locus-tag class description AQ980_00075 PF00589 Phage integrase family AQ980_00205 PF00589 Phage integrase family AQ980_00205 PF14659 Phage integrase, N-terminal SAM-like domain AQ980_00210 PF02540 NAD synthase AQ980_00210 PF00958 GMP synthase C terminal domain AQ980_00210 PF00117 Glutamine amidotransferase class-I AQ980_00285 PF14659 Phage integrase, N-terminal SAM-like domain AQ980_00285 PF00589 Phage integrase family AQ980_00290 PF00118 TCP-1/cpn60 chaperonin family AQ980_00295 PF00166 Chaperonin 10 Kd subunit AQ980_00300 PF02517 CPBP intramembrane metalloprotease AQ980_00310 PF02629 CoA binding domain AQ980_00310 PF06971 Putative DNA-binding protein N-terminus AQ980_00315 PF12848 ABC transporter AQ980_00315 PF16326 ABC transporter C-terminal domain AQ980_00315 PF00005 ABC transporter AQ980_00320 PF00814 Glycoprotease family AQ980_00325 PF00583 Acetyltransferase (GNAT) family AQ980_00330 PF00814 Glycoprotease family AQ980_00335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AQ980_00425 PF17283 SprT-like zinc ribbon domain AQ980_00425 PF10263 SprT-like family AQ980_00435 PF00575 S1 RNA binding domain AQ980_00435 PF16921 Tex protein YqgF-like domain AQ980_00435 PF09371 Tex-like protein N-terminal domain AQ980_00435 PF17674 HHH domain AQ980_00440 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AQ980_00445 PF01402 Ribbon-helix-helix protein, copG family AQ980_00450 PF01168 Alanine racemase, N-terminal domain AQ980_00450 PF00842 Alanine racemase, C-terminal domain AQ980_00460 PF01648 4'-phosphopantetheinyl transferase superfamily AQ980_00465 PF01694 Rhomboid family AQ980_00470 PF03851 UV-endonuclease UvdE AQ980_00475 PF00270 DEAD/DEAH box helicase AQ980_00475 PF00271 Helicase conserved C-terminal domain AQ980_00480 PF01225 Mur ligase family, catalytic domain AQ980_00480 PF02875 Mur ligase family, glutamate ligase domain AQ980_00480 PF08245 Mur ligase middle domain AQ980_00485 PF07478 D-ala D-ala ligase C-terminus AQ980_00485 PF01820 D-ala D-ala ligase N-terminus AQ980_00490 PF07690 Major Facilitator Superfamily AQ980_00495 PF13520 Amino acid permease AQ980_00505 PF01557 Fumarylacetoacetate (FAA) hydrolase family AQ980_00510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_00550 PF13276 HTH-like domain AQ980_00550 PF00665 Integrase core domain AQ980_00550 PF13333 Integrase core domain AQ980_00555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ980_00555 PF00005 ABC transporter AQ980_00560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ980_00560 PF00005 ABC transporter AQ980_00575 PF01609 Transposase DDE domain AQ980_00580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_00600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_00610 PF00005 ABC transporter AQ980_00610 PF16326 ABC transporter C-terminal domain AQ980_00610 PF12848 ABC transporter AQ980_00635 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) AQ980_00655 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_00655 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_00665 PF00356 Bacterial regulatory proteins, lacI family AQ980_00665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AQ980_00675 PF01553 Acyltransferase AQ980_00685 PF14142 YrzO-like protein AQ980_00690 PF00892 EamA-like transporter family AQ980_00695 PF03466 LysR substrate binding domain AQ980_00695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_00710 PF12728 Helix-turn-helix domain AQ980_00710 PF12727 PBP superfamily domain AQ980_00720 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_00725 PF06800 Sugar transport protein AQ980_00730 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ980_00730 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ980_00735 PF00248 Aldo/keto reductase family AQ980_00745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_00750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_00765 PF12833 Helix-turn-helix domain AQ980_00780 PF07690 Major Facilitator Superfamily AQ980_00790 PF07690 Major Facilitator Superfamily AQ980_00795 PF01565 FAD binding domain AQ980_00805 PF00107 Zinc-binding dehydrogenase AQ980_00805 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_00810 PF03180 NLPA lipoprotein AQ980_00815 PF00005 ABC transporter AQ980_00815 PF09383 NIL domain AQ980_00820 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_00840 PF00326 Prolyl oligopeptidase family AQ980_00840 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AQ980_00845 PF01380 SIS domain AQ980_00855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AQ980_00855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AQ980_00855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AQ980_00855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AQ980_00860 PF07949 YbbR-like protein AQ980_00865 PF02457 DisA bacterial checkpoint controller nucleotide-binding AQ980_00870 PF00491 Arginase family AQ980_00875 PF02595 Glycerate kinase family AQ980_00945 PF01522 Polysaccharide deacetylase AQ980_00950 PF14089 KinB-signalling pathway activation in sporulation AQ980_00955 PF17898 Spore germination GerD central core domain AQ980_00960 PF10609 NUBPL iron-transfer P-loop NTPase AQ980_00965 PF01520 N-acetylmuramoyl-L-alanine amidase AQ980_00975 PF00380 Ribosomal protein S9/S16 AQ980_00980 PF00572 Ribosomal protein L13 AQ980_00985 PF01416 tRNA pseudouridine synthase AQ980_00990 PF02361 Cobalt transport protein AQ980_00995 PF00005 ABC transporter AQ980_01000 PF00005 ABC transporter AQ980_01005 PF01196 Ribosomal protein L17 AQ980_01010 PF01000 RNA polymerase Rpb3/RpoA insert domain AQ980_01010 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AQ980_01010 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AQ980_01015 PF00411 Ribosomal protein S11 AQ980_01020 PF00416 Ribosomal protein S13/S18 AQ980_01025 PF00444 Ribosomal protein L36 AQ980_01030 PF01176 Translation initiation factor 1A / IF-1 AQ980_01035 PF00557 Metallopeptidase family M24 AQ980_01040 PF05191 Adenylate kinase, active site lid AQ980_01045 PF00344 SecY translocase AQ980_01050 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AQ980_01055 PF00327 Ribosomal protein L30p/L7e AQ980_01060 PF03719 Ribosomal protein S5, C-terminal domain AQ980_01060 PF00333 Ribosomal protein S5, N-terminal domain AQ980_01065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AQ980_01070 PF00347 Ribosomal protein L6 AQ980_01075 PF00410 Ribosomal protein S8 AQ980_01080 PF00253 Ribosomal protein S14p/S29e AQ980_01085 PF00281 Ribosomal protein L5 AQ980_01085 PF00673 ribosomal L5P family C-terminus AQ980_01090 PF00467 KOW motif AQ980_01090 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AQ980_01095 PF00238 Ribosomal protein L14p/L23e AQ980_01100 PF00366 Ribosomal protein S17 AQ980_01105 PF00831 Ribosomal L29 protein AQ980_01110 PF00252 Ribosomal protein L16p/L10e AQ980_01115 PF00189 Ribosomal protein S3, C-terminal domain AQ980_01115 PF07650 KH domain AQ980_01120 PF00237 Ribosomal protein L22p/L17e AQ980_01125 PF00203 Ribosomal protein S19 AQ980_01130 PF00181 Ribosomal Proteins L2, RNA binding domain AQ980_01130 PF03947 Ribosomal Proteins L2, C-terminal domain AQ980_01135 PF00276 Ribosomal protein L23 AQ980_01140 PF00573 Ribosomal protein L4/L1 family AQ980_01145 PF00297 Ribosomal protein L3 AQ980_01150 PF00338 Ribosomal protein S10p/S20e AQ980_01155 PF03144 Elongation factor Tu domain 2 AQ980_01155 PF03143 Elongation factor Tu C-terminal domain AQ980_01155 PF00009 Elongation factor Tu GTP binding domain AQ980_01160 PF00009 Elongation factor Tu GTP binding domain AQ980_01160 PF03764 Elongation factor G, domain IV AQ980_01160 PF03144 Elongation factor Tu domain 2 AQ980_01160 PF00679 Elongation factor G C-terminus AQ980_01160 PF14492 Elongation Factor G, domain II AQ980_01165 PF00177 Ribosomal protein S7p/S5e AQ980_01170 PF00164 Ribosomal protein S12/S23 AQ980_01175 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AQ980_01180 PF04983 RNA polymerase Rpb1, domain 3 AQ980_01180 PF05000 RNA polymerase Rpb1, domain 4 AQ980_01180 PF00623 RNA polymerase Rpb1, domain 2 AQ980_01180 PF04998 RNA polymerase Rpb1, domain 5 AQ980_01180 PF04997 RNA polymerase Rpb1, domain 1 AQ980_01185 PF04560 RNA polymerase Rpb2, domain 7 AQ980_01185 PF04563 RNA polymerase beta subunit AQ980_01185 PF04565 RNA polymerase Rpb2, domain 3 AQ980_01185 PF10385 RNA polymerase beta subunit external 1 domain AQ980_01185 PF00562 RNA polymerase Rpb2, domain 6 AQ980_01185 PF04561 RNA polymerase Rpb2, domain 2 AQ980_01190 PF05175 Methyltransferase small domain AQ980_01195 PF16320 Ribosomal protein L7/L12 dimerisation domain AQ980_01195 PF00542 Ribosomal protein L7/L12 C-terminal domain AQ980_01200 PF00466 Ribosomal protein L10 AQ980_01205 PF00687 Ribosomal protein L1p/L10e family AQ980_01210 PF00298 Ribosomal protein L11, RNA binding domain AQ980_01210 PF03946 Ribosomal protein L11, N-terminal domain AQ980_01215 PF00467 KOW motif AQ980_01215 PF02357 Transcription termination factor nusG AQ980_01220 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AQ980_01225 PF00471 Ribosomal protein L33 AQ980_01230 PF04542 Sigma-70 region 2 AQ980_01230 PF08281 Sigma-70, region 4 AQ980_01235 PF05991 YacP-like NYN domain AQ980_01240 PF08032 RNA 2'-O ribose methyltransferase substrate binding AQ980_01240 PF00588 SpoU rRNA Methylase family AQ980_01245 PF00636 Ribonuclease III domain AQ980_01250 PF09190 DALR domain AQ980_01250 PF01406 tRNA synthetases class I (C) catalytic domain AQ980_01255 PF00132 Bacterial transferase hexapeptide (six repeats) AQ980_01255 PF06426 Serine acetyltransferase, N-terminal AQ980_01260 PF00749 tRNA synthetases class I (E and Q), catalytic domain AQ980_01265 PF02542 YgbB family AQ980_01270 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AQ980_01280 PF02457 DisA bacterial checkpoint controller nucleotide-binding AQ980_01280 PF10635 DisA bacterial checkpoint controller linker region AQ980_01285 PF18073 Rubredoxin metal binding domain AQ980_01290 PF07724 AAA domain (Cdc48 subfamily) AQ980_01290 PF17871 AAA lid domain AQ980_01290 PF02861 Clp amino terminal domain, pathogenicity island component AQ980_01290 PF10431 C-terminal, D2-small domain, of ClpB protein AQ980_01290 PF00004 ATPase family associated with various cellular activities (AAA) AQ980_01295 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AQ980_01300 PF02151 UvrB/uvrC motif AQ980_01305 PF05848 CtsR N-terminal HTH domain AQ980_01305 PF17727 CtsR C-terminal dimerization domain AQ980_01385 PF01336 OB-fold nucleic acid binding domain AQ980_01385 PF00152 tRNA synthetases class II (D, K and N) AQ980_01390 PF01207 Dihydrouridine synthase (Dus) AQ980_01395 PF01381 Helix-turn-helix AQ980_01400 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AQ980_01405 PF02152 Dihydroneopterin aldolase AQ980_01410 PF00809 Pterin binding enzyme AQ980_01415 PF01063 Amino-transferase class IV AQ980_01420 PF00117 Glutamine amidotransferase class-I AQ980_01425 PF00425 chorismate binding enzyme AQ980_01425 PF04715 Anthranilate synthase component I, N terminal region AQ980_01430 PF00291 Pyridoxal-phosphate dependent enzyme AQ980_01435 PF01430 Hsp33 protein AQ980_01440 PF03309 Type III pantothenate kinase AQ980_01445 PF06480 FtsH Extracellular AQ980_01445 PF00004 ATPase family associated with various cellular activities (AAA) AQ980_01445 PF01434 Peptidase family M41 AQ980_01445 PF17862 AAA+ lid domain AQ980_01455 PF11734 TilS substrate C-terminal domain AQ980_01455 PF09179 TilS substrate binding domain AQ980_01455 PF01171 PP-loop family AQ980_01460 PF07228 Stage II sporulation protein E (SpoIIE) AQ980_01475 PF00575 S1 RNA binding domain AQ980_01485 PF09578 Spore cortex protein YabQ (Spore_YabQ) AQ980_01490 PF07873 YabP family AQ980_01495 PF01479 S4 domain AQ980_01500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ980_01500 PF03819 MazG nucleotide pyrophosphohydrolase domain AQ980_01505 PF14667 Polysaccharide biosynthesis C-terminal domain AQ980_01505 PF01943 Polysaccharide biosynthesis protein AQ980_01510 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ980_01510 PF15714 Stage V sporulation protein T C-terminal, transcription factor AQ980_01515 PF17757 UvrB interaction domain AQ980_01515 PF00271 Helicase conserved C-terminal domain AQ980_01515 PF03461 TRCF domain AQ980_01515 PF02559 CarD-like/TRCF domain AQ980_01515 PF00270 DEAD/DEAH box helicase AQ980_01525 PF01195 Peptidyl-tRNA hydrolase AQ980_01530 PF14572 Phosphoribosyl synthetase-associated domain AQ980_01530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AQ980_01540 PF04026 SpoVG AQ980_01545 PF01042 Endoribonuclease L-PSP AQ980_01550 PF00156 Phosphoribosyl transferase domain AQ980_01550 PF09182 Bacterial purine repressor, N-terminal AQ980_01555 PF08544 GHMP kinases C terminal AQ980_01555 PF00288 GHMP kinases N terminal domain AQ980_01560 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ980_01565 PF06257 Biofilm formation stimulator VEG AQ980_01570 PF05582 YabG peptidase U57 AQ980_01575 PF00398 Ribosomal RNA adenine dimethylase AQ980_01580 PF13662 Toprim domain AQ980_01580 PF13331 Domain of unknown function (DUF4093) AQ980_01585 PF01026 TatD related DNase AQ980_01590 PF09334 tRNA synthetases class I (M) AQ980_01590 PF01588 Putative tRNA binding domain AQ980_01590 PF08264 Anticodon-binding domain of tRNA AQ980_01595 PF18277 AbrB C-terminal domain AQ980_01595 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ980_01600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ980_01605 PF01541 GIY-YIG catalytic domain AQ980_01610 PF05175 Methyltransferase small domain AQ980_01615 PF06156 Initiation control protein YabA AQ980_01620 PF04468 PSP1 C-terminal conserved region AQ980_01625 PF09115 DNA polymerase III, delta subunit, C terminal AQ980_01630 PF02223 Thymidylate kinase AQ980_01635 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AQ980_01635 PF01276 Orn/Lys/Arg decarboxylase, major domain AQ980_01670 PF07441 SigmaK-factor processing regulatory protein BofA AQ980_01675 PF10704 Protein of unknown function (DUF2508) AQ980_01680 PF02132 RecR protein AQ980_01680 PF13662 Toprim domain AQ980_01685 PF02575 YbaB/EbfC DNA-binding family AQ980_01690 PF12169 DNA polymerase III subunits gamma and tau domain III AQ980_01695 PF14437 MafB19-like deaminase AQ980_01705 PF00857 Isochorismatase family AQ980_01710 PF01712 Deoxynucleoside kinase AQ980_01715 PF01712 Deoxynucleoside kinase AQ980_01730 PF02403 Seryl-tRNA synthetase N-terminal domain AQ980_01730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ980_01735 PF01174 SNO glutamine amidotransferase family AQ980_01740 PF01680 SOR/SNZ family AQ980_01745 PF00768 D-alanyl-D-alanine carboxypeptidase AQ980_01745 PF07943 Penicillin-binding protein 5, C-terminal domain AQ980_01750 PF00571 CBS domain AQ980_01750 PF00478 IMP dehydrogenase / GMP reductase domain AQ980_01755 PF14175 YaaC-like Protein AQ980_01785 PF03989 DNA gyrase C-terminal domain, beta-propeller AQ980_01785 PF00521 DNA gyrase/topoisomerase IV, subunit A AQ980_01790 PF01751 Toprim domain AQ980_01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_01790 PF00986 DNA gyrase B subunit, carboxyl terminus AQ980_01790 PF00204 DNA gyrase B AQ980_01795 PF02463 RecF/RecN/SMC N terminal domain AQ980_01805 PF02768 DNA polymerase III beta subunit, C-terminal domain AQ980_01805 PF00712 DNA polymerase III beta subunit, N-terminal domain AQ980_01805 PF02767 DNA polymerase III beta subunit, central domain AQ980_01810 PF11638 DnaA N-terminal domain AQ980_01810 PF00308 Bacterial dnaA protein AQ980_01810 PF08299 Bacterial dnaA protein helix-turn-helix AQ980_01815 PF00468 Ribosomal protein L34 AQ980_01820 PF00825 Ribonuclease P AQ980_01825 PF02096 60Kd inner membrane protein AQ980_01830 PF14804 Jag N-terminus AQ980_01830 PF01424 R3H domain AQ980_01835 PF12631 MnmE helical domain AQ980_01835 PF01926 50S ribosome-binding GTPase AQ980_01835 PF10396 GTP-binding protein TrmE N-terminus AQ980_01840 PF01134 Glucose inhibited division protein A AQ980_01840 PF13932 GidA associated domain AQ980_01845 PF02527 rRNA small subunit methyltransferase G AQ980_01850 PF02195 ParB-like nuclease domain AQ980_01850 PF17762 HTH domain found in ParB protein AQ980_01855 PF13614 AAA domain AQ980_01860 PF17762 HTH domain found in ParB protein AQ980_01860 PF02195 ParB-like nuclease domain AQ980_01865 PF06866 Protein of unknown function (DUF1256) AQ980_01870 PF00924 Mechanosensitive ion channel AQ980_01875 PF06107 Bacterial protein of unknown function (DUF951) AQ980_01880 PF06071 Protein of unknown function (DUF933) AQ980_01880 PF01926 50S ribosome-binding GTPase AQ980_01885 PF01250 Ribosomal protein S6 AQ980_01890 PF00436 Single-strand binding protein family AQ980_01895 PF01084 Ribosomal protein S18 AQ980_01900 PF09991 Predicted membrane protein (DUF2232) AQ980_01905 PF02272 DHHA1 domain AQ980_01905 PF01368 DHH family AQ980_01910 PF01281 Ribosomal protein L9, N-terminal domain AQ980_01910 PF03948 Ribosomal protein L9, C-terminal domain AQ980_01915 PF00772 DnaB-like helicase N terminal domain AQ980_01915 PF03796 DnaB-like helicase C terminal domain AQ980_01920 PF00709 Adenylosuccinate synthetase AQ980_01945 PF00072 Response regulator receiver domain AQ980_01945 PF00486 Transcriptional regulatory protein, C terminal AQ980_01950 PF00512 His Kinase A (phospho-acceptor) domain AQ980_01950 PF13426 PAS domain AQ980_01950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_01950 PF00672 HAMP domain AQ980_01960 PF09648 YycH protein AQ980_01965 PF00753 Metallo-beta-lactamase superfamily AQ980_01970 PF13180 PDZ domain AQ980_01980 PF02590 Predicted SPOUT methyltransferase AQ980_01985 PF00512 His Kinase A (phospho-acceptor) domain AQ980_01985 PF00989 PAS fold AQ980_01985 PF13188 PAS domain AQ980_01985 PF13426 PAS domain AQ980_01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_02005 PF00478 IMP dehydrogenase / GMP reductase domain AQ980_02010 PF00270 DEAD/DEAH box helicase AQ980_02010 PF00271 Helicase conserved C-terminal domain AQ980_02010 PF03880 DbpA RNA binding domain AQ980_02025 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_02030 PF01609 Transposase DDE domain AQ980_02045 PF03006 Haemolysin-III related AQ980_02050 PF16363 GDP-mannose 4,6 dehydratase AQ980_02055 PF02293 AmiS/UreI family transporter AQ980_02065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AQ980_02065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AQ980_02070 PF02898 Nitric oxide synthase, oxygenase domain AQ980_02075 PF02028 BCCT, betaine/carnitine/choline family transporter AQ980_02080 PF07690 Major Facilitator Superfamily AQ980_02085 PF07694 5TMR of 5TMR-LYT AQ980_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_02085 PF06580 Histidine kinase AQ980_02085 PF13492 GAF domain AQ980_02090 PF04397 LytTr DNA-binding domain AQ980_02090 PF00072 Response regulator receiver domain AQ980_02095 PF03788 LrgA family AQ980_02100 PF04172 LrgB-like family AQ980_02105 PF01594 AI-2E family transporter AQ980_02110 PF01625 Peptide methionine sulfoxide reductase AQ980_02110 PF01641 SelR domain AQ980_02115 PF00873 AcrB/AcrD/AcrF family AQ980_02120 PF00440 Bacterial regulatory proteins, tetR family AQ980_02125 PF12848 ABC transporter AQ980_02125 PF00005 ABC transporter AQ980_02130 PF00535 Glycosyl transferase family 2 AQ980_02135 PF09586 Bacterial membrane protein YfhO AQ980_02145 PF00535 Glycosyl transferase family 2 AQ980_02160 PF00535 Glycosyl transferase family 2 AQ980_02165 PF03061 Thioesterase superfamily AQ980_02175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_02180 PF03458 UPF0126 domain AQ980_02190 PF00534 Glycosyl transferases group 1 AQ980_02190 PF13439 Glycosyltransferase Family 4 AQ980_02195 PF03808 Glycosyl transferase WecB/TagA/CpsF family AQ980_02200 PF07690 Major Facilitator Superfamily AQ980_02205 PF04397 LytTr DNA-binding domain AQ980_02205 PF00072 Response regulator receiver domain AQ980_02210 PF13722 5TM C-terminal transporter carbon starvation CstA AQ980_02210 PF02554 Carbon starvation protein CstA AQ980_02215 PF04328 Selenoprotein, putative AQ980_02220 PF00990 Diguanylate cyclase, GGDEF domain AQ980_02220 PF07694 5TMR of 5TMR-LYT AQ980_02225 PF08543 Phosphomethylpyrimidine kinase AQ980_02230 PF07730 Histidine kinase AQ980_02230 PF13185 GAF domain AQ980_02235 PF00072 Response regulator receiver domain AQ980_02235 PF00196 Bacterial regulatory proteins, luxR family AQ980_02240 PF02525 Flavodoxin-like fold AQ980_02245 PF00027 Cyclic nucleotide-binding domain AQ980_02250 PF13419 Haloacid dehalogenase-like hydrolase AQ980_02260 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ980_02265 PF04204 Homoserine O-succinyltransferase AQ980_02270 PF00742 Homoserine dehydrogenase AQ980_02270 PF01842 ACT domain AQ980_02270 PF03447 Homoserine dehydrogenase, NAD binding domain AQ980_02280 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AQ980_02280 PF00356 Bacterial regulatory proteins, lacI family AQ980_02285 PF13472 GDSL-like Lipase/Acylhydrolase family AQ980_02290 PF00005 ABC transporter AQ980_02295 PF12679 ABC-2 family transporter protein AQ980_02300 PF03167 Uracil DNA glycosylase superfamily AQ980_02305 PF12823 Domain of unknown function (DUF3817) AQ980_02315 PF00860 Permease family AQ980_02320 PF02254 TrkA-N domain AQ980_02320 PF07885 Ion channel AQ980_02330 PF04241 Protein of unknown function (DUF423) AQ980_02335 PF09671 Spore coat protein (Spore_GerQ) AQ980_02340 PF07486 Cell Wall Hydrolase AQ980_02345 PF00768 D-alanyl-D-alanine carboxypeptidase AQ980_02345 PF07943 Penicillin-binding protein 5, C-terminal domain AQ980_02355 PF01515 Phosphate acetyl/butaryl transferase AQ980_02360 PF03099 Biotin/lipoate A/B protein ligase family AQ980_02370 PF07293 Protein of unknown function (DUF1450) AQ980_02375 PF01032 FecCD transport family AQ980_02380 PF01032 FecCD transport family AQ980_02385 PF00005 ABC transporter AQ980_02390 PF01497 Periplasmic binding protein AQ980_02395 PF01966 HD domain AQ980_02400 PF01361 Tautomerase enzyme AQ980_02405 PF02163 Peptidase family M50 AQ980_02410 PF08741 YwhD family AQ980_02415 PF00912 Transglycosylase AQ980_02415 PF00905 Penicillin binding protein transpeptidase domain AQ980_02420 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ980_02425 PF13411 MerR HTH family regulatory protein AQ980_02430 PF07690 Major Facilitator Superfamily AQ980_02435 PF17284 Spermidine synthase tetramerisation domain AQ980_02440 PF00491 Arginase family AQ980_02460 PF02016 LD-carboxypeptidase N-terminal domain AQ980_02460 PF17676 LD-carboxypeptidase C-terminal domain AQ980_02465 PF09148 Domain of unknown function (DUF1934) AQ980_02470 PF03485 Arginyl tRNA synthetase N terminal domain AQ980_02470 PF05746 DALR anticodon binding domain AQ980_02470 PF00750 tRNA synthetases class I (R) AQ980_02475 PF04542 Sigma-70 region 2 AQ980_02475 PF08281 Sigma-70, region 4 AQ980_02500 PF13333 Integrase core domain AQ980_02500 PF00665 Integrase core domain AQ980_02500 PF13276 HTH-like domain AQ980_02505 PF02225 PA domain AQ980_02505 PF04389 Peptidase family M28 AQ980_02515 PF00557 Metallopeptidase family M24 AQ980_02520 PF00005 ABC transporter AQ980_02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_02530 PF07730 Histidine kinase AQ980_02535 PF00196 Bacterial regulatory proteins, luxR family AQ980_02535 PF00072 Response regulator receiver domain AQ980_02540 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ980_02540 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ980_02540 PF01447 Thermolysin metallopeptidase, catalytic domain AQ980_02540 PF03413 Peptidase propeptide and YPEB domain AQ980_02555 PF03707 Bacterial signalling protein N terminal repeat AQ980_02555 PF00990 Diguanylate cyclase, GGDEF domain AQ980_02555 PF00563 EAL domain AQ980_02575 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_02580 PF01609 Transposase DDE domain AQ980_02585 PF03851 UV-endonuclease UvdE AQ980_02590 PF13091 PLD-like domain AQ980_02595 PF02754 Cysteine-rich domain AQ980_02595 PF13183 4Fe-4S dicluster domain AQ980_02600 PF00108 Thiolase, N-terminal domain AQ980_02600 PF02803 Thiolase, C-terminal domain AQ980_02605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AQ980_02605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AQ980_02610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ980_02610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ980_02610 PF02770 Acyl-CoA dehydrogenase, middle domain AQ980_02615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ980_02615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ980_02615 PF02770 Acyl-CoA dehydrogenase, middle domain AQ980_02625 PF05066 HB1, ASXL, restriction endonuclease HTH domain AQ980_02630 PF06418 CTP synthase N-terminus AQ980_02630 PF00117 Glutamine amidotransferase class-I AQ980_02635 PF10740 Domain of unknown function (DUF2529) AQ980_02640 PF00072 Response regulator receiver domain AQ980_02645 PF01116 Fructose-bisphosphate aldolase class-II AQ980_02650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AQ980_02655 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AQ980_02660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ980_02660 PF07498 Rho termination factor, N-terminal domain AQ980_02660 PF07497 Rho termination factor, RNA-binding domain AQ980_02665 PF01197 Ribosomal protein L31 AQ980_02670 PF00265 Thymidine kinase AQ980_02675 PF03462 PCRF domain AQ980_02675 PF00472 RF-1 domain AQ980_02680 PF13847 Methyltransferase domain AQ980_02680 PF17827 PrmC N-terminal domain AQ980_02685 PF09551 Stage II sporulation protein R (spore_II_R) AQ980_02695 PF03481 Putative GTP-binding controlling metal-binding AQ980_02695 PF01300 Telomere recombination AQ980_02700 PF02659 Putative manganese efflux pump AQ980_02715 PF01613 Flavin reductase like domain AQ980_02720 PF07681 DoxX AQ980_02725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AQ980_02730 PF01451 Low molecular weight phosphotyrosine protein phosphatase AQ980_02735 PF02502 Ribose/Galactose Isomerase AQ980_02740 PF04260 Protein of unknown function (DUF436) AQ980_02745 PF00464 Serine hydroxymethyltransferase AQ980_02765 PF03899 ATP synthase I chain AQ980_02770 PF00119 ATP synthase A chain AQ980_02775 PF00137 ATP synthase subunit C AQ980_02780 PF00430 ATP synthase B/B' CF(0) AQ980_02785 PF00213 ATP synthase delta (OSCP) subunit AQ980_02790 PF02874 ATP synthase alpha/beta family, beta-barrel domain AQ980_02790 PF00306 ATP synthase alpha/beta chain, C terminal domain AQ980_02790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ980_02795 PF00231 ATP synthase AQ980_02800 PF02874 ATP synthase alpha/beta family, beta-barrel domain AQ980_02800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ980_02805 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AQ980_02805 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AQ980_02825 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AQ980_02830 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AQ980_02835 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AQ980_02840 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AQ980_02845 PF00146 NADH dehydrogenase AQ980_02855 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AQ980_02860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AQ980_02865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AQ980_02865 PF00361 Proton-conducting membrane transporter AQ980_02865 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AQ980_02870 PF00361 Proton-conducting membrane transporter AQ980_02875 PF00361 Proton-conducting membrane transporter AQ980_02880 PF06612 Protein of unknown function (DUF1146) AQ980_02890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AQ980_02895 PF08486 Stage II sporulation protein AQ980_02900 PF00072 Response regulator receiver domain AQ980_02900 PF04397 LytTr DNA-binding domain AQ980_02905 PF00005 ABC transporter AQ980_02915 PF01551 Peptidase family M23 AQ980_02925 PF12116 Stage III sporulation protein D AQ980_02935 PF07977 FabA-like domain AQ980_02940 PF13614 AAA domain AQ980_02945 PF13807 G-rich domain on putative tyrosine kinase AQ980_02945 PF02706 Chain length determinant protein AQ980_02950 PF13614 AAA domain AQ980_02960 PF00483 Nucleotidyl transferase AQ980_02965 PF02397 Bacterial sugar transferase AQ980_02975 PF00535 Glycosyl transferase family 2 AQ980_02985 PF00534 Glycosyl transferases group 1 AQ980_02985 PF13439 Glycosyltransferase Family 4 AQ980_02990 PF00535 Glycosyl transferase family 2 AQ980_02995 PF00535 Glycosyl transferase family 2 AQ980_03000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AQ980_03000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AQ980_03000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AQ980_03005 PF16363 GDP-mannose 4,6 dehydratase AQ980_03020 PF00072 Response regulator receiver domain AQ980_03020 PF00486 Transcriptional regulatory protein, C terminal AQ980_03025 PF00512 His Kinase A (phospho-acceptor) domain AQ980_03025 PF00989 PAS fold AQ980_03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_03025 PF16736 Single Cache-like AQ980_03040 PF07690 Major Facilitator Superfamily AQ980_03050 PF00005 ABC transporter AQ980_03055 PF12704 MacB-like periplasmic core domain AQ980_03055 PF02687 FtsX-like permease family AQ980_03060 PF04893 Yip1 domain AQ980_03065 PF04542 Sigma-70 region 2 AQ980_03065 PF04545 Sigma-70, region 4 AQ980_03095 PF00176 SNF2 family N-terminal domain AQ980_03095 PF00271 Helicase conserved C-terminal domain AQ980_03095 PF12419 SNF2 Helicase protein AQ980_03100 PF04434 SWIM zinc finger AQ980_03125 PF01476 LysM domain AQ980_03125 PF06725 3D domain AQ980_03130 PF02028 BCCT, betaine/carnitine/choline family transporter AQ980_03150 PF07662 Na+ dependent nucleoside transporter C-terminus AQ980_03150 PF01773 Na+ dependent nucleoside transporter N-terminus AQ980_03155 PF00877 NlpC/P60 family AQ980_03155 PF01476 LysM domain AQ980_03160 PF01063 Amino-transferase class IV AQ980_03165 PF00884 Sulfatase AQ980_03175 PF09988 Uncharacterized metal-binding protein (DUF2227) AQ980_03185 PF07282 Putative transposase DNA-binding domain AQ980_03185 PF01385 Probable transposase AQ980_03185 PF12323 Helix-turn-helix domain AQ980_03190 PF02652 L-lactate permease AQ980_03195 PF13667 ThiC-associated domain AQ980_03195 PF01964 Radical SAM ThiC family AQ980_03200 PF02040 Arsenical pump membrane protein AQ980_03205 PF02322 Cytochrome bd terminal oxidase subunit II AQ980_03210 PF01654 Cytochrome bd terminal oxidase subunit I AQ980_03225 PF03466 LysR substrate binding domain AQ980_03225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_03245 PF00375 Sodium:dicarboxylate symporter family AQ980_03250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AQ980_03255 PF02378 Phosphotransferase system, EIIC AQ980_03260 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AQ980_03265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AQ980_03270 PF02378 Phosphotransferase system, EIIC AQ980_03275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AQ980_03280 PF11975 Family 4 glycosyl hydrolase C-terminal domain AQ980_03280 PF02056 Family 4 glycosyl hydrolase AQ980_03285 PF04794 YdjC-like protein AQ980_03290 PF02417 Chromate transporter AQ980_03300 PF03610 PTS system fructose IIA component AQ980_03300 PF00158 Sigma-54 interaction domain AQ980_03300 PF00874 PRD domain AQ980_03310 PF00953 Glycosyl transferase family 4 AQ980_03315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AQ980_03315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AQ980_03315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AQ980_03320 PF02350 UDP-N-acetylglucosamine 2-epimerase AQ980_03325 PF03816 Cell envelope-related transcriptional attenuator domain AQ980_03330 PF01205 Uncharacterized protein family UPF0029 AQ980_03330 PF09186 Domain of unknown function (DUF1949) AQ980_03335 PF02645 Uncharacterised protein, DegV family COG1307 AQ980_03340 PF01638 HxlR-like helix-turn-helix AQ980_03345 PF00877 NlpC/P60 family AQ980_03345 PF01476 LysM domain AQ980_03350 PF04851 Type III restriction enzyme, res subunit AQ980_03350 PF00271 Helicase conserved C-terminal domain AQ980_03360 PF00313 'Cold-shock' DNA-binding domain AQ980_03365 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AQ980_03365 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AQ980_03395 PF00005 ABC transporter AQ980_03405 