locus-tag	class	description
AQ980_00075	COG0582	viral genome integration into host DNA
AQ980_00205	COG0582	viral genome integration into host DNA
AQ980_00265	COG3378	Phage plasmid primase P4 family
AQ980_00285	COG0582	viral genome integration into host DNA
AQ980_00300	COG1266	CAAX protease self-immunity
AQ980_00315	COG0488	(ABC) transporter
AQ980_00325	COG0456	acetyltransferase
AQ980_00330	COG1214	PFAM Peptidase M22, glycoprotease
AQ980_00335	COG0802	atpase or kinase
AQ980_00435	COG2183	response to ionizing radiation
AQ980_00440	COG2337	Toxic component of a toxin-antitoxin (TA) module
AQ980_00445	COG0864	Transcriptional regulator
AQ980_00450	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AQ980_00455	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AQ980_00465	COG0705	Rhomboid family
AQ980_00470	COG4294	response to UV
AQ980_00480	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AQ980_00490	COG2814	Major facilitator Superfamily
AQ980_00495	COG0531	amino acid
AQ980_00505	COG0179	Fumarylacetoacetate (FAA) hydrolase
AQ980_00510	COG3185	4-Hydroxyphenylpyruvate dioxygenase
AQ980_00540	COG0561	phosphatase activity
AQ980_00550	COG2801	Transposase and inactivated derivatives
AQ980_00555	COG4608	Belongs to the ABC transporter superfamily
AQ980_00560	COG0444	Belongs to the ABC transporter superfamily
AQ980_00580	COG3344	reverse transcriptase
AQ980_00600	COG0747	negative chemotaxis
AQ980_00610	COG0488	(ABC) transporter
AQ980_00635	COG5298	Protein conserved in bacteria
AQ980_00655	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_00665	COG1609	Transcriptional regulator
AQ980_00675	COG0204	Acyl-transferase
AQ980_00690	COG0697	spore germination
AQ980_00710	COG1910	domain protein
AQ980_00715	COG0725	ABC transporter, periplasmic molybdate-binding protein
AQ980_00720	COG4149	molybdate abc transporter
AQ980_00735	COG0656	L-ascorbic acid biosynthetic process
AQ980_00745	COG4166	transmembrane transport
AQ980_00750	COG4166	transmembrane transport
AQ980_00765	COG2207	Transcriptional regulator
AQ980_00780	COG2814	Major facilitator Superfamily
AQ980_00790	COG2271	Major facilitator Superfamily
AQ980_00795	COG0277	FAD linked oxidase domain protein
AQ980_00805	COG0604	alcohol dehydrogenase
AQ980_00810	COG1464	Belongs to the NlpA lipoprotein family
AQ980_00815	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AQ980_00820	COG2011	ABC-type metal ion transport system permease component
AQ980_00825	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_00860	COG4856	YbbR-like protein
AQ980_00865	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AQ980_00945	COG0726	polysaccharide deacetylase
AQ980_00950	COG2194	sulfuric ester hydrolase activity
AQ980_00960	COG0489	protein tyrosine kinase activity
AQ980_00965	COG0860	N-Acetylmuramoyl-L-alanine amidase
AQ980_00990	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AQ980_01025	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AQ980_01035	COG0024	Methionine aminopeptidase
AQ980_01045	COG0201	protein transport
AQ980_01070	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AQ980_01175	COG1358	cellular component organization or biogenesis
AQ980_01190	COG2813	Specifically methylates the guanine in position
AQ980_01215	COG0250	Participates in transcription elongation, termination and antitermination
AQ980_01220	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AQ980_01225	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AQ980_01235	COG3688	RNA-binding protein containing a PIN domain
AQ980_01240	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AQ980_01255	COG1045	serine acetyltransferase
AQ980_01275	COG4956	integral membrane protein (PIN domain superfamily)
AQ980_01285	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AQ980_01290	COG0542	response to heat
AQ980_01300	COG3880	PFAM UvrB UvrC protein
AQ980_01390	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AQ980_01395	COG1396	sequence-specific DNA binding
AQ980_01400	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AQ980_01405	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AQ980_01410	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AQ980_01415	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AQ980_01420	COG0512	Glutamine amidotransferase of anthranilate synthase
AQ980_01425	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AQ980_01430	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AQ980_01445	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AQ980_01460	COG2208	phosphoserine phosphatase activity
AQ980_01475	COG1098	S1 RNA binding domain
AQ980_01495	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AQ980_01500	COG3956	TIGRFAM MazG family protein
AQ980_01505	COG2244	polysaccharide biosynthetic process
AQ980_01510	COG2002	toxin-antitoxin pair type II binding
AQ980_01515	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AQ980_01530	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AQ980_01545	COG0251	oxidation-reduction process
AQ980_01550	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AQ980_01565	COG4466	Protein conserved in bacteria
AQ980_01585	COG0084	hydrolase, TatD family'
AQ980_01595	COG2002	toxin-antitoxin pair type II binding
AQ980_01600	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AQ980_01610	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AQ980_01620	COG1774	PSP1 C-terminal conserved region
AQ980_01625	COG0470	DNA polymerase III
AQ980_01635	COG1982	Orn Lys Arg decarboxylase major
AQ980_01690	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AQ980_01695	COG0590	tRNA wobble adenosine to inosine editing
AQ980_01705	COG1335	isochorismatase
AQ980_01710	COG1428	Deoxynucleoside kinase
AQ980_01715	COG1428	Deoxynucleoside kinase
AQ980_01745	COG1686	Belongs to the peptidase S11 family
AQ980_01750	COG0516	GMP reductase activity
AQ980_01750	COG0517	IMP dehydrogenase activity
AQ980_01785	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AQ980_01790	COG0187	DNA topoisomerase II activity
AQ980_01800	COG2501	S4 domain
AQ980_01805	COG0592	DNA-directed DNA polymerase activity
AQ980_01830	COG1847	R3H domain protein
AQ980_01855	COG1192	Involved in chromosome partitioning
AQ980_01860	COG1475	DNA binding
AQ980_01870	COG0668	transmembrane transport
AQ980_01875	COG4481	Protein conserved in bacteria
AQ980_01880	COG0012	GTP binding
AQ980_01900	COG4241	membrane
AQ980_01905	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
AQ980_01915	COG0305	Participates in initiation and elongation during chromosome replication
AQ980_01945	COG0745	RESPONSE REGULATOR receiver
AQ980_01950	COG5002	protein histidine kinase activity
AQ980_01960	COG4853	Protein conserved in bacteria
AQ980_01965	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AQ980_01970	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AQ980_01985	COG5002	protein histidine kinase activity
AQ980_02025	COG3344	reverse transcriptase
AQ980_02045	COG1272	protein, Hemolysin III
AQ980_02050	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AQ980_02070	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
AQ980_02075	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AQ980_02080	COG2814	Major facilitator Superfamily
AQ980_02085	COG3275	phosphorelay sensor kinase activity
AQ980_02105	COG0628	permease
AQ980_02110	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AQ980_02110	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AQ980_02115	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AQ980_02120	COG1309	transcriptional regulator
AQ980_02125	COG0488	(ABC) transporter
AQ980_02130	COG0463	Glycosyl transferase, family 2
AQ980_02135	COG4485	Bacterial membrane protein, YfhO
AQ980_02145	COG1216	Glycosyl transferase, family 2
AQ980_02160	COG1216	Glycosyl transferase, family 2
AQ980_02165	COG1607	acyl-coa hydrolase
AQ980_02175	COG0840	transmembrane signaling receptor activity
AQ980_02190	COG0438	transferase activity, transferring glycosyl groups
AQ980_02200	COG0477	Major facilitator Superfamily
AQ980_02205	COG3279	Response regulator of the LytR AlgR family
AQ980_02210	COG1966	Carbon starvation protein
AQ980_02215	COG2879	small protein
AQ980_02220	COG3706	GGDEF domain
AQ980_02225	COG0351	phosphomethylpyrimidine kinase
AQ980_02230	COG2203	Gaf domain
AQ980_02230	COG4585	Histidine kinase
AQ980_02235	COG2197	response regulator
AQ980_02245	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AQ980_02250	COG1011	Hydrolase
AQ980_02270	COG0460	homoserine dehydrogenase
AQ980_02280	COG1609	Transcriptional regulator
AQ980_02285	COG2755	lipolytic protein G-D-S-L family
AQ980_02290	COG1131	(ABC) transporter
AQ980_02295	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
AQ980_02305	COG2814	Major facilitator Superfamily
AQ980_02310	COG0561	phosphatase activity
AQ980_02315	COG2233	PERMEase
AQ980_02320	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AQ980_02330	COG2363	Small membrane protein
AQ980_02340	COG3773	Cell wall hydrolase
AQ980_02355	COG0280	phosphate acetyltransferase
AQ980_02375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_02380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_02385	COG1120	ATPase activity
AQ980_02390	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AQ980_02395	COG1078	dGTPase activity
AQ980_02405	COG1994	Peptidase M50
AQ980_02415	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AQ980_02420	COG0584	glycerophosphoryl diester phosphodiesterase
AQ980_02425	COG0789	Transcriptional regulator
AQ980_02430	COG2814	Major facilitator Superfamily
AQ980_02435	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
AQ980_02460	COG1619	proteins homologs of microcin C7 resistance protein MccF
AQ980_02465	COG4506	Protein conserved in bacteria
AQ980_02475	COG1595	DNA-templated transcription, initiation
AQ980_02500	COG2801	Transposase and inactivated derivatives
AQ980_02505	COG2234	aminopeptidase activity
AQ980_02515	COG0024	Methionine aminopeptidase
AQ980_02520	COG1131	(ABC) transporter
AQ980_02525	COG0842	Transport permease protein
AQ980_02530	COG4585	Histidine kinase
AQ980_02535	COG2197	response regulator
AQ980_02540	COG3227	Zinc metalloprotease (Elastase)
AQ980_02555	COG3300	MHYT domain
AQ980_02555	COG5001	Diguanylate cyclase
AQ980_02575	COG3344	reverse transcriptase
AQ980_02590	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AQ980_02595	COG0247	lactate metabolic process
AQ980_02595	COG2181	nitrate reductase activity
AQ980_02600	COG0183	Belongs to the thiolase family
AQ980_02605	COG1250	3-hydroxyacyl-CoA dehydrogenase
AQ980_02610	COG1960	acyl-CoA dehydrogenase activity
AQ980_02615	COG1960	acyl-CoA dehydrogenase activity
AQ980_02625	COG3343	RNA polymerase activity
AQ980_02635	COG4821	SIS domain
AQ980_02655	COG1494	fructose-1,6-bisphosphatase
AQ980_02660	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AQ980_02695	COG0009	L-threonylcarbamoyladenylate synthase
AQ980_02715	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AQ980_02720	COG2259	Doxx family
AQ980_02735	COG0698	ribose 5-phosphate isomerase
AQ980_02770	COG0356	it plays a direct role in the translocation of protons across the membrane
AQ980_02835	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AQ980_02855	COG0839	Belongs to the complex I subunit 6 family
AQ980_02865	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AQ980_02870	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AQ980_02875	COG1007	ATP synthesis coupled electron transport
AQ980_02880	COG4836	Membrane
AQ980_02895	COG2385	sporulation resulting in formation of a cellular spore
AQ980_02900	COG3279	Response regulator of the LytR AlgR family
AQ980_02915	COG0739	heme binding
AQ980_02925	COG1609	Transcriptional regulator
AQ980_02940	COG0489	protein tyrosine kinase activity
AQ980_02945	COG3944	biosynthesis protein
AQ980_02950	COG0489	protein tyrosine kinase activity
AQ980_02955	COG4464	protein tyrosine phosphatase activity
AQ980_02960	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AQ980_02975	COG1216	Glycosyl transferase, family 2
AQ980_02985	COG0438	transferase activity, transferring glycosyl groups
AQ980_02990	COG0463	Glycosyl transferase, family 2
AQ980_02995	COG1215	transferase activity, transferring glycosyl groups
AQ980_03000	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AQ980_03005	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AQ980_03020	COG0745	RESPONSE REGULATOR receiver
AQ980_03025	COG5002	protein histidine kinase activity
AQ980_03050	COG1136	(ABC) transporter
AQ980_03055	COG0577	efflux transmembrane transporter activity
AQ980_03065	COG1191	sigma factor activity
AQ980_03095	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AQ980_03100	COG4715	Zinc finger, swim domain protein
AQ980_03125	COG1388	LysM domain
AQ980_03125	COG3584	3D domain protein
AQ980_03130	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AQ980_03140	COG1215	transferase activity, transferring glycosyl groups
AQ980_03150	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AQ980_03155	COG1388	LysM domain
AQ980_03155	COG0791	NLP P60 protein
AQ980_03165	COG1368	sulfuric ester hydrolase activity
AQ980_03175	COG2389	metal-binding protein
AQ980_03190	COG1620	l-lactate permease
AQ980_03200	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AQ980_03205	COG1294	oxidase, subunit
AQ980_03210	COG1271	oxidase subunit
AQ980_03220	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AQ980_03225	COG0583	DNA-binding transcription factor activity
AQ980_03230	COG1511	domain protein
AQ980_03245	COG1301	dicarboxylic acid transport
AQ980_03250	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AQ980_03260	COG1447	Phosphotransferase system cellobiose-specific component IIA
AQ980_03270	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AQ980_03275	COG1447	Phosphotransferase system cellobiose-specific component IIA
AQ980_03280	COG1486	melibiose metabolic process
AQ980_03300	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AQ980_03300	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AQ980_03310	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AQ980_03315	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AQ980_03320	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AQ980_03325	COG1316	TRANSCRIPTIONal
AQ980_03330	COG1739	Uncharacterized protein family UPF0029
AQ980_03335	COG1307	EDD domain protein, DegV family
AQ980_03340	COG1733	regulation of RNA biosynthetic process
AQ980_03345	COG0791	NLP P60 protein
AQ980_03345	COG1388	LysM domain
AQ980_03350	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
AQ980_03355	COG1040	competence protein
AQ980_03360	COG1278	Cold shock
AQ980_03365	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AQ980_03395	COG1131	(ABC) transporter
AQ980_03410	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AQ980_03425	COG2884	Cell division ATP-binding protein ftsE
AQ980_03430	COG2177	Part of the ABC transporter FtsEX involved in
AQ980_03435	COG0793	Belongs to the peptidase S41A family
AQ980_03435	COG3409	Peptidoglycan-binding domain 1 protein
AQ980_03440	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AQ980_03445	COG1132	(ABC) transporter
AQ980_03460	COG0655	NAD(P)H dehydrogenase (quinone) activity
AQ980_03470	COG0583	DNA-binding transcription factor activity
AQ980_03490	COG0789	Transcriptional regulator
AQ980_03505	COG0556	nucleotide-excision repair
AQ980_03510	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AQ980_03520	COG1950	PFAM Membrane protein of
AQ980_03540	COG0110	maltose O-acetyltransferase activity
