AQ980_00060 SM00507 HNH nucleases AQ980_00195 SM00530 Helix-turn-helix XRE-family like proteins AQ980_00280 SM00530 Helix-turn-helix XRE-family like proteins AQ980_00295 SM00883 Chaperonin 10 Kd subunit AQ980_00310 SM00881 CoA binding domain AQ980_00315 SM00382 ATPases associated with a variety of cellular activities AQ980_00425 SM00731 SprT homologues. AQ980_00435 SM00316 Ribosomal protein S1-like RNA-binding domain AQ980_00435 SM00732 Likely ribonuclease with RNase H fold. AQ980_00450 SM01005 Alanine racemase, C-terminal domain AQ980_00475 SM00487 DEAD-like helicases superfamily AQ980_00475 SM00490 helicase superfamily c-terminal domain AQ980_00555 SM00382 ATPases associated with a variety of cellular activities AQ980_00560 SM00382 ATPases associated with a variety of cellular activities AQ980_00610 SM00382 ATPases associated with a variety of cellular activities AQ980_00665 SM00354 helix_turn _helix lactose operon repressor AQ980_00675 SM00563 Phosphate acyltransferases AQ980_00765 SM00342 helix_turn_helix, arabinose operon control protein AQ980_00805 SM00829 Enoylreductase AQ980_00815 SM00382 ATPases associated with a variety of cellular activities AQ980_00815 SM00930 AQ980_00815 AQ980_00950 SM01251 AQ980_00950 AQ980_00965 SM00646 AQ980_00965 AQ980_00995 SM00382 ATPases associated with a variety of cellular activities AQ980_01000 SM00382 ATPases associated with a variety of cellular activities AQ980_01010 SM00662 RNA polymerases D AQ980_01030 SM00316 Ribosomal protein S1-like RNA-binding domain AQ980_01090 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AQ980_01095 SM01374 AQ980_01095 AQ980_01115 SM00322 K homology RNA-binding domain AQ980_01130 SM01382 AQ980_01130 AQ980_01130 SM01383 AQ980_01130 AQ980_01150 SM01403 AQ980_01150 AQ980_01160 SM00838 Elongation factor G C-terminus AQ980_01160 SM00889 Elongation factor G, domain IV AQ980_01180 SM00663 RNA polymerase I subunit A N-terminus AQ980_01210 SM00649 Ribosomal protein L11/L12 AQ980_01215 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AQ980_01230 SM00421 helix_turn_helix, Lux Regulon AQ980_01240 SM00967 RNA 2'-O ribose methyltransferase substrate binding AQ980_01245 SM00535 Ribonuclease III family AQ980_01250 SM00840 AQ980_01250 AQ980_01275 SM00670 Large family of predicted nucleotide-binding domains AQ980_01285 SM00382 ATPases associated with a variety of cellular activities AQ980_01290 SM00382 ATPases associated with a variety of cellular activities AQ980_01290 SM01086 C-terminal, D2-small domain, of ClpB protein AQ980_01395 SM00530 Helix-turn-helix XRE-family like proteins AQ980_01405 SM00905 Dihydroneopterin aldolase AQ980_01445 SM00382 ATPases associated with a variety of cellular activities AQ980_01455 SM00977 TilS substrate C-terminal domain AQ980_01460 SM00331 Sigma factor PP2C-like phosphatases AQ980_01460 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AQ980_01475 SM00316 Ribosomal protein S1-like RNA-binding domain AQ980_01495 SM00363 S4 RNA-binding domain AQ980_01510 SM00966 SpoVT / AbrB like domain AQ980_01515 SM00487 DEAD-like helicases superfamily AQ980_01515 SM00490 helicase superfamily c-terminal domain AQ980_01515 SM00982 AQ980_01515 AQ980_01515 SM01058 CarD-like/TRCF domain AQ980_01530 SM01400 AQ980_01530 AQ980_01575 SM00650 Ribosomal RNA adenine dimethylases AQ980_01580 SM00493 AQ980_01580 AQ980_01595 SM00966 SpoVT / AbrB like domain AQ980_01605 SM00465 GIY-YIG type nucleases (URI domain) AQ980_01680 SM00493 AQ980_01680 AQ980_01690 SM00382 ATPases associated with a variety of cellular activities AQ980_01745 SM00936 Penicillin-binding protein 5, C-terminal domain AQ980_01750 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ980_01750 SM01240 AQ980_01750 AQ980_01785 SM00434 DNA Topoisomerase IV AQ980_01790 SM00387 Histidine kinase-like ATPases AQ980_01790 SM00433 TopoisomeraseII AQ980_01805 SM00480 DNA polymerase III beta subunit AQ980_01810 SM00382 ATPases associated with a variety of cellular activities AQ980_01810 SM00760 Bacterial dnaA protein helix-turn-helix domain AQ980_01830 SM00393 Putative single-stranded nucleic acids-binding domain AQ980_01830 SM01245 AQ980_01830 AQ980_01840 SM01228 AQ980_01840 AQ980_01850 SM00470 ParB-like nuclease domain AQ980_01860 SM00470 ParB-like nuclease domain AQ980_01905 SM00267 diguanylate cyclase AQ980_01920 SM00788 Adenylosuccinate synthetase AQ980_01945 SM00448 cheY-homologous receiver domain AQ980_01945 SM00862 Transcriptional regulatory protein, C terminal AQ980_01950 SM00091 PAS domain AQ980_01950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_01950 SM00387 Histidine kinase-like ATPases AQ980_01950 SM00388 His Kinase A (phosphoacceptor) domain AQ980_01965 SM00849 Metallo-beta-lactamase superfamily AQ980_01970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ980_01985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AQ980_01985 SM00387 Histidine kinase-like ATPases AQ980_01985 SM00388 His Kinase A (phosphoacceptor) domain AQ980_02005 SM01240 AQ980_02005 AQ980_02010 SM00487 DEAD-like helicases superfamily AQ980_02085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AQ980_02085 SM00387 Histidine kinase-like ATPases AQ980_02090 SM00448 cheY-homologous receiver domain AQ980_02090 SM00850 LytTr DNA-binding domain AQ980_02125 SM00382 ATPases associated with a variety of cellular activities AQ980_02175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_02205 SM00448 cheY-homologous receiver domain AQ980_02205 SM00850 LytTr DNA-binding domain AQ980_02220 SM00267 diguanylate cyclase AQ980_02230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AQ980_02235 SM00421 helix_turn_helix, Lux Regulon AQ980_02235 SM00448 cheY-homologous receiver domain AQ980_02245 SM00100 Cyclic nucleotide-monophosphate binding domain AQ980_02280 SM00354 helix_turn _helix lactose operon repressor AQ980_02290 SM00382 ATPases associated with a variety of cellular activities AQ980_02300 SM00986 Uracil DNA glycosylase superfamily AQ980_02300 SM00987 UreE urease accessory protein, C-terminal domain AQ980_02345 SM00936 Penicillin-binding protein 5, C-terminal domain AQ980_02385 SM00382 ATPases associated with a variety of cellular activities AQ980_02395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ980_02425 SM00422 helix_turn_helix, mercury resistance AQ980_02470 SM00836 DALR anticodon binding domain AQ980_02470 SM01016 Arginyl tRNA synthetase N terminal dom AQ980_02520 SM00382 ATPases associated with a variety of cellular activities AQ980_02535 SM00421 helix_turn_helix, Lux Regulon AQ980_02535 SM00448 cheY-homologous receiver domain AQ980_02545 SM00530 Helix-turn-helix XRE-family like proteins AQ980_02555 SM00052 Putative diguanylate phosphodiesterase AQ980_02555 SM00267 diguanylate cyclase AQ980_02590 SM00155 Phospholipase D. Active site motifs. AQ980_02640 SM00448 cheY-homologous receiver domain AQ980_02660 SM00357 Cold shock protein domain AQ980_02660 SM00382 ATPases associated with a variety of cellular activities AQ980_02660 SM00959 Rho termination factor, N-terminal domain AQ980_02675 SM00937 AQ980_02675 AQ980_02715 SM00903 Flavin reductase like domain AQ980_02730 SM00226 Low molecular weight phosphatase family AQ980_02800 SM00382 ATPases associated with a variety of cellular activities AQ980_02900 SM00850 LytTr DNA-binding domain AQ980_02905 SM00382 ATPases associated with a variety of cellular activities AQ980_03000 SM00984 UDP binding domain AQ980_03020 SM00448 cheY-homologous receiver domain AQ980_03020 SM00862 Transcriptional regulatory protein, C terminal AQ980_03025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_03025 SM00387 Histidine kinase-like ATPases AQ980_03025 SM00388 His Kinase A (phosphoacceptor) domain AQ980_03050 SM00382 ATPases associated with a variety of cellular activities AQ980_03095 SM00487 DEAD-like helicases superfamily AQ980_03095 SM00490 helicase superfamily c-terminal domain AQ980_03125 SM00287 Bacterial SH3 domain homologues AQ980_03155 SM00287 Bacterial SH3 domain homologues AQ980_03295 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AQ980_03300 SM00382 ATPases associated with a variety of cellular activities AQ980_03315 SM00984 UDP binding domain AQ980_03350 SM00487 DEAD-like helicases superfamily AQ980_03350 SM00490 helicase superfamily c-terminal domain AQ980_03360 SM00357 Cold shock protein domain AQ980_03395 SM00382 ATPases associated with a variety of cellular activities AQ980_03405 SM00957 SecA DEAD-like domain AQ980_03405 SM00958 SecA preprotein cross-linking domain AQ980_03410 SM00937 AQ980_03410 AQ980_03425 SM00382 ATPases associated with a variety of cellular activities AQ980_03435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ980_03435 SM00245 tail specific protease AQ980_03445 SM00382 ATPases associated with a variety of cellular activities AQ980_03455 SM00382 ATPases associated with a variety of cellular activities AQ980_03465 SM00422 helix_turn_helix, mercury resistance AQ980_03480 SM00530 Helix-turn-helix XRE-family like proteins AQ980_03490 SM00422 helix_turn_helix, mercury resistance AQ980_03505 