione-regulated potassium exporter activity
XI92_04950	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
XI92_04970	COG1280	lysine exporter protein (LysE YggA)
XI92_04975	COG3403	YqcI/YcgG family
XI92_05010	COG0328	RNA-DNA hybrid ribonuclease activity
XI92_05030	COG0454	-acetyltransferase
XI92_05045	COG0438	transferase activity, transferring glycosyl groups
XI92_05050	COG1215	transferase activity, transferring glycosyl groups
XI92_05065	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
XI92_05075	COG3944	biosynthesis protein
XI92_05090	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
XI92_05130	COG0456	acetyltransferase
XI92_05140	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
XI92_05145	COG2311	Membrane
XI92_05150	COG2233	PERMEase
XI92_05160	COG0024	Methionine aminopeptidase
XI92_05170	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
XI92_05175	COG1199	ATP-dependent helicase activity
XI92_05185	COG0116	Belongs to the methyltransferase superfamily
XI92_05235	COG4499	WXG100 protein secretion system (Wss), protein YukC
XI92_05235	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
XI92_05245	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
XI92_05250	COG3935	DnaD domain protein
XI92_05270	COG1199	ATP-dependent helicase activity
XI92_05270	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
XI92_05310	COG0438	transferase activity, transferring glycosyl groups
XI92_05330	COG1694	Mazg nucleotide pyrophosphohydrolase
XI92_05335	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_05345	COG2801	Transposase and inactivated derivatives
XI92_05355	COG2738	Putative neutral zinc metallopeptidase
XI92_05370	COG4347	Protein of unknown function (DUF1405)
XI92_05375	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
XI92_05375	COG2010	Cytochrome c
XI92_05380	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
XI92_05400	COG0457	Tetratricopeptide repeat
XI92_05430	COG0142	geranyltranstransferase activity
XI92_05440	COG0142	geranyltranstransferase activity
XI92_05455	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
XI92_05525	COG0252	asparaginase activity
XI92_05530	COG0492	ferredoxin-NADP+ reductase activity
XI92_05550	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
XI92_05560	COG0789	Transcriptional regulator
XI92_05565	COG1408	metallophosphoesterase
XI92_05575	COG1266	CAAX protease self-immunity
XI92_05580	COG0514	ATP-dependent DNA helicase (RecQ)
XI92_05590	COG1141	Ferredoxin
XI92_05595	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
XI92_05610	COG2096	Adenosyltransferase
XI92_05620	COG0745	RESPONSE REGULATOR receiver
XI92_05625	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
XI92_05630	COG1333	cytochrome c biogenesis protein
XI92_05640	COG1187	pseudouridine synthase activity
XI92_05645	COG0700	Nucleoside recognition
XI92_05650	COG2715	membrane protein required for spore maturation
XI92_05655	COG1686	Belongs to the peptidase S11 family
XI92_05660	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
XI92_05675	COG0392	lysyltransferase activity
XI92_05675	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
XI92_05690	COG5002	protein histidine kinase activity
XI92_05695	COG0582	viral genome integration into host DNA
XI92_05705	COG1801	Protein of unknown function DUF72
XI92_05710	COG3852	Histidine kinase
XI92_05725	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
XI92_05730	COG1392	Phosphate transport regulator
XI92_05735	COG0306	phosphate transporter
XI92_05740	COG0730	response to heat
XI92_05795	COG1114	Component of the transport system for branched-chain amino acids
XI92_05805	COG2197	response regulator
XI92_05810	COG4585	Histidine kinase
XI92_05815	COG4758	membrane
XI92_05830	COG1757	Na H antiporter
XI92_05850	COG0733	neurotransmitter:sodium symporter activity
XI92_05860	COG1648	precorrin-2 dehydrogenase activity
XI92_05880	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
XI92_05885	COG0529	Catalyzes the synthesis of activated sulfate
XI92_05905	COG0019	diaminopimelate decarboxylase activity
XI92_05915	COG1368	sulfuric ester hydrolase activity
XI92_05920	COG1183	phosphatidylcholine synthase activity
XI92_05935	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
XI92_06010	COG0440	acetolactate synthase activity
XI92_06015	COG0028	Belongs to the TPP enzyme family
XI92_06020	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
XI92_06050	COG3874	Sporulation protein YtfJ
XI92_06055	COG4709	membrane
XI92_06060	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
XI92_06065	COG1301	dicarboxylic acid transport
XI92_06075	COG1846	Transcriptional regulator
XI92_06125	COG0716	FMN binding
XI92_06150	COG1696	Membrane protein involved in D-alanine export
XI92_06160	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
XI92_06165	COG2070	2-Nitropropane dioxygenase
XI92_06170	COG1619	proteins homologs of microcin C7 resistance protein MccF
XI92_06180	COG1335	isochorismatase
XI92_06190	COG1522	sequence-specific DNA binding
XI92_06210	COG1131	(ABC) transporter
XI92_06220	COG1131	(ABC) transporter
XI92_06225	COG1725	Transcriptional regulator
XI92_06240	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
XI92_06245	COG1780	Probably involved in ribonucleotide reductase function
XI92_06285	COG4873	Protein conserved in bacteria
XI92_06300	COG0720	synthase
XI92_06310	COG5002	protein histidine kinase activity
XI92_06320	COG2318	DinB family
XI92_06330	COG1846	Transcriptional regulator
XI92_06335	COG3852	Histidine kinase
XI92_06345	COG2861	carbohydrate metabolic process
XI92_06355	COG0235	Class ii aldolase
XI92_06370	COG1349	DNA-binding transcription factor activity
XI92_06395	COG3842	ATPase activity
XI92_06400	COG1840	ABC-type Fe3 transport system, periplasmic component
XI92_06415	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
XI92_06425	COG3243	poly(R)-hydroxyalkanoic acid synthase
XI92_06430	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_06450	COG2030	dehydratase
XI92_06460	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
XI92_06465	COG0861	Integral membrane protein TerC family
XI92_06470	COG2116	formate transmembrane transporter activity
XI92_06480	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
XI92_06500	COG2186	Transcriptional regulator
XI92_06505	COG5002	protein histidine kinase activity
XI92_06510	COG0745	RESPONSE REGULATOR receiver
XI92_06520	COG3835	regulator
XI92_06525	COG0277	FAD linked oxidase domain protein
XI92_06530	COG0247	lactate metabolic process
XI92_06535	COG2340	Cysteine-rich secretory protein family
XI92_06545	COG0564	pseudouridine synthase activity
XI92_06555	COG2409	Drug exporters of the RND superfamily
XI92_06565	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
XI92_06570	COG1177	transmembrane transport
XI92_06575	COG1176	ABC-type spermidine putrescine transport system, permease component I
XI92_06585	COG1012	belongs to the aldehyde dehydrogenase family
XI92_06620	COG0681	Belongs to the peptidase S26 family
XI92_06625	COG1686	Belongs to the peptidase S11 family
XI92_06635	COG2226	methyltransferase
XI92_06655	COG1668	transmembrane transport
XI92_06660	COG4152	abc transporter atp-binding protein
XI92_06675	COG2801	Transposase and inactivated derivatives
XI92_06710	COG1476	TRANSCRIPTIONal
XI92_06720	COG0508	dehydrogenase complex catalyzes the overall conversion of
XI92_06740	COG2226	methyltransferase
XI92_06745	COG2801	Transposase and inactivated derivatives
XI92_06790	COG5634	Uncharacterized conserved protein (DUF2278)
XI92_06795	COG1620	l-lactate permease
XI92_06830	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
XI92_06830	COG0512	Glutamine amidotransferase of anthranilate synthase
XI92_06845	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
XI92_06870	COG2382	esterase
XI92_06880	COG2153	protein acetylation
XI92_06925	COG1091	dTDP-4-dehydrorhamnose reductase activity
XI92_06940	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
XI92_06960	COG0463	Glycosyl transferase, family 2
XI92_06960	COG0457	Tetratricopeptide repeat
XI92_06980	COG1216	Glycosyl transferase, family 2
XI92_06985	COG0772	Belongs to the SEDS family
XI92_07000	COG0564	pseudouridine synthase activity
XI92_07010	COG2357	RelA SpoT domain protein
XI92_07020	COG4116	CYTH
XI92_07025	COG2346	COG2346, Truncated hemoglobins
XI92_07040	COG1164	Oligoendopeptidase f
XI92_07050	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XI92_07060	COG0861	Integral membrane protein TerC family
XI92_07065	COG1393	Belongs to the ArsC family
XI92_07080	COG4166	transmembrane transport
XI92_07090	COG4608	Belongs to the ABC transporter superfamily
XI92_07095	COG0444	Belongs to the ABC transporter superfamily
XI92_07100	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
XI92_07105	COG0601	transmembrane transport
XI92_07110	COG4166	transmembrane transport
XI92_07125	COG0180	Tryptophanyl-tRNA synthetase
XI92_07140	COG5504	Zn-dependent protease
XI92_07145	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
XI92_07150	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
XI92_07190	COG0561	phosphatase activity
XI92_07205	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_07230	COG2996	Protein conserved in bacteria
XI92_07250	COG0004	ammonium transporteR
XI92_07255	COG3339	Conserved Protein
XI92_07280	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
XI92_07290	COG0753	catalase activity
XI92_07300	COG0367	asparagine synthase
XI92_07325	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_07325	COG3409	Peptidoglycan-binding domain 1 protein
XI92_07325	COG1388	LysM domain
XI92_07330	COG4824	toxin secretion phage lysis holin
XI92_07400	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_07435	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_07455	COG3331	DNA recombination
XI92_07550	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
XI92_07565	COG0367	asparagine synthase
XI92_07590	COG0179	Fumarylacetoacetate (FAA) hydrolase
XI92_07650	COG0398	Pfam SNARE associated Golgi protein
XI92_07670	COG1278	Cold shock
XI92_07685	COG2224	Isocitrate lyase
XI92_07690	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
XI92_07700	COG3693	PFAM glycoside hydrolase, family 10
XI92_07705	COG0840	transmembrane signaling receptor activity
XI92_07710	COG0501	Belongs to the peptidase M48B family
XI92_07730	COG0745	RESPONSE REGULATOR receiver
XI92_07745	COG2207	Transcriptional regulator
XI92_07745	COG3708	Transcriptional regulator
XI92_07750	COG1595	DNA-templated transcription, initiation
XI92_07760	COG1078	dGTPase activity
XI92_07765	COG1408	metallophosphoesterase
XI92_07770	COG1073	alpha beta
XI92_07860	COG4208	sulfate ABC transporter
XI92_07870	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
XI92_07880	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_07895	COG0095	Lipoate-protein ligase
XI92_07900	COG1234	tRNA 3'-trailer cleavage
XI92_07910	COG1609	Transcriptional regulator
XI92_07915	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_07945	COG1511	domain protein
XI92_07945	COG1511	domain protein
XI92_07950	COG1309	transcriptional regulator
XI92_08000	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
XI92_08005	COG2329	Antibiotic biosynthesis monooxygenase
XI92_08010	COG3428	Bacterial PH domain
XI92_08015	COG3402	PFAM membrane-flanked domain
XI92_08020	COG0697	spore germination
XI92_08055	COG3428	Bacterial PH domain
XI92_08060	COG3402	PFAM membrane-flanked domain
XI92_08070	COG1309	transcriptional regulator
XI92_08080	COG4473	ABC transporter
XI92_08085	COG1131	(ABC) transporter
XI92_08090	COG0537	adenosine 5'-monophosphoramidase activity
XI92_08095	COG4980	gas vesicle protein
XI92_08125	COG3973	AAA domain
XI92_08130	COG0772	Belongs to the SEDS family
XI92_08140	COG1595	DNA-templated transcription, initiation
XI92_08155	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
XI92_08165	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
XI92_08170	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
XI92_08175	COG3620	sequence-specific DNA binding
XI92_08180	COG2140	Oxalate decarboxylase
XI92_08205	COG0457	Tetratricopeptide repeat
XI92_08210	COG0346	lactoylglutathione lyase activity
XI92_08215	COG0346	lactoylglutathione lyase activity
XI92_08240	COG4717	serine-type aminopeptidase activity
XI92_08245	COG0420	3'-5' exonuclease activity
XI92_08265	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
XI92_08275	COG2186	Transcriptional regulator
XI92_08315	COG2205	protein histidine kinase activity
XI92_08315	COG5002	protein histidine kinase activity
XI92_08315	COG0784	Response regulator, receiver
XI92_08320	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
XI92_08325	COG2208	phosphoserine phosphatase activity
XI92_08335	COG1191	sigma factor activity
XI92_08405	COG2373	Large extracellular alpha-helical protein
XI92_08455	COG2376	Dihydroxyacetone kinase
XI92_08465	COG2376	Dihydroxyacetone kinase
XI92_08490	COG0640	Transcriptional regulator
XI92_08495	COG2814	Major facilitator Superfamily
XI92_08500	COG2801	Transposase and inactivated derivatives
XI92_08515	COG1183	phosphatidylcholine synthase activity
XI92_08570	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
XI92_08585	COG1522	sequence-specific DNA binding
XI92_08590	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
XI92_08620	COG1073	alpha beta