AQ980_03545	COG0457	Tetratricopeptide repeat
AQ980_03550	COG0492	ferredoxin-NADP+ reductase activity
AQ980_03560	COG1051	belongs to the nudix hydrolase family
AQ980_03570	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AQ980_03580	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AQ980_03590	COG2323	membrane
AQ980_03605	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AQ980_03630	COG0582	viral genome integration into host DNA
AQ980_03655	COG3646	Phage regulatory protein
AQ980_03735	COG3331	DNA recombination
AQ980_03870	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_03875	COG4824	toxin secretion phage lysis holin
AQ980_03880	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_03885	COG3409	Peptidoglycan-binding domain 1 protein
AQ980_03885	COG5632	N-Acetylmuramoyl-L-alanine amidase
AQ980_03885	COG1388	LysM domain
AQ980_03890	COG0457	Tetratricopeptide repeat
AQ980_03920	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AQ980_03935	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AQ980_03970	COG1346	cytolysis
AQ980_03975	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AQ980_03980	COG1647	Serine aminopeptidase, S33
AQ980_03985	COG0557	exoribonuclease II activity
AQ980_04010	COG3344	reverse transcriptase
AQ980_04025	COG0745	RESPONSE REGULATOR receiver
AQ980_04070	COG3223	Belongs to the PsiE family
AQ980_04075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_04080	COG0488	(ABC) transporter
AQ980_04135	COG1252	NADH dehydrogenase
AQ980_04145	COG1733	regulation of RNA biosynthetic process
AQ980_04150	COG2814	Major facilitator Superfamily
AQ980_04155	COG0656	L-ascorbic acid biosynthetic process
AQ980_04170	COG2910	NAD(P)H-binding
AQ980_04175	COG1115	amino acid carrier protein
AQ980_04180	COG1115	amino acid carrier protein
AQ980_04185	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AQ980_04200	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AQ980_04205	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AQ980_04215	COG1528	Iron-storage protein
AQ980_04225	COG1611	Belongs to the LOG family
AQ980_04240	COG0783	Belongs to the Dps family
AQ980_04245	COG1115	amino acid carrier protein
AQ980_04255	COG0490	domain, Protein
AQ980_04260	COG0475	glutathione-regulated potassium exporter activity
AQ980_04265	COG0586	Pfam SNARE associated Golgi protein
AQ980_04285	COG3227	Zinc metalloprotease (Elastase)
AQ980_04290	COG2151	metal-sulfur cluster biosynthetic enzyme
AQ980_04295	COG0840	transmembrane signaling receptor activity
AQ980_04325	COG5002	protein histidine kinase activity
AQ980_04330	COG0745	RESPONSE REGULATOR receiver
AQ980_04335	COG1376	ErfK ybiS ycfS ynhG family protein
AQ980_04345	COG0586	Pfam SNARE associated Golgi protein
AQ980_04380	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_04400	COG0531	amino acid
AQ980_04405	COG2814	Major facilitator Superfamily
AQ980_04420	COG0840	transmembrane signaling receptor activity
AQ980_04425	COG0011	TIGRFAM Protein of
AQ980_04440	COG1686	Belongs to the peptidase S11 family
AQ980_04450	COG1024	Enoyl-CoA hydratase
AQ980_04450	COG1250	3-hydroxyacyl-CoA dehydrogenase
AQ980_04455	COG0183	Belongs to the thiolase family
AQ980_04460	COG1960	acyl-CoA dehydrogenase activity
AQ980_04465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_04470	COG1309	transcriptional regulator
AQ980_04485	COG0039	L-malate dehydrogenase activity
AQ980_04505	COG1393	Belongs to the ArsC family
AQ980_04515	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AQ980_04520	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AQ980_04535	COG2011	ABC-type metal ion transport system permease component
AQ980_04540	COG1464	Belongs to the NlpA lipoprotein family
AQ980_04545	COG1464	Belongs to the NlpA lipoprotein family
AQ980_04550	COG0396	ATPase activity
AQ980_04555	COG0719	Fe-S assembly protein
AQ980_04560	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AQ980_04565	COG0822	iron-sulfur transferase activity
AQ980_04570	COG0719	Fe-S assembly protein
AQ980_04575	COG0737	Belongs to the 5'-nucleotidase family
AQ980_04580	COG3377	Domain of unknown function (DUF1805)
AQ980_04590	COG0739	heme binding
AQ980_04615	COG4377	Putative membrane peptidase family (DUF2324)
AQ980_04620	COG0789	Transcriptional regulator
AQ980_04630	COG4470	Protein conserved in bacteria
AQ980_04655	COG1494	fructose-1,6-bisphosphatase
AQ980_04660	COG2445	Protein of unknown function DUF86
AQ980_04670	COG0647	UMP catabolic process
AQ980_04675	COG2249	NAD(P)H dehydrogenase (quinone) activity
AQ980_04685	COG1358	cellular component organization or biogenesis
AQ980_04705	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AQ980_04710	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AQ980_04720	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AQ980_04725	COG4837	Protein of unknown function (DUF1462)
AQ980_04770	COG2824	Alkylphosphonate utilization operon protein PhnA
AQ980_04775	COG0390	transport system, permease component
AQ980_04780	COG2274	protein secretion by the type I secretion system
AQ980_04790	COG1252	NADH dehydrogenase
AQ980_04805	COG0316	Belongs to the HesB IscA family
AQ980_04810	COG2801	Transposase and inactivated derivatives
AQ980_04815	COG2963	transposase activity
AQ980_04850	COG1396	sequence-specific DNA binding
AQ980_04940	COG0582	viral genome integration into host DNA
AQ980_04990	COG1802	Transcriptional regulator
AQ980_04990	COG4626	Terminase
AQ980_05000	COG0740	serine-type endopeptidase activity
AQ980_05060	COG4824	toxin secretion phage lysis holin
AQ980_05065	COG1388	LysM domain
AQ980_05065	COG5632	N-Acetylmuramoyl-L-alanine amidase
AQ980_05065	COG3409	Peptidoglycan-binding domain 1 protein
AQ980_05125	COG1683	Conserved Protein
AQ980_05140	COG3708	Transcriptional regulator
AQ980_05155	COG1252	NADH dehydrogenase
AQ980_05170	COG3584	3D domain protein
AQ980_05185	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AQ980_05190	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AQ980_05195	COG1268	BioY protein
AQ980_05205	COG2050	protein possibly involved in aromatic compounds catabolism
AQ980_05210	COG2801	Transposase and inactivated derivatives
AQ980_05220	COG0423	glycine-tRNA ligase activity
AQ980_05235	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AQ980_05240	COG5018	Exonuclease
AQ980_05260	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AQ980_05270	COG2267	carboxylic ester hydrolase activity
AQ980_05275	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AQ980_05280	COG1522	sequence-specific DNA binding
AQ980_05285	COG0436	Aminotransferase
AQ980_05290	COG1098	S1 RNA binding domain
AQ980_05295	COG2155	Conserved Protein
AQ980_05315	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AQ980_05320	COG1285	pathogenesis
AQ980_05355	COG0544	peptidyl-prolyl cis-trans isomerase activity
AQ980_05450	COG0039	L-malate dehydrogenase activity
AQ980_05475	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AQ980_05485	COG0058	SHG alpha-glucan phosphorylase activity
AQ980_05515	COG1278	Cold shock
AQ980_05520	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AQ980_05525	COG1575	Belongs to the MenA family. Type 1 subfamily
AQ980_05530	COG1169	isochorismate synthase
AQ980_05540	COG0596	Alpha beta hydrolase
AQ980_05545	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AQ980_05565	COG4948	Mandelate Racemase Muconate Lactonizing
AQ980_05585	COG3964	amidohydrolase
AQ980_05610	COG2801	Transposase and inactivated derivatives
AQ980_05640	COG0577	efflux transmembrane transporter activity
AQ980_05645	COG1136	(ABC) transporter
AQ980_05650	COG0577	efflux transmembrane transporter activity
AQ980_05655	COG0577	efflux transmembrane transporter activity
AQ980_05660	COG2205	protein histidine kinase activity
AQ980_05665	COG0745	RESPONSE REGULATOR receiver
AQ980_05670	COG0640	Transcriptional regulator
AQ980_05675	COG5658	integral membrane protein
AQ980_05685	COG3708	Transcriptional regulator
AQ980_05685	COG2207	Transcriptional regulator
AQ980_05690	COG1136	(ABC) transporter
AQ980_05695	COG0577	efflux transmembrane transporter activity
AQ980_05705	COG0586	Pfam SNARE associated Golgi protein
AQ980_05730	COG1597	lipid kinase activity
AQ980_05760	COG0745	RESPONSE REGULATOR receiver
AQ980_05765	COG5002	protein histidine kinase activity
AQ980_05795	COG1842	Phage shock protein A
AQ980_05820	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_05835	COG1294	oxidase, subunit
AQ980_05840	COG1271	oxidase subunit
AQ980_05845	COG0288	reversible hydration of carbon dioxide
AQ980_05885	COG0494	nUDIX hydrolase
AQ980_05905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AQ980_05910	COG1116	anion transmembrane transporter activity
AQ980_05915	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AQ980_05935	COG1368	sulfuric ester hydrolase activity
AQ980_05940	COG2267	carboxylic ester hydrolase activity
AQ980_05950	COG3852	Histidine kinase
AQ980_05955	COG5002	protein histidine kinase activity
AQ980_05965	COG1349	DNA-binding transcription factor activity
AQ980_05970	COG0546	phosphoglycolate phosphatase activity
AQ980_06015	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_06040	COG0438	transferase activity, transferring glycosyl groups
AQ980_06045	COG0671	phosphoesterase, PA-phosphatase related
AQ980_06050	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AQ980_06055	COG2267	carboxylic ester hydrolase activity
AQ980_06075	COG1794	racemase activity, acting on amino acids and derivatives
AQ980_06080	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AQ980_06085	COG1242	4 iron, 4 sulfur cluster binding
AQ980_06105	COG1136	(ABC) transporter
AQ980_06115	COG0582	viral genome integration into host DNA
AQ980_06120	COG0490	domain, Protein
AQ980_06125	COG0475	glutathione-regulated potassium exporter activity
AQ980_06130	COG2814	Major facilitator Superfamily
AQ980_06175	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AQ980_06185	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AQ980_06205	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AQ980_06210	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AQ980_06220	COG0303	'Molybdopterin
AQ980_06225	COG1763	Mo-molybdopterin cofactor biosynthetic process
AQ980_06230	COG0314	molybdopterin synthase activity
AQ980_06255	COG1329	Transcriptional regulator
AQ980_06280	COG3832	glyoxalase III activity
AQ980_06290	COG2814	Major facilitator Superfamily
AQ980_06295	COG2081	HI0933 family
AQ980_06300	COG2244	polysaccharide biosynthetic process
AQ980_06305	COG1187	pseudouridine synthase activity
AQ980_06310	COG1349	DNA-binding transcription factor activity
AQ980_06315	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AQ980_06325	COG1523	belongs to the glycosyl hydrolase 13 family
AQ980_06330	COG0510	thiamine kinase activity
AQ980_06345	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_06355	COG1363	Peptidase, m42
AQ980_06360	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
AQ980_06365	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AQ980_06375	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AQ980_06390	COG1674	ftsk spoiiie
AQ980_06405	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_06420	COG2309	aminopeptidase activity
AQ980_06430	COG3118	belongs to the thioredoxin family
AQ980_06435	COG4851	CamS sex pheromone cAM373 precursor
AQ980_06440	COG1605	Chorismate mutase
AQ980_06440	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AQ980_06450	COG1609	Transcriptional regulator
AQ980_06485	COG3279	Response regulator of the LytR AlgR family
AQ980_06505	COG0745	RESPONSE REGULATOR receiver
AQ980_06505	COG2972	Histidine kinase
AQ980_06510	COG0666	response to abiotic stimulus
AQ980_06520	COG0745	RESPONSE REGULATOR receiver
AQ980_06535	COG0123	including yeast histone deacetylase and acetoin utilization protein
AQ980_06540	COG0517	IMP dehydrogenase activity
AQ980_06545	COG0454	-acetyltransferase
AQ980_06550	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AQ980_06555	COG0110	maltose O-acetyltransferase activity
AQ980_06565	COG1595	DNA-templated transcription, initiation
AQ980_06605	COG0626	cystathionine gamma-synthase activity
AQ980_06610	COG1956	GAF domain-containing protein
AQ980_06615	COG1309	transcriptional regulator
AQ980_06620	COG0697	spore germination
AQ980_06625	COG0583	DNA-binding transcription factor activity
AQ980_06635	COG1104	cysteine desulfurase activity
AQ980_06650	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AQ980_06660	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AQ980_06675	COG3874	Sporulation protein YtfJ
AQ980_06680	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AQ980_06685	COG0827	DNA restriction-modification system
AQ980_06710	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_06755	COG0589	response to stress
AQ980_06760	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_06775	COG0662	Cupin 2, conserved barrel domain protein
AQ980_06810	COG0006	proline dipeptidase activity
AQ980_06825	COG4109	DRTGG domain
AQ980_06840	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AQ980_06855	COG0587	DNA-directed DNA polymerase activity
AQ980_06860	COG0281	malic enzyme
AQ980_06865	COG1725	Transcriptional regulator
AQ980_06890	COG3030	protein affecting phage T7 exclusion by the F plasmid
AQ980_06895	COG0628	permease
AQ980_06910	COG0372	Belongs to the citrate synthase family
AQ980_06915	COG0538	isocitrate dehydrogenase activity
AQ980_06935	COG0745	RESPONSE REGULATOR receiver
AQ980_06940	COG5002	protein histidine kinase activity
AQ980_06945	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AQ980_06945	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AQ980_06955	COG1971	Probably functions as a manganese efflux pump
AQ980_06965	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AQ980_06970	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
AQ980_06980	COG3611	Membrane attachment protein
AQ980_06985	COG1484	DNA-dependent DNA replication
AQ980_07000	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AQ980_07025	COG1363	Peptidase, m42
AQ980_07030	COG1309	transcriptional regulator
AQ980_07035	COG1566	PFAM secretion protein HlyD family protein
AQ980_07040	COG2814	Major facilitator Superfamily
AQ980_07060	COG1418	mRNA catabolic process
AQ980_07070	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AQ980_07115	COG1286	toxin biosynthetic process
AQ980_07120	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AQ980_07120	COG1796	DNA polymerase
AQ980_07135	COG1187	pseudouridine synthase activity
AQ980_07140	COG1114	Component of the transport system for branched-chain amino acids
AQ980_07145	COG5386	Cell surface protein
AQ980_07155	COG5386	Cell surface protein
AQ980_07170	COG1120	ATPase activity
AQ980_07175	COG4509	Sortase family
AQ980_07185	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AQ980_07190	COG4895	conserved protein (DUF2196)
AQ980_07200	COG0745	RESPONSE REGULATOR receiver
AQ980_07205	COG2205	protein histidine kinase activity
AQ980_07210	COG1131	(ABC) transporter
AQ980_07240	COG2318	DinB family
AQ980_07265	COG0318	PFAM AMP-dependent synthetase and ligase
AQ980_07270	COG1309	transcriptional regulator
AQ980_07275	COG1024	Enoyl-CoA hydratase
AQ980_07280	COG2086	electron transfer activity
AQ980_07285	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AQ980_07290	COG3118	belongs to the thioredoxin family
AQ980_07300	COG1719	4-vinyl reductase, 4VR
AQ980_07305	COG2009	succinate dehydrogenase
AQ980_07310	COG1053	succinate dehydrogenase
AQ980_07315	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AQ980_07320	COG0824	Thioesterase