SM00487 DEAD-like helicases superfamily AQ980_03505 SM00490 helicase superfamily c-terminal domain AQ980_03545 SM00028 Tetratricopeptide repeats AQ980_03640 SM00530 Helix-turn-helix XRE-family like proteins AQ980_03645 SM00530 Helix-turn-helix XRE-family like proteins AQ980_03785 SM00507 HNH nucleases AQ980_03885 SM00287 Bacterial SH3 domain homologues AQ980_03885 SM00644 AQ980_03885 AQ980_03890 SM00028 Tetratricopeptide repeats AQ980_03935 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ980_03955 SM01192 AQ980_03955 AQ980_03955 SM01193 AQ980_03955 AQ980_03985 SM00316 Ribosomal protein S1-like RNA-binding domain AQ980_03985 SM00357 Cold shock protein domain AQ980_03985 SM00955 AQ980_03985 AQ980_04025 SM00448 cheY-homologous receiver domain AQ980_04025 SM00862 Transcriptional regulatory protein, C terminal AQ980_04045 SM00382 ATPases associated with a variety of cellular activities AQ980_04080 SM00382 ATPases associated with a variety of cellular activities AQ980_04115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_04120 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AQ980_04130 SM00363 S4 RNA-binding domain AQ980_04165 SM01276 AQ980_04165 AQ980_04275 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_04295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_04295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_04300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_04300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_04325 SM00387 Histidine kinase-like ATPases AQ980_04325 SM00388 His Kinase A (phosphoacceptor) domain AQ980_04330 SM00448 cheY-homologous receiver domain AQ980_04330 SM00862 Transcriptional regulatory protein, C terminal AQ980_04350 SM00530 Helix-turn-helix XRE-family like proteins AQ980_04420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_04420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_04465 SM00849 Metallo-beta-lactamase superfamily AQ980_04515 SM00493 AQ980_04515 AQ980_04530 SM00382 ATPases associated with a variety of cellular activities AQ980_04530 SM00930 AQ980_04530 AQ980_04550 SM00382 ATPases associated with a variety of cellular activities AQ980_04595 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_04605 SM00855 Phosphoglycerate mutase family AQ980_04620 SM00422 helix_turn_helix, mercury resistance AQ980_04745 SM00860 SMI1 / KNR4 family AQ980_04780 SM00382 ATPases associated with a variety of cellular activities AQ980_04850 SM00530 Helix-turn-helix XRE-family like proteins AQ980_04860 SM00530 Helix-turn-helix XRE-family like proteins AQ980_04980 SM00507 HNH nucleases AQ980_05065 SM00644 AQ980_05065 AQ980_05095 SM00530 Helix-turn-helix XRE-family like proteins AQ980_05140 SM00871 Bacterial transcription activator, effector binding domain AQ980_05240 SM00479 AQ980_05240 AQ980_05245 SM01298 AQ980_05245 AQ980_05280 SM00344 helix_turn_helix ASNC type AQ980_05290 SM00316 Ribosomal protein S1-like RNA-binding domain AQ980_05465 SM00642 Alpha-amylase domain AQ980_05515 SM00357 Cold shock protein domain AQ980_05555 SM00857 Resolvase, N terminal domain AQ980_05565 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AQ980_05570 SM00448 cheY-homologous receiver domain AQ980_05570 SM00862 Transcriptional regulatory protein, C terminal AQ980_05575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_05575 SM00387 Histidine kinase-like ATPases AQ980_05575 SM00388 His Kinase A (phosphoacceptor) domain AQ980_05605 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_05605 SM00866 AQ980_05605 AQ980_05645 SM00382 ATPases associated with a variety of cellular activities AQ980_05660 SM00387 Histidine kinase-like ATPases AQ980_05665 SM00448 cheY-homologous receiver domain AQ980_05665 SM00862 Transcriptional regulatory protein, C terminal AQ980_05670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_05685 SM00342 helix_turn_helix, arabinose operon control protein AQ980_05685 SM00871 Bacterial transcription activator, effector binding domain AQ980_05690 SM00382 ATPases associated with a variety of cellular activities AQ980_05730 SM00046 Diacylglycerol kinase catalytic domain (presumed) AQ980_05760 SM00448 cheY-homologous receiver domain AQ980_05760 SM00862 Transcriptional regulatory protein, C terminal AQ980_05765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_05765 SM00387 Histidine kinase-like ATPases AQ980_05765 SM00388 His Kinase A (phosphoacceptor) domain AQ980_05775 SM00899 AQ980_05775 AQ980_05845 SM00947 Carbonic anhydrase AQ980_05850 SM01234 AQ980_05850 AQ980_05910 SM00382 ATPases associated with a variety of cellular activities AQ980_05950 SM00387 Histidine kinase-like ATPases AQ980_05950 SM00388 His Kinase A (phosphoacceptor) domain AQ980_05955 SM00387 Histidine kinase-like ATPases AQ980_05965 SM00420 helix_turn_helix, Deoxyribose operon repressor AQ980_05965 SM01134 AQ980_05965 AQ980_06030 SM00852 Probable molybdopterin binding domain AQ980_06045 SM00014 Acid phosphatase homologues AQ980_06085 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_06105 SM00382 ATPases associated with a variety of cellular activities AQ980_06185 SM00450 Rhodanese Homology Domain AQ980_06205 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_06220 SM00852 Probable molybdopterin binding domain AQ980_06255 SM01058 CarD-like/TRCF domain AQ980_06285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_06305 SM00363 S4 RNA-binding domain AQ980_06310 SM00420 helix_turn_helix, Deoxyribose operon repressor AQ980_06325 SM00642 Alpha-amylase domain AQ980_06345 SM00849 Metallo-beta-lactamase superfamily AQ980_06385 SM00646 AQ980_06385 AQ980_06390 SM00382 ATPases associated with a variety of cellular activities AQ980_06390 SM00843 AQ980_06390 AQ980_06440 SM00830 Chorismate mutase type II AQ980_06450 SM00354 helix_turn _helix lactose operon repressor AQ980_06485 SM00448 cheY-homologous receiver domain AQ980_06485 SM00862 Transcriptional regulatory protein, C terminal AQ980_06485 SM01043 Bacterial transcriptional activator domain AQ980_06490 SM00327 von Willebrand factor (vWF) type A domain AQ980_06505 SM00387 Histidine kinase-like ATPases AQ980_06505 SM00388 His Kinase A (phosphoacceptor) domain AQ980_06505 SM00448 cheY-homologous receiver domain AQ980_06510 SM00248 ankyrin repeats AQ980_06515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_06515 SM00387 Histidine kinase-like ATPases AQ980_06515 SM00388 His Kinase A (phosphoacceptor) domain AQ980_06520 SM00448 cheY-homologous receiver domain AQ980_06520 SM00862 Transcriptional regulatory protein, C terminal AQ980_06540 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ980_06555 SM01266 AQ980_06555 AQ980_06575 SM00363 S4 RNA-binding domain AQ980_06600 SM00363 S4 RNA-binding domain AQ980_06600 SM01390 AQ980_06600 AQ980_06640 SM00981 AQ980_06640 AQ980_06765 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AQ980_06765 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AQ980_06815 SM00849 Metallo-beta-lactamase superfamily AQ980_06825 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ980_06855 SM00481 DNA polymerase alpha chain like domain AQ980_06860 SM00919 Malic enzyme, NAD binding domain AQ980_06860 SM01274 AQ980_06860 AQ980_06865 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_06915 SM01329 AQ980_06915 AQ980_06935 SM00448 cheY-homologous receiver domain AQ980_06935 SM00862 Transcriptional regulatory protein, C terminal AQ980_06940 SM00091 PAS domain AQ980_06940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_06940 SM00387 Histidine kinase-like ATPases AQ980_06940 SM00388 His Kinase A (phosphoacceptor) domain AQ980_06945 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AQ980_06945 SM00474 3'-5' exonuclease AQ980_06945 SM00475 5'-3' exonuclease AQ980_06945 SM00482 DNA polymerase A domain AQ980_06950 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AQ980_06950 SM01232 AQ980_06950 AQ980_06965 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ980_06985 SM00382 ATPases associated with a variety of cellular activities AQ980_07000 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_07070 SM00967 RNA 2'-O ribose methyltransferase substrate binding AQ980_07080 SM00873 B3/4 domain AQ980_07080 SM00874 tRNA synthetase B5 domain AQ980_07080 SM00896 Ferredoxin-fold anticodon binding domain AQ980_07120 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AQ980_07120 SM00481 DNA polymerase alpha chain like domain AQ980_07120 SM00483 DNA polymerase X family AQ980_07125 SM00463 Small MutS-related domain AQ980_07125 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AQ980_07125 SM00534 ATPase domain of DNA mismatch repair MUTS family AQ980_07135 SM00363 S4 RNA-binding domain AQ980_07145 SM00725 NEAr Transporter domain AQ980_07150 SM00725 NEAr Transporter domain AQ980_07155 SM00725 NEAr Transporter domain AQ980_07170 SM00382 ATPases associated with a variety of cellular activities AQ980_07185 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AQ980_07200 SM00448 cheY-homologous receiver domain AQ980_07200 SM00862 Transcriptional regulatory protein, C terminal