XI92_08635	COG3344	reverse transcriptase
XI92_08660	COG2020	methyltransferase activity
XI92_08705	COG2801	Transposase and inactivated derivatives
XI92_08735	COG0477	Major facilitator Superfamily
XI92_08745	COG1842	Phage shock protein A
XI92_08755	COG1288	antiporter activity
XI92_08760	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
XI92_08785	COG0305	Participates in initiation and elongation during chromosome replication
XI92_08800	COG0305	Participates in initiation and elongation during chromosome replication
XI92_08815	COG0494	nUDIX hydrolase
XI92_08820	COG3181	Tripartite tricarboxylate transporter family receptor
XI92_08825	COG4565	transcriptional regulatory protein
XI92_08830	COG3290	protein histidine kinase activity
XI92_08835	COG0477	Major facilitator Superfamily
XI92_08915	COG2801	Transposase and inactivated derivatives
XI92_08935	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_08950	COG4608	Belongs to the ABC transporter superfamily
XI92_08955	COG0444	Belongs to the ABC transporter superfamily
XI92_08960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
XI92_08965	COG0601	transmembrane transport
XI92_09005	COG1363	Peptidase, m42
XI92_09025	COG1024	Enoyl-CoA hydratase
XI92_09045	COG2244	polysaccharide biosynthetic process
XI92_09050	COG0659	secondary active sulfate transmembrane transporter activity
XI92_09065	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_09070	COG0635	Involved in the biosynthesis of porphyrin-containing compound
XI92_09075	COG3409	Peptidoglycan-binding domain 1 protein
XI92_09075	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_09085	COG0561	phosphatase activity
XI92_09100	COG3527	Alpha-acetolactate decarboxylase
XI92_09105	COG0028	Belongs to the TPP enzyme family
XI92_09135	COG0189	ligase activity
XI92_09150	COG1126	abc transporter atp-binding protein
XI92_09155	COG0765	amino acid transport
XI92_09160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
XI92_09165	COG1132	(ABC) transporter
XI92_09170	COG1132	(ABC) transporter
XI92_09180	COG1012	belongs to the aldehyde dehydrogenase family
XI92_09195	COG0531	amino acid
XI92_09210	COG0693	protein deglycase activity
XI92_09220	COG2211	Major facilitator Superfamily
XI92_09225	COG4533	DNA binding
XI92_09240	COG1733	regulation of RNA biosynthetic process
XI92_09245	COG2814	Major facilitator Superfamily
XI92_09250	COG1309	transcriptional regulator
XI92_09260	COG2076	Multidrug Resistance protein
XI92_09270	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_09275	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
XI92_09275	COG0165	Argininosuccinate lyase
XI92_09280	COG1522	sequence-specific DNA binding
XI92_09300	COG2259	Doxx family
XI92_09310	COG1263	PTS System
XI92_09310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
XI92_09320	COG1737	Transcriptional regulator
XI92_09330	COG0475	glutathione-regulated potassium exporter activity
XI92_09335	COG0531	amino acid
XI92_09370	COG0586	Pfam SNARE associated Golgi protein
XI92_09405	COG3546	catalase activity
XI92_09410	COG1114	Component of the transport system for branched-chain amino acids
XI92_09425	COG5522	Integral membrane protein (intg_mem_TP0381)
XI92_09435	COG1136	(ABC) transporter
XI92_09440	COG0577	efflux transmembrane transporter activity
XI92_09445	COG1388	LysM domain
XI92_09445	COG3584	3D domain protein
XI92_09470	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
XI92_09475	COG1447	Phosphotransferase system cellobiose-specific component IIA
XI92_09480	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
XI92_09480	COG3711	transcriptional antiterminator
XI92_09495	COG1283	sodium-dependent phosphate transmembrane transporter activity
XI92_09500	COG0604	alcohol dehydrogenase
XI92_09505	COG1316	TRANSCRIPTIONal
XI92_09515	COG0730	response to heat
XI92_09520	COG2210	Belongs to the sulfur carrier protein TusA family
XI92_09535	COG0425	Belongs to the sulfur carrier protein TusA family
XI92_09540	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_09540	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
XI92_09545	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
XI92_09545	COG0425	Belongs to the sulfur carrier protein TusA family
XI92_09550	COG1937	Protein conserved in bacteria
XI92_09555	COG0446	pyridine nucleotide-disulphide oxidoreductase
XI92_09565	COG3591	Belongs to the peptidase S1B family
XI92_09575	COG2719	SpoVR family
XI92_09580	COG0778	Nitroreductase
XI92_09595	COG2801	Transposase and inactivated derivatives
XI92_09650	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_09655	COG2252	PERMEase
XI92_09665	COG1136	(ABC) transporter
XI92_09690	COG1846	Transcriptional regulator
XI92_09695	COG2814	Major facilitator Superfamily
XI92_09700	COG2205	protein histidine kinase activity
XI92_09740	COG0351	phosphomethylpyrimidine kinase
XI92_09745	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
XI92_09755	COG2104	thiamine diphosphate biosynthetic process
XI92_09760	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
XI92_09765	COG0352	thiamine-phosphate diphosphorylase activity
XI92_09770	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
XI92_09775	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
XI92_09780	COG1116	anion transmembrane transporter activity
XI92_09785	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
XI92_09810	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
XI92_09930	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
XI92_09935	COG0581	inorganic phosphate transmembrane transporter activity
XI92_09940	COG0573	inorganic phosphate transmembrane transporter activity
XI92_09945	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
XI92_09950	COG1918	ferrous iron import across plasma membrane
XI92_09950	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
XI92_09955	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
XI92_09960	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
XI92_09975	COG0531	amino acid
XI92_09980	COG0697	spore germination
XI92_09985	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
XI92_10000	COG4990	cell redox homeostasis
XI92_10005	COG0833	amino acid
XI92_10015	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
XI92_10020	COG1845	cytochrome c oxidase, subunit III
XI92_10030	COG0475	glutathione-regulated potassium exporter activity
XI92_10030	COG0569	domain protein
XI92_10040	COG2153	protein acetylation
XI92_10055	COG2252	PERMEase
XI92_10060	COG1113	amino acid transport
XI92_10075	COG1114	Component of the transport system for branched-chain amino acids
XI92_10080	COG3104	oligopeptide transport
XI92_10100	COG1476	TRANSCRIPTIONal
XI92_10105	COG3583	domain protein
XI92_10105	COG3584	3D domain protein
XI92_10110	COG0840	transmembrane signaling receptor activity
XI92_10155	COG1674	ftsk spoiiie
XI92_10245	COG0740	serine-type endopeptidase activity
XI92_10255	COG4626	Terminase
XI92_10255	COG1802	Transcriptional regulator
XI92_10305	COG0582	viral genome integration into host DNA
XI92_10395	COG1396	sequence-specific DNA binding
XI92_10425	COG2801	Transposase and inactivated derivatives
XI92_10435	COG1063	alcohol dehydrogenase
XI92_10465	COG1879	ABC-type sugar transport system periplasmic component
XI92_10470	COG1172	Belongs to the binding-protein-dependent transport system permease family
XI92_10485	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
XI92_10490	COG1609	Transcriptional regulator
XI92_10495	COG0477	Major facilitator Superfamily
XI92_10500	COG1846	Transcriptional regulator
XI92_10505	COG2271	Major facilitator Superfamily
XI92_10535	COG5002	protein histidine kinase activity
XI92_10545	COG2378	regulation of single-species biofilm formation
XI92_10555	COG1595	DNA-templated transcription, initiation
XI92_10570	COG0833	amino acid
XI92_10575	COG0765	amino acid transport
XI92_10580	COG0765	amino acid transport
XI92_10585	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
XI92_10590	COG1126	abc transporter atp-binding protein
XI92_10600	COG1115	amino acid carrier protein
XI92_10605	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
XI92_10610	COG0697	spore germination
XI92_10625	COG0366	Alpha amylase catalytic
XI92_10630	COG1263	PTS System
XI92_10630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
XI92_10635	COG2188	Transcriptional regulator
XI92_10640	COG0531	amino acid
XI92_10660	COG0714	Associated with various cellular activities
XI92_10665	COG4548	von Willebrand factor, type A
XI92_10675	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
XI92_10685	COG2226	methyltransferase
XI92_10695	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_10700	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_10705	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
XI92_10710	COG3104	oligopeptide transport
XI92_10735	COG1620	l-lactate permease
XI92_10740	COG1027	Aspartate ammonia-lyase
XI92_10745	COG1253	flavin adenine dinucleotide binding
XI92_10750	COG0346	lactoylglutathione lyase activity
XI92_10760	COG3344	reverse transcriptase
XI92_10775	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
XI92_10780	COG1316	TRANSCRIPTIONal
XI92_10785	COG2720	vancomycin resistance protein
XI92_10805	COG3227	Zinc metalloprotease (Elastase)
XI92_10820	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
XI92_10825	COG2217	Heavy metal translocating P-type atpase
XI92_10830	COG0640	Transcriptional regulator
XI92_10840	COG0531	amino acid
XI92_10855	COG2427	Protein of unknown function (DUF1641)
XI92_10860	COG3383	formate dehydrogenase (NAD+) activity
XI92_10865	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
XI92_10870	COG0454	-acetyltransferase
XI92_10870	COG0456	acetyltransferase
XI92_10885	COG0745	RESPONSE REGULATOR receiver
XI92_10890	COG5002	protein histidine kinase activity
XI92_10900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_10905	COG0697	spore germination
XI92_10915	COG0281	malic enzyme
XI92_10925	COG4565	transcriptional regulatory protein
XI92_10930	COG3290	protein histidine kinase activity
XI92_10940	COG4990	cell redox homeostasis
XI92_10950	COG5002	protein histidine kinase activity
XI92_10955	COG0745	RESPONSE REGULATOR receiver
XI92_10960	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
XI92_10970	COG0395	ABC-type sugar transport system, permease component
XI92_10975	COG1175	transmembrane transport
XI92_10980	COG3842	ATPase activity
XI92_10985	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
XI92_11010	COG2851	Citrate transporter
XI92_11015	COG4565	transcriptional regulatory protein
XI92_11020	COG3290	protein histidine kinase activity
XI92_11030	COG2268	Band 7 protein
XI92_11035	COG1585	Membrane protein implicated in regulation of membrane protease activity
XI92_11045	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
XI92_11065	COG2766	serine protein kinase
XI92_11075	COG5001	Diguanylate cyclase
XI92_11075	COG1716	ATPase activity
XI92_11105	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
XI92_11225	COG0735	belongs to the Fur family
XI92_11230	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
XI92_11250	COG4555	ABC transporter
XI92_11260	COG0069	glutamate synthase activity
XI92_11260	COG0067	glutamate synthase
XI92_11260	COG0070	glutamate synthase
XI92_11265	COG4129	membrane
XI92_11270	COG1132	(ABC) transporter
XI92_11295	COG1194	a g-specific adenine glycosylase
XI92_11300	COG1988	membrane-bound metal-dependent
XI92_11330	COG1090	epimerase
XI92_11335	COG1228	amidohydrolase
XI92_11355	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
XI92_11375	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
XI92_11375	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
XI92_11385	COG0463	Glycosyl transferase, family 2
XI92_11400	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
XI92_11405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
XI92_11405	COG1263	PTS System
XI92_11440	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
XI92_11445	COG0833	amino acid
XI92_11455	COG3829	transcription factor binding
XI92_11470	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
XI92_11475	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
XI92_11495	COG0535	radical SAM domain protein
XI92_11505	COG0387	Pfam Sodium calcium exchanger
XI92_11510	COG3871	stress protein (general stress protein 26)
XI92_11525	COG0586	Pfam SNARE associated Golgi protein
XI92_11550	COG2217	Heavy metal translocating P-type atpase
XI92_11555	COG1295	ribonuclease BN
XI92_11565	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
XI92_11580	COG3853	Toxic anion resistance protein (TelA)
XI92_11590	COG0861	Integral membrane protein TerC family
XI92_11595	COG2310	stress, protein
XI92_11600	COG2310	stress, protein
XI92_11605	COG2310	stress, protein
XI92_11635	COG2270	Major facilitator Superfamily
XI92_11680	COG1116	anion transmembrane transporter activity
XI92_11690	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
XI92_11710	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
XI92_11740	COG2190	(PTS) system
XI92_11740	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
XI92_11740	COG1263	PTS System
XI92_11745	COG0366	Alpha amylase catalytic
XI92_11770	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
XI92_11775	COG0549	Belongs to the carbamate kinase family
XI92_11800	COG0840	transmembrane signaling receptor activity