AQ980_07325	COG1876	peptidase activity
AQ980_07330	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AQ980_07335	COG1360	Flagellar Motor Protein
AQ980_07340	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
AQ980_07345	COG4152	abc transporter atp-binding protein
AQ980_07350	COG1668	transmembrane transport
AQ980_07355	COG1959	2 iron, 2 sulfur cluster binding
AQ980_07365	COG0697	spore germination
AQ980_07370	COG1396	sequence-specific DNA binding
AQ980_07375	COG1983	PspC domain protein
AQ980_07380	COG0402	S-adenosylhomocysteine deaminase activity
AQ980_07385	COG2233	PERMEase
AQ980_07390	COG2197	response regulator
AQ980_07410	COG5401	PFAM Sporulation and spore germination
AQ980_07420	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AQ980_07425	COG0622	Phosphoesterase
AQ980_07470	COG0470	DNA polymerase III
AQ980_07470	COG1067	ATP-dependent peptidase activity
AQ980_07485	COG1764	response to oxidative stress
AQ980_07490	COG1846	Transcriptional regulator
AQ980_07500	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AQ980_07510	COG1587	Uroporphyrinogen-III synthase
AQ980_07515	COG0113	porphobilinogen synthase activity
AQ980_07525	COG1388	LysM domain
AQ980_07540	COG0285	dihydrofolate synthase activity
AQ980_07560	COG1077	Cell shape determining protein MreB Mrl
AQ980_07565	COG1792	Involved in formation and maintenance of cell shape
AQ980_07580	COG2894	cell division
AQ980_07585	COG0739	heme binding
AQ980_07590	COG1994	Peptidase M50
AQ980_07595	COG1530	ribonuclease E activity
AQ980_07605	COG2868	ribosomal protein
AQ980_07615	COG3290	protein histidine kinase activity
AQ980_07625	COG0745	RESPONSE REGULATOR receiver
AQ980_07630	COG5002	protein histidine kinase activity
AQ980_07635	COG1136	(ABC) transporter
AQ980_07640	COG0577	efflux transmembrane transporter activity
AQ980_07645	COG0577	efflux transmembrane transporter activity
AQ980_07650	COG0077	Prephenate dehydratase
AQ980_07655	COG2258	MOSC domain
AQ980_07660	COG1827	regulation of RNA biosynthetic process
AQ980_07665	COG1104	cysteine desulfurase activity
AQ980_07670	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AQ980_07675	COG0157	Belongs to the NadC ModD family
AQ980_07705	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
AQ980_07735	COG1862	Preprotein translocase
AQ980_07745	COG2323	membrane
AQ980_07750	COG2244	polysaccharide biosynthetic process
AQ980_07760	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AQ980_07760	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AQ980_07765	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AQ980_07770	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AQ980_07770	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AQ980_07780	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AQ980_07805	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AQ980_07820	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AQ980_07825	COG1959	2 iron, 2 sulfur cluster binding
AQ980_07830	COG1104	cysteine desulfurase activity
AQ980_07845	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AQ980_07865	COG0628	permease
AQ980_07895	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AQ980_07930	COG0768	penicillin binding
AQ980_07955	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AQ980_07960	COG0626	cystathionine gamma-synthase activity
AQ980_07965	COG1454	alcohol dehydrogenase
AQ980_07965	COG1012	belongs to the aldehyde dehydrogenase family
AQ980_07975	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AQ980_08015	COG2259	Doxx family
AQ980_08020	COG2514	catechol 2,3-dioxygenase activity
AQ980_08030	COG3186	Phenylalanine-4-hydroxylase
AQ980_08080	COG2267	carboxylic ester hydrolase activity
AQ980_08090	COG1785	Belongs to the alkaline phosphatase family
AQ980_08100	COG2357	RelA SpoT domain protein
AQ980_08105	COG0778	Nitroreductase
AQ980_08115	COG1595	DNA-templated transcription, initiation
AQ980_08125	COG1191	sigma factor activity
AQ980_08140	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
AQ980_08145	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AQ980_08155	COG1534	Rna-binding protein
AQ980_08165	COG1713	HD superfamily hydrolase involved in NAD metabolism
AQ980_08170	COG0799	negative regulation of ribosome biogenesis
AQ980_08175	COG2226	methyltransferase
AQ980_08180	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AQ980_08185	COG1555	photosystem II stabilization
AQ980_08185	COG1596	polysaccharide export
AQ980_08190	COG2131	deaminase
AQ980_08195	COG0658	competence protein
AQ980_08195	COG2333	competence protein COMEC
AQ980_08205	COG1466	dna polymerase III delta subunit
AQ980_08230	COG1733	regulation of RNA biosynthetic process
AQ980_08235	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AQ980_08265	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AQ980_08270	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AQ980_08280	COG1610	YqeY-like protein
AQ980_08295	COG1702	phosphate starvation-inducible protein PhoH
AQ980_08300	COG1480	7TM receptor with intracellular HD hydrolase
AQ980_08310	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AQ980_08315	COG0295	cytidine deaminase activity
AQ980_08320	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AQ980_08335	COG0517	IMP dehydrogenase activity
AQ980_08350	COG0358	DNA primase activity
AQ980_08355	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AQ980_08365	COG2384	SAM-dependent methyltransferase
AQ980_08370	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AQ980_08400	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_08405	COG1121	(ABC) transporter
AQ980_08410	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AQ980_08415	COG0735	belongs to the Fur family
AQ980_08430	COG5521	maltodextrose utilization protein MalA
AQ980_08440	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AQ980_08445	COG0477	Major facilitator Superfamily
AQ980_08455	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AQ980_08460	COG0573	inorganic phosphate transmembrane transporter activity
AQ980_08465	COG0573	inorganic phosphate transmembrane transporter activity
AQ980_08475	COG0704	Plays a role in the regulation of phosphate uptake
AQ980_08480	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AQ980_08490	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AQ980_08495	COG4483	Protein conserved in bacteria
AQ980_08500	COG1940	carbohydrate kinase activity
AQ980_08510	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_08530	COG0626	cystathionine gamma-synthase activity
AQ980_08535	COG0626	cystathionine gamma-synthase activity
AQ980_08545	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AQ980_08545	COG0646	methionine synthase
AQ980_08550	COG0646	methionine synthase
AQ980_08550	COG1410	methionine synthase
AQ980_08605	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AQ980_08610	COG1459	type II secretion system
AQ980_08675	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AQ980_08705	COG1725	Transcriptional regulator
AQ980_08710	COG1131	(ABC) transporter
AQ980_08745	COG2076	Multidrug Resistance protein
AQ980_08750	COG2076	Multidrug Resistance protein
AQ980_08760	COG1609	Transcriptional regulator
AQ980_08770	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AQ980_08805	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AQ980_08815	COG3872	metal-dependent enzyme
AQ980_08830	COG0006	proline dipeptidase activity
AQ980_08855	COG3854	ATPases associated with a variety of cellular activities
AQ980_08900	COG0511	ligase activity, forming carbon-carbon bonds
AQ980_08905	COG0439	Biotin carboxylase
AQ980_08910	COG1302	Protein conserved in bacteria
AQ980_08935	COG0142	geranyltranstransferase activity
AQ980_08945	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AQ980_08955	COG0497	DNA recombination
AQ980_08960	COG0750	zinc metalloprotease
AQ980_08980	COG3093	addiction module antidote protein HigA
AQ980_08985	COG0584	glycerophosphoryl diester phosphodiesterase
AQ980_08995	COG3290	protein histidine kinase activity
AQ980_08995	COG3829	transcription factor binding
AQ980_09005	COG0280	phosphate acetyltransferase
AQ980_09010	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AQ980_09020	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AQ980_09025	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AQ980_09030	COG0022	dehydrogenase e1 component
AQ980_09035	COG0508	dehydrogenase complex catalyzes the overall conversion of
AQ980_09045	COG0772	Belongs to the SEDS family
AQ980_09050	COG2323	membrane
AQ980_09070	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AQ980_09075	COG0765	amino acid transport
AQ980_09080	COG1126	abc transporter atp-binding protein
AQ980_09085	COG4129	membrane
AQ980_09090	COG1376	ErfK ybiS ycfS ynhG family protein
AQ980_09105	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_09110	COG2195	Cleaves the N-terminal amino acid of tripeptides
AQ980_09120	COG1285	pathogenesis
AQ980_09155	COG1760	l-serine dehydratase
AQ980_09160	COG1760	l-serine dehydratase
AQ980_09165	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AQ980_09170	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_09175	COG0300	oxidoreductase activity
AQ980_09220	COG1522	sequence-specific DNA binding
AQ980_09230	COG0737	Belongs to the 5'-nucleotidase family
AQ980_09245	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AQ980_09260	COG1073	alpha beta
AQ980_09260	COG2226	methyltransferase
AQ980_09290	COG0307	riboflavin synthase, alpha
AQ980_09295	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AQ980_09295	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AQ980_09310	COG1073	alpha beta
AQ980_09315	COG0456	acetyltransferase
AQ980_09320	COG1609	Transcriptional regulator
AQ980_09325	COG2056	Na+-H+ antiporter family
AQ980_09330	COG0596	Alpha beta hydrolase
AQ980_09340	COG0737	Belongs to the 5'-nucleotidase family
AQ980_09340	COG4085	toxin activity
AQ980_09340	COG1525	nuclease
AQ980_09350	COG0456	acetyltransferase
AQ980_09350	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AQ980_09355	COG0656	L-ascorbic acid biosynthetic process
AQ980_09360	COG0667	Aldo Keto reductase
AQ980_09380	COG1300	Membrane
AQ980_09385	COG0735	belongs to the Fur family
AQ980_09395	COG4974	Belongs to the 'phage' integrase family
AQ980_09420	COG0598	Magnesium transport protein CorA
AQ980_09435	COG1846	Transcriptional regulator
AQ980_09450	COG1131	(ABC) transporter
AQ980_09455	COG1725	Transcriptional regulator
AQ980_09460	COG1686	Belongs to the peptidase S11 family
AQ980_09505	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AQ980_09520	COG0697	spore germination
AQ980_09525	COG0561	phosphatase activity
AQ980_09530	COG4086	secreted protein
AQ980_09535	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AQ980_09540	COG0456	acetyltransferase
AQ980_09545	COG1547	Domain of unknown function (DUF309)
AQ980_09575	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AQ980_09595	COG3711	transcriptional antiterminator
AQ980_09600	COG1263	PTS System
AQ980_09600	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AQ980_09600	COG2190	(PTS) system
AQ980_09625	COG0778	Nitroreductase
AQ980_09630	COG2199	diguanylate cyclase activity
AQ980_09630	COG2203	Gaf domain
AQ980_09640	COG2084	Dehydrogenase
AQ980_09675	COG0436	Aminotransferase
AQ980_09680	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AQ980_09710	COG0640	Transcriptional regulator
AQ980_09715	COG1012	belongs to the aldehyde dehydrogenase family
AQ980_09740	COG4974	Belongs to the 'phage' integrase family
AQ980_09760	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_09765	COG1695	Transcriptional regulator
AQ980_09800	COG0183	Belongs to the thiolase family
AQ980_09835	COG3842	ATPase activity
AQ980_09840	COG0366	Alpha amylase catalytic
AQ980_09850	COG2182	Extracellular solute-binding protein
AQ980_09855	COG1175	transmembrane transport
AQ980_09860	COG3833	ABC-type maltose transport systems, permease component
AQ980_09865	COG1609	Transcriptional regulator
AQ980_09870	COG0436	Aminotransferase
AQ980_09880	COG2205	protein histidine kinase activity
AQ980_09890	COG3209	COG3209 Rhs family protein
AQ980_09915	COG2814	Major facilitator Superfamily
AQ980_09960	COG1408	metallophosphoesterase
AQ980_09965	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_09970	COG2200	EAL domain
AQ980_09985	COG4703	Protein of unknown function (DUF1797)
AQ980_09995	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
AQ980_10005	COG0517	IMP dehydrogenase activity
AQ980_10010	COG0583	DNA-binding transcription factor activity
AQ980_10030	COG0569	domain protein
AQ980_10035	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AQ980_10045	COG0561	phosphatase activity
AQ980_10060	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AQ980_10065	COG0022	dehydrogenase e1 component
AQ980_10110	COG1982	Orn Lys Arg decarboxylase major
AQ980_10130	COG0483	inositol monophosphate 1-phosphatase activity
AQ980_10155	COG4896	Protein conserved in bacteria
AQ980_10165	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AQ980_10170	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AQ980_10180	COG0772	Belongs to the SEDS family
AQ980_10185	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AQ980_10220	COG3336	cytochrome c oxidase
AQ980_10235	COG2340	Cysteine-rich secretory protein family
AQ980_10250	COG0406	alpha-ribazole phosphatase activity
AQ980_10255	COG3679	Belongs to the UPF0342 family
AQ980_10270	COG0742	ribosomal rna small subunit methyltransferase
AQ980_10280	COG3314	Sporulation integral membrane protein YlbJ
AQ980_10285	COG1752	Esterase of the alpha-beta hydrolase superfamily
AQ980_10290	COG3480	Lon protease (S16) C-terminal proteolytic domain
AQ980_10300	COG1399	metal-binding, possibly nucleic acid-binding protein
AQ980_10320	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AQ980_10345	COG0768	penicillin binding
AQ980_10365	COG0772	Belongs to the SEDS family
AQ980_10385	COG0849	cell division
AQ980_10390	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AQ980_10400	COG1191	sigma factor activity
AQ980_10405	COG1191	sigma factor activity
AQ980_10410	COG1873	PFAM PRC-barrel domain
AQ980_10420	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AQ980_10430	COG0762	integral membrane protein
AQ980_10435	COG2302	S4 RNA-binding domain
AQ980_10440	COG3599	regulation of cell shape
AQ980_10460	COG0564	pseudouridine synthase activity
AQ980_10520	COG3069	C4-dicarboxylate transmembrane transporter activity
AQ980_10535	COG0006	proline dipeptidase activity
AQ980_10545	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AQ980_10550	COG1561	YicC-like family, N-terminal region
AQ980_10570	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AQ980_10575	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AQ980_10590	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AQ980_10590	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AQ980_10600	COG0631	protein serine/threonine phosphatase activity
AQ980_10605	COG2815	serine threonine protein kinase
AQ980_10605	COG0515	serine threonine protein kinase
AQ980_10615	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AQ980_10620	COG1564	THIamine pyrophosphokinase
AQ980_10635	COG1302	Protein conserved in bacteria
AQ980_10640	COG1461	Dihydroxyacetone kinase
AQ980_10645	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AQ980_10660	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AQ980_10665	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_10680	COG1196	nuclear chromosome segregation