PF07516 SecA Wing and Scaffold domain AQ980_03405 PF01043 SecA preprotein cross-linking domain AQ980_03405 PF07517 SecA DEAD-like domain AQ980_03405 PF02810 SEC-C motif AQ980_03410 PF03462 PCRF domain AQ980_03410 PF00472 RF-1 domain AQ980_03420 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AQ980_03425 PF00005 ABC transporter AQ980_03430 PF18075 FtsX extracellular domain AQ980_03430 PF02687 FtsX-like permease family AQ980_03435 PF01471 Putative peptidoglycan binding domain AQ980_03435 PF03572 Peptidase family S41 AQ980_03435 PF17820 PDZ domain AQ980_03440 PF17820 PDZ domain AQ980_03445 PF00664 ABC transporter transmembrane region AQ980_03445 PF00005 ABC transporter AQ980_03450 PF01906 Putative heavy-metal-binding AQ980_03460 PF03358 NADPH-dependent FMN reductase AQ980_03465 PF00376 MerR family regulatory protein AQ980_03465 PF09278 MerR, DNA binding AQ980_03470 PF03466 LysR substrate binding domain AQ980_03470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_03475 PF03601 Conserved hypothetical protein 698 AQ980_03490 PF07739 TipAS antibiotic-recognition domain AQ980_03490 PF13411 MerR HTH family regulatory protein AQ980_03505 PF17757 UvrB interaction domain AQ980_03505 PF12344 Ultra-violet resistance protein B AQ980_03505 PF00271 Helicase conserved C-terminal domain AQ980_03505 PF02151 UvrB/uvrC motif AQ980_03505 PF04851 Type III restriction enzyme, res subunit AQ980_03510 PF17760 UvrA interaction domain AQ980_03510 PF00005 ABC transporter AQ980_03510 PF17755 UvrA DNA-binding domain AQ980_03520 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AQ980_03525 PF02603 HPr Serine kinase N terminus AQ980_03525 PF07475 HPr Serine kinase C-terminal domain AQ980_03530 PF01790 Prolipoprotein diacylglyceryl transferase AQ980_03535 PF13419 Haloacid dehalogenase-like hydrolase AQ980_03540 PF14602 Hexapeptide repeat of succinyl-transferase AQ980_03550 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_03560 PF00293 NUDIX domain AQ980_03565 PF03668 P-loop ATPase protein family AQ980_03570 PF01933 Uncharacterised protein family UPF0052 AQ980_03575 PF10298 WhiA N-terminal LAGLIDADG-like domain AQ980_03575 PF02650 WhiA C-terminal HTH domain AQ980_03575 PF14527 WhiA LAGLIDADG-like domain AQ980_03580 PF00381 PTS HPr component phosphorylation site AQ980_03585 PF00574 Clp protease AQ980_03590 PF04239 Protein of unknown function (DUF421) AQ980_03600 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AQ980_03605 PF07451 Stage V sporulation protein AD (SpoVAD) AQ980_03610 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AQ980_03630 PF00589 Phage integrase family AQ980_03630 PF14659 Phage integrase, N-terminal SAM-like domain AQ980_03655 PF10549 ORF11CD3 domain AQ980_03655 PF09669 Phage regulatory protein Rha (Phage_pRha) AQ980_03735 PF03838 Recombination protein U AQ980_03805 PF00574 Clp protease AQ980_03870 PF02371 Transposase IS116/IS110/IS902 family AQ980_03870 PF01548 Transposase AQ980_03875 PF05105 Bacteriophage holin family AQ980_03880 PF02371 Transposase IS116/IS110/IS902 family AQ980_03880 PF01548 Transposase AQ980_03885 PF01476 LysM domain AQ980_03885 PF01471 Putative peptidoglycan binding domain AQ980_03885 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_03890 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_03920 PF04552 Sigma-54, DNA binding domain AQ980_03920 PF04963 Sigma-54 factor, core binding domain AQ980_03920 PF00309 Sigma-54 factor, Activator interacting domain (AID) AQ980_03930 PF04198 Putative sugar-binding domain AQ980_03935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ980_03935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AQ980_03940 PF00162 Phosphoglycerate kinase AQ980_03945 PF00121 Triosephosphate isomerase AQ980_03950 PF01676 Metalloenzyme superfamily AQ980_03950 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AQ980_03955 PF00113 Enolase, C-terminal TIM barrel domain AQ980_03955 PF03952 Enolase, N-terminal domain AQ980_03960 PF01156 Inosine-uridine preferring nucleoside hydrolase AQ980_03965 PF03788 LrgA family AQ980_03970 PF04172 LrgB-like family AQ980_03975 PF03840 Preprotein translocase SecG subunit AQ980_03980 PF12146 Serine aminopeptidase, S33 AQ980_03985 PF17876 Cold shock domain AQ980_03985 PF00773 RNB domain AQ980_03985 PF00575 S1 RNA binding domain AQ980_03985 PF08206 Ribonuclease B OB domain AQ980_03990 PF01668 SmpB protein AQ980_04010 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_04015 PF01609 Transposase DDE domain AQ980_04025 PF00072 Response regulator receiver domain AQ980_04025 PF00486 Transcriptional regulatory protein, C terminal AQ980_04035 PF01032 FecCD transport family AQ980_04040 PF01032 FecCD transport family AQ980_04045 PF00005 ABC transporter AQ980_04055 PF01289 Thiol-activated cytolysin AQ980_04055 PF17440 Thiol-activated cytolysin beta sandwich domain AQ980_04070 PF06146 Phosphate-starvation-inducible E AQ980_04075 PF13302 Acetyltransferase (GNAT) domain AQ980_04080 PF12848 ABC transporter AQ980_04080 PF00005 ABC transporter AQ980_04085 PF07690 Major Facilitator Superfamily AQ980_04100 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AQ980_04105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AQ980_04125 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AQ980_04125 PF01565 FAD binding domain AQ980_04130 PF01479 S4 domain AQ980_04130 PF00579 tRNA synthetases class I (W and Y) AQ980_04135 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_04140 PF07849 Protein of unknown function (DUF1641) AQ980_04145 PF01638 HxlR-like helix-turn-helix AQ980_04150 PF07690 Major Facilitator Superfamily AQ980_04155 PF00248 Aldo/keto reductase family AQ980_04170 PF13460 NAD(P)H-binding AQ980_04175 PF01235 Sodium:alanine symporter family AQ980_04180 PF01235 Sodium:alanine symporter family AQ980_04185 PF01773 Na+ dependent nucleoside transporter N-terminus AQ980_04185 PF07662 Na+ dependent nucleoside transporter C-terminus AQ980_04195 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_04195 PF01348 Type II intron maturase AQ980_04200 PF07670 Nucleoside recognition AQ980_04200 PF01773 Na+ dependent nucleoside transporter N-terminus AQ980_04200 PF07662 Na+ dependent nucleoside transporter C-terminus AQ980_04205 PF01773 Na+ dependent nucleoside transporter N-terminus AQ980_04205 PF07662 Na+ dependent nucleoside transporter C-terminus AQ980_04210 PF04235 Protein of unknown function (DUF418) AQ980_04210 PF07786 Protein of unknown function (DUF1624) AQ980_04215 PF00210 Ferritin-like domain AQ980_04225 PF03641 Possible lysine decarboxylase AQ980_04240 PF00210 Ferritin-like domain AQ980_04245 PF01235 Sodium:alanine symporter family AQ980_04255 PF02080 TrkA-C domain AQ980_04260 PF00999 Sodium/hydrogen exchanger family AQ980_04265 PF09335 SNARE associated Golgi protein AQ980_04275 PF01047 MarR family AQ980_04280 PF02678 Pirin AQ980_04280 PF17954 Quercetinase C-terminal cupin domain AQ980_04285 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ980_04285 PF03413 Peptidase propeptide and YPEB domain AQ980_04285 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ980_04285 PF01447 Thermolysin metallopeptidase, catalytic domain AQ980_04290 PF01883 Iron-sulfur cluster assembly protein AQ980_04295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_04295 PF00672 HAMP domain AQ980_04295 PF02743 Cache domain AQ980_04300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_04300 PF02743 Cache domain AQ980_04300 PF00672 HAMP domain AQ980_04310 PF09334 tRNA synthetases class I (M) AQ980_04310 PF08264 Anticodon-binding domain of tRNA AQ980_04325 PF00512 His Kinase A (phospho-acceptor) domain AQ980_04325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_04325 PF16736 Single Cache-like AQ980_04325 PF00989 PAS fold AQ980_04330 PF00486 Transcriptional regulatory protein, C terminal AQ980_04330 PF00072 Response regulator receiver domain AQ980_04335 PF17969 L,D-transpeptidase C-terminal domain AQ980_04335 PF03734 L,D-transpeptidase catalytic domain AQ980_04345 PF09335 SNARE associated Golgi protein AQ980_04380 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_04380 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_04390 PF02096 60Kd inner membrane protein AQ980_04400 PF13520 Amino acid permease AQ980_04405 PF07690 Major Facilitator Superfamily AQ980_04420 PF00672 HAMP domain AQ980_04420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_04420 PF02743 Cache domain AQ980_04425 PF01910 Thiamine-binding protein AQ980_04430 PF10835 Protein of unknown function (DUF2573) AQ980_04435 PF01619 Proline dehydrogenase AQ980_04440 PF00768 D-alanyl-D-alanine carboxypeptidase AQ980_04440 PF07943 Penicillin-binding protein 5, C-terminal domain AQ980_04445 PF14115 YuzL-like protein AQ980_04450 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AQ980_04450 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AQ980_04450 PF00378 Enoyl-CoA hydratase/isomerase AQ980_04455 PF00108 Thiolase, N-terminal domain AQ980_04455 PF02803 Thiolase, C-terminal domain AQ980_04460 PF02770 Acyl-CoA dehydrogenase, middle domain AQ980_04460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ980_04460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ980_04465 PF00753 Metallo-beta-lactamase superfamily AQ980_04470 PF00440 Bacterial regulatory proteins, tetR family AQ980_04470 PF13305 Tetracyclin repressor-like, C-terminal domain AQ980_04485 PF00056 lactate/malate dehydrogenase, NAD binding domain AQ980_04485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AQ980_04505 PF03960 ArsC family AQ980_04510 PF01597 Glycine cleavage H-protein AQ980_04515 PF01751 Toprim domain AQ980_04520 PF00085 Thioredoxin AQ980_04530 PF00005 ABC transporter AQ980_04530 PF09383 NIL domain AQ980_04535 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_04540 PF03180 NLPA lipoprotein AQ980_04545 PF03180 NLPA lipoprotein AQ980_04550 PF00005 ABC transporter AQ980_04555 PF01458 Uncharacterized protein family (UPF0051) AQ980_04560 PF00266 Aminotransferase class-V AQ980_04565 PF01592 NifU-like N terminal domain AQ980_04570 PF01458 Uncharacterized protein family (UPF0051) AQ980_04575 PF02872 5'-nucleotidase, C-terminal domain AQ980_04580 PF08827 Domain of unknown function (DUF1805) AQ980_04585 PF09560 Sporulation protein YunB (Spo_YunB) AQ980_04590 PF01551 Peptidase family M23 AQ980_04595 PF04055 Radical SAM superfamily AQ980_04595 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AQ980_04615 PF10086 YhfC intramembrane metalloprotease AQ980_04620 PF13411 MerR HTH family regulatory protein AQ980_04620 PF07739 TipAS antibiotic-recognition domain AQ980_04625 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AQ980_04630 PF06265 Protein of unknown function (DUF1027) AQ980_04655 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AQ980_04660 PF01934 Protein of unknown function DUF86 AQ980_04670 PF13344 Haloacid dehalogenase-like hydrolase AQ980_04675 PF02525 Flavodoxin-like fold AQ980_04685 PF15608 PELOTA RNA binding domain AQ980_04685 PF11202 Phosphoribosyl transferase (PRTase) AQ980_04705 PF04608 Phosphatidylglycerophosphatase A AQ980_04720 PF01106 NifU-like domain AQ980_04725 PF07315 Protein of unknown function (DUF1462) AQ980_04770 PF08274 PhnA Zinc-Ribbon AQ980_04770 PF03831 PhnA domain AQ980_04775 PF03649 Uncharacterised protein family (UPF0014) AQ980_04780 PF00005 ABC transporter AQ980_04780 PF00664 ABC transporter transmembrane region AQ980_04780 PF03412 Peptidase C39 family AQ980_04790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_04795 PF07293 Protein of unknown function (DUF1450) AQ980_04800 PF01678 Diaminopimelate epimerase AQ980_04805 PF01521 Iron-sulphur cluster biosynthesis AQ980_04810 PF13276 HTH-like domain AQ980_04810 PF00665 Integrase core domain AQ980_04810 PF13333 Integrase core domain AQ980_04850 PF01381 Helix-turn-helix AQ980_04940 PF00589 Phage integrase family AQ980_04990 PF03354 Phage Terminase AQ980_05000 PF00574 Clp protease AQ980_05060 PF05105 Bacteriophage holin family AQ980_05065 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_05065 PF01476 LysM domain AQ980_05065 PF01471 Putative peptidoglycan binding domain AQ980_05125 PF04463 Protein of unknown function (DUF523) AQ980_05140 PF06445 GyrI-like small molecule binding domain AQ980_05150 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_05155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_05160 PF00293 NUDIX domain AQ980_05160 PF13344 Haloacid dehalogenase-like hydrolase AQ980_05170 PF06725 3D domain AQ980_05175 PF00883 Cytosol aminopeptidase family, catalytic domain AQ980_05175 PF02789 Cytosol aminopeptidase family, N-terminal domain AQ980_05180 PF10372 Bacterial membrane-spanning protein N-terminus AQ980_05180 PF02457 DisA bacterial checkpoint controller nucleotide-binding AQ980_05185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AQ980_05185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AQ980_05185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AQ980_05185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AQ980_05190 PF00483 Nucleotidyl transferase AQ980_05195 PF02632 BioY family AQ980_05205 PF03061 Thioesterase superfamily AQ980_05210 PF13276 HTH-like domain AQ980_05210 PF00665 Integrase core domain AQ980_05210 PF13333 Integrase core domain AQ980_05220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ980_05220 PF03129 Anticodon binding domain AQ980_05235 PF03600 Citrate transporter AQ980_05240 PF00929 Exonuclease AQ980_05245 PF08810 Kinase associated protein B AQ980_05260 PF00155 Aminotransferase class I and II AQ980_05270 PF00561 alpha/beta hydrolase fold AQ980_05270 PF08386 TAP-like protein AQ980_05275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ980_05275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ980_05280 PF01037 Lrp/AsnC ligand binding domain AQ980_05285 PF00155 Aminotransferase class I and II AQ980_05290 PF00575 S1 RNA binding domain AQ980_05295 PF04070 Domain of unknown function (DUF378) AQ980_05305 PF00342 Phosphoglucose isomerase AQ980_05310 PF08868 YugN-like family AQ980_05315 PF02254 TrkA-N domain AQ980_05315 PF07885 Ion channel AQ980_05320 PF02308 MgtC family AQ980_05355 PF05698 Bacterial trigger factor protein (TF) C-terminus AQ980_05355 PF05697 Bacterial trigger factor protein (TF) AQ980_05450 PF00056 lactate/malate dehydrogenase, NAD binding domain AQ980_05450 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AQ980_05465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AQ980_05465 PF02806 Alpha amylase, C-terminal all-beta domain AQ980_05465 PF00128 Alpha amylase, catalytic domain AQ980_05470 PF00483 Nucleotidyl transferase AQ980_05475 PF00483 Nucleotidyl transferase AQ980_05480 PF08323 Starch synthase catalytic domain AQ980_05480 PF00534 Glycosyl transferases group 1 AQ980_05485 PF00343 Carbohydrate phosphorylase AQ980_05505 PF01609 Transposase DDE domain AQ980_05515 PF00313 'Cold-shock' DNA-binding domain AQ980_05520 PF01258 Prokaryotic dksA/traR C4-type zinc finger AQ980_05525 PF01040 UbiA prenyltransferase family AQ980_05530 PF00425 chorismate binding enzyme AQ980_05535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ980_05535 PF16582 Middle domain of thiamine pyrophosphate AQ980_05535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ980_05540 PF12697 Alpha/beta hydrolase family AQ980_05545 PF00378 Enoyl-CoA hydratase/isomerase AQ980_05550 PF13193 AMP-binding enzyme C-terminal domain AQ980_05550 PF00501 AMP-binding enzyme AQ980_05565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AQ980_05565 PF13378 Enolase C-terminal domain-like AQ980_05570 PF00072 Response regulator receiver domain AQ980_05570 PF00486 Transcriptional regulatory protein, C terminal AQ980_05575 PF00512 His Kinase A (phospho-acceptor) domain AQ980_05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_05580 PF02557 D-alanyl-D-alanine carboxypeptidase AQ980_05585 PF01979 Amidohydrolase family AQ980_05590 PF03841 L-seryl-tRNA selenium transferase AQ980_05595 PF07071 KDGP aldolase AQ980_05610 PF00665 Integrase core domain AQ980_05610 PF13333 Integrase core domain AQ980_05620 PF02447 GntP family permease AQ980_05630 PF13977 BetI-type transcriptional repressor, C-terminal AQ980_05630 PF00440 Bacterial regulatory proteins, tetR family AQ980_05640 PF02687 FtsX-like permease family AQ980_05645 PF00005 ABC transporter AQ980_05650 PF02687 FtsX-like permease family AQ980_05655 PF02687 FtsX-like permease family AQ980_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_05665 PF00486 Transcriptional regulatory protein, C terminal AQ980_05665 PF00072 Response regulator receiver domain AQ980_05670 PF01022 Bacterial regulatory protein, arsR family AQ980_05675 PF07853 Protein of unknown function (DUF1648) AQ980_05675 PF13630 SdpI/YhfL protein family AQ980_05685 PF12833 Helix-turn-helix domain AQ980_05685 PF06445 GyrI-like small molecule binding domain AQ980_05690 PF00005 ABC transporter AQ980_05695 PF02687 FtsX-like permease family AQ980_05700 PF00398 Ribosomal RNA adenine dimethylase AQ980_05705 PF09335 SNARE associated Golgi protein AQ980_05730 PF00781 Diacylglycerol kinase catalytic domain AQ980_05760 PF00072 Response regulator receiver domain AQ980_05760 PF00486 Transcriptional regulatory protein, C terminal AQ980_05765 PF00672 HAMP domain AQ980_05765 PF00512 His Kinase A (phospho-acceptor) domain AQ980_05765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_05770 PF09515 Thiamine transporter protein (Thia_YuaJ) AQ980_05780 PF07670 Nucleoside recognition AQ980_05780 PF02421 Ferrous iron transport protein B AQ980_05780 PF17910 FeoB cytosolic helical domain AQ980_05780 PF07664 Ferrous iron transport protein B C terminus AQ980_05795 PF04012 PspA/IM30 family AQ980_05820 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_05820 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_05830 PF10676 Spore germination protein gerPA/gerPF AQ980_05835 PF02322 Cytochrome bd terminal oxidase subunit II AQ980_05840 PF01654 Cytochrome bd terminal oxidase subunit I AQ980_05845 PF00484 Carbonic anhydrase AQ980_05850 PF01809 Putative membrane protein insertion efficiency factor AQ980_05855 PF02664 S-Ribosylhomocysteinase (LuxS) AQ980_05885 PF00293 NUDIX domain AQ980_05890 PF13419 Haloacid dehalogenase-like hydrolase AQ980_05905 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_05910 PF00005 ABC transporter AQ980_05935 PF00884 Sulfatase AQ980_05940 PF00561 alpha/beta hydrolase fold AQ980_05940 PF08386 TAP-like protein AQ980_05950 PF02743 Cache domain AQ980_05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_05950 PF00512 His Kinase A (phospho-acceptor) domain AQ980_05955 PF13188 PAS domain AQ980_05955 PF00512 His Kinase A (phospho-acceptor) domain AQ980_05955 PF13426 PAS domain AQ980_05955 PF00989 PAS fold AQ980_05955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_05960 PF13419 Haloacid dehalogenase-like hydrolase AQ980_05965 PF00455 DeoR C terminal sensor domain AQ980_05965 PF08220 DeoR-like helix-turn-helix domain AQ980_05970 PF13419 Haloacid dehalogenase-like hydrolase AQ980_06005 PF01293 Phosphoenolpyruvate carboxykinase AQ980_06010 PF00438 S-adenosylmethionine synthetase, N-terminal domain AQ980_06010 PF02773 S-adenosylmethionine synthetase, C-terminal domain AQ980_06010 PF02772 S-adenosylmethionine synthetase, central domain AQ980_06015 PF13302 Acetyltransferase (GNAT) domain AQ980_06030 PF00994 Probable molybdopterin binding domain AQ980_06035 PF12804 MobA-like NTP transferase domain AQ980_06040 PF13439 Glycosyltransferase Family 4 AQ980_06040 PF00534 Glycosyl transferases group 1 AQ980_06045 PF01569 PAP2 superfamily AQ980_06050 PF00132 Bacterial transferase hexapeptide (six repeats) AQ980_06055 PF12146 Serine aminopeptidase, S33 AQ980_06060 PF10776 Protein of unknown function (DUF2600) AQ980_06075 PF01177 Asp/Glu/Hydantoin racemase AQ980_06080 PF06962 Putative rRNA methylase AQ980_06085 PF16199 Radical_SAM C-terminal domain AQ980_06085 PF04055 Radical SAM superfamily AQ980_06090 PF10732 Protein of unknown function (DUF2524) AQ980_06100 PF04235 Protein of unknown function (DUF418) AQ980_06100 PF07786 Protein of unknown function (DUF1624) AQ980_06105 PF00005 ABC transporter AQ980_06115 PF00589 Phage integrase family AQ980_06120 PF02080 TrkA-C domain AQ980_06125 PF00999 Sodium/hydrogen exchanger family AQ980_06130 PF07690 Major Facilitator Superfamily AQ980_06135 PF13603 Leucyl-tRNA synthetase, Domain 2 AQ980_06135 PF09334 tRNA synthetases class I (M) AQ980_06135 PF00133 tRNA synthetases class I (I, L, M and V) AQ980_06135 PF08264 Anticodon-binding domain of tRNA AQ980_06165 PF03845 Spore germination protein AQ980_06170 PF03323 Bacillus/Clostridium GerA spore germination protein AQ980_06175 PF00561 alpha/beta hydrolase fold AQ980_06185 PF00581 Rhodanese-like domain AQ980_06205 PF04055 Radical SAM superfamily AQ980_06205 PF06463 Molybdenum Cofactor Synthesis C AQ980_06210 PF00899 ThiF family AQ980_06215 PF01967 MoaC family AQ980_06220 PF03453 MoeA N-terminal region (domain I and II) AQ980_06220 PF03454 MoeA C-terminal region (domain IV) AQ980_06220 PF00994 Probable molybdopterin binding domain AQ980_06225 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AQ980_06230 PF02391 MoaE protein AQ980_06245 PF06800 Sugar transport protein AQ980_06255 PF02559 CarD-like/TRCF domain AQ980_06270 PF10957 Sporulation protein Cse60 AQ980_06280 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AQ980_06285 PF01022 Bacterial regulatory protein, arsR family AQ980_06290 PF07690 Major Facilitator Superfamily AQ980_06300 PF01943 Polysaccharide biosynthesis protein AQ980_06300 PF14667 Polysaccharide biosynthesis C-terminal domain AQ980_06305 PF01479 S4 domain AQ980_06305 PF00849 RNA pseudouridylate synthase AQ980_06310 PF08220 DeoR-like helix-turn-helix domain AQ980_06315 PF01546 Peptidase family M20/M25/M40 AQ980_06320 PF02834 LigT like Phosphoesterase AQ980_06325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AQ980_06325 PF00128 Alpha amylase, catalytic domain AQ980_06325 PF17999 Pullulanase N1-terminal domain AQ980_06330 PF01636 Phosphotransferase enzyme family AQ980_06335 PF14165 YtzH-like protein AQ980_06340 PF02390 Putative methyltransferase AQ980_06345 PF00753 Metallo-beta-lactamase superfamily AQ980_06355 PF05343 M42 glutamyl aminopeptidase AQ980_06360 PF01931 Protein of unknown function DUF84 AQ980_06365 PF00085 Thioredoxin AQ980_06370 PF07285 Protein of unknown function (DUF1444) AQ980_06375 PF01588 Putative tRNA binding domain AQ980_06375 PF14794 Domain of unknown function (DUF4479) AQ980_06385 PF01520 N-acetylmuramoyl-L-alanine amidase AQ980_06385 PF08239 Bacterial SH3 domain AQ980_06390 PF01580 FtsK/SpoIIIE family AQ980_06390 PF17854 FtsK alpha domain AQ980_06390 PF09397 Ftsk gamma domain AQ980_06400 PF01225 Mur ligase family, catalytic domain AQ980_06400 PF02875 Mur ligase family, glutamate ligase domain AQ980_06400 PF08245 Mur ligase middle domain AQ980_06405 PF13302 Acetyltransferase (GNAT) domain AQ980_06420 PF02073 Thermophilic metalloprotease (M29) AQ980_06430 PF11009 Protein of unknown function (DUF2847) AQ980_06435 PF07537 CamS sex pheromone cAM373 precursor AQ980_06440 PF00793 DAHP synthetase I family AQ980_06440 PF01817 Chorismate mutase type II AQ980_06450 PF00356 Bacterial regulatory proteins, lacI family AQ980_06475 PF01741 Large-conductance mechanosensitive channel, MscL AQ980_06480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ980_06485 PF04397 LytTr DNA-binding domain AQ980_06485 PF00072 Response regulator receiver domain AQ980_06505 PF06580 Histidine kinase AQ980_06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_06510 PF12796 Ankyrin repeats (3 copies) AQ980_06515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_06515 PF13426 PAS domain AQ980_06515 PF00512 His Kinase A (phospho-acceptor) domain AQ980_06515 PF00672 HAMP domain AQ980_06520 PF00486 Transcriptional regulatory protein, C terminal AQ980_06520 PF00072 Response regulator receiver domain AQ980_06535 PF00850 Histone deacetylase domain AQ980_06540 PF00571 CBS domain AQ980_06545 PF00583 Acetyltransferase (GNAT) family AQ980_06550 PF13193 AMP-binding enzyme C-terminal domain AQ980_06550 PF00501 AMP-binding enzyme AQ980_06555 PF12464 Maltose acetyltransferase AQ980_06555 PF14602 Hexapeptide repeat of succinyl-transferase AQ980_06565 PF08281 Sigma-70, region 4 AQ980_06565 PF04542 Sigma-70 region 2 AQ980_06575 PF00579 tRNA synthetases class I (W and Y) AQ980_06575 PF01479 S4 domain AQ980_06600 PF00163 Ribosomal protein S4/S9 N-terminal domain AQ980_06600 PF01479 S4 domain AQ980_06605 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ980_06610 PF13185 GAF domain AQ980_06615 PF00440 Bacterial regulatory proteins, tetR family AQ980_06620 PF00892 EamA-like transporter family AQ980_06625 PF03466 LysR substrate binding domain AQ980_06625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_06630 PF06160 Septation ring formation regulator, EzrA AQ980_06635 PF00266 Aminotransferase class-V AQ980_06640 PF02926 THUMP domain AQ980_06640 PF02568 Thiamine biosynthesis protein (ThiI) AQ980_06645 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ980_06650 PF13193 AMP-binding enzyme C-terminal domain AQ980_06650 PF00501 AMP-binding enzyme AQ980_06660 PF07969 Amidohydrolase family AQ980_06665 PF01513 ATP-NAD kinase AQ980_06675 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AQ980_06680 PF08534 Redoxin AQ980_06685 PF02384 N-6 DNA Methylase AQ980_06690 PF00871 Acetokinase family AQ980_06705 PF12787 EcsC protein family AQ980_06710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_06710 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_06720 PF01609 Transposase DDE domain AQ980_06730 PF00764 Arginosuccinate synthase AQ980_06735 PF00206 Lyase AQ980_06735 PF14698 Argininosuccinate lyase C-terminal AQ980_06755 PF00582 Universal stress protein family AQ980_06765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AQ980_06765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AQ980_06775 PF07883 Cupin domain AQ980_06810 PF01321 Creatinase/Prolidase N-terminal domain AQ980_06810 PF00557 Metallopeptidase family M24 AQ980_06825 PF03061 Thioesterase superfamily AQ980_06825 PF00392 Bacterial regulatory proteins, gntR family AQ980_06825 PF00571 CBS domain AQ980_06825 PF07085 DRTGG domain AQ980_06835 PF14007 YtpI-like protein AQ980_06840 PF02272 DHHA1 domain AQ980_06840 PF01368 DHH family AQ980_06850 PF14034 Sporulation protein YtrH AQ980_06855 PF02811 PHP domain AQ980_06855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ980_06855 PF01336 OB-fold nucleic acid binding domain AQ980_06855 PF14579 Helix-hairpin-helix motif AQ980_06855 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ980_06860 PF03949 Malic enzyme, NAD binding domain AQ980_06860 PF00390 Malic enzyme, N-terminal domain AQ980_06865 PF00392 Bacterial regulatory proteins, gntR family AQ980_06870 PF17848 Acetyl-coA carboxylase zinc finger domain AQ980_06870 PF01039 Carboxyl transferase domain AQ980_06875 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AQ980_06880 PF00365 Phosphofructokinase AQ980_06885 PF02887 Pyruvate kinase, alpha/beta domain AQ980_06885 PF00224 Pyruvate kinase, barrel domain AQ980_06885 PF00391 PEP-utilising enzyme, mobile domain AQ980_06890 PF04186 FxsA cytoplasmic membrane protein AQ980_06895 PF01594 AI-2E family transporter AQ980_06900 PF04284 Protein of unknown function (DUF441) AQ980_06910 PF00285 Citrate synthase, C-terminal domain AQ980_06915 PF00180 Isocitrate/isopropylmalate dehydrogenase AQ980_06920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AQ980_06920 PF00056 lactate/malate dehydrogenase, NAD binding domain AQ980_06935 PF00072 Response regulator receiver domain AQ980_06935 PF00486 Transcriptional regulatory protein, C terminal AQ980_06940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_06940 PF00512 His Kinase A (phospho-acceptor) domain AQ980_06940 PF00989 PAS fold AQ980_06940 PF16736 Single Cache-like AQ980_06945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AQ980_06945 PF01367 5'-3' exonuclease, C-terminal SAM fold AQ980_06945 PF00476 DNA polymerase family A AQ980_06950 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AQ980_06950 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AQ980_06950 PF06827 Zinc finger found in FPG and IleRS AQ980_06955 PF02659 Putative manganese efflux pump AQ980_06960 PF01121 Dephospho-CoA kinase AQ980_06965 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AQ980_06965 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ980_06970 PF02675 S-adenosylmethionine decarboxylase AQ980_06975 PF03477 ATP cone domain AQ980_06980 PF07261 Replication initiation and membrane attachment AQ980_06985 PF07319 Primosomal protein DnaI N-terminus AQ980_06985 PF01695 IstB-like ATP binding protein AQ980_06990 PF13783 Domain of unknown function (DUF4177) AQ980_06995 PF08812 YtxC-like family AQ980_07000 PF03129 Anticodon binding domain AQ980_07000 PF02824 TGS domain AQ980_07000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_07000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ980_07005 PF05198 Translation initiation factor IF-3, N-terminal domain AQ980_07005 PF00707 Translation initiation factor IF-3, C-terminal domain AQ980_07010 PF01632 Ribosomal protein L35 AQ980_07015 PF00453 Ribosomal protein L20 AQ980_07025 PF05343 M42 glutamyl aminopeptidase AQ980_07030 PF00440 Bacterial regulatory proteins, tetR family AQ980_07030 PF16859 Tetracyclin repressor-like, C-terminal domain AQ980_07040 PF07690 Major Facilitator Superfamily AQ980_07060 PF01966 HD domain AQ980_07065 PF14098 Small, acid-soluble spore protein I AQ980_07070 PF00588 SpoU rRNA Methylase family AQ980_07070 PF08032 RNA 2'-O ribose methyltransferase substrate binding AQ980_07075 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AQ980_07075 PF01409 tRNA synthetases class II core domain (F) AQ980_07080 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AQ980_07080 PF03147 Ferredoxin-fold anticodon binding domain AQ980_07080 PF03484 tRNA synthetase B5 domain AQ980_07080 PF01588 Putative tRNA binding domain AQ980_07080 PF03483 B3/4 domain AQ980_07085 PF01336 OB-fold nucleic acid binding domain AQ980_07085 PF00152 tRNA synthetases class II (D, K and N) AQ980_07105 PF01351 Ribonuclease HII AQ980_07105 PF11858 Domain of unknown function (DUF3378) AQ980_07110 PF05164 Cell division protein ZapA AQ980_07115 PF02674 Colicin V production protein AQ980_07120 PF02811 PHP domain AQ980_07120 PF14791 DNA polymerase beta thumb AQ980_07120 PF14716 Helix-hairpin-helix domain AQ980_07125 PF01713 Smr domain AQ980_07125 PF00488 MutS domain V AQ980_07135 PF01479 S4 domain AQ980_07135 PF00849 RNA pseudouridylate synthase AQ980_07140 PF05525 Branched-chain amino acid transport protein AQ980_07145 PF05031 Iron Transport-associated domain AQ980_07155 PF05031 Iron Transport-associated domain AQ980_07160 PF01497 Periplasmic binding protein AQ980_07165 PF01032 FecCD transport family AQ980_07170 PF00005 ABC transporter AQ980_07175 PF04203 Sortase domain AQ980_07180 PF03992 Antibiotic biosynthesis monooxygenase AQ980_07185 PF17785 PUA-like domain AQ980_07185 PF10672 S-adenosylmethionine-dependent methyltransferase AQ980_07190 PF09962 Uncharacterized conserved protein (DUF2196) AQ980_07200 PF00486 Transcriptional regulatory protein, C terminal AQ980_07200 PF00072 Response regulator receiver domain AQ980_07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_07205 PF00512 His Kinase A (phospho-acceptor) domain AQ980_07210 PF00005 ABC transporter AQ980_07240 PF05163 DinB family AQ980_07255 PF01497 Periplasmic binding protein AQ980_07265 PF13193 AMP-binding enzyme C-terminal domain AQ980_07265 PF00501 AMP-binding enzyme AQ980_07270 PF00440 Bacterial regulatory proteins, tetR family AQ980_07270 PF08359 YsiA-like protein, C-terminal region AQ980_07275 PF00378 Enoyl-CoA hydratase/isomerase AQ980_07280 PF01012 Electron transfer flavoprotein domain AQ980_07285 PF01012 Electron transfer flavoprotein domain AQ980_07285 PF00766 Electron transfer flavoprotein FAD-binding domain AQ980_07290 PF00085 Thioredoxin AQ980_07295 PF08459 UvrC Helix-hairpin-helix N-terminal AQ980_07295 PF02151 UvrB/uvrC motif AQ980_07295 PF01541 GIY-YIG catalytic domain AQ980_07300 PF10702 Protein