AQ980_07205 SM00387 Histidine kinase-like ATPases AQ980_07205 SM00388 His Kinase A (phosphoacceptor) domain AQ980_07210 SM00382 ATPases associated with a variety of cellular activities AQ980_07280 SM00893 Electron transfer flavoprotein domain AQ980_07285 SM00893 Electron transfer flavoprotein domain AQ980_07295 SM00465 GIY-YIG type nucleases (URI domain) AQ980_07345 SM00382 ATPases associated with a variety of cellular activities AQ980_07370 SM00530 Helix-turn-helix XRE-family like proteins AQ980_07390 SM00421 helix_turn_helix, Lux Regulon AQ980_07410 SM00909 Sporulation and spore germination AQ980_07465 SM00382 ATPases associated with a variety of cellular activities AQ980_07465 SM00994 ClpX C4-type zinc finger AQ980_07465 SM01086 C-terminal, D2-small domain, of ClpB protein AQ980_07470 SM00382 ATPases associated with a variety of cellular activities AQ980_07475 SM00382 ATPases associated with a variety of cellular activities AQ980_07475 SM00464 Found in ATP-dependent protease La (LON) AQ980_07490 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_07515 SM01004 Delta-aminolevulinic acid dehydratase AQ980_07525 SM00257 Lysin motif AQ980_07615 SM01317 AQ980_07615 AQ980_07625 SM00448 cheY-homologous receiver domain AQ980_07625 SM00862 Transcriptional regulatory protein, C terminal AQ980_07630 SM00387 Histidine kinase-like ATPases AQ980_07635 SM00382 ATPases associated with a variety of cellular activities AQ980_07685 SM00257 Lysin motif AQ980_07710 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AQ980_07715 SM00382 ATPases associated with a variety of cellular activities AQ980_07735 SM01323 AQ980_07735 AQ980_07780 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ980_07780 SM00954 Region found in RelA / SpoT proteins AQ980_07820 SM00382 ATPases associated with a variety of cellular activities AQ980_07840 SM00028 Tetratricopeptide repeats AQ980_07875 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_07885 SM00732 Likely ribonuclease with RNase H fold. AQ980_07985 SM00382 ATPases associated with a variety of cellular activities AQ980_08010 SM00530 Helix-turn-helix XRE-family like proteins AQ980_08055 SM00382 ATPases associated with a variety of cellular activities AQ980_08065 SM00855 Phosphoglycerate mutase family AQ980_08090 SM00098 Alkaline phosphatase homologues AQ980_08100 SM00954 Region found in RelA / SpoT proteins AQ980_08155 SM01103 AQ980_08155 AQ980_08165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ980_08185 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AQ980_08195 SM00849 Metallo-beta-lactamase superfamily AQ980_08225 SM00838 Elongation factor G C-terminus AQ980_08235 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_08255 SM00271 DnaJ molecular chaperone homology domain AQ980_08270 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_08300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ980_08335 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ980_08350 SM00400 zinc finger AQ980_08350 SM00493 AQ980_08350 AQ980_08350 SM00766 DNA primase DnaG DnaB-binding AQ980_08385 SM00487 DEAD-like helicases superfamily AQ980_08385 SM00490 helicase superfamily c-terminal domain AQ980_08390 SM00518 AP endonuclease family 2 AQ980_08405 SM00382 ATPases associated with a variety of cellular activities AQ980_08470 SM00382 ATPases associated with a variety of cellular activities AQ980_08510 SM00849 Metallo-beta-lactamase superfamily AQ980_08520 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_08550 SM01018 B12 binding domain AQ980_08605 SM00382 ATPases associated with a variety of cellular activities AQ980_08640 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AQ980_08675 SM00487 DEAD-like helicases superfamily AQ980_08675 SM00490 helicase superfamily c-terminal domain AQ980_08705 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_08710 SM00382 ATPases associated with a variety of cellular activities AQ980_08760 SM00354 helix_turn _helix lactose operon repressor AQ980_08770 SM00450 Rhodanese Homology Domain AQ980_08800 SM00529 Helix-turn-helix diphteria tox regulatory element AQ980_08835 SM00841 Elongation factor P, C-terminal AQ980_08835 SM01185 AQ980_08835 AQ980_08855 SM00382 ATPases associated with a variety of cellular activities AQ980_08905 SM00878 Biotin carboxylase C-terminal domain AQ980_08940 SM00861 Transketolase, pyrimidine binding domain AQ980_08945 SM00363 S4 RNA-binding domain AQ980_08960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ980_08970 SM00448 cheY-homologous receiver domain AQ980_08995 SM00091 PAS domain AQ980_08995 SM00382 ATPases associated with a variety of cellular activities AQ980_09010 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ980_09030 SM00861 Transketolase, pyrimidine binding domain AQ980_09070 SM00062 Bacterial periplasmic substrate-binding proteins AQ980_09070 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AQ980_09080 SM00382 ATPases associated with a variety of cellular activities AQ980_09125 SM00831 Cation transporter/ATPase, N-terminus AQ980_09145 SM00849 Metallo-beta-lactamase superfamily AQ980_09170 SM00849 Metallo-beta-lactamase superfamily AQ980_09185 SM00859 Semialdehyde dehydrogenase, NAD binding domain AQ980_09220 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_09270 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_09270 SM00876 Biotin and Thiamin Synthesis associated domain AQ980_09300 SM00704 CDGSH-type zinc finger. Function unknown. AQ980_09320 SM00354 helix_turn _helix lactose operon repressor AQ980_09415 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AQ980_09435 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_09450 SM00382 ATPases associated with a variety of cellular activities AQ980_09455 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_09460 SM00936 Penicillin-binding protein 5, C-terminal domain AQ980_09470 SM00387 Histidine kinase-like ATPases AQ980_09570 SM00849 Metallo-beta-lactamase superfamily AQ980_09585 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_09585 SM00866 AQ980_09585 AQ980_09595 SM01061 CAT RNA binding domain AQ980_09630 SM00267 diguanylate cyclase AQ980_09660 SM01007 Class II Aldolase and Adducin N-terminal domain AQ980_09710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_09720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_09805 SM00382 ATPases associated with a variety of cellular activities AQ980_09835 SM00382 ATPases associated with a variety of cellular activities AQ980_09840 SM00642 Alpha-amylase domain AQ980_09845 SM00642 Alpha-amylase domain AQ980_09865 SM00354 helix_turn _helix lactose operon repressor AQ980_09880 SM00387 Histidine kinase-like ATPases AQ980_09880 SM00388 His Kinase A (phosphoacceptor) domain AQ980_09970 SM00052 Putative diguanylate phosphodiesterase AQ980_10035 SM00849 Metallo-beta-lactamase superfamily AQ980_10065 SM00861 Transketolase, pyrimidine binding domain AQ980_10140 SM00838 Elongation factor G C-terminus AQ980_10165 SM00670 Large family of predicted nucleotide-binding domains AQ980_10185 SM00878 Biotin carboxylase C-terminal domain AQ980_10250 SM00855 Phosphoglycerate mutase family AQ980_10290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ980_10310 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AQ980_10340 SM00740 AQ980_10340 AQ980_10345 SM00740 AQ980_10345 AQ980_10385 SM00842 Cell division protein FtsA AQ980_10390 SM00864 Tubulin/FtsZ family, GTPase domain AQ980_10390 SM00865 Tubulin/FtsZ family, C-terminal domain AQ980_10435 SM00363 S4 RNA-binding domain AQ980_10460 SM00363 S4 RNA-binding domain AQ980_10485 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AQ980_10490 SM00851 MGS-like domain AQ980_10490 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AQ980_10490 SM01209 AQ980_10490 AQ980_10505 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AQ980_10545 SM00831 Cation transporter/ATPase, N-terminus AQ980_10560 SM00072 Guanylate kinase homologues. AQ980_10565 SM01409 AQ980_10565 AQ980_10575 SM00487 DEAD-like helicases superfamily AQ980_10575 SM00490 helicase superfamily c-terminal domain AQ980_10600 SM00331 Sigma factor PP2C-like phosphatases AQ980_10600 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AQ980_10605 SM00220 Serine/Threonine protein kinases, catalytic domain AQ980_10605 SM00740 AQ980_10605 AQ980_10620 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AQ980_10640 SM01120 AQ980_10640 AQ980_10640 SM01121 AQ980_10640 AQ980_10645 SM00487 DEAD-like helicases superfamily AQ980_10645 SM00490 helicase superfamily c-terminal domain AQ980_10660 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AQ980_10665 SM00822 AQ980_10665 AQ980_10675 SM00358 Double-stranded RNA binding motif AQ980_10675 SM00535 Ribonuclease III family AQ980_10685 SM00507 HNH nucleases AQ980_10690 SM00968 SMC proteins Flexible Hinge Domain AQ980_10695 SM00382 ATPases associated with a variety of cellular activities AQ980_10695 SM00962 SRP54-type protein, GTPase domain AQ980_10695 SM00963 SRP54-type protein, helical bundle domain AQ980_10705 SM00382 ATPases associated with