AQ980_10685	COG3344	reverse transcriptase
AQ980_10690	COG1196	nuclear chromosome segregation
AQ980_10695	COG0552	protein localization to endoplasmic reticulum
AQ980_10705	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AQ980_10715	COG1837	Belongs to the UPF0109 family
AQ980_10755	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AQ980_10760	COG0758	DNA mediated transformation
AQ980_10765	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AQ980_10775	COG4974	Belongs to the 'phage' integrase family
AQ980_10820	COG4589	Belongs to the CDS family
AQ980_10830	COG0750	zinc metalloprotease
AQ980_10850	COG0195	Participates in both transcription termination and antitermination
AQ980_10855	COG2740	Nucleic-acid-binding protein implicated in transcription termination
AQ980_10860	COG1358	cellular component organization or biogenesis
AQ980_10870	COG1550	Protein conserved in bacteria
AQ980_10885	COG0196	riboflavin kinase activity
AQ980_10900	COG0726	polysaccharide deacetylase
AQ980_10905	COG0612	Peptidase, M16
AQ980_10910	COG1873	PFAM PRC-barrel domain
AQ980_10915	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AQ980_10920	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AQ980_10925	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AQ980_10930	COG0527	aspartate kinase activity
AQ980_10945	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AQ980_10950	COG0740	serine-type endopeptidase activity
AQ980_10965	COG2188	Transcriptional regulator
AQ980_10990	COG0612	Peptidase, M16
AQ980_10995	COG0612	Peptidase, M16
AQ980_11000	COG0300	oxidoreductase activity
AQ980_11015	COG1426	Protein conserved in bacteria
AQ980_11020	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AQ980_11040	COG1692	metallophosphoesterase
AQ980_11045	COG2359	stage V sporulation protein S
AQ980_11055	COG0674	pyruvate-flavodoxin oxidoreductase activity
AQ980_11055	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AQ980_11060	COG1013	pyruvate-flavodoxin oxidoreductase activity
AQ980_11070	COG4550	Control of competence regulator ComK, YlbF/YmcA
AQ980_11095	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AQ980_11100	COG1368	sulfuric ester hydrolase activity
AQ980_11110	COG3773	Cell wall hydrolase
AQ980_11115	COG1404	Belongs to the peptidase S8 family
AQ980_11120	COG0823	Involved in the tonB-independent uptake of proteins
AQ980_11125	COG2723	6-phospho-beta-galactosidase activity
AQ980_11130	COG2188	Transcriptional regulator
AQ980_11140	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AQ980_11150	COG1346	cytolysis
AQ980_11170	COG1086	Polysaccharide biosynthesis protein
AQ980_11190	COG3300	MHYT domain
AQ980_11190	COG5001	Diguanylate cyclase
AQ980_11195	COG2267	carboxylic ester hydrolase activity
AQ980_11215	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AQ980_11220	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AQ980_11225	COG2169	Transcriptional regulator
AQ980_11230	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AQ980_11235	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_11240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_11245	COG1120	ATPase activity
AQ980_11250	COG2819	hydrolase of the alpha beta superfamily
AQ980_11260	COG1937	Protein conserved in bacteria
AQ980_11265	COG2608	mercury ion transmembrane transporter activity
AQ980_11270	COG2217	Heavy metal translocating P-type atpase
AQ980_11285	COG2116	formate transmembrane transporter activity
AQ980_11290	COG1408	metallophosphoesterase
AQ980_11300	COG1113	amino acid transport
AQ980_11315	COG2322	membrane
AQ980_11320	COG1979	alcohol dehydrogenase
AQ980_11325	COG1349	DNA-binding transcription factor activity
AQ980_11330	COG1105	Belongs to the carbohydrate kinase PfkB family
AQ980_11335	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AQ980_11335	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AQ980_11335	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AQ980_11340	COG1388	LysM domain
AQ980_11340	COG3584	3D domain protein
AQ980_11370	COG0464	growth
AQ980_11380	COG2860	membrane
AQ980_11385	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AQ980_11390	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
AQ980_11395	COG0789	Transcriptional regulator
AQ980_11400	COG0174	glutamine synthetase
AQ980_11405	COG1695	Transcriptional regulator
AQ980_11425	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AQ980_11445	COG0737	Belongs to the 5'-nucleotidase family
AQ980_11450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AQ980_11485	COG1132	(ABC) transporter
AQ980_11490	COG1132	(ABC) transporter
AQ980_11515	COG0730	response to heat
AQ980_11530	COG1346	cytolysis
AQ980_11540	COG0583	DNA-binding transcription factor activity
AQ980_11565	COG2801	Transposase and inactivated derivatives
AQ980_11570	COG2963	transposase activity
AQ980_11585	COG0785	Cytochrome C biogenesis protein
AQ980_11590	COG4846	Membrane protein involved in cytochrome C biogenesis
AQ980_11620	COG2226	methyltransferase
AQ980_11645	COG0010	Belongs to the arginase family
AQ980_11650	COG1329	Transcriptional regulator
AQ980_11660	COG3344	reverse transcriptase
AQ980_11670	COG0069	glutamate synthase activity
AQ980_11685	COG0346	lactoylglutathione lyase activity
AQ980_11690	COG0400	carboxylic ester hydrolase activity
AQ980_11695	COG5002	protein histidine kinase activity
AQ980_11705	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_11745	COG0830	nickel cation binding
AQ980_11765	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
AQ980_11790	COG1396	sequence-specific DNA binding
AQ980_11795	COG0318	PFAM AMP-dependent synthetase and ligase
AQ980_11800	COG1268	BioY protein
AQ980_11805	COG0318	PFAM AMP-dependent synthetase and ligase
AQ980_11810	COG0183	Belongs to the thiolase family
AQ980_11825	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AQ980_11835	COG2211	Major facilitator Superfamily
AQ980_11855	COG0726	polysaccharide deacetylase
AQ980_11865	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AQ980_11870	COG1132	(ABC) transporter
AQ980_11885	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AQ980_11920	COG0824	Thioesterase
AQ980_11925	COG4841	protein insertion into membrane
AQ980_11935	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AQ980_11935	COG1328	CTP reductase activity
AQ980_11945	COG0745	RESPONSE REGULATOR receiver
AQ980_11950	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AQ980_11955	COG1832	CoA-binding protein
AQ980_11965	COG0187	DNA topoisomerase II activity
AQ980_11970	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AQ980_11975	COG0673	inositol 2-dehydrogenase activity
AQ980_11995	COG1131	(ABC) transporter
AQ980_12005	COG1595	DNA-templated transcription, initiation
AQ980_12015	COG1316	TRANSCRIPTIONal
AQ980_12020	COG4166	transmembrane transport
AQ980_12025	COG4166	transmembrane transport
AQ980_12030	COG4166	transmembrane transport
AQ980_12035	COG2226	methyltransferase
AQ980_12070	COG0531	amino acid
AQ980_12085	COG0697	spore germination
AQ980_12095	COG3383	formate dehydrogenase (NAD+) activity
AQ980_12100	COG2427	Protein of unknown function (DUF1641)
AQ980_12105	COG5609	conserved protein (DUF2294)
AQ980_12110	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AQ980_12120	COG2116	formate transmembrane transporter activity
AQ980_12125	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AQ980_12130	COG0303	'Molybdopterin
AQ980_12135	COG0314	molybdopterin synthase activity
AQ980_12145	COG0489	protein tyrosine kinase activity
AQ980_12160	COG3326	Membrane
AQ980_12165	COG2962	Rard protein
AQ980_12170	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
AQ980_12175	COG1657	PFAM Prenyltransferase squalene oxidase
AQ980_12185	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_12190	COG1012	belongs to the aldehyde dehydrogenase family
AQ980_12200	COG4145	pantothenate transmembrane transporter activity
AQ980_12215	COG0165	Argininosuccinate lyase
AQ980_12225	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_12245	COG1051	belongs to the nudix hydrolase family
AQ980_12260	COG0716	FMN binding
AQ980_12270	COG1278	Cold shock
AQ980_12300	COG2720	vancomycin resistance protein
AQ980_12305	COG2514	catechol 2,3-dioxygenase activity
AQ980_12315	COG1285	pathogenesis
AQ980_12325	COG3852	Histidine kinase
AQ980_12390	COG1404	Belongs to the peptidase S8 family
AQ980_12425	COG0457	Tetratricopeptide repeat
AQ980_12435	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AQ980_12445	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AQ980_12470	COG3344	reverse transcriptase
AQ980_12500	COG0697	spore germination
AQ980_12510	COG3397	chitin binding
AQ980_12515	COG0823	Involved in the tonB-independent uptake of proteins
AQ980_12525	COG1252	NADH dehydrogenase
AQ980_12530	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AQ980_12530	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_12540	COG1183	phosphatidylcholine synthase activity
AQ980_12565	COG0277	FAD linked oxidase domain protein
AQ980_12570	COG0385	Bile acid
AQ980_12580	COG0457	Tetratricopeptide repeat
AQ980_12595	COG0604	alcohol dehydrogenase
AQ980_12600	COG0640	Transcriptional regulator
AQ980_12615	COG0584	glycerophosphoryl diester phosphodiesterase
AQ980_12640	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AQ980_12670	COG1164	Oligoendopeptidase f
AQ980_12675	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AQ980_12685	COG1193	negative regulation of DNA recombination
AQ980_12700	COG2890	protein-(glutamine-N5) methyltransferase activity
AQ980_12710	COG0583	DNA-binding transcription factor activity
AQ980_12725	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_12745	COG3739	integral membrane protein
AQ980_12750	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_12755	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_12760	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AQ980_12765	COG1247	-acetyltransferase
AQ980_12775	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AQ980_12780	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AQ980_12810	COG2814	Major facilitator Superfamily
AQ980_12815	COG1113	amino acid transport
AQ980_12870	COG1151	hydroxylamine reductase activity
AQ980_12925	COG1191	sigma factor activity
AQ980_12935	COG0726	polysaccharide deacetylase
AQ980_12950	COG1733	regulation of RNA biosynthetic process
AQ980_12955	COG2249	NAD(P)H dehydrogenase (quinone) activity
AQ980_12960	COG0318	PFAM AMP-dependent synthetase and ligase
AQ980_12980	COG0384	phenazine biosynthesis protein PhzF
AQ980_13000	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_13020	COG0673	inositol 2-dehydrogenase activity
AQ980_13025	COG2188	Transcriptional regulator
AQ980_13050	COG0814	amino acid
AQ980_13065	COG1733	regulation of RNA biosynthetic process
AQ980_13070	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AQ980_13075	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AQ980_13075	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AQ980_13085	COG0840	transmembrane signaling receptor activity
AQ980_13115	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AQ980_13120	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AQ980_13125	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AQ980_13130	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AQ980_13140	COG1070	Carbohydrate kinase
AQ980_13145	COG2706	6-phosphogluconolactonase activity
AQ980_13150	COG3813	Protein conserved in bacteria
AQ980_13155	COG1357	PFAM Pentapeptide repeats (8 copies)
AQ980_13165	COG0697	spore germination
AQ980_13195	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AQ980_13205	COG0789	Transcriptional regulator
AQ980_13210	COG1253	flavin adenine dinucleotide binding
AQ980_13240	COG0477	Major facilitator Superfamily
AQ980_13250	COG0500	methyltransferase
AQ980_13275	COG0628	permease
AQ980_13285	COG0180	Tryptophanyl-tRNA synthetase
AQ980_13320	COG1011	Hydrolase
AQ980_13345	COG1131	(ABC) transporter
AQ980_13355	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_13385	COG0778	Nitroreductase
AQ980_13390	COG1733	regulation of RNA biosynthetic process
AQ980_13400	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AQ980_13415	COG1288	antiporter activity
AQ980_13470	COG2249	NAD(P)H dehydrogenase (quinone) activity
AQ980_13480	COG2031	fatty acid transporter
AQ980_13495	COG2814	Major facilitator Superfamily
AQ980_13500	COG1846	Transcriptional regulator
AQ980_13515	COG0477	Major facilitator Superfamily
AQ980_13525	COG2843	Capsule synthesis protein
AQ980_13530	COG1876	peptidase activity
AQ980_13555	COG5444	nuclease activity
AQ980_13660	COG1396	sequence-specific DNA binding
AQ980_13675	COG0726	polysaccharide deacetylase
AQ980_13680	COG1309	transcriptional regulator
AQ980_13685	COG0367	asparagine synthase
AQ980_13715	COG1760	l-serine dehydratase
AQ980_13720	COG1760	l-serine dehydratase
AQ980_13725	COG0814	amino acid
AQ980_13750	COG1533	DNA photolyase activity
AQ980_13760	COG0076	glutamate decarboxylase activity
AQ980_13785	COG0772	Belongs to the SEDS family
AQ980_13790	COG2239	Acts as a magnesium transporter
AQ980_13800	COG0768	penicillin binding
AQ980_13805	COG1595	DNA-templated transcription, initiation
AQ980_13835	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_13850	COG1131	(ABC) transporter
AQ980_13860	COG1309	transcriptional regulator
AQ980_13875	COG1960	acyl-CoA dehydrogenase activity
AQ980_13880	COG0439	Biotin carboxylase
AQ980_13885	COG0511	ligase activity, forming carbon-carbon bonds
AQ980_13890	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AQ980_13895	COG1024	Enoyl-CoA hydratase
AQ980_13900	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AQ980_13905	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AQ980_13930	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_13945	COG0572	uridine kinase
AQ980_13960	COG1686	Belongs to the peptidase S11 family
AQ980_13990	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AQ980_14005	COG3227	Zinc metalloprotease (Elastase)
AQ980_14010	COG2207	Transcriptional regulator
AQ980_14065	COG1942	4-Oxalocrotonate Tautomerase
AQ980_14070	COG0583	DNA-binding transcription factor activity
AQ980_14080	COG1131	(ABC) transporter
AQ980_14110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AQ980_14115	COG2368	4-hydroxyphenylacetate
AQ980_14140	COG3344	reverse transcriptase
AQ980_14160	COG2323	membrane
AQ980_14165	COG0693	protein deglycase activity
AQ980_14175	COG3386	PFAM SMP-30 Gluconolaconase
AQ980_14185	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
AQ980_14190	COG3773	Cell wall hydrolase
AQ980_14200	COG0745	RESPONSE REGULATOR receiver
AQ980_14210	COG3344	reverse transcriptase
AQ980_14230	COG1136	(ABC) transporter
AQ980_14235	COG0577	efflux transmembrane transporter activity
AQ980_14255	COG0460	homoserine dehydrogenase
AQ980_14260	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AQ980_14270	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AQ980_14305	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_14330	COG2124	cytochrome p450
AQ980_14365	COG0561	phosphatase activity
AQ980_14370	COG5002	protein histidine kinase activity
AQ980_14385	COG1819	glycosyl
AQ980_14390	COG1794	racemase activity, acting on amino acids and derivatives
AQ980_14410	COG2205	protein histidine kinase activity
AQ980_14415	COG0582	viral genome integration into host DNA
AQ980_14450	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AQ980_14475	COG0745	RESPONSE REGULATOR receiver
AQ980_14480	COG5002	protein histidine kinase activity
