locus-tag class description CT43_CH0001 PF00308 Bacterial dnaA protein CT43_CH0001 PF08299 Bacterial dnaA protein helix-turn-helix CT43_CH0001 PF11638 DnaA N-terminal domain CT43_CH0002 PF00712 DNA polymerase III beta subunit, N-terminal domain CT43_CH0002 PF02767 DNA polymerase III beta subunit, central domain CT43_CH0002 PF02768 DNA polymerase III beta subunit, C-terminal domain CT43_CH0004 PF02463 RecF/RecN/SMC N terminal domain CT43_CH0005 PF01751 Toprim domain CT43_CH0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0005 PF00986 DNA gyrase B subunit, carboxyl terminus CT43_CH0005 PF00204 DNA gyrase B CT43_CH0006 PF03989 DNA gyrase C-terminal domain, beta-propeller CT43_CH0006 PF00521 DNA gyrase/topoisomerase IV, subunit A CT43_CH0007 PF14175 YaaC-like Protein CT43_CH0008 PF00478 IMP dehydrogenase / GMP reductase domain CT43_CH0008 PF00571 CBS domain CT43_CH0009 PF00768 D-alanyl-D-alanine carboxypeptidase CT43_CH0009 PF07943 Penicillin-binding protein 5, C-terminal domain CT43_CH0010 PF01680 SOR/SNZ family CT43_CH0011 PF01174 SNO glutamine amidotransferase family CT43_CH0012 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CT43_CH0012 PF02403 Seryl-tRNA synthetase N-terminal domain CT43_CH0014 PF01712 Deoxynucleoside kinase CT43_CH0015 PF01712 Deoxynucleoside kinase CT43_CH0016 PF00857 Isochorismatase family CT43_CH0017 PF14437 MafB19-like deaminase CT43_CH0018 PF12169 DNA polymerase III subunits gamma and tau domain III CT43_CH0019 PF02575 YbaB/EbfC DNA-binding family CT43_CH0020 PF02132 RecR protein CT43_CH0020 PF13662 Toprim domain CT43_CH0021 PF10704 Protein of unknown function (DUF2508) CT43_CH0022 PF07441 SigmaK-factor processing regulatory protein BofA CT43_CH0024 PF01276 Orn/Lys/Arg decarboxylase, major domain CT43_CH0024 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CT43_CH0025 PF02223 Thymidylate kinase CT43_CH0026 PF09115 DNA polymerase III, delta subunit, C terminal CT43_CH0027 PF04468 PSP1 C-terminal conserved region CT43_CH0028 PF06156 Initiation control protein YabA CT43_CH0029 PF05175 Methyltransferase small domain CT43_CH0030 PF01541 GIY-YIG catalytic domain CT43_CH0031 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CT43_CH0032 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CT43_CH0032 PF18277 AbrB C-terminal domain CT43_CH0033 PF08264 Anticodon-binding domain of tRNA CT43_CH0033 PF09334 tRNA synthetases class I (M) CT43_CH0033 PF01588 Putative tRNA binding domain CT43_CH0034 PF01026 TatD related DNase CT43_CH0035 PF13662 Toprim domain CT43_CH0035 PF13331 Domain of unknown function (DUF4093) CT43_CH0036 PF00398 Ribosomal RNA adenine dimethylase CT43_CH0037 PF05582 YabG peptidase U57 CT43_CH0038 PF06257 Biofilm formation stimulator VEG CT43_CH0039 PF00269 Small, acid-soluble spore proteins, alpha/beta type CT43_CH0040 PF00288 GHMP kinases N terminal domain CT43_CH0040 PF08544 GHMP kinases C terminal CT43_CH0041 PF00156 Phosphoribosyl transferase domain CT43_CH0041 PF09182 Bacterial purine repressor, N-terminal CT43_CH0042 PF01042 Endoribonuclease L-PSP CT43_CH0043 PF04026 SpoVG CT43_CH0044 PF00132 Bacterial transferase hexapeptide (six repeats) CT43_CH0044 PF00483 Nucleotidyl transferase CT43_CH0045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CT43_CH0045 PF14572 Phosphoribosyl synthetase-associated domain CT43_CH0046 PF01195 Peptidyl-tRNA hydrolase CT43_CH0048 PF02559 CarD-like/TRCF domain CT43_CH0048 PF00271 Helicase conserved C-terminal domain CT43_CH0048 PF00270 DEAD/DEAH box helicase CT43_CH0048 PF17757 UvrB interaction domain CT43_CH0048 PF03461 TRCF domain CT43_CH0049 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CT43_CH0049 PF15714 Stage V sporulation protein T C-terminal, transcription factor CT43_CH0050 PF14667 Polysaccharide biosynthesis C-terminal domain CT43_CH0050 PF01943 Polysaccharide biosynthesis protein CT43_CH0051 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CT43_CH0051 PF03819 MazG nucleotide pyrophosphohydrolase domain CT43_CH0052 PF01479 S4 domain CT43_CH0053 PF07873 YabP family CT43_CH0054 PF09578 Spore cortex protein YabQ (Spore_YabQ) CT43_CH0056 PF00575 S1 RNA binding domain CT43_CH0057 PF07228 Stage II sporulation protein E (SpoIIE) CT43_CH0058 PF01171 PP-loop family CT43_CH0058 PF11734 TilS substrate C-terminal domain CT43_CH0058 PF09179 TilS substrate binding domain CT43_CH0060 PF17862 AAA+ lid domain CT43_CH0060 PF06480 FtsH Extracellular CT43_CH0060 PF01434 Peptidase family M41 CT43_CH0060 PF00004 ATPase family associated with various cellular activities (AAA) CT43_CH0061 PF03309 Type III pantothenate kinase CT43_CH0062 PF01430 Hsp33 protein CT43_CH0063 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH0064 PF00425 chorismate binding enzyme CT43_CH0064 PF04715 Anthranilate synthase component I, N terminal region CT43_CH0065 PF00117 Glutamine amidotransferase class-I CT43_CH0066 PF01063 Amino-transferase class IV CT43_CH0067 PF00809 Pterin binding enzyme CT43_CH0068 PF02152 Dihydroneopterin aldolase CT43_CH0069 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CT43_CH0070 PF01381 Helix-turn-helix CT43_CH0071 PF01207 Dihydrouridine synthase (Dus) CT43_CH0072 PF01336 OB-fold nucleic acid binding domain CT43_CH0072 PF00152 tRNA synthetases class II (D, K and N) CT43_CH0073 PF00155 Aminotransferase class I and II CT43_CH0073 PF00392 Bacterial regulatory proteins, gntR family CT43_CH0074 PF01619 Proline dehydrogenase CT43_CH0075 PF17727 CtsR C-terminal dimerization domain CT43_CH0075 PF05848 CtsR N-terminal HTH domain CT43_CH0076 PF02151 UvrB/uvrC motif CT43_CH0077 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CT43_CH0078 PF17871 AAA lid domain CT43_CH0078 PF02861 Clp amino terminal domain, pathogenicity island component CT43_CH0078 PF10431 C-terminal, D2-small domain, of ClpB protein CT43_CH0078 PF00004 ATPase family associated with various cellular activities (AAA) CT43_CH0078 PF07724 AAA domain (Cdc48 subfamily) CT43_CH0079 PF18073 Rubredoxin metal binding domain CT43_CH0080 PF10635 DisA bacterial checkpoint controller linker region CT43_CH0080 PF02457 DisA bacterial checkpoint controller nucleotide-binding CT43_CH0082 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CT43_CH0083 PF02542 YgbB family CT43_CH0084 PF00749 tRNA synthetases class I (E and Q), catalytic domain CT43_CH0085 PF06426 Serine acetyltransferase, N-terminal CT43_CH0085 PF00132 Bacterial transferase hexapeptide (six repeats) CT43_CH0086 PF09190 DALR domain CT43_CH0086 PF01406 tRNA synthetases class I (C) catalytic domain CT43_CH0087 PF00636 Ribonuclease III domain CT43_CH0088 PF00588 SpoU rRNA Methylase family