of unknown function (DUF2507) AQ980_07305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AQ980_07310 PF02910 Fumarate reductase flavoprotein C-term AQ980_07310 PF00890 FAD binding domain AQ980_07315 PF13183 4Fe-4S dicluster domain AQ980_07315 PF13085 2Fe-2S iron-sulfur cluster binding domain AQ980_07320 PF03061 Thioesterase superfamily AQ980_07325 PF02557 D-alanyl-D-alanine carboxypeptidase AQ980_07330 PF01618 MotA/TolQ/ExbB proton channel family AQ980_07335 PF13677 Membrane MotB of proton-channel complex MotA/MotB AQ980_07335 PF00691 OmpA family AQ980_07340 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AQ980_07345 PF13732 Domain of unknown function (DUF4162) AQ980_07345 PF00005 ABC transporter AQ980_07355 PF02082 Transcriptional regulator AQ980_07360 PF00230 Major intrinsic protein AQ980_07365 PF13536 Putative multidrug resistance efflux transporter AQ980_07370 PF01381 Helix-turn-helix AQ980_07370 PF07883 Cupin domain AQ980_07375 PF04024 PspC domain AQ980_07380 PF07969 Amidohydrolase family AQ980_07385 PF00860 Permease family AQ980_07390 PF00196 Bacterial regulatory proteins, luxR family AQ980_07405 PF01177 Asp/Glu/Hydantoin racemase AQ980_07410 PF10646 Sporulation and spore germination AQ980_07415 PF01138 3' exoribonuclease family, domain 1 AQ980_07415 PF03725 3' exoribonuclease family, domain 2 AQ980_07420 PF01725 Ham1 family AQ980_07425 PF12850 Calcineurin-like phosphoesterase superfamily domain AQ980_07445 PF08000 Bacterial PH domain AQ980_07445 PF11724 YvbH-like oligomerisation region AQ980_07460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AQ980_07460 PF05698 Bacterial trigger factor protein (TF) C-terminus AQ980_07460 PF05697 Bacterial trigger factor protein (TF) AQ980_07465 PF07724 AAA domain (Cdc48 subfamily) AQ980_07465 PF06689 ClpX C4-type zinc finger AQ980_07465 PF10431 C-terminal, D2-small domain, of ClpB protein AQ980_07470 PF05362 Lon protease (S16) C-terminal proteolytic domain AQ980_07470 PF00004 ATPase family associated with various cellular activities (AAA) AQ980_07475 PF05362 Lon protease (S16) C-terminal proteolytic domain AQ980_07475 PF02190 ATP-dependent protease La (LON) substrate-binding domain AQ980_07475 PF00004 ATPase family associated with various cellular activities (AAA) AQ980_07480 PF01926 50S ribosome-binding GTPase AQ980_07485 PF02566 OsmC-like protein AQ980_07490 PF01047 MarR family AQ980_07495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AQ980_07495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AQ980_07495 PF01488 Shikimate / quinate 5-dehydrogenase AQ980_07500 PF01578 Cytochrome C assembly protein AQ980_07505 PF03900 Porphobilinogen deaminase, C-terminal domain AQ980_07505 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AQ980_07510 PF02602 Uroporphyrinogen-III synthase HemD AQ980_07515 PF00490 Delta-aminolevulinic acid dehydratase AQ980_07520 PF00202 Aminotransferase class-III AQ980_07525 PF01476 LysM domain AQ980_07535 PF10458 Valyl tRNA synthetase tRNA binding arm AQ980_07535 PF00133 tRNA synthetases class I (I, L, M and V) AQ980_07535 PF08264 Anticodon-binding domain of tRNA AQ980_07540 PF02875 Mur ligase family, glutamate ligase domain AQ980_07540 PF08245 Mur ligase middle domain AQ980_07550 PF02545 Maf-like protein AQ980_07555 PF04002 RadC-like JAB domain AQ980_07565 PF04085 rod shape-determining protein MreC AQ980_07575 PF03775 Septum formation inhibitor MinC, C-terminal domain AQ980_07580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AQ980_07585 PF01551 Peptidase family M23 AQ980_07590 PF02163 Peptidase family M50 AQ980_07595 PF00575 S1 RNA binding domain AQ980_07595 PF10150 Ribonuclease E/G family AQ980_07600 PF00829 Ribosomal prokaryotic L21 protein AQ980_07605 PF04327 Cysteine protease Prp AQ980_07610 PF01016 Ribosomal L27 protein AQ980_07615 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AQ980_07615 PF14682 Sporulation initiation phospho-transferase B, C-terminal AQ980_07620 PF01926 50S ribosome-binding GTPase AQ980_07620 PF09269 Domain of unknown function (DUF1967) AQ980_07620 PF01018 GTP1/OBG AQ980_07625 PF00072 Response regulator receiver domain AQ980_07625 PF00486 Transcriptional regulatory protein, C terminal AQ980_07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_07635 PF00005 ABC transporter AQ980_07640 PF02687 FtsX-like permease family AQ980_07645 PF02687 FtsX-like permease family AQ980_07650 PF00800 Prephenate dehydratase AQ980_07650 PF01842 ACT domain AQ980_07655 PF03473 MOSC domain AQ980_07655 PF03475 3-alpha domain AQ980_07660 PF08279 HTH domain AQ980_07660 PF02829 3H domain AQ980_07665 PF00266 Aminotransferase class-V AQ980_07670 PF00890 FAD binding domain AQ980_07670 PF02910 Fumarate reductase flavoprotein C-term AQ980_07675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AQ980_07675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AQ980_07680 PF02445 Quinolinate synthetase A protein AQ980_07685 PF01476 LysM domain AQ980_07705 PF01497 Periplasmic binding protein AQ980_07710 PF01330 RuvA N terminal domain AQ980_07710 PF07499 RuvA, C-terminal domain AQ980_07715 PF17864 RuvB AAA lid domain AQ980_07715 PF05496 Holliday junction DNA helicase RuvB P-loop domain AQ980_07715 PF05491 RuvB C-terminal winged helix domain AQ980_07720 PF11146 Protein of unknown function (DUF2905) AQ980_07725 PF02547 Queuosine biosynthesis protein AQ980_07730 PF01702 Queuine tRNA-ribosyltransferase AQ980_07735 PF02699 Preprotein translocase subunit AQ980_07745 PF04239 Protein of unknown function (DUF421) AQ980_07750 PF14667 Polysaccharide biosynthesis C-terminal domain AQ980_07750 PF01943 Polysaccharide biosynthesis protein AQ980_07755 PF13797 Post-transcriptional regulator AQ980_07760 PF02355 Protein export membrane protein AQ980_07760 PF07549 SecD/SecF GG Motif AQ980_07765 PF01545 Cation efflux family AQ980_07765 PF16916 Dimerisation domain of Zinc Transporter AQ980_07770 PF17768 RecJ OB domain AQ980_07770 PF01368 DHH family AQ980_07770 PF02272 DHHA1 domain AQ980_07770 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AQ980_07775 PF00156 Phosphoribosyl transferase domain AQ980_07780 PF04607 Region found in RelA / SpoT proteins AQ980_07780 PF13291 ACT domain AQ980_07780 PF02824 TGS domain AQ980_07785 PF02580 D-Tyr-tRNA(Tyr) deacylase AQ980_07795 PF03129 Anticodon binding domain AQ980_07795 PF13393 Histidyl-tRNA synthetase AQ980_07800 PF01336 OB-fold nucleic acid binding domain AQ980_07800 PF02938 GAD domain AQ980_07800 PF00152 tRNA synthetases class II (D, K and N) AQ980_07805 PF00899 ThiF family AQ980_07820 PF12002 MgsA AAA+ ATPase C terminal AQ980_07820 PF05496 Holliday junction DNA helicase RuvB P-loop domain AQ980_07820 PF16193 AAA C-terminal domain AQ980_07825 PF02082 Transcriptional regulator AQ980_07830 PF00266 Aminotransferase class-V AQ980_07845 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AQ980_07845 PF13538 UvrD-like helicase C-terminal domain AQ980_07845 PF14490 Helix-hairpin-helix containing domain AQ980_07865 PF01594 AI-2E family transporter AQ980_07875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_07875 PF02272 DHHA1 domain AQ980_07875 PF01411 tRNA synthetases class II (A) AQ980_07880 PF06135 IreB regulatory phosphoprotein AQ980_07885 PF03652 Holliday junction resolvase AQ980_07890 PF06949 Protein of unknown function (DUF1292) AQ980_07895 PF02618 YceG-like family AQ980_07915 PF00485 Phosphoribulokinase / Uridine kinase family AQ980_07920 PF01272 Transcription elongation factor, GreA/GreB, C-term AQ980_07920 PF03449 Transcription elongation factor, N-terminal AQ980_07930 PF03717 Penicillin-binding Protein dimerisation domain AQ980_07930 PF00905 Penicillin binding protein transpeptidase domain AQ980_07945 PF08241 Methyltransferase domain AQ980_07950 PF01048 Phosphorylase superfamily AQ980_07955 PF00291 Pyridoxal-phosphate dependent enzyme AQ980_07960 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ980_07965 PF00171 Aldehyde dehydrogenase family AQ980_07965 PF00465 Iron-containing alcohol dehydrogenase AQ980_07970 PF14143 YrhC-like protein AQ980_07975 PF01497 Periplasmic binding protein AQ980_07980 PF01032 FecCD transport family AQ980_07985 PF00005 ABC transporter AQ980_08015 PF07681 DoxX AQ980_08020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_08030 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AQ980_08050 PF00665 Integrase core domain AQ980_08055 PF01695 IstB-like ATP binding protein AQ980_08080 PF08386 TAP-like protein AQ980_08080 PF00561 alpha/beta hydrolase fold AQ980_08085 PF00583 Acetyltransferase (GNAT) family AQ980_08090 PF00245 Alkaline phosphatase AQ980_08100 PF04607 Region found in RelA / SpoT proteins AQ980_08105 PF00881 Nitroreductase family AQ980_08110 PF00471 Ribosomal protein L33 AQ980_08115 PF16244 Domain of unknown function (DUF4901) AQ980_08125 PF04542 Sigma-70 region 2 AQ980_08125 PF04545 Sigma-70, region 4 AQ980_08130 PF02666 Phosphatidylserine decarboxylase AQ980_08145 PF01926 50S ribosome-binding GTPase AQ980_08150 PF01488 Shikimate / quinate 5-dehydrogenase AQ980_08150 PF08501 Shikimate dehydrogenase substrate binding domain AQ980_08150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AQ980_08155 PF01985 CRS1 / YhbY (CRM) domain AQ980_08160 PF01467 Cytidylyltransferase-like AQ980_08165 PF01966 HD domain AQ980_08175 PF13649 Methyltransferase domain AQ980_08180 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ980_08180 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ980_08185 PF10531 SLBB domain AQ980_08190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ980_08195 PF00753 Metallo-beta-lactamase superfamily AQ980_08195 PF13567 Domain of unknown function (DUF4131) AQ980_08195 PF03772 Competence protein AQ980_08200 PF14141 YqzM-like protein AQ980_08205 PF06144 DNA polymerase III, delta subunit AQ980_08210 PF01649 Ribosomal protein S20 AQ980_08215 PF03418 Germination protease AQ980_08225 PF06421 GTP-binding protein LepA C-terminus AQ980_08225 PF03144 Elongation factor Tu domain 2 AQ980_08225 PF00009 Elongation factor Tu GTP binding domain AQ980_08225 PF00679 Elongation factor G C-terminus AQ980_08230 PF01638 HxlR-like helix-turn-helix AQ980_08235 PF06969 HemN C-terminal domain AQ980_08235 PF04055 Radical SAM superfamily AQ980_08240 PF01628 HrcA protein C terminal domain AQ980_08245 PF01025 GrpE AQ980_08250 PF00012 Hsp70 protein AQ980_08255 PF00226 DnaJ domain AQ980_08255 PF01556 DnaJ C terminal domain AQ980_08255 PF00684 DnaJ central domain AQ980_08265 PF04452 RNA methyltransferase AQ980_08270 PF00919 Uncharacterized protein family UPF0004 AQ980_08270 PF04055 Radical SAM superfamily AQ980_08270 PF01938 TRAM domain AQ980_08275 PF01165 Ribosomal protein S21 AQ980_08280 PF09424 Yqey-like protein AQ980_08285 PF07873 YabP family AQ980_08290 PF06898 Putative stage IV sporulation protein YqfD AQ980_08295 PF02562 PhoH-like protein AQ980_08300 PF07697 7TM-HD extracellular AQ980_08300 PF07698 7TM receptor with intracellular HD hydrolase AQ980_08300 PF01966 HD domain AQ980_08305 PF02130 Uncharacterized protein family UPF0054 AQ980_08310 PF01219 Prokaryotic diacylglycerol kinase AQ980_08315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ980_08320 PF07650 KH domain AQ980_08320 PF01926 50S ribosome-binding GTPase AQ980_08330 PF02565 Recombination protein O C terminal AQ980_08330 PF11967 Recombination protein O N terminal AQ980_08335 PF00571 CBS domain AQ980_08335 PF08279 HTH domain AQ980_08340 PF03618 Kinase/pyrophosphorylase AQ980_08350 PF01807 CHC2 zinc finger AQ980_08350 PF10410 DnaB-helicase binding domain of primase AQ980_08350 PF08275 DNA primase catalytic core, N-terminal domain AQ980_08355 PF04539 Sigma-70 region 3 AQ980_08355 PF04545 Sigma-70, region 4 AQ980_08355 PF04542 Sigma-70 region 2 AQ980_08355 PF00140 Sigma-70 factor, region 1.2 AQ980_08355 PF03979 Sigma-70 factor, region 1.1 AQ980_08360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AQ980_08365 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AQ980_08370 PF01784 NIF3 (NGG1p interacting factor 3) AQ980_08375 PF02401 LytB protein AQ980_08385 PF00270 DEAD/DEAH box helicase AQ980_08385 PF00271 Helicase conserved C-terminal domain AQ980_08390 PF01261 Xylose isomerase-like TIM barrel AQ980_08395 PF11116 Protein of unknown function (DUF2624) AQ980_08400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_08400 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_08405 PF00005 ABC transporter AQ980_08410 PF00950 ABC 3 transport family AQ980_08415 PF01475 Ferric uptake regulator family AQ980_08420 PF04551 GcpE protein AQ980_08430 PF06691 Protein of unknown function (DUF1189) AQ980_08440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AQ980_08440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AQ980_08445 PF07690 Major Facilitator Superfamily AQ980_08455 PF12849 PBP superfamily domain AQ980_08460 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_08465 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_08470 PF00005 ABC transporter AQ980_08475 PF01895 PhoU domain AQ980_08480 PF00483 Nucleotidyl transferase AQ980_08485 PF00471 Ribosomal protein L33 AQ980_08490 PF01812 5-formyltetrahydrofolate cyclo-ligase family AQ980_08495 PF06014 Bacterial protein of unknown function (DUF910) AQ980_08500 PF00480 ROK family AQ980_08505 PF10958 Protein of unknown function (DUF2759) AQ980_08510 PF00753 Metallo-beta-lactamase superfamily AQ980_08520 PF01022 Bacterial regulatory protein, arsR family AQ980_08530 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ980_08535 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ980_08545 PF02219 Methylenetetrahydrofolate reductase AQ980_08545 PF02574 Homocysteine S-methyltransferase AQ980_08550 PF02310 B12 binding domain AQ980_08550 PF02574 Homocysteine S-methyltransferase AQ980_08550 PF02607 B12 binding domain AQ980_08550 PF00809 Pterin binding enzyme AQ980_08550 PF02965 Vitamin B12 dependent methionine synthase, activation domain AQ980_08555 PF04101 Glycosyltransferase family 28 C-terminal domain AQ980_08555 PF03033 Glycosyltransferase family 28 N-terminal domain AQ980_08590 PF00375 Sodium:dicarboxylate symporter family AQ980_08595 PF11117 Protein of unknown function (DUF2626) AQ980_08605 PF00437 Type II/IV secretion system protein AQ980_08610 PF00482 Type II secretion system (T2SS), protein F AQ980_08645 PF01202 Shikimate kinase AQ980_08650 PF14038 YqzE-like protein AQ980_08670 PF11079 Bacterial protein YqhG of unknown function AQ980_08675 PF00271 Helicase conserved C-terminal domain AQ980_08675 PF00176 SNF2 family N-terminal domain AQ980_08680 PF01571 Aminomethyltransferase folate-binding domain AQ980_08680 PF08669 Glycine cleavage T-protein C-terminal barrel domain AQ980_08685 PF02347 Glycine cleavage system P-protein AQ980_08690 PF02347 Glycine cleavage system P-protein AQ980_08705 PF00392 Bacterial regulatory proteins, gntR family AQ980_08710 PF00005 ABC transporter AQ980_08745 PF00893 Small Multidrug Resistance protein AQ980_08750 PF00893 Small Multidrug Resistance protein AQ980_08760 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AQ980_08760 PF00356 Bacterial regulatory proteins, lacI family AQ980_08770 PF00581 Rhodanese-like domain AQ980_08775 PF03099 Biotin/lipoate A/B protein ligase family AQ980_08800 PF02742 Iron dependent repressor, metal binding and dimerisation domain AQ980_08800 PF01325 Iron dependent repressor, N-terminal DNA binding domain AQ980_08805 PF13419 Haloacid dehalogenase-like hydrolase AQ980_08815 PF07136 Protein of unknown function (DUF1385) AQ980_08820 PF11085 Conserved membrane protein YqhR AQ980_08825 PF01220 Dehydroquinase class II AQ980_08830 PF00557 Metallopeptidase family M24 AQ980_08830 PF01321 Creatinase/Prolidase N-terminal domain AQ980_08835 PF08207 Elongation factor P (EF-P) KOW-like domain AQ980_08835 PF01132 Elongation factor P (EF-P) OB domain AQ980_08835 PF09285 Elongation factor P, C-terminal AQ980_08860 PF09548 Stage III sporulation protein AB (spore_III_AB) AQ980_08865 PF06686 Stage III sporulation protein AC/AD protein family AQ980_08870 PF06686 Stage III sporulation protein AC/AD protein family AQ980_08875 PF09546 Stage III sporulation protein AE (spore_III_AE) AQ980_08880 PF09581 Stage III sporulation protein AF (Spore_III_AF) AQ980_08890 PF12685 SpoIIIAH-like protein AQ980_08900 PF00364 Biotin-requiring enzyme AQ980_08905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ980_08905 PF00289 Biotin carboxylase, N-terminal domain AQ980_08905 PF02785 Biotin carboxylase C-terminal domain AQ980_08910 PF03780 Asp23 family, cell envelope-related function AQ980_08915 PF01029 NusB family AQ980_08920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AQ980_08920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AQ980_08925 PF02601 Exonuclease VII, large subunit AQ980_08925 PF13742 OB-fold nucleic acid binding domain AQ980_08930 PF02609 Exonuclease VII small subunit AQ980_08935 PF00348 Polyprenyl synthetase AQ980_08940 PF02780 Transketolase, C-terminal domain AQ980_08940 PF02779 Transketolase, pyrimidine binding domain AQ980_08940 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AQ980_08945 PF01728 FtsJ-like methyltransferase AQ980_08945 PF01479 S4 domain AQ980_08950 PF02863 Arginine repressor, C-terminal domain AQ980_08950 PF01316 Arginine repressor, DNA binding domain AQ980_08955 PF13476 AAA domain AQ980_08960 PF05580 SpoIVB peptidase S55 AQ980_08960 PF17820 PDZ domain AQ980_08970 PF08769 Sporulation initiation factor Spo0A C terminal AQ980_08970 PF00072 Response regulator receiver domain AQ980_08980 PF14174 YycC-like protein AQ980_08985 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ980_08995 PF02954 Bacterial regulatory protein, Fis family AQ980_08995 PF00158 Sigma-54 interaction domain AQ980_08995 PF00989 PAS fold AQ980_09005 PF01515 Phosphate acetyl/butaryl transferase AQ980_09010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AQ980_09010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ980_09015 PF00871 Acetokinase family AQ980_09020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ980_09020 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_09025 PF00676 Dehydrogenase E1 component AQ980_09030 PF02780 Transketolase, C-terminal domain AQ980_09030 PF02779 Transketolase, pyrimidine binding domain AQ980_09035 PF00364 Biotin-requiring enzyme AQ980_09035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ980_09035 PF02817 e3 binding domain AQ980_09045 PF01098 Cell cycle protein AQ980_09050 PF04239 Protein of unknown function (DUF421) AQ980_09055 PF09297 NADH pyrophosphatase zinc ribbon domain AQ980_09055 PF00293 NUDIX domain AQ980_09060 PF11208 Protein of unknown function (DUF2992) AQ980_09065 PF06491 Disulphide isomerase AQ980_09070 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ980_09075 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_09080 PF00005 ABC transporter AQ980_09085 PF11728 Putative aromatic acid exporter C-terminal domain AQ980_09085 PF06081 Aromatic acid exporter family member 1 AQ980_09090 PF03734 L,D-transpeptidase catalytic domain AQ980_09105 PF13302 Acetyltransferase (GNAT) domain AQ980_09110 PF01546 Peptidase family M20/M25/M40 AQ980_09110 PF07687 Peptidase dimerisation domain AQ980_09115 PF00817 impB/mucB/samB family AQ980_09115 PF11799 impB/mucB/samB family C-terminal domain AQ980_09115 PF11798 IMS family HHH motif AQ980_09120 PF02308 MgtC family AQ980_09125 PF00690 Cation transporter/ATPase, N-terminus AQ980_09125 PF00689 Cation transporting ATPase, C-terminus AQ980_09145 PF00753 Metallo-beta-lactamase superfamily AQ980_09145 PF12706 Beta-lactamase superfamily domain AQ980_09155 PF03315 Serine dehydratase beta chain AQ980_09155 PF01842 ACT domain AQ980_09160 PF03313 Serine dehydratase alpha chain AQ980_09165 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ980_09165 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ980_09170 PF00753 Metallo-beta-lactamase superfamily AQ980_09175 PF00106 short chain dehydrogenase AQ980_09185 PF02774 Semialdehyde dehydrogenase, dimerisation domain AQ980_09185 PF01118 Semialdehyde dehydrogenase, NAD binding domain AQ980_09190 PF01960 ArgJ family AQ980_09195 PF00696 Amino acid kinase family AQ980_09200 PF00202 Aminotransferase class-III AQ980_09205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AQ980_09205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AQ980_09220 PF13404 AsnC-type helix-turn-helix domain AQ980_09220 PF01037 Lrp/AsnC ligand binding domain AQ980_09230 PF00149 Calcineurin-like phosphoesterase AQ980_09230 PF02872 5'-nucleotidase, C-terminal domain AQ980_09245 PF00202 Aminotransferase class-III AQ980_09255 PF00155 Aminotransferase class I and II AQ980_09260 PF08241 Methyltransferase domain AQ980_09260 PF12697 Alpha/beta hydrolase family AQ980_09265 PF13847 Methyltransferase domain AQ980_09270 PF06968 Biotin and Thiamin Synthesis associated domain AQ980_09270 PF04055 Radical SAM superfamily AQ980_09280 PF00885 6,7-dimethyl-8-ribityllumazine synthase AQ980_09285 PF00925 GTP cyclohydrolase II AQ980_09285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AQ980_09290 PF00677 Lumazine binding domain AQ980_09295 PF01872 RibD C-terminal domain AQ980_09295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ980_09305 PF10827 Protein of unknown function (DUF2552) AQ980_09310 PF12146 Serine aminopeptidase, S33 AQ980_09315 PF00583 Acetyltransferase (GNAT) family AQ980_09320 PF00356 Bacterial regulatory proteins, lacI family AQ980_09325 PF13726 Na+-H+ antiporter family AQ980_09325 PF03553 Na+/H+ antiporter family AQ980_09330 PF12146 Serine aminopeptidase, S33 AQ980_09340 PF02872 5'-nucleotidase, C-terminal domain AQ980_09340 PF00746 LPXTG cell wall anchor motif AQ980_09340 PF00149 Calcineurin-like phosphoesterase AQ980_09340 PF00565 Staphylococcal nuclease homologue AQ980_09350 PF04229 GrpB protein AQ980_09350 PF13673 Acetyltransferase (GNAT) domain AQ980_09355 PF00248 Aldo/keto reductase family AQ980_09360 PF00248 Aldo/keto reductase family AQ980_09365 PF13072 Mother cell inhibitor of FtsZ AQ980_09370 PF00293 NUDIX domain AQ980_09380 PF01944 Stage II sporulation protein M AQ980_09385 PF01475 Ferric uptake regulator family AQ980_09390 PF14004 Protein of unknown function (DUF4227) AQ980_09395 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_09395 PF00589 Phage integrase family AQ980_09400 PF13115 YtkA-like AQ980_09405 PF01676 Metalloenzyme superfamily AQ980_09410 PF01048 Phosphorylase superfamily AQ980_09415 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AQ980_09415 PF00591 Glycosyl transferase family, a/b domain AQ980_09415 PF02885 Glycosyl transferase family, helical bundle domain AQ980_09420 PF01544 CorA-like Mg2+ transporter protein AQ980_09425 PF00860 Permease family AQ980_09435 PF01047 MarR family AQ980_09450 PF00005 ABC transporter AQ980_09455 PF00392 Bacterial regulatory proteins, gntR family AQ980_09460 PF00768 D-alanyl-D-alanine carboxypeptidase AQ980_09460 PF07943 Penicillin-binding protein 5, C-terminal domain AQ980_09465 PF01740 STAS domain AQ980_09470 PF13581 Histidine kinase-like ATPase domain AQ980_09475 PF04542 Sigma-70 region 2 AQ980_09475 PF04539 Sigma-70 region 3 AQ980_09475 PF04545 Sigma-70, region 4 AQ980_09490 PF12164 Stage V sporulation protein AA AQ980_09495 PF13782 Stage V sporulation protein AB AQ980_09500 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AQ980_09505 PF07451 Stage V sporulation protein AD (SpoVAD) AQ980_09510 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AQ980_09515 PF14097 Stage V sporulation protein AE1 AQ980_09520 PF03323 Bacillus/Clostridium GerA spore germination protein AQ980_09530 PF06207 Protein of unknown function (DUF1002) AQ980_09535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AQ980_09540 PF00583 Acetyltransferase (GNAT) family AQ980_09545 PF03745 Domain of unknown function (DUF309) AQ980_09555 PF02616 Segregation and condensation protein ScpA AQ980_09565 PF04079 Segregation and condensation complex subunit ScpB AQ980_09575 PF01979 Amidohydrolase family AQ980_09580 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AQ980_09595 PF03123 CAT RNA binding domain AQ980_09595 PF00874 PRD domain AQ980_09600 PF00367 phosphotransferase system, EIIB AQ980_09600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AQ980_09600 PF02378 Phosphotransferase system, EIIC AQ980_09605 PF00381 PTS HPr component phosphorylation site AQ980_09610 PF00391 PEP-utilising enzyme, mobile domain AQ980_09610 PF02896 PEP-utilising enzyme, TIM barrel domain AQ980_09610 PF05524 PEP-utilising enzyme, N-terminal AQ980_09625 PF00881 Nitroreductase family AQ980_09630 PF00990 Diguanylate cyclase, GGDEF domain AQ980_09635 PF00144 Beta-lactamase AQ980_09640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ980_09640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AQ980_09655 PF03079 ARD/ARD' family AQ980_09660 PF00596 Class II Aldolase and Adducin N-terminal domain AQ980_09670 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AQ980_09670 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AQ980_09675 PF00155 Aminotransferase class I and II AQ980_09680 PF00795 Carbon-nitrogen hydrolase AQ980_09685 PF01636 Phosphotransferase enzyme family AQ980_09695 PF01609 Transposase DDE domain AQ980_09705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AQ980_09705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_09710 PF01022 Bacterial regulatory protein, arsR family AQ980_09715 PF00171 Aldehyde dehydrogenase family AQ980_09720 PF01022 Bacterial regulatory protein, arsR family AQ980_09740 PF00589 Phage integrase family AQ980_09740 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_09765 PF03551 Transcriptional regulator PadR-like family AQ980_09795 PF00293 NUDIX domain AQ980_09800 PF02803 Thiolase, C-terminal domain AQ980_09800 PF00108 Thiolase, N-terminal domain AQ980_09835 PF03459 TOBE domain AQ980_09835 PF17912 MalK OB fold domain AQ980_09835 PF00005 ABC transporter AQ980_09840 PF16657 Maltogenic Amylase, C-terminal domain AQ980_09840 PF00128 Alpha amylase, catalytic domain AQ980_09845 PF02903 Alpha amylase, N-terminal ig-like domain AQ980_09845 PF00128 Alpha amylase, catalytic domain AQ980_09845 PF16657 Maltogenic Amylase, C-terminal domain AQ980_09850 PF13416 Bacterial extracellular solute-binding protein AQ980_09855 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_09860 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_09865 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AQ980_09865 PF00356 Bacterial regulatory proteins, lacI family AQ980_09870 PF00155 Aminotransferase class I and II AQ980_09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_09880 PF00512 His Kinase A (phospho-acceptor) domain AQ980_09890 PF14040 Deoxyribonuclease NucA/NucB AQ980_09900 PF01717 Cobalamin-independent synthase, Catalytic domain AQ980_09900 PF08267 Cobalamin-independent synthase, N-terminal domain AQ980_09915 PF07690 Major Facilitator Superfamily AQ980_09940 PF14177 YkyB-like protein AQ980_09945 PF02541 Ppx/GppA phosphatase family AQ980_09950 PF17941 Polyphosphate kinase C-terminal domain 1 AQ980_09950 PF13090 Polyphosphate kinase C-terminal domain 2 AQ980_09950 PF13089 Polyphosphate kinase N-terminal domain AQ980_09950 PF02503 Polyphosphate kinase middle domain AQ980_09960 PF00149 Calcineurin-like phosphoesterase AQ980_09960 PF10518 TAT (twin-arginine translocation) pathway signal sequence AQ980_09970 PF10388 EAL-domain associated signalling protein domain AQ980_09970 PF00563 EAL domain AQ980_09985 PF08796 Protein of unknown function (DUF1797) AQ980_09995 PF04308 Ribonuclease H-like AQ980_10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_10010 PF03466 LysR substrate binding domain AQ980_10015 PF14602 Hexapeptide repeat of succinyl-transferase AQ980_10015 PF00132 Bacterial transferase hexapeptide (six repeats) AQ980_10015 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AQ980_10020 PF01546 Peptidase family M20/M25/M40 AQ980_10020 PF07687 Peptidase dimerisation domain AQ980_10030 PF02254 TrkA-N domain AQ980_10030 PF02080 TrkA-C domain AQ980_10035 PF17770 Ribonuclease J C-terminal domain AQ980_10035 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AQ980_10035 PF00753 Metallo-beta-lactamase superfamily AQ980_10050 PF01327 Polypeptide deformylase AQ980_10060 PF00676 Dehydrogenase E1 component AQ980_10065 PF02779 Transketolase, pyrimidine binding domain AQ980_10065 PF02780 Transketolase, C-terminal domain AQ980_10070 PF00364 Biotin-requiring enzyme AQ980_10070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ980_10070 PF02817 e3 binding domain AQ980_10075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ980_10075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_10110 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AQ980_10110 PF01276 Orn/Lys/Arg decarboxylase, major domain AQ980_10115 PF05256 Uncharacterised protein family (UPF0223) AQ980_10120 PF06335 Protein of unknown function (DUF1054) AQ980_10130 PF00459 Inositol monophosphatase family AQ980_10145 PF14036 YlaH-like protein AQ980_10155 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) AQ980_10165 PF02562 PhoH-like protein AQ980_10165 PF13638 PIN domain AQ980_10175 PF07408 Protein of unknown function (DUF1507) AQ980_10180 PF01098 Cell cycle protein AQ980_10185 PF02436 Conserved carboxylase domain AQ980_10185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ980_10185 PF02785 Biotin carboxylase C-terminal domain AQ980_10185 PF00682 HMGL-like AQ980_10185 PF00289 Biotin carboxylase, N-terminal domain AQ980_10185 PF00364 Biotin-requiring enzyme AQ980_10190 PF02628 Cytochrome oxidase assembly protein AQ980_10195 PF01040 UbiA prenyltransferase family AQ980_10200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AQ980_10200 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AQ980_10200 PF00034 Cytochrome c AQ980_10205 PF00115 Cytochrome C and Quinol oxidase polypeptide I AQ980_10210 PF00510 Cytochrome c oxidase subunit III AQ980_10215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AQ980_10220 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AQ980_10225 PF00795 Carbon-nitrogen hydrolase AQ980_10230 PF08868 YugN-like family AQ980_10235 PF00188 Cysteine-rich secretory protein family AQ980_10235 PF14504 CAP-associated N-terminal AQ980_10240 PF14071 Putative coat protein AQ980_10245 PF14003 YlbE-like protein AQ980_10250 PF00300 Histidine phosphatase superfamily (branch 1) AQ980_10255 PF06133 Control of competence regulator ComK, YlbF/YmcA AQ980_10260 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AQ980_10275 PF01467 Cytidylyltransferase-like AQ980_10280 PF07670 Nucleoside recognition AQ980_10285 PF01734 Patatin-like phospholipase AQ980_10290 PF13180 PDZ domain AQ980_10290 PF05362 Lon protease (S16) C-terminal proteolytic domain AQ980_10295 PF05636 HIGH Nucleotidyl Transferase AQ980_10300 PF02620 Large ribosomal RNA subunit accumulation protein YceD AQ980_10305 PF01783 Ribosomal L32p protein family AQ980_10315 PF00583 Acetyltransferase (GNAT) family AQ980_10320 PF02558 Ketopantoate reductase PanE/ApbA AQ980_10320 PF08546 Ketopantoate reductase PanE/ApbA C terminal AQ980_10325 PF10079 Bacillithiol biosynthesis BshC AQ980_10330 PF01795 MraW methylase family AQ980_10335 PF04977 Septum formation initiator AQ980_10345 PF00905 Penicillin binding protein transpeptidase domain AQ980_10345 PF03717 Penicillin-binding Protein dimerisation domain AQ980_10345 PF03793 PASTA domain AQ980_10350 PF01225 Mur ligase family, catalytic domain AQ980_10350 PF02875 Mur ligase family, glutamate ligase domain AQ980_10350 PF08245 Mur ligase middle domain AQ980_10355 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AQ980_10355 PF00953 Glycosyl transferase family 4 AQ980_10360 PF08245 Mur ligase middle domain AQ980_10360 PF02875 Mur ligase family, glutamate ligase domain AQ980_10365 PF01098 Cell cycle protein AQ980_10370 PF04101 Glycosyltransferase family 28 C-terminal domain AQ980_10370 PF03033 Glycosyltransferase family 28 N-terminal domain AQ980_10375 PF01565 FAD binding domain AQ980_10375 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AQ980_10380 PF03799 Cell division protein FtsQ AQ980_10380 PF08478 POTRA domain, FtsQ-type AQ980_10385 PF02491 SHS2 domain inserted in FTSA AQ980_10390 PF00091 