AQ980_14485	COG0604	alcohol dehydrogenase
AQ980_14490	COG0671	phosphoesterase, PA-phosphatase related
AQ980_14540	COG2814	Major facilitator Superfamily
AQ980_14545	COG2814	Major facilitator Superfamily
AQ980_14565	COG0584	glycerophosphoryl diester phosphodiesterase
AQ980_14580	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AQ980_14585	COG0697	spore germination
AQ980_14630	COG2223	nitrite transmembrane transporter activity
AQ980_14645	COG0592	DNA-directed DNA polymerase activity
AQ980_14670	COG3878	Protein conserved in bacteria
AQ980_14695	COG4667	esterase of the alpha-beta hydrolase superfamily
AQ980_14735	COG0322	excinuclease ABC activity
AQ980_14755	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AQ980_14785	COG0745	RESPONSE REGULATOR receiver
AQ980_14790	COG5002	protein histidine kinase activity
AQ980_14805	COG1136	(ABC) transporter
AQ980_14810	COG0577	efflux transmembrane transporter activity
AQ980_14815	COG1073	alpha beta
AQ980_14825	COG0076	glutamate decarboxylase activity
AQ980_14840	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AQ980_14870	COG1523	belongs to the glycosyl hydrolase 13 family
AQ980_14875	COG3227	Zinc metalloprotease (Elastase)
AQ980_14880	COG0737	Belongs to the 5'-nucleotidase family
AQ980_14895	COG0201	protein transport
AQ980_14900	COG0697	spore germination
AQ980_14905	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AQ980_14945	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_14960	COG2959	enzyme of heme biosynthesis
AQ980_14965	COG3409	Peptidoglycan-binding domain 1 protein
AQ980_14965	COG3773	Cell wall hydrolase
AQ980_15000	COG1309	transcriptional regulator
AQ980_15030	COG3284	Transcriptional regulator
AQ980_15065	COG1959	2 iron, 2 sulfur cluster binding
AQ980_15075	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AQ980_15080	COG0508	dehydrogenase complex catalyzes the overall conversion of
AQ980_15085	COG0022	dehydrogenase e1 component
AQ980_15090	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AQ980_15100	COG2814	Major facilitator Superfamily
AQ980_15120	COG3344	reverse transcriptase
AQ980_15135	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_15140	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AQ980_15140	COG0456	acetyltransferase
AQ980_15180	COG4176	ABC-type proline glycine betaine transport system permease component
AQ980_15185	COG4175	Glycine betaine
AQ980_15185	COG0517	IMP dehydrogenase activity
AQ980_15195	COG0740	serine-type endopeptidase activity
AQ980_15215	COG2153	protein acetylation
AQ980_15220	COG3397	chitin binding
AQ980_15225	COG1819	glycosyl
AQ980_15245	COG2205	protein histidine kinase activity
AQ980_15250	COG2226	methyltransferase
AQ980_15255	COG2315	Protein conserved in bacteria
AQ980_15300	COG0456	acetyltransferase
AQ980_15305	COG3973	AAA domain
AQ980_15315	COG2105	PFAM AIG2 family protein
AQ980_15320	COG0514	ATP-dependent DNA helicase (RecQ)
AQ980_15340	COG2801	Transposase and inactivated derivatives
AQ980_15360	COG2801	Transposase and inactivated derivatives
AQ980_15380	COG4637	Psort location Cytoplasmic, score
AQ980_15395	COG3397	chitin binding
AQ980_15410	COG1162	GTPase activity
AQ980_15415	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AQ980_15420	COG1115	amino acid carrier protein
AQ980_15425	COG1012	belongs to the aldehyde dehydrogenase family
AQ980_15430	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AQ980_15440	COG3938	Belongs to the proline racemase family
AQ980_15445	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AQ980_15485	COG0586	Pfam SNARE associated Golgi protein
AQ980_15495	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AQ980_15505	COG4166	transmembrane transport
AQ980_15515	COG4948	Mandelate Racemase Muconate Lactonizing
AQ980_15530	COG0667	Aldo Keto reductase
AQ980_15575	COG5002	protein histidine kinase activity
AQ980_15575	COG3850	Histidine kinase
AQ980_15580	COG0745	RESPONSE REGULATOR receiver
AQ980_15600	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AQ980_15610	COG1164	Oligoendopeptidase f
AQ980_15615	COG1307	EDD domain protein, DegV family
AQ980_15655	COG2814	Major facilitator Superfamily
AQ980_15665	COG1664	Polymer-forming cytoskeletal
AQ980_15670	COG0789	Transcriptional regulator
AQ980_15675	COG4533	DNA binding
AQ980_15680	COG2814	Major facilitator Superfamily
AQ980_15680	COG0477	Major facilitator Superfamily
AQ980_15700	COG2261	transglycosylase associated protein
AQ980_15715	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AQ980_15750	COG0436	Aminotransferase
AQ980_15755	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AQ980_15765	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AQ980_15780	COG1131	(ABC) transporter
AQ980_15835	COG0628	permease
AQ980_15850	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AQ980_15855	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AQ980_15860	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AQ980_15890	COG2746	aminoglycoside 3-N-acetyltransferase activity
AQ980_15910	COG0697	spore germination
AQ980_15930	COG4912	Dna alkylation repair
AQ980_15935	COG0346	lactoylglutathione lyase activity
AQ980_15940	COG0726	polysaccharide deacetylase
AQ980_15945	COG0861	Integral membrane protein TerC family
AQ980_15950	COG1368	sulfuric ester hydrolase activity
AQ980_15955	COG0488	(ABC) transporter
AQ980_15970	COG2409	Drug exporters of the RND superfamily
AQ980_15970	COG1033	growth of symbiont in host cell
AQ980_15975	COG1309	transcriptional regulator
AQ980_15990	COG0287	Prephenate dehydrogenase
AQ980_16005	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AQ980_16005	COG1605	Chorismate mutase
AQ980_16045	COG1388	LysM domain
AQ980_16045	COG3584	3D domain protein
AQ980_16055	COG0277	FAD linked oxidase domain protein
AQ980_16075	COG1879	ABC-type sugar transport system periplasmic component
AQ980_16085	COG1172	Belongs to the binding-protein-dependent transport system permease family
AQ980_16095	COG2390	Transcriptional regulator
AQ980_16100	COG1070	Carbohydrate kinase
AQ980_16125	COG2329	Antibiotic biosynthesis monooxygenase
AQ980_16145	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AQ980_16155	COG2801	Transposase and inactivated derivatives
AQ980_16170	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AQ980_16175	COG4187	Peptidase family M20/M25/M40
AQ980_16180	COG1414	Transcriptional regulator
AQ980_16185	COG0833	amino acid
AQ980_16195	COG3239	Fatty acid desaturase
AQ980_16205	COG2720	vancomycin resistance protein
AQ980_16210	COG1785	Belongs to the alkaline phosphatase family
AQ980_16220	COG3655	Transcriptional regulator
AQ980_16240	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_16245	COG0346	lactoylglutathione lyase activity
AQ980_16275	COG0714	Associated with various cellular activities
AQ980_16300	COG0463	Glycosyl transferase, family 2
AQ980_16320	COG0463	Glycosyl transferase, family 2
AQ980_16345	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AQ980_16350	COG0753	catalase activity
AQ980_16390	COG0714	Associated with various cellular activities
AQ980_16470	COG0778	Nitroreductase
AQ980_16475	COG1846	Transcriptional regulator
AQ980_16495	COG3831	ATPase activity
AQ980_16495	COG4884	unkown
AQ980_16520	COG0590	tRNA wobble adenosine to inosine editing
AQ980_16520	COG0037	tRNA processing
AQ980_16525	COG0456	acetyltransferase
AQ980_16540	COG0697	spore germination
AQ980_16545	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AQ980_16585	COG0730	response to heat
AQ980_16595	COG0833	amino acid
AQ980_16675	COG1984	allophanate hydrolase subunit 2
AQ980_16680	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AQ980_16685	COG1414	Transcriptional regulator
AQ980_16695	COG3142	Participates in the control of copper homeostasis
AQ980_16700	COG0640	Transcriptional regulator
AQ980_16710	COG1960	acyl-CoA dehydrogenase activity
AQ980_16735	COG0454	-acetyltransferase
AQ980_16745	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
AQ980_16755	COG2801	Transposase and inactivated derivatives
AQ980_16760	COG2963	transposase activity
AQ980_16790	COG1522	sequence-specific DNA binding
AQ980_16795	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_16800	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_16820	COG1063	alcohol dehydrogenase
AQ980_16825	COG5002	protein histidine kinase activity
AQ980_16850	COG2207	Transcriptional regulator
AQ980_16870	COG0737	Belongs to the 5'-nucleotidase family
AQ980_16875	COG2267	carboxylic ester hydrolase activity
AQ980_16880	COG1335	isochorismatase
AQ980_16900	COG0583	DNA-binding transcription factor activity
AQ980_16935	COG0598	Magnesium transport protein CorA
AQ980_16980	COG0415	Belongs to the DNA photolyase family
AQ980_17005	COG0657	acetylesterase activity
AQ980_17010	COG0288	reversible hydration of carbon dioxide
AQ980_17020	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AQ980_17025	COG5609	conserved protein (DUF2294)
AQ980_17030	COG0726	polysaccharide deacetylase
AQ980_17040	COG1575	Belongs to the MenA family. Type 1 subfamily
AQ980_17050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_17060	COG0798	PFAM Bile acid sodium symporter
AQ980_17065	COG0346	lactoylglutathione lyase activity
AQ980_17070	COG0640	Transcriptional regulator
AQ980_17080	COG2814	Major facilitator Superfamily
AQ980_17085	COG1309	transcriptional regulator
AQ980_17090	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_17095	COG1522	sequence-specific DNA binding
AQ980_17110	COG0346	lactoylglutathione lyase activity
AQ980_17180	COG2814	Major facilitator Superfamily
AQ980_17200	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AQ980_17210	COG1690	Belongs to the RtcB family
AQ980_17220	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AQ980_17240	COG0577	efflux transmembrane transporter activity
AQ980_17245	COG3850	Histidine kinase
AQ980_17245	COG5002	protein histidine kinase activity
AQ980_17255	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_17285	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AQ980_17315	COG3831	ATPase activity
AQ980_17325	COG5632	N-Acetylmuramoyl-L-alanine amidase
AQ980_17325	COG3409	Peptidoglycan-binding domain 1 protein
AQ980_17400	COG2239	Acts as a magnesium transporter
AQ980_17405	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_17415	COG0741	lytic transglycosylase activity
AQ980_17475	COG2814	Major facilitator Superfamily
AQ980_17485	COG1686	Belongs to the peptidase S11 family
AQ980_17490	COG0110	maltose O-acetyltransferase activity
AQ980_17495	COG0730	response to heat
AQ980_17505	COG2801	Transposase and inactivated derivatives
AQ980_17510	COG2963	transposase activity
AQ980_17515	COG2002	toxin-antitoxin pair type II binding
AQ980_17540	COG2195	Cleaves the N-terminal amino acid of tripeptides
AQ980_17570	COG1846	Transcriptional regulator
AQ980_17575	COG3961	Belongs to the TPP enzyme family
AQ980_17580	COG2226	methyltransferase
AQ980_17590	COG3615	Tellurite resistance protein tehB
AQ980_17590	COG0500	methyltransferase
AQ980_17605	COG1309	transcriptional regulator
AQ980_17625	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_17645	COG1846	Transcriptional regulator
AQ980_17665	COG2971	BadF BadG BcrA BcrD
AQ980_17690	COG1649	PFAM Uncharacterised BCR, COG1649
AQ980_17715	COG1595	DNA-templated transcription, initiation
AQ980_17720	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AQ980_17755	COG1396	sequence-specific DNA binding
AQ980_17785	COG1132	(ABC) transporter
AQ980_17790	COG1132	(ABC) transporter
AQ980_17805	COG2258	MOSC domain
AQ980_17810	COG0583	DNA-binding transcription factor activity
AQ980_17830	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AQ980_17835	COG0583	DNA-binding transcription factor activity
AQ980_17865	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_17900	COG1247	-acetyltransferase
AQ980_17935	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_17960	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AQ980_18000	COG0028	Belongs to the TPP enzyme family
AQ980_18010	COG1136	(ABC) transporter
AQ980_18015	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AQ980_18020	COG1187	pseudouridine synthase activity
AQ980_18025	COG2329	Antibiotic biosynthesis monooxygenase
AQ980_18040	COG1115	amino acid carrier protein
AQ980_18050	COG2318	DinB family
AQ980_18060	COG0776	regulation of translation
AQ980_18075	COG2814	Major facilitator Superfamily
AQ980_18080	COG3251	PFAM MbtH domain protein
AQ980_18085	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AQ980_18090	COG3433	isochorismatase activity
AQ980_18090	COG1535	isochorismatase
AQ980_18095	COG1021	2,3-dihydroxybenzoate-AMP ligase
AQ980_18100	COG1169	isochorismate synthase
AQ980_18105	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_18110	COG2223	nitrite transmembrane transporter activity
AQ980_18135	COG0419	ATPase involved in DNA repair
AQ980_18140	COG0420	3'-5' exonuclease activity
AQ980_18155	COG1024	Enoyl-CoA hydratase
AQ980_18160	COG1280	lysine exporter protein (LysE YggA)
AQ980_18170	COG2084	Dehydrogenase
AQ980_18175	COG1960	acyl-CoA dehydrogenase activity
AQ980_18180	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AQ980_18185	COG2079	MmgE PrpD family protein
AQ980_18190	COG0372	Belongs to the citrate synthase family
AQ980_18195	COG4841	protein insertion into membrane
AQ980_18200	COG2814	Major facilitator Superfamily
AQ980_18210	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AQ980_18210	COG4499	WXG100 protein secretion system (Wss), protein YukC
AQ980_18230	COG0300	oxidoreductase activity
AQ980_18310	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AQ980_18315	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AQ980_18320	COG0671	phosphoesterase, PA-phosphatase related
AQ980_18330	COG3064	Membrane
AQ980_18330	COG4991	sh3 domain protein
AQ980_18330	COG0515	serine threonine protein kinase
AQ980_18365	COG1509	lysine 2,3-aminomutase activity
AQ980_18370	COG3829	transcription factor binding
AQ980_18375	COG0456	acetyltransferase
AQ980_18380	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AQ980_18385	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AQ980_18390	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AQ980_18395	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AQ980_18410	COG5506	Protein of unknown function (DUF1694)
AQ980_18415	COG1012	belongs to the aldehyde dehydrogenase family
AQ980_18420	COG1253	flavin adenine dinucleotide binding
AQ980_18455	COG1174	glycine betaine transport
AQ980_18460	COG1125	glycine betaine transport
AQ980_18460	COG0517	IMP dehydrogenase activity
AQ980_18495	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AQ980_18520	COG1064	alcohol dehydrogenase
AQ980_18525	COG0384	phenazine biosynthesis protein PhzF
AQ980_18530	COG1737	Transcriptional regulator
AQ980_18535	COG2197	response regulator
AQ980_18540	COG4585	Histidine kinase
AQ980_18540	COG2203	Gaf domain
AQ980_18545	COG0668	transmembrane transport
AQ980_18555	COG1335	isochorismatase
AQ980_18575	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AQ980_18580	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AQ980_18600	COG0367	asparagine synthase
AQ980_18605	COG0071	Belongs to the small heat shock protein (HSP20) family
AQ980_18610	COG1999	signal sequence binding
AQ980_18620	COG1307	EDD domain protein, DegV family
AQ980_18630	COG0805	protein transport
AQ980_18640	COG1272	protein, Hemolysin III
AQ980_18645	COG0204	Acyl-transferase
AQ980_18655	COG0768	penicillin binding