XI92_11810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
XI92_11815	COG0765	amino acid transport
XI92_11840	COG2814	Major facilitator Superfamily
XI92_11865	COG5002	protein histidine kinase activity
XI92_11890	COG0166	Belongs to the GPI family
XI92_11915	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
XI92_11920	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_11925	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_11930	COG0235	Class ii aldolase
XI92_11940	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
XI92_11945	COG0450	alkyl hydroperoxide reductase
XI92_11960	COG1473	amidohydrolase
XI92_11990	COG4807	Protein conserved in bacteria
XI92_11995	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
XI92_12020	COG0730	response to heat
XI92_12105	COG0740	serine-type endopeptidase activity
XI92_12110	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_12120	COG1802	Transcriptional regulator
XI92_12120	COG4626	Terminase
XI92_12160	COG0582	viral genome integration into host DNA
XI92_12255	COG2002	toxin-antitoxin pair type II binding
XI92_12265	COG1484	DNA-dependent DNA replication
XI92_12310	COG0582	viral genome integration into host DNA
XI92_12320	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
XI92_12335	COG2309	aminopeptidase activity
XI92_12345	COG2076	Multidrug Resistance protein
XI92_12350	COG1012	belongs to the aldehyde dehydrogenase family
XI92_12360	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
XI92_12370	COG1597	lipid kinase activity
XI92_12390	COG4682	membrane
XI92_12395	COG1846	Transcriptional regulator
XI92_12400	COG0003	Pfam Anion-transporting ATPase
XI92_12415	COG1464	Belongs to the NlpA lipoprotein family
XI92_12420	COG2011	ABC-type metal ion transport system permease component
XI92_12430	COG1335	isochorismatase
XI92_12445	COG4851	CamS sex pheromone cAM373 precursor
XI92_12455	COG0210	DNA helicase
XI92_12485	COG0151	Belongs to the GarS family
XI92_12495	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
XI92_12505	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
XI92_12520	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
XI92_12530	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
XI92_12535	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
XI92_12540	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
XI92_12565	COG1216	Glycosyl transferase, family 2
XI92_12565	COG0463	Glycosyl transferase, family 2
XI92_12575	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
XI92_12625	COG0745	RESPONSE REGULATOR receiver
XI92_12630	COG2205	protein histidine kinase activity
XI92_12670	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
XI92_12695	COG5002	protein histidine kinase activity
XI92_12705	COG2252	PERMEase
XI92_12715	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
XI92_12740	COG4824	toxin secretion phage lysis holin
XI92_12840	COG0582	viral genome integration into host DNA
XI92_12975	COG0582	viral genome integration into host DNA
XI92_13035	COG3378	Phage plasmid primase P4 family
XI92_13055	COG0582	viral genome integration into host DNA
XI92_13070	COG1266	CAAX protease self-immunity
XI92_13085	COG0488	(ABC) transporter
XI92_13095	COG0456	acetyltransferase
XI92_13100	COG1214	PFAM Peptidase M22, glycoprotease
XI92_13105	COG0802	atpase or kinase
XI92_13205	COG2183	response to ionizing radiation
XI92_13210	COG2337	Toxic component of a toxin-antitoxin (TA) module
XI92_13215	COG0864	Transcriptional regulator
XI92_13220	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
XI92_13225	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
XI92_13235	COG0705	Rhomboid family
XI92_13240	COG4294	response to UV
XI92_13250	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
XI92_13260	COG2814	Major facilitator Superfamily
XI92_13275	COG0179	Fumarylacetoacetate (FAA) hydrolase
XI92_13280	COG3185	4-Hydroxyphenylpyruvate dioxygenase
XI92_13310	COG0561	phosphatase activity
XI92_13320	COG2801	Transposase and inactivated derivatives
XI92_13325	COG4608	Belongs to the ABC transporter superfamily
XI92_13330	COG0444	Belongs to the ABC transporter superfamily
XI92_13350	COG3344	reverse transcriptase
XI92_13370	COG0747	negative chemotaxis
XI92_13380	COG0488	(ABC) transporter
XI92_13405	COG5298	Protein conserved in bacteria
XI92_13425	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_13435	COG1609	Transcriptional regulator
XI92_13445	COG0204	Acyl-transferase
XI92_13460	COG0697	spore germination
XI92_13480	COG1910	domain protein
XI92_13485	COG0725	ABC transporter, periplasmic molybdate-binding protein
XI92_13490	COG4149	molybdate abc transporter
XI92_13505	COG0656	L-ascorbic acid biosynthetic process
XI92_13515	COG4166	transmembrane transport
XI92_13520	COG4166	transmembrane transport
XI92_13535	COG2207	Transcriptional regulator
XI92_13550	COG2814	Major facilitator Superfamily
XI92_13560	COG2271	Major facilitator Superfamily
XI92_13565	COG0277	FAD linked oxidase domain protein
XI92_13575	COG0604	alcohol dehydrogenase
XI92_13580	COG1464	Belongs to the NlpA lipoprotein family
XI92_13585	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
XI92_13590	COG2011	ABC-type metal ion transport system permease component
XI92_13595	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_13630	COG4856	YbbR-like protein
XI92_13715	COG0726	polysaccharide deacetylase
XI92_13720	COG2194	sulfuric ester hydrolase activity
XI92_13730	COG0489	protein tyrosine kinase activity
XI92_13735	COG0860	N-Acetylmuramoyl-L-alanine amidase
XI92_13760	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
XI92_13795	COG0257	Belongs to the bacterial ribosomal protein bL36 family
XI92_13805	COG0024	Methionine aminopeptidase
XI92_13815	COG0201	protein transport
XI92_13840	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
XI92_13945	COG1358	cellular component organization or biogenesis
XI92_13960	COG2813	Specifically methylates the guanine in position
XI92_13985	COG0250	Participates in transcription elongation, termination and antitermination
XI92_13990	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
XI92_13995	COG0267	Belongs to the bacterial ribosomal protein bL33 family
XI92_14005	COG3688	RNA-binding protein containing a PIN domain
XI92_14010	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
XI92_14025	COG1045	serine acetyltransferase
XI92_14045	COG4956	integral membrane protein (PIN domain superfamily)
XI92_14055	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
XI92_14060	COG0542	response to heat
XI92_14070	COG3880	PFAM UvrB UvrC protein
XI92_14160	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
XI92_14165	COG1396	sequence-specific DNA binding
XI92_14170	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
XI92_14175	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
XI92_14180	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
XI92_14185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
XI92_14190	COG0512	Glutamine amidotransferase of anthranilate synthase
XI92_14195	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
XI92_14200	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
XI92_14215	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
XI92_14230	COG2208	phosphoserine phosphatase activity
XI92_14245	COG1098	S1 RNA binding domain
XI92_14265	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
XI92_14270	COG3956	TIGRFAM MazG family protein
XI92_14275	COG2244	polysaccharide biosynthetic process
XI92_14280	COG2002	toxin-antitoxin pair type II binding
XI92_14285	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
XI92_14300	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
XI92_14315	COG0251	oxidation-reduction process
XI92_14320	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
XI92_14335	COG4466	Protein conserved in bacteria
XI92_14355	COG0084	hydrolase, TatD family'
XI92_14365	COG2002	toxin-antitoxin pair type II binding
XI92_14370	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
XI92_14380	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
XI92_14390	COG1774	PSP1 C-terminal conserved region
XI92_14395	COG0470	DNA polymerase III
XI92_14405	COG1982	Orn Lys Arg decarboxylase major
XI92_14460	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
XI92_14465	COG0590	tRNA wobble adenosine to inosine editing
XI92_14475	COG1335	isochorismatase
XI92_14480	COG1428	Deoxynucleoside kinase
XI92_14485	COG1428	Deoxynucleoside kinase
XI92_14515	COG1686	Belongs to the peptidase S11 family
XI92_14520	COG0516	GMP reductase activity
XI92_14520	COG0517	IMP dehydrogenase activity
XI92_14555	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
XI92_14560	COG0187	DNA topoisomerase II activity
XI92_14570	COG2501	S4 domain
XI92_14575	COG0592	DNA-directed DNA polymerase activity
XI92_14600	COG1847	R3H domain protein
XI92_14625	COG1192	Involved in chromosome partitioning
XI92_14630	COG1475	DNA binding
XI92_14640	COG0668	transmembrane transport
XI92_14645	COG4481	Protein conserved in bacteria
XI92_14650	COG0012	GTP binding
XI92_14670	COG4241	membrane
XI92_14675	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
XI92_14685	COG0305	Participates in initiation and elongation during chromosome replication
XI92_14715	COG0745	RESPONSE REGULATOR receiver
XI92_14720	COG5002	protein histidine kinase activity
XI92_14730	COG4853	Protein conserved in bacteria
XI92_14735	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
XI92_14740	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
XI92_14755	COG5002	protein histidine kinase activity
XI92_14795	COG3344	reverse transcriptase
XI92_14815	COG1272	protein, Hemolysin III
XI92_14820	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
XI92_14840	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
XI92_14845	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
XI92_14850	COG2814	Major facilitator Superfamily
XI92_14855	COG3275	phosphorelay sensor kinase activity
XI92_14875	COG0628	permease
XI92_14880	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
XI92_14880	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
XI92_14885	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
XI92_14890	COG1309	transcriptional regulator
XI92_14895	COG0488	(ABC) transporter
XI92_14900	COG0463	Glycosyl transferase, family 2
XI92_14905	COG4485	Bacterial membrane protein, YfhO
XI92_14915	COG1216	Glycosyl transferase, family 2
XI92_14930	COG1216	Glycosyl transferase, family 2
XI92_14935	COG1607	acyl-coa hydrolase
XI92_14945	COG0840	transmembrane signaling receptor activity
XI92_14960	COG0438	transferase activity, transferring glycosyl groups
XI92_14970	COG0477	Major facilitator Superfamily
XI92_14975	COG3279	Response regulator of the LytR AlgR family
XI92_14980	COG1966	Carbon starvation protein
XI92_14985	COG2879	small protein
XI92_14990	COG3706	GGDEF domain
XI92_14995	COG0351	phosphomethylpyrimidine kinase
XI92_15000	COG2203	Gaf domain
XI92_15000	COG4585	Histidine kinase
XI92_15005	COG2197	response regulator
XI92_15015	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
XI92_15020	COG1011	Hydrolase
XI92_15040	COG0460	homoserine dehydrogenase
XI92_15050	COG1609	Transcriptional regulator
XI92_15055	COG2755	lipolytic protein G-D-S-L family
XI92_15060	COG1131	(ABC) transporter
XI92_15065	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
XI92_15075	COG2814	Major facilitator Superfamily
XI92_15080	COG0561	phosphatase activity
XI92_15085	COG2233	PERMEase
XI92_15090	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
XI92_15100	COG2363	Small membrane protein
XI92_15110	COG3773	Cell wall hydrolase
XI92_15125	COG0280	phosphate acetyltransferase
XI92_15145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_15150	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_15155	COG1120	ATPase activity
XI92_15160	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
XI92_15165	COG1078	dGTPase activity
XI92_15175	COG1994	Peptidase M50
XI92_15185	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
XI92_15190	COG0584	glycerophosphoryl diester phosphodiesterase
XI92_15195	COG0789	Transcriptional regulator
XI92_15200	COG2814	Major facilitator Superfamily
XI92_15205	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
XI92_15230	COG1619	proteins homologs of microcin C7 resistance protein MccF
XI92_15235	COG4506	Protein conserved in bacteria
XI92_15245	COG1595	DNA-templated transcription, initiation
XI92_15270	COG2801	Transposase and inactivated derivatives
XI92_15275	COG2234	aminopeptidase activity
XI92_15285	COG0024	Methionine aminopeptidase
XI92_15290	COG1131	(ABC) transporter
XI92_15295	COG0842	Transport permease protein
XI92_15300	COG4585	Histidine kinase
XI92_15305	COG2197	response regulator
XI92_15310	COG3227	Zinc metalloprotease (Elastase)
XI92_15325	COG5001	Diguanylate cyclase
XI92_15325	COG3300	MHYT domain
XI92_15345	COG3344	reverse transcriptase
XI92_15360	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
XI92_15365	COG2181	nitrate reductase activity
XI92_15365	COG0247	lactate metabolic process
XI92_15370	COG0183	Belongs to the thiolase family
XI92_15375	COG1250	3-hydroxyacyl-CoA dehydrogenase
XI92_15380	COG1960	acyl-CoA dehydrogenase activity
XI92_15385	COG1960	acyl-CoA dehydrogenase activity
XI92_15395	COG3343	RNA polymerase activity
XI92_15405	COG4821	SIS domain