CT43_CH0088 PF08032 RNA 2'-O ribose methyltransferase substrate binding CT43_CH0089 PF05991 YacP-like NYN domain CT43_CH0090 PF04542 Sigma-70 region 2 CT43_CH0090 PF08281 Sigma-70, region 4 CT43_CH0091 PF00471 Ribosomal protein L33 CT43_CH0092 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CT43_CH0093 PF02357 Transcription termination factor nusG CT43_CH0093 PF00467 KOW motif CT43_CH0094 PF03946 Ribosomal protein L11, N-terminal domain CT43_CH0094 PF00298 Ribosomal protein L11, RNA binding domain CT43_CH0095 PF00687 Ribosomal protein L1p/L10e family CT43_CH0096 PF00466 Ribosomal protein L10 CT43_CH0098 PF05175 Methyltransferase small domain CT43_CH0099 PF04565 RNA polymerase Rpb2, domain 3 CT43_CH0099 PF04561 RNA polymerase Rpb2, domain 2 CT43_CH0099 PF10385 RNA polymerase beta subunit external 1 domain CT43_CH0099 PF00562 RNA polymerase Rpb2, domain 6 CT43_CH0099 PF04560 RNA polymerase Rpb2, domain 7 CT43_CH0099 PF04563 RNA polymerase beta subunit CT43_CH0101 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CT43_CH0102 PF00164 Ribosomal protein S12/S23 CT43_CH0103 PF00177 Ribosomal protein S7p/S5e CT43_CH0104 PF00679 Elongation factor G C-terminus CT43_CH0104 PF14492 Elongation Factor G, domain II CT43_CH0104 PF03764 Elongation factor G, domain IV CT43_CH0104 PF00009 Elongation factor Tu GTP binding domain CT43_CH0104 PF03144 Elongation factor Tu domain 2 CT43_CH0105 PF03143 Elongation factor Tu C-terminal domain CT43_CH0105 PF00009 Elongation factor Tu GTP binding domain CT43_CH0105 PF03144 Elongation factor Tu domain 2 CT43_CH0107 PF00338 Ribosomal protein S10p/S20e CT43_CH0108 PF00297 Ribosomal protein L3 CT43_CH0109 PF00573 Ribosomal protein L4/L1 family CT43_CH0110 PF00276 Ribosomal protein L23 CT43_CH0111 PF03947 Ribosomal Proteins L2, C-terminal domain CT43_CH0111 PF00181 Ribosomal Proteins L2, RNA binding domain CT43_CH0112 PF00203 Ribosomal protein S19 CT43_CH0113 PF00237 Ribosomal protein L22p/L17e CT43_CH0114 PF07650 KH domain CT43_CH0114 PF00189 Ribosomal protein S3, C-terminal domain CT43_CH0115 PF00252 Ribosomal protein L16p/L10e CT43_CH0116 PF00831 Ribosomal L29 protein CT43_CH0117 PF00366 Ribosomal protein S17 CT43_CH0118 PF00238 Ribosomal protein L14p/L23e CT43_CH0119 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CT43_CH0119 PF00467 KOW motif CT43_CH0120 PF00673 ribosomal L5P family C-terminus CT43_CH0120 PF00281 Ribosomal protein L5 CT43_CH0121 PF00253 Ribosomal protein S14p/S29e CT43_CH0122 PF00410 Ribosomal protein S8 CT43_CH0123 PF00347 Ribosomal protein L6 CT43_CH0124 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CT43_CH0125 PF00333 Ribosomal protein S5, N-terminal domain CT43_CH0125 PF03719 Ribosomal protein S5, C-terminal domain CT43_CH0126 PF00327 Ribosomal protein L30p/L7e CT43_CH0127 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CT43_CH0128 PF00344 SecY translocase CT43_CH0129 PF05191 Adenylate kinase, active site lid CT43_CH0130 PF00557 Metallopeptidase family M24 CT43_CH0131 PF01176 Translation initiation factor 1A / IF-1 CT43_CH0132 PF00444 Ribosomal protein L36 CT43_CH0133 PF00416 Ribosomal protein S13/S18 CT43_CH0134 PF00411 Ribosomal protein S11 CT43_CH0135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CT43_CH0135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CT43_CH0135 PF01000 RNA polymerase Rpb3/RpoA insert domain CT43_CH0136 PF01196 Ribosomal protein L17 CT43_CH0137 PF00005 ABC transporter CT43_CH0138 PF00005 ABC transporter CT43_CH0139 PF02361 Cobalt transport protein CT43_CH0140 PF01416 tRNA pseudouridine synthase CT43_CH0141 PF00572 Ribosomal protein L13 CT43_CH0142 PF00380 Ribosomal protein S9/S16 CT43_CH0144 PF01520 N-acetylmuramoyl-L-alanine amidase CT43_CH0145 PF10609 NUBPL iron-transfer P-loop NTPase CT43_CH0146 PF17898 Spore germination GerD central core domain CT43_CH0147 PF14089 KinB-signalling pathway activation in sporulation CT43_CH0148 PF01522 Polysaccharide deacetylase CT43_CH0150 PF02595 Glycerate kinase family CT43_CH0151 PF00491 Arginase family CT43_CH0152 PF02457 DisA bacterial checkpoint controller nucleotide-binding CT43_CH0153 PF07949 YbbR-like protein CT43_CH0155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CT43_CH0155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CT43_CH0155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CT43_CH0155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CT43_CH0156 PF01380 SIS domain CT43_CH0157 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CT43_CH0157 PF00326 Prolyl oligopeptidase family CT43_CH0162 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0163 PF09383 NIL domain CT43_CH0163 PF00005 ABC transporter CT43_CH0164 PF03180 NLPA lipoprotein CT43_CH0165 PF00107 Zinc-binding dehydrogenase CT43_CH0165 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH0167 PF01565 FAD binding domain CT43_CH0168 PF07690 Major Facilitator Superfamily CT43_CH0170 PF07690 Major Facilitator Superfamily CT43_CH0174 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0175 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0175 PF12911 N-terminal TM domain of oligopeptide transport permease C CT43_CH0176 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH0176 PF00005 ABC transporter CT43_CH0177 PF00005 ABC transporter CT43_CH0177 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH0178 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH0181 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH0182 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH0183 PF00248 Aldo/keto reductase family CT43_CH0184 PF03807 NADP oxidoreductase coenzyme F420-dependent CT43_CH0184 PF14748 Pyrroline-5-carboxylate reductase dimerisation CT43_CH0185 PF04973 Nicotinamide mononucleotide transporter CT43_CH0186 PF06800 Sugar transport protein CT43_CH0188 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0190 PF12728 Helix-turn-helix domain CT43_CH0190 PF12727 PBP superfamily domain CT43_CH0191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH0191 PF03466 LysR substrate binding domain CT43_CH0192 PF00892 EamA-like transporter family CT43_CH0193 PF14142 YrzO-like protein CT43_CH0194 PF01553 Acyltransferase CT43_CH0195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CT43_CH0195 PF00356 Bacterial regulatory proteins, lacI family CT43_CH0196 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH0196 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH0200 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CT43_CH0204 PF00005 ABC transporter CT43_CH0204 PF16326 ABC transporter C-terminal domain CT43_CH0204 PF12848 ABC transporter