a variety of cellular activities AQ980_10705 SM00962 SRP54-type protein, GTPase domain AQ980_10705 SM00963 SRP54-type protein, helical bundle domain AQ980_10755 SM00881 CoA binding domain AQ980_10765 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AQ980_10765 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AQ980_10765 SM00493 AQ980_10765 AQ980_10785 SM00382 ATPases associated with a variety of cellular activities AQ980_10785 SM01086 C-terminal, D2-small domain, of ClpB protein AQ980_10830 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ980_10840 SM00479 AQ980_10840 AQ980_10840 SM00481 DNA polymerase alpha chain like domain AQ980_10850 SM00316 Ribosomal protein S1-like RNA-binding domain AQ980_10850 SM00322 K homology RNA-binding domain AQ980_10885 SM00904 Riboflavin kinase AQ980_10890 SM01387 AQ980_10890 AQ980_10895 SM00316 Ribosomal protein S1-like RNA-binding domain AQ980_10895 SM00322 K homology RNA-binding domain AQ980_10925 SM00859 Semialdehyde dehydrogenase, NAD binding domain AQ980_10935 SM01130 AQ980_10935 AQ980_10945 SM00849 Metallo-beta-lactamase superfamily AQ980_10960 SM00382 ATPases associated with a variety of cellular activities AQ980_10960 SM00843 AQ980_10960 AQ980_10965 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_10965 SM00866 AQ980_10965 AQ980_10975 SM00382 ATPases associated with a variety of cellular activities AQ980_11025 SM00852 Probable molybdopterin binding domain AQ980_11030 SM00382 ATPases associated with a variety of cellular activities AQ980_11035 SM00322 K homology RNA-binding domain AQ980_11035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ980_11065 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_11080 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AQ980_11080 SM00534 ATPase domain of DNA mismatch repair MUTS family AQ980_11085 SM00853 MutL C terminal dimerisation domain AQ980_11085 SM01340 AQ980_11085 AQ980_11110 SM00257 Lysin motif AQ980_11120 SM00148 Phospholipase C, catalytic domain (part); domain X AQ980_11130 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_11130 SM00866 AQ980_11130 AQ980_11140 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_11190 SM00052 Putative diguanylate phosphodiesterase AQ980_11190 SM00091 PAS domain AQ980_11190 SM00267 diguanylate cyclase AQ980_11215 SM00478 endonuclease III AQ980_11225 SM00342 helix_turn_helix, arabinose operon control protein AQ980_11245 SM00382 ATPases associated with a variety of cellular activities AQ980_11280 SM00411 bacterial (prokaryotic) histone like domain AQ980_11295 SM00636 AQ980_11295 AQ980_11325 SM00420 helix_turn_helix, Deoxyribose operon repressor AQ980_11325 SM01134 AQ980_11325 AQ980_11340 SM00287 Bacterial SH3 domain homologues AQ980_11370 SM00382 ATPases associated with a variety of cellular activities AQ980_11395 SM00422 helix_turn_helix, mercury resistance AQ980_11400 SM01230 AQ980_11400 AQ980_11425 SM00857 Resolvase, N terminal domain AQ980_11450 SM00062 Bacterial periplasmic substrate-binding proteins AQ980_11455 SM00382 ATPases associated with a variety of cellular activities AQ980_11470 SM00861 Transketolase, pyrimidine binding domain AQ980_11485 SM00382 ATPases associated with a variety of cellular activities AQ980_11490 SM00382 ATPases associated with a variety of cellular activities AQ980_11495 SM00287 Bacterial SH3 domain homologues AQ980_11495 SM00641 Glycosyl hydrolases family 25 AQ980_11650 SM01058 CarD-like/TRCF domain AQ980_11660 SM00507 HNH nucleases AQ980_11695 SM00091 PAS domain AQ980_11695 SM00387 Histidine kinase-like ATPases AQ980_11695 SM00388 His Kinase A (phosphoacceptor) domain AQ980_11710 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AQ980_11715 SM00644 AQ980_11715 AQ980_11715 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AQ980_11740 SM00988 UreE urease accessory protein, N-terminal domain AQ980_11790 SM00530 Helix-turn-helix XRE-family like proteins AQ980_11825 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_11870 SM00382 ATPases associated with a variety of cellular activities AQ980_11890 SM00479 AQ980_11890 AQ980_11910 SM00257 Lysin motif AQ980_11910 SM00636 AQ980_11910 AQ980_11930 SM01207 AQ980_11930 AQ980_11945 SM00448 cheY-homologous receiver domain AQ980_11945 SM00862 Transcriptional regulatory protein, C terminal AQ980_11950 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ980_11955 SM00881 CoA binding domain AQ980_11965 SM00387 Histidine kinase-like ATPases AQ980_11965 SM00433 TopoisomeraseII AQ980_11970 SM00434 DNA Topoisomerase IV AQ980_11995 SM00382 ATPases associated with a variety of cellular activities AQ980_12095 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AQ980_12095 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AQ980_12115 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_12130 SM00852 Probable molybdopterin binding domain AQ980_12185 SM00822 AQ980_12185 AQ980_12240 SM01022 AQ980_12240 AQ980_12270 SM00357 Cold shock protein domain AQ980_12275 SM00479 AQ980_12275 AQ980_12320 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AQ980_12325 SM00387 Histidine kinase-like ATPases AQ980_12325 SM00388 His Kinase A (phosphoacceptor) domain AQ980_12350 SM00382 ATPases associated with a variety of cellular activities AQ980_12380 SM00060 Fibronectin type 3 domain AQ980_12380 SM00495 Chitin-binding domain type 3 AQ980_12380 SM01276 AQ980_12380 AQ980_12415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_12415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_12415 SM00319 Homologues of the ligand binding domain of Tar AQ980_12425 SM00028 Tetratricopeptide repeats AQ980_12450 SM00382 ATPases associated with a variety of cellular activities AQ980_12510 SM00060 Fibronectin type 3 domain AQ980_12510 SM00495 Chitin-binding domain type 3 AQ980_12515 SM00148 Phospholipase C, catalytic domain (part); domain X AQ980_12530 SM00450 Rhodanese Homology Domain AQ980_12530 SM00849 Metallo-beta-lactamase superfamily AQ980_12580 SM00028 Tetratricopeptide repeats AQ980_12595 SM00829 Enoylreductase AQ980_12600 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_12660 SM00422 helix_turn_helix, mercury resistance AQ980_12660 SM00871 Bacterial transcription activator, effector binding domain AQ980_12680 SM00642 Alpha-amylase domain AQ980_12685 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AQ980_12685 SM00534 ATPase domain of DNA mismatch repair MUTS family AQ980_12695 SM00855 Phosphoglycerate mutase family AQ980_12705 SM00829 Enoylreductase AQ980_12820 SM00849 Metallo-beta-lactamase superfamily AQ980_12865 SM00849 Metallo-beta-lactamase superfamily AQ980_12895 SM00382 ATPases associated with a variety of cellular activities AQ980_12910 SM00871 Bacterial transcription activator, effector binding domain AQ980_12935 SM00636 AQ980_12935 AQ980_12940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_13000 SM00849 Metallo-beta-lactamase superfamily AQ980_13025 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_13025 SM00866 AQ980_13025 AQ980_13045 SM00914 AQ980_13045 AQ980_13085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_13085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_13090 SM01276 AQ980_13090 AQ980_13100 SM00829 Enoylreductase AQ980_13120 SM00861 Transketolase, pyrimidine binding domain AQ980_13125 SM01350 AQ980_13125 AQ980_13205 SM00422 helix_turn_helix, mercury resistance AQ980_13210 SM01091 Transporter associated domain AQ980_13235 SM00028 Tetratricopeptide repeats AQ980_13330 SM00530 Helix-turn-helix XRE-family like proteins AQ980_13345 SM00382 ATPases associated with a variety of cellular activities AQ980_13440 SM00382 ATPases associated with a variety of cellular activities AQ980_13500 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_13525 SM00854 Bacterial capsule synthesis protein PGA_cap AQ980_13595 SM00860 SMI1 / KNR4 family AQ980_13635 SM00382 ATPases associated with a variety of cellular activities AQ980_13655 SM00047 Lysozyme subfamily 2 AQ980_13660 SM00530 Helix-turn-helix XRE-family like proteins AQ980_13790 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ980_13790 SM00924 MgtE intracellular N domain AQ980_13850 SM00382 ATPases associated with a variety of cellular activities AQ980_13880 SM00878 Biotin carboxylase C-terminal domain AQ980_13965 SM00387 Histidine kinase-like ATPases AQ980_13965 SM00388 His Kinase A (phosphoacceptor) domain AQ980_13975 SM00448 cheY-homologous receiver domain AQ980_13975 SM00862 Transcriptional regulatory protein, C terminal AQ980_14010 SM00342 helix_turn_helix, arabinose operon control protein AQ980_14040 SM00382 ATPases associated with a variety of cellular activities AQ980_14050 SM00422 helix_turn_helix, mercury resistance AQ980_14050 SM00871 Bacterial transcription activator, effector binding domain AQ980_14080 SM00382 ATPases associated with a variety of cellular activities AQ980_14110 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_14200 SM00448 cheY-homologous receiver domain AQ980_14200 SM00862 Transcriptional regulatory protein, C terminal AQ980_14210 SM00507 HNH nucleases AQ980_14220 