Tubulin/FtsZ family, GTPase domain AQ980_10390 PF12327 FtsZ family, C-terminal domain AQ980_10395 PF03419 Sporulation factor SpoIIGA AQ980_10400 PF04542 Sigma-70 region 2 AQ980_10400 PF04545 Sigma-70, region 4 AQ980_10405 PF04545 Sigma-70, region 4 AQ980_10405 PF04539 Sigma-70 region 3 AQ980_10405 PF04542 Sigma-70 region 2 AQ980_10410 PF05239 PRC-barrel domain AQ980_10420 PF01168 Alanine racemase, N-terminal domain AQ980_10425 PF04472 Cell division protein SepF AQ980_10430 PF02325 YGGT family AQ980_10435 PF17774 Putative RNA-binding domain in YlmH AQ980_10435 PF01479 S4 domain AQ980_10440 PF05103 DivIVA protein AQ980_10445 PF00133 tRNA synthetases class I (I, L, M and V) AQ980_10445 PF06827 Zinc finger found in FPG and IleRS AQ980_10445 PF08264 Anticodon-binding domain of tRNA AQ980_10455 PF01252 Signal peptidase (SPase) II AQ980_10460 PF00849 RNA pseudouridylate synthase AQ980_10460 PF01479 S4 domain AQ980_10465 PF00156 Phosphoribosyl transferase domain AQ980_10470 PF00860 Permease family AQ980_10475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AQ980_10475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AQ980_10480 PF01979 Amidohydrolase family AQ980_10485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AQ980_10485 PF00117 Glutamine amidotransferase class-I AQ980_10490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AQ980_10490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ980_10490 PF02142 MGS-like domain AQ980_10495 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AQ980_10500 PF01180 Dihydroorotate dehydrogenase AQ980_10505 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AQ980_10510 PF00156 Phosphoribosyl transferase domain AQ980_10535 PF01321 Creatinase/Prolidase N-terminal domain AQ980_10535 PF00557 Metallopeptidase family M24 AQ980_10545 PF00689 Cation transporting ATPase, C-terminus AQ980_10545 PF00690 Cation transporter/ATPase, N-terminus AQ980_10550 PF08340 Domain of unknown function (DUF1732) AQ980_10550 PF03755 YicC-like family, N-terminal region AQ980_10555 PF04025 Domain of unknown function (DUF370) AQ980_10560 PF00625 Guanylate kinase AQ980_10565 PF01192 RNA polymerase Rpb6 AQ980_10570 PF04127 DNA / pantothenate metabolism flavoprotein AQ980_10570 PF02441 Flavoprotein AQ980_10575 PF04851 Type III restriction enzyme, res subunit AQ980_10575 PF00271 Helicase conserved C-terminal domain AQ980_10575 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AQ980_10575 PF18074 Primosomal protein N C-terminal domain AQ980_10575 PF17764 3′ DNA-binding domain (3′BD) AQ980_10580 PF01327 Polypeptide deformylase AQ980_10585 PF00551 Formyl transferase AQ980_10585 PF02911 Formyl transferase, C-terminal domain AQ980_10590 PF01029 NusB family AQ980_10590 PF01189 16S rRNA methyltransferase RsmB/F AQ980_10595 PF04055 Radical SAM superfamily AQ980_10605 PF00069 Protein kinase domain AQ980_10605 PF03793 PASTA domain AQ980_10610 PF16745 RsgA N-terminal domain AQ980_10610 PF03193 RsgA GTPase AQ980_10615 PF00834 Ribulose-phosphate 3 epimerase family AQ980_10620 PF04263 Thiamin pyrophosphokinase, catalytic domain AQ980_10620 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AQ980_10625 PF08183 Stage V sporulation protein family AQ980_10630 PF00830 Ribosomal L28 family AQ980_10635 PF03780 Asp23 family, cell envelope-related function AQ980_10640 PF02734 DAK2 domain AQ980_10640 PF13684 Dihydroxyacetone kinase family AQ980_10645 PF17191 RecG wedge domain AQ980_10645 PF00271 Helicase conserved C-terminal domain AQ980_10645 PF00270 DEAD/DEAH box helicase AQ980_10650 PF03061 Thioesterase superfamily AQ980_10655 PF02504 Fatty acid synthesis protein AQ980_10660 PF00698 Acyl transferase domain AQ980_10670 PF00550 Phosphopantetheine attachment site AQ980_10675 PF00035 Double-stranded RNA binding motif AQ980_10675 PF14622 Ribonuclease-III-like AQ980_10680 PF06470 SMC proteins Flexible Hinge Domain AQ980_10680 PF02463 RecF/RecN/SMC N terminal domain AQ980_10685 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_10690 PF06470 SMC proteins Flexible Hinge Domain AQ980_10690 PF02463 RecF/RecN/SMC N terminal domain AQ980_10695 PF02881 SRP54-type protein, helical bundle domain AQ980_10695 PF00448 SRP54-type protein, GTPase domain AQ980_10700 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AQ980_10705 PF00448 SRP54-type protein, GTPase domain AQ980_10705 PF02978 Signal peptide binding domain AQ980_10705 PF02881 SRP54-type protein, helical bundle domain AQ980_10710 PF00886 Ribosomal protein S16 AQ980_10720 PF05239 PRC-barrel domain AQ980_10720 PF01782 RimM N-terminal domain AQ980_10725 PF01746 tRNA (Guanine-1)-methyltransferase AQ980_10730 PF01245 Ribosomal protein L19 AQ980_10735 PF10502 Signal peptidase, peptidase S26 AQ980_10740 PF01926 50S ribosome-binding GTPase AQ980_10745 PF01351 Ribonuclease HII AQ980_10750 PF08442 ATP-grasp domain AQ980_10750 PF00549 CoA-ligase AQ980_10755 PF02629 CoA binding domain AQ980_10755 PF00549 CoA-ligase AQ980_10760 PF02481 DNA recombination-mediator protein A AQ980_10765 PF01751 Toprim domain AQ980_10765 PF01131 DNA topoisomerase AQ980_10765 PF01396 Topoisomerase DNA binding C4 zinc finger AQ980_10770 PF01134 Glucose inhibited division protein A AQ980_10775 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_10775 PF00589 Phage integrase family AQ980_10780 PF00227 Proteasome subunit AQ980_10785 PF07724 AAA domain (Cdc48 subfamily) AQ980_10785 PF10431 C-terminal, D2-small domain, of ClpB protein AQ980_10785 PF00004 ATPase family associated with various cellular activities (AAA) AQ980_10790 PF06018 CodY GAF-like domain AQ980_10790 PF08222 CodY helix-turn-helix domain AQ980_10795 PF00318 Ribosomal protein S2 AQ980_10800 PF00889 Elongation factor TS AQ980_10805 PF00696 Amino acid kinase family AQ980_10810 PF01765 Ribosome recycling factor AQ980_10815 PF01255 Putative undecaprenyl diphosphate synthase AQ980_10825 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AQ980_10825 PF13288 DXP reductoisomerase C-terminal domain AQ980_10825 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AQ980_10830 PF17820 PDZ domain AQ980_10830 PF02163 Peptidase family M50 AQ980_10835 PF03129 Anticodon binding domain AQ980_10835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ980_10835 PF04073 Aminoacyl-tRNA editing domain AQ980_10840 PF11490 DNA polymerase III polC-type N-terminus II AQ980_10840 PF14480 DNA polymerase III polC-type N-terminus I AQ980_10840 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ980_10840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ980_10840 PF14579 Helix-hairpin-helix motif AQ980_10840 PF02811 PHP domain AQ980_10840 PF00929 Exonuclease AQ980_10845 PF02576 RimP N-terminal domain AQ980_10845 PF17384 RimP C-terminal SH3 domain AQ980_10850 PF00575 S1 RNA binding domain AQ980_10850 PF13184 NusA-like KH domain AQ980_10850 PF08529 NusA N-terminal domain AQ980_10855 PF04296 Protein of unknown function (DUF448) AQ980_10860 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AQ980_10865 PF00009 Elongation factor Tu GTP binding domain AQ980_10865 PF11987 Translation-initiation factor 2 AQ980_10865 PF04760 Translation initiation factor IF-2, N-terminal region AQ980_10870 PF04456 Protein of unknown function (DUF503) AQ980_10875 PF02033 Ribosome-binding factor A AQ980_10880 PF01509 TruB family pseudouridylate synthase (N terminal domain) AQ980_10880 PF16198 tRNA pseudouridylate synthase B C-terminal domain AQ980_10885 PF06574 FAD synthetase AQ980_10885 PF01687 Riboflavin kinase AQ980_10890 PF00312 Ribosomal protein S15 AQ980_10895 PF03725 3' exoribonuclease family, domain 2 AQ980_10895 PF01138 3' exoribonuclease family, domain 1 AQ980_10895 PF00013 KH domain AQ980_10895 PF00575 S1 RNA binding domain AQ980_10895 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AQ980_10900 PF01522 Polysaccharide deacetylase AQ980_10905 PF05193 Peptidase M16 inactive domain AQ980_10905 PF00675 Insulinase (Peptidase family M16) AQ980_10910 PF05239 PRC-barrel domain AQ980_10915 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AQ980_10915 PF16924 Dipicolinate synthase subunit A N-terminal domain AQ980_10920 PF02441 Flavoprotein AQ980_10925 PF01118 Semialdehyde dehydrogenase, NAD binding domain AQ980_10925 PF02774 Semialdehyde dehydrogenase, dimerisation domain AQ980_10930 PF13840 ACT domain AQ980_10930 PF00696 Amino acid kinase family AQ980_10935 PF00701 Dihydrodipicolinate synthetase family AQ980_10945 PF00753 Metallo-beta-lactamase superfamily AQ980_10945 PF17770 Ribonuclease J C-terminal domain AQ980_10945 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AQ980_10950 PF00574 Clp protease AQ980_10955 PF14035 YlzJ-like protein AQ980_10960 PF01580 FtsK/SpoIIIE family AQ980_10960 PF09397 Ftsk gamma domain AQ980_10960 PF17854 FtsK alpha domain AQ980_10965 PF07702 UTRA domain AQ980_10965 PF00392 Bacterial regulatory proteins, gntR family AQ980_10990 PF05193 Peptidase M16 inactive domain AQ980_10995 PF00675 Insulinase (Peptidase family M16) AQ980_10995 PF05193 Peptidase M16 inactive domain AQ980_11005 PF11588 Protein of unknown function (DUF3243) AQ980_11010 PF11868 Protein of unknown function (DUF3388) AQ980_11015 PF13464 Domain of unknown function (DUF4115) AQ980_11020 PF01066 CDP-alcohol phosphatidyltransferase AQ980_11025 PF18146 Damage-inducible protein CinA KH domain AQ980_11025 PF00994 Probable molybdopterin binding domain AQ980_11025 PF02464 Competence-damaged protein AQ980_11030 PF00154 recA bacterial DNA recombination protein AQ980_11035 PF01966 HD domain AQ980_11035 PF00013 KH domain AQ980_11035 PF12072 Domain of unknown function (DUF3552) AQ980_11040 PF13277 YmdB-like protein AQ980_11045 PF04232 Stage V sporulation protein S (SpoVS) AQ980_11050 PF01244 Membrane dipeptidase (Peptidase family M19) AQ980_11055 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AQ980_11055 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AQ980_11055 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AQ980_11060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ980_11065 PF01938 TRAM domain AQ980_11065 PF00919 Uncharacterized protein family UPF0004 AQ980_11065 PF04055 Radical SAM superfamily AQ980_11070 PF06133 Control of competence regulator ComK, YlbF/YmcA AQ980_11075 PF10628 Outer spore coat protein E (CotE) AQ980_11080 PF01624 MutS domain I AQ980_11080 PF05192 MutS domain III AQ980_11080 PF05190 MutS family domain IV AQ980_11080 PF05188 MutS domain II AQ980_11080 PF00488 MutS domain V AQ980_11085 PF01119 DNA mismatch repair protein, C-terminal domain AQ980_11085 PF08676 MutL C terminal dimerisation domain AQ980_11095 PF00350 Dynamin family AQ980_11100 PF00884 Sulfatase AQ980_11110 PF07486 Cell Wall Hydrolase AQ980_11115 PF00082 Subtilase family AQ980_11120 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AQ980_11125 PF00232 Glycosyl hydrolase family 1 AQ980_11130 PF07702 UTRA domain AQ980_11130 PF00392 Bacterial regulatory proteins, gntR family AQ980_11140 PF00155 Aminotransferase class I and II AQ980_11140 PF00392 Bacterial regulatory proteins, gntR family AQ980_11145 PF03788 LrgA family AQ980_11150 PF04172 LrgB-like family AQ980_11155 PF10787 Uncharacterised protein from bacillus cereus group AQ980_11170 PF02719 Polysaccharide biosynthesis protein AQ980_11170 PF08485 Polysaccharide biosynthesis protein C-terminal AQ980_11175 PF16363 GDP-mannose 4,6 dehydratase AQ980_11185 PF04101 Glycosyltransferase family 28 C-terminal domain AQ980_11185 PF03033 Glycosyltransferase family 28 N-terminal domain AQ980_11190 PF03707 Bacterial signalling protein N terminal repeat AQ980_11190 PF00563 EAL domain AQ980_11190 PF00990 Diguanylate cyclase, GGDEF domain AQ980_11195 PF00561 alpha/beta hydrolase fold AQ980_11210 PF07687 Peptidase dimerisation domain AQ980_11210 PF01546 Peptidase family M20/M25/M40 AQ980_11215 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ980_11215 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AQ980_11220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AQ980_11220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AQ980_11225 PF02805 Metal binding domain of Ada AQ980_11225 PF12833 Helix-turn-helix domain AQ980_11230 PF01497 Periplasmic binding protein AQ980_11235 PF01032 FecCD transport family AQ980_11240 PF01032 FecCD transport family AQ980_11245 PF00005 ABC transporter AQ980_11250 PF00756 Putative esterase AQ980_11260 PF02583 Metal-sensitive transcriptional repressor AQ980_11265 PF00403 Heavy-metal-associated domain AQ980_11270 PF00403 Heavy-metal-associated domain AQ980_11280 PF00216 Bacterial DNA-binding protein AQ980_11285 PF01226 Formate/nitrite transporter AQ980_11290 PF10518 TAT (twin-arginine translocation) pathway signal sequence AQ980_11290 PF00149 Calcineurin-like phosphoesterase AQ980_11295 PF00041 Fibronectin type III domain AQ980_11295 PF00704 Glycosyl hydrolases family 18 AQ980_11300 PF00324 Amino acid permease AQ980_11315 PF04238 Protein of unknown function (DUF420) AQ980_11320 PF00465 Iron-containing alcohol dehydrogenase AQ980_11325 PF00455 DeoR C terminal sensor domain AQ980_11325 PF08220 DeoR-like helix-turn-helix domain AQ980_11330 PF00294 pfkB family carbohydrate kinase AQ980_11335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AQ980_11335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AQ980_11340 PF01476 LysM domain AQ980_11340 PF06725 3D domain AQ980_11355 PF17209 Hfq protein AQ980_11370 PF17866 AAA lid domain AQ980_11370 PF00004 ATPase family associated with various cellular activities (AAA) AQ980_11380 PF03458 UPF0126 domain AQ980_11385 PF01926 50S ribosome-binding GTPase AQ980_11385 PF13167 GTP-binding GTPase N-terminal AQ980_11385 PF16360 GTP-binding GTPase Middle Region AQ980_11390 PF06838 Methionine gamma-lyase AQ980_11395 PF13411 MerR HTH family regulatory protein AQ980_11400 PF00120 Glutamine synthetase, catalytic domain AQ980_11400 PF03951 Glutamine synthetase, beta-Grasp domain AQ980_11405 PF03551 Transcriptional regulator PadR-like family AQ980_11420 PF00717 Peptidase S24-like AQ980_11420 PF01726 LexA DNA binding domain AQ980_11425 PF00239 Resolvase, N terminal domain AQ980_11430 PF05979 Bacterial protein of unknown function (DUF896) AQ980_11440 PF01609 Transposase DDE domain AQ980_11445 PF02872 5'-nucleotidase, C-terminal domain AQ980_11445 PF00149 Calcineurin-like phosphoesterase AQ980_11450 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ980_11455 PF00005 ABC transporter AQ980_11460 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_11465 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_11470 PF00456 Transketolase, thiamine diphosphate binding domain AQ980_11470 PF02779 Transketolase, pyrimidine binding domain AQ980_11470 PF02780 Transketolase, C-terminal domain AQ980_11475 PF10747 Sporulation inhibitor of replication protein SirA AQ980_11480 PF03672 Uncharacterised protein family (UPF0154) AQ980_11485 PF00664 ABC transporter transmembrane region AQ980_11485 PF00005 ABC transporter AQ980_11490 PF00005 ABC transporter AQ980_11490 PF00664 ABC transporter transmembrane region AQ980_11495 PF08239 Bacterial SH3 domain AQ980_11495 PF01183 Glycosyl hydrolases family 25 AQ980_11515 PF01925 Sulfite exporter TauE/SafE AQ980_11525 PF13344 Haloacid dehalogenase-like hydrolase AQ980_11525 PF00293 NUDIX domain AQ980_11530 PF04172 LrgB-like family AQ980_11535 PF03788 LrgA family AQ980_11540 PF03466 LysR substrate binding domain AQ980_11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_11565 PF13276 HTH-like domain AQ980_11565 PF13333 Integrase core domain AQ980_11565 PF00665 Integrase core domain AQ980_11585 PF02683 Cytochrome C biogenesis protein transmembrane region AQ980_11590 PF07301 Protein of unknown function (DUF1453) AQ980_11595 PF11084 Protein of unknown function (DUF2621) AQ980_11620 PF01209 ubiE/COQ5 methyltransferase family AQ980_11625 PF09021 HutP AQ980_11630 PF00221 Aromatic amino acid lyase AQ980_11635 PF17392 Urocanase C-terminal domain AQ980_11635 PF17391 Urocanase N-terminal domain AQ980_11635 PF01175 Urocanase Rossmann-like domain AQ980_11640 PF01979 Amidohydrolase family AQ980_11645 PF00491 Arginase family AQ980_11650 PF02559 CarD-like/TRCF domain AQ980_11660 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_11670 PF01645 Conserved region in glutamate synthase AQ980_11685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_11690 PF01738 Dienelactone hydrolase family AQ980_11695 PF13188 PAS domain AQ980_11695 PF00512 His Kinase A (phospho-acceptor) domain AQ980_11695 PF00989 PAS fold AQ980_11695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_11695 PF13426 PAS domain AQ980_11705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_11705 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_11725 PF00547 Urease, gamma subunit AQ980_11730 PF00699 Urease beta subunit AQ980_11735 PF00449 Urease alpha-subunit, N-terminal domain AQ980_11735 PF01979 Amidohydrolase family AQ980_11740 PF02814 UreE urease accessory protein, N-terminal domain AQ980_11740 PF05194 UreE urease accessory protein, C-terminal domain AQ980_11745 PF01730 UreF AQ980_11750 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ980_11755 PF01774 UreD urease accessory protein AQ980_11760 PF02293 AmiS/UreI family transporter AQ980_11765 PF03824 High-affinity nickel-transport protein AQ980_11770 PF05532 CsbD-like AQ980_11790 PF01381 Helix-turn-helix AQ980_11795 PF00501 AMP-binding enzyme AQ980_11795 PF13193 AMP-binding enzyme C-terminal domain AQ980_11800 PF02632 BioY family AQ980_11805 PF00501 AMP-binding enzyme AQ980_11805 PF13193 AMP-binding enzyme C-terminal domain AQ980_11810 PF02803 Thiolase, C-terminal domain AQ980_11810 PF00108 Thiolase, N-terminal domain AQ980_11820 PF00293 NUDIX domain AQ980_11820 PF13344 Haloacid dehalogenase-like hydrolase AQ980_11825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_11825 PF02272 DHHA1 domain AQ980_11825 PF01411 tRNA synthetases class II (A) AQ980_11835 PF07690 Major Facilitator Superfamily AQ980_11845 PF08179 Small acid-soluble spore protein P family AQ980_11855 PF01522 Polysaccharide deacetylase AQ980_11865 PF00694 Aconitase C-terminal domain AQ980_11865 PF00330 Aconitase family (aconitate hydratase) AQ980_11870 PF00005 ABC transporter AQ980_11870 PF00664 ABC transporter transmembrane region AQ980_11885 PF00578 AhpC/TSA family AQ980_11890 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ980_11890 PF01336 OB-fold nucleic acid binding domain AQ980_11890 PF00929 Exonuclease AQ980_11890 PF02811 PHP domain AQ980_11890 PF14579 Helix-hairpin-helix motif AQ980_11890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ980_11890 PF11490 DNA polymerase III polC-type N-terminus II AQ980_11895 PF13040 Fur-regulated basic protein B AQ980_11900 PF08177 Small acid-soluble spore protein N family AQ980_11910 PF00704 Glycosyl hydrolases family 18 AQ980_11910 PF01476 LysM domain AQ980_11915 PF12323 Helix-turn-helix domain AQ980_11915 PF01385 Probable transposase AQ980_11915 PF07282 Putative transposase DNA-binding domain AQ980_11920 PF03061 Thioesterase superfamily AQ980_11925 PF01521 Iron-sulphur cluster biosynthesis AQ980_11930 PF02660 Glycerol-3-phosphate acyltransferase AQ980_11935 PF03477 ATP cone domain AQ980_11935 PF13597 Anaerobic ribonucleoside-triphosphate reductase AQ980_11940 PF04055 Radical SAM superfamily AQ980_11945 PF00072 Response regulator receiver domain AQ980_11945 PF00486 Transcriptional regulatory protein, C terminal AQ980_11950 PF13180 PDZ domain AQ980_11955 PF13380 CoA binding domain AQ980_11965 PF00986 DNA gyrase B subunit, carboxyl terminus AQ980_11965 PF00204 DNA gyrase B AQ980_11965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_11965 PF01751 Toprim domain AQ980_11970 PF03989 DNA gyrase C-terminal domain, beta-propeller AQ980_11970 PF00521 DNA gyrase/topoisomerase IV, subunit A AQ980_11975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ980_11975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AQ980_11995 PF00005 ABC transporter AQ980_11995 PF13732 Domain of unknown function (DUF4162) AQ980_12005 PF08281 Sigma-70, region 4 AQ980_12005 PF04542 Sigma-70 region 2 AQ980_12015 PF03816 Cell envelope-related transcriptional attenuator domain AQ980_12020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_12025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_12030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_12035 PF08241 Methyltransferase domain AQ980_12070 PF13520 Amino acid permease AQ980_12085 PF03323 Bacillus/Clostridium GerA spore germination protein AQ980_12095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AQ980_12095 PF01568 Molydopterin dinucleotide binding domain AQ980_12095 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AQ980_12095 PF00384 Molybdopterin oxidoreductase AQ980_12095 PF00037 4Fe-4S binding domain AQ980_12100 PF07849 Protein of unknown function (DUF1641) AQ980_12105 PF10057 Uncharacterized conserved protein (DUF2294) AQ980_12110 PF02634 FdhD/NarQ family AQ980_12115 PF06463 Molybdenum Cofactor Synthesis C AQ980_12115 PF04055 Radical SAM superfamily AQ980_12120 PF01226 Formate/nitrite transporter AQ980_12125 PF00899 ThiF family AQ980_12130 PF03453 MoeA N-terminal region (domain I and II) AQ980_12130 PF00994 Probable molybdopterin binding domain AQ980_12130 PF03454 MoeA C-terminal region (domain IV) AQ980_12135 PF02391 MoaE protein AQ980_12145 PF10609 NUBPL iron-transfer P-loop NTPase AQ980_12160 PF06961 Protein of unknown function (DUF1294) AQ980_12165 PF00892 EamA-like transporter family AQ980_12170 PF02681 Divergent PAP2 family AQ980_12175 PF13243 Squalene-hopene cyclase C-terminal domain AQ980_12175 PF13249 Squalene-hopene cyclase N-terminal domain AQ980_12180 PF14151 YfhD-like protein AQ980_12190 PF00171 Aldehyde dehydrogenase family AQ980_12200 PF00474 Sodium:solute symporter family AQ980_12205 PF01156 Inosine-uridine preferring nucleoside hydrolase AQ980_12215 PF14698 Argininosuccinate lyase C-terminal AQ980_12215 PF00206 Lyase AQ980_12225 PF00106 short chain dehydrogenase AQ980_12235 PF00132 Bacterial transferase hexapeptide (six repeats) AQ980_12245 PF00293 NUDIX domain AQ980_12260 PF00258 Flavodoxin AQ980_12270 PF00313 'Cold-shock' DNA-binding domain AQ980_12290 PF13037 Domain of unknown function (DUF3898) AQ980_12290 PF13039 Protein of unknown function (DUF3900) AQ980_12300 PF04294 VanW like protein AQ980_12305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_12315 PF02308 MgtC family AQ980_12320 PF18496 Collagenase G catalytic helper subdomain AQ980_12320 PF08453 Peptidase family M9 N-terminal AQ980_12320 PF01752 Collagenase AQ980_12325 PF00512 His Kinase A (phospho-acceptor) domain AQ980_12325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_12325 PF00989 PAS fold AQ980_12360 PF01609 Transposase DDE domain AQ980_12380 PF00704 Glycosyl hydrolases family 18 AQ980_12380 PF00041 Fibronectin type III domain AQ980_12380 PF00553 Cellulose binding domain AQ980_12390 PF00082 Subtilase family AQ980_12415 PF02743 Cache domain AQ980_12415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_12415 PF00672 HAMP domain AQ980_12425 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_12430 PF16363 GDP-mannose 4,6 dehydratase AQ980_12435 PF01370 NAD dependent epimerase/dehydratase family AQ980_12445 PF00483 Nucleotidyl transferase AQ980_12450 PF01695 IstB-like ATP binding protein AQ980_12455 PF00665 Integrase core domain AQ980_12470 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_12475 PF01609 Transposase DDE domain AQ980_12500 PF03323 Bacillus/Clostridium GerA spore germination protein AQ980_12510 PF18416 N-acetylglucosamine binding protein domain 2 AQ980_12510 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AQ980_12515 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AQ980_12525 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_12530 PF00753 Metallo-beta-lactamase superfamily AQ980_12530 PF00581 Rhodanese-like domain AQ980_12540 PF01066 CDP-alcohol phosphatidyltransferase AQ980_12565 PF01565 FAD binding domain AQ980_12565 PF02913 FAD linked oxidases, C-terminal domain AQ980_12570 PF01758 Sodium Bile acid symporter family AQ980_12580 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_12590 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AQ980_12595 PF00107 Zinc-binding dehydrogenase AQ980_12595 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_12600 PF01022 Bacterial regulatory protein, arsR family AQ980_12610 PF01494 FAD binding domain AQ980_12615 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ980_12625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_12625 PF03466 LysR substrate binding domain AQ980_12640 PF00144 Beta-lactamase AQ980_12645 PF04371 Porphyromonas-type peptidyl-arginine deiminase AQ980_12650 PF06146 Phosphate-starvation-inducible E AQ980_12665 PF04371 Porphyromonas-type peptidyl-arginine deiminase AQ980_12670 PF01432 Peptidase family M3 AQ980_12670 PF08439 Oligopeptidase F AQ980_12675 PF00797 N-acetyltransferase AQ980_12680 PF00128 Alpha amylase, catalytic domain AQ980_12680 PF09154 Domain of unknown function (DUF1939) AQ980_12685 PF00488 MutS domain V AQ980_12685 PF01713 Smr domain AQ980_12700 PF17827 PrmC N-terminal domain AQ980_12700 PF05175 Methyltransferase small domain AQ980_12705 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_12705 PF00107 Zinc-binding dehydrogenase AQ980_12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_12710 PF03466 LysR substrate binding domain AQ980_12720 PF10901 Protein of unknown function (DUF2690) AQ980_12725 PF13302 Acetyltransferase (GNAT) domain AQ980_12740 PF13170 Protein of unknown function (DUF4003) AQ980_12745 PF05675 Protein of unknown function (DUF817) AQ980_12750 PF01032 FecCD transport family AQ980_12755 PF01032 FecCD transport family AQ980_12760 PF01497 Periplasmic binding protein AQ980_12765 PF00583 Acetyltransferase (GNAT) family AQ980_12775 PF03600 Citrate transporter AQ980_12780 PF08830 Protein of unknown function (DUF1806) AQ980_12785 PF02585 GlcNAc-PI de-N-acetylase AQ980_12810 PF07690 Major Facilitator Superfamily AQ980_12815 PF00324 Amino acid permease AQ980_12820 PF00753 Metallo-beta-lactamase superfamily AQ980_12865 PF00753 Metallo-beta-lactamase superfamily AQ980_12870 PF03063 Prismane/CO dehydrogenase family AQ980_12895 PF00005 ABC transporter AQ980_12895 PF13732 Domain of unknown function (DUF4162) AQ980_12900 PF01061 ABC-2 type transporter AQ980_12920 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AQ980_12920 PF00535 Glycosyl transferase family 2 AQ980_12925 PF04542 Sigma-70 region 2 AQ980_12930 PF12791 Anti-sigma factor N-terminus AQ980_12935 PF01522 Polysaccharide deacetylase AQ980_12935 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain AQ980_12940 PF01022 Bacterial regulatory protein, arsR family AQ980_12950 PF01638 HxlR-like helix-turn-helix AQ980_12955 PF02525 Flavodoxin-like fold AQ980_12960 PF00501 AMP-binding enzyme AQ980_12960 PF13193 AMP-binding enzyme C-terminal domain AQ980_12965 PF13302 Acetyltransferase (GNAT) domain AQ980_12980 PF02567 Phenazine biosynthesis-like protein AQ980_13020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AQ980_13020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ980_13025 PF07702 UTRA domain AQ980_13025 PF00392 Bacterial regulatory proteins, gntR family AQ980_13030 PF03960 ArsC family AQ980_13055 PF03928 Haem-degrading AQ980_13065 PF01638 HxlR-like helix-turn-helix AQ980_13070 PF00925 GTP cyclohydrolase II AQ980_13075 PF01872 RibD C-terminal domain AQ980_13075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ980_13080 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AQ980_13085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_13085 PF12729 Four helix bundle sensory module for signal transduction AQ980_13085 PF00672 HAMP domain AQ980_13095 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ980_13095 PF03413 Peptidase propeptide and YPEB domain AQ980_13095 PF01447 Thermolysin metallopeptidase, catalytic domain AQ980_13095 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ980_13100 PF00698 Acyl transferase domain AQ980_13100 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_13100 PF00107 Zinc-binding dehydrogenase AQ980_13100 PF14765 Polyketide synthase dehydratase AQ980_13100 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ980_13100 PF08659 KR domain AQ980_13100 PF00550 Phosphopantetheine attachment site AQ980_13100 PF16197 Ketoacyl-synthetase C-terminal extension AQ980_13100 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ980_13115 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AQ980_13115 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AQ980_13120 PF02780 Transketolase, C-terminal domain AQ980_13120 PF02779 Transketolase, pyrimidine binding domain AQ980_13120 PF00456 Transketolase, thiamine diphosphate binding domain AQ980_13125 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AQ980_13125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ980_13130 PF00923 Transaldolase/Fructose-6-phosphate aldolase AQ980_13135 PF02447 GntP family permease AQ980_13140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ980_13140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ980_13145 PF10282 Lactonase, 7-bladed beta-propeller AQ980_13150 PF06906 Protein of unknown function (DUF1272) AQ980_13155 PF00805 Pentapeptide repeats (8 copies) AQ980_13165 PF00892 EamA-like transporter family AQ980_13180 PF01370 NAD dependent epimerase/dehydratase family AQ980_13185 PF08484 C-methyltransferase C-terminal domain AQ980_13185 PF08421 Putative zinc binding domain AQ980_13190 PF16363 GDP-mannose 4,6 dehydratase AQ980_13195 PF00483 Nucleotidyl transferase AQ980_13205 PF13411 MerR HTH family regulatory protein AQ980_13210 PF03471 Transporter associated domain AQ980_13210 PF01595 Cyclin M transmembrane N-terminal domain AQ980_13210 PF00571 CBS domain AQ980_13220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_13240 PF07690 Major Facilitator Superfamily AQ980_13250 PF08003 Protein of unknown function (DUF1698) AQ980_13275 PF01594 AI-2E family transporter AQ980_13280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AQ980_13280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AQ980_13280 PF13288 DXP reductoisomerase C-terminal domain AQ980_13285 PF00579 tRNA synthetases class I (W and Y) AQ980_13290 PF00293 NUDIX domain AQ980_13290 PF13344 Haloacid dehalogenase-like hydrolase AQ980_13320 PF13419 Haloacid dehalogenase-like hydrolase AQ980_13345 PF00005 ABC transporter AQ980_13375 PF00224 Pyruvate kinase, barrel domain AQ980_13375 PF02887 Pyruvate kinase, alpha/beta domain AQ980_13375 PF00391 PEP-utilising enzyme, mobile domain AQ980_13385 PF00881 Nitroreductase family AQ980_13390 PF01638 HxlR-like helix-turn-helix AQ980_13395 PF13393 Histidyl-tRNA synthetase AQ980_13395 PF03129 Anticodon binding domain AQ980_13400 PF04073 Aminoacyl-tRNA editing domain AQ980_13415 PF03606 C4-dicarboxylate anaerobic carrier AQ980_13420 PF03737 Aldolase/RraA AQ980_13440 PF00005 ABC transporter AQ980_13450 PF14256 YwiC-like protein AQ980_13470 PF02525 Flavodoxin-like fold AQ980_13480 PF02667 Short chain fatty acid transporter AQ980_13495 PF07690 Major Facilitator Superfamily AQ980_13500 PF01047 MarR family AQ980_13505 PF12697 Alpha/beta hydrolase family AQ980_13515 PF07690 Major Facilitator Superfamily AQ980_13520 PF14044 NETI protein AQ980_13525 PF09587 Bacterial capsule synthesis protein PGA_cap AQ980_13530 PF02557 D-alanyl-D-alanine carboxypeptidase AQ980_13555 PF14431 YwqJ-like deaminase AQ980_13555 PF14449 Pre-toxin TG AQ980_13555 PF04740 LXG domain of WXG superfamily AQ980_13565 PF04493 Endonuclease V AQ980_13635 PF01695 IstB-like ATP binding protein AQ980_13640 PF00665 Integrase core domain AQ980_13655 PF00395 S-layer homology domain AQ980_13655 PF01520 N-acetylmuramoyl-L-alanine amidase AQ980_13660 PF01381 Helix-turn-helix AQ980_13675 PF01522 Polysaccharide deacetylase AQ980_13680 PF00440 Bacterial regulatory proteins, tetR family AQ980_13680 PF17932 Tetracyclin repressor-like, C-terminal domain AQ980_13685 PF00733 Asparagine synthase AQ980_13685 PF13537 Glutamine amidotransferase domain AQ980_13700 PF01734 Patatin-like phospholipase AQ980_13700 PF00027 Cyclic nucleotide-binding domain AQ980_13715 PF01842 ACT domain AQ980_13715 PF03315 