XI92_15425	COG1494	fructose-1,6-bisphosphatase
XI92_15430	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
XI92_15465	COG0009	L-threonylcarbamoyladenylate synthase
XI92_15485	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
XI92_15490	COG2259	Doxx family
XI92_15505	COG0698	ribose 5-phosphate isomerase
XI92_15540	COG0356	it plays a direct role in the translocation of protons across the membrane
XI92_15605	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
XI92_15625	COG0839	Belongs to the complex I subunit 6 family
XI92_15635	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
XI92_15640	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
XI92_15645	COG1007	ATP synthesis coupled electron transport
XI92_15650	COG4836	Membrane
XI92_15665	COG2385	sporulation resulting in formation of a cellular spore
XI92_15670	COG3279	Response regulator of the LytR AlgR family
XI92_15685	COG0739	heme binding
XI92_15695	COG1609	Transcriptional regulator
XI92_15710	COG0489	protein tyrosine kinase activity
XI92_15715	COG3944	biosynthesis protein
XI92_15720	COG0489	protein tyrosine kinase activity
XI92_15725	COG4464	protein tyrosine phosphatase activity
XI92_15730	COG1210	Utp--glucose-1-phosphate uridylyltransferase
XI92_15745	COG1216	Glycosyl transferase, family 2
XI92_15755	COG0438	transferase activity, transferring glycosyl groups
XI92_15760	COG0463	Glycosyl transferase, family 2
XI92_15765	COG1215	transferase activity, transferring glycosyl groups
XI92_15770	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
XI92_15775	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
XI92_15790	COG0745	RESPONSE REGULATOR receiver
XI92_15795	COG5002	protein histidine kinase activity
XI92_15820	COG1136	(ABC) transporter
XI92_15825	COG0577	efflux transmembrane transporter activity
XI92_15835	COG1191	sigma factor activity
XI92_15865	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
XI92_15870	COG4715	Zinc finger, swim domain protein
XI92_15895	COG1388	LysM domain
XI92_15895	COG3584	3D domain protein
XI92_15900	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
XI92_15910	COG1215	transferase activity, transferring glycosyl groups
XI92_15920	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
XI92_15925	COG1388	LysM domain
XI92_15925	COG0791	NLP P60 protein
XI92_15935	COG1368	sulfuric ester hydrolase activity
XI92_15945	COG2389	metal-binding protein
XI92_15960	COG1620	l-lactate permease
XI92_15970	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
XI92_15975	COG1294	oxidase, subunit
XI92_15980	COG1271	oxidase subunit
XI92_15990	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
XI92_15995	COG0583	DNA-binding transcription factor activity
XI92_16000	COG1511	domain protein
XI92_16015	COG1301	dicarboxylic acid transport
XI92_16020	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
XI92_16030	COG1447	Phosphotransferase system cellobiose-specific component IIA
XI92_16040	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
XI92_16045	COG1447	Phosphotransferase system cellobiose-specific component IIA
XI92_16050	COG1486	melibiose metabolic process
XI92_16070	COG3933	PFAM sigma-54 factor interaction domain-containing protein
XI92_16070	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
XI92_16080	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
XI92_16085	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
XI92_16090	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
XI92_16095	COG1316	TRANSCRIPTIONal
XI92_16100	COG1739	Uncharacterized protein family UPF0029
XI92_16105	COG1307	EDD domain protein, DegV family
XI92_16110	COG1733	regulation of RNA biosynthetic process
XI92_16115	COG0791	NLP P60 protein
XI92_16115	COG1388	LysM domain
XI92_16125	COG1040	competence protein
XI92_16130	COG1278	Cold shock
XI92_16135	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
XI92_16165	COG1131	(ABC) transporter
XI92_16180	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
XI92_16195	COG2884	Cell division ATP-binding protein ftsE
XI92_16200	COG2177	Part of the ABC transporter FtsEX involved in
XI92_16205	COG3409	Peptidoglycan-binding domain 1 protein
XI92_16205	COG0793	Belongs to the peptidase S41A family
XI92_16210	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
XI92_16215	COG1132	(ABC) transporter
XI92_16230	COG0655	NAD(P)H dehydrogenase (quinone) activity
XI92_16240	COG0583	DNA-binding transcription factor activity
XI92_16260	COG0789	Transcriptional regulator
XI92_16275	COG0556	nucleotide-excision repair
XI92_16280	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
XI92_16290	COG1950	PFAM Membrane protein of
XI92_16310	COG0110	maltose O-acetyltransferase activity
XI92_16315	COG0457	Tetratricopeptide repeat
XI92_16320	COG0492	ferredoxin-NADP+ reductase activity
XI92_16330	COG1051	belongs to the nudix hydrolase family
XI92_16340	COG0391	Required for morphogenesis under gluconeogenic growth conditions
XI92_16350	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
XI92_16360	COG2323	membrane
XI92_16375	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
XI92_16400	COG0582	viral genome integration into host DNA
XI92_16425	COG3646	Phage regulatory protein
XI92_16505	COG3331	DNA recombination
XI92_16640	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_16645	COG4824	toxin secretion phage lysis holin
XI92_16650	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_16655	COG1388	LysM domain
XI92_16655	COG3409	Peptidoglycan-binding domain 1 protein
XI92_16655	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_16660	COG0457	Tetratricopeptide repeat
XI92_16690	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
XI92_16705	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
XI92_16740	COG1346	cytolysis
XI92_16745	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
XI92_16750	COG1647	Serine aminopeptidase, S33
XI92_16755	COG0557	exoribonuclease II activity
XI92_16780	COG3344	reverse transcriptase
XI92_16795	COG0745	RESPONSE REGULATOR receiver
XI92_16840	COG3223	Belongs to the PsiE family
XI92_16845	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_16850	COG0488	(ABC) transporter
XI92_16905	COG1252	NADH dehydrogenase
XI92_16915	COG1733	regulation of RNA biosynthetic process
XI92_16920	COG2814	Major facilitator Superfamily
XI92_16925	COG0656	L-ascorbic acid biosynthetic process
XI92_16940	COG2910	NAD(P)H-binding
XI92_16945	COG1115	amino acid carrier protein
XI92_16950	COG1115	amino acid carrier protein
XI92_16955	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
XI92_16970	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
XI92_16975	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
XI92_16985	COG1528	Iron-storage protein
XI92_16995	COG1611	Belongs to the LOG family
XI92_17010	COG0783	Belongs to the Dps family
XI92_17015	COG1115	amino acid carrier protein
XI92_17025	COG0490	domain, Protein
XI92_17030	COG0475	glutathione-regulated potassium exporter activity
XI92_17035	COG0586	Pfam SNARE associated Golgi protein
XI92_17055	COG3227	Zinc metalloprotease (Elastase)
XI92_17060	COG2151	metal-sulfur cluster biosynthetic enzyme
XI92_17065	COG0840	transmembrane signaling receptor activity
XI92_17095	COG5002	protein histidine kinase activity
XI92_17100	COG0745	RESPONSE REGULATOR receiver
XI92_17105	COG1376	ErfK ybiS ycfS ynhG family protein
XI92_17115	COG0586	Pfam SNARE associated Golgi protein
XI92_17150	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_17170	COG0531	amino acid
XI92_17175	COG2814	Major facilitator Superfamily
XI92_17190	COG0840	transmembrane signaling receptor activity
XI92_17195	COG0011	TIGRFAM Protein of
XI92_17210	COG1686	Belongs to the peptidase S11 family
XI92_17220	COG1250	3-hydroxyacyl-CoA dehydrogenase
XI92_17220	COG1024	Enoyl-CoA hydratase
XI92_17225	COG0183	Belongs to the thiolase family
XI92_17230	COG1960	acyl-CoA dehydrogenase activity
XI92_17235	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_17240	COG1309	transcriptional regulator
XI92_17255	COG0039	L-malate dehydrogenase activity
XI92_17275	COG1393	Belongs to the ArsC family
XI92_17285	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
XI92_17290	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
XI92_17305	COG2011	ABC-type metal ion transport system permease component
XI92_17310	COG1464	Belongs to the NlpA lipoprotein family
XI92_17315	COG1464	Belongs to the NlpA lipoprotein family
XI92_17320	COG0396	ATPase activity
XI92_17325	COG0719	Fe-S assembly protein
XI92_17330	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
XI92_17335	COG0822	iron-sulfur transferase activity
XI92_17340	COG0719	Fe-S assembly protein
XI92_17345	COG0737	Belongs to the 5'-nucleotidase family
XI92_17350	COG3377	Domain of unknown function (DUF1805)
XI92_17360	COG0739	heme binding
XI92_17385	COG4377	Putative membrane peptidase family (DUF2324)
XI92_17390	COG0789	Transcriptional regulator
XI92_17400	COG4470	Protein conserved in bacteria
XI92_17425	COG1494	fructose-1,6-bisphosphatase
XI92_17430	COG2445	Protein of unknown function DUF86
XI92_17440	COG0647	UMP catabolic process
XI92_17445	COG2249	NAD(P)H dehydrogenase (quinone) activity
XI92_17455	COG1358	cellular component organization or biogenesis
XI92_17475	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
XI92_17480	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
XI92_17490	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
XI92_17540	COG2824	Alkylphosphonate utilization operon protein PhnA
XI92_17545	COG0390	transport system, permease component
XI92_17550	COG2274	protein secretion by the type I secretion system
XI92_17560	COG1252	NADH dehydrogenase
XI92_17575	COG0316	Belongs to the HesB IscA family
XI92_17580	COG2801	Transposase and inactivated derivatives
XI92_17585	COG2963	transposase activity
XI92_17620	COG1396	sequence-specific DNA binding
XI92_17710	COG0582	viral genome integration into host DNA
XI92_17760	COG1802	Transcriptional regulator
XI92_17760	COG4626	Terminase
XI92_17770	COG0740	serine-type endopeptidase activity
XI92_17830	COG4824	toxin secretion phage lysis holin
XI92_17835	COG3409	Peptidoglycan-binding domain 1 protein
XI92_17835	COG1388	LysM domain
XI92_17835	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_17895	COG1683	Conserved Protein
XI92_17910	COG3708	Transcriptional regulator
XI92_17925	COG1252	NADH dehydrogenase
XI92_17940	COG3584	3D domain protein
XI92_17955	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
XI92_17960	COG1210	Utp--glucose-1-phosphate uridylyltransferase
XI92_17965	COG1268	BioY protein
XI92_17975	COG2050	protein possibly involved in aromatic compounds catabolism
XI92_17980	COG2801	Transposase and inactivated derivatives
XI92_17990	COG0423	glycine-tRNA ligase activity
XI92_18005	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
XI92_18010	COG5018	Exonuclease
XI92_18030	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
XI92_18040	COG2267	carboxylic ester hydrolase activity
XI92_18045	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
XI92_18050	COG1522	sequence-specific DNA binding
XI92_18055	COG0436	Aminotransferase
XI92_18060	COG1098	S1 RNA binding domain
XI92_18065	COG2155	Conserved Protein
XI92_18085	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
XI92_18090	COG1285	pathogenesis
XI92_18125	COG0544	peptidyl-prolyl cis-trans isomerase activity
XI92_18220	COG0039	L-malate dehydrogenase activity
XI92_18245	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
XI92_18255	COG0058	SHG alpha-glucan phosphorylase activity
XI92_18285	COG1278	Cold shock
XI92_18290	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
XI92_18295	COG1575	Belongs to the MenA family. Type 1 subfamily
XI92_18300	COG1169	isochorismate synthase
XI92_18310	COG0596	Alpha beta hydrolase
XI92_18315	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
XI92_18335	COG4948	Mandelate Racemase Muconate Lactonizing
XI92_18355	COG3964	amidohydrolase
XI92_18380	COG2801	Transposase and inactivated derivatives
XI92_18410	COG0577	efflux transmembrane transporter activity
XI92_18415	COG1136	(ABC) transporter
XI92_18420	COG0577	efflux transmembrane transporter activity
XI92_18425	COG0577	efflux transmembrane transporter activity
XI92_18430	COG2205	protein histidine kinase activity
XI92_18435	COG0745	RESPONSE REGULATOR receiver
XI92_18440	COG0640	Transcriptional regulator
XI92_18445	COG5658	integral membrane protein
XI92_18455	COG3708	Transcriptional regulator
XI92_18455	COG2207	Transcriptional regulator
XI92_18460	COG1136	(ABC) transporter
XI92_18465	COG0577	efflux transmembrane transporter activity
XI92_18475	COG0586	Pfam SNARE associated Golgi protein
XI92_18500	COG1597	lipid kinase activity
XI92_18530	COG0745	RESPONSE REGULATOR receiver
XI92_18535	COG5002	protein histidine kinase activity
XI92_18565	COG1842	Phage shock protein A
XI92_18590	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_18605	COG1294	oxidase, subunit
XI92_18610	COG1271	oxidase subunit
XI92_18615	COG0288	reversible hydration of carbon dioxide
XI92_18655	COG0494	nUDIX hydrolase
XI92_18675	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
XI92_18680	COG1116	anion transmembrane transporter activity
XI92_18685	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
XI92_18705	COG1368	sulfuric ester hydrolase activity