SM00382 ATPases associated with a variety of cellular activities AQ980_14230 SM00382 ATPases associated with a variety of cellular activities AQ980_14260 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_14265 SM01209 AQ980_14265 AQ980_14370 SM00091 PAS domain AQ980_14370 SM00387 Histidine kinase-like ATPases AQ980_14370 SM00388 His Kinase A (phosphoacceptor) domain AQ980_14400 SM00382 ATPases associated with a variety of cellular activities AQ980_14410 SM00387 Histidine kinase-like ATPases AQ980_14410 SM00388 His Kinase A (phosphoacceptor) domain AQ980_14475 SM00448 cheY-homologous receiver domain AQ980_14475 SM00862 Transcriptional regulatory protein, C terminal AQ980_14480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_14480 SM00387 Histidine kinase-like ATPases AQ980_14480 SM00388 His Kinase A (phosphoacceptor) domain AQ980_14485 SM00829 Enoylreductase AQ980_14490 SM00014 Acid phosphatase homologues AQ980_14495 SM00740 AQ980_14495 AQ980_14535 SM00422 helix_turn_helix, mercury resistance AQ980_14580 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_14645 SM00480 DNA polymerase III beta subunit AQ980_14735 SM00465 GIY-YIG type nucleases (URI domain) AQ980_14785 SM00448 cheY-homologous receiver domain AQ980_14785 SM00862 Transcriptional regulatory protein, C terminal AQ980_14790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_14790 SM00387 Histidine kinase-like ATPases AQ980_14790 SM00388 His Kinase A (phosphoacceptor) domain AQ980_14805 SM00382 ATPases associated with a variety of cellular activities AQ980_14840 SM00857 Resolvase, N terminal domain AQ980_14845 SM00382 ATPases associated with a variety of cellular activities AQ980_14870 SM00642 Alpha-amylase domain AQ980_14890 SM00871 Bacterial transcription activator, effector binding domain AQ980_14905 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_15030 SM00382 ATPases associated with a variety of cellular activities AQ980_15085 SM00861 Transketolase, pyrimidine binding domain AQ980_15105 SM00342 helix_turn_helix, arabinose operon control protein AQ980_15185 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ980_15185 SM00382 ATPases associated with a variety of cellular activities AQ980_15220 SM00060 Fibronectin type 3 domain AQ980_15220 SM00495 Chitin-binding domain type 3 AQ980_15320 SM00341 Helicase and RNase D C-terminal AQ980_15320 SM00487 DEAD-like helicases superfamily AQ980_15320 SM00490 helicase superfamily c-terminal domain AQ980_15320 SM00956 AQ980_15320 AQ980_15375 SM00646 AQ980_15375 AQ980_15390 SM01131 AQ980_15390 AQ980_15405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ980_15430 SM01130 AQ980_15430 AQ980_15450 SM00091 PAS domain AQ980_15450 SM00382 ATPases associated with a variety of cellular activities AQ980_15515 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AQ980_15540 SM00248 ankyrin repeats AQ980_15565 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AQ980_15575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_15575 SM00387 Histidine kinase-like ATPases AQ980_15575 SM00388 His Kinase A (phosphoacceptor) domain AQ980_15580 SM00448 cheY-homologous receiver domain AQ980_15580 SM00862 Transcriptional regulatory protein, C terminal AQ980_15780 SM00382 ATPases associated with a variety of cellular activities AQ980_15785 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_15860 SM00062 Bacterial periplasmic substrate-binding proteins AQ980_15865 SM00382 ATPases associated with a variety of cellular activities AQ980_15880 SM00028 Tetratricopeptide repeats AQ980_15955 SM00382 ATPases associated with a variety of cellular activities AQ980_16005 SM00830 Chorismate mutase type II AQ980_16045 SM00287 Bacterial SH3 domain homologues AQ980_16090 SM00382 ATPases associated with a variety of cellular activities AQ980_16110 SM01133 AQ980_16110 AQ980_16135 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_16165 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AQ980_16180 SM00346 helix_turn_helix isocitrate lyase regulation AQ980_16210 SM00098 Alkaline phosphatase homologues AQ980_16220 SM00530 Helix-turn-helix XRE-family like proteins AQ980_16265 SM00382 ATPases associated with a variety of cellular activities AQ980_16350 SM01060 AQ980_16350 AQ980_16475 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_16480 SM00889 Elongation factor G, domain IV AQ980_16495 SM00773 Proposed nucleic acid binding domain AQ980_16500 SM00860 SMI1 / KNR4 family AQ980_16515 SM00342 helix_turn_helix, arabinose operon control protein AQ980_16515 SM00871 Bacterial transcription activator, effector binding domain AQ980_16545 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_16675 SM00797 Allophanate hydrolase subunit 2 AQ980_16680 SM00796 Allophanate hydrolase subunit 1 AQ980_16685 SM00346 helix_turn_helix isocitrate lyase regulation AQ980_16700 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_16790 SM00344 helix_turn_helix ASNC type AQ980_16800 SM00849 Metallo-beta-lactamase superfamily AQ980_16825 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ980_16825 SM00091 PAS domain AQ980_16825 SM00387 Histidine kinase-like ATPases AQ980_16825 SM00388 His Kinase A (phosphoacceptor) domain AQ980_16850 SM00342 helix_turn_helix, arabinose operon control protein AQ980_16915 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AQ980_16990 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_17055 SM00226 Low molecular weight phosphatase family AQ980_17070 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_17095 SM00344 helix_turn_helix ASNC type AQ980_17150 SM00421 helix_turn_helix, Lux Regulon AQ980_17150 SM00448 cheY-homologous receiver domain AQ980_17235 SM00382 ATPases associated with a variety of cellular activities AQ980_17245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_17245 SM00387 Histidine kinase-like ATPases AQ980_17245 SM00388 His Kinase A (phosphoacceptor) domain AQ980_17250 SM00448 cheY-homologous receiver domain AQ980_17250 SM00862 Transcriptional regulatory protein, C terminal AQ980_17325 SM00644 AQ980_17325 AQ980_17345 SM00382 ATPases associated with a variety of cellular activities AQ980_17375 SM00710 Parallel beta-helix repeats AQ980_17385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_17395 SM00831 Cation transporter/ATPase, N-terminus AQ980_17400 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ980_17400 SM00924 MgtE intracellular N domain AQ980_17410 SM00507 HNH nucleases AQ980_17460 SM00823 Phosphopantetheine attachment site AQ980_17465 SM00823 Phosphopantetheine attachment site AQ980_17485 SM00936 Penicillin-binding protein 5, C-terminal domain AQ980_17515 SM00966 SpoVT / AbrB like domain AQ980_17520 SM00530 Helix-turn-helix XRE-family like proteins AQ980_17525 SM00421 helix_turn_helix, Lux Regulon AQ980_17565 SM00855 Phosphoglycerate mutase family AQ980_17570 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_17615 SM00487 DEAD-like helicases superfamily AQ980_17615 SM00490 helicase superfamily c-terminal domain AQ980_17625 SM00849 Metallo-beta-lactamase superfamily AQ980_17645 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_17660 SM01207 AQ980_17660 AQ980_17730 SM00835 Cupin AQ980_17755 SM00530 Helix-turn-helix XRE-family like proteins AQ980_17785 SM00382 ATPases associated with a variety of cellular activities AQ980_17790 SM00382 ATPases associated with a variety of cellular activities AQ980_17830 SM00859 Semialdehyde dehydrogenase, NAD binding domain AQ980_17855 SM00357 Cold shock protein domain AQ980_17890 SM00530 Helix-turn-helix XRE-family like proteins AQ980_17915 SM01059 Chloramphenicol acetyltransferase AQ980_17935 SM00849 Metallo-beta-lactamase superfamily AQ980_17945 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_17960 SM00100 Cyclic nucleotide-monophosphate binding domain AQ980_17985 SM00860 SMI1 / KNR4 family AQ980_17990 SM00849 Metallo-beta-lactamase superfamily AQ980_18010 SM00382 ATPases associated with a variety of cellular activities AQ980_18015 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_18020 SM00363 S4 RNA-binding domain AQ980_18060 SM00411 bacterial (prokaryotic) histone like domain AQ980_18080 SM00923 MbtH-like protein AQ980_18085 SM00823 Phosphopantetheine attachment site AQ980_18085 SM00824 Thioesterase AQ980_18105 SM00822 AQ980_18105 AQ980_18125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_18255 SM00382 ATPases associated with a variety of cellular activities AQ980_18320 SM00014 Acid phosphatase homologues AQ980_18330 SM00219 Tyrosine kinase, catalytic domain AQ980_18370 SM00382 ATPases associated with a variety of cellular activities AQ980_18385 SM00882 Coenzyme A transferase AQ980_18390 SM00882 Coenzyme A transferase AQ980_18405 SM00387 Histidine kinase-like ATPases AQ980_18405 SM00388 His Kinase A (phosphoacceptor) domain AQ980_18420 SM01091 Transporter associated domain AQ980_18460 SM00382 ATPases associated with a variety of cellular activities AQ980_18495 SM01350 AQ980_18495 AQ980_18520 SM00829 Enoylreductase AQ980_18535 SM00421 helix_turn_helix, Lux Regulon AQ980_18535 