Serine dehydratase beta chain AQ980_13720 PF03313 Serine dehydratase alpha chain AQ980_13730 PF01609 Transposase DDE domain AQ980_13760 PF00282 Pyridoxal-dependent decarboxylase conserved domain AQ980_13775 PF05504 Spore germination B3/ GerAC like, C-terminal AQ980_13785 PF01098 Cell cycle protein AQ980_13790 PF03448 MgtE intracellular N domain AQ980_13790 PF01769 Divalent cation transporter AQ980_13790 PF00571 CBS domain AQ980_13800 PF05223 NTF2-like N-terminal transpeptidase domain AQ980_13800 PF03717 Penicillin-binding Protein dimerisation domain AQ980_13800 PF00905 Penicillin binding protein transpeptidase domain AQ980_13805 PF08281 Sigma-70, region 4 AQ980_13805 PF04542 Sigma-70 region 2 AQ980_13835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_13835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_13850 PF00005 ABC transporter AQ980_13860 PF00440 Bacterial regulatory proteins, tetR family AQ980_13860 PF08359 YsiA-like protein, C-terminal region AQ980_13875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ980_13875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ980_13875 PF02770 Acyl-CoA dehydrogenase, middle domain AQ980_13880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ980_13880 PF02785 Biotin carboxylase C-terminal domain AQ980_13880 PF00289 Biotin carboxylase, N-terminal domain AQ980_13885 PF00364 Biotin-requiring enzyme AQ980_13890 PF00682 HMGL-like AQ980_13895 PF00378 Enoyl-CoA hydratase/isomerase AQ980_13900 PF01039 Carboxyl transferase domain AQ980_13905 PF00501 AMP-binding enzyme AQ980_13905 PF13193 AMP-binding enzyme C-terminal domain AQ980_13905 PF16177 Acetyl-coenzyme A synthetase N-terminus AQ980_13930 PF01548 Transposase AQ980_13930 PF02371 Transposase IS116/IS110/IS902 family AQ980_13945 PF00485 Phosphoribulokinase / Uridine kinase family AQ980_13960 PF07943 Penicillin-binding protein 5, C-terminal domain AQ980_13960 PF00768 D-alanyl-D-alanine carboxypeptidase AQ980_13965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_13965 PF00512 His Kinase A (phospho-acceptor) domain AQ980_13970 PF01609 Transposase DDE domain AQ980_13975 PF00072 Response regulator receiver domain AQ980_13975 PF00486 Transcriptional regulatory protein, C terminal AQ980_13980 PF01966 HD domain AQ980_13985 PF13021 Domain of unknown function (DUF3885) AQ980_13990 PF01048 Phosphorylase superfamily AQ980_14005 PF03413 Peptidase propeptide and YPEB domain AQ980_14005 PF01447 Thermolysin metallopeptidase, catalytic domain AQ980_14005 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ980_14005 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ980_14010 PF17853 GGDEF-like domain AQ980_14010 PF12833 Helix-turn-helix domain AQ980_14035 PF00665 Integrase core domain AQ980_14040 PF01695 IstB-like ATP binding protein AQ980_14050 PF09278 MerR, DNA binding AQ980_14050 PF00376 MerR family regulatory protein AQ980_14065 PF14552 Tautomerase enzyme AQ980_14070 PF03466 LysR substrate binding domain AQ980_14070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_14080 PF00005 ABC transporter AQ980_14110 PF00155 Aminotransferase class I and II AQ980_14110 PF00392 Bacterial regulatory proteins, gntR family AQ980_14115 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AQ980_14115 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AQ980_14140 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_14145 PF01609 Transposase DDE domain AQ980_14160 PF04239 Protein of unknown function (DUF421) AQ980_14165 PF01965 DJ-1/PfpI family AQ980_14175 PF08450 SMP-30/Gluconolactonase/LRE-like region AQ980_14185 PF01921 tRNA synthetases class I (K) AQ980_14190 PF07486 Cell Wall Hydrolase AQ980_14200 PF00486 Transcriptional regulatory protein, C terminal AQ980_14200 PF00072 Response regulator receiver domain AQ980_14210 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_14230 PF00005 ABC transporter AQ980_14235 PF02687 FtsX-like permease family AQ980_14255 PF03447 Homoserine dehydrogenase, NAD binding domain AQ980_14255 PF00742 Homoserine dehydrogenase AQ980_14255 PF01842 ACT domain AQ980_14260 PF00155 Aminotransferase class I and II AQ980_14260 PF00392 Bacterial regulatory proteins, gntR family AQ980_14265 PF07478 D-ala D-ala ligase C-terminus AQ980_14265 PF01820 D-ala D-ala ligase N-terminus AQ980_14270 PF03070 TENA/THI-4/PQQC family AQ980_14305 PF01548 Transposase AQ980_14305 PF02371 Transposase IS116/IS110/IS902 family AQ980_14330 PF00067 Cytochrome P450 AQ980_14340 PF00132 Bacterial transferase hexapeptide (six repeats) AQ980_14345 PF07561 Domain of Unknown Function (DUF1540) AQ980_14355 PF00067 Cytochrome P450 AQ980_14370 PF00512 His Kinase A (phospho-acceptor) domain AQ980_14370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_14370 PF00989 PAS fold AQ980_14370 PF13188 PAS domain AQ980_14370 PF13426 PAS domain AQ980_14380 PF10502 Signal peptidase, peptidase S26 AQ980_14385 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AQ980_14390 PF01177 Asp/Glu/Hydantoin racemase AQ980_14395 PF07155 ECF-type riboflavin transporter, S component AQ980_14400 PF12558 ATP-binding cassette cobalt transporter AQ980_14400 PF00005 ABC transporter AQ980_14410 PF00512 His Kinase A (phospho-acceptor) domain AQ980_14410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_14415 PF14659 Phage integrase, N-terminal SAM-like domain AQ980_14415 PF00589 Phage integrase family AQ980_14440 PF10676 Spore germination protein gerPA/gerPF AQ980_14450 PF01545 Cation efflux family AQ980_14450 PF16916 Dimerisation domain of Zinc Transporter AQ980_14455 PF10676 Spore germination protein gerPA/gerPF AQ980_14475 PF00072 Response regulator receiver domain AQ980_14475 PF00486 Transcriptional regulatory protein, C terminal AQ980_14480 PF00512 His Kinase A (phospho-acceptor) domain AQ980_14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_14480 PF18719 ArlS sensor domain AQ980_14485 PF00107 Zinc-binding dehydrogenase AQ980_14485 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_14490 PF01569 PAP2 superfamily AQ980_14540 PF07690 Major Facilitator Superfamily AQ980_14545 PF07690 Major Facilitator Superfamily AQ980_14565 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ980_14580 PF00392 Bacterial regulatory proteins, gntR family AQ980_14580 PF00155 Aminotransferase class I and II AQ980_14585 PF00892 EamA-like transporter family AQ980_14590 PF01270 Glycosyl hydrolases family 8 AQ980_14595 PF01156 Inosine-uridine preferring nucleoside hydrolase AQ980_14605 PF01784 NIF3 (NGG1p interacting factor 3) AQ980_14630 PF07690 Major Facilitator Superfamily AQ980_14640 PF00293 NUDIX domain AQ980_14640 PF09297 NADH pyrophosphatase zinc ribbon domain AQ980_14645 PF02768 DNA polymerase III beta subunit, C-terminal domain AQ980_14645 PF02767 DNA polymerase III beta subunit, central domain AQ980_14645 PF00712 DNA polymerase III beta subunit, N-terminal domain AQ980_14655 PF12706 Beta-lactamase superfamily domain AQ980_14670 PF09234 Domain of unknown function (DUF1963) AQ980_14695 PF01734 Patatin-like phospholipase AQ980_14700 PF08000 Bacterial PH domain AQ980_14710 PF12867 DinB superfamily AQ980_14725 PF02673 Bacitracin resistance protein BacA AQ980_14735 PF01541 GIY-YIG catalytic domain AQ980_14755 PF01266 FAD dependent oxidoreductase AQ980_14785 PF00486 Transcriptional regulatory protein, C terminal AQ980_14785 PF00072 Response regulator receiver domain AQ980_14790 PF00989 PAS fold AQ980_14790 PF16736 Single Cache-like AQ980_14790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_14790 PF00512 His Kinase A (phospho-acceptor) domain AQ980_14805 PF00005 ABC transporter AQ980_14810 PF12704 MacB-like periplasmic core domain AQ980_14810 PF02687 FtsX-like permease family AQ980_14820 PF07859 alpha/beta hydrolase fold AQ980_14825 PF00282 Pyridoxal-dependent decarboxylase conserved domain AQ980_14835 PF01526 Tn3 transposase DDE domain AQ980_14835 PF13700 Domain of unknown function (DUF4158) AQ980_14840 PF02796 Helix-turn-helix domain of resolvase AQ980_14840 PF00239 Resolvase, N terminal domain AQ980_14845 PF01695 IstB-like ATP binding protein AQ980_14850 PF00665 Integrase core domain AQ980_14870 PF03714 Bacterial pullanase-associated domain AQ980_14870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AQ980_14870 PF00128 Alpha amylase, catalytic domain AQ980_14875 PF03413 Peptidase propeptide and YPEB domain AQ980_14875 PF01447 Thermolysin metallopeptidase, catalytic domain AQ980_14875 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ980_14875 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ980_14880 PF02872 5'-nucleotidase, C-terminal domain AQ980_14880 PF00149 Calcineurin-like phosphoesterase AQ980_14895 PF00344 SecY translocase AQ980_14900 PF00892 EamA-like transporter family AQ980_14905 PF00155 Aminotransferase class I and II AQ980_14905 PF00392 Bacterial regulatory proteins, gntR family AQ980_14915 PF00561 alpha/beta hydrolase fold AQ980_14940 PF06081 Aromatic acid exporter family member 1 AQ980_14940 PF06081 Aromatic acid exporter family member 1 AQ980_14955 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AQ980_14960 PF14620 YpeB sporulation AQ980_14960 PF03413 Peptidase propeptide and YPEB domain AQ980_14965 PF01471 Putative peptidoglycan binding domain AQ980_14965 PF07486 Cell Wall Hydrolase AQ980_14985 PF03301 Tryptophan 2,3-dioxygenase AQ980_14990 PF04199 Putative cyclase AQ980_14995 PF00266 Aminotransferase class-V AQ980_15000 PF00440 Bacterial regulatory proteins, tetR family AQ980_15000 PF08359 YsiA-like protein, C-terminal region AQ980_15005 PF13344 Haloacid dehalogenase-like hydrolase AQ980_15005 PF00293 NUDIX domain AQ980_15030 PF02954 Bacterial regulatory protein, Fis family AQ980_15030 PF01590 GAF domain AQ980_15030 PF00158 Sigma-54 interaction domain AQ980_15045 PF13302 Acetyltransferase (GNAT) domain AQ980_15065 PF02082 Transcriptional regulator AQ980_15075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_15075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ980_15080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ980_15080 PF02817 e3 binding domain AQ980_15080 PF00364 Biotin-requiring enzyme AQ980_15085 PF02780 Transketolase, C-terminal domain AQ980_15085 PF02779 Transketolase, pyrimidine binding domain AQ980_15090 PF00676 Dehydrogenase E1 component AQ980_15100 PF07690 Major Facilitator Superfamily AQ980_15120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_15125 PF01609 Transposase DDE domain AQ980_15135 PF00106 short chain dehydrogenase AQ980_15140 PF04229 GrpB protein AQ980_15140 PF13673 Acetyltransferase (GNAT) domain AQ980_15180 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_15185 PF00005 ABC transporter AQ980_15185 PF00571 CBS domain AQ980_15190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AQ980_15195 PF00574 Clp protease AQ980_15210 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AQ980_15215 PF13673 Acetyltransferase (GNAT) domain AQ980_15220 PF18416 N-acetylglucosamine binding protein domain 2 AQ980_15220 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AQ980_15225 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AQ980_15230 PF03781 Sulfatase-modifying factor enzyme 1 AQ980_15245 PF10990 Protein of unknown function (DUF2809) AQ980_15250 PF08241 Methyltransferase domain AQ980_15255 PF04237 YjbR AQ980_15300 PF00583 Acetyltransferase (GNAT) family AQ980_15305 PF13538 UvrD-like helicase C-terminal domain AQ980_15315 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AQ980_15320 PF00570 HRDC domain AQ980_15320 PF00271 Helicase conserved C-terminal domain AQ980_15320 PF00270 DEAD/DEAH box helicase AQ980_15320 PF09382 RQC domain AQ980_15320 PF16124 RecQ zinc-binding AQ980_15340 PF00665 Integrase core domain AQ980_15340 PF13276 HTH-like domain AQ980_15340 PF13333 Integrase core domain AQ980_15360 PF13333 Integrase core domain AQ980_15360 PF00665 Integrase core domain AQ980_15370 PF12123 N-acetylmuramoyl-l-alanine amidase AQ980_15370 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_15390 PF02833 DHHA2 domain AQ980_15390 PF01368 DHH family AQ980_15395 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AQ980_15395 PF18416 N-acetylglucosamine binding protein domain 2 AQ980_15410 PF03193 RsgA GTPase AQ980_15415 PF02627 Carboxymuconolactone decarboxylase family AQ980_15420 PF01235 Sodium:alanine symporter family AQ980_15425 PF00171 Aldehyde dehydrogenase family AQ980_15430 PF00701 Dihydrodipicolinate synthetase family AQ980_15435 PF05544 Proline racemase AQ980_15440 PF05544 Proline racemase AQ980_15445 PF01266 FAD dependent oxidoreductase AQ980_15450 PF02954 Bacterial regulatory protein, Fis family AQ980_15450 PF13426 PAS domain AQ980_15450 PF00158 Sigma-54 interaction domain AQ980_15455 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_15455 PF04324 BFD-like [2Fe-2S] binding domain AQ980_15465 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_15465 PF04324 BFD-like [2Fe-2S] binding domain AQ980_15480 PF08876 Domain of unknown function (DUF1836) AQ980_15485 PF09335 SNARE associated Golgi protein AQ980_15495 PF04914 DltD protein AQ980_15505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_15510 PF00877 NlpC/P60 family AQ980_15510 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AQ980_15515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AQ980_15515 PF13378 Enolase C-terminal domain-like AQ980_15530 PF00248 Aldo/keto reductase family AQ980_15535 PF01965 DJ-1/PfpI family AQ980_15565 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AQ980_15565 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AQ980_15575 PF00512 His Kinase A (phospho-acceptor) domain AQ980_15575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_15575 PF00672 HAMP domain AQ980_15580 PF00072 Response regulator receiver domain AQ980_15580 PF00486 Transcriptional regulatory protein, C terminal AQ980_15600 PF01048 Phosphorylase superfamily AQ980_15605 PF03808 Glycosyl transferase WecB/TagA/CpsF family AQ980_15610 PF08439 Oligopeptidase F AQ980_15610 PF01432 Peptidase family M3 AQ980_15615 PF02645 Uncharacterised protein, DegV family COG1307 AQ980_15620 PF07552 Spore Coat Protein X and V domain AQ980_15655 PF07690 Major Facilitator Superfamily AQ980_15665 PF04519 Polymer-forming cytoskeletal AQ980_15670 PF13171 Protein of unknown function (DUF4004) AQ980_15675 PF12793 Sugar transport-related sRNA regulator N-term AQ980_15675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_15680 PF07690 Major Facilitator Superfamily AQ980_15700 PF04226 Transglycosylase associated protein AQ980_15750 PF00155 Aminotransferase class I and II AQ980_15755 PF07977 FabA-like domain AQ980_15760 PF03630 Fumble AQ980_15780 PF00005 ABC transporter AQ980_15835 PF01594 AI-2E family transporter AQ980_15850 PF00296 Luciferase-like monooxygenase AQ980_15855 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_15860 PF09084 NMT1/THI5 like AQ980_15865 PF00005 ABC transporter AQ980_15890 PF02522 Aminoglycoside 3-N-acetyltransferase AQ980_15910 PF13536 Putative multidrug resistance efflux transporter AQ980_15930 PF08713 DNA alkylation repair enzyme AQ980_15935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_15940 PF01522 Polysaccharide deacetylase AQ980_15945 PF03741 Integral membrane protein TerC family AQ980_15950 PF00884 Sulfatase AQ980_15955 PF00005 ABC transporter AQ980_15955 PF12848 ABC transporter AQ980_15965 PF01609 Transposase DDE domain AQ980_15970 PF03176 MMPL family AQ980_15975 PF00440 Bacterial regulatory proteins, tetR family AQ980_15975 PF16295 Tetracyclin repressor-like, C-terminal domain AQ980_15985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AQ980_15990 PF01842 ACT domain AQ980_15990 PF02153 Prephenate dehydrogenase AQ980_15995 PF00155 Aminotransferase class I and II AQ980_16000 PF01264 Chorismate synthase AQ980_16005 PF00793 DAHP synthetase I family AQ980_16005 PF01817 Chorismate mutase type II AQ980_16025 PF01636 Phosphotransferase enzyme family AQ980_16045 PF06725 3D domain AQ980_16045 PF01476 LysM domain AQ980_16055 PF08031 Berberine and berberine like AQ980_16055 PF01565 FAD binding domain AQ980_16070 PF06039 Malate:quinone oxidoreductase (Mqo) AQ980_16075 PF13407 Periplasmic binding protein domain AQ980_16080 PF02653 Branched-chain amino acid transport system / permease component AQ980_16085 PF02653 Branched-chain amino acid transport system / permease component AQ980_16090 PF00005 ABC transporter AQ980_16095 PF04198 Putative sugar-binding domain AQ980_16095 PF00325 Bacterial regulatory proteins, crp family AQ980_16100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ980_16100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ980_16110 PF01791 DeoC/LacD family aldolase AQ980_16125 PF03992 Antibiotic biosynthesis monooxygenase AQ980_16145 PF01773 Na+ dependent nucleoside transporter N-terminus AQ980_16145 PF07662 Na+ dependent nucleoside transporter C-terminus AQ980_16155 PF13276 HTH-like domain AQ980_16155 PF00665 Integrase core domain AQ980_16155 PF13333 Integrase core domain AQ980_16160 PF00171 Aldehyde dehydrogenase family AQ980_16165 PF01472 PUA domain AQ980_16165 PF00696 Amino acid kinase family AQ980_16170 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ980_16170 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ980_16175 PF01546 Peptidase family M20/M25/M40 AQ980_16180 PF01614 Bacterial transcriptional regulator AQ980_16180 PF09339 IclR helix-turn-helix domain AQ980_16185 PF00324 Amino acid permease AQ980_16195 PF00487 Fatty acid desaturase AQ980_16200 PF05547 Immune inhibitor A peptidase M6 AQ980_16205 PF04294 VanW like protein AQ980_16210 PF00245 Alkaline phosphatase AQ980_16215 PF11188 Protein of unknown function (DUF2975) AQ980_16220 PF13443 Cro/C1-type HTH DNA-binding domain AQ980_16240 PF13302 Acetyltransferase (GNAT) domain AQ980_16245 PF12681 Glyoxalase-like domain AQ980_16260 PF00665 Integrase core domain AQ980_16265 PF01695 IstB-like ATP binding protein AQ980_16275 PF07726 ATPase family associated with various cellular activities (AAA) AQ980_16275 PF17863 AAA lid domain AQ980_16290 PF07690 Major Facilitator Superfamily AQ980_16300 PF00535 Glycosyl transferase family 2 AQ980_16320 PF00535 Glycosyl transferase family 2 AQ980_16330 PF00535 Glycosyl transferase family 2 AQ980_16335 PF00535 Glycosyl transferase family 2 AQ980_16345 PF00202 Aminotransferase class-III AQ980_16350 PF00199 Catalase AQ980_16350 PF06628 Catalase-related immune-responsive AQ980_16355 PF04151 Bacterial pre-peptidase C-terminal domain AQ980_16355 PF01752 Collagenase AQ980_16355 PF08453 Peptidase family M9 N-terminal AQ980_16355 PF18496 Collagenase G catalytic helper subdomain AQ980_16365 PF01979 Amidohydrolase family AQ980_16365 PF13382 Adenine deaminase C-terminal domain AQ980_16370 PF00144 Beta-lactamase AQ980_16390 PF17863 AAA lid domain AQ980_16390 PF07726 ATPase family associated with various cellular activities (AAA) AQ980_16450 PF14436 Bacterial EndoU nuclease AQ980_16450 PF04740 LXG domain of WXG superfamily AQ980_16470 PF00881 Nitroreductase family AQ980_16475 PF01047 MarR family AQ980_16480 PF03764 Elongation factor G, domain IV AQ980_16480 PF00009 Elongation factor Tu GTP binding domain AQ980_16480 PF00679 Elongation factor G C-terminus AQ980_16480 PF14492 Elongation Factor G, domain II AQ980_16490 PF00293 NUDIX domain AQ980_16495 PF05406 WGR domain AQ980_16515 PF12833 Helix-turn-helix domain AQ980_16520 PF14437 MafB19-like deaminase AQ980_16520 PF11734 TilS substrate C-terminal domain AQ980_16520 PF01171 PP-loop family AQ980_16525 PF00583 Acetyltransferase (GNAT) family AQ980_16540 PF00892 EamA-like transporter family AQ980_16545 PF00392 Bacterial regulatory proteins, gntR family AQ980_16545 PF00155 Aminotransferase class I and II AQ980_16550 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AQ980_16555 PF13031 Protein of unknown function (DUF3892) AQ980_16585 PF01925 Sulfite exporter TauE/SafE AQ980_16595 PF00324 Amino acid permease AQ980_16630 PF00293 NUDIX domain AQ980_16635 PF10502 Signal peptidase, peptidase S26 AQ980_16650 PF02146 Sir2 family AQ980_16655 PF01470 Pyroglutamyl peptidase AQ980_16670 PF03746 LamB/YcsF family AQ980_16675 PF02626 Carboxyltransferase domain, subdomain A and B AQ980_16680 PF02682 Carboxyltransferase domain, subdomain C and D AQ980_16685 PF01614 Bacterial transcriptional regulator AQ980_16685 PF09339 IclR helix-turn-helix domain AQ980_16690 PF10502 Signal peptidase, peptidase S26 AQ980_16695 PF03932 CutC family AQ980_16710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ980_16710 PF02770 Acyl-CoA dehydrogenase, middle domain AQ980_16710 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AQ980_16735 PF00583 Acetyltransferase (GNAT) family AQ980_16740 PF10903 Protein of unknown function (DUF2691) AQ980_16745 PF02915 Rubrerythrin AQ980_16755 PF13276 HTH-like domain AQ980_16755 PF00665 Integrase core domain AQ980_16755 PF13333 Integrase core domain AQ980_16770 PF00440 Bacterial regulatory proteins, tetR family AQ980_16790 PF01037 Lrp/AsnC ligand binding domain AQ980_16800 PF00753 Metallo-beta-lactamase superfamily AQ980_16805 PF10710 Protein of unknown function (DUF2512) AQ980_16810 PF11553 Protein of unknown function (DUF3231) AQ980_16815 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ980_16820 PF00107 Zinc-binding dehydrogenase AQ980_16820 PF13823 Alcohol dehydrogenase GroES-associated AQ980_16820 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_16825 PF13188 PAS domain AQ980_16825 PF00989 PAS fold AQ980_16825 PF00512 His Kinase A (phospho-acceptor) domain AQ980_16825 PF13426 PAS domain AQ980_16825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_16830 PF05791 Bacillus haemolytic enterotoxin (HBL) AQ980_16835 PF05791 Bacillus haemolytic enterotoxin (HBL) AQ980_16850 PF12833 Helix-turn-helix domain AQ980_16850 PF17853 GGDEF-like domain AQ980_16870 PF17936 Bacterial Ig domain AQ980_16870 PF00149 Calcineurin-like phosphoesterase AQ980_16870 PF02872 5'-nucleotidase, C-terminal domain AQ980_16875 PF00561 alpha/beta hydrolase fold AQ980_16880 PF00857 Isochorismatase family AQ980_16895 PF01979 Amidohydrolase family AQ980_16900 PF03466 LysR substrate binding domain AQ980_16900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_16915 PF08453 Peptidase family M9 N-terminal AQ980_16915 PF01752 Collagenase AQ980_16915 PF18496 Collagenase G catalytic helper subdomain AQ980_16935 PF01544 CorA-like Mg2+ transporter protein AQ980_16950 PF11181 Heat induced stress protein YflT AQ980_16975 PF03073 TspO/MBR family AQ980_16980 PF03441 FAD binding domain of DNA photolyase AQ980_16980 PF00875 DNA photolyase AQ980_17005 PF07859 alpha/beta hydrolase fold AQ980_17015 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AQ980_17020 PF00361 Proton-conducting membrane transporter AQ980_17020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AQ980_17025 PF10057 Uncharacterized conserved protein (DUF2294) AQ980_17030 PF01522 Polysaccharide deacetylase AQ980_17040 PF01040 UbiA prenyltransferase family AQ980_17045 PF12833 Helix-turn-helix domain AQ980_17045 PF01965 DJ-1/PfpI family AQ980_17050 PF12746 GNAT acetyltransferase AQ980_17055 PF01451 Low molecular weight phosphotyrosine protein phosphatase AQ980_17060 PF01758 Sodium Bile acid symporter family AQ980_17065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_17070 PF01022 Bacterial regulatory protein, arsR family AQ980_17080 PF07690 Major Facilitator Superfamily AQ980_17085 PF00440 Bacterial regulatory proteins, tetR family AQ980_17095 PF01037 Lrp/AsnC ligand binding domain AQ980_17110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_17150 PF00196 Bacterial regulatory proteins, luxR family AQ980_17150 PF00072 Response regulator receiver domain AQ980_17175 PF00667 FAD binding domain AQ980_17175 PF00175 Oxidoreductase NAD-binding domain AQ980_17175 PF00067 Cytochrome P450 AQ980_17175 PF00258 Flavodoxin AQ980_17180 PF07690 Major Facilitator Superfamily AQ980_17200 PF00291 Pyridoxal-phosphate dependent enzyme AQ980_17210 PF01139 tRNA-splicing ligase RtcB AQ980_17220 PF04072 Leucine carboxyl methyltransferase AQ980_17235 PF00005 ABC transporter AQ980_17240 PF02687 FtsX-like permease family AQ980_17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_17245 PF00512 His Kinase A (phospho-acceptor) domain AQ980_17245 PF00672 HAMP domain AQ980_17250 PF00486 Transcriptional regulatory protein, C terminal AQ980_17250 PF00072 Response regulator receiver domain AQ980_17255 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_17255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_17285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ980_17285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ980_17285 PF01842 ACT domain AQ980_17290 PF00266 Aminotransferase class-V AQ980_17315 PF13569 Domain of unknown function (DUF4132) AQ980_17325 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_17325 PF01471 Putative peptidoglycan binding domain AQ980_17325 PF01476 LysM domain AQ980_17340 PF00665 Integrase core domain AQ980_17345 PF01695 IstB-like ATP binding protein AQ980_17360 PF05791 Bacillus haemolytic enterotoxin (HBL) AQ980_17385 PF01022 Bacterial regulatory protein, arsR family AQ980_17395 PF00689 Cation transporting ATPase, C-terminus AQ980_17395 PF00690 Cation transporter/ATPase, N-terminus AQ980_17400 PF00571 CBS domain AQ980_17400 PF03448 MgtE intracellular N domain AQ980_17400 PF01769 Divalent cation transporter AQ980_17405 PF13302 Acetyltransferase (GNAT) domain AQ980_17410 PF01348 Type II intron maturase AQ980_17410 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_17450 PF00975 Thioesterase domain AQ980_17455 PF01648 4'-phosphopantetheinyl transferase superfamily AQ980_17460 PF00501 AMP-binding enzyme AQ980_17460 PF13193 AMP-binding enzyme C-terminal domain AQ980_17460 PF00668 Condensation domain AQ980_17460 PF00550 Phosphopantetheine attachment site AQ980_17465 PF00550 Phosphopantetheine attachment site AQ980_17465 PF07993 Male sterility protein AQ980_17465 PF00668 Condensation domain AQ980_17465 PF00501 AMP-binding enzyme AQ980_17465 PF13193 AMP-binding enzyme C-terminal domain AQ980_17470 PF00550 Phosphopantetheine attachment site AQ980_17470 PF00668 Condensation domain AQ980_17470 PF13193 AMP-binding enzyme C-terminal domain AQ980_17470 PF00501 AMP-binding enzyme AQ980_17475 PF07690 Major Facilitator Superfamily AQ980_17485 PF07943 Penicillin-binding protein 5, C-terminal domain AQ980_17485 PF00768 D-alanyl-D-alanine carboxypeptidase AQ980_17490 PF00132 Bacterial transferase hexapeptide (six repeats) AQ980_17495 PF01925 Sulfite exporter TauE/SafE AQ980_17505 PF00665 Integrase core domain AQ980_17505 PF13333 Integrase core domain AQ980_17505 PF13276 HTH-like domain AQ980_17515 PF18277 AbrB C-terminal domain AQ980_17515 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ980_17525 PF00196 Bacterial regulatory proteins, luxR family AQ980_17525 PF00072 Response regulator receiver domain AQ980_17540 PF01546 Peptidase family M20/M25/M40 AQ980_17540 PF07687 Peptidase dimerisation domain AQ980_17560 PF14171 Toxin SpoIISA, type II toxin-antitoxin system AQ980_17565 PF00300 Histidine phosphatase superfamily (branch 1) AQ980_17570 PF01047 MarR family AQ980_17575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ980_17575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ980_17575 PF00205 Thiamine pyrophosphate enzyme, central domain AQ980_17580 PF08241 Methyltransferase domain AQ980_17590 PF09313 Domain of unknown function (DUF1971) AQ980_17590 PF03848 Tellurite resistance protein TehB AQ980_17605 PF17932 Tetracyclin repressor-like, C-terminal domain AQ980_17605 PF00440 Bacterial regulatory proteins, tetR family AQ980_17615 PF00271 Helicase conserved C-terminal domain AQ980_17615 PF00270 DEAD/DEAH box helicase AQ980_17625 PF00753 Metallo-beta-lactamase superfamily AQ980_17625 PF16123 Hydroxyacylglutathione hydrolase C-terminus AQ980_17640 PF07690 Major Facilitator Superfamily AQ980_17645 PF01047 MarR family AQ980_17650 PF00291 Pyridoxal-phosphate dependent enzyme AQ980_17655 PF00266 Aminotransferase class-V AQ980_17660 PF02660 Glycerol-3-phosphate acyltransferase AQ980_17665 PF01869 BadF/BadG/BcrA/BcrD ATPase family AQ980_17680 PF02378 Phosphotransferase system, EIIC AQ980_17690 PF02638 Glycosyl hydrolase-like 10 AQ980_17715 PF04542 Sigma-70 region 2 AQ980_17715 PF08281 Sigma-70, region 4 AQ980_17715 PF12680 SnoaL-like domain AQ980_17720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_17720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ980_17755 PF07883 Cupin domain AQ980_17755 PF01381 Helix-turn-helix AQ980_17760 PF01810 LysE type translocator AQ980_17785 PF00005 ABC transporter AQ980_17785 PF00664 ABC transporter transmembrane region AQ980_17790 PF00005 ABC transporter AQ980_17790 PF00664 ABC transporter transmembrane region AQ980_17805 PF03473 MOSC domain AQ980_17805 PF03475 3-alpha domain AQ980_17810 PF03466 LysR substrate binding domain AQ980_17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_17830 PF02774 Semialdehyde dehydrogenase, dimerisation domain AQ980_17830 PF01118 Semialdehyde dehydrogenase, NAD binding domain AQ980_17835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_17835 PF03466 LysR substrate binding domain AQ980_17855 PF00313 'Cold-shock' DNA-binding domain AQ980_17865 PF13302 Acetyltransferase (GNAT) domain AQ980_17900 PF00583 Acetyltransferase (GNAT) family AQ980_17915 PF00302 Chloramphenicol acetyltransferase AQ980_17925 PF03176 MMPL family AQ980_17935 PF16123 Hydroxyacylglutathione hydrolase C-terminus AQ980_17935 PF00753 Metallo-beta-lactamase superfamily AQ980_17960 PF00027 Cyclic nucleotide-binding domain AQ980_18000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ980_18000 PF00205 Thiamine pyrophosphate enzyme, central domain AQ980_18000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ980_18010 PF00005 ABC transporter AQ980_18015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_18015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ980_18015 PF03129 Anticodon binding domain AQ980_18015 PF02824 TGS domain AQ980_18020 PF00849 RNA pseudouridylate synthase AQ980_18020 PF01479 S4 domain AQ980_18025 PF16291 Domain of unknown function (DUF4937 AQ980_18040 PF01235 Sodium:alanine symporter family AQ980_18045 PF00082 Subtilase family AQ980_18050 PF05163 DinB family AQ980_18060 PF00216 Bacterial DNA-binding protein AQ980_18075 PF07690 Major Facilitator Superfamily AQ980_18080 PF03621 MbtH-like protein AQ980_18085 PF00668 Condensation domain AQ980_18085 PF00501 AMP-binding enzyme AQ980_18085 PF00975 Thioesterase domain AQ980_18085 PF00550 Phosphopantetheine attachment site AQ980_18085 PF13193 AMP-binding enzyme C-terminal domain AQ980_18090 PF00550 Phosphopantetheine attachment site AQ980_18090 PF00857 Isochorismatase family AQ980_18095 PF00501 AMP-binding enzyme AQ980_18095 PF13193 AMP-binding enzyme C-terminal domain AQ980_18100 PF00425 chorismate binding enzyme AQ980_18105 PF00106 short chain dehydrogenase AQ980_18110 PF07690 Major Facilitator Superfamily AQ980_18125 PF01022 Bacterial regulatory protein, arsR family AQ980_18135 PF13476 AAA domain AQ980_18140 PF00149 Calcineurin-like phosphoesterase AQ980_18140 PF12320 Type 5 capsule protein repressor C-terminal domain AQ980_18155 PF00378 Enoyl-CoA hydratase/isomerase AQ980_18160 PF01810 LysE type translocator AQ980_18165 PF00171 Aldehyde dehydrogenase family AQ980_18170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ980_18170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AQ980_18175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ980_18175 PF02770 Acyl-CoA dehydrogenase, middle domain AQ980_18175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ980_18185 PF03972 MmgE/PrpD family AQ980_18190 PF00285 Citrate synthase, C-terminal domain AQ980_18195 PF01521 Iron-sulphur cluster biosynthesis AQ980_18200 PF07690 Major Facilitator Superfamily AQ980_18210 PF00912 Transglycosylase AQ980_18210 PF00905 Penicillin binding protein transpeptidase domain AQ980_18230 PF00106 short chain dehydrogenase AQ980_18245 PF10676 Spore germination protein gerPA/gerPF AQ980_18255 PF01695 IstB-like ATP binding protein AQ980_18260 PF00665 Integrase core domain AQ980_18310 PF00085 Thioredoxin AQ980_18315 PF16916 Dimerisation domain of