XI92_18710	COG2267	carboxylic ester hydrolase activity
XI92_18720	COG3852	Histidine kinase
XI92_18725	COG5002	protein histidine kinase activity
XI92_18735	COG1349	DNA-binding transcription factor activity
XI92_18785	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_18810	COG0438	transferase activity, transferring glycosyl groups
XI92_18815	COG0671	phosphoesterase, PA-phosphatase related
XI92_18820	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
XI92_18825	COG2267	carboxylic ester hydrolase activity
XI92_18845	COG1794	racemase activity, acting on amino acids and derivatives
XI92_18850	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
XI92_18855	COG1242	4 iron, 4 sulfur cluster binding
XI92_18875	COG1136	(ABC) transporter
XI92_18885	COG0582	viral genome integration into host DNA
XI92_18890	COG0490	domain, Protein
XI92_18895	COG0475	glutathione-regulated potassium exporter activity
XI92_18900	COG2814	Major facilitator Superfamily
XI92_18960	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
XI92_18980	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
XI92_18985	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
XI92_18995	COG0303	'Molybdopterin
XI92_19000	COG1763	Mo-molybdopterin cofactor biosynthetic process
XI92_19005	COG0314	molybdopterin synthase activity
XI92_19030	COG1329	Transcriptional regulator
XI92_19055	COG3832	glyoxalase III activity
XI92_19065	COG2814	Major facilitator Superfamily
XI92_19070	COG2081	HI0933 family
XI92_19075	COG2244	polysaccharide biosynthetic process
XI92_19080	COG1187	pseudouridine synthase activity
XI92_19085	COG1349	DNA-binding transcription factor activity
XI92_19090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
XI92_19100	COG1523	belongs to the glycosyl hydrolase 13 family
XI92_19105	COG0510	thiamine kinase activity
XI92_19120	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_19130	COG1363	Peptidase, m42
XI92_19135	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
XI92_19140	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
XI92_19150	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
XI92_19165	COG1674	ftsk spoiiie
XI92_19180	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_19195	COG2309	aminopeptidase activity
XI92_19205	COG3118	belongs to the thioredoxin family
XI92_19210	COG4851	CamS sex pheromone cAM373 precursor
XI92_19215	COG1605	Chorismate mutase
XI92_19215	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
XI92_19225	COG1609	Transcriptional regulator
XI92_19260	COG3279	Response regulator of the LytR AlgR family
XI92_19280	COG2972	Histidine kinase
XI92_19280	COG0745	RESPONSE REGULATOR receiver
XI92_19285	COG0666	response to abiotic stimulus
XI92_19295	COG0745	RESPONSE REGULATOR receiver
XI92_19310	COG0123	including yeast histone deacetylase and acetoin utilization protein
XI92_19315	COG0517	IMP dehydrogenase activity
XI92_19320	COG0454	-acetyltransferase
XI92_19325	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
XI92_19330	COG0110	maltose O-acetyltransferase activity
XI92_19340	COG1595	DNA-templated transcription, initiation
XI92_19380	COG0626	cystathionine gamma-synthase activity
XI92_19385	COG1956	GAF domain-containing protein
XI92_19390	COG1309	transcriptional regulator
XI92_19395	COG0697	spore germination
XI92_19400	COG0583	DNA-binding transcription factor activity
XI92_19410	COG1104	cysteine desulfurase activity
XI92_19425	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
XI92_19435	COG1574	metal-dependent hydrolase with the TIM-barrel fold
XI92_19450	COG3874	Sporulation protein YtfJ
XI92_19455	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
XI92_19460	COG0827	DNA restriction-modification system
XI92_19485	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_19530	COG0589	response to stress
XI92_19535	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_19550	COG0662	Cupin 2, conserved barrel domain protein
XI92_19585	COG0006	proline dipeptidase activity
XI92_19600	COG4109	DRTGG domain
XI92_19615	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
XI92_19630	COG0587	DNA-directed DNA polymerase activity
XI92_19635	COG0281	malic enzyme
XI92_19640	COG1725	Transcriptional regulator
XI92_19665	COG3030	protein affecting phage T7 exclusion by the F plasmid
XI92_19670	COG0628	permease
XI92_19685	COG0372	Belongs to the citrate synthase family
XI92_19690	COG0538	isocitrate dehydrogenase activity
XI92_19710	COG0745	RESPONSE REGULATOR receiver
XI92_19715	COG5002	protein histidine kinase activity
XI92_19720	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
XI92_19720	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
XI92_19730	COG1971	Probably functions as a manganese efflux pump
XI92_19740	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
XI92_19745	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
XI92_19755	COG3611	Membrane attachment protein
XI92_19760	COG1484	DNA-dependent DNA replication
XI92_19775	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
XI92_19800	COG1363	Peptidase, m42
XI92_19805	COG1309	transcriptional regulator
XI92_19810	COG1566	PFAM secretion protein HlyD family protein
XI92_19815	COG2814	Major facilitator Superfamily
XI92_19835	COG1418	mRNA catabolic process
XI92_19845	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
XI92_19890	COG1286	toxin biosynthetic process
XI92_19895	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
XI92_19895	COG1796	DNA polymerase
XI92_19910	COG1187	pseudouridine synthase activity
XI92_19915	COG1114	Component of the transport system for branched-chain amino acids
XI92_19920	COG5386	Cell surface protein
XI92_19930	COG5386	Cell surface protein
XI92_19945	COG1120	ATPase activity
XI92_19950	COG4509	Sortase family
XI92_19960	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
XI92_19965	COG4895	conserved protein (DUF2196)
XI92_19975	COG0745	RESPONSE REGULATOR receiver
XI92_19980	COG2205	protein histidine kinase activity
XI92_19985	COG1131	(ABC) transporter
XI92_20015	COG2318	DinB family
XI92_20040	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_20045	COG1309	transcriptional regulator
XI92_20050	COG1024	Enoyl-CoA hydratase
XI92_20055	COG2086	electron transfer activity
XI92_20060	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
XI92_20065	COG3118	belongs to the thioredoxin family
XI92_20075	COG1719	4-vinyl reductase, 4VR
XI92_20080	COG2009	succinate dehydrogenase
XI92_20085	COG1053	succinate dehydrogenase
XI92_20090	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
XI92_20095	COG0824	Thioesterase
XI92_20100	COG1876	peptidase activity
XI92_20105	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
XI92_20110	COG1360	Flagellar Motor Protein
XI92_20115	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
XI92_20120	COG4152	abc transporter atp-binding protein
XI92_20125	COG1668	transmembrane transport
XI92_20130	COG1959	2 iron, 2 sulfur cluster binding
XI92_20140	COG0697	spore germination
XI92_20145	COG1396	sequence-specific DNA binding
XI92_20150	COG1983	PspC domain protein
XI92_20155	COG0402	S-adenosylhomocysteine deaminase activity
XI92_20160	COG2233	PERMEase
XI92_20165	COG2197	response regulator
XI92_20185	COG5401	PFAM Sporulation and spore germination
XI92_20195	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
XI92_20200	COG0622	Phosphoesterase
XI92_20245	COG1067	ATP-dependent peptidase activity
XI92_20245	COG0470	DNA polymerase III
XI92_20260	COG1764	response to oxidative stress
XI92_20265	COG1846	Transcriptional regulator
XI92_20275	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
XI92_20285	COG1587	Uroporphyrinogen-III synthase
XI92_20290	COG0113	porphobilinogen synthase activity
XI92_20300	COG1388	LysM domain
XI92_20315	COG0285	dihydrofolate synthase activity
XI92_20335	COG1077	Cell shape determining protein MreB Mrl
XI92_20340	COG1792	Involved in formation and maintenance of cell shape
XI92_20355	COG2894	cell division
XI92_20360	COG0739	heme binding
XI92_20365	COG1994	Peptidase M50
XI92_20370	COG1530	ribonuclease E activity
XI92_20380	COG2868	ribosomal protein
XI92_20390	COG3290	protein histidine kinase activity
XI92_20400	COG0745	RESPONSE REGULATOR receiver
XI92_20405	COG5002	protein histidine kinase activity
XI92_20410	COG1136	(ABC) transporter
XI92_20415	COG0577	efflux transmembrane transporter activity
XI92_20420	COG0577	efflux transmembrane transporter activity
XI92_20425	COG0077	Prephenate dehydratase
XI92_20430	COG2258	MOSC domain
XI92_20435	COG1827	regulation of RNA biosynthetic process
XI92_20440	COG1104	cysteine desulfurase activity
XI92_20445	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
XI92_20450	COG0157	Belongs to the NadC ModD family
XI92_20480	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
XI92_20510	COG1862	Preprotein translocase
XI92_20520	COG2323	membrane
XI92_20525	COG2244	polysaccharide biosynthetic process
XI92_20535	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
XI92_20535	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
XI92_20540	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
XI92_20545	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
XI92_20545	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
XI92_20555	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
XI92_20580	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
XI92_20595	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
XI92_20600	COG1959	2 iron, 2 sulfur cluster binding
XI92_20605	COG1104	cysteine desulfurase activity
XI92_20620	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
XI92_20640	COG0628	permease
XI92_20670	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
XI92_20705	COG0768	penicillin binding
XI92_20730	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
XI92_20735	COG0626	cystathionine gamma-synthase activity
XI92_20740	COG1454	alcohol dehydrogenase
XI92_20740	COG1012	belongs to the aldehyde dehydrogenase family
XI92_20750	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
XI92_20790	COG2259	Doxx family
XI92_20795	COG2514	catechol 2,3-dioxygenase activity
XI92_20805	COG3186	Phenylalanine-4-hydroxylase
XI92_20855	COG2267	carboxylic ester hydrolase activity
XI92_20865	COG1785	Belongs to the alkaline phosphatase family
XI92_20875	COG2357	RelA SpoT domain protein
XI92_20880	COG0778	Nitroreductase
XI92_20890	COG1595	DNA-templated transcription, initiation
XI92_20900	COG1191	sigma factor activity
XI92_20915	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
XI92_20920	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
XI92_20930	COG1534	Rna-binding protein
XI92_20940	COG1713	HD superfamily hydrolase involved in NAD metabolism
XI92_20945	COG0799	negative regulation of ribosome biogenesis
XI92_20950	COG2226	methyltransferase
XI92_20955	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
XI92_20960	COG1555	photosystem II stabilization
XI92_20960	COG1596	polysaccharide export
XI92_20965	COG2131	deaminase
XI92_20970	COG0658	competence protein
XI92_20970	COG2333	competence protein COMEC
XI92_20980	COG1466	dna polymerase III delta subunit
XI92_21005	COG1733	regulation of RNA biosynthetic process
XI92_21010	COG0635	Involved in the biosynthesis of porphyrin-containing compound
XI92_21040	COG1385	rRNA (uridine-N3-)-methyltransferase activity
XI92_21045	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
XI92_21055	COG1610	YqeY-like protein
XI92_21080	COG1480	7TM receptor with intracellular HD hydrolase
XI92_21090	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
XI92_21095	COG0295	cytidine deaminase activity
XI92_21100	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
XI92_21115	COG0517	IMP dehydrogenase activity
XI92_21130	COG0358	DNA primase activity
XI92_21135	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
XI92_21145	COG2384	SAM-dependent methyltransferase
XI92_21150	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
XI92_21180	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_21185	COG1121	(ABC) transporter
XI92_21190	COG1108	ABC-type Mn2 Zn2 transport systems permease components
XI92_21195	COG0735	belongs to the Fur family
XI92_21210	COG5521	maltodextrose utilization protein MalA
XI92_21220	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
XI92_21225	COG0477	Major facilitator Superfamily
XI92_21235	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
XI92_21240	COG0573	inorganic phosphate transmembrane transporter activity
XI92_21245	COG0573	inorganic phosphate transmembrane transporter activity
XI92_21255	COG0704	Plays a role in the regulation of phosphate uptake
XI92_21260	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
XI92_21270	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
XI92_21275	COG4483	Protein conserved in bacteria
XI92_21280	COG1940	carbohydrate kinase activity
XI92_21290	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_21310	COG0626	cystathionine gamma-synthase activity
XI92_21315	COG0626	cystathionine gamma-synthase activity
XI92_21325	COG0646	methionine synthase
XI92_21325	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
XI92_21330	COG1410	methionine synthase
XI92_21330	COG0646	methionine synthase
XI92_21385	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
XI92_21390	COG1459	type II secretion system
XI92_21455	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