SM00448 cheY-homologous receiver domain AQ980_18540 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AQ980_18645 SM00563 Phosphate acyltransferases AQ980_18700 SM00382 ATPases associated with a variety of cellular activities AQ980_18715 SM00530 Helix-turn-helix XRE-family like proteins AQ980_18815 SM00028 Tetratricopeptide repeats AQ980_18835 SM00836 DALR anticodon binding domain AQ980_18835 SM01016 Arginyl tRNA synthetase N terminal dom AQ980_18855 SM00567 E-Z type HEAT repeats AQ980_18855 SM00932 Scaffold protein Nfu/NifU N terminal AQ980_18885 SM00530 Helix-turn-helix XRE-family like proteins AQ980_18940 SM00382 ATPases associated with a variety of cellular activities AQ980_18975 SM00382 ATPases associated with a variety of cellular activities AQ980_18980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ980_18995 SM00028 Tetratricopeptide repeats AQ980_19075 SM00894 Excalibur calcium-binding domain AQ980_19130 SM00852 Probable molybdopterin binding domain AQ980_19140 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_19145 SM00100 Cyclic nucleotide-monophosphate binding domain AQ980_19145 SM00419 helix_turn_helix, cAMP Regulatory protein AQ980_19165 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AQ980_19185 SM00460 Transglutaminase/protease-like homologues AQ980_19205 SM00849 Metallo-beta-lactamase superfamily AQ980_19230 SM00829 Enoylreductase AQ980_19250 SM00487 DEAD-like helicases superfamily AQ980_19250 SM00490 helicase superfamily c-terminal domain AQ980_19450 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_19470 SM01005 Alanine racemase, C-terminal domain AQ980_19525 SM00644 AQ980_19525 AQ980_19640 SM00507 HNH nucleases AQ980_19760 SM00530 Helix-turn-helix XRE-family like proteins AQ980_19765 SM00530 Helix-turn-helix XRE-family like proteins AQ980_19770 SM00530 Helix-turn-helix XRE-family like proteins AQ980_19790 SM00855 Phosphoglycerate mutase family AQ980_19800 SM00244 prohibitin homologues AQ980_19885 SM01091 Transporter associated domain AQ980_19910 SM00155 Phospholipase D. Active site motifs. AQ980_19960 SM00855 Phosphoglycerate mutase family AQ980_20035 SM00833 Cobalamin synthesis protein cobW C-terminal domain AQ980_20115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_20115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_20160 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_20170 SM00966 SpoVT / AbrB like domain AQ980_20195 SM00460 Transglutaminase/protease-like homologues AQ980_20220 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_20270 SM00382 ATPases associated with a variety of cellular activities AQ980_20315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_20315 SM00387 Histidine kinase-like ATPases AQ980_20315 SM00388 His Kinase A (phosphoacceptor) domain AQ980_20320 SM00448 cheY-homologous receiver domain AQ980_20320 SM00862 Transcriptional regulatory protein, C terminal AQ980_20395 SM00387 Histidine kinase-like ATPases AQ980_20395 SM00388 His Kinase A (phosphoacceptor) domain AQ980_20400 SM00448 cheY-homologous receiver domain AQ980_20400 SM00862 Transcriptional regulatory protein, C terminal AQ980_20405 SM00382 ATPases associated with a variety of cellular activities AQ980_20415 SM00287 Bacterial SH3 domain homologues AQ980_20480 SM00382 ATPases associated with a variety of cellular activities AQ980_20485 SM00382 ATPases associated with a variety of cellular activities AQ980_20505 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_20540 SM00382 ATPases associated with a variety of cellular activities AQ980_20545 SM00382 ATPases associated with a variety of cellular activities AQ980_20555 SM00833 Cobalamin synthesis protein cobW C-terminal domain AQ980_20645 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AQ980_20645 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AQ980_20645 SM00493 AQ980_20645 AQ980_20665 SM01011 Aminopeptidase P, N-terminal domain AQ980_20690 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AQ980_20700 SM01133 AQ980_20700 AQ980_20765 SM00450 Rhodanese Homology Domain AQ980_20805 SM00850 LytTr DNA-binding domain AQ980_20835 SM00854 Bacterial capsule synthesis protein PGA_cap AQ980_21015 SM00530 Helix-turn-helix XRE-family like proteins AQ980_21045 SM00487 DEAD-like helicases superfamily AQ980_21045 SM00490 helicase superfamily c-terminal domain AQ980_21050 SM00448 cheY-homologous receiver domain AQ980_21055 SM00387 Histidine kinase-like ATPases AQ980_21060 SM00919 Malic enzyme, NAD binding domain AQ980_21060 SM01274 AQ980_21060 AQ980_21085 SM00155 Phospholipase D. Active site motifs. AQ980_21105 SM00382 ATPases associated with a variety of cellular activities AQ980_21115 SM00421 helix_turn_helix, Lux Regulon AQ980_21115 SM00448 cheY-homologous receiver domain AQ980_21150 SM00530 Helix-turn-helix XRE-family like proteins AQ980_21220 SM00422 helix_turn_helix, mercury resistance AQ980_21245 SM00833 Cobalamin synthesis protein cobW C-terminal domain AQ980_21260 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_21260 SM00895 AQ980_21260 AQ980_21300 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_21325 SM00855 Phosphoglycerate mutase family AQ980_21350 SM00849 Metallo-beta-lactamase superfamily AQ980_21350 SM01027 Beta-Casp domain AQ980_21365 SM00382 ATPases associated with a variety of cellular activities AQ980_21385 SM00530 Helix-turn-helix XRE-family like proteins AQ980_21430 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AQ980_21440 SM00382 ATPases associated with a variety of cellular activities AQ980_21440 SM00962 SRP54-type protein, GTPase domain AQ980_21520 SM00260 Two component signalling adaptor domain AQ980_21520 SM00448 cheY-homologous receiver domain AQ980_21555 SM00382 ATPases associated with a variety of cellular activities AQ980_21630 SM00138 Methyltransferase, chemotaxis proteins AQ980_21650 SM00073 Histidine Phosphotransfer domain AQ980_21650 SM00260 Two component signalling adaptor domain AQ980_21650 SM00387 Histidine kinase-like ATPases AQ980_21650 SM01231 AQ980_21650 AQ980_21655 SM00448 cheY-homologous receiver domain AQ980_21730 SM00422 helix_turn_helix, mercury resistance AQ980_21730 SM00871 Bacterial transcription activator, effector binding domain AQ980_21735 SM00849 Metallo-beta-lactamase superfamily AQ980_21785 SM00357 Cold shock protein domain AQ980_21895 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AQ980_21895 SM00475 5'-3' exonuclease AQ980_21925 SM00450 Rhodanese Homology Domain AQ980_21980 SM00491 AQ980_21980 AQ980_21990 SM00981 AQ980_21990 AQ980_22040 SM00060 Fibronectin type 3 domain AQ980_22050 SM00478 endonuclease III AQ980_22075 SM00479 AQ980_22075 AQ980_22075 SM00487 DEAD-like helicases superfamily AQ980_22075 SM00491 AQ980_22075 AQ980_22125 SM00851 MGS-like domain AQ980_22145 SM00986 Uracil DNA glycosylase superfamily AQ980_22145 SM00987 UreE urease accessory protein, C-terminal domain AQ980_22200 SM00914 AQ980_22200 AQ980_22205 SM00028 Tetratricopeptide repeats AQ980_22230 SM00562 AQ980_22230 AQ980_22255 SM00411 bacterial (prokaryotic) histone like domain AQ980_22310 SM01240 AQ980_22310 AQ980_22315 SM00316 Ribosomal protein S1-like RNA-binding domain AQ980_22330 SM00870 AQ980_22330 AQ980_22340 SM00644 AQ980_22340 AQ980_22355 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ980_22365 SM00422 helix_turn_helix, mercury resistance AQ980_22375 SM00257 Lysin motif AQ980_22385 SM00487 DEAD-like helicases superfamily AQ980_22385 SM00490 helicase superfamily c-terminal domain AQ980_22410 SM00257 Lysin motif AQ980_22420 SM00091 PAS domain AQ980_22420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_22420 SM00387 Histidine kinase-like ATPases AQ980_22420 SM00388 His Kinase A (phosphoacceptor) domain AQ980_22425 SM00448 cheY-homologous receiver domain AQ980_22425 SM00862 Transcriptional regulatory protein, C terminal AQ980_22445 SM00363 S4 RNA-binding domain AQ980_22495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_22495 SM00387 Histidine kinase-like ATPases AQ980_22495 SM00388 His Kinase A (phosphoacceptor) domain AQ980_22515 SM00387 Histidine kinase-like ATPases AQ980_22515 SM00388 His Kinase A (phosphoacceptor) domain AQ980_22610 SM00421 helix_turn_helix, Lux Regulon AQ980_22610 SM00448 cheY-homologous receiver domain AQ980_22615 SM00387 Histidine kinase-like ATPases AQ980_22800 SM01329 AQ980_22800 AQ980_22805 SM00917 LeuA allosteric (dimerisation) domain AQ980_22880 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_22995 SM00344 helix_turn_helix ASNC type AQ980_23015 SM00382 ATPases associated with a variety of cellular activities AQ980_23025 SM00382 ATPases associated with a variety of cellular activities AQ980_23030 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_23115 SM00387 Histidine kinase-like ATPases AQ980_23115 SM00388 His Kinase A (phosphoacceptor) domain AQ980_23135 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_23140 SM00387 Histidine kinase-like ATPases AQ980_23140 SM00388 His Kinase A (phosphoacceptor) domain AQ980_23160 SM01007 Class II Aldolase and Adducin N-terminal domain AQ980_23165 