AQ980_18670	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AQ980_18685	COG0546	phosphoglycolate phosphatase activity
AQ980_18695	COG4473	ABC transporter
AQ980_18700	COG1131	(ABC) transporter
AQ980_18710	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AQ980_18715	COG3655	Transcriptional regulator
AQ980_18725	COG0456	acetyltransferase
AQ980_18735	COG1794	racemase activity, acting on amino acids and derivatives
AQ980_18745	COG2610	gluconate transmembrane transporter activity
AQ980_18770	COG0733	neurotransmitter:sodium symporter activity
AQ980_18775	COG0017	Asparaginyl-tRNA synthetase
AQ980_18785	COG2963	transposase activity
AQ980_18790	COG2801	Transposase and inactivated derivatives
AQ980_18835	COG0018	arginyl-trna synthetase
AQ980_18840	COG2136	Putative SAM-dependent methyltransferase
AQ980_18840	COG2521	methyltransferase
AQ980_18855	COG1413	lyase activity
AQ980_18865	COG0629	single-stranded DNA binding
AQ980_18975	COG0488	(ABC) transporter
AQ980_18980	COG1418	mRNA catabolic process
AQ980_18995	COG0457	Tetratricopeptide repeat
AQ980_19020	COG0730	response to heat
AQ980_19045	COG2359	stage V sporulation protein S
AQ980_19080	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
AQ980_19085	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AQ980_19090	COG2146	nitrite reductase [NAD(P)H] activity
AQ980_19095	COG1587	Uroporphyrinogen-III synthase
AQ980_19095	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AQ980_19105	COG1648	precorrin-2 dehydrogenase activity
AQ980_19115	COG2223	nitrite transmembrane transporter activity
AQ980_19120	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AQ980_19125	COG0314	molybdopterin synthase activity
AQ980_19130	COG0303	'Molybdopterin
AQ980_19135	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AQ980_19140	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AQ980_19145	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AQ980_19150	COG2181	nitrate reductase activity
AQ980_19155	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AQ980_19160	COG1140	nitrate reductase beta subunit
AQ980_19165	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AQ980_19175	COG0714	Associated with various cellular activities
AQ980_19180	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
AQ980_19185	COG1305	Transglutaminase-like
AQ980_19190	COG0386	Belongs to the glutathione peroxidase family
AQ980_19205	COG0426	domain, Protein
AQ980_19205	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AQ980_19220	COG1595	DNA-templated transcription, initiation
AQ980_19230	COG0604	alcohol dehydrogenase
AQ980_19240	COG0346	lactoylglutathione lyase activity
AQ980_19245	COG1082	Xylose isomerase domain protein TIM barrel
AQ980_19265	COG2226	methyltransferase
AQ980_19290	COG3874	Sporulation protein YtfJ
AQ980_19385	COG4499	WXG100 protein secretion system (Wss), protein YukC
AQ980_19420	COG0456	acetyltransferase
AQ980_19450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AQ980_19455	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_19460	COG1819	glycosyl
AQ980_19470	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AQ980_19535	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_19570	COG3344	reverse transcriptase
AQ980_19620	COG0740	serine-type endopeptidase activity
AQ980_19630	COG4626	Terminase
AQ980_19630	COG1802	Transcriptional regulator
AQ980_19680	COG0582	viral genome integration into host DNA
AQ980_19755	COG3646	Phage regulatory protein
AQ980_19795	COG0860	N-Acetylmuramoyl-L-alanine amidase
AQ980_19810	COG2211	Major facilitator Superfamily
AQ980_19825	COG1876	peptidase activity
AQ980_19835	COG0860	N-Acetylmuramoyl-L-alanine amidase
AQ980_19855	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AQ980_19860	COG1114	Component of the transport system for branched-chain amino acids
AQ980_19865	COG2963	transposase activity
AQ980_19870	COG2801	Transposase and inactivated derivatives
AQ980_19885	COG1253	flavin adenine dinucleotide binding
AQ980_19890	COG2839	Protein conserved in bacteria
AQ980_19895	COG0702	epimerase
AQ980_19910	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AQ980_19915	COG1607	acyl-coa hydrolase
AQ980_19920	COG3689	TIGRFAM TIGR03943 family protein
AQ980_19925	COG0701	Predicted permease
AQ980_19935	COG2244	polysaccharide biosynthetic process
AQ980_19940	COG0586	Pfam SNARE associated Golgi protein
AQ980_19945	COG1051	belongs to the nudix hydrolase family
AQ980_19950	COG5337	Spore coat protein CotH
AQ980_19975	COG4166	transmembrane transport
AQ980_19985	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AQ980_19995	COG0702	epimerase
AQ980_20005	COG3344	reverse transcriptase
AQ980_20025	COG0803	Belongs to the bacterial solute-binding protein 9 family
AQ980_20030	COG0456	acetyltransferase
AQ980_20035	COG0523	cobalamin synthesis protein
AQ980_20045	COG4989	oxidoreductase activity
AQ980_20050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_20055	COG1231	oxidoreductase activity
AQ980_20065	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AQ980_20075	COG2801	Transposase and inactivated derivatives
AQ980_20090	COG0783	Belongs to the Dps family
AQ980_20095	COG3949	Membrane
AQ980_20115	COG0840	transmembrane signaling receptor activity
AQ980_20140	COG3152	Membrane
AQ980_20150	COG2814	Major facilitator Superfamily
AQ980_20155	COG0667	Aldo Keto reductase
AQ980_20160	COG0640	Transcriptional regulator
AQ980_20165	COG1404	Belongs to the peptidase S8 family
AQ980_20170	COG2002	toxin-antitoxin pair type II binding
AQ980_20175	COG0577	efflux transmembrane transporter activity
AQ980_20210	COG1752	Esterase of the alpha-beta hydrolase superfamily
AQ980_20220	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AQ980_20225	COG1279	arginine transmembrane transporter activity
AQ980_20230	COG2814	Major facilitator Superfamily
AQ980_20240	COG1082	Xylose isomerase domain protein TIM barrel
AQ980_20255	COG0318	PFAM AMP-dependent synthetase and ligase
AQ980_20295	COG1247	-acetyltransferase
AQ980_20300	COG1285	pathogenesis
AQ980_20310	COG0726	polysaccharide deacetylase
AQ980_20315	COG5002	protein histidine kinase activity
AQ980_20320	COG0745	RESPONSE REGULATOR receiver
AQ980_20330	COG1316	TRANSCRIPTIONal
AQ980_20355	COG0460	homoserine dehydrogenase
AQ980_20360	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_20380	COG0726	polysaccharide deacetylase
AQ980_20390	COG0300	oxidoreductase activity
AQ980_20395	COG5002	protein histidine kinase activity
AQ980_20400	COG0745	RESPONSE REGULATOR receiver
AQ980_20405	COG1132	(ABC) transporter
AQ980_20415	COG1388	LysM domain
AQ980_20415	COG0791	NLP P60 protein
AQ980_20430	COG1686	Belongs to the peptidase S11 family
AQ980_20470	COG1216	Glycosyl transferase, family 2
AQ980_20480	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AQ980_20485	COG4988	ABC transporter
AQ980_20490	COG1294	oxidase, subunit
AQ980_20495	COG1271	oxidase subunit
AQ980_20525	COG0583	DNA-binding transcription factor activity
AQ980_20545	COG0411	ABC transporter
AQ980_20555	COG0523	cobalamin synthesis protein
AQ980_20560	COG1231	oxidoreductase activity
AQ980_20570	COG0628	permease
AQ980_20585	COG0778	Nitroreductase
AQ980_20590	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AQ980_20595	COG1959	2 iron, 2 sulfur cluster binding
AQ980_20600	COG0583	DNA-binding transcription factor activity
AQ980_20605	COG0697	spore germination
AQ980_20610	COG4549	nuclear export factor GLE1
AQ980_20615	COG1276	copper resistance
AQ980_20615	COG2372	response to copper ion
AQ980_20625	COG1114	Component of the transport system for branched-chain amino acids
AQ980_20655	COG2132	Multicopper oxidase
AQ980_20665	COG0006	proline dipeptidase activity
AQ980_20675	COG4846	Membrane protein involved in cytochrome C biogenesis
AQ980_20690	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AQ980_20695	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AQ980_20705	COG2390	Transcriptional regulator
AQ980_20710	COG1309	transcriptional regulator
AQ980_20745	COG0531	amino acid
AQ980_20755	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AQ980_20770	COG1914	H( )-stimulated, divalent metal cation uptake system
AQ980_20775	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_20780	COG4166	transmembrane transport
AQ980_20800	COG0427	acetyl-CoA hydrolase
AQ980_20805	COG3279	Response regulator of the LytR AlgR family
AQ980_20815	COG3384	dioxygenase
AQ980_20820	COG2814	Major facilitator Superfamily
AQ980_20845	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AQ980_20865	COG0028	Belongs to the TPP enzyme family
AQ980_20870	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AQ980_20880	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AQ980_20900	COG2323	membrane
AQ980_20905	COG5566	PFAM Mor transcription activator
AQ980_20910	COG0733	neurotransmitter:sodium symporter activity
AQ980_20930	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AQ980_20935	COG2223	nitrite transmembrane transporter activity
AQ980_20940	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AQ980_20950	COG0477	Major facilitator Superfamily
AQ980_20960	COG1695	Transcriptional regulator
AQ980_20975	COG2814	Major facilitator Superfamily
AQ980_21015	COG3620	sequence-specific DNA binding
AQ980_21025	COG2801	Transposase and inactivated derivatives
AQ980_21045	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AQ980_21050	COG0784	Response regulator, receiver
AQ980_21055	COG4191	Histidine kinase
AQ980_21060	COG0281	malic enzyme
AQ980_21065	COG1027	Aspartate ammonia-lyase
AQ980_21080	COG0528	UMP kinase activity
AQ980_21085	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AQ980_21105	COG1131	(ABC) transporter
AQ980_21140	COG2733	membrane
AQ980_21160	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AQ980_21180	COG3340	Belongs to the peptidase S51 family
AQ980_21185	COG0534	Mate efflux family protein
AQ980_21220	COG0789	Transcriptional regulator
AQ980_21225	COG1757	Na H antiporter
AQ980_21240	COG0701	Predicted permease
AQ980_21245	COG0523	cobalamin synthesis protein
AQ980_21255	COG0697	spore germination
AQ980_21260	COG1802	Transcriptional regulator
AQ980_21290	COG0367	asparagine synthase
AQ980_21310	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_21325	COG0406	alpha-ribazole phosphatase activity
AQ980_21355	COG1177	transmembrane transport
AQ980_21360	COG0725	ABC transporter, periplasmic molybdate-binding protein
AQ980_21365	COG3842	ATPase activity
AQ980_21430	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AQ980_21435	COG4786	Flagellar basal body rod
AQ980_21440	COG1419	protein localization to endoplasmic reticulum
AQ980_21445	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AQ980_21450	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AQ980_21460	COG1987	bacterial-type flagellum assembly
AQ980_21465	COG1338	Plays a role in the flagellum-specific transport system
AQ980_21475	COG1776	CheC inhibitor of MCP methylation
AQ980_21475	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AQ980_21480	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AQ980_21490	COG0741	lytic transglycosylase activity
AQ980_21495	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AQ980_21500	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AQ980_21505	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AQ980_21510	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AQ980_21520	COG0784	Response regulator, receiver
AQ980_21520	COG0835	chemotaxis
AQ980_21555	COG1157	protein secretion by the type III secretion system
AQ980_21565	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AQ980_21570	COG1766	The M ring may be actively involved in energy transduction
AQ980_21575	COG1677	Flagellar hook-basal body complex protein FliE
AQ980_21580	COG1558	bacterial-type flagellum-dependent cell motility
AQ980_21585	COG1815	bacterial-type flagellum-dependent cell motility
AQ980_21605	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AQ980_21610	COG1256	bacterial-type flagellum assembly
AQ980_21630	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AQ980_21645	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AQ980_21645	COG1776	CheC inhibitor of MCP methylation
AQ980_21650	COG2198	Histidine kinase
AQ980_21650	COG0643	Histidine kinase
AQ980_21655	COG2201	protein-glutamate methylesterase activity
AQ980_21660	COG1360	Flagellar Motor Protein
AQ980_21665	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AQ980_21675	COG1923	regulation of RNA biosynthetic process
AQ980_21715	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AQ980_21720	COG2323	membrane
AQ980_21730	COG0789	Transcriptional regulator
AQ980_21730	COG4978	Transcriptional regulator
AQ980_21735	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AQ980_21740	COG0475	glutathione-regulated potassium exporter activity
AQ980_21750	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AQ980_21755	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AQ980_21775	COG1280	lysine exporter protein (LysE YggA)
AQ980_21780	COG3403	YqcI/YcgG family
AQ980_21815	COG0328	RNA-DNA hybrid ribonuclease activity
AQ980_21835	COG0454	-acetyltransferase
AQ980_21850	COG0438	transferase activity, transferring glycosyl groups
AQ980_21855	COG1215	transferase activity, transferring glycosyl groups
AQ980_21870	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AQ980_21880	COG3944	biosynthesis protein
AQ980_21895	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AQ980_21935	COG0456	acetyltransferase
AQ980_21945	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AQ980_21950	COG2311	Membrane
AQ980_21955	COG2233	PERMEase
AQ980_21965	COG0024	Methionine aminopeptidase
AQ980_21975	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AQ980_21980	COG1199	ATP-dependent helicase activity
AQ980_21990	COG0116	Belongs to the methyltransferase superfamily
AQ980_22040	COG4499	WXG100 protein secretion system (Wss), protein YukC
AQ980_22040	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AQ980_22050	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AQ980_22055	COG3935	DnaD domain protein
AQ980_22075	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AQ980_22075	COG1199	ATP-dependent helicase activity
AQ980_22115	COG0438	transferase activity, transferring glycosyl groups
AQ980_22135	COG1694	Mazg nucleotide pyrophosphohydrolase
AQ980_22140	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_22150	COG2801	Transposase and inactivated derivatives
AQ980_22160	COG2738	Putative neutral zinc metallopeptidase
AQ980_22175	COG4347	Protein of unknown function (DUF1405)
AQ980_22180	COG2010	Cytochrome c
AQ980_22180	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AQ980_22185	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AQ980_22205	COG0457	Tetratricopeptide repeat
AQ980_22235	COG0142	geranyltranstransferase activity
AQ980_22245	COG0142	geranyltranstransferase activity
AQ980_22260	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AQ980_22330	COG0252	asparaginase activity
AQ980_22335	COG0492	ferredoxin-NADP+ reductase activity
AQ980_22355	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AQ980_22365	COG0789	Transcriptional regulator
AQ980_22370	COG1408	metallophosphoesterase
AQ980_22380	COG1266	CAAX protease self-immunity
AQ980_22385	COG0514	ATP-dependent DNA helicase (RecQ)
AQ980_22395	COG1141	Ferredoxin
AQ980_22400	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AQ980_22415	COG2096	Adenosyltransferase
AQ980_22420	COG5002	protein histidine kinase activity
AQ980_22425	COG0745	RESPONSE REGULATOR receiver