CT43_CH0205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH0206 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0208 PF00005 ABC transporter CT43_CH0208 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH0209 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH0209 PF00005 ABC transporter CT43_CH0213 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH0214 PF01557 Fumarylacetoacetate (FAA) hydrolase family CT43_CH0216 PF13520 Amino acid permease CT43_CH0218 PF07690 Major Facilitator Superfamily CT43_CH0219 PF07478 D-ala D-ala ligase C-terminus CT43_CH0219 PF01820 D-ala D-ala ligase N-terminus CT43_CH0220 PF01225 Mur ligase family, catalytic domain CT43_CH0220 PF02875 Mur ligase family, glutamate ligase domain CT43_CH0220 PF08245 Mur ligase middle domain CT43_CH0221 PF00270 DEAD/DEAH box helicase CT43_CH0221 PF00271 Helicase conserved C-terminal domain CT43_CH0222 PF03851 UV-endonuclease UvdE CT43_CH0223 PF01694 Rhomboid family CT43_CH0224 PF01648 4'-phosphopantetheinyl transferase superfamily CT43_CH0226 PF01168 Alanine racemase, N-terminal domain CT43_CH0226 PF00842 Alanine racemase, C-terminal domain CT43_CH0227 PF01402 Ribbon-helix-helix protein, copG family CT43_CH0228 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CT43_CH0229 PF00575 S1 RNA binding domain CT43_CH0229 PF09371 Tex-like protein N-terminal domain CT43_CH0229 PF16921 Tex protein YqgF-like domain CT43_CH0229 PF17674 HHH domain CT43_CH0230 PF16921 Tex protein YqgF-like domain CT43_CH0230 PF17674 HHH domain CT43_CH0230 PF09371 Tex-like protein N-terminal domain CT43_CH0230 PF00575 S1 RNA binding domain CT43_CH0231 PF17283 SprT-like zinc ribbon domain CT43_CH0231 PF10263 SprT-like family CT43_CH0232 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CT43_CH0233 PF00814 Glycoprotease family CT43_CH0234 PF00583 Acetyltransferase (GNAT) family CT43_CH0235 PF00814 Glycoprotease family CT43_CH0236 PF00005 ABC transporter CT43_CH0236 PF16326 ABC transporter C-terminal domain CT43_CH0236 PF12848 ABC transporter CT43_CH0237 PF06971 Putative DNA-binding protein N-terminus CT43_CH0237 PF02629 CoA binding domain CT43_CH0239 PF02517 CPBP intramembrane metalloprotease CT43_CH0240 PF00166 Chaperonin 10 Kd subunit CT43_CH0241 PF00118 TCP-1/cpn60 chaperonin family CT43_CH0243 PF14449 Pre-toxin TG CT43_CH0243 PF04740 LXG domain of WXG superfamily CT43_CH0245 PF00958 GMP synthase C terminal domain CT43_CH0245 PF02540 NAD synthase CT43_CH0245 PF00117 Glutamine amidotransferase class-I CT43_CH0246 PF00860 Permease family CT43_CH0247 PF00486 Transcriptional regulatory protein, C terminal CT43_CH0247 PF00072 Response regulator receiver domain CT43_CH0248 PF16736 Single Cache-like CT43_CH0248 PF00989 PAS fold CT43_CH0248 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0248 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH0250 PF01323 DSBA-like thioredoxin domain CT43_CH0251 PF05045 Rhamnan synthesis protein F CT43_CH0251 PF14307 Glycosyltransferase WbsX CT43_CH0252 PF00665 Integrase core domain CT43_CH0253 PF01695 IstB-like ATP binding protein CT43_CH0254 PF14307 Glycosyltransferase WbsX CT43_CH0254 PF05045 Rhamnan synthesis protein F CT43_CH0258 PF01370 NAD dependent epimerase/dehydratase family CT43_CH0260 PF00535 Glycosyl transferase family 2 CT43_CH0261 PF00892 EamA-like transporter family CT43_CH0264 PF00731 AIR carboxylase CT43_CH0265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CT43_CH0265 PF02222 ATP-grasp domain CT43_CH0266 PF00206 Lyase CT43_CH0266 PF10397 Adenylosuccinate lyase C-terminus CT43_CH0267 PF01259 SAICAR synthetase CT43_CH0268 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CT43_CH0270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CT43_CH0270 PF02769 AIR synthase related protein, C-terminal domain CT43_CH0270 PF00586 AIR synthase related protein, N-terminal domain CT43_CH0271 PF00156 Phosphoribosyl transferase domain CT43_CH0272 PF00586 AIR synthase related protein, N-terminal domain CT43_CH0272 PF02769 AIR synthase related protein, C-terminal domain CT43_CH0273 PF00551 Formyl transferase CT43_CH0274 PF02142 MGS-like domain CT43_CH0274 PF01808 AICARFT/IMPCHase bienzyme CT43_CH0275 PF02844 Phosphoribosylglycinamide synthetase, N domain CT43_CH0275 PF02843 Phosphoribosylglycinamide synthetase, C domain CT43_CH0275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CT43_CH0277 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH0277 PF03466 LysR substrate binding domain CT43_CH0281 PF01884 PcrB family CT43_CH0282 PF13361 UvrD-like helicase C-terminal domain CT43_CH0282 PF00580 UvrD/REP helicase N-terminal domain CT43_CH0283 PF03120 NAD-dependent DNA ligase OB-fold domain CT43_CH0283 PF00533 BRCA1 C Terminus (BRCT) domain CT43_CH0283 PF01653 NAD-dependent DNA ligase adenylation domain CT43_CH0283 PF12826 Helix-hairpin-helix motif CT43_CH0283 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CT43_CH0284 PF07537 CamS sex pheromone cAM373 precursor CT43_CH0285 PF01925 Sulfite exporter TauE/SafE CT43_CH0286 PF00171 Aldehyde dehydrogenase family CT43_CH0287 PF00857 Isochorismatase family CT43_CH0288 PF09383 NIL domain CT43_CH0288 PF00005 ABC transporter CT43_CH0289 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0290 PF03180 NLPA lipoprotein CT43_CH0292 PF02374 Anion-transporting ATPase CT43_CH0292 PF17886 HSP20-like domain found in ArsA CT43_CH0293 PF01047 MarR family CT43_CH0294 PF05360 yiaA/B two helix domain CT43_CH0295 PF02686 Glu-tRNAGln amidotransferase C subunit CT43_CH0296 PF01425 Amidase CT43_CH0297 PF02934 GatB/GatE catalytic domain CT43_CH0297 PF02637 GatB domain CT43_CH0298 PF00781 Diacylglycerol kinase catalytic domain CT43_CH0299 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH0300 PF00202 Aminotransferase class-III CT43_CH0301 PF00158 Sigma-54 interaction domain CT43_CH0302 PF00171 Aldehyde dehydrogenase family CT43_CH0303 PF00893 Small Multidrug Resistance protein CT43_CH0305 PF02073 Thermophilic metalloprotease (M29) CT43_CH0309 PF01773 Na+ dependent nucleoside transporter N-terminus CT43_CH0309 PF07662 Na+ dependent nucleoside transporter C-terminus CT43_CH0309 PF07670 Nucleoside recognition CT43_CH0310 PF05958 tRNA (Uracil-5-)-methyltransferase CT43_CH0310 PF01938 TRAM domain CT43_CH0310 PF13847 Methyltransferase domain CT43_CH0311 PF01207 Dihydrouridine synthase (Dus) CT43_CH0312 PF07308 Protein of unknown function (DUF1456) CT43_CH0315 PF13378 Enolase C-terminal domain-like CT43_CH0315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CT43_CH0318 PF07687 Peptidase dimerisation domain CT43_CH0318 PF01546 Peptidase family M20/M25/M40 CT43_CH0321 PF13192 Thioredoxin domain CT43_CH0321 