SM00365 Leucine-rich repeat, SDS22-like subfamily AQ980_23165 SM00369 Leucine-rich repeats, typical (most populated) subfamily AQ980_23165 SM00725 NEAr Transporter domain AQ980_23175 SM00420 helix_turn_helix, Deoxyribose operon repressor AQ980_23175 SM01134 AQ980_23175 AQ980_23200 SM00382 ATPases associated with a variety of cellular activities AQ980_23235 SM00822 AQ980_23235 AQ980_23305 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_23305 SM00895 AQ980_23305 AQ980_23310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_23310 SM00387 Histidine kinase-like ATPases AQ980_23310 SM00388 His Kinase A (phosphoacceptor) domain AQ980_23315 SM00448 cheY-homologous receiver domain AQ980_23315 SM00862 Transcriptional regulatory protein, C terminal AQ980_23365 SM00014 Acid phosphatase homologues AQ980_23385 SM00382 ATPases associated with a variety of cellular activities AQ980_23405 SM00530 Helix-turn-helix XRE-family like proteins AQ980_23465 SM00382 ATPases associated with a variety of cellular activities AQ980_23515 SM00530 Helix-turn-helix XRE-family like proteins AQ980_23520 SM00861 Transketolase, pyrimidine binding domain AQ980_23580 SM01324 AQ980_23580 AQ980_23655 SM00635 Bacterial Ig-like domain 2 AQ980_23665 SM00100 Cyclic nucleotide-monophosphate binding domain AQ980_23815 SM00954 Region found in RelA / SpoT proteins AQ980_23825 SM01118 AQ980_23825 AQ980_23855 SM00155 Phospholipase D. Active site motifs. AQ980_23895 SM00382 ATPases associated with a variety of cellular activities AQ980_23900 SM00382 ATPases associated with a variety of cellular activities AQ980_23950 SM00825 Beta-ketoacyl synthase AQ980_23980 SM00382 ATPases associated with a variety of cellular activities AQ980_23980 SM01086 C-terminal, D2-small domain, of ClpB protein AQ980_24035 SM00316 Ribosomal protein S1-like RNA-binding domain AQ980_24050 SM00642 Alpha-amylase domain AQ980_24060 SM00530 Helix-turn-helix XRE-family like proteins AQ980_24085 SM00831 Cation transporter/ATPase, N-terminus AQ980_24095 SM01060 AQ980_24095 AQ980_24130 SM00287 Bacterial SH3 domain homologues AQ980_24130 SM00644 AQ980_24130 AQ980_24350 SM00530 Helix-turn-helix XRE-family like proteins AQ980_24355 SM00530 Helix-turn-helix XRE-family like proteins AQ980_24360 SM00530 Helix-turn-helix XRE-family like proteins AQ980_24365 SM00857 Resolvase, N terminal domain AQ980_24475 SM00357 Cold shock protein domain AQ980_24510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_24510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_24535 SM00448 cheY-homologous receiver domain AQ980_24535 SM00862 Transcriptional regulatory protein, C terminal AQ980_24550 SM00342 helix_turn_helix, arabinose operon control protein AQ980_24550 SM00871 Bacterial transcription activator, effector binding domain AQ980_24565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ980_24660 SM00382 ATPases associated with a variety of cellular activities AQ980_24705 SM00849 Metallo-beta-lactamase superfamily AQ980_24715 SM00354 helix_turn _helix lactose operon repressor AQ980_24890 SM00382 ATPases associated with a variety of cellular activities AQ980_24905 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_24980 SM00530 Helix-turn-helix XRE-family like proteins AQ980_24985 SM00835 Cupin AQ980_25010 SM00028 Tetratricopeptide repeats AQ980_25040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ980_25075 SM00829 Enoylreductase AQ980_25080 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_25080 SM00895 AQ980_25080 AQ980_25120 SM00387 Histidine kinase-like ATPases AQ980_25120 SM00388 His Kinase A (phosphoacceptor) domain AQ980_25120 SM00448 cheY-homologous receiver domain AQ980_25125 SM00138 Methyltransferase, chemotaxis proteins AQ980_25130 SM00331 Sigma factor PP2C-like phosphatases AQ980_25130 SM00448 cheY-homologous receiver domain AQ980_25210 SM00460 Transglutaminase/protease-like homologues AQ980_25220 SM00530 Helix-turn-helix XRE-family like proteins AQ980_25245 SM00382 ATPases associated with a variety of cellular activities AQ980_25295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_25325 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_25370 SM00530 Helix-turn-helix XRE-family like proteins AQ980_25375 SM00825 Beta-ketoacyl synthase AQ980_25390 SM00344 helix_turn_helix ASNC type AQ980_25395 SM00849 Metallo-beta-lactamase superfamily AQ980_25470 SM00894 Excalibur calcium-binding domain AQ980_25570 SM00382 ATPases associated with a variety of cellular activities AQ980_25615 SM00487 DEAD-like helicases superfamily AQ980_25615 SM00490 helicase superfamily c-terminal domain AQ980_25630 SM00448 cheY-homologous receiver domain AQ980_25635 SM00091 PAS domain AQ980_25635 SM00387 Histidine kinase-like ATPases AQ980_25675 SM00860 SMI1 / KNR4 family AQ980_25740 SM00849 Metallo-beta-lactamase superfamily AQ980_25755 SM00382 ATPases associated with a variety of cellular activities AQ980_25760 SM00382 ATPases associated with a variety of cellular activities AQ980_25805 SM00646 AQ980_25805 AQ980_25840 SM00047 Lysozyme subfamily 2 AQ980_25875 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ980_25880 SM00644 AQ980_25880 AQ980_25955 SM00382 ATPases associated with a variety of cellular activities AQ980_25965 SM00062 Bacterial periplasmic substrate-binding proteins AQ980_25965 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AQ980_25970 SM00382 ATPases associated with a variety of cellular activities AQ980_25975 SM00382 ATPases associated with a variety of cellular activities AQ980_26010 SM01060 AQ980_26010 AQ980_26070 SM00422 helix_turn_helix, mercury resistance AQ980_26085 SM00344 helix_turn_helix ASNC type AQ980_26185 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AQ980_26240 SM00382 ATPases associated with a variety of cellular activities AQ980_26250 SM00287 Bacterial SH3 domain homologues AQ980_26305 SM00829 Enoylreductase AQ980_26330 SM00450 Rhodanese Homology Domain AQ980_26335 SM00450 Rhodanese Homology Domain AQ980_26345 SM00450 Rhodanese Homology Domain AQ980_26345 SM00849 Metallo-beta-lactamase superfamily AQ980_26350 SM00450 Rhodanese Homology Domain AQ980_26360 SM00450 Rhodanese Homology Domain AQ980_26470 SM00382 ATPases associated with a variety of cellular activities AQ980_26495 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_26585 SM00382 ATPases associated with a variety of cellular activities AQ980_26595 SM00287 Bacterial SH3 domain homologues AQ980_26615 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ980_26755 SM00899 AQ980_26755 AQ980_26855 SM00530 Helix-turn-helix XRE-family like proteins AQ980_26905 SM00530 Helix-turn-helix XRE-family like proteins AQ980_26915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_27070 SM00507 HNH nucleases AQ980_27190 SM00530 Helix-turn-helix XRE-family like proteins AQ980_27200 SM00530 Helix-turn-helix XRE-family like proteins AQ980_27220 SM00770 Zinc dependent phospholipase C (alpha toxin) AQ980_27240 SM00829 Enoylreductase AQ980_27280 SM00382 ATPases associated with a variety of cellular activities AQ980_27295 SM00354 helix_turn _helix lactose operon repressor AQ980_27305 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_27340 SM00448 cheY-homologous receiver domain AQ980_27340 SM00862 Transcriptional regulatory protein, C terminal AQ980_27345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_27345 SM00387 Histidine kinase-like ATPases AQ980_27345 SM00388 His Kinase A (phosphoacceptor) domain AQ980_27395 SM00062 Bacterial periplasmic substrate-binding proteins AQ980_27395 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AQ980_27400 SM00382 ATPases associated with a variety of cellular activities AQ980_27435 SM00642 Alpha-amylase domain AQ980_27445 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_27445 SM00866 AQ980_27445 AQ980_27455 SM00052 Putative diguanylate phosphodiesterase AQ980_27455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ980_27455 SM00267 diguanylate cyclase AQ980_27465 SM00155 Phospholipase D. Active site motifs. AQ980_27470 SM00382 ATPases associated with a variety of cellular activities AQ980_27475 SM00327 von Willebrand factor (vWF) type A domain AQ980_27500 SM00382 ATPases associated with a variety of cellular activities AQ980_27530 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_27540 SM00382 ATPases associated with a variety of cellular activities AQ980_27555 SM01091 Transporter associated domain AQ980_27625 SM00028 Tetratricopeptide repeats AQ980_27625 SM00530 Helix-turn-helix XRE-family like proteins AQ980_27640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_27655 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AQ980_27655 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AQ980_27670 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AQ980_27670 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AQ980_27695 SM00448 cheY-homologous receiver domain AQ980_27695 SM00862 Transcriptional regulatory protein, C terminal AQ980_27700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_27700 SM00387 Histidine kinase-like