XI92_21485	COG1725	Transcriptional regulator
XI92_21490	COG1131	(ABC) transporter
XI92_21525	COG2076	Multidrug Resistance protein
XI92_21530	COG2076	Multidrug Resistance protein
XI92_21540	COG1609	Transcriptional regulator
XI92_21550	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
XI92_21585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
XI92_21595	COG3872	metal-dependent enzyme
XI92_21610	COG0006	proline dipeptidase activity
XI92_21635	COG3854	ATPases associated with a variety of cellular activities
XI92_21680	COG0511	ligase activity, forming carbon-carbon bonds
XI92_21685	COG0439	Biotin carboxylase
XI92_21690	COG1302	Protein conserved in bacteria
XI92_21715	COG0142	geranyltranstransferase activity
XI92_21725	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
XI92_21735	COG0497	DNA recombination
XI92_21740	COG0750	zinc metalloprotease
XI92_21760	COG3093	addiction module antidote protein HigA
XI92_21765	COG0584	glycerophosphoryl diester phosphodiesterase
XI92_21775	COG3290	protein histidine kinase activity
XI92_21775	COG3829	transcription factor binding
XI92_21785	COG0280	phosphate acetyltransferase
XI92_21790	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
XI92_21800	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
XI92_21805	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
XI92_21810	COG0022	dehydrogenase e1 component
XI92_21815	COG0508	dehydrogenase complex catalyzes the overall conversion of
XI92_21825	COG0772	Belongs to the SEDS family
XI92_21830	COG2323	membrane
XI92_21850	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
XI92_21855	COG0765	amino acid transport
XI92_21860	COG1126	abc transporter atp-binding protein
XI92_21865	COG4129	membrane
XI92_21870	COG1376	ErfK ybiS ycfS ynhG family protein
XI92_21885	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_21890	COG2195	Cleaves the N-terminal amino acid of tripeptides
XI92_21900	COG1285	pathogenesis
XI92_21935	COG1760	l-serine dehydratase
XI92_21940	COG1760	l-serine dehydratase
XI92_21945	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
XI92_21950	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_21955	COG0300	oxidoreductase activity
XI92_22000	COG1522	sequence-specific DNA binding
XI92_22010	COG0737	Belongs to the 5'-nucleotidase family
XI92_22025	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
XI92_22040	COG2226	methyltransferase
XI92_22040	COG1073	alpha beta
XI92_22070	COG0307	riboflavin synthase, alpha
XI92_22075	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
XI92_22075	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
XI92_22090	COG1073	alpha beta
XI92_22095	COG0456	acetyltransferase
XI92_22100	COG1609	Transcriptional regulator
XI92_22105	COG2056	Na+-H+ antiporter family
XI92_22110	COG0596	Alpha beta hydrolase
XI92_22120	COG4085	toxin activity
XI92_22120	COG1525	nuclease
XI92_22120	COG0737	Belongs to the 5'-nucleotidase family
XI92_22130	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
XI92_22130	COG0456	acetyltransferase
XI92_22135	COG0656	L-ascorbic acid biosynthetic process
XI92_22140	COG0667	Aldo Keto reductase
XI92_22160	COG1300	Membrane
XI92_22165	COG0735	belongs to the Fur family
XI92_22175	COG4974	Belongs to the 'phage' integrase family
XI92_22200	COG0598	Magnesium transport protein CorA
XI92_22215	COG1846	Transcriptional regulator
XI92_22230	COG1131	(ABC) transporter
XI92_22235	COG1725	Transcriptional regulator
XI92_22240	COG1686	Belongs to the peptidase S11 family
XI92_22285	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
XI92_22300	COG0697	spore germination
XI92_22305	COG0561	phosphatase activity
XI92_22310	COG4086	secreted protein
XI92_22320	COG0456	acetyltransferase
XI92_22325	COG1547	Domain of unknown function (DUF309)
XI92_22355	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
XI92_22375	COG3711	transcriptional antiterminator
XI92_22380	COG1263	PTS System
XI92_22380	COG2190	(PTS) system
XI92_22380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
XI92_22405	COG0778	Nitroreductase
XI92_22410	COG2203	Gaf domain
XI92_22410	COG2199	diguanylate cyclase activity
XI92_22420	COG2084	Dehydrogenase
XI92_22455	COG0436	Aminotransferase
XI92_22460	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
XI92_22490	COG0640	Transcriptional regulator
XI92_22495	COG1012	belongs to the aldehyde dehydrogenase family
XI92_22520	COG4974	Belongs to the 'phage' integrase family
XI92_22540	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_22545	COG1695	Transcriptional regulator
XI92_22580	COG0183	Belongs to the thiolase family
XI92_22615	COG3842	ATPase activity
XI92_22620	COG0366	Alpha amylase catalytic
XI92_22630	COG2182	Extracellular solute-binding protein
XI92_22635	COG1175	transmembrane transport
XI92_22640	COG3833	ABC-type maltose transport systems, permease component
XI92_22645	COG1609	Transcriptional regulator
XI92_22650	COG0436	Aminotransferase
XI92_22660	COG2205	protein histidine kinase activity
XI92_22670	COG3209	COG3209 Rhs family protein
XI92_22695	COG2814	Major facilitator Superfamily
XI92_22740	COG1408	metallophosphoesterase
XI92_22745	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_22750	COG2200	EAL domain
XI92_22765	COG4703	Protein of unknown function (DUF1797)
XI92_22775	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
XI92_22785	COG0517	IMP dehydrogenase activity
XI92_22790	COG0583	DNA-binding transcription factor activity
XI92_22810	COG0569	domain protein
XI92_22815	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
XI92_22825	COG0561	phosphatase activity
XI92_22840	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
XI92_22845	COG0022	dehydrogenase e1 component
XI92_22890	COG1982	Orn Lys Arg decarboxylase major
XI92_22910	COG0483	inositol monophosphate 1-phosphatase activity
XI92_22935	COG4896	Protein conserved in bacteria
XI92_22945	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
XI92_22950	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
XI92_22960	COG0772	Belongs to the SEDS family
XI92_22965	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
XI92_23000	COG3336	cytochrome c oxidase
XI92_23015	COG2340	Cysteine-rich secretory protein family
XI92_23030	COG0406	alpha-ribazole phosphatase activity
XI92_23035	COG3679	Belongs to the UPF0342 family
XI92_23050	COG0742	ribosomal rna small subunit methyltransferase
XI92_23060	COG3314	Sporulation integral membrane protein YlbJ
XI92_23065	COG1752	Esterase of the alpha-beta hydrolase superfamily
XI92_23070	COG3480	Lon protease (S16) C-terminal proteolytic domain
XI92_23080	COG1399	metal-binding, possibly nucleic acid-binding protein
XI92_23100	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
XI92_23125	COG0768	penicillin binding
XI92_23145	COG0772	Belongs to the SEDS family
XI92_23165	COG0849	cell division
XI92_23170	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
XI92_23180	COG1191	sigma factor activity
XI92_23185	COG1191	sigma factor activity
XI92_23190	COG1873	PFAM PRC-barrel domain
XI92_23200	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
XI92_23210	COG0762	integral membrane protein
XI92_23215	COG2302	S4 RNA-binding domain
XI92_23220	COG3599	regulation of cell shape
XI92_23240	COG0564	pseudouridine synthase activity
XI92_23325	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
XI92_23330	COG1561	YicC-like family, N-terminal region
XI92_23350	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
XI92_23355	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
XI92_23370	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
XI92_23370	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
XI92_23380	COG0631	protein serine/threonine phosphatase activity
XI92_23385	COG0515	serine threonine protein kinase
XI92_23385	COG2815	serine threonine protein kinase
XI92_23395	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
XI92_23400	COG1564	THIamine pyrophosphokinase
XI92_23415	COG1302	Protein conserved in bacteria
XI92_23420	COG1461	Dihydroxyacetone kinase
XI92_23425	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
XI92_23440	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
XI92_23445	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_23460	COG1196	nuclear chromosome segregation
XI92_23465	COG3344	reverse transcriptase
XI92_23470	COG1196	nuclear chromosome segregation
XI92_23475	COG0552	protein localization to endoplasmic reticulum
XI92_23485	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
XI92_23495	COG1837	Belongs to the UPF0109 family
XI92_23535	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
XI92_23540	COG0758	DNA mediated transformation
XI92_23545	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
XI92_23555	COG4974	Belongs to the 'phage' integrase family
XI92_23600	COG4589	Belongs to the CDS family
XI92_23610	COG0750	zinc metalloprotease
XI92_23630	COG0195	Participates in both transcription termination and antitermination
XI92_23635	COG2740	Nucleic-acid-binding protein implicated in transcription termination
XI92_23640	COG1358	cellular component organization or biogenesis
XI92_23650	COG1550	Protein conserved in bacteria
XI92_23665	COG0196	riboflavin kinase activity
XI92_23680	COG0726	polysaccharide deacetylase
XI92_23685	COG0612	Peptidase, M16
XI92_23690	COG1873	PFAM PRC-barrel domain
XI92_23695	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
XI92_23700	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
XI92_23705	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
XI92_23710	COG0527	aspartate kinase activity
XI92_23725	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
XI92_23730	COG0740	serine-type endopeptidase activity
XI92_23745	COG2188	Transcriptional regulator
XI92_23770	COG0612	Peptidase, M16
XI92_23775	COG0612	Peptidase, M16
XI92_23780	COG0300	oxidoreductase activity
XI92_23800	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
XI92_23820	COG1692	metallophosphoesterase
XI92_23825	COG2359	stage V sporulation protein S
XI92_23835	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
XI92_23835	COG0674	pyruvate-flavodoxin oxidoreductase activity
XI92_23840	COG1013	pyruvate-flavodoxin oxidoreductase activity
XI92_23850	COG4550	Control of competence regulator ComK, YlbF/YmcA
XI92_23875	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
XI92_23880	COG1368	sulfuric ester hydrolase activity
XI92_23890	COG3773	Cell wall hydrolase
XI92_23895	COG1404	Belongs to the peptidase S8 family
XI92_23900	COG0823	Involved in the tonB-independent uptake of proteins
XI92_23905	COG2723	6-phospho-beta-galactosidase activity
XI92_23910	COG2188	Transcriptional regulator
XI92_23920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_23930	COG1346	cytolysis
XI92_23950	COG1086	Polysaccharide biosynthesis protein
XI92_23970	COG5001	Diguanylate cyclase
XI92_23970	COG3300	MHYT domain
XI92_23975	COG2267	carboxylic ester hydrolase activity
XI92_23995	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
XI92_24000	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
XI92_24005	COG2169	Transcriptional regulator
XI92_24010	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
XI92_24015	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_24020	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_24025	COG1120	ATPase activity
XI92_24030	COG2819	hydrolase of the alpha beta superfamily
XI92_24040	COG1937	Protein conserved in bacteria
XI92_24045	COG2608	mercury ion transmembrane transporter activity
XI92_24050	COG2217	Heavy metal translocating P-type atpase
XI92_24065	COG2116	formate transmembrane transporter activity
XI92_24070	COG1408	metallophosphoesterase
XI92_24080	COG1113	amino acid transport
XI92_24095	COG2322	membrane
XI92_24100	COG1979	alcohol dehydrogenase
XI92_24105	COG1349	DNA-binding transcription factor activity
XI92_24110	COG1105	Belongs to the carbohydrate kinase PfkB family
XI92_24115	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
XI92_24115	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
XI92_24115	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
XI92_24120	COG1388	LysM domain
XI92_24120	COG3584	3D domain protein
XI92_24150	COG0464	growth
XI92_24160	COG2860	membrane
XI92_24165	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
XI92_24170	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
XI92_24175	COG0789	Transcriptional regulator
XI92_24180	COG0174	glutamine synthetase
XI92_24185	COG1695	Transcriptional regulator
XI92_24205	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
XI92_24225	COG0737	Belongs to the 5'-nucleotidase family
XI92_24230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
XI92_24265	COG1132	(ABC) transporter
XI92_24270	COG1132	(ABC) transporter
XI92_24295	COG0730	response to heat
XI92_24310	COG1346	cytolysis
XI92_24320	COG0583	DNA-binding transcription factor activity
XI92_24345	COG2801	Transposase and inactivated derivatives
XI92_24350	COG2963	transposase activity
XI92_24365	COG0785	Cytochrome C biogenesis protein
XI92_24370	COG4846	Membrane protein involved in cytochrome C biogenesis
XI92_24400	COG2226	methyltransferase
XI92_24425	COG0010	Belongs to the arginase family
XI92_24430	COG1329	Transcriptional regulator
XI92_24440	COG3344	reverse transcriptase
XI92_24450	COG0069	glutamate synthase activity