Zinc Transporter AQ980_18315 PF01545 Cation efflux family AQ980_18320 PF01569 PAP2 superfamily AQ980_18330 PF00069 Protein kinase domain AQ980_18330 PF08239 Bacterial SH3 domain AQ980_18340 PF14162 YozD-like protein AQ980_18355 PF06855 YozE SAM-like fold AQ980_18360 PF14122 YokU-like protein, putative antitoxin AQ980_18365 PF12544 Lysine-2,3-aminomutase AQ980_18370 PF02954 Bacterial regulatory protein, Fis family AQ980_18370 PF00158 Sigma-54 interaction domain AQ980_18370 PF13426 PAS domain AQ980_18375 PF00583 Acetyltransferase (GNAT) family AQ980_18380 PF01546 Peptidase family M20/M25/M40 AQ980_18380 PF07687 Peptidase dimerisation domain AQ980_18385 PF01144 Coenzyme A transferase AQ980_18390 PF01144 Coenzyme A transferase AQ980_18395 PF00202 Aminotransferase class-III AQ980_18405 PF09385 Histidine kinase N terminal AQ980_18410 PF07997 Protein of unknown function (DUF1694) AQ980_18415 PF00171 Aldehyde dehydrogenase family AQ980_18420 PF00571 CBS domain AQ980_18420 PF03471 Transporter associated domain AQ980_18420 PF01595 Cyclin M transmembrane N-terminal domain AQ980_18450 PF13520 Amino acid permease AQ980_18455 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_18460 PF00571 CBS domain AQ980_18460 PF00005 ABC transporter AQ980_18475 PF03358 NADPH-dependent FMN reductase AQ980_18490 PF10924 Protein of unknown function (DUF2711) AQ980_18495 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AQ980_18495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ980_18500 PF02447 GntP family permease AQ980_18505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ980_18505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ980_18520 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_18520 PF00107 Zinc-binding dehydrogenase AQ980_18525 PF02567 Phenazine biosynthesis-like protein AQ980_18530 PF01380 SIS domain AQ980_18530 PF01418 Helix-turn-helix domain, rpiR family AQ980_18535 PF00072 Response regulator receiver domain AQ980_18535 PF00196 Bacterial regulatory proteins, luxR family AQ980_18540 PF13185 GAF domain AQ980_18540 PF07730 Histidine kinase AQ980_18545 PF00924 Mechanosensitive ion channel AQ980_18550 PF00011 Hsp20/alpha crystallin family AQ980_18555 PF00857 Isochorismatase family AQ980_18570 PF00881 Nitroreductase family AQ980_18575 PF01063 Amino-transferase class IV AQ980_18580 PF01497 Periplasmic binding protein AQ980_18600 PF00733 Asparagine synthase AQ980_18600 PF13537 Glutamine amidotransferase domain AQ980_18605 PF00011 Hsp20/alpha crystallin family AQ980_18610 PF02630 SCO1/SenC AQ980_18620 PF02645 Uncharacterised protein, DegV family COG1307 AQ980_18630 PF00902 Sec-independent protein translocase protein (TatC) AQ980_18635 PF02416 mttA/Hcf106 family AQ980_18640 PF03006 Haemolysin-III related AQ980_18645 PF01553 Acyltransferase AQ980_18650 PF02525 Flavodoxin-like fold AQ980_18655 PF05223 NTF2-like N-terminal transpeptidase domain AQ980_18655 PF00905 Penicillin binding protein transpeptidase domain AQ980_18655 PF03717 Penicillin-binding Protein dimerisation domain AQ980_18660 PF00186 Dihydrofolate reductase AQ980_18665 PF00303 Thymidylate synthase AQ980_18670 PF00144 Beta-lactamase AQ980_18670 PF07930 D-aminopeptidase, domain B AQ980_18685 PF13419 Haloacid dehalogenase-like hydrolase AQ980_18690 PF14005 YpjP-like protein AQ980_18695 PF05975 Bacterial ABC transporter protein EcsB AQ980_18700 PF00005 ABC transporter AQ980_18715 PF13443 Cro/C1-type HTH DNA-binding domain AQ980_18720 PF11188 Protein of unknown function (DUF2975) AQ980_18725 PF00583 Acetyltransferase (GNAT) family AQ980_18730 PF01980 tRNA-methyltransferase O AQ980_18735 PF01177 Asp/Glu/Hydantoin racemase AQ980_18740 PF00465 Iron-containing alcohol dehydrogenase AQ980_18755 PF10997 Alternate to MurJ AQ980_18770 PF00209 Sodium:neurotransmitter symporter family AQ980_18775 PF00152 tRNA synthetases class II (D, K and N) AQ980_18775 PF01336 OB-fold nucleic acid binding domain AQ980_18790 PF13276 HTH-like domain AQ980_18790 PF00665 Integrase core domain AQ980_18790 PF13333 Integrase core domain AQ980_18810 PF00133 tRNA synthetases class I (I, L, M and V) AQ980_18810 PF08264 Anticodon-binding domain of tRNA AQ980_18835 PF05746 DALR anticodon binding domain AQ980_18835 PF00750 tRNA synthetases class I (R) AQ980_18835 PF03485 Arginyl tRNA synthetase N terminal domain AQ980_18840 PF04445 Putative SAM-dependent methyltransferase AQ980_18845 PF06491 Disulphide isomerase AQ980_18855 PF08712 Scaffold protein Nfu/NifU N terminal AQ980_18855 PF13769 Virulence factor AQ980_18865 PF00436 Single-strand binding protein family AQ980_18885 PF01381 Helix-turn-helix AQ980_18935 PF00665 Integrase core domain AQ980_18940 PF01695 IstB-like ATP binding protein AQ980_18950 PF01609 Transposase DDE domain AQ980_18960 PF01609 Transposase DDE domain AQ980_18975 PF12848 ABC transporter AQ980_18975 PF16326 ABC transporter C-terminal domain AQ980_18975 PF00005 ABC transporter AQ980_18980 PF01966 HD domain AQ980_18995 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_18995 PF17874 MalT-like TPR region AQ980_19000 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_19000 PF00589 Phage integrase family AQ980_19005 PF00589 Phage integrase family AQ980_19020 PF01925 Sulfite exporter TauE/SafE AQ980_19045 PF04232 Stage V sporulation protein S (SpoVS) AQ980_19080 PF01814 Hemerythrin HHE cation binding domain AQ980_19080 PF04405 Domain of Unknown function (DUF542) AQ980_19085 PF04324 BFD-like [2Fe-2S] binding domain AQ980_19085 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AQ980_19085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_19085 PF18267 Rubredoxin NAD+ reductase C-terminal domain AQ980_19085 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AQ980_19090 PF00355 Rieske [2Fe-2S] domain AQ980_19095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ980_19100 PF01903 CbiX AQ980_19115 PF07690 Major Facilitator Superfamily AQ980_19120 PF02597 ThiS family AQ980_19125 PF02391 MoaE protein AQ980_19130 PF03453 MoeA N-terminal region (domain I and II) AQ980_19130 PF03454 MoeA C-terminal region (domain IV) AQ980_19130 PF00994 Probable molybdopterin binding domain AQ980_19135 PF00899 ThiF family AQ980_19140 PF04055 Radical SAM superfamily AQ980_19140 PF06463 Molybdenum Cofactor Synthesis C AQ980_19145 PF00325 Bacterial regulatory proteins, crp family AQ980_19145 PF00027 Cyclic nucleotide-binding domain AQ980_19150 PF02665 Nitrate reductase gamma subunit AQ980_19155 PF02613 Nitrate reductase delta subunit AQ980_19160 PF13247 4Fe-4S dicluster domain AQ980_19160 PF14711 Respiratory nitrate reductase beta C-terminal AQ980_19165 PF00384 Molybdopterin oxidoreductase AQ980_19165 PF14710 Respiratory nitrate reductase alpha N-terminal AQ980_19165 PF01568 Molydopterin dinucleotide binding domain AQ980_19175 PF07726 ATPase family associated with various cellular activities (AAA) AQ980_19175 PF17863 AAA lid domain AQ980_19180 PF01882 Protein of unknown function DUF58 AQ980_19185 PF13559 Domain of unknown function (DUF4129) AQ980_19185 PF11992 Domain of unknown function (DUF3488) AQ980_19185 PF01841 Transglutaminase-like superfamily AQ980_19190 PF00255 Glutathione peroxidase AQ980_19205 PF01613 Flavin reductase like domain AQ980_19205 PF00258 Flavodoxin AQ980_19220 PF08281 Sigma-70, region 4 AQ980_19220 PF04542 Sigma-70 region 2 AQ980_19230 PF00107 Zinc-binding dehydrogenase AQ980_19230 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_19240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_19245 PF01261 Xylose isomerase-like TIM barrel AQ980_19250 PF00270 DEAD/DEAH box helicase AQ980_19250 PF00271 Helicase conserved C-terminal domain AQ980_19260 PF01268 Formate--tetrahydrofolate ligase AQ980_19265 PF01209 ubiE/COQ5 methyltransferase family AQ980_19290 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AQ980_19380 PF12538 DNA transporter AQ980_19380 PF01580 FtsK/SpoIIIE family AQ980_19385 PF10140 WXG100 protein secretion system (Wss), protein YukC AQ980_19390 PF08817 WXG100 protein secretion system (Wss), protein YukD AQ980_19405 PF06013 Proteins of 100 residues with WXG AQ980_19420 PF00583 Acetyltransferase (GNAT) family AQ980_19450 PF00155 Aminotransferase class I and II AQ980_19450 PF00392 Bacterial regulatory proteins, gntR family AQ980_19455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_19455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_19460 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AQ980_19470 PF00842 Alanine racemase, C-terminal domain AQ980_19470 PF01168 Alanine racemase, N-terminal domain AQ980_19525 PF13457 GW (Gly-Tryp) dipeptide domain AQ980_19525 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AQ980_19535 PF02371 Transposase IS116/IS110/IS902 family AQ980_19535 PF01548 Transposase AQ980_19565 PF01609 Transposase DDE domain AQ980_19570 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_19620 PF00574 Clp protease AQ980_19630 PF03354 Phage Terminase AQ980_19680 PF00589 Phage integrase family AQ980_19755 PF09669 Phage regulatory protein Rha (Phage_pRha) AQ980_19755 PF10549 ORF11CD3 domain AQ980_19790 PF00300 Histidine phosphatase superfamily (branch 1) AQ980_19795 PF07454 Stage II sporulation protein P (SpoIIP) AQ980_19800 PF01145 SPFH domain / Band 7 family AQ980_19810 PF07690 Major Facilitator Superfamily AQ980_19815 PF01425 Amidase AQ980_19825 PF02557 D-alanyl-D-alanine carboxypeptidase AQ980_19835 PF07454 Stage II sporulation protein P (SpoIIP) AQ980_19855 PF01588 Putative tRNA binding domain AQ980_19860 PF05525 Branched-chain amino acid transport protein AQ980_19870 PF13333 Integrase core domain AQ980_19870 PF13276 HTH-like domain AQ980_19870 PF00665 Integrase core domain AQ980_19885 PF03471 Transporter associated domain AQ980_19885 PF01595 Cyclin M transmembrane N-terminal domain AQ980_19885 PF00571 CBS domain AQ980_19890 PF04306 Protein of unknown function (DUF456) AQ980_19895 PF13460 NAD(P)H-binding AQ980_19910 PF13091 PLD-like domain AQ980_19910 PF13396 Phospholipase_D-nuclease N-terminal AQ980_19915 PF03061 Thioesterase superfamily AQ980_19920 PF09323 Domain of unknown function (DUF1980) AQ980_19925 PF03773 Predicted permease AQ980_19935 PF14667 Polysaccharide biosynthesis C-terminal domain AQ980_19935 PF01943 Polysaccharide biosynthesis protein AQ980_19940 PF09335 SNARE associated Golgi protein AQ980_19945 PF00293 NUDIX domain AQ980_19950 PF08757 CotH kinase protein AQ980_19960 PF00300 Histidine phosphatase superfamily (branch 1) AQ980_19970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_19975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_19985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AQ980_19985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AQ980_19990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AQ980_19995 PF13460 NAD(P)H-binding AQ980_20000 PF01609 Transposase DDE domain AQ980_20005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_20025 PF01297 Zinc-uptake complex component A periplasmic AQ980_20030 PF00583 Acetyltransferase (GNAT) family AQ980_20035 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ980_20035 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ980_20045 PF00248 Aldo/keto reductase family AQ980_20050 PF13302 Acetyltransferase (GNAT) domain AQ980_20055 PF01593 Flavin containing amine oxidoreductase AQ980_20065 PF00296 Luciferase-like monooxygenase AQ980_20075 PF13276 HTH-like domain AQ980_20075 PF13333 Integrase core domain AQ980_20075 PF00665 Integrase core domain AQ980_20090 PF00210 Ferritin-like domain AQ980_20115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_20115 PF02743 Cache domain AQ980_20115 PF00672 HAMP domain AQ980_20120 PF03193 RsgA GTPase AQ980_20140 PF05656 Protein of unknown function (DUF805) AQ980_20150 PF07690 Major Facilitator Superfamily AQ980_20155 PF00248 Aldo/keto reductase family AQ980_20160 PF01022 Bacterial regulatory protein, arsR family AQ980_20165 PF00082 Subtilase family AQ980_20170 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ980_20170 PF18277 AbrB C-terminal domain AQ980_20175 PF02687 FtsX-like permease family AQ980_20180 PF02540 NAD synthase AQ980_20185 PF00293 NUDIX domain AQ980_20185 PF13344 Haloacid dehalogenase-like hydrolase AQ980_20210 PF01734 Patatin-like phospholipase AQ980_20220 PF00155 Aminotransferase class I and II AQ980_20220 PF00392 Bacterial regulatory proteins, gntR family AQ980_20225 PF01810 LysE type translocator AQ980_20230 PF07690 Major Facilitator Superfamily AQ980_20235 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ980_20240 PF01261 Xylose isomerase-like TIM barrel AQ980_20255 PF13193 AMP-binding enzyme C-terminal domain AQ980_20255 PF00501 AMP-binding enzyme AQ980_20265 PF00665 Integrase core domain AQ980_20270 PF01695 IstB-like ATP binding protein AQ980_20280 PF06276 Ferric iron reductase FhuF-like transporter AQ980_20280 PF04183 IucA / IucC family AQ980_20285 PF07282 Putative transposase DNA-binding domain AQ980_20285 PF12323 Helix-turn-helix domain AQ980_20285 PF01385 Probable transposase AQ980_20295 PF00583 Acetyltransferase (GNAT) family AQ980_20300 PF02308 MgtC family AQ980_20310 PF01522 Polysaccharide deacetylase AQ980_20315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_20315 PF16736 Single Cache-like AQ980_20315 PF00989 PAS fold AQ980_20315 PF00512 His Kinase A (phospho-acceptor) domain AQ980_20320 PF00072 Response regulator receiver domain AQ980_20320 PF00486 Transcriptional regulatory protein, C terminal AQ980_20330 PF03816 Cell envelope-related transcriptional attenuator domain AQ980_20345 PF00288 GHMP kinases N terminal domain AQ980_20345 PF08544 GHMP kinases C terminal AQ980_20350 PF00291 Pyridoxal-phosphate dependent enzyme AQ980_20355 PF00742 Homoserine dehydrogenase AQ980_20355 PF03447 Homoserine dehydrogenase, NAD binding domain AQ980_20355 PF01842 ACT domain AQ980_20360 PF01548 Transposase AQ980_20360 PF02371 Transposase IS116/IS110/IS902 family AQ980_20380 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain AQ980_20380 PF01522 Polysaccharide deacetylase AQ980_20385 PF04439 Streptomycin adenylyltransferase AQ980_20390 PF00106 short chain dehydrogenase AQ980_20395 PF16736 Single Cache-like AQ980_20395 PF00989 PAS fold AQ980_20395 PF00512 His Kinase A (phospho-acceptor) domain AQ980_20395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_20400 PF00486 Transcriptional regulatory protein, C terminal AQ980_20400 PF00072 Response regulator receiver domain AQ980_20405 PF00005 ABC transporter AQ980_20405 PF00664 ABC transporter transmembrane region AQ980_20415 PF00877 NlpC/P60 family AQ980_20415 PF01476 LysM domain AQ980_20430 PF07943 Penicillin-binding protein 5, C-terminal domain AQ980_20430 PF00768 D-alanyl-D-alanine carboxypeptidase AQ980_20435 PF17676 LD-carboxypeptidase C-terminal domain AQ980_20435 PF02016 LD-carboxypeptidase N-terminal domain AQ980_20460 PF00132 Bacterial transferase hexapeptide (six repeats) AQ980_20465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AQ980_20470 PF00535 Glycosyl transferase family 2 AQ980_20480 PF00664 ABC transporter transmembrane region AQ980_20480 PF00005 ABC transporter AQ980_20485 PF00664 ABC transporter transmembrane region AQ980_20485 PF00005 ABC transporter AQ980_20490 PF02322 Cytochrome bd terminal oxidase subunit II AQ980_20495 PF01654 Cytochrome bd terminal oxidase subunit I AQ980_20505 PF01047 MarR family AQ980_20525 PF03466 LysR substrate binding domain AQ980_20525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_20535 PF02653 Branched-chain amino acid transport system / permease component AQ980_20540 PF00005 ABC transporter AQ980_20545 PF00005 ABC transporter AQ980_20545 PF12399 Branched-chain amino acid ATP-binding cassette transporter AQ980_20555 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ980_20555 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ980_20560 PF01593 Flavin containing amine oxidoreductase AQ980_20565 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AQ980_20565 PF00056 lactate/malate dehydrogenase, NAD binding domain AQ980_20570 PF01594 AI-2E family transporter AQ980_20585 PF00881 Nitroreductase family AQ980_20590 PF01323 DSBA-like thioredoxin domain AQ980_20595 PF02082 Transcriptional regulator AQ980_20600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_20600 PF03466 LysR substrate binding domain AQ980_20605 PF00892 EamA-like transporter family AQ980_20610 PF07987 Domain of unkown function (DUF1775) AQ980_20615 PF05425 Copper resistance protein D AQ980_20615 PF13115 YtkA-like AQ980_20615 PF04234 CopC domain AQ980_20620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_20625 PF05525 Branched-chain amino acid transport protein AQ980_20630 PF02525 Flavodoxin-like fold AQ980_20655 PF07731 Multicopper oxidase AQ980_20655 PF07732 Multicopper oxidase AQ980_20655 PF00394 Multicopper oxidase AQ980_20665 PF00557 Metallopeptidase family M24 AQ980_20665 PF05195 Aminopeptidase P, N-terminal domain AQ980_20670 PF05979 Bacterial protein of unknown function (DUF896) AQ980_20675 PF07301 Protein of unknown function (DUF1453) AQ980_20685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ980_20690 PF02885 Glycosyl transferase family, helical bundle domain AQ980_20690 PF00591 Glycosyl transferase family, a/b domain AQ980_20690 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AQ980_20695 PF01773 Na+ dependent nucleoside transporter N-terminus AQ980_20695 PF07662 Na+ dependent nucleoside transporter C-terminus AQ980_20700 PF01791 DeoC/LacD family aldolase AQ980_20705 PF04198 Putative sugar-binding domain AQ980_20710 PF00440 Bacterial regulatory proteins, tetR family AQ980_20720 PF01906 Putative heavy-metal-binding AQ980_20730 PF05791 Bacillus haemolytic enterotoxin (HBL) AQ980_20735 PF05791 Bacillus haemolytic enterotoxin (HBL) AQ980_20745 PF13520 Amino acid permease AQ980_20755 PF08546 Ketopantoate reductase PanE/ApbA C terminal AQ980_20755 PF02558 Ketopantoate reductase PanE/ApbA AQ980_20770 PF01566 Natural resistance-associated macrophage protein AQ980_20775 PF13302 Acetyltransferase (GNAT) domain AQ980_20780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_20785 PF01979 Amidohydrolase family AQ980_20795 PF13673 Acetyltransferase (GNAT) domain AQ980_20800 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AQ980_20800 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AQ980_20805 PF00072 Response regulator receiver domain AQ980_20805 PF04397 LytTr DNA-binding domain AQ980_20815 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AQ980_20820 PF07690 Major Facilitator Superfamily AQ980_20835 PF09587 Bacterial capsule synthesis protein PGA_cap AQ980_20845 PF00585 C-terminal regulatory domain of Threonine dehydratase AQ980_20845 PF00291 Pyridoxal-phosphate dependent enzyme AQ980_20850 PF00920 Dehydratase family AQ980_20855 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AQ980_20855 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AQ980_20865 PF00205 Thiamine pyrophosphate enzyme, central domain AQ980_20865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ980_20865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ980_20870 PF01063 Amino-transferase class IV AQ980_20880 PF01625 Peptide methionine sulfoxide reductase AQ980_20900 PF04239 Protein of unknown function (DUF421) AQ980_20910 PF00209 Sodium:neurotransmitter symporter family AQ980_20930 PF00291 Pyridoxal-phosphate dependent enzyme AQ980_20935 PF07690 Major Facilitator Superfamily AQ980_20940 PF01926 50S ribosome-binding GTPase AQ980_20940 PF13167 GTP-binding GTPase N-terminal AQ980_20940 PF16360 GTP-binding GTPase Middle Region AQ980_20945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AQ980_20945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AQ980_20950 PF07690 Major Facilitator Superfamily AQ980_20955 PF07690 Major Facilitator Superfamily AQ980_20960 PF10400 Virulence activator alpha C-term AQ980_20960 PF03551 Transcriptional regulator PadR-like family AQ980_20965 PF03976 Polyphosphate kinase 2 (PPK2) AQ980_20975 PF07690 Major Facilitator Superfamily AQ980_20980 PF00293 NUDIX domain AQ980_20980 PF09297 NADH pyrophosphatase zinc ribbon domain AQ980_20985 PF14158 YndJ-like protein AQ980_21005 PF13840 ACT domain AQ980_21005 PF00696 Amino acid kinase family AQ980_21015 PF01381 Helix-turn-helix AQ980_21025 PF00665 Integrase core domain AQ980_21025 PF13333 Integrase core domain AQ980_21030 PF03590 Aspartate-ammonia ligase AQ980_21045 PF04434 SWIM zinc finger AQ980_21045 PF00271 Helicase conserved C-terminal domain AQ980_21045 PF00176 SNF2 family N-terminal domain AQ980_21050 PF00072 Response regulator receiver domain AQ980_21050 PF08664 YcbB domain AQ980_21055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_21060 PF00390 Malic enzyme, N-terminal domain AQ980_21060 PF03949 Malic enzyme, NAD binding domain AQ980_21065 PF10415 Fumarase C C-terminus AQ980_21065 PF00206 Lyase AQ980_21070 PF00375 Sodium:dicarboxylate symporter family AQ980_21080 PF00696 Amino acid kinase family AQ980_21085 PF13091 PLD-like domain AQ980_21105 PF00005 ABC transporter AQ980_21110 PF13185 GAF domain AQ980_21110 PF13492 GAF domain AQ980_21110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_21110 PF07730 Histidine kinase AQ980_21115 PF00072 Response regulator receiver domain AQ980_21115 PF00196 Bacterial regulatory proteins, luxR family AQ980_21140 PF04286 Protein of unknown function (DUF445) AQ980_21145 PF00291 Pyridoxal-phosphate dependent enzyme AQ980_21155 PF01790 Prolipoprotein diacylglyceryl transferase AQ980_21160 PF00578 AhpC/TSA family AQ980_21180 PF03575 Peptidase family S51 AQ980_21185 PF01554 MatE AQ980_21210 PF00206 Lyase AQ980_21210 PF10415 Fumarase C C-terminus AQ980_21220 PF13411 MerR HTH family regulatory protein AQ980_21225 PF03553 Na+/H+ antiporter family AQ980_21240 PF03773 Predicted permease AQ980_21245 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ980_21245 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ980_21255 PF00892 EamA-like transporter family AQ980_21260 PF07729 FCD domain AQ980_21260 PF00392 Bacterial regulatory proteins, gntR family AQ980_21270 PF16916 Dimerisation domain of Zinc Transporter AQ980_21270 PF01545 Cation efflux family AQ980_21290 PF13537 Glutamine amidotransferase domain AQ980_21290 PF00733 Asparagine synthase AQ980_21300 PF01047 MarR family AQ980_21310 PF01548 Transposase AQ980_21310 PF02371 Transposase IS116/IS110/IS902 family AQ980_21315 PF00561 alpha/beta hydrolase fold AQ980_21325 PF00300 Histidine phosphatase superfamily (branch 1) AQ980_21340 PF10787 Uncharacterised protein from bacillus cereus group AQ980_21355 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_21365 PF00005 ABC transporter AQ980_21365 PF08402 TOBE domain AQ980_21390 PF08141 Small acid-soluble spore protein H family AQ980_21430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_21430 PF01411 tRNA synthetases class II (A) AQ980_21430 PF02272 DHHA1 domain AQ980_21435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ980_21435 PF00460 Flagella basal body rod protein AQ980_21440 PF00448 SRP54-type protein, GTPase domain AQ980_21445 PF00771 FHIPEP family AQ980_21450 PF01312 FlhB HrpN YscU SpaS Family AQ980_21460 PF01313 Bacterial export proteins, family 3 AQ980_21465 PF00813 FliP family AQ980_21475 PF04509 CheC-like family AQ980_21475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AQ980_21480 PF02154 Flagellar motor switch protein FliM AQ980_21480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AQ980_21490 PF01464 Transglycosylase SLT domain AQ980_21495 PF00669 Bacterial flagellin N-terminal helical region AQ980_21495 PF00700 Bacterial flagellin C-terminal helical region AQ980_21500 PF00700 Bacterial flagellin C-terminal helical region AQ980_21500 PF00669 Bacterial flagellin N-terminal helical region AQ980_21505 PF00700 Bacterial flagellin C-terminal helical region AQ980_21505 PF00669 Bacterial flagellin N-terminal helical region AQ980_21510 PF00700 Bacterial flagellin C-terminal helical region AQ980_21510 PF00669 Bacterial flagellin N-terminal helical region AQ980_21515 PF12181 DNA binding domain of the motility gene repressor (MogR) AQ980_21520 PF00072 Response regulator receiver domain AQ980_21520 PF01584 CheW-like domain AQ980_21535 PF00460 Flagella basal body rod protein AQ980_21535 PF07559 Flagellar basal body protein FlaE AQ980_21535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ980_21555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ980_21555 PF02874 ATP synthase alpha/beta family, beta-barrel domain AQ980_21555 PF18269 T3SS EscN ATPase C-terminal domain AQ980_21565 PF14841 FliG middle domain AQ980_21565 PF14842 FliG N-terminal domain AQ980_21565 PF01706 FliG C-terminal domain AQ980_21570 PF08345 Flagellar M-ring protein C-terminal AQ980_21570 PF01514 Secretory protein of YscJ/FliF family AQ980_21575 PF02049 Flagellar hook-basal body complex protein FliE AQ980_21580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ980_21580 PF00460 Flagella basal body rod protein AQ980_21585 PF00460 Flagella basal body rod protein AQ980_21605 PF00700 Bacterial flagellin C-terminal helical region AQ980_21605 PF00669 Bacterial flagellin N-terminal helical region AQ980_21610 PF00460 Flagella basal body rod protein AQ980_21610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ980_21630 PF03705 CheR methyltransferase, all-alpha domain AQ980_21630 PF01739 CheR methyltransferase, SAM binding domain AQ980_21645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AQ980_21645 PF04509 CheC-like family AQ980_21650 PF07194 P2 response regulator binding domain AQ980_21650 PF01627 Hpt domain AQ980_21650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_21650 PF01584 CheW-like domain AQ980_21650 PF02895 Signal transducing histidine kinase, homodimeric domain AQ980_21655 PF00072 Response regulator receiver domain AQ980_21660 PF00691 OmpA family AQ980_21660 PF13677 Membrane MotB of proton-channel complex MotA/MotB AQ980_21665 PF01618 MotA/TolQ/ExbB proton channel family AQ980_21675 PF17209 Hfq protein AQ980_21705 PF00881 Nitroreductase family AQ980_21715 PF02698 DUF218 domain AQ980_21720 PF04239 Protein of unknown function (DUF421) AQ980_21730 PF06445 GyrI-like small molecule binding domain AQ980_21730 PF13411 MerR HTH family regulatory protein AQ980_21735 PF17770 Ribonuclease J C-terminal domain AQ980_21735 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AQ980_21735 PF00753 Metallo-beta-lactamase superfamily AQ980_21740 PF00999 Sodium/hydrogen exchanger family AQ980_21750 PF00202 Aminotransferase class-III AQ980_21755 PF00474 Sodium:solute symporter family AQ980_21775 PF01810 LysE type translocator AQ980_21780 PF08892 YqcI/YcgG family AQ980_21785 PF00313 'Cold-shock' DNA-binding domain AQ980_21810 PF01263 Aldose 1-epimerase AQ980_21815 PF13456 Reverse transcriptase-like AQ980_21835 PF13673 Acetyltransferase (GNAT) domain AQ980_21835 PF18014 Acetyltransferase (GNAT) domain AQ980_21850 PF13439 Glycosyltransferase Family 4 AQ980_21850 PF00534 Glycosyl transferases group 1 AQ980_21855 PF00535 Glycosyl transferase family 2 AQ980_21870 PF02397 Bacterial sugar transferase AQ980_21880 PF02706 Chain length determinant protein AQ980_21880 PF13807 G-rich domain on putative tyrosine kinase AQ980_21895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AQ980_21895 PF01367 5'-3' exonuclease, C-terminal SAM fold AQ980_21900 PF00690 Cation transporter/ATPase, N-terminus AQ980_21900 PF00689 Cation transporting ATPase, C-terminus AQ980_21925 PF00581 Rhodanese-like domain AQ980_21930 PF10752 Protein of unknown function (DUF2533) AQ980_21935 PF00583 Acetyltransferase (GNAT) family AQ980_21945 PF00350 Dynamin family AQ980_21950 PF04235 Protein of unknown function (DUF418) AQ980_21955 PF00860 Permease family AQ980_21960 PF00156 Phosphoribosyl transferase domain AQ980_21965 PF00557 Metallopeptidase family M24 AQ980_21975 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AQ980_21980 PF13307 Helicase C-terminal domain AQ980_21990 PF01170 Putative RNA methylase family UPF0020 AQ980_21990 PF02926 THUMP domain AQ980_21995 PF05103 DivIVA protein AQ980_22000 PF06908 YspA SLOG family AQ980_22030 PF10720 Protein of unknown function (DUF2515) AQ980_22035 PF03838 Recombination protein U AQ980_22040 PF00905 Penicillin binding protein transpeptidase domain AQ980_22040 PF00912 Transglycosylase AQ980_22050 PF10576 Iron-sulfur binding domain of endonuclease III AQ980_22050 PF00633 Helix-hairpin-helix motif AQ980_22050 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ980_22055 PF07261 Replication initiation and membrane attachment AQ980_22060 PF00155 Aminotransferase class I and II AQ980_22070 PF14084 Protein of unknown function (DUF4264) AQ980_22075 PF00929 Exonuclease AQ980_22075 PF04851 Type III restriction enzyme, res subunit AQ980_22075 PF13307 Helicase C-terminal domain AQ980_22080 PF02261 Aspartate decarboxylase AQ980_22085 PF02569 Pantoate-beta-alanine ligase AQ980_22090 PF02548 Ketopantoate hydroxymethyltransferase AQ980_22105 PF02237 Biotin protein ligase C terminal domain AQ980_22105 PF03099 Biotin/lipoate A/B protein ligase family AQ980_22105 PF08279 HTH domain AQ980_22110 PF01743 Poly A polymerase head domain AQ980_22110 PF13735 tRNA nucleotidyltransferase domain 2 putative AQ980_22110 PF12627 Probable RNA and SrmB- binding site of polymerase A AQ980_22115 PF00534 Glycosyl transferases group 1 AQ980_22115 PF13439 Glycosyltransferase Family 4 AQ980_22120 PF02585 GlcNAc-PI de-N-acetylase AQ980_22125 PF02142 MGS-like domain AQ980_22130 PF01113 Dihydrodipicolinate reductase, N-terminus AQ980_22130 PF05173 Dihydrodipicolinate reductase, C-terminus AQ980_22135 PF03819 MazG nucleotide pyrophosphohydrolase domain AQ980_22140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_22140 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_22150 PF13333 Integrase core domain AQ980_22150 PF00665 Integrase core domain AQ980_22150 PF13276 HTH-like domain AQ980_22160 PF04298 Putative neutral zinc metallopeptidase AQ980_22165 PF09577 Sporulation protein YpjB (SpoYpjB) AQ980_22175 PF07187 Protein of unknown function (DUF1405) AQ980_22180 PF00032 Cytochrome b(C-terminal)/b6/petD AQ980_22180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AQ980_22185 PF00033 Cytochrome b/b6/petB AQ980_22190 PF00355 Rieske [2Fe-2S] domain AQ980_22195 PF10673 Protein of unknown function (DUF2487) AQ980_22200 PF08858 IDEAL domain AQ980_22200 PF08864 UPF0302 domain AQ980_22210 PF00155 Aminotransferase class I and II AQ980_22215 PF01609 Transposase DDE domain AQ980_22220 PF01761 3-dehydroquinate synthase AQ980_22225 PF01264 Chorismate synthase AQ980_22230 PF00334 Nucleoside diphosphate kinase AQ980_22235 PF00348 Polyprenyl synthetase AQ980_22240 PF01209 ubiE/COQ5 methyltransferase family AQ980_22245 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 AQ980_22250 PF01227 GTP cyclohydrolase I AQ980_22255 PF00216 Bacterial DNA-binding protein AQ980_22260 PF09547 Stage IV sporulation protein A (spore_IV_A) AQ980_22270 PF10966 Protein of unknown function (DUF2768) AQ980_22280 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AQ980_22280 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AQ980_22285 PF01926 50S ribosome-binding GTPase AQ980_22285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AQ980_22295 PF14045 YIEGIA protein AQ980_22305 PF14140 YpzI-like protein AQ980_22310 PF01070 FMN-dependent dehydrogenase AQ980_22315 PF00575 S1 RNA binding domain AQ980_22320 PF02224 Cytidylate kinase AQ980_22330 PF00710 Asparaginase, N-terminal AQ980_22330 PF17763 Glutaminase/Asparaginase C-terminal domain AQ980_22355 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ980_22355 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AQ980_22360 PF05389 Negative regulator of genetic competence (MecA) AQ980_22365 PF13411 MerR HTH family regulatory protein AQ980_22370 PF00149 Calcineurin-like phosphoesterase AQ980_22380 PF02517 CPBP intramembrane metalloprotease AQ980_22385 PF00270 DEAD/DEAH box helicase AQ980_22385 PF00271 Helicase conserved C-terminal domain AQ980_22400 PF12822 ECF transporter, substrate-specific component AQ980_22415 PF01923 Cobalamin adenosyltransferase AQ980_22420 PF00989 PAS fold AQ980_22420 PF18698 Histidine kinase sensor domain