ATPases AQ980_27700 SM00388 His Kinase A (phosphoacceptor) domain AQ980_27710 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ980_27725 SM00919 Malic enzyme, NAD binding domain AQ980_27725 SM01274 AQ980_27725 AQ980_27735 SM00448 cheY-homologous receiver domain AQ980_27740 SM00387 Histidine kinase-like ATPases AQ980_27745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_27745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_27760 SM00387 Histidine kinase-like ATPases AQ980_27760 SM00388 His Kinase A (phosphoacceptor) domain AQ980_27765 SM00448 cheY-homologous receiver domain AQ980_27765 SM00862 Transcriptional regulatory protein, C terminal AQ980_27790 SM00382 ATPases associated with a variety of cellular activities AQ980_27805 SM00248 ankyrin repeats AQ980_27825 SM00448 cheY-homologous receiver domain AQ980_27830 SM00091 PAS domain AQ980_27830 SM00387 Histidine kinase-like ATPases AQ980_27835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_27835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_27840 SM00244 prohibitin homologues AQ980_27850 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AQ980_27860 SM00365 Leucine-rich repeat, SDS22-like subfamily AQ980_27860 SM00725 NEAr Transporter domain AQ980_27875 SM00763 PrkA AAA domain AQ980_27885 SM00052 Putative diguanylate phosphodiesterase AQ980_27885 SM00091 PAS domain AQ980_27885 SM00267 diguanylate cyclase AQ980_27900 SM00567 E-Z type HEAT repeats AQ980_28060 SM00382 ATPases associated with a variety of cellular activities AQ980_28080 SM00382 ATPases associated with a variety of cellular activities AQ980_28105 SM00478 endonuclease III AQ980_28105 SM00525 AQ980_28105 AQ980_28190 SM00984 UDP binding domain AQ980_28245 SM00530 Helix-turn-helix XRE-family like proteins AQ980_28265 SM00382 ATPases associated with a variety of cellular activities AQ980_28285 SM00478 endonuclease III AQ980_28375 SM00226 Low molecular weight phosphatase family AQ980_28385 SM00831 Cation transporter/ATPase, N-terminus AQ980_28430 SM00946 Prolyl-tRNA synthetase, C-terminal AQ980_28450 SM00530 Helix-turn-helix XRE-family like proteins AQ980_28485 SM00060 Fibronectin type 3 domain AQ980_28485 SM00636 AQ980_28485 AQ980_28485 SM00637 AQ980_28485 AQ980_28490 SM00382 ATPases associated with a variety of cellular activities AQ980_28515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_28515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_28535 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AQ980_28535 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AQ980_28535 SM00493 AQ980_28535 AQ980_28555 SM00642 Alpha-amylase domain AQ980_28565 SM00382 ATPases associated with a variety of cellular activities AQ980_28580 SM00100 Cyclic nucleotide-monophosphate binding domain AQ980_28580 SM00419 helix_turn_helix, cAMP Regulatory protein AQ980_28610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AQ980_28610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_28615 SM00382 ATPases associated with a variety of cellular activities AQ980_28620 SM00062 Bacterial periplasmic substrate-binding proteins AQ980_28620 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AQ980_28675 SM00387 Histidine kinase-like ATPases AQ980_28675 SM00388 His Kinase A (phosphoacceptor) domain AQ980_28740 SM01007 Class II Aldolase and Adducin N-terminal domain AQ980_28785 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AQ980_28940 SM00507 HNH nucleases AQ980_29065 SM00966 SpoVT / AbrB like domain AQ980_29100 SM00530 Helix-turn-helix XRE-family like proteins AQ980_29105 SM00530 Helix-turn-helix XRE-family like proteins AQ980_29165 SM00382 ATPases associated with a variety of cellular activities AQ980_29180 SM00046 Diacylglycerol kinase catalytic domain (presumed) AQ980_29185 SM00845 GatB domain AQ980_29205 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ980_29235 SM00382 ATPases associated with a variety of cellular activities AQ980_29235 SM00930 AQ980_29235 AQ980_29260 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AQ980_29260 SM00292 breast cancer carboxy-terminal domain AQ980_29260 SM00532 Ligase N family AQ980_29285 SM00244 prohibitin homologues AQ980_29295 SM01209 AQ980_29295 AQ980_29295 SM01210 AQ980_29295 AQ980_29300 SM00798 AICARFT/IMPCHase bienzyme AQ980_29300 SM00851 MGS-like domain AQ980_29325 SM01211 AQ980_29325 AQ980_29340 SM00998 Adenylosuccinate lyase C-terminus AQ980_29350 SM01001 AIR carboxylase AQ980_29390 SM00382 ATPases associated with a variety of cellular activities AQ980_29435 SM00448 cheY-homologous receiver domain AQ980_29435 SM00862 Transcriptional regulatory protein, C terminal AQ980_29440 SM00387 Histidine kinase-like ATPases AQ980_29440 SM00388 His Kinase A (phosphoacceptor) domain AQ980_29445 SM00382 ATPases associated with a variety of cellular activities AQ980_29460 SM01022 AQ980_29460 AQ980_29505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ980_29505 SM00387 Histidine kinase-like ATPases AQ980_29505 SM00388 His Kinase A (phosphoacceptor) domain AQ980_29510 SM00448 cheY-homologous receiver domain AQ980_29510 SM00862 Transcriptional regulatory protein, C terminal AQ980_29525 SM00382 ATPases associated with a variety of cellular activities AQ980_29545 SM00287 Bacterial SH3 domain homologues AQ980_29545 SM00644 AQ980_29545 AQ980_29685 SM00487 DEAD-like helicases superfamily AQ980_29685 SM00490 helicase superfamily c-terminal domain AQ980_29690 SM00028 Tetratricopeptide repeats AQ980_29740 SM00530 Helix-turn-helix XRE-family like proteins AQ980_29750 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain AQ980_29795 SM00382 ATPases associated with a variety of cellular activities AQ980_29815 SM00480 DNA polymerase III beta subunit AQ980_29865 SM00507 HNH nucleases AQ980_29900 SM00422 helix_turn_helix, mercury resistance AQ980_30090 SM00507 HNH nucleases AQ980_30100 SM00507 HNH nucleases AQ980_30110 SM00507 HNH nucleases AQ980_30175 SM00028 Tetratricopeptide repeats AQ980_30290 SM00411 bacterial (prokaryotic) histone like domain AQ980_30305 SM00966 SpoVT / AbrB like domain AQ980_30320 SM00530 Helix-turn-helix XRE-family like proteins AQ980_30380 SM00028 Tetratricopeptide repeats AQ980_30395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_30475 SM00857 Resolvase, N terminal domain AQ980_30490 SM00644 AQ980_30490 AQ980_30510 SM00382 ATPases associated with a variety of cellular activities AQ980_30515 SM01321 AQ980_30515 AQ980_30525 SM00857 Resolvase, N terminal domain AQ980_30540 SM00849 Metallo-beta-lactamase superfamily AQ980_30555 SM00344 helix_turn_helix ASNC type AQ980_30575 SM00857 Resolvase, N terminal domain AQ980_30650 SM00506 Appr-1"-p processing enzyme AQ980_30675 SM00028 Tetratricopeptide repeats AQ980_30680 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_30705 SM00318 Staphylococcal nuclease homologues AQ980_30715 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AQ980_30715 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AQ980_30715 SM00493 AQ980_30715 AQ980_30770 SM00382 ATPases associated with a variety of cellular activities AQ980_30795 SM00966 SpoVT / AbrB like domain AQ980_30800 SM00857 Resolvase, N terminal domain AQ980_30820 SM00344 helix_turn_helix ASNC type AQ980_30840 SM00857 Resolvase, N terminal domain AQ980_30865 SM00382 ATPases associated with a variety of cellular activities AQ980_30870 SM00857 Resolvase, N terminal domain AQ980_30895 SM00421 helix_turn_helix, Lux Regulon AQ980_30915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_30970 SM00028 Tetratricopeptide repeats AQ980_31005 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AQ980_31005 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AQ980_31005 SM00493 AQ980_31005 AQ980_31180 SM00344 helix_turn_helix ASNC type AQ980_31200 SM00857 Resolvase, N terminal domain AQ980_31215 SM00530 Helix-turn-helix XRE-family like proteins AQ980_31285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ980_31365 SM00028 Tetratricopeptide repeats AQ980_31370 SM00155 Phospholipase D. Active site motifs. AQ980_31445 SM00858 AQ980_31445 AQ980_31465 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AQ980_31465 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AQ980_31465 SM00493 AQ980_31465 AQ980_31585 SM00966 SpoVT / AbrB like domain AQ980_31610 SM00382 ATPases associated with a variety of cellular activities AQ980_31625 SM00857 Resolvase, N terminal domain AQ980_31700 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AQ980_31700 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AQ980_31700 SM00493 AQ980_31700 AQ980_31715 SM00857 Resolvase, N terminal domain AQ980_31755 SM00028 Tetratricopeptide repeats AQ980_31815 SM00857 Resolvase, N terminal domain AQ980_32020 SM00507 HNH nucleases AQ980_32070 SM00530 Helix-turn-helix XRE-family like proteins AQ980_32080 SM00530 Helix-turn-helix XRE-family like proteins AQ980_32085 SM00530 Helix-turn-helix XRE-family like proteins AQ980_32345 SM00287 Bacterial SH3 domain homologues AQ980_32345 SM00644 AQ980_32345 AQ980_32355 SM00530 Helix-turn-helix XRE-family like proteins