AQ980_22430	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AQ980_22435	COG1333	cytochrome c biogenesis protein
AQ980_22445	COG1187	pseudouridine synthase activity
AQ980_22450	COG0700	Nucleoside recognition
AQ980_22455	COG2715	membrane protein required for spore maturation
AQ980_22460	COG1686	Belongs to the peptidase S11 family
AQ980_22465	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AQ980_22480	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AQ980_22480	COG0392	lysyltransferase activity
AQ980_22495	COG5002	protein histidine kinase activity
AQ980_22500	COG0582	viral genome integration into host DNA
AQ980_22510	COG1801	Protein of unknown function DUF72
AQ980_22515	COG3852	Histidine kinase
AQ980_22530	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AQ980_22535	COG1392	Phosphate transport regulator
AQ980_22540	COG0306	phosphate transporter
AQ980_22545	COG0730	response to heat
AQ980_22600	COG1114	Component of the transport system for branched-chain amino acids
AQ980_22610	COG2197	response regulator
AQ980_22615	COG4585	Histidine kinase
AQ980_22620	COG4758	membrane
AQ980_22635	COG1757	Na H antiporter
AQ980_22655	COG0733	neurotransmitter:sodium symporter activity
AQ980_22665	COG1648	precorrin-2 dehydrogenase activity
AQ980_22685	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AQ980_22690	COG0529	Catalyzes the synthesis of activated sulfate
AQ980_22710	COG0019	diaminopimelate decarboxylase activity
AQ980_22720	COG1368	sulfuric ester hydrolase activity
AQ980_22725	COG1183	phosphatidylcholine synthase activity
AQ980_22740	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AQ980_22815	COG0440	acetolactate synthase activity
AQ980_22820	COG0028	Belongs to the TPP enzyme family
AQ980_22825	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AQ980_22855	COG3874	Sporulation protein YtfJ
AQ980_22860	COG4709	membrane
AQ980_22865	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AQ980_22870	COG1301	dicarboxylic acid transport
AQ980_22880	COG1846	Transcriptional regulator
AQ980_22930	COG0716	FMN binding
AQ980_22955	COG1696	Membrane protein involved in D-alanine export
AQ980_22965	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AQ980_22970	COG2070	2-Nitropropane dioxygenase
AQ980_22975	COG1619	proteins homologs of microcin C7 resistance protein MccF
AQ980_22985	COG1335	isochorismatase
AQ980_22995	COG1522	sequence-specific DNA binding
AQ980_23015	COG1131	(ABC) transporter
AQ980_23025	COG1131	(ABC) transporter
AQ980_23030	COG1725	Transcriptional regulator
AQ980_23045	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AQ980_23050	COG1780	Probably involved in ribonucleotide reductase function
AQ980_23090	COG4873	Protein conserved in bacteria
AQ980_23105	COG0720	synthase
AQ980_23115	COG5002	protein histidine kinase activity
AQ980_23125	COG2318	DinB family
AQ980_23135	COG1846	Transcriptional regulator
AQ980_23140	COG3852	Histidine kinase
AQ980_23150	COG2861	carbohydrate metabolic process
AQ980_23160	COG0235	Class ii aldolase
AQ980_23175	COG1349	DNA-binding transcription factor activity
AQ980_23200	COG3842	ATPase activity
AQ980_23205	COG1840	ABC-type Fe3 transport system, periplasmic component
AQ980_23220	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AQ980_23230	COG3243	poly(R)-hydroxyalkanoic acid synthase
AQ980_23235	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_23255	COG2030	dehydratase
AQ980_23265	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AQ980_23270	COG0861	Integral membrane protein TerC family
AQ980_23275	COG2116	formate transmembrane transporter activity
AQ980_23285	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AQ980_23305	COG2186	Transcriptional regulator
AQ980_23310	COG5002	protein histidine kinase activity
AQ980_23315	COG0745	RESPONSE REGULATOR receiver
AQ980_23325	COG3835	regulator
AQ980_23330	COG0277	FAD linked oxidase domain protein
AQ980_23335	COG0247	lactate metabolic process
AQ980_23340	COG2340	Cysteine-rich secretory protein family
AQ980_23350	COG0564	pseudouridine synthase activity
AQ980_23360	COG2409	Drug exporters of the RND superfamily
AQ980_23370	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AQ980_23375	COG1177	transmembrane transport
AQ980_23380	COG1176	ABC-type spermidine putrescine transport system, permease component I
AQ980_23390	COG1012	belongs to the aldehyde dehydrogenase family
AQ980_23425	COG0681	Belongs to the peptidase S26 family
AQ980_23430	COG1686	Belongs to the peptidase S11 family
AQ980_23440	COG2226	methyltransferase
AQ980_23460	COG1668	transmembrane transport
AQ980_23465	COG4152	abc transporter atp-binding protein
AQ980_23480	COG2801	Transposase and inactivated derivatives
AQ980_23515	COG1476	TRANSCRIPTIONal
AQ980_23525	COG0508	dehydrogenase complex catalyzes the overall conversion of
AQ980_23545	COG2226	methyltransferase
AQ980_23550	COG2801	Transposase and inactivated derivatives
AQ980_23595	COG5634	Uncharacterized conserved protein (DUF2278)
AQ980_23600	COG1620	l-lactate permease
AQ980_23635	COG0512	Glutamine amidotransferase of anthranilate synthase
AQ980_23635	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AQ980_23650	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AQ980_23675	COG2382	esterase
AQ980_23685	COG2153	protein acetylation
AQ980_23730	COG1091	dTDP-4-dehydrorhamnose reductase activity
AQ980_23745	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AQ980_23765	COG0463	Glycosyl transferase, family 2
AQ980_23765	COG0457	Tetratricopeptide repeat
AQ980_23785	COG1216	Glycosyl transferase, family 2
AQ980_23790	COG0772	Belongs to the SEDS family
AQ980_23805	COG0564	pseudouridine synthase activity
AQ980_23815	COG2357	RelA SpoT domain protein
AQ980_23825	COG4116	CYTH
AQ980_23830	COG2346	COG2346, Truncated hemoglobins
AQ980_23845	COG1164	Oligoendopeptidase f
AQ980_23855	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AQ980_23865	COG0861	Integral membrane protein TerC family
AQ980_23870	COG1393	Belongs to the ArsC family
AQ980_23885	COG4166	transmembrane transport
AQ980_23890	COG0534	Mate efflux family protein
AQ980_23895	COG4608	Belongs to the ABC transporter superfamily
AQ980_23900	COG0444	Belongs to the ABC transporter superfamily
AQ980_23905	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AQ980_23910	COG0601	transmembrane transport
AQ980_23915	COG4166	transmembrane transport
AQ980_23930	COG0180	Tryptophanyl-tRNA synthetase
AQ980_23945	COG5504	Zn-dependent protease
AQ980_23950	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AQ980_23955	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AQ980_23970	COG2267	carboxylic ester hydrolase activity
AQ980_23995	COG0561	phosphatase activity
AQ980_24010	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AQ980_24035	COG2996	Protein conserved in bacteria
AQ980_24055	COG0004	ammonium transporteR
AQ980_24060	COG3339	Conserved Protein
AQ980_24085	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AQ980_24095	COG0753	catalase activity
AQ980_24105	COG0367	asparagine synthase
AQ980_24130	COG5632	N-Acetylmuramoyl-L-alanine amidase
AQ980_24130	COG3409	Peptidoglycan-binding domain 1 protein
AQ980_24130	COG1388	LysM domain
AQ980_24135	COG4824	toxin secretion phage lysis holin
AQ980_24205	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_24240	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_24260	COG3331	DNA recombination
AQ980_24355	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AQ980_24370	COG0367	asparagine synthase
AQ980_24395	COG0179	Fumarylacetoacetate (FAA) hydrolase
AQ980_24455	COG0398	Pfam SNARE associated Golgi protein
AQ980_24475	COG1278	Cold shock
AQ980_24490	COG2224	Isocitrate lyase
AQ980_24495	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AQ980_24505	COG3693	PFAM glycoside hydrolase, family 10
AQ980_24510	COG0840	transmembrane signaling receptor activity
AQ980_24515	COG0501	Belongs to the peptidase M48B family
AQ980_24535	COG0745	RESPONSE REGULATOR receiver
AQ980_24550	COG2207	Transcriptional regulator
AQ980_24550	COG3708	Transcriptional regulator
AQ980_24555	COG1595	DNA-templated transcription, initiation
AQ980_24565	COG1078	dGTPase activity
AQ980_24570	COG1408	metallophosphoesterase
AQ980_24575	COG1073	alpha beta
AQ980_24665	COG4208	sulfate ABC transporter
AQ980_24675	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AQ980_24685	COG0318	PFAM AMP-dependent synthetase and ligase
AQ980_24700	COG0095	Lipoate-protein ligase
AQ980_24705	COG1234	tRNA 3'-trailer cleavage
AQ980_24715	COG1609	Transcriptional regulator
AQ980_24720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_24750	COG1511	domain protein
AQ980_24750	COG1511	domain protein
AQ980_24755	COG1309	transcriptional regulator
AQ980_24805	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AQ980_24810	COG2329	Antibiotic biosynthesis monooxygenase
AQ980_24815	COG3428	Bacterial PH domain
AQ980_24820	COG3402	PFAM membrane-flanked domain
AQ980_24825	COG0697	spore germination
AQ980_24860	COG3428	Bacterial PH domain
AQ980_24865	COG3402	PFAM membrane-flanked domain
AQ980_24875	COG1309	transcriptional regulator
AQ980_24885	COG4473	ABC transporter
AQ980_24890	COG1131	(ABC) transporter
AQ980_24895	COG0537	adenosine 5'-monophosphoramidase activity
AQ980_24900	COG4980	gas vesicle protein
AQ980_24930	COG3973	AAA domain
AQ980_24935	COG0772	Belongs to the SEDS family
AQ980_24945	COG1595	DNA-templated transcription, initiation
AQ980_24960	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AQ980_24970	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AQ980_24975	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
AQ980_24980	COG3620	sequence-specific DNA binding
AQ980_24985	COG2140	Oxalate decarboxylase
AQ980_25010	COG0457	Tetratricopeptide repeat
AQ980_25015	COG0346	lactoylglutathione lyase activity
AQ980_25020	COG0346	lactoylglutathione lyase activity
AQ980_25045	COG4717	serine-type aminopeptidase activity
AQ980_25050	COG0420	3'-5' exonuclease activity
AQ980_25070	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
AQ980_25080	COG2186	Transcriptional regulator
AQ980_25120	COG2205	protein histidine kinase activity
AQ980_25120	COG5002	protein histidine kinase activity
AQ980_25120	COG0784	Response regulator, receiver
AQ980_25125	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AQ980_25130	COG2208	phosphoserine phosphatase activity
AQ980_25140	COG1191	sigma factor activity
AQ980_25210	COG2373	Large extracellular alpha-helical protein
AQ980_25270	COG2376	Dihydroxyacetone kinase
AQ980_25295	COG0640	Transcriptional regulator
AQ980_25300	COG2814	Major facilitator Superfamily
AQ980_25305	COG2801	Transposase and inactivated derivatives
AQ980_25320	COG1183	phosphatidylcholine synthase activity
AQ980_25375	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AQ980_25390	COG1522	sequence-specific DNA binding
AQ980_25395	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AQ980_25425	COG1073	alpha beta
AQ980_25440	COG3344	reverse transcriptase
AQ980_25465	COG2020	methyltransferase activity
AQ980_25510	COG2801	Transposase and inactivated derivatives
AQ980_25525	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AQ980_25540	COG0477	Major facilitator Superfamily
AQ980_25550	COG1842	Phage shock protein A
AQ980_25560	COG1288	antiporter activity
AQ980_25565	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AQ980_25590	COG0305	Participates in initiation and elongation during chromosome replication
AQ980_25605	COG0305	Participates in initiation and elongation during chromosome replication
AQ980_25620	COG0494	nUDIX hydrolase
AQ980_25625	COG3181	Tripartite tricarboxylate transporter family receptor
AQ980_25630	COG4565	transcriptional regulatory protein
AQ980_25635	COG3290	protein histidine kinase activity
AQ980_25640	COG0477	Major facilitator Superfamily
AQ980_25720	COG2801	Transposase and inactivated derivatives
AQ980_25740	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_25755	COG4608	Belongs to the ABC transporter superfamily
AQ980_25760	COG0444	Belongs to the ABC transporter superfamily
AQ980_25765	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AQ980_25770	COG0601	transmembrane transport
AQ980_25810	COG1363	Peptidase, m42
AQ980_25830	COG1024	Enoyl-CoA hydratase
AQ980_25850	COG2244	polysaccharide biosynthetic process
AQ980_25855	COG0659	secondary active sulfate transmembrane transporter activity
AQ980_25870	COG0318	PFAM AMP-dependent synthetase and ligase
AQ980_25875	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AQ980_25880	COG3409	Peptidoglycan-binding domain 1 protein
AQ980_25880	COG5632	N-Acetylmuramoyl-L-alanine amidase
AQ980_25890	COG0561	phosphatase activity
AQ980_25905	COG3527	Alpha-acetolactate decarboxylase
AQ980_25910	COG0028	Belongs to the TPP enzyme family
AQ980_25940	COG0189	ligase activity
AQ980_25955	COG1126	abc transporter atp-binding protein
AQ980_25960	COG0765	amino acid transport
AQ980_25965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AQ980_25970	COG1132	(ABC) transporter
AQ980_25975	COG1132	(ABC) transporter
AQ980_25985	COG1012	belongs to the aldehyde dehydrogenase family
AQ980_26000	COG0531	amino acid
AQ980_26015	COG0693	protein deglycase activity
AQ980_26025	COG2211	Major facilitator Superfamily
AQ980_26030	COG4533	DNA binding
AQ980_26045	COG1733	regulation of RNA biosynthetic process
AQ980_26050	COG2814	Major facilitator Superfamily
AQ980_26055	COG1309	transcriptional regulator
AQ980_26065	COG2076	Multidrug Resistance protein
AQ980_26075	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_26080	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AQ980_26080	COG0165	Argininosuccinate lyase
AQ980_26085	COG1522	sequence-specific DNA binding
AQ980_26105	COG2259	Doxx family
AQ980_26115	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AQ980_26115	COG1263	PTS System
AQ980_26125	COG1737	Transcriptional regulator
AQ980_26135	COG0475	glutathione-regulated potassium exporter activity
AQ980_26140	COG0531	amino acid
AQ980_26175	COG0586	Pfam SNARE associated Golgi protein
AQ980_26210	COG3546	catalase activity
AQ980_26215	COG1114	Component of the transport system for branched-chain amino acids
AQ980_26230	COG5522	Integral membrane protein (intg_mem_TP0381)
AQ980_26240	COG1136	(ABC) transporter
AQ980_26245	COG0577	efflux transmembrane transporter activity
AQ980_26250	COG1388	LysM domain
AQ980_26250	COG3584	3D domain protein
AQ980_26275	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AQ980_26280	COG1447	Phosphotransferase system cellobiose-specific component IIA
AQ980_26285	COG3711	transcriptional antiterminator
AQ980_26285	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AQ980_26300	COG1283	sodium-dependent phosphate transmembrane transporter activity
AQ980_26305	COG0604	alcohol dehydrogenase
AQ980_26310	COG1316	TRANSCRIPTIONal
AQ980_26320	COG0730	response to heat
AQ980_26325	COG2210	Belongs to the sulfur carrier protein TusA family
AQ980_26340	COG0425	Belongs to the sulfur carrier protein TusA family
AQ980_26345	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AQ980_26345	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AQ980_26350	COG0425	Belongs to the sulfur carrier protein TusA family
AQ980_26350	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AQ980_26355	COG1937	Protein conserved in bacteria
AQ980_26360	COG0446	pyridine nucleotide-disulphide oxidoreductase
AQ980_26370	COG3591	Belongs to the peptidase S1B family
AQ980_26380	COG2719	SpoVR family
AQ980_26385	COG0778	Nitroreductase
AQ980_26400	COG2801	Transposase and inactivated derivatives