XI92_24465	COG0346	lactoylglutathione lyase activity
XI92_24470	COG0400	carboxylic ester hydrolase activity
XI92_24475	COG5002	protein histidine kinase activity
XI92_24485	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_24525	COG0830	nickel cation binding
XI92_24545	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
XI92_24570	COG1396	sequence-specific DNA binding
XI92_24575	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_24580	COG1268	BioY protein
XI92_24585	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_24590	COG0183	Belongs to the thiolase family
XI92_24605	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
XI92_24615	COG2211	Major facilitator Superfamily
XI92_24635	COG0726	polysaccharide deacetylase
XI92_24645	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
XI92_24650	COG1132	(ABC) transporter
XI92_24700	COG0824	Thioesterase
XI92_24705	COG4841	protein insertion into membrane
XI92_24715	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
XI92_24715	COG1328	CTP reductase activity
XI92_24725	COG0745	RESPONSE REGULATOR receiver
XI92_24730	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
XI92_24735	COG1832	CoA-binding protein
XI92_24745	COG0187	DNA topoisomerase II activity
XI92_24750	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
XI92_24755	COG0673	inositol 2-dehydrogenase activity
XI92_24775	COG1131	(ABC) transporter
XI92_24785	COG1595	DNA-templated transcription, initiation
XI92_24795	COG1316	TRANSCRIPTIONal
XI92_24800	COG4166	transmembrane transport
XI92_24805	COG4166	transmembrane transport
XI92_24810	COG4166	transmembrane transport
XI92_24815	COG2226	methyltransferase
XI92_24850	COG0531	amino acid
XI92_24865	COG0697	spore germination
XI92_24875	COG3383	formate dehydrogenase (NAD+) activity
XI92_24880	COG2427	Protein of unknown function (DUF1641)
XI92_24885	COG5609	conserved protein (DUF2294)
XI92_24890	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
XI92_24900	COG2116	formate transmembrane transporter activity
XI92_24905	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
XI92_24910	COG0303	'Molybdopterin
XI92_24915	COG0314	molybdopterin synthase activity
XI92_24925	COG0489	protein tyrosine kinase activity
XI92_24940	COG3326	Membrane
XI92_24945	COG2962	Rard protein
XI92_24950	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
XI92_24955	COG1657	PFAM Prenyltransferase squalene oxidase
XI92_24965	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_24970	COG1012	belongs to the aldehyde dehydrogenase family
XI92_24980	COG4145	pantothenate transmembrane transporter activity
XI92_24995	COG0165	Argininosuccinate lyase
XI92_25005	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_25025	COG1051	belongs to the nudix hydrolase family
XI92_25040	COG0716	FMN binding
XI92_25050	COG1278	Cold shock
XI92_25080	COG2720	vancomycin resistance protein
XI92_25085	COG2514	catechol 2,3-dioxygenase activity
XI92_25095	COG1285	pathogenesis
XI92_25105	COG3852	Histidine kinase
XI92_25175	COG1404	Belongs to the peptidase S8 family
XI92_25210	COG0457	Tetratricopeptide repeat
XI92_25220	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
XI92_25255	COG3344	reverse transcriptase
XI92_25285	COG0697	spore germination
XI92_25295	COG3397	chitin binding
XI92_25300	COG0823	Involved in the tonB-independent uptake of proteins
XI92_25310	COG1252	NADH dehydrogenase
XI92_25315	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
XI92_25315	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_25325	COG1183	phosphatidylcholine synthase activity
XI92_25350	COG0277	FAD linked oxidase domain protein
XI92_25355	COG0385	Bile acid
XI92_25365	COG0457	Tetratricopeptide repeat
XI92_25380	COG0604	alcohol dehydrogenase
XI92_25385	COG0640	Transcriptional regulator
XI92_25400	COG0584	glycerophosphoryl diester phosphodiesterase
XI92_25425	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
XI92_25455	COG1164	Oligoendopeptidase f
XI92_25460	COG2162	N-hydroxyarylamine O-acetyltransferase activity
XI92_25470	COG1193	negative regulation of DNA recombination
XI92_25485	COG2890	protein-(glutamine-N5) methyltransferase activity
XI92_25495	COG0583	DNA-binding transcription factor activity
XI92_25510	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_25530	COG3739	integral membrane protein
XI92_25535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_25540	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
XI92_25545	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
XI92_25550	COG1247	-acetyltransferase
XI92_25560	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
XI92_25565	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
XI92_25595	COG2814	Major facilitator Superfamily
XI92_25600	COG1113	amino acid transport
XI92_25655	COG1151	hydroxylamine reductase activity
XI92_25710	COG1191	sigma factor activity
XI92_25720	COG0726	polysaccharide deacetylase
XI92_25735	COG1733	regulation of RNA biosynthetic process
XI92_25740	COG2249	NAD(P)H dehydrogenase (quinone) activity
XI92_25745	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_25765	COG0384	phenazine biosynthesis protein PhzF
XI92_25785	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_25805	COG0673	inositol 2-dehydrogenase activity
XI92_25810	COG2188	Transcriptional regulator
XI92_25835	COG0814	amino acid
XI92_25850	COG1733	regulation of RNA biosynthetic process
XI92_25855	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
XI92_25860	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
XI92_25860	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
XI92_25870	COG0840	transmembrane signaling receptor activity
XI92_25900	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
XI92_25905	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
XI92_25910	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
XI92_25915	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
XI92_25925	COG1070	Carbohydrate kinase
XI92_25930	COG2706	6-phosphogluconolactonase activity
XI92_25935	COG3813	Protein conserved in bacteria
XI92_25940	COG1357	PFAM Pentapeptide repeats (8 copies)
XI92_25950	COG0697	spore germination
XI92_25980	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
XI92_25990	COG0789	Transcriptional regulator
XI92_25995	COG1253	flavin adenine dinucleotide binding
XI92_26025	COG0477	Major facilitator Superfamily
XI92_26035	COG0500	methyltransferase
XI92_26060	COG0628	permease
XI92_26070	COG0180	Tryptophanyl-tRNA synthetase
XI92_26105	COG1011	Hydrolase
XI92_26130	COG1131	(ABC) transporter
XI92_26140	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_26170	COG0778	Nitroreductase
XI92_26175	COG1733	regulation of RNA biosynthetic process
XI92_26185	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
XI92_26200	COG1288	antiporter activity
XI92_26255	COG2249	NAD(P)H dehydrogenase (quinone) activity
XI92_26265	COG2031	fatty acid transporter
XI92_26280	COG2814	Major facilitator Superfamily
XI92_26285	COG1846	Transcriptional regulator
XI92_26300	COG0477	Major facilitator Superfamily
XI92_26310	COG2843	Capsule synthesis protein
XI92_26315	COG1876	peptidase activity
XI92_26340	COG5444	nuclease activity
XI92_26445	COG1396	sequence-specific DNA binding
XI92_26460	COG0726	polysaccharide deacetylase
XI92_26465	COG1309	transcriptional regulator
XI92_26470	COG0367	asparagine synthase
XI92_26500	COG1760	l-serine dehydratase
XI92_26505	COG1760	l-serine dehydratase
XI92_26510	COG0814	amino acid
XI92_26535	COG1533	DNA photolyase activity
XI92_26545	COG0076	glutamate decarboxylase activity
XI92_26570	COG0772	Belongs to the SEDS family
XI92_26580	COG2239	Acts as a magnesium transporter
XI92_26590	COG0768	penicillin binding
XI92_26595	COG1595	DNA-templated transcription, initiation
XI92_26625	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_26640	COG1131	(ABC) transporter
XI92_26650	COG1309	transcriptional regulator
XI92_26665	COG1960	acyl-CoA dehydrogenase activity
XI92_26670	COG0439	Biotin carboxylase
XI92_26675	COG0511	ligase activity, forming carbon-carbon bonds
XI92_26680	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
XI92_26685	COG1024	Enoyl-CoA hydratase
XI92_26690	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
XI92_26695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
XI92_26720	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_26735	COG0572	uridine kinase
XI92_26750	COG1686	Belongs to the peptidase S11 family
XI92_26780	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
XI92_26795	COG3227	Zinc metalloprotease (Elastase)
XI92_26800	COG2207	Transcriptional regulator
XI92_26855	COG1942	4-Oxalocrotonate Tautomerase
XI92_26860	COG0583	DNA-binding transcription factor activity
XI92_26870	COG1131	(ABC) transporter
XI92_26900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_26905	COG2368	4-hydroxyphenylacetate
XI92_26930	COG3344	reverse transcriptase
XI92_26950	COG2323	membrane
XI92_26955	COG0693	protein deglycase activity
XI92_26965	COG3386	PFAM SMP-30 Gluconolaconase
XI92_26975	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
XI92_26980	COG3773	Cell wall hydrolase
XI92_26990	COG0745	RESPONSE REGULATOR receiver
XI92_27000	COG3344	reverse transcriptase
XI92_27020	COG1136	(ABC) transporter
XI92_27025	COG0577	efflux transmembrane transporter activity
XI92_27045	COG0460	homoserine dehydrogenase
XI92_27050	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_27060	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
XI92_27095	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_27120	COG2124	cytochrome p450
XI92_27155	COG0561	phosphatase activity
XI92_27160	COG5002	protein histidine kinase activity
XI92_27175	COG1819	glycosyl
XI92_27180	COG1794	racemase activity, acting on amino acids and derivatives
XI92_27200	COG2205	protein histidine kinase activity
XI92_27205	COG0582	viral genome integration into host DNA
XI92_27240	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
XI92_27265	COG0745	RESPONSE REGULATOR receiver
XI92_27270	COG5002	protein histidine kinase activity
XI92_27275	COG0604	alcohol dehydrogenase
XI92_27280	COG0671	phosphoesterase, PA-phosphatase related
XI92_27330	COG2814	Major facilitator Superfamily
XI92_27335	COG2814	Major facilitator Superfamily
XI92_27355	COG0584	glycerophosphoryl diester phosphodiesterase
XI92_27370	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_27375	COG0697	spore germination
XI92_27420	COG2223	nitrite transmembrane transporter activity
XI92_27435	COG0592	DNA-directed DNA polymerase activity
XI92_27460	COG3878	Protein conserved in bacteria
XI92_27485	COG4667	esterase of the alpha-beta hydrolase superfamily
XI92_27525	COG0322	excinuclease ABC activity
XI92_27545	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
XI92_27575	COG0745	RESPONSE REGULATOR receiver
XI92_27580	COG5002	protein histidine kinase activity
XI92_27595	COG1136	(ABC) transporter
XI92_27600	COG0577	efflux transmembrane transporter activity
XI92_27605	COG1073	alpha beta
XI92_27615	COG0076	glutamate decarboxylase activity
XI92_27630	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
XI92_27660	COG1523	belongs to the glycosyl hydrolase 13 family
XI92_27665	COG3227	Zinc metalloprotease (Elastase)
XI92_27670	COG0737	Belongs to the 5'-nucleotidase family
XI92_27685	COG0201	protein transport
XI92_27690	COG0697	spore germination
XI92_27695	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_27735	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_27750	COG2959	enzyme of heme biosynthesis
XI92_27755	COG3773	Cell wall hydrolase
XI92_27755	COG3409	Peptidoglycan-binding domain 1 protein
XI92_27790	COG1309	transcriptional regulator
XI92_27820	COG3284	Transcriptional regulator
XI92_27855	COG1959	2 iron, 2 sulfur cluster binding
XI92_27865	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
XI92_27870	COG0508	dehydrogenase complex catalyzes the overall conversion of
XI92_27875	COG0022	dehydrogenase e1 component
XI92_27880	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
XI92_27890	COG2814	Major facilitator Superfamily
XI92_27910	COG3344	reverse transcriptase
XI92_27925	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_27930	COG0456	acetyltransferase
XI92_27930	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
XI92_27970	COG4176	ABC-type proline glycine betaine transport system permease component
XI92_27975	COG0517	IMP dehydrogenase activity
XI92_27975	COG4175	Glycine betaine
XI92_27985	COG0740	serine-type endopeptidase activity
XI92_28005	COG2153	protein acetylation
XI92_28010	COG3397	chitin binding
XI92_28015	COG1819	glycosyl
XI92_28040	COG2226	methyltransferase
XI92_28045	COG2315	Protein conserved in bacteria
XI92_28090	COG0456	acetyltransferase
XI92_28095	COG3973	AAA domain
XI92_28105	COG2105	PFAM AIG2 family protein
XI92_28110	COG0514	ATP-dependent DNA helicase (RecQ)
XI92_28130	COG2801	Transposase and inactivated derivatives
XI92_28150	COG2801	Transposase and inactivated derivatives
XI92_28165	COG4637	Psort location Cytoplasmic, score
XI92_28180	COG3397	chitin binding
XI92_28195	COG1162	GTPase activity
XI92_28200	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
XI92_28205	COG1115	amino acid carrier protein
XI92_28210	COG1012	belongs to the aldehyde dehydrogenase family
XI92_28215	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