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH0322 PF00578 AhpC/TSA family CT43_CH0323 PF01636 Phosphotransferase enzyme family CT43_CH0325 PF00596 Class II Aldolase and Adducin N-terminal domain CT43_CH0326 PF01032 FecCD transport family CT43_CH0327 PF01032 FecCD transport family CT43_CH0328 PF01497 Periplasmic binding protein CT43_CH0331 PF12728 Helix-turn-helix domain CT43_CH0336 PF13188 PAS domain CT43_CH0336 PF00989 PAS fold CT43_CH0336 PF13426 PAS domain CT43_CH0336 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0336 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH0340 PF10127 RNA repair pathway DNA polymerase beta family CT43_CH0342 PF01266 FAD dependent oxidoreductase CT43_CH0342 PF00355 Rieske [2Fe-2S] domain CT43_CH0344 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0345 PF01609 Transposase DDE domain CT43_CH0346 PF00497 Bacterial extracellular solute-binding proteins, family 3 CT43_CH0347 PF00005 ABC transporter CT43_CH0348 PF00672 HAMP domain CT43_CH0348 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH0348 PF12729 Four helix bundle sensory module for signal transduction CT43_CH0349 PF01316 Arginine repressor, DNA binding domain CT43_CH0349 PF02863 Arginine repressor, C-terminal domain CT43_CH0351 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CT43_CH0351 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CT43_CH0352 PF13520 Amino acid permease CT43_CH0353 PF00696 Amino acid kinase family CT43_CH0354 PF00027 Cyclic nucleotide-binding domain CT43_CH0354 PF13545 Crp-like helix-turn-helix domain CT43_CH0356 PF01565 FAD binding domain CT43_CH0356 PF08031 Berberine and berberine like CT43_CH0357 PF00128 Alpha amylase, catalytic domain CT43_CH0357 PF16657 Maltogenic Amylase, C-terminal domain CT43_CH0358 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CT43_CH0358 PF02378 Phosphotransferase system, EIIC CT43_CH0358 PF00367 phosphotransferase system, EIIB CT43_CH0359 PF03372 Endonuclease/Exonuclease/phosphatase family CT43_CH0360 PF01061 ABC-2 type transporter CT43_CH0361 PF01751 Toprim domain CT43_CH0361 PF01131 DNA topoisomerase CT43_CH0362 PF02110 Hydroxyethylthiazole kinase family CT43_CH0363 PF02581 Thiamine monophosphate synthase CT43_CH0364 PF03605 Anaerobic c4-dicarboxylate membrane transporter CT43_CH0365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH0365 PF00672 HAMP domain CT43_CH0366 PF00501 AMP-binding enzyme CT43_CH0366 PF13193 AMP-binding enzyme C-terminal domain CT43_CH0366 PF00668 Condensation domain CT43_CH0366 PF00550 Phosphopantetheine attachment site CT43_CH0366 PF00975 Thioesterase domain CT43_CH0367 PF01910 Thiamine-binding protein CT43_CH0368 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0370 PF00005 ABC transporter CT43_CH0371 PF12848 ABC transporter CT43_CH0371 PF00005 ABC transporter CT43_CH0372 PF00041 Fibronectin type III domain CT43_CH0372 PF00704 Glycosyl hydrolases family 18 CT43_CH0377 PF08360 QacR-like protein, C-terminal region CT43_CH0377 PF00440 Bacterial regulatory proteins, tetR family CT43_CH0380 PF11700 Vacuole effluxer Atg22 like CT43_CH0383 PF09180 Prolyl-tRNA synthetase, C-terminal CT43_CH0383 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CT43_CH0383 PF03129 Anticodon binding domain CT43_CH0385 PF00480 ROK family CT43_CH0386 PF02342 TerD domain CT43_CH0387 PF02342 TerD domain CT43_CH0388 PF02342 TerD domain CT43_CH0389 PF03741 Integral membrane protein TerC family CT43_CH0390 PF14266 Putative component of 'biosynthetic module' CT43_CH0391 PF05816 Toxic anion resistance protein (TelA) CT43_CH0392 PF00689 Cation transporting ATPase, C-terminus CT43_CH0392 PF00690 Cation transporter/ATPase, N-terminus CT43_CH0393 PF06569 Protein of unknown function (DUF1128) CT43_CH0394 PF01451 Low molecular weight phosphotyrosine protein phosphatase CT43_CH0396 PF03631 Virulence factor BrkB CT43_CH0398 PF00892 EamA-like transporter family CT43_CH0400 PF10502 Signal peptidase, peptidase S26 CT43_CH0402 PF09335 SNARE associated Golgi protein CT43_CH0405 PF16242 Pyridoxamine 5'-phosphate oxidase like CT43_CH0406 PF01699 Sodium/calcium exchanger protein CT43_CH0407 PF14167 YfkD-like protein CT43_CH0408 PF08756 YfkB-like domain CT43_CH0408 PF04055 Radical SAM superfamily CT43_CH0410 PF05681 Fumarate hydratase (Fumerase) CT43_CH0410 PF05683 Fumarase C-terminus CT43_CH0411 PF01522 Polysaccharide deacetylase CT43_CH0412 PF00730 HhH-GPD superfamily base excision DNA repair protein CT43_CH0413 PF05958 tRNA (Uracil-5-)-methyltransferase CT43_CH0413 PF01938 TRAM domain CT43_CH0414 PF01416 tRNA pseudouridine synthase CT43_CH0416 PF13426 PAS domain CT43_CH0416 PF02954 Bacterial regulatory protein, Fis family CT43_CH0416 PF00158 Sigma-54 interaction domain CT43_CH0418 PF00324 Amino acid permease CT43_CH0419 PF07687 Peptidase dimerisation domain CT43_CH0419 PF01546 Peptidase family M20/M25/M40 CT43_CH0423 PF04960 Glutaminase CT43_CH0424 PF00367 phosphotransferase system, EIIB CT43_CH0424 PF02378 Phosphotransferase system, EIIC CT43_CH0425 PF00144 Beta-lactamase CT43_CH0428 PF00535 Glycosyl transferase family 2 CT43_CH0429 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CT43_CH0429 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CT43_CH0429 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CT43_CH0430 PF02911 Formyl transferase, C-terminal domain CT43_CH0430 PF01370 NAD dependent epimerase/dehydratase family CT43_CH0430 PF00551 Formyl transferase CT43_CH0431 PF00535 Glycosyl transferase family 2 CT43_CH0432 PF02901 Pyruvate formate lyase-like CT43_CH0432 PF01228 Glycine radical CT43_CH0433 PF04055 Radical SAM superfamily CT43_CH0434 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CT43_CH0434 PF04101 Glycosyltransferase family 28 C-terminal domain CT43_CH0437 PF01979 Amidohydrolase family CT43_CH0438 PF01370 NAD dependent epimerase/dehydratase family CT43_CH0438 PF08338 Domain of unknown function (DUF1731) CT43_CH0439 PF02631 RecX family CT43_CH0441 PF08176 Small acid-soluble spore protein K family CT43_CH0442 PF14043 WVELL protein CT43_CH0443 PF04307 LexA-binding, inner membrane-associated putative hydrolase CT43_CH0444 PF14815 NUDIX domain CT43_CH0444 PF00730 HhH-GPD superfamily base excision DNA repair protein CT43_CH0446 PF04259 Small, acid-soluble spore protein, gamma-type CT43_CH0448 PF14182 YgaB-like protein CT43_CH0450 PF00005 ABC transporter CT43_CH0450 PF00664 ABC transporter transmembrane region CT43_CH0451 PF06081 Aromatic acid exporter family member 1 CT43_CH0452 PF01645 Conserved region in glutamate synthase CT43_CH0452 PF01493 GXGXG motif CT43_CH0452 PF00310 Glutamine amidotransferases