AQ980_22420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_22420 PF00672 HAMP domain AQ980_22420 PF00512 His Kinase A (phospho-acceptor) domain AQ980_22425 PF00072 Response regulator receiver domain AQ980_22425 PF00486 Transcriptional regulatory protein, C terminal AQ980_22430 PF01578 Cytochrome C assembly protein AQ980_22435 PF05140 ResB-like family AQ980_22440 PF00578 AhpC/TSA family AQ980_22445 PF00849 RNA pseudouridylate synthase AQ980_22445 PF01479 S4 domain AQ980_22450 PF07670 Nucleoside recognition AQ980_22455 PF07670 Nucleoside recognition AQ980_22460 PF07943 Penicillin-binding protein 5, C-terminal domain AQ980_22460 PF00768 D-alanyl-D-alanine carboxypeptidase AQ980_22465 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AQ980_22465 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AQ980_22480 PF09924 Uncharacterised conserved protein (DUF2156) AQ980_22480 PF03706 Lysylphosphatidylglycerol synthase TM region AQ980_22490 PF01048 Phosphorylase superfamily AQ980_22495 PF00512 His Kinase A (phospho-acceptor) domain AQ980_22495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_22495 PF16736 Single Cache-like AQ980_22495 PF00989 PAS fold AQ980_22500 PF00589 Phage integrase family AQ980_22510 PF01904 Protein of unknown function DUF72 AQ980_22515 PF00512 His Kinase A (phospho-acceptor) domain AQ980_22515 PF00989 PAS fold AQ980_22515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_22530 PF00912 Transglycosylase AQ980_22530 PF00905 Penicillin binding protein transpeptidase domain AQ980_22535 PF01865 Protein of unknown function DUF47 AQ980_22540 PF01384 Phosphate transporter family AQ980_22545 PF01925 Sulfite exporter TauE/SafE AQ980_22565 PF00042 Globin AQ980_22565 PF00970 Oxidoreductase FAD-binding domain AQ980_22565 PF00175 Oxidoreductase NAD-binding domain AQ980_22590 PF01209 ubiE/COQ5 methyltransferase family AQ980_22600 PF05525 Branched-chain amino acid transport protein AQ980_22610 PF00196 Bacterial regulatory proteins, luxR family AQ980_22610 PF00072 Response regulator receiver domain AQ980_22615 PF07730 Histidine kinase AQ980_22615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_22615 PF00672 HAMP domain AQ980_22620 PF09922 Cell wall-active antibiotics response 4TMS YvqF AQ980_22635 PF03553 Na+/H+ antiporter family AQ980_22645 PF00375 Sodium:dicarboxylate symporter family AQ980_22655 PF00209 Sodium:neurotransmitter symporter family AQ980_22670 PF01903 CbiX AQ980_22675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ980_22685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AQ980_22685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AQ980_22695 PF14306 PUA-like domain AQ980_22695 PF01747 ATP-sulfurylase AQ980_22700 PF01507 Phosphoadenosine phosphosulfate reductase family AQ980_22710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AQ980_22710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AQ980_22720 PF00884 Sulfatase AQ980_22725 PF01066 CDP-alcohol phosphatidyltransferase AQ980_22730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ980_22730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ980_22740 PF02811 PHP domain AQ980_22745 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AQ980_22750 PF01502 Phosphoribosyl-AMP cyclohydrolase AQ980_22755 PF00977 Histidine biosynthesis protein AQ980_22760 PF00977 Histidine biosynthesis protein AQ980_22765 PF00117 Glutamine amidotransferase class-I AQ980_22770 PF00475 Imidazoleglycerol-phosphate dehydratase AQ980_22775 PF00815 Histidinol dehydrogenase AQ980_22780 PF01634 ATP phosphoribosyltransferase AQ980_22785 PF13393 Histidyl-tRNA synthetase AQ980_22790 PF00694 Aconitase C-terminal domain AQ980_22795 PF00330 Aconitase family (aconitate hydratase) AQ980_22800 PF00180 Isocitrate/isopropylmalate dehydrogenase AQ980_22805 PF08502 LeuA allosteric (dimerisation) domain AQ980_22805 PF00682 HMGL-like AQ980_22810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AQ980_22810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AQ980_22815 PF01842 ACT domain AQ980_22815 PF10369 Small subunit of acetolactate synthase AQ980_22820 PF00205 Thiamine pyrophosphate enzyme, central domain AQ980_22820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ980_22820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ980_22825 PF01063 Amino-transferase class IV AQ980_22840 PF03698 Uncharacterised protein family (UPF0180) AQ980_22855 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AQ980_22865 PF02386 Cation transport protein AQ980_22870 PF00375 Sodium:dicarboxylate symporter family AQ980_22880 PF01047 MarR family AQ980_22890 PF02673 Bacitracin resistance protein BacA AQ980_22895 PF01554 MatE AQ980_22915 PF01636 Phosphotransferase enzyme family AQ980_22930 PF00258 Flavodoxin AQ980_22940 PF01546 Peptidase family M20/M25/M40 AQ980_22940 PF07687 Peptidase dimerisation domain AQ980_22950 PF13193 AMP-binding enzyme C-terminal domain AQ980_22950 PF00501 AMP-binding enzyme AQ980_22955 PF03062 MBOAT, membrane-bound O-acyltransferase family AQ980_22960 PF00550 Phosphopantetheine attachment site AQ980_22965 PF04914 DltD protein AQ980_22970 PF03060 Nitronate monooxygenase AQ980_22975 PF02016 LD-carboxypeptidase N-terminal domain AQ980_22975 PF17676 LD-carboxypeptidase C-terminal domain AQ980_22985 PF00857 Isochorismatase family AQ980_22995 PF01037 Lrp/AsnC ligand binding domain AQ980_23015 PF00005 ABC transporter AQ980_23025 PF00005 ABC transporter AQ980_23030 PF00392 Bacterial regulatory proteins, gntR family AQ980_23045 PF00317 Ribonucleotide reductase, all-alpha domain AQ980_23045 PF08343 Ribonucleotide reductase N-terminal AQ980_23045 PF02867 Ribonucleotide reductase, barrel domain AQ980_23050 PF07972 NrdI Flavodoxin like AQ980_23090 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) AQ980_23095 PF14489 QueF-like protein AQ980_23100 PF04055 Radical SAM superfamily AQ980_23105 PF01242 6-pyruvoyl tetrahydropterin synthase AQ980_23110 PF06508 Queuosine biosynthesis protein QueC AQ980_23115 PF13426 PAS domain AQ980_23115 PF13188 PAS domain AQ980_23115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_23115 PF00989 PAS fold AQ980_23115 PF00512 His Kinase A (phospho-acceptor) domain AQ980_23125 PF12867 DinB superfamily AQ980_23135 PF01047 MarR family AQ980_23140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_23140 PF02743 Cache domain AQ980_23140 PF00512 His Kinase A (phospho-acceptor) domain AQ980_23145 PF09388 Spo0E like sporulation regulatory protein AQ980_23150 PF04748 Divergent polysaccharide deacetylase AQ980_23160 PF00596 Class II Aldolase and Adducin N-terminal domain AQ980_23175 PF00455 DeoR C terminal sensor domain AQ980_23175 PF08220 DeoR-like helix-turn-helix domain AQ980_23185 PF00266 Aminotransferase class-V AQ980_23190 PF13419 Haloacid dehalogenase-like hydrolase AQ980_23195 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_23200 PF00005 ABC transporter AQ980_23200 PF08402 TOBE domain AQ980_23220 PF02386 Cation transport protein AQ980_23230 PF00561 alpha/beta hydrolase fold AQ980_23255 PF01575 MaoC like domain AQ980_23260 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ980_23265 PF02386 Cation transport protein AQ980_23270 PF03741 Integral membrane protein TerC family AQ980_23275 PF01226 Formate/nitrite transporter AQ980_23285 PF01478 Type IV leader peptidase family AQ980_23285 PF06750 Bacterial Peptidase A24 N-terminal domain AQ980_23290 PF02589 LUD domain AQ980_23295 PF11870 Domain of unknown function (DUF3390) AQ980_23295 PF02589 LUD domain AQ980_23295 PF13183 4Fe-4S dicluster domain AQ980_23300 PF02754 Cysteine-rich domain AQ980_23305 PF00392 Bacterial regulatory proteins, gntR family AQ980_23305 PF07729 FCD domain AQ980_23310 PF00672 HAMP domain AQ980_23310 PF00989 PAS fold AQ980_23310 PF00512 His Kinase A (phospho-acceptor) domain AQ980_23310 PF18698 Histidine kinase sensor domain AQ980_23310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_23315 PF00486 Transcriptional regulatory protein, C terminal AQ980_23315 PF00072 Response regulator receiver domain AQ980_23325 PF13556 PucR C-terminal helix-turn-helix domain AQ980_23325 PF17853 GGDEF-like domain AQ980_23325 PF05651 Putative sugar diacid recognition AQ980_23330 PF01565 FAD binding domain AQ980_23330 PF02913 FAD linked oxidases, C-terminal domain AQ980_23335 PF13183 4Fe-4S dicluster domain AQ980_23335 PF02754 Cysteine-rich domain AQ980_23340 PF00188 Cysteine-rich secretory protein family AQ980_23350 PF00849 RNA pseudouridylate synthase AQ980_23350 PF01479 S4 domain AQ980_23360 PF03176 MMPL family AQ980_23370 PF13416 Bacterial extracellular solute-binding protein AQ980_23375 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_23380 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_23385 PF00005 ABC transporter AQ980_23385 PF08402 TOBE domain AQ980_23390 PF00171 Aldehyde dehydrogenase family AQ980_23395 PF05547 Immune inhibitor A peptidase M6 AQ980_23405 PF08671 Anti-repressor SinI AQ980_23405 PF01381 Helix-turn-helix AQ980_23410 PF12389 Camelysin metallo-endopeptidase AQ980_23420 PF12389 Camelysin metallo-endopeptidase AQ980_23430 PF00768 D-alanyl-D-alanine carboxypeptidase AQ980_23430 PF07943 Penicillin-binding protein 5, C-terminal domain AQ980_23440 PF13649 Methyltransferase domain AQ980_23465 PF00005 ABC transporter AQ980_23465 PF13732 Domain of unknown function (DUF4162) AQ980_23480 PF00665 Integrase core domain AQ980_23480 PF13333 Integrase core domain AQ980_23515 PF01381 Helix-turn-helix AQ980_23520 PF02779 Transketolase, pyrimidine binding domain AQ980_23520 PF16870 2-oxoglutarate dehydrogenase C-terminal AQ980_23520 PF00676 Dehydrogenase E1 component AQ980_23525 PF02817 e3 binding domain AQ980_23525 PF00364 Biotin-requiring enzyme AQ980_23525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ980_23540 PF00881 Nitroreductase family AQ980_23545 PF01209 ubiE/COQ5 methyltransferase family AQ980_23550 PF00665 Integrase core domain AQ980_23550 PF13276 HTH-like domain AQ980_23550 PF13333 Integrase core domain AQ980_23570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ980_23570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_23595 PF10042 Uncharacterized conserved protein (DUF2278) AQ980_23600 PF02652 L-lactate permease AQ980_23610 PF00290 Tryptophan synthase alpha chain AQ980_23615 PF00291 Pyridoxal-phosphate dependent enzyme AQ980_23620 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AQ980_23625 PF00218 Indole-3-glycerol phosphate synthase AQ980_23630 PF00591 Glycosyl transferase family, a/b domain AQ980_23630 PF02885 Glycosyl transferase family, helical bundle domain AQ980_23635 PF00591 Glycosyl transferase family, a/b domain AQ980_23635 PF00117 Glutamine amidotransferase class-I AQ980_23635 PF02885 Glycosyl transferase family, helical bundle domain AQ980_23650 PF00474 Sodium:solute symporter family AQ980_23655 PF02368 Bacterial Ig-like domain (group 2) AQ980_23675 PF00756 Putative esterase AQ980_23685 PF13673 Acetyltransferase (GNAT) domain AQ980_23690 PF13361 UvrD-like helicase C-terminal domain AQ980_23690 PF00580 UvrD/REP helicase N-terminal domain AQ980_23710 PF07098 Protein of unknown function (DUF1360) AQ980_23730 PF04321 RmlD substrate binding domain AQ980_23735 PF16363 GDP-mannose 4,6 dehydratase AQ980_23740 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AQ980_23745 PF00483 Nucleotidyl transferase AQ980_23765 PF13181 Tetratricopeptide repeat AQ980_23765 PF00535 Glycosyl transferase family 2 AQ980_23775 PF05711 Macrocin-O-methyltransferase (TylF) AQ980_23780 PF08241 Methyltransferase domain AQ980_23785 PF00535 Glycosyl transferase family 2 AQ980_23790 PF01098 Cell cycle protein AQ980_23795 PF00149 Calcineurin-like phosphoesterase AQ980_23805 PF00849 RNA pseudouridylate synthase AQ980_23810 PF01513 ATP-NAD kinase AQ980_23815 PF04607 Region found in RelA / SpoT proteins AQ980_23825 PF01928 CYTH domain AQ980_23830 PF01152 Bacterial-like globin AQ980_23845 PF01432 Peptidase family M3 AQ980_23845 PF08439 Oligopeptidase F AQ980_23855 PF13396 Phospholipase_D-nuclease N-terminal AQ980_23855 PF13091 PLD-like domain AQ980_23860 PF05389 Negative regulator of genetic competence (MecA) AQ980_23865 PF03741 Integral membrane protein TerC family AQ980_23870 PF03960 ArsC family AQ980_23885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_23890 PF01554 MatE AQ980_23895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ980_23895 PF00005 ABC transporter AQ980_23900 PF00005 ABC transporter AQ980_23900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ980_23905 PF12911 N-terminal TM domain of oligopeptide transport permease C AQ980_23905 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_23910 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_23915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_23930 PF00579 tRNA synthetases class I (W and Y) AQ980_23940 PF12227 Protein of unknown function (DUF3603) AQ980_23945 PF10026 Predicted Zn-dependent protease (DUF2268) AQ980_23950 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ980_23950 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ980_23955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AQ980_23955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AQ980_23960 PF10815 ComZ AQ980_23980 PF07724 AAA domain (Cdc48 subfamily) AQ980_23980 PF00004 ATPase family associated with various cellular activities (AAA) AQ980_23980 PF17871 AAA lid domain AQ980_23980 PF02861 Clp amino terminal domain, pathogenicity island component AQ980_23980 PF10431 C-terminal, D2-small domain, of ClpB protein AQ980_23985 PF14168 YjzC-like protein AQ980_24005 PF12758 Protein of unknown function (DUF3813) AQ980_24010 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ980_24010 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ980_24035 PF17783 CvfB-like winged helix domain AQ980_24035 PF13509 S1 domain AQ980_24040 PF04461 Protein of unknown function (DUF520) AQ980_24050 PF00128 Alpha amylase, catalytic domain AQ980_24055 PF00909 Ammonium Transporter Family AQ980_24060 PF06803 Protein of unknown function (DUF1232) AQ980_24085 PF00690 Cation transporter/ATPase, N-terminus AQ980_24085 PF00689 Cation transporting ATPase, C-terminus AQ980_24095 PF00199 Catalase AQ980_24095 PF06628 Catalase-related immune-responsive AQ980_24105 PF00733 Asparagine synthase AQ980_24105 PF13537 Glutamine amidotransferase domain AQ980_24130 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_24130 PF01476 LysM domain AQ980_24130 PF01471 Putative peptidoglycan binding domain AQ980_24135 PF05105 Bacteriophage holin family AQ980_24205 PF02371 Transposase IS116/IS110/IS902 family AQ980_24205 PF01548 Transposase AQ980_24240 PF02371 Transposase IS116/IS110/IS902 family AQ980_24240 PF01548 Transposase AQ980_24260 PF03838 Recombination protein U AQ980_24355 PF00717 Peptidase S24-like AQ980_24355 PF01726 LexA DNA binding domain AQ980_24365 PF00239 Resolvase, N terminal domain AQ980_24365 PF02796 Helix-turn-helix domain of resolvase AQ980_24370 PF00733 Asparagine synthase AQ980_24370 PF13537 Glutamine amidotransferase domain AQ980_24385 PF00202 Aminotransferase class-III AQ980_24395 PF01557 Fumarylacetoacetate (FAA) hydrolase family AQ980_24400 PF09388 Spo0E like sporulation regulatory protein AQ980_24405 PF10676 Spore germination protein gerPA/gerPF AQ980_24410 PF10803 Spore germination GerPB AQ980_24415 PF10737 Spore germination protein GerPC AQ980_24425 PF10970 Spore germination protein GerPE AQ980_24430 PF10676 Spore germination protein gerPA/gerPF AQ980_24440 PF00580 UvrD/REP helicase N-terminal domain AQ980_24440 PF13361 UvrD-like helicase C-terminal domain AQ980_24440 PF12705 PD-(D/E)XK nuclease superfamily AQ980_24445 PF13361 UvrD-like helicase C-terminal domain AQ980_24445 PF12705 PD-(D/E)XK nuclease superfamily AQ980_24450 PF10502 Signal peptidase, peptidase S26 AQ980_24455 PF09335 SNARE associated Golgi protein AQ980_24475 PF00313 'Cold-shock' DNA-binding domain AQ980_24490 PF00463 Isocitrate lyase family AQ980_24495 PF01274 Malate synthase AQ980_24505 PF00331 Glycosyl hydrolase family 10 AQ980_24505 PF00395 S-layer homology domain AQ980_24505 PF02018 Carbohydrate binding domain AQ980_24505 PF06452 Carbohydrate family 9 binding domain-like AQ980_24510 PF02743 Cache domain AQ980_24510 PF00672 HAMP domain AQ980_24510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_24515 PF01435 Peptidase family M48 AQ980_24515 PF16491 CAAX prenyl protease N-terminal, five membrane helices AQ980_24535 PF00486 Transcriptional regulatory protein, C terminal AQ980_24535 PF00072 Response regulator receiver domain AQ980_24550 PF06445 GyrI-like small molecule binding domain AQ980_24550 PF12833 Helix-turn-helix domain AQ980_24555 PF08281 Sigma-70, region 4 AQ980_24555 PF04542 Sigma-70 region 2 AQ980_24565 PF01966 HD domain AQ980_24570 PF00149 Calcineurin-like phosphoesterase AQ980_24575 PF12146 Serine aminopeptidase, S33 AQ980_24585 PF07968 Leukocidin/Hemolysin toxin family AQ980_24660 PF00005 ABC transporter AQ980_24660 PF17850 CysA C-terminal regulatory domain AQ980_24660 PF12857 TOBE-like domain AQ980_24665 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_24670 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_24680 PF01520 N-acetylmuramoyl-L-alanine amidase AQ980_24680 PF00395 S-layer homology domain AQ980_24685 PF00501 AMP-binding enzyme AQ980_24685 PF13193 AMP-binding enzyme C-terminal domain AQ980_24700 PF03099 Biotin/lipoate A/B protein ligase family AQ980_24700 PF10437 Bacterial lipoate protein ligase C-terminus AQ980_24705 PF12706 Beta-lactamase superfamily domain AQ980_24710 PF14149 YhfH-like protein AQ980_24715 PF00356 Bacterial regulatory proteins, lacI family AQ980_24720 PF13302 Acetyltransferase (GNAT) domain AQ980_24755 PF00440 Bacterial regulatory proteins, tetR family AQ980_24755 PF17932 Tetracyclin repressor-like, C-terminal domain AQ980_24765 PF03965 Penicillinase repressor AQ980_24800 PF01208 Uroporphyrinogen decarboxylase (URO-D) AQ980_24805 PF00912 Transglycosylase AQ980_24805 PF00905 Penicillin binding protein transpeptidase domain AQ980_24810 PF03992 Antibiotic biosynthesis monooxygenase AQ980_24815 PF03703 Bacterial PH domain AQ980_24820 PF03703 Bacterial PH domain AQ980_24825 PF00892 EamA-like transporter family AQ980_24835 PF10014 2OG-Fe dioxygenase AQ980_24860 PF03703 Bacterial PH domain AQ980_24865 PF03703 Bacterial PH domain AQ980_24875 PF00440 Bacterial regulatory proteins, tetR family AQ980_24875 PF17934 Tetracyclin repressor-like, C-terminal domain AQ980_24880 PF12787 EcsC protein family AQ980_24885 PF05975 Bacterial ABC transporter protein EcsB AQ980_24890 PF00005 ABC transporter AQ980_24895 PF01230 HIT domain AQ980_24900 PF12732 YtxH-like protein AQ980_24905 PF01047 MarR family AQ980_24930 PF13538 UvrD-like helicase C-terminal domain AQ980_24935 PF01098 Cell cycle protein AQ980_24945 PF04542 Sigma-70 region 2 AQ980_24945 PF08281 Sigma-70, region 4 AQ980_24960 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AQ980_24960 PF01266 FAD dependent oxidoreductase AQ980_24965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ980_24965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ980_24970 PF00230 Major intrinsic protein AQ980_24975 PF04309 Glycerol-3-phosphate responsive antiterminator AQ980_24980 PF01381 Helix-turn-helix AQ980_24985 PF00190 Cupin AQ980_24995 PF14147 Sporulation protein YhaL AQ980_25010 PF17874 MalT-like TPR region AQ980_25010 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_25015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_25020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_25040 PF01336 OB-fold nucleic acid binding domain AQ980_25040 PF01966 HD domain AQ980_25045 PF13514 AAA domain AQ980_25050 PF00149 Calcineurin-like phosphoesterase AQ980_25065 PF11121 Protein of unknown function (DUF2639) AQ980_25070 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AQ980_25075 PF00107 Zinc-binding dehydrogenase AQ980_25075 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_25080 PF00392 Bacterial regulatory proteins, gntR family AQ980_25080 PF07729 FCD domain AQ980_25095 PF01906 Putative heavy-metal-binding AQ980_25120 PF00672 HAMP domain AQ980_25120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_25120 PF00512 His Kinase A (phospho-acceptor) domain AQ980_25120 PF01627 Hpt domain AQ980_25120 PF00072 Response regulator receiver domain AQ980_25120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AQ980_25125 PF03705 CheR methyltransferase, all-alpha domain AQ980_25125 PF01739 CheR methyltransferase, SAM binding domain AQ980_25130 PF13426 PAS domain AQ980_25130 PF07228 Stage II sporulation protein E (SpoIIE) AQ980_25140 PF04542 Sigma-70 region 2 AQ980_25140 PF04545 Sigma-70, region 4 AQ980_25140 PF04539 Sigma-70 region 3 AQ980_25145 PF13581 Histidine kinase-like ATPase domain AQ980_25150 PF01740 STAS domain AQ980_25170 PF11181 Heat induced stress protein YflT AQ980_25210 PF00395 S-layer homology domain AQ980_25240 PF00665 Integrase core domain AQ980_25245 PF01695 IstB-like ATP binding protein AQ980_25270 PF02733 Dak1 domain AQ980_25275 PF01810 LysE type translocator AQ980_25300 PF07690 Major Facilitator Superfamily AQ980_25305 PF13333 Integrase core domain AQ980_25305 PF00665 Integrase core domain AQ980_25305 PF13276 HTH-like domain AQ980_25320 PF01066 CDP-alcohol phosphatidyltransferase AQ980_25375 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ980_25375 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ980_25390 PF01037 Lrp/AsnC ligand binding domain AQ980_25395 PF12706 Beta-lactamase superfamily domain AQ980_25420 PF01609 Transposase DDE domain AQ980_25425 PF12146 Serine aminopeptidase, S33 AQ980_25425 PF13026 Protein of unknown function (DUF3887) AQ980_25435 PF01609 Transposase DDE domain AQ980_25440 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_25450 PF01609 Transposase DDE domain AQ980_25465 PF07298 NnrU protein AQ980_25480 PF13700 Domain of unknown function (DUF4158) AQ980_25480 PF01526 Tn3 transposase DDE domain AQ980_25490 PF06013 Proteins of 100 residues with WXG AQ980_25510 PF13333 Integrase core domain AQ980_25510 PF13276 HTH-like domain AQ980_25510 PF00665 Integrase core domain AQ980_25525 PF13302 Acetyltransferase (GNAT) domain AQ980_25540 PF07690 Major Facilitator Superfamily AQ980_25550 PF04012 PspA/IM30 family AQ980_25560 PF03606 C4-dicarboxylate anaerobic carrier AQ980_25565 PF07722 Peptidase C26 AQ980_25570 PF00158 Sigma-54 interaction domain AQ980_25570 PF13426 PAS domain AQ980_25570 PF02954 Bacterial regulatory protein, Fis family AQ980_25580 PF01925 Sulfite exporter TauE/SafE AQ980_25590 PF03796 DnaB-like helicase C terminal domain AQ980_25590 PF00772 DnaB-like helicase N terminal domain AQ980_25600 PF01494 FAD binding domain AQ980_25605 PF00772 DnaB-like helicase N terminal domain AQ980_25605 PF03796 DnaB-like helicase C terminal domain AQ980_25615 PF08463 EcoEI R protein C-terminal AQ980_25615 PF00271 Helicase conserved C-terminal domain AQ980_25615 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AQ980_25615 PF04851 Type III restriction enzyme, res subunit AQ980_25620 PF00293 NUDIX domain AQ980_25625 PF03401 Tripartite tricarboxylate transporter family receptor AQ980_25630 PF12431 Transcriptional regulator AQ980_25630 PF08279 HTH domain AQ980_25630 PF00072 Response regulator receiver domain AQ980_25635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_25635 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AQ980_25640 PF00083 Sugar (and other) transporter AQ980_25695 PF14436 Bacterial EndoU nuclease AQ980_25695 PF04740 LXG domain of WXG superfamily AQ980_25710 PF06013 Proteins of 100 residues with WXG AQ980_25720 PF13333 Integrase core domain AQ980_25720 PF00665 Integrase core domain AQ980_25720 PF13276 HTH-like domain AQ980_25740 PF00753 Metallo-beta-lactamase superfamily AQ980_25740 PF16123 Hydroxyacylglutathione hydrolase C-terminus AQ980_25755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ980_25755 PF00005 ABC transporter AQ980_25760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ980_25760 PF00005 ABC transporter AQ980_25765 PF12911 N-terminal TM domain of oligopeptide transport permease C AQ980_25765 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_25770 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_25775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_25785 PF02423 Ornithine cyclodeaminase/mu-crystallin family AQ980_25790 PF05544 Proline racemase AQ980_25795 PF11121 Protein of unknown function (DUF2639) AQ980_25805 PF00395 S-layer homology domain AQ980_25805 PF01520 N-acetylmuramoyl-L-alanine amidase AQ980_25810 PF05343 M42 glutamyl aminopeptidase AQ980_25830 PF00378 Enoyl-CoA hydratase/isomerase AQ980_25850 PF14667 Polysaccharide biosynthesis C-terminal domain AQ980_25850 PF01943 Polysaccharide biosynthesis protein AQ980_25855 PF01740 STAS domain AQ980_25855 PF00916 Sulfate permease family AQ980_25870 PF13193 AMP-binding enzyme C-terminal domain AQ980_25870 PF00501 AMP-binding enzyme AQ980_25875 PF04055 Radical SAM superfamily AQ980_25880 PF01471 Putative peptidoglycan binding domain AQ980_25880 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_25895 PF02245 Methylpurine-DNA glycosylase (MPG) AQ980_25905 PF03306 Alpha-acetolactate decarboxylase AQ980_25910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ980_25910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ980_25910 PF00205 Thiamine pyrophosphate enzyme, central domain AQ980_25925 PF06133 Control of competence regulator ComK, YlbF/YmcA AQ980_25930 PF04286 Protein of unknown function (DUF445) AQ980_25940 PF14398 YheC/D like ATP-grasp AQ980_25950 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ980_25955 PF00005 ABC transporter AQ980_25960 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_25965 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ980_25970 PF00664 ABC transporter transmembrane region AQ980_25970 PF00005 ABC transporter AQ980_25975 PF00664 ABC transporter transmembrane region AQ980_25975 PF00005 ABC transporter AQ980_25985 PF00171 Aldehyde dehydrogenase family AQ980_25995 PF01177 Asp/Glu/Hydantoin racemase AQ980_26000 PF13520 Amino acid permease AQ980_26015 PF01965 DJ-1/PfpI family AQ980_26025 PF07690 Major Facilitator Superfamily AQ980_26030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_26030 PF12793 Sugar transport-related sRNA regulator N-term AQ980_26035 PF02525 Flavodoxin-like fold AQ980_26045 PF01638 HxlR-like helix-turn-helix AQ980_26050 PF07690 Major Facilitator Superfamily AQ980_26055 PF00440 Bacterial regulatory proteins, tetR family AQ980_26055 PF17934 Tetracyclin repressor-like, C-terminal domain AQ980_26065 PF00893 Small Multidrug Resistance protein AQ980_26070 PF13411 MerR HTH family regulatory protein AQ980_26075 PF00106 short chain dehydrogenase AQ980_26080 PF00583 Acetyltransferase (GNAT) family AQ980_26080 PF00206 Lyase AQ980_26080 PF14698 Argininosuccinate lyase C-terminal AQ980_26085 PF01037 Lrp/AsnC ligand binding domain AQ980_26090 PF00892 EamA-like transporter family AQ980_26105 PF07681 DoxX AQ980_26115 PF00367 phosphotransferase system, EIIB AQ980_26115 PF02378 Phosphotransferase system, EIIC AQ980_26120 PF13580 SIS domain AQ980_26125 PF01418 Helix-turn-helix domain, rpiR family AQ980_26125 PF01380 SIS domain AQ980_26135 PF00999 Sodium/hydrogen exchanger family AQ980_26140 PF13520 Amino acid permease AQ980_26175 PF09335 SNARE associated Golgi protein AQ980_26185 PF02735 Ku70/Ku80 beta-barrel domain AQ980_26200 PF11007 Spore coat associated protein JA (CotJA) AQ980_26205 PF12652 CotJB protein AQ980_26210 PF05067 Manganese containing catalase AQ980_26215 PF05525 Branched-chain amino acid transport protein AQ980_26230 PF09529 Integral membrane protein (intg_mem_TP0381) AQ980_26240 PF00005 ABC transporter AQ980_26245 PF02687 FtsX-like permease family AQ980_26245 PF12704 MacB-like periplasmic core domain AQ980_26250 PF01476 LysM domain AQ980_26250 PF06725 3D domain AQ980_26270 PF02378 Phosphotransferase system, EIIC AQ980_26275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AQ980_26280 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AQ980_26285 PF05043 Mga helix-turn-helix domain AQ980_26285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AQ980_26285 PF08279 HTH domain AQ980_26285 PF00874 PRD domain AQ980_26295 PF07690 Major Facilitator Superfamily AQ980_26300 PF02690 Na+/Pi-cotransporter AQ980_26305 PF00107 Zinc-binding dehydrogenase AQ980_26305 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_26310 PF03816 Cell envelope-related transcriptional attenuator domain AQ980_26320 PF01925 Sulfite exporter TauE/SafE AQ980_26325 PF13686 DsrE/DsrF/DrsH-like family AQ980_26340 PF01206 Sulfurtransferase TusA AQ980_26345 PF00581 Rhodanese-like domain AQ980_26345 PF00753 Metallo-beta-lactamase superfamily AQ980_26350 PF00581 Rhodanese-like domain AQ980_26350 PF01206 Sulfurtransferase TusA AQ980_26355 PF02583 Metal-sensitive transcriptional repressor AQ980_26360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ980_26360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_26370 PF00089 Trypsin AQ980_26380 PF04293 SpoVR like protein AQ980_26385 PF00881 Nitroreductase family AQ980_26400 PF13276 HTH-like domain AQ980_26400 PF13333 Integrase core domain AQ980_26400 PF00665 Integrase core domain AQ980_26405 PF03323 Bacillus/Clostridium GerA spore germination protein AQ980_26415 PF03845 Spore germination protein AQ980_26425 PF14148 YhdB-like protein AQ980_26430 PF02600 Disulfide bond formation protein DsbB AQ980_26435 PF00085 Thioredoxin AQ980_26450 PF03734 L,D-transpeptidase catalytic domain AQ980_26450 PF17969 L,D-transpeptidase C-terminal domain AQ980_26460 PF00860 Permease family AQ980_26470 PF00005 ABC transporter AQ980_26495 PF01047 MarR family AQ980_26500 PF07690 Major Facilitator Superfamily AQ980_26505 PF02702 Osmosensitive K+ channel His kinase sensor domain AQ980_26510 PF02669 K+-transporting ATPase, c chain AQ980_26520 PF03814 Potassium-transporting ATPase A subunit AQ980_26545 PF08543 Phosphomethylpyrimidine kinase AQ980_26550 PF00899 ThiF family AQ980_26555 PF05690 Thiazole biosynthesis protein ThiG AQ980_26560 PF02597 ThiS family AQ980_26565 PF01266 FAD dependent oxidoreductase AQ980_26570 PF02581 Thiamine monophosphate synthase AQ980_26575 PF09084 NMT1/THI5 like AQ980_26580 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_26585 PF00005 ABC transporter AQ980_26590 PF03070 TENA/THI-4/PQQC family AQ980_26595 PF08239 Bacterial SH3 domain AQ980_26595 PF00246 Zinc carboxypeptidase AQ980_26615 PF00571 CBS domain AQ980_26735 PF00873 AcrB/AcrD/AcrF family AQ980_26740 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_26745 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_26750 PF12849 PBP superfamily domain AQ980_26755 PF07670 Nucleoside recognition AQ980_26755 PF02421 Ferrous iron transport protein B AQ980_26755 PF17910 FeoB cytosolic helical domain AQ980_26755 PF07664 Ferrous iron transport protein B C terminus AQ980_26755 PF04023 FeoA domain AQ980_26760 PF07670 Nucleoside recognition AQ980_26760 PF07664 Ferrous iron transport protein B C terminus AQ980_26760 PF02421 Ferrous iron transport protein B AQ980_26760 PF17910 FeoB cytosolic helical domain AQ980_26765 PF07664 Ferrous iron transport protein B C terminus AQ980_26765 PF07670 Nucleoside recognition AQ980_26765 PF17910 FeoB cytosolic helical domain AQ980_26765 PF02421 Ferrous iron transport protein B AQ980_26775 PF05504 Spore germination B3/ GerAC like, C-terminal AQ980_26780 PF03845 Spore germination protein AQ980_26785 PF03323 Bacillus/Clostridium GerA spore germination protein AQ980_26790 PF00474 Sodium:solute symporter family AQ980_26795 PF11755 Protein of unknown function (DUF3311) AQ980_26800 PF07687 Peptidase dimerisation domain AQ980_26800 PF01546 Peptidase family M20/M25/M40 AQ980_26805 PF13529 Peptidase_C39 like family AQ980_26810 PF00324 Amino acid permease AQ980_26815 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AQ980_26820 PF00115 Cytochrome C and Quinol oxidase polypeptide I AQ980_26825 PF00510 Cytochrome c oxidase subunit III AQ980_26835 PF02080 TrkA-C domain AQ980_26835 PF00999 Sodium/hydrogen exchanger family AQ980_26835 PF02254 TrkA-N domain AQ980_26845 PF13673 Acetyltransferase (GNAT) domain