XI92_28225	COG3938	Belongs to the proline racemase family
XI92_28230	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
XI92_28270	COG0586	Pfam SNARE associated Golgi protein
XI92_28280	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
XI92_28290	COG4166	transmembrane transport
XI92_28300	COG4948	Mandelate Racemase Muconate Lactonizing
XI92_28315	COG0667	Aldo Keto reductase
XI92_28360	COG3850	Histidine kinase
XI92_28360	COG5002	protein histidine kinase activity
XI92_28365	COG0745	RESPONSE REGULATOR receiver
XI92_28395	COG1164	Oligoendopeptidase f
XI92_28400	COG1307	EDD domain protein, DegV family
XI92_28440	COG2814	Major facilitator Superfamily
XI92_28450	COG1664	Polymer-forming cytoskeletal
XI92_28455	COG0789	Transcriptional regulator
XI92_28465	COG0477	Major facilitator Superfamily
XI92_28465	COG2814	Major facilitator Superfamily
XI92_28485	COG2261	transglycosylase associated protein
XI92_28500	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
XI92_28535	COG0436	Aminotransferase
XI92_28540	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
XI92_28550	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
XI92_28565	COG1131	(ABC) transporter
XI92_28620	COG0628	permease
XI92_28635	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
XI92_28640	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
XI92_28645	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
XI92_28675	COG2746	aminoglycoside 3-N-acetyltransferase activity
XI92_28695	COG0697	spore germination
XI92_28715	COG4912	Dna alkylation repair
XI92_28720	COG0346	lactoylglutathione lyase activity
XI92_28725	COG0726	polysaccharide deacetylase
XI92_28730	COG0861	Integral membrane protein TerC family
XI92_28735	COG1368	sulfuric ester hydrolase activity
XI92_28740	COG0488	(ABC) transporter
XI92_28755	COG1033	growth of symbiont in host cell
XI92_28755	COG2409	Drug exporters of the RND superfamily
XI92_28760	COG1309	transcriptional regulator
XI92_28775	COG0287	Prephenate dehydrogenase
XI92_28790	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
XI92_28790	COG1605	Chorismate mutase
XI92_28830	COG3584	3D domain protein
XI92_28830	COG1388	LysM domain
XI92_28840	COG0277	FAD linked oxidase domain protein
XI92_28860	COG1879	ABC-type sugar transport system periplasmic component
XI92_28870	COG1172	Belongs to the binding-protein-dependent transport system permease family
XI92_28880	COG2390	Transcriptional regulator
XI92_28885	COG1070	Carbohydrate kinase
XI92_28910	COG2329	Antibiotic biosynthesis monooxygenase
XI92_28930	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
XI92_28940	COG2801	Transposase and inactivated derivatives
XI92_28955	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
XI92_28960	COG4187	Peptidase family M20/M25/M40
XI92_28965	COG1414	Transcriptional regulator
XI92_28970	COG0833	amino acid
XI92_28980	COG3239	Fatty acid desaturase
XI92_28990	COG2720	vancomycin resistance protein
XI92_28995	COG1785	Belongs to the alkaline phosphatase family
XI92_29005	COG3655	Transcriptional regulator
XI92_29025	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_29030	COG0346	lactoylglutathione lyase activity
XI92_29060	COG0714	Associated with various cellular activities
XI92_29085	COG0463	Glycosyl transferase, family 2
XI92_29105	COG0463	Glycosyl transferase, family 2
XI92_29135	COG0753	catalase activity
XI92_29175	COG0714	Associated with various cellular activities
XI92_29255	COG0778	Nitroreductase
XI92_29260	COG1846	Transcriptional regulator
XI92_29280	COG3831	ATPase activity
XI92_29280	COG4884	unkown
XI92_29305	COG0037	tRNA processing
XI92_29305	COG0590	tRNA wobble adenosine to inosine editing
XI92_29310	COG0456	acetyltransferase
XI92_29325	COG0697	spore germination
XI92_29330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_29370	COG0730	response to heat
XI92_29380	COG0833	amino acid
XI92_29465	COG1984	allophanate hydrolase subunit 2
XI92_29470	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
XI92_29475	COG1414	Transcriptional regulator
XI92_29485	COG3142	Participates in the control of copper homeostasis
XI92_29490	COG0640	Transcriptional regulator
XI92_29500	COG1960	acyl-CoA dehydrogenase activity
XI92_29525	COG0454	-acetyltransferase
XI92_29535	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
XI92_29545	COG2801	Transposase and inactivated derivatives
XI92_29550	COG2963	transposase activity
XI92_29565	COG3848	Pyruvate phosphate dikinase
XI92_29565	COG0574	Belongs to the PEP-utilizing enzyme family
XI92_29580	COG1522	sequence-specific DNA binding
XI92_29585	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_29590	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
XI92_29610	COG1063	alcohol dehydrogenase
XI92_29615	COG5002	protein histidine kinase activity
XI92_29680	COG3344	reverse transcriptase
XI92_29690	COG3344	reverse transcriptase
XI92_29835	COG3711	transcriptional antiterminator
XI92_29840	COG1263	PTS System
XI92_29840	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
XI92_29840	COG2190	(PTS) system
XI92_29845	COG2723	6-phospho-beta-galactosidase activity
XI92_29880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_29920	COG3344	reverse transcriptase
XI92_29925	COG3344	reverse transcriptase
XI92_29980	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_30065	COG3344	reverse transcriptase
XI92_30075	COG3316	Transposase and inactivated derivatives
XI92_30080	COG4974	Belongs to the 'phage' integrase family
XI92_30090	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
XI92_30100	COG1073	alpha beta
XI92_30105	COG3104	oligopeptide transport
XI92_30140	COG2259	Doxx family
XI92_30145	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_30170	COG2814	Major facilitator Superfamily
XI92_30190	COG1136	(ABC) transporter
XI92_30200	COG0745	RESPONSE REGULATOR receiver
XI92_30205	COG3850	Histidine kinase
XI92_30205	COG5002	protein histidine kinase activity
XI92_30225	COG2963	transposase activity
XI92_30230	COG2801	Transposase and inactivated derivatives
XI92_30235	COG1183	phosphatidylcholine synthase activity
XI92_30270	COG0457	Tetratricopeptide repeat
XI92_30335	COG1132	(ABC) transporter
XI92_30340	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
XI92_30350	COG1131	(ABC) transporter
XI92_30365	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
XI92_30400	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_30400	COG3409	Peptidoglycan-binding domain 1 protein
XI92_30430	COG2801	Transposase and inactivated derivatives
XI92_30455	COG1132	(ABC) transporter
XI92_30475	COG1475	DNA binding
XI92_30525	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
XI92_30530	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
XI92_30530	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_30530	COG0300	oxidoreductase activity
XI92_30530	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_30530	COG3321	synthase
XI92_30545	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
XI92_30550	COG1250	3-hydroxyacyl-CoA dehydrogenase
XI92_30565	COG1960	acyl-CoA dehydrogenase activity
XI92_30585	COG0300	oxidoreductase activity
XI92_30585	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
XI92_30585	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_30585	COG3321	synthase
XI92_30585	COG0318	PFAM AMP-dependent synthetase and ligase
XI92_30585	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
XI92_30585	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_30585	COG1028	Short-chain dehydrogenase reductase Sdr
XI92_30585	COG3321	synthase
XI92_30585	COG0300	oxidoreductase activity
XI92_30600	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
XI92_30615	COG0667	Aldo Keto reductase
XI92_30640	COG1396	sequence-specific DNA binding
XI92_30655	COG3344	reverse transcriptase
XI92_30690	COG0457	Tetratricopeptide repeat
XI92_30700	COG0210	DNA helicase
XI92_30740	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
XI92_30750	COG0457	Tetratricopeptide repeat
XI92_30760	COG0456	acetyltransferase
XI92_30760	COG1846	Transcriptional regulator
XI92_30800	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
XI92_30825	COG0457	Tetratricopeptide repeat
XI92_30830	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
XI92_30845	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
XI92_30890	COG0367	asparagine synthase
XI92_30895	COG1309	transcriptional regulator
XI92_30910	COG1136	(ABC) transporter
XI92_31005	COG2801	Transposase and inactivated derivatives
XI92_31050	COG3547	Transposase (IS116 IS110 IS902 family)
XI92_31060	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_31060	COG3409	Peptidoglycan-binding domain 1 protein
XI92_31060	COG1388	LysM domain
XI92_31065	COG0739	heme binding
XI92_31070	COG0741	lytic transglycosylase activity
XI92_31120	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
XI92_31125	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
XI92_31130	COG1687	branched-chain amino acid
XI92_31155	COG2233	PERMEase
XI92_31160	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
XI92_31165	COG0288	reversible hydration of carbon dioxide
XI92_31170	COG1522	sequence-specific DNA binding
XI92_31195	COG0542	response to heat
XI92_31200	COG0494	nUDIX hydrolase
XI92_31205	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
XI92_31215	COG0457	Tetratricopeptide repeat
XI92_31565	COG3344	reverse transcriptase
XI92_31575	COG3344	reverse transcriptase
XI92_31630	COG2311	Membrane
XI92_31650	COG0457	Tetratricopeptide repeat
XI92_31675	COG0583	DNA-binding transcription factor activity
XI92_31680	COG0655	NAD(P)H dehydrogenase (quinone) activity
XI92_31725	COG0730	response to heat
XI92_31750	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
XI92_31780	COG2002	toxin-antitoxin pair type II binding
XI92_31785	COG4166	transmembrane transport
XI92_31800	COG4974	Belongs to the 'phage' integrase family
XI92_31850	COG0653	protein targeting
XI92_31855	COG0457	Tetratricopeptide repeat
XI92_31880	COG2072	flavoprotein involved in K transport
XI92_31890	COG0697	spore germination
XI92_31900	COG3344	reverse transcriptase
XI92_31925	COG2162	N-hydroxyarylamine O-acetyltransferase activity
XI92_31950	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
XI92_31975	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_31975	COG3409	Peptidoglycan-binding domain 1 protein
XI92_32015	COG0659	secondary active sulfate transmembrane transporter activity
XI92_32020	COG0589	response to stress
XI92_32025	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
XI92_32035	COG2323	membrane
XI92_32040	COG1522	sequence-specific DNA binding
XI92_32045	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
XI92_32100	COG4824	toxin secretion phage lysis holin
XI92_32140	COG4974	Belongs to the 'phage' integrase family
XI92_32155	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_32155	COG3409	Peptidoglycan-binding domain 1 protein
XI92_32160	COG0475	glutathione-regulated potassium exporter activity
XI92_32165	COG0490	domain, Protein
XI92_32170	COG0840	transmembrane signaling receptor activity
XI92_32180	COG0675	Transposase, IS605 OrfB family
XI92_32240	COG0583	DNA-binding transcription factor activity
XI92_32245	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
XI92_32280	COG0640	Transcriptional regulator
XI92_32320	COG0675	Transposase, IS605 OrfB family
XI92_32330	COG2828	Protein conserved in bacteria
XI92_32365	COG2801	Transposase and inactivated derivatives
XI92_32370	COG2162	N-hydroxyarylamine O-acetyltransferase activity
XI92_32385	COG4974	Belongs to the 'phage' integrase family
XI92_32405	COG0457	Tetratricopeptide repeat
XI92_32690	COG0592	DNA-directed DNA polymerase activity
XI92_32695	COG4712	double-strand break repair protein
XI92_32730	COG3344	reverse transcriptase
XI92_32740	COG3344	reverse transcriptase
XI92_32865	COG3344	reverse transcriptase
XI92_33070	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
XI92_33125	COG4166	transmembrane transport
XI92_33130	COG0457	Tetratricopeptide repeat
XI92_33155	COG2801	Transposase and inactivated derivatives
XI92_33185	COG0551	DNA topoisomerase type I activity
XI92_33185	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
XI92_33245	COG3728	DNA packaging
XI92_33245	COG5484	DNA packaging
XI92_33345	COG5632	N-Acetylmuramoyl-L-alanine amidase
XI92_33345	COG1388	LysM domain
XI92_33345	COG3409	Peptidoglycan-binding domain 1 protein
XI92_33400	COG1396	sequence-specific DNA binding
XI92_33520	COG3331	DNA recombination
XI92_33550	COG0457	Tetratricopeptide repeat
XI92_33575	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
XI92_33620	COG0457	Tetratricopeptide repeat
XI92_33770	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
XI92_33810	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
XI92_33815	COG1522	sequence-specific DNA binding
XI92_33820	COG2323	membrane
XI92_34070	COG0739	heme binding
XI92_34115	COG0457	Tetratricopeptide repeat
XI92_34300	COG1522	sequence-specific DNA binding
XI92_34405	COG0659	secondary active sulfate transmembrane transporter activity
XI92_34415	COG2323	membrane
XI92_34420	COG1522	sequence-specific DNA binding
XI92_34425	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
XI92_34460	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
XI92_34550	COG1923	regulation of RNA biosynthetic process
XI92_34560	COG0457	Tetratricopeptide repeat