class-II CT43_CH0452 PF04898 Glutamate synthase central domain CT43_CH0453 PF00202 Aminotransferase class-III CT43_CH0454 PF00005 ABC transporter CT43_CH0458 PF00578 AhpC/TSA family CT43_CH0459 PF01475 Ferric uptake regulator family CT43_CH0461 PF11023 Zinc-ribbon containing domain CT43_CH0463 PF01709 Transcriptional regulator CT43_CH0464 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH0464 PF00293 NUDIX domain CT43_CH0465 PF00912 Transglycosylase CT43_CH0465 PF00905 Penicillin binding protein transpeptidase domain CT43_CH0466 PF13462 Thioredoxin CT43_CH0467 PF08331 Domain of unknown function (DUF1730) CT43_CH0468 PF12671 Putative amidase domain CT43_CH0469 PF00588 SpoU rRNA Methylase family CT43_CH0470 PF03707 Bacterial signalling protein N terminal repeat CT43_CH0470 PF00990 Diguanylate cyclase, GGDEF domain CT43_CH0470 PF00563 EAL domain CT43_CH0471 PF06798 PrkA serine protein kinase C-terminal domain CT43_CH0471 PF08298 PrkA AAA domain CT43_CH0472 PF04285 Protein of unknown function (DUF444) CT43_CH0475 PF02028 BCCT, betaine/carnitine/choline family transporter CT43_CH0476 PF08453 Peptidase family M9 N-terminal CT43_CH0476 PF01752 Collagenase CT43_CH0476 PF18496 Collagenase G catalytic helper subdomain CT43_CH0478 PF15975 Flotillin CT43_CH0478 PF01145 SPFH domain / Band 7 family CT43_CH0479 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH0479 PF02743 Cache domain CT43_CH0479 PF00672 HAMP domain CT43_CH0480 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CT43_CH0480 PF00989 PAS fold CT43_CH0480 PF17203 Single cache domain 3 CT43_CH0480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0481 PF00072 Response regulator receiver domain CT43_CH0481 PF12431 Transcriptional regulator CT43_CH0482 PF03600 Citrate transporter CT43_CH0487 PF04309 Glycerol-3-phosphate responsive antiterminator CT43_CH0488 PF17912 MalK OB fold domain CT43_CH0488 PF00005 ABC transporter CT43_CH0489 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0490 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0491 PF13416 Bacterial extracellular solute-binding protein CT43_CH0492 PF00149 Calcineurin-like phosphoesterase CT43_CH0493 PF00486 Transcriptional regulatory protein, C terminal CT43_CH0493 PF00072 Response regulator receiver domain CT43_CH0494 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH0494 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0496 PF13529 Peptidase_C39 like family CT43_CH0497 PF02743 Cache domain CT43_CH0497 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH0497 PF00672 HAMP domain CT43_CH0498 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0498 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CT43_CH0498 PF17203 Single cache domain 3 CT43_CH0498 PF00989 PAS fold CT43_CH0499 PF00072 Response regulator receiver domain CT43_CH0500 PF03390 2-hydroxycarboxylate transporter family CT43_CH0501 PF00390 Malic enzyme, N-terminal domain CT43_CH0501 PF03949 Malic enzyme, NAD binding domain CT43_CH0503 PF00892 EamA-like transporter family CT43_CH0504 PF00155 Aminotransferase class I and II CT43_CH0504 PF00392 Bacterial regulatory proteins, gntR family CT43_CH0506 PF00672 HAMP domain CT43_CH0506 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH0506 PF18698 Histidine kinase sensor domain CT43_CH0506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0506 PF00989 PAS fold CT43_CH0507 PF00486 Transcriptional regulatory protein, C terminal CT43_CH0507 PF00072 Response regulator receiver domain CT43_CH0510 PF00583 Acetyltransferase (GNAT) family CT43_CH0510 PF13508 Acetyltransferase (GNAT) domain CT43_CH0511 PF02634 FdhD/NarQ family CT43_CH0512 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CT43_CH0512 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CT43_CH0512 PF01568 Molydopterin dinucleotide binding domain CT43_CH0512 PF00384 Molybdopterin oxidoreductase CT43_CH0512 PF00037 4Fe-4S binding domain CT43_CH0513 PF07849 Protein of unknown function (DUF1641) CT43_CH0515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CT43_CH0515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CT43_CH0516 PF13520 Amino acid permease CT43_CH0517 PF01022 Bacterial regulatory protein, arsR family CT43_CH0518 PF00403 Heavy-metal-associated domain CT43_CH0519 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CT43_CH0519 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CT43_CH0519 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CT43_CH0522 PF02868 Thermolysin metallopeptidase, alpha-helical domain CT43_CH0522 PF01447 Thermolysin metallopeptidase, catalytic domain CT43_CH0522 PF03413 Peptidase propeptide and YPEB domain CT43_CH0522 PF07504 Fungalysin/Thermolysin Propeptide Motif CT43_CH0526 PF04294 VanW like protein CT43_CH0527 PF03816 Cell envelope-related transcriptional attenuator domain CT43_CH0528 PF07662 Na+ dependent nucleoside transporter C-terminus CT43_CH0528 PF01773 Na+ dependent nucleoside transporter N-terminus CT43_CH0529 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH0530 PF00571 CBS domain CT43_CH0530 PF03471 Transporter associated domain CT43_CH0530 PF01595 Cyclin M transmembrane N-terminal domain CT43_CH0531 PF00206 Lyase CT43_CH0531 PF10415 Fumarase C C-terminus CT43_CH0532 PF02652 L-lactate permease CT43_CH0533 PF01022 Bacterial regulatory protein, arsR family CT43_CH0534 PF08141 Small acid-soluble spore protein H family CT43_CH0535 PF00854 POT family CT43_CH0536 PF01497 Periplasmic binding protein CT43_CH0537 PF01032 FecCD transport family CT43_CH0538 PF01032 FecCD transport family CT43_CH0539 PF00005 ABC transporter CT43_CH0541 PF00155 Aminotransferase class I and II CT43_CH0542 PF01370 NAD dependent epimerase/dehydratase family CT43_CH0543 PF00293 NUDIX domain CT43_CH0543 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH0544 PF00092 von Willebrand factor type A domain CT43_CH0545 PF07728 AAA domain (dynein-related subfamily) CT43_CH0546 PF13091 PLD-like domain CT43_CH0546 PF13396 Phospholipase_D-nuclease N-terminal CT43_CH0548 PF03707 Bacterial signalling protein N terminal repeat CT43_CH0548 PF00990 Diguanylate cyclase, GGDEF domain CT43_CH0548 PF00563 EAL domain CT43_CH0549 PF13520 Amino acid permease CT43_CH0550 PF00392 Bacterial regulatory proteins, gntR family CT43_CH0550 PF07702 UTRA domain CT43_CH0551 PF02378 Phosphotransferase system, EIIC CT43_CH0551 PF00367 phosphotransferase system, EIIB CT43_CH0552 PF00128 Alpha amylase, catalytic domain CT43_CH0552 PF16657 Maltogenic Amylase, C-terminal domain CT43_CH0555 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH0557 PF01636 Phosphotransferase enzyme family CT43_CH0558 PF01235 Sodium:alanine symporter family CT43_CH0559 PF00005 ABC transporter CT43_CH0560 PF00497 Bacterial extracellular solute-binding proteins, family 3 CT43_CH0561 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0562 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0563 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_CH0564 PF00324 Amino acid permease CT43_CH0567 PF04542 Sigma-70 region 2 CT43_CH0567 PF08281 Sigma-70, region 4 CT43_CH0569 PF13280 WYL domain CT43_CH0569 PF08279 HTH domain CT43_CH0570 PF01872 RibD C-terminal domain CT43_CH0571 PF00672 HAMP domain CT43_CH0571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0571 PF18698 Histidine kinase sensor domain CT43_CH0571 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH0571 PF00989 PAS fold CT43_CH0572 PF00072 Response regulator receiver domain CT43_CH0572 PF00486 Transcriptional regulatory protein, C terminal CT43_CH0577 PF00916 Sulfate permease family CT43_CH0577 PF01740 STAS domain CT43_CH0578 PF00582 Universal stress protein family CT43_CH0580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH0581 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0582 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0583 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH0583 PF00005 ABC transporter CT43_CH0584 PF00005 ABC transporter CT43_CH0584 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH0585 PF07690 Major Facilitator Superfamily CT43_CH0586 PF01047 MarR family CT43_CH0587 PF07690 Major Facilitator Superfamily CT43_CH0588 PF00356 Bacterial regulatory proteins, lacI family CT43_CH0589 PF00294 pfkB family carbohydrate kinase CT43_CH0590 PF05025 RbsD / FucU transport protein family CT43_CH0591 PF00005 ABC transporter CT43_CH0592 PF02653 Branched-chain amino acid transport system / permease component CT43_CH0593 PF13407 Periplasmic binding protein domain CT43_CH0594 PF00923 Transaldolase/Fructose-6-phosphate aldolase CT43_CH0595 PF05547 Immune inhibitor A peptidase M6 CT43_CH0598 PF00107 Zinc-binding dehydrogenase CT43_CH0598 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH0600 PF00882 Zinc dependent phospholipase C CT43_CH0601 PF03372 Endonuclease/Exonuclease/phosphatase family CT43_CH0603 PF01381 Helix-turn-helix CT43_CH0610 PF09588 YqaJ-like viral recombinase domain CT43_CH0611 PF03837 RecT family CT43_CH0613 PF01695 IstB-like ATP binding protein CT43_CH0620 PF04542 Sigma-70 region 2 CT43_CH0620 PF04545 Sigma-70, region 4 CT43_CH0620 PF00140 Sigma-70 factor, region 1.2 CT43_CH0623 PF02498 BRO family, N-terminal domain CT43_CH0623 PF10548 P22AR C-terminal domain CT43_CH0628 PF02796 Helix-turn-helix domain of resolvase CT43_CH0628 PF00239 Resolvase, N terminal domain CT43_CH0646 PF01476 LysM domain CT43_CH0646 PF01510 N-acetylmuramoyl-L-alanine amidase CT43_CH0646 PF01471 Putative peptidoglycan binding domain CT43_CH0650 PF01580 FtsK/SpoIIIE family CT43_CH0650 PF09397 Ftsk gamma domain CT43_CH0650 PF17854 FtsK alpha domain CT43_CH0654 PF01565 FAD binding domain CT43_CH0654 PF04030 D-arabinono-1,4-lactone oxidase CT43_CH0658 PF02673 Bacitracin resistance protein BacA CT43_CH0659 PF02743 Cache domain CT43_CH0659 PF00672 HAMP domain CT43_CH0659 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH0660 PF06725 3D domain CT43_CH0660 PF01476 LysM domain CT43_CH0661 PF01381 Helix-turn-helix CT43_CH0663 PF04203 Sortase domain CT43_CH0667 PF05525 Branched-chain amino acid transport protein CT43_CH0670 PF00324 Amino acid permease CT43_CH0671 PF00860 Permease family CT43_CH0674 PF13673 Acetyltransferase (GNAT) domain CT43_CH0676 PF02254 TrkA-N domain CT43_CH0676 PF02080 TrkA-C domain CT43_CH0676 PF00999 Sodium/hydrogen exchanger family CT43_CH0678 PF00510 Cytochrome c oxidase subunit III CT43_CH0679 PF00115 Cytochrome C and Quinol oxidase polypeptide I CT43_CH0680 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CT43_CH0681 PF00324 Amino acid permease CT43_CH0683 PF13529 Peptidase_C39 like family CT43_CH0684 PF07687 Peptidase dimerisation domain CT43_CH0684 PF01546 Peptidase family M20/M25/M40 CT43_CH0685 PF11755 Protein of unknown function (DUF3311) CT43_CH0686 PF00474 Sodium:solute symporter family CT43_CH0687 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH0688 PF03845 Spore germination protein CT43_CH0689 PF05504 Spore germination B3/ GerAC like, C-terminal CT43_CH0691 PF07664 Ferrous iron transport protein B C terminus CT43_CH0691 PF17910 FeoB cytosolic helical domain CT43_CH0691 PF02421 Ferrous iron transport protein B CT43_CH0691 PF07670 Nucleoside recognition CT43_CH0692 PF17910 FeoB cytosolic helical domain CT43_CH0692 PF07670 Nucleoside recognition CT43_CH0692 PF07664 Ferrous iron transport protein B C terminus CT43_CH0692 PF02421 Ferrous iron transport protein B CT43_CH0693 PF17910 FeoB cytosolic helical domain CT43_CH0693 PF04023 FeoA domain CT43_CH0693 PF07664 Ferrous iron transport protein B C terminus CT43_CH0693 PF07670 Nucleoside recognition CT43_CH0693 PF02421 Ferrous iron transport protein B CT43_CH0694 PF12849 PBP superfamily domain CT43_CH0695 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0696 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0698 PF00873 AcrB/AcrD/AcrF family CT43_CH0699 PF00571 CBS domain CT43_CH0702 PF00246 Zinc carboxypeptidase CT43_CH0702 PF08239 Bacterial SH3 domain CT43_CH0703 PF03070 TENA/THI-4/PQQC family CT43_CH0704 PF00005 ABC transporter CT43_CH0705 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0706 PF09084 NMT1/THI5 like CT43_CH0707 PF02581 Thiamine monophosphate synthase CT43_CH0708 PF01266 FAD dependent oxidoreductase CT43_CH0709 PF02597 ThiS family CT43_CH0710 PF05690 Thiazole biosynthesis protein ThiG CT43_CH0711 PF00899 ThiF family CT43_CH0712 PF08543 Phosphomethylpyrimidine kinase CT43_CH0715 PF03814 Potassium-transporting ATPase A subunit CT43_CH0717 PF02669 K+-transporting ATPase, c chain CT43_CH0718 PF02702 Osmosensitive K+ channel His kinase sensor domain CT43_CH0719 PF07690 Major Facilitator Superfamily CT43_CH0720 PF01047 MarR family CT43_CH0723 PF00860 Permease family CT43_CH0725 PF03734 L,D-transpeptidase catalytic domain CT43_CH0725 PF17969 L,D-transpeptidase C-terminal domain CT43_CH0727 PF00294 pfkB family carbohydrate kinase CT43_CH0728 PF00251 Glycosyl hydrolases family 32 N-terminal domain CT43_CH0728 PF08244 Glycosyl hydrolases family 32 C terminal CT43_CH0729 PF00367 phosphotransferase system, EIIB CT43_CH0729 PF02378 Phosphotransferase system, EIIC CT43_CH0730 PF00356 Bacterial regulatory proteins, lacI family CT43_CH0730 PF13407 Periplasmic binding protein domain CT43_CH0732 PF00085 Thioredoxin CT43_CH0733 PF02600 