AQ980_26455	COG1028	Short-chain dehydrogenase reductase Sdr
AQ980_26460	COG2252	PERMEase
AQ980_26470	COG1136	(ABC) transporter
AQ980_26495	COG1846	Transcriptional regulator
AQ980_26500	COG2814	Major facilitator Superfamily
AQ980_26505	COG2205	protein histidine kinase activity
AQ980_26545	COG0351	phosphomethylpyrimidine kinase
AQ980_26550	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AQ980_26560	COG2104	thiamine diphosphate biosynthetic process
AQ980_26565	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AQ980_26570	COG0352	thiamine-phosphate diphosphorylase activity
AQ980_26575	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AQ980_26580	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AQ980_26585	COG1116	anion transmembrane transporter activity
AQ980_26590	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AQ980_26615	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
AQ980_26735	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AQ980_26740	COG0581	inorganic phosphate transmembrane transporter activity
AQ980_26745	COG0573	inorganic phosphate transmembrane transporter activity
AQ980_26750	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AQ980_26755	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
AQ980_26755	COG1918	ferrous iron import across plasma membrane
AQ980_26760	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
AQ980_26765	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
AQ980_26780	COG0531	amino acid
AQ980_26785	COG0697	spore germination
AQ980_26790	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AQ980_26805	COG4990	cell redox homeostasis
AQ980_26810	COG0833	amino acid
AQ980_26820	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AQ980_26825	COG1845	cytochrome c oxidase, subunit III
AQ980_26835	COG0569	domain protein
AQ980_26835	COG0475	glutathione-regulated potassium exporter activity
AQ980_26845	COG2153	protein acetylation
AQ980_26860	COG2252	PERMEase
AQ980_26865	COG1113	amino acid transport
AQ980_26880	COG1114	Component of the transport system for branched-chain amino acids
AQ980_26885	COG3104	oligopeptide transport
AQ980_26905	COG1476	TRANSCRIPTIONal
AQ980_26910	COG3583	domain protein
AQ980_26910	COG3584	3D domain protein
AQ980_26915	COG0840	transmembrane signaling receptor activity
AQ980_26960	COG1674	ftsk spoiiie
AQ980_27050	COG0740	serine-type endopeptidase activity
AQ980_27060	COG4626	Terminase
AQ980_27060	COG1802	Transcriptional regulator
AQ980_27110	COG0582	viral genome integration into host DNA
AQ980_27200	COG1396	sequence-specific DNA binding
AQ980_27230	COG2801	Transposase and inactivated derivatives
AQ980_27240	COG1063	alcohol dehydrogenase
AQ980_27270	COG1879	ABC-type sugar transport system periplasmic component
AQ980_27275	COG1172	Belongs to the binding-protein-dependent transport system permease family
AQ980_27290	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AQ980_27295	COG1609	Transcriptional regulator
AQ980_27300	COG0477	Major facilitator Superfamily
AQ980_27305	COG1846	Transcriptional regulator
AQ980_27310	COG2271	Major facilitator Superfamily
AQ980_27330	COG0659	secondary active sulfate transmembrane transporter activity
AQ980_27345	COG5002	protein histidine kinase activity
AQ980_27350	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AQ980_27355	COG2378	regulation of single-species biofilm formation
AQ980_27365	COG1595	DNA-templated transcription, initiation
AQ980_27380	COG0833	amino acid
AQ980_27385	COG0765	amino acid transport
AQ980_27390	COG0765	amino acid transport
AQ980_27395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AQ980_27400	COG1126	abc transporter atp-binding protein
AQ980_27410	COG1115	amino acid carrier protein
AQ980_27415	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AQ980_27420	COG0697	spore germination
AQ980_27435	COG0366	Alpha amylase catalytic
AQ980_27440	COG1263	PTS System
AQ980_27440	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AQ980_27445	COG2188	Transcriptional regulator
AQ980_27450	COG0531	amino acid
AQ980_27470	COG0714	Associated with various cellular activities
AQ980_27475	COG4548	von Willebrand factor, type A
AQ980_27485	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AQ980_27495	COG2226	methyltransferase
AQ980_27505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_27510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_27515	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AQ980_27520	COG3104	oligopeptide transport
AQ980_27545	COG1620	l-lactate permease
AQ980_27550	COG1027	Aspartate ammonia-lyase
AQ980_27555	COG1253	flavin adenine dinucleotide binding
AQ980_27560	COG0346	lactoylglutathione lyase activity
AQ980_27570	COG3344	reverse transcriptase
AQ980_27585	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AQ980_27590	COG1316	TRANSCRIPTIONal
AQ980_27595	COG2720	vancomycin resistance protein
AQ980_27615	COG3227	Zinc metalloprotease (Elastase)
AQ980_27630	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AQ980_27635	COG2217	Heavy metal translocating P-type atpase
AQ980_27640	COG0640	Transcriptional regulator
AQ980_27650	COG0531	amino acid
AQ980_27665	COG2427	Protein of unknown function (DUF1641)
AQ980_27670	COG3383	formate dehydrogenase (NAD+) activity
AQ980_27675	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AQ980_27680	COG0456	acetyltransferase
AQ980_27680	COG0454	-acetyltransferase
AQ980_27695	COG0745	RESPONSE REGULATOR receiver
AQ980_27700	COG5002	protein histidine kinase activity
AQ980_27710	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AQ980_27715	COG0697	spore germination
AQ980_27725	COG0281	malic enzyme
AQ980_27730	COG3493	citrate carrier protein
AQ980_27735	COG4565	transcriptional regulatory protein
AQ980_27740	COG3290	protein histidine kinase activity
AQ980_27750	COG4990	cell redox homeostasis
AQ980_27760	COG5002	protein histidine kinase activity
AQ980_27765	COG0745	RESPONSE REGULATOR receiver
AQ980_27770	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AQ980_27780	COG0395	ABC-type sugar transport system, permease component
AQ980_27785	COG1175	transmembrane transport
AQ980_27790	COG3842	ATPase activity
AQ980_27795	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
AQ980_27820	COG2851	Citrate transporter
AQ980_27825	COG4565	transcriptional regulatory protein
AQ980_27830	COG3290	protein histidine kinase activity
AQ980_27840	COG2268	Band 7 protein
AQ980_27845	COG1585	Membrane protein implicated in regulation of membrane protease activity
AQ980_27855	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AQ980_27875	COG2766	serine protein kinase
AQ980_27885	COG5001	Diguanylate cyclase
AQ980_27885	COG1716	ATPase activity
AQ980_27890	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AQ980_27915	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AQ980_28035	COG0735	belongs to the Fur family
AQ980_28040	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AQ980_28060	COG4555	ABC transporter
AQ980_28070	COG0067	glutamate synthase
AQ980_28070	COG0069	glutamate synthase activity
AQ980_28070	COG0070	glutamate synthase
AQ980_28075	COG4129	membrane
AQ980_28080	COG1132	(ABC) transporter
AQ980_28105	COG1194	a g-specific adenine glycosylase
AQ980_28110	COG1988	membrane-bound metal-dependent
AQ980_28140	COG1090	epimerase
AQ980_28145	COG1228	amidohydrolase
AQ980_28165	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AQ980_28185	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AQ980_28185	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AQ980_28195	COG0463	Glycosyl transferase, family 2
AQ980_28210	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AQ980_28215	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AQ980_28215	COG1263	PTS System
AQ980_28250	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AQ980_28255	COG0833	amino acid
AQ980_28265	COG3829	transcription factor binding
AQ980_28280	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AQ980_28285	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AQ980_28305	COG0535	radical SAM domain protein
AQ980_28315	COG0387	Pfam Sodium calcium exchanger
AQ980_28320	COG3871	stress protein (general stress protein 26)
AQ980_28335	COG0586	Pfam SNARE associated Golgi protein
AQ980_28360	COG2217	Heavy metal translocating P-type atpase
AQ980_28365	COG1295	ribonuclease BN
AQ980_28375	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AQ980_28390	COG3853	Toxic anion resistance protein (TelA)
AQ980_28400	COG0861	Integral membrane protein TerC family
AQ980_28405	COG2310	stress, protein
AQ980_28410	COG2310	stress, protein
AQ980_28415	COG2310	stress, protein
AQ980_28445	COG2270	Major facilitator Superfamily
AQ980_28490	COG1116	anion transmembrane transporter activity
AQ980_28500	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AQ980_28520	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AQ980_28550	COG1263	PTS System
AQ980_28550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AQ980_28550	COG2190	(PTS) system
AQ980_28555	COG0366	Alpha amylase catalytic
AQ980_28580	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AQ980_28585	COG0549	Belongs to the carbamate kinase family
AQ980_28610	COG0840	transmembrane signaling receptor activity
AQ980_28620	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AQ980_28625	COG0765	amino acid transport
AQ980_28650	COG2814	Major facilitator Superfamily
AQ980_28655	COG3541	Predicted nucleotidyltransferase
AQ980_28675	COG5002	protein histidine kinase activity
AQ980_28700	COG0166	Belongs to the GPI family
AQ980_28725	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AQ980_28730	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_28735	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AQ980_28740	COG0235	Class ii aldolase
AQ980_28750	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
AQ980_28755	COG0450	alkyl hydroperoxide reductase
AQ980_28770	COG1473	amidohydrolase
AQ980_28800	COG4807	Protein conserved in bacteria
AQ980_28805	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AQ980_28830	COG0730	response to heat
AQ980_28915	COG0740	serine-type endopeptidase activity
AQ980_28920	COG3547	Transposase (IS116 IS110 IS902 family)
AQ980_28930	COG1802	Transcriptional regulator
AQ980_28930	COG4626	Terminase
AQ980_28970	COG0582	viral genome integration into host DNA
AQ980_29065	COG2002	toxin-antitoxin pair type II binding
AQ980_29075	COG1484	DNA-dependent DNA replication
AQ980_29120	COG0582	viral genome integration into host DNA
AQ980_29130	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AQ980_29145	COG2309	aminopeptidase activity
AQ980_29155	COG2076	Multidrug Resistance protein
AQ980_29160	COG1012	belongs to the aldehyde dehydrogenase family
AQ980_29170	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AQ980_29180	COG1597	lipid kinase activity
AQ980_29200	COG4682	membrane
AQ980_29205	COG1846	Transcriptional regulator
AQ980_29210	COG0003	Pfam Anion-transporting ATPase
AQ980_29225	COG1464	Belongs to the NlpA lipoprotein family
AQ980_29230	COG2011	ABC-type metal ion transport system permease component
AQ980_29240	COG1335	isochorismatase
AQ980_29255	COG4851	CamS sex pheromone cAM373 precursor
AQ980_29265	COG0210	DNA helicase
AQ980_29295	COG0151	Belongs to the GarS family
AQ980_29305	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AQ980_29315	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AQ980_29330	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AQ980_29340	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AQ980_29345	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AQ980_29350	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AQ980_29375	COG1216	Glycosyl transferase, family 2
AQ980_29375	COG0463	Glycosyl transferase, family 2
AQ980_29385	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AQ980_29435	COG0745	RESPONSE REGULATOR receiver
AQ980_29440	COG2205	protein histidine kinase activity
AQ980_29480	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AQ980_29505	COG5002	protein histidine kinase activity
AQ980_29515	COG2252	PERMEase
AQ980_29525	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AQ980_29550	COG4824	toxin secretion phage lysis holin
AQ980_29815	COG0592	DNA-directed DNA polymerase activity
AQ980_29820	COG4712	double-strand break repair protein
AQ980_29855	COG3344	reverse transcriptase
AQ980_29865	COG3344	reverse transcriptase
AQ980_30090	COG3344	reverse transcriptase
AQ980_30100	COG3344	reverse transcriptase
AQ980_30155	COG2311	Membrane
AQ980_30175	COG0457	Tetratricopeptide repeat
AQ980_30200	COG0583	DNA-binding transcription factor activity
AQ980_30205	COG0655	NAD(P)H dehydrogenase (quinone) activity
AQ980_30250	COG0730	response to heat
AQ980_30275	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AQ980_30305	COG2002	toxin-antitoxin pair type II binding
AQ980_30310	COG4166	transmembrane transport
AQ980_30325	COG4974	Belongs to the 'phage' integrase family
AQ980_30375	COG0653	protein targeting
AQ980_30380	COG0457	Tetratricopeptide repeat
AQ980_30405	COG2072	flavoprotein involved in K transport
AQ980_30415	COG0697	spore germination
AQ980_30425	COG3344	reverse transcriptase
AQ980_30450	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AQ980_30475	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AQ980_30490	COG5632	N-Acetylmuramoyl-L-alanine amidase
AQ980_30490	COG3409	Peptidoglycan-binding domain 1 protein
AQ980_30530	COG0659	secondary active sulfate transmembrane transporter activity
AQ980_30535	COG0589	response to stress
AQ980_30540	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AQ980_30550	COG2323	membrane
AQ980_30555	COG1522	sequence-specific DNA binding
AQ980_30560	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AQ980_30615	COG4824	toxin secretion phage lysis holin
AQ980_30655	COG4974	Belongs to the 'phage' integrase family
AQ980_30675	COG0457	Tetratricopeptide repeat
AQ980_30805	COG0659	secondary active sulfate transmembrane transporter activity
AQ980_30815	COG2323	membrane
AQ980_30820	COG1522	sequence-specific DNA binding
AQ980_30825	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AQ980_30870	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AQ980_30960	COG1923	regulation of RNA biosynthetic process
AQ980_30970	COG0457	Tetratricopeptide repeat
AQ980_31165	COG0741	lytic transglycosylase activity
AQ980_31165	COG0791	NLP P60 protein
AQ980_31175	COG2323	membrane
AQ980_31180	COG1522	sequence-specific DNA binding
AQ980_31185	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AQ980_31365	COG0457	Tetratricopeptide repeat
AQ980_31410	COG0739	heme binding
AQ980_31555	COG0791	NLP P60 protein
AQ980_31555	COG0741	lytic transglycosylase activity
AQ980_31630	COG0659	secondary active sulfate transmembrane transporter activity
AQ980_31700	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AQ980_31700	COG0551	DNA topoisomerase type I activity
AQ980_31730	COG2801	Transposase and inactivated derivatives
AQ980_31755	COG0457	Tetratricopeptide repeat
AQ980_31760	COG4166	transmembrane transport
AQ980_31815	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AQ980_32020	COG3344	reverse transcriptase
AQ980_32070	COG1396	sequence-specific DNA binding
AQ980_32190	COG3331	DNA recombination
AQ980_32245	COG3728	DNA packaging
AQ980_32245	COG5484	DNA packaging
AQ980_32345	COG3409	Peptidoglycan-binding domain 1 protein
AQ980_32345	COG1388	LysM domain
AQ980_32345	COG5632	N-Acetylmuramoyl-L-alanine amidase
AQ980_32385	COG0457	Tetratricopeptide repeat