AQ980_26860 PF00860 Permease family AQ980_26865 PF00324 Amino acid permease AQ980_26880 PF05525 Branched-chain amino acid transport protein AQ980_26885 PF00854 POT family AQ980_26895 PF04203 Sortase domain AQ980_26905 PF01381 Helix-turn-helix AQ980_26910 PF07501 G5 domain AQ980_26910 PF03990 G5-linked-Ubiquitin-like domain AQ980_26910 PF06725 3D domain AQ980_26915 PF00672 HAMP domain AQ980_26915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_26915 PF02743 Cache domain AQ980_26920 PF02673 Bacitracin resistance protein BacA AQ980_26960 PF01580 FtsK/SpoIIIE family AQ980_26960 PF09397 Ftsk gamma domain AQ980_26960 PF17854 FtsK alpha domain AQ980_26980 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_26980 PF12123 N-acetylmuramoyl-l-alanine amidase AQ980_27050 PF00574 Clp protease AQ980_27060 PF03354 Phage Terminase AQ980_27110 PF00589 Phage integrase family AQ980_27200 PF01381 Helix-turn-helix AQ980_27210 PF00589 Phage integrase family AQ980_27215 PF03372 Endonuclease/Exonuclease/phosphatase family AQ980_27220 PF00882 Zinc dependent phospholipase C AQ980_27230 PF13333 Integrase core domain AQ980_27230 PF00665 Integrase core domain AQ980_27240 PF00107 Zinc-binding dehydrogenase AQ980_27240 PF08240 Alcohol dehydrogenase GroES-like domain AQ980_27260 PF05547 Immune inhibitor A peptidase M6 AQ980_27265 PF00923 Transaldolase/Fructose-6-phosphate aldolase AQ980_27270 PF13407 Periplasmic binding protein domain AQ980_27275 PF02653 Branched-chain amino acid transport system / permease component AQ980_27280 PF00005 ABC transporter AQ980_27285 PF05025 RbsD / FucU transport protein family AQ980_27290 PF00294 pfkB family carbohydrate kinase AQ980_27295 PF00356 Bacterial regulatory proteins, lacI family AQ980_27300 PF07690 Major Facilitator Superfamily AQ980_27305 PF01047 MarR family AQ980_27310 PF07690 Major Facilitator Superfamily AQ980_27320 PF00582 Universal stress protein family AQ980_27330 PF01740 STAS domain AQ980_27330 PF00916 Sulfate permease family AQ980_27340 PF00486 Transcriptional regulatory protein, C terminal AQ980_27340 PF00072 Response regulator receiver domain AQ980_27345 PF00672 HAMP domain AQ980_27345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_27345 PF18698 Histidine kinase sensor domain AQ980_27345 PF00512 His Kinase A (phospho-acceptor) domain AQ980_27345 PF00989 PAS fold AQ980_27350 PF01872 RibD C-terminal domain AQ980_27355 PF13280 WYL domain AQ980_27355 PF08279 HTH domain AQ980_27365 PF04542 Sigma-70 region 2 AQ980_27365 PF08281 Sigma-70, region 4 AQ980_27380 PF00324 Amino acid permease AQ980_27385 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_27390 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_27395 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ980_27400 PF00005 ABC transporter AQ980_27410 PF01235 Sodium:alanine symporter family AQ980_27415 PF01636 Phosphotransferase enzyme family AQ980_27420 PF03323 Bacillus/Clostridium GerA spore germination protein AQ980_27435 PF16657 Maltogenic Amylase, C-terminal domain AQ980_27435 PF00128 Alpha amylase, catalytic domain AQ980_27440 PF00367 phosphotransferase system, EIIB AQ980_27440 PF02378 Phosphotransferase system, EIIC AQ980_27445 PF07702 UTRA domain AQ980_27445 PF00392 Bacterial regulatory proteins, gntR family AQ980_27450 PF13520 Amino acid permease AQ980_27455 PF03707 Bacterial signalling protein N terminal repeat AQ980_27455 PF00990 Diguanylate cyclase, GGDEF domain AQ980_27455 PF00563 EAL domain AQ980_27465 PF13396 Phospholipase_D-nuclease N-terminal AQ980_27465 PF13091 PLD-like domain AQ980_27470 PF07728 AAA domain (dynein-related subfamily) AQ980_27475 PF00092 von Willebrand factor type A domain AQ980_27480 PF00293 NUDIX domain AQ980_27480 PF13344 Haloacid dehalogenase-like hydrolase AQ980_27485 PF01370 NAD dependent epimerase/dehydratase family AQ980_27490 PF00155 Aminotransferase class I and II AQ980_27495 PF08241 Methyltransferase domain AQ980_27500 PF00005 ABC transporter AQ980_27505 PF01032 FecCD transport family AQ980_27510 PF01032 FecCD transport family AQ980_27515 PF01497 Periplasmic binding protein AQ980_27520 PF00854 POT family AQ980_27525 PF08141 Small acid-soluble spore protein H family AQ980_27530 PF01022 Bacterial regulatory protein, arsR family AQ980_27535 PF00665 Integrase core domain AQ980_27540 PF01695 IstB-like ATP binding protein AQ980_27545 PF02652 L-lactate permease AQ980_27550 PF10415 Fumarase C C-terminus AQ980_27550 PF00206 Lyase AQ980_27555 PF03471 Transporter associated domain AQ980_27555 PF01595 Cyclin M transmembrane N-terminal domain AQ980_27555 PF00571 CBS domain AQ980_27560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ980_27565 PF01609 Transposase DDE domain AQ980_27570 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_27585 PF01773 Na+ dependent nucleoside transporter N-terminus AQ980_27585 PF07662 Na+ dependent nucleoside transporter C-terminus AQ980_27590 PF03816 Cell envelope-related transcriptional attenuator domain AQ980_27595 PF04294 VanW like protein AQ980_27615 PF01447 Thermolysin metallopeptidase, catalytic domain AQ980_27615 PF03413 Peptidase propeptide and YPEB domain AQ980_27615 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ980_27615 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ980_27630 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AQ980_27630 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AQ980_27630 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AQ980_27635 PF00403 Heavy-metal-associated domain AQ980_27640 PF01022 Bacterial regulatory protein, arsR family AQ980_27650 PF13520 Amino acid permease AQ980_27655 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AQ980_27655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AQ980_27665 PF07849 Protein of unknown function (DUF1641) AQ980_27670 PF00384 Molybdopterin oxidoreductase AQ980_27670 PF00037 4Fe-4S binding domain AQ980_27670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AQ980_27670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AQ980_27670 PF01568 Molydopterin dinucleotide binding domain AQ980_27675 PF02634 FdhD/NarQ family AQ980_27680 PF00583 Acetyltransferase (GNAT) family AQ980_27680 PF13508 Acetyltransferase (GNAT) domain AQ980_27695 PF00486 Transcriptional regulatory protein, C terminal AQ980_27695 PF00072 Response regulator receiver domain AQ980_27700 PF18698 Histidine kinase sensor domain AQ980_27700 PF00512 His Kinase A (phospho-acceptor) domain AQ980_27700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_27700 PF00672 HAMP domain AQ980_27700 PF00989 PAS fold AQ980_27710 PF00155 Aminotransferase class I and II AQ980_27710 PF00392 Bacterial regulatory proteins, gntR family AQ980_27715 PF00892 EamA-like transporter family AQ980_27725 PF03949 Malic enzyme, NAD binding domain AQ980_27725 PF00390 Malic enzyme, N-terminal domain AQ980_27730 PF03390 2-hydroxycarboxylate transporter family AQ980_27735 PF00072 Response regulator receiver domain AQ980_27740 PF17203 Single cache domain 3 AQ980_27740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_27740 PF00989 PAS fold AQ980_27740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AQ980_27745 PF02743 Cache domain AQ980_27745 PF00672 HAMP domain AQ980_27745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_27750 PF13529 Peptidase_C39 like family AQ980_27760 PF00512 His Kinase A (phospho-acceptor) domain AQ980_27760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_27765 PF00072 Response regulator receiver domain AQ980_27765 PF00486 Transcriptional regulatory protein, C terminal AQ980_27770 PF00149 Calcineurin-like phosphoesterase AQ980_27775 PF13416 Bacterial extracellular solute-binding protein AQ980_27780 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_27785 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_27790 PF17912 MalK OB fold domain AQ980_27790 PF00005 ABC transporter AQ980_27795 PF04309 Glycerol-3-phosphate responsive antiterminator AQ980_27820 PF03600 Citrate transporter AQ980_27825 PF12431 Transcriptional regulator AQ980_27825 PF00072 Response regulator receiver domain AQ980_27830 PF17203 Single cache domain 3 AQ980_27830 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AQ980_27830 PF00989 PAS fold AQ980_27830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_27835 PF02743 Cache domain AQ980_27835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_27835 PF00672 HAMP domain AQ980_27840 PF15975 Flotillin AQ980_27840 PF01145 SPFH domain / Band 7 family AQ980_27850 PF08453 Peptidase family M9 N-terminal AQ980_27850 PF18496 Collagenase G catalytic helper subdomain AQ980_27850 PF01752 Collagenase AQ980_27855 PF02028 BCCT, betaine/carnitine/choline family transporter AQ980_27865 PF04285 Protein of unknown function (DUF444) AQ980_27875 PF08298 PrkA AAA domain AQ980_27875 PF06798 PrkA serine protein kinase C-terminal domain AQ980_27885 PF00990 Diguanylate cyclase, GGDEF domain AQ980_27885 PF00563 EAL domain AQ980_27885 PF00498 FHA domain AQ980_27890 PF00588 SpoU rRNA Methylase family AQ980_27895 PF12671 Putative amidase domain AQ980_27900 PF08331 Domain of unknown function (DUF1730) AQ980_27910 PF13462 Thioredoxin AQ980_27915 PF00912 Transglycosylase AQ980_27915 PF00905 Penicillin binding protein transpeptidase domain AQ980_27920 PF00293 NUDIX domain AQ980_27920 PF13344 Haloacid dehalogenase-like hydrolase AQ980_27925 PF01709 Transcriptional regulator AQ980_28025 PF11023 Zinc-ribbon containing domain AQ980_28035 PF01475 Ferric uptake regulator family AQ980_28040 PF00578 AhpC/TSA family AQ980_28045 PF07885 Ion channel AQ980_28060 PF00005 ABC transporter AQ980_28065 PF00202 Aminotransferase class-III AQ980_28070 PF04898 Glutamate synthase central domain AQ980_28070 PF00310 Glutamine amidotransferases class-II AQ980_28070 PF01493 GXGXG motif AQ980_28070 PF01645 Conserved region in glutamate synthase AQ980_28075 PF06081 Aromatic acid exporter family member 1 AQ980_28080 PF00005 ABC transporter AQ980_28080 PF00664 ABC transporter transmembrane region AQ980_28085 PF04167 Protein of unknown function (DUF402) AQ980_28090 PF14182 YgaB-like protein AQ980_28095 PF04259 Small, acid-soluble spore protein, gamma-type AQ980_28105 PF14815 NUDIX domain AQ980_28105 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ980_28110 PF04307 LexA-binding, inner membrane-associated putative hydrolase AQ980_28115 PF14043 WVELL protein AQ980_28120 PF08176 Small acid-soluble spore protein K family AQ980_28135 PF02631 RecX family AQ980_28140 PF08338 Domain of unknown function (DUF1731) AQ980_28140 PF01370 NAD dependent epimerase/dehydratase family AQ980_28145 PF01979 Amidohydrolase family AQ980_28160 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AQ980_28160 PF04101 Glycosyltransferase family 28 C-terminal domain AQ980_28165 PF04055 Radical SAM superfamily AQ980_28170 PF01228 Glycine radical AQ980_28170 PF02901 Pyruvate formate lyase-like AQ980_28180 PF00535 Glycosyl transferase family 2 AQ980_28185 PF01370 NAD dependent epimerase/dehydratase family AQ980_28185 PF00551 Formyl transferase AQ980_28185 PF02911 Formyl transferase, C-terminal domain AQ980_28190 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AQ980_28190 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AQ980_28190 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AQ980_28195 PF00535 Glycosyl transferase family 2 AQ980_28210 PF00144 Beta-lactamase AQ980_28215 PF00367 phosphotransferase system, EIIB AQ980_28215 PF02378 Phosphotransferase system, EIIC AQ980_28220 PF04960 Glutaminase AQ980_28250 PF01546 Peptidase family M20/M25/M40 AQ980_28250 PF07687 Peptidase dimerisation domain AQ980_28255 PF00324 Amino acid permease AQ980_28265 PF02954 Bacterial regulatory protein, Fis family AQ980_28265 PF13426 PAS domain AQ980_28265 PF00158 Sigma-54 interaction domain AQ980_28275 PF01416 tRNA pseudouridine synthase AQ980_28280 PF05958 tRNA (Uracil-5-)-methyltransferase AQ980_28280 PF01938 TRAM domain AQ980_28285 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ980_28290 PF01522 Polysaccharide deacetylase AQ980_28295 PF05681 Fumarate hydratase (Fumerase) AQ980_28295 PF05683 Fumarase C-terminus AQ980_28305 PF04055 Radical SAM superfamily AQ980_28305 PF08756 YfkB-like domain AQ980_28310 PF14167 YfkD-like protein AQ980_28315 PF01699 Sodium/calcium exchanger protein AQ980_28320 PF16242 Pyridoxamine 5'-phosphate oxidase like AQ980_28335 PF09335 SNARE associated Golgi protein AQ980_28345 PF10502 Signal peptidase, peptidase S26 AQ980_28365 PF03631 Virulence factor BrkB AQ980_28375 PF01451 Low molecular weight phosphotyrosine protein phosphatase AQ980_28380 PF06569 Protein of unknown function (DUF1128) AQ980_28385 PF00690 Cation transporter/ATPase, N-terminus AQ980_28385 PF00689 Cation transporting ATPase, C-terminus AQ980_28390 PF05816 Toxic anion resistance protein (TelA) AQ980_28395 PF14266 Putative component of 'biosynthetic module' AQ980_28400 PF03741 Integral membrane protein TerC family AQ980_28405 PF02342 TerD domain AQ980_28410 PF02342 TerD domain AQ980_28415 PF02342 TerD domain AQ980_28420 PF00480 ROK family AQ980_28430 PF03129 Anticodon binding domain AQ980_28430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ980_28430 PF09180 Prolyl-tRNA synthetase, C-terminal AQ980_28445 PF11700 Vacuole effluxer Atg22 like AQ980_28460 PF00440 Bacterial regulatory proteins, tetR family AQ980_28460 PF08360 QacR-like protein, C-terminal region AQ980_28485 PF00704 Glycosyl hydrolases family 18 AQ980_28485 PF00041 Fibronectin type III domain AQ980_28490 PF00005 ABC transporter AQ980_28500 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_28505 PF01910 Thiamine-binding protein AQ980_28510 PF13193 AMP-binding enzyme C-terminal domain AQ980_28510 PF00550 Phosphopantetheine attachment site AQ980_28510 PF00501 AMP-binding enzyme AQ980_28510 PF00975 Thioesterase domain AQ980_28510 PF00668 Condensation domain AQ980_28515 PF00672 HAMP domain AQ980_28515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_28520 PF03605 Anaerobic c4-dicarboxylate membrane transporter AQ980_28525 PF02581 Thiamine monophosphate synthase AQ980_28530 PF02110 Hydroxyethylthiazole kinase family AQ980_28535 PF01131 DNA topoisomerase AQ980_28535 PF01751 Toprim domain AQ980_28540 PF01061 ABC-2 type transporter AQ980_28545 PF03372 Endonuclease/Exonuclease/phosphatase family AQ980_28550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AQ980_28550 PF00367 phosphotransferase system, EIIB AQ980_28550 PF02378 Phosphotransferase system, EIIC AQ980_28555 PF00128 Alpha amylase, catalytic domain AQ980_28555 PF16657 Maltogenic Amylase, C-terminal domain AQ980_28565 PF01695 IstB-like ATP binding protein AQ980_28570 PF00665 Integrase core domain AQ980_28580 PF00027 Cyclic nucleotide-binding domain AQ980_28580 PF13545 Crp-like helix-turn-helix domain AQ980_28585 PF00696 Amino acid kinase family AQ980_28590 PF13520 Amino acid permease AQ980_28595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AQ980_28595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AQ980_28605 PF01316 Arginine repressor, DNA binding domain AQ980_28605 PF02863 Arginine repressor, C-terminal domain AQ980_28610 PF12729 Four helix bundle sensory module for signal transduction AQ980_28610 PF00672 HAMP domain AQ980_28610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ980_28615 PF00005 ABC transporter AQ980_28620 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ980_28625 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_28640 PF01609 Transposase DDE domain AQ980_28650 PF07690 Major Facilitator Superfamily AQ980_28655 PF10127 RNA repair pathway DNA polymerase beta family AQ980_28675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_28675 PF13426 PAS domain AQ980_28675 PF00512 His Kinase A (phospho-acceptor) domain AQ980_28675 PF00989 PAS fold AQ980_28675 PF13188 PAS domain AQ980_28700 PF12728 Helix-turn-helix domain AQ980_28725 PF01497 Periplasmic binding protein AQ980_28730 PF01032 FecCD transport family AQ980_28735 PF01032 FecCD transport family AQ980_28740 PF00596 Class II Aldolase and Adducin N-terminal domain AQ980_28750 PF01636 Phosphotransferase enzyme family AQ980_28755 PF00578 AhpC/TSA family AQ980_28760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ980_28760 PF13192 Thioredoxin domain AQ980_28770 PF01546 Peptidase family M20/M25/M40 AQ980_28770 PF07687 Peptidase dimerisation domain AQ980_28785 PF13378 Enolase C-terminal domain-like AQ980_28785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AQ980_28800 PF07308 Protein of unknown function (DUF1456) AQ980_28805 PF01207 Dihydrouridine synthase (Dus) AQ980_28810 PF00589 Phage integrase family AQ980_28810 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_28815 PF00589 Phage integrase family AQ980_28830 PF01925 Sulfite exporter TauE/SafE AQ980_28845 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_28845 PF12123 N-acetylmuramoyl-l-alanine amidase AQ980_28915 PF00574 Clp protease AQ980_28920 PF02371 Transposase IS116/IS110/IS902 family AQ980_28920 PF01548 Transposase AQ980_28930 PF03354 Phage Terminase AQ980_28970 PF00589 Phage integrase family AQ980_29065 PF18277 AbrB C-terminal domain AQ980_29065 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ980_29075 PF01695 IstB-like ATP binding protein AQ980_29120 PF14659 Phage integrase, N-terminal SAM-like domain AQ980_29120 PF00589 Phage integrase family AQ980_29125 PF13847 Methyltransferase domain AQ980_29125 PF01938 TRAM domain AQ980_29125 PF05958 tRNA (Uracil-5-)-methyltransferase AQ980_29130 PF07662 Na+ dependent nucleoside transporter C-terminus AQ980_29130 PF07670 Nucleoside recognition AQ980_29130 PF01773 Na+ dependent nucleoside transporter N-terminus AQ980_29145 PF02073 Thermophilic metalloprotease (M29) AQ980_29155 PF00893 Small Multidrug Resistance protein AQ980_29160 PF00171 Aldehyde dehydrogenase family AQ980_29165 PF00158 Sigma-54 interaction domain AQ980_29170 PF00202 Aminotransferase class-III AQ980_29175 PF13419 Haloacid dehalogenase-like hydrolase AQ980_29180 PF00781 Diacylglycerol kinase catalytic domain AQ980_29185 PF02637 GatB domain AQ980_29185 PF02934 GatB/GatE catalytic domain AQ980_29190 PF01425 Amidase AQ980_29195 PF02686 Glu-tRNAGln amidotransferase C subunit AQ980_29200 PF05360 yiaA/B two helix domain AQ980_29205 PF01047 MarR family AQ980_29210 PF02374 Anion-transporting ATPase AQ980_29210 PF17886 HSP20-like domain found in ArsA AQ980_29225 PF03180 NLPA lipoprotein AQ980_29230 PF00528 Binding-protein-dependent transport system inner membrane component AQ980_29235 PF00005 ABC transporter AQ980_29235 PF09383 NIL domain AQ980_29240 PF00857 Isochorismatase family AQ980_29245 PF00171 Aldehyde dehydrogenase family AQ980_29250 PF01925 Sulfite exporter TauE/SafE AQ980_29255 PF07537 CamS sex pheromone cAM373 precursor AQ980_29260 PF03120 NAD-dependent DNA ligase OB-fold domain AQ980_29260 PF12826 Helix-hairpin-helix motif AQ980_29260 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AQ980_29260 PF00533 BRCA1 C Terminus (BRCT) domain AQ980_29260 PF01653 NAD-dependent DNA ligase adenylation domain AQ980_29265 PF13361 UvrD-like helicase C-terminal domain AQ980_29265 PF00580 UvrD/REP helicase N-terminal domain AQ980_29270 PF01884 PcrB family AQ980_29295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AQ980_29295 PF02844 Phosphoribosylglycinamide synthetase, N domain AQ980_29295 PF02843 Phosphoribosylglycinamide synthetase, C domain AQ980_29300 PF02142 MGS-like domain AQ980_29300 PF01808 AICARFT/IMPCHase bienzyme AQ980_29305 PF00551 Formyl transferase AQ980_29310 PF02769 AIR synthase related protein, C-terminal domain AQ980_29310 PF00586 AIR synthase related protein, N-terminal domain AQ980_29315 PF00156 Phosphoribosyl transferase domain AQ980_29320 PF02769 AIR synthase related protein, C-terminal domain AQ980_29320 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AQ980_29320 PF00586 AIR synthase related protein, N-terminal domain AQ980_29330 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AQ980_29335 PF01259 SAICAR synthetase AQ980_29340 PF00206 Lyase AQ980_29340 PF10397 Adenylosuccinate lyase C-terminus AQ980_29345 PF02222 ATP-grasp domain AQ980_29345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AQ980_29350 PF00731 AIR carboxylase AQ980_29375 PF00535 Glycosyl transferase family 2 AQ980_29385 PF01370 NAD dependent epimerase/dehydratase family AQ980_29390 PF01695 IstB-like ATP binding protein AQ980_29395 PF00665 Integrase core domain AQ980_29415 PF05045 Rhamnan synthesis protein F AQ980_29415 PF14307 Glycosyltransferase WbsX AQ980_29435 PF00486 Transcriptional regulatory protein, C terminal AQ980_29435 PF00072 Response regulator receiver domain AQ980_29440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_29440 PF00512 His Kinase A (phospho-acceptor) domain AQ980_29445 PF00005 ABC transporter AQ980_29455 PF02673 Bacitracin resistance protein BacA AQ980_29480 PF01323 DSBA-like thioredoxin domain AQ980_29505 PF16736 Single Cache-like AQ980_29505 PF00989 PAS fold AQ980_29505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ980_29505 PF00512 His Kinase A (phospho-acceptor) domain AQ980_29510 PF00486 Transcriptional regulatory protein, C terminal AQ980_29510 PF00072 Response regulator receiver domain AQ980_29515 PF00860 Permease family AQ980_29525 PF00154 recA bacterial DNA recombination protein AQ980_29545 PF12123 N-acetylmuramoyl-l-alanine amidase AQ980_29545 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_29550 PF05105 Bacteriophage holin family AQ980_29585 PF08378 Nuclease-related domain AQ980_29620 PF01348 Type II intron maturase AQ980_29620 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_29680 PF09704 CRISPR-associated protein (Cas_Cas5) AQ980_29790 PF00665 Integrase core domain AQ980_29795 PF01695 IstB-like ATP binding protein AQ980_29815 PF00712 DNA polymerase III beta subunit, N-terminal domain AQ980_29815 PF02767 DNA polymerase III beta subunit, central domain AQ980_29815 PF02768 DNA polymerase III beta subunit, C-terminal domain AQ980_29820 PF04098 Rad52/22 family double-strand break repair protein AQ980_29855 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_29865 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_29870 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_29870 PF01348 Type II intron maturase AQ980_30025 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_30025 PF01348 Type II intron maturase AQ980_30090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_30100 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_30110 PF01348 Type II intron maturase AQ980_30110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_30130 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) AQ980_30155 PF04235 Protein of unknown function (DUF418) AQ980_30165 PF14436 Bacterial EndoU nuclease AQ980_30165 PF04740 LXG domain of WXG superfamily AQ980_30175 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_30190 PF01609 Transposase DDE domain AQ980_30195 PF13700 Domain of unknown function (DUF4158) AQ980_30195 PF01526 Tn3 transposase DDE domain AQ980_30200 PF03466 LysR substrate binding domain AQ980_30200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ980_30205 PF03358 NADPH-dependent FMN reductase AQ980_30225 PF17443 Uncharacterized protein pXO2-72 AQ980_30250 PF01925 Sulfite exporter TauE/SafE AQ980_30265 PF00589 Phage integrase family AQ980_30270 PF00589 Phage integrase family AQ980_30270 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_30275 PF11798 IMS family HHH motif AQ980_30275 PF11799 impB/mucB/samB family C-terminal domain AQ980_30275 PF00817 impB/mucB/samB family AQ980_30280 PF01609 Transposase DDE domain AQ980_30290 PF00216 Bacterial DNA-binding protein AQ980_30305 PF18277 AbrB C-terminal domain AQ980_30305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ980_30310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_30325 PF00589 Phage integrase family AQ980_30325 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_30340 PF01609 Transposase DDE domain AQ980_30345 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 AQ980_30345 PF03515 Colicin-like bacteriocin tRNase domain AQ980_30375 PF02810 SEC-C motif AQ980_30375 PF01043 SecA preprotein cross-linking domain AQ980_30375 PF07517 SecA DEAD-like domain AQ980_30375 PF07516 SecA Wing and Scaffold domain AQ980_30380 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_30395 PF01022 Bacterial regulatory protein, arsR family AQ980_30405 PF13454 FAD-NAD(P)-binding AQ980_30415 PF00892 EamA-like transporter family AQ980_30425 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_30450 PF00797 N-acetyltransferase AQ980_30470 PF13700 Domain of unknown function (DUF4158) AQ980_30470 PF01526 Tn3 transposase DDE domain AQ980_30475 PF00239 Resolvase, N terminal domain AQ980_30475 PF02796 Helix-turn-helix domain of resolvase AQ980_30485 PF03945 delta endotoxin, N-terminal domain AQ980_30485 PF03944 delta endotoxin AQ980_30485 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 AQ980_30485 PF00555 delta endotoxin AQ980_30490 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_30490 PF01471 Putative peptidoglycan binding domain AQ980_30490 PF01476 LysM domain AQ980_30500 PF01609 Transposase DDE domain AQ980_30505 PF00665 Integrase core domain AQ980_30510 PF01695 IstB-like ATP binding protein AQ980_30520 PF12323 Helix-turn-helix domain AQ980_30520 PF07282 Putative transposase DNA-binding domain AQ980_30520 PF01385 Probable transposase AQ980_30530 PF00916 Sulfate permease family AQ980_30530 PF01740 STAS domain AQ980_30535 PF00582 Universal stress protein family AQ980_30540 PF00753 Metallo-beta-lactamase superfamily AQ980_30540 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AQ980_30540 PF17770 Ribonuclease J C-terminal domain AQ980_30550 PF04239 Protein of unknown function (DUF421) AQ980_30555 PF01037 Lrp/AsnC ligand binding domain AQ980_30560 PF12706 Beta-lactamase superfamily domain AQ980_30570 PF01790 Prolipoprotein diacylglyceryl transferase AQ980_30575 PF02796 Helix-turn-helix domain of resolvase AQ980_30575 PF00239 Resolvase, N terminal domain AQ980_30580 PF13700 Domain of unknown function (DUF4158) AQ980_30580 PF01526 Tn3 transposase DDE domain AQ980_30615 PF05105 Bacteriophage holin family AQ980_30625 PF07029 CryBP1 protein AQ980_30635 PF03945 delta endotoxin, N-terminal domain AQ980_30635 PF03944 delta endotoxin AQ980_30635 PF09131 Bacillus thuringiensis delta-Endotoxin, middle domain AQ980_30655 PF00589 Phage integrase family AQ980_30675 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_30680 PF01022 Bacterial regulatory protein, arsR family AQ980_30685 PF02600 Disulfide bond formation protein DsbB AQ980_30705 PF00565 Staphylococcal nuclease homologue AQ980_30715 PF13342 C-terminal repeat of topoisomerase AQ980_30715 PF01131 DNA topoisomerase AQ980_30715 PF01751 Toprim domain AQ980_30765 PF00665 Integrase core domain AQ980_30770 PF01695 IstB-like ATP binding protein AQ980_30805 PF00916 Sulfate permease family AQ980_30805 PF01740 STAS domain AQ980_30815 PF04239 Protein of unknown function (DUF421) AQ980_30820 PF01037 Lrp/AsnC ligand binding domain AQ980_30825 PF12706 Beta-lactamase superfamily domain AQ980_30835 PF01790 Prolipoprotein diacylglyceryl transferase AQ980_30840 PF00239 Resolvase, N terminal domain AQ980_30840 PF02796 Helix-turn-helix domain of resolvase AQ980_30845 PF01526 Tn3 transposase DDE domain AQ980_30845 PF13700 Domain of unknown function (DUF4158) AQ980_30860 PF00665 Integrase core domain AQ980_30865 PF01695 IstB-like ATP binding protein AQ980_30870 PF02796 Helix-turn-helix domain of resolvase AQ980_30870 PF00239 Resolvase, N terminal domain AQ980_30875 PF13700 Domain of unknown function (DUF4158) AQ980_30875 PF01526 Tn3 transposase DDE domain AQ980_30885 PF14436 Bacterial EndoU nuclease AQ980_30885 PF04740 LXG domain of WXG superfamily AQ980_30895 PF00072 Response regulator receiver domain AQ980_30895 PF00196 Bacterial regulatory proteins, luxR family AQ980_30915 PF01022 Bacterial regulatory protein, arsR family AQ980_30960 PF17209 Hfq protein AQ980_30970 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_30970 PF17874 MalT-like TPR region AQ980_30980 PF00589 Phage integrase family AQ980_30980 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_30985 PF13700 Domain of unknown function (DUF4158) AQ980_30985 PF01526 Tn3 transposase DDE domain AQ980_30990 PF01609 Transposase DDE domain AQ980_31005 PF13342 C-terminal repeat of topoisomerase AQ980_31005 PF01751 Toprim domain AQ980_31005 PF01131 DNA topoisomerase AQ980_31010 PF00589 Phage integrase family AQ980_31010 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_31030 PF17841 BID domain of Bartonella effector protein (Bep) AQ980_31030 PF02661 Fic/DOC family AQ980_31120 PF00437 Type II/IV secretion system protein AQ980_31165 PF00877 NlpC/P60 family AQ980_31175 PF04239 Protein of unknown function (DUF421) AQ980_31180 PF01037 Lrp/AsnC ligand binding domain AQ980_31185 PF12706 Beta-lactamase superfamily domain AQ980_31195 PF01790 Prolipoprotein diacylglyceryl transferase AQ980_31200 PF02796 Helix-turn-helix domain of resolvase AQ980_31200 PF00239 Resolvase, N terminal domain AQ980_31205 PF13700 Domain of unknown function (DUF4158) AQ980_31205 PF01526 Tn3 transposase DDE domain AQ980_31365 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_31365 PF17874 MalT-like TPR region AQ980_31410 PF01476 LysM domain AQ980_31410 PF08525 Opacity-associated protein A N-terminal motif AQ980_31410 PF01551 Peptidase family M23 AQ980_31465 PF01131 DNA topoisomerase AQ980_31465 PF01751 Toprim domain AQ980_31480 PF03389 MobA/MobL family AQ980_31480 PF17841 BID domain of Bartonella effector protein (Bep) AQ980_31480 PF01443 Viral (Superfamily 1) RNA helicase AQ980_31555 PF00877 NlpC/P60 family AQ980_31610 PF01695 IstB-like ATP binding protein AQ980_31615 PF00665 Integrase core domain AQ980_31630 PF01740 STAS domain AQ980_31630 PF00916 Sulfate permease family AQ980_31650 PF17633 Family of unknown function (DUF5514) AQ980_31655 PF17630 Family of unknown function (DUF5511) AQ980_31660 PF18840 Large polyvalent protein associated domain 25 AQ980_31660 PF18840 Large polyvalent protein associated domain 25 AQ980_31665 PF18840 Large polyvalent protein associated domain 25 AQ980_31680 PF13154 Protein of unknown function (DUF3991) AQ980_31685 PF13958 Toxin ToxN, type III toxin-antitoxin system AQ980_31700 PF01131 DNA topoisomerase AQ980_31700 PF01751 Toprim domain AQ980_31715 PF00239 Resolvase, N terminal domain AQ980_31715 PF02796 Helix-turn-helix domain of resolvase AQ980_31730 PF00665 Integrase core domain AQ980_31730 PF13333 Integrase core domain AQ980_31750 PF13411 MerR HTH family regulatory protein AQ980_31750 PF13152 Protein of unknown function (DUF3967) AQ980_31755 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_31760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ980_31790 PF08708 Primase C terminal 1 (PriCT-1) AQ980_31800 PF01526 Tn3 transposase DDE domain AQ980_31800 PF13700 Domain of unknown function (DUF4158) AQ980_31805 PF00589 Phage integrase family AQ980_31805 PF02899 Phage integrase, N-terminal SAM-like domain AQ980_31815 PF00239 Resolvase, N terminal domain AQ980_31815 PF02796 Helix-turn-helix domain of resolvase AQ980_31820 PF01526 Tn3 transposase DDE domain AQ980_31820 PF13700 Domain of unknown function (DUF4158) AQ980_31830 PF17362 Family of unknown function AQ980_31845 PF17631 Family of unknown function (DUF5512) AQ980_31930 PF00437 Type II/IV secretion system protein AQ980_31955 PF04956 TrbC/VIRB2 family AQ980_31975 PF12696 TraM recognition site of TraD and TraG AQ980_32020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ980_32035 PF17632 Family of unknown function (DUF5513) AQ980_32070 PF01381 Helix-turn-helix AQ980_32190 PF03838 Recombination protein U AQ980_32245 PF03592 Terminase small subunit AQ980_32245 PF10668 Phage terminase small subunit AQ980_32340 PF04688 SPP1 phage holin AQ980_32345 PF01476 LysM domain AQ980_32345 PF01510 N-acetylmuramoyl-L-alanine amidase AQ980_32345 PF01471 Putative peptidoglycan binding domain AQ980_32385 PF18801 response regulator aspartate phosphatase H, N terminal AQ980_32405 PF01076 Plasmid recombination enzyme AQ980_32410 PF01446 Replication protein