Disulfide bond formation protein DsbB CT43_CH0734 PF14148 YhdB-like protein CT43_CH0736 PF03845 Spore germination protein CT43_CH0738 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH0740 PF00881 Nitroreductase family CT43_CH0741 PF04293 SpoVR like protein CT43_CH0743 PF01614 Bacterial transcriptional regulator CT43_CH0743 PF09339 IclR helix-turn-helix domain CT43_CH0746 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT43_CH0746 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH0747 PF02583 Metal-sensitive transcriptional repressor CT43_CH0748 PF00581 Rhodanese-like domain CT43_CH0748 PF01206 Sulfurtransferase TusA CT43_CH0749 PF00753 Metallo-beta-lactamase superfamily CT43_CH0749 PF00581 Rhodanese-like domain CT43_CH0750 PF01206 Sulfurtransferase TusA CT43_CH0751 PF00581 Rhodanese-like domain CT43_CH0753 PF13686 DsrE/DsrF/DrsH-like family CT43_CH0754 PF01925 Sulfite exporter TauE/SafE CT43_CH0756 PF03816 Cell envelope-related transcriptional attenuator domain CT43_CH0757 PF00107 Zinc-binding dehydrogenase CT43_CH0757 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH0758 PF02690 Na+/Pi-cotransporter CT43_CH0759 PF07690 Major Facilitator Superfamily CT43_CH0761 PF08279 HTH domain CT43_CH0761 PF05043 Mga helix-turn-helix domain CT43_CH0761 PF00874 PRD domain CT43_CH0761 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CT43_CH0762 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CT43_CH0763 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CT43_CH0764 PF02378 Phosphotransferase system, EIIC CT43_CH0767 PF06725 3D domain CT43_CH0767 PF01476 LysM domain CT43_CH0768 PF02687 FtsX-like permease family CT43_CH0768 PF12704 MacB-like periplasmic core domain CT43_CH0769 PF00005 ABC transporter CT43_CH0771 PF09529 Integral membrane protein (intg_mem_TP0381) CT43_CH0774 PF05525 Branched-chain amino acid transport protein CT43_CH0775 PF05067 Manganese containing catalase CT43_CH0776 PF12652 CotJB protein CT43_CH0777 PF11007 Spore coat associated protein JA (CotJA) CT43_CH0780 PF02735 Ku70/Ku80 beta-barrel domain CT43_CH0782 PF09335 SNARE associated Golgi protein CT43_CH0789 PF13520 Amino acid permease CT43_CH0790 PF00999 Sodium/hydrogen exchanger family CT43_CH0792 PF01418 Helix-turn-helix domain, rpiR family CT43_CH0792 PF01380 SIS domain CT43_CH0793 PF13580 SIS domain CT43_CH0794 PF00367 phosphotransferase system, EIIB CT43_CH0794 PF02378 Phosphotransferase system, EIIC CT43_CH0796 PF07681 DoxX CT43_CH0799 PF00892 EamA-like transporter family CT43_CH0800 PF01037 Lrp/AsnC ligand binding domain CT43_CH0801 PF00583 Acetyltransferase (GNAT) family CT43_CH0801 PF14698 Argininosuccinate lyase C-terminal CT43_CH0801 PF00206 Lyase CT43_CH0802 PF00106 short chain dehydrogenase CT43_CH0803 PF13411 MerR HTH family regulatory protein CT43_CH0804 PF00893 Small Multidrug Resistance protein CT43_CH0806 PF00440 Bacterial regulatory proteins, tetR family CT43_CH0806 PF17934 Tetracyclin repressor-like, C-terminal domain CT43_CH0807 PF07690 Major Facilitator Superfamily CT43_CH0808 PF01638 HxlR-like helix-turn-helix CT43_CH0811 PF02525 Flavodoxin-like fold CT43_CH0812 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH0812 PF12793 Sugar transport-related sRNA regulator N-term CT43_CH0813 PF07690 Major Facilitator Superfamily CT43_CH0815 PF01965 DJ-1/PfpI family CT43_CH0816 PF00199 Catalase CT43_CH0816 PF06628 Catalase-related immune-responsive CT43_CH0816 PF18011 C-terminal domain found in long catalases CT43_CH0818 PF13520 Amino acid permease CT43_CH0819 PF01177 Asp/Glu/Hydantoin racemase CT43_CH0821 PF00171 Aldehyde dehydrogenase family CT43_CH0822 PF00664 ABC transporter transmembrane region CT43_CH0822 PF00005 ABC transporter CT43_CH0823 PF00005 ABC transporter CT43_CH0823 PF00664 ABC transporter transmembrane region CT43_CH0824 PF00497 Bacterial extracellular solute-binding proteins, family 3 CT43_CH0825 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0826 PF00005 ABC transporter CT43_CH0827 PF00269 Small, acid-soluble spore proteins, alpha/beta type CT43_CH0829 PF14398 YheC/D like ATP-grasp CT43_CH0831 PF04286 Protein of unknown function (DUF445) CT43_CH0832 PF06133 Control of competence regulator ComK, YlbF/YmcA CT43_CH0836 PF00205 Thiamine pyrophosphate enzyme, central domain CT43_CH0836 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CT43_CH0836 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CT43_CH0837 PF03306 Alpha-acetolactate decarboxylase CT43_CH0839 PF02245 Methylpurine-DNA glycosylase (MPG) CT43_CH0841 PF17961 Bacterial Ig domain CT43_CH0841 PF00746 LPXTG cell wall anchor motif CT43_CH0841 PF17210 SdrD B-like domain CT43_CH0841 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CT43_CH0841 PF04650 YSIRK type signal peptide CT43_CH0842 PF01471 Putative peptidoglycan binding domain CT43_CH0842 PF01510 N-acetylmuramoyl-L-alanine amidase CT43_CH0844 PF04055 Radical SAM superfamily CT43_CH0845 PF13193 AMP-binding enzyme C-terminal domain CT43_CH0845 PF00501 AMP-binding enzyme CT43_CH0848 PF00916 Sulfate permease family CT43_CH0848 PF01740 STAS domain CT43_CH0849 PF01943 Polysaccharide biosynthesis protein CT43_CH0849 PF14667 Polysaccharide biosynthesis C-terminal domain CT43_CH0853 PF00378 Enoyl-CoA hydratase/isomerase CT43_CH0857 PF05343 M42 glutamyl aminopeptidase CT43_CH0858 PF00395 S-layer homology domain CT43_CH0858 PF01520 N-acetylmuramoyl-L-alanine amidase CT43_CH0860 PF11121 Protein of unknown function (DUF2639) CT43_CH0861 PF05544 Proline racemase CT43_CH0862 PF02423 Ornithine cyclodeaminase/mu-crystallin family CT43_CH0864 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH0865 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0866 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH0866 PF12911 N-terminal TM domain of oligopeptide transport permease C CT43_CH0867 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH0867 PF00005 ABC transporter CT43_CH0868 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH0868 PF00005 ABC transporter CT43_CH0874 PF16123 Hydroxyacylglutathione hydrolase C-terminus CT43_CH0874 PF00753 Metallo-beta-lactamase superfamily CT43_CH0878 PF00083 Sugar (and other) transporter CT43_CH0879 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CT43_CH0879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0880 PF12431 Transcriptional regulator CT43_CH0880 PF08279 HTH domain CT43_CH0880 PF00072 Response regulator receiver domain CT43_CH0881 PF03401 Tripartite tricarboxylate transporter family receptor CT43_CH0882 PF00293 NUDIX domain CT43_CH0883 PF00271 Helicase conserved C-terminal domain CT43_CH0883 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CT43_CH0883 PF08463 EcoEI R protein C-terminal CT43_CH0883 PF04851 Type III restriction enzyme, res subunit CT43_CH0885 PF00772 DnaB-like helicase N terminal domain CT43_CH0885 PF03796 DnaB-like helicase C terminal domain CT43_CH0888 PF01925 Sulfite exporter TauE/SafE CT43_CH0891 PF07690 Major Facilitator Superfamily CT43_CH0897 PF12146 Serine aminopeptidase, S33 CT43_CH0897 PF13026 Protein of unknown function (DUF3887) CT43_CH0905 PF01066 CDP-alcohol phosphatidyltransferase CT43_CH0908 PF07690 Major Facilitator Superfamily CT43_CH0911 PF02733 Dak1 domain CT43_CH0913 PF02733 Dak1 domain CT43_CH0919 PF01695 IstB-like ATP binding protein CT43_CH0920 PF00665 Integrase core domain CT43_CH0922 PF18801 response regulator aspartate phosphatase H, N terminal CT43_CH0923 PF00395 S-layer homology domain CT43_CH0930 PF12697 Alpha/beta hydrolase family CT43_CH0934 PF05532 CsbD-like CT43_CH0937 PF01740 STAS domain CT43_CH0938 PF13581 Histidine kinase-like ATPase domain CT43_CH0939 PF04545 Sigma-70, region 4 CT43_CH0939 PF04539 Sigma-70 region 3 CT43_CH0939 PF04542 Sigma-70 region 2 CT43_CH0941 PF07228 Stage II sporulation protein E (SpoIIE) CT43_CH0941 PF13426 PAS domain CT43_CH0942 PF01739 CheR methyltransferase, SAM binding domain CT43_CH0942 PF03705 CheR methyltransferase, all-alpha domain CT43_CH0943 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CT43_CH0943 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH0943 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH0943 PF01627 Hpt domain CT43_CH0943 PF00672 HAMP domain CT43_CH0943 PF00072 Response regulator receiver domain CT43_CH0947 PF01906 Putative heavy-metal-binding CT43_CH0949 PF13276 HTH-like domain CT43_CH0949 PF00665 Integrase core domain CT43_CH0949 PF13333 Integrase core domain CT43_CH0952 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_CH0953 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH0953 PF00107 Zinc-binding dehydrogenase CT43_CH0954 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CT43_CH0955 PF11121 Protein of unknown function (DUF2639) CT43_CH0958 PF00149 Calcineurin-like phosphoesterase CT43_CH0959 PF13514 AAA domain CT43_CH0960 PF01336 OB-fold nucleic acid binding domain CT43_CH0960 PF01966 HD domain CT43_CH0962 PF01810 LysE type translocator CT43_CH0964 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH0965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH0966 PF18801 response regulator aspartate phosphatase H, N terminal CT43_CH0966 PF17874 MalT-like TPR region CT43_CH0968 PF08386 TAP-like protein CT43_CH0968 PF00561 alpha/beta hydrolase fold CT43_CH0973 PF00190 Cupin CT43_CH0974 PF01381 Helix-turn-helix CT43_CH0975 PF04309 Glycerol-3-phosphate responsive antiterminator CT43_CH0976 PF00230 Major intrinsic protein CT43_CH0977 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT43_CH0977 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT43_CH0978 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CT43_CH0978 PF01266 FAD dependent oxidoreductase CT43_CH0979 PF03551 Transcriptional regulator PadR-like family CT43_CH0982 PF08281 Sigma-70, region 4 CT43_CH0982 PF04542 Sigma-70 region 2 CT43_CH0985 PF13538 UvrD-like helicase C-terminal domain CT43_CH0989 PF01047 MarR family CT43_CH0990 PF12732 YtxH-like protein CT43_CH0991 PF01230 HIT domain CT43_CH0992 PF00005 ABC transporter CT43_CH0993 PF05975 Bacterial ABC transporter protein EcsB CT43_CH0995 PF12787 EcsC protein family CT43_CH1004 PF00440 Bacterial regulatory proteins, tetR family CT43_CH1004 PF17934 Tetracyclin repressor-like, C-terminal domain CT43_CH1006 PF03703 Bacterial PH domain CT43_CH1007 PF03703 Bacterial PH domain CT43_CH1014 PF10014 2OG-Fe dioxygenase CT43_CH1016 PF00892 EamA-like transporter family CT43_CH1017 PF03703 Bacterial PH domain CT43_CH1018 PF03703 Bacterial PH domain CT43_CH1019 PF03992 Antibiotic biosynthesis monooxygenase CT43_CH1020 PF00912 Transglycosylase CT43_CH1020 PF00905 Penicillin binding protein transpeptidase domain CT43_CH1021 PF01208 Uroporphyrinogen decarboxylase (URO-D) CT43_CH1028 PF03965 Penicillinase repressor CT43_CH1030 PF00440 Bacterial regulatory proteins, tetR family CT43_CH1030 PF17932 Tetracyclin repressor-like, C-terminal domain CT43_CH1034 PF13302 Acetyltransferase (GNAT) domain CT43_CH1035 PF00356 Bacterial regulatory proteins, lacI family CT43_CH1036 PF14149 YhfH-like protein CT43_CH1037 PF12706 Beta-lactamase superfamily domain CT43_CH1038 PF03099 Biotin/lipoate A/B protein ligase family CT43_CH1038 PF10437 Bacterial lipoate protein ligase C-terminus CT43_CH1040 PF00501 AMP-binding enzyme CT43_CH1040 PF13193 AMP-binding enzyme C-terminal domain CT43_CH1041 PF01520 N-acetylmuramoyl-L-alanine amidase CT43_CH1041 PF00395 S-layer homology domain CT43_CH1043 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH1044 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH1045 PF12857 TOBE-like domain CT43_CH1045 PF17850 CysA C-terminal regulatory domain CT43_CH1045 PF00005 ABC transporter CT43_CH1046 PF07968 Leukocidin/Hemolysin toxin family CT43_CH1047 PF00149 Calcineurin-like phosphoesterase CT43_CH1048 PF01966 HD domain CT43_CH1050 PF08281 Sigma-70, region 4 CT43_CH1050 PF04542 Sigma-70 region 2 CT43_CH1051 PF06445 GyrI-like small molecule binding domain CT43_CH1051 PF12833 Helix-turn-helix domain CT43_CH1052 PF02371 Transposase IS116/IS110/IS902 family CT43_CH1052 PF01548 Transposase CT43_CH1053 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1053 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1054 PF00072 Response regulator receiver domain CT43_CH1054 PF00486 Transcriptional regulatory protein, C terminal CT43_CH1059 PF01435 Peptidase family M48 CT43_CH1059 PF16491 CAAX prenyl protease N-terminal, five membrane helices CT43_CH1060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH1060 PF02743 Cache domain CT43_CH1060 PF00672 HAMP domain CT43_CH1061 PF00395 S-layer homology domain CT43_CH1061 PF02018 Carbohydrate binding domain CT43_CH1061 PF00331 Glycosyl hydrolase family 10 CT43_CH1061 PF06452 Carbohydrate family 9 binding domain-like CT43_CH1063 PF01274 Malate synthase CT43_CH1064 PF00463 Isocitrate lyase family CT43_CH1067 PF00313 'Cold-shock' DNA-binding domain CT43_CH1072 PF09335 SNARE associated Golgi protein CT43_CH1073 PF10502 Signal peptidase, peptidase S26 CT43_CH1074 PF13361 UvrD-like helicase C-terminal domain CT43_CH1074 PF12705 PD-(D/E)XK nuclease superfamily CT43_CH1075 PF12705 PD-(D/E)XK nuclease superfamily CT43_CH1075 PF13361 UvrD-like helicase C-terminal domain CT43_CH1075 PF00580 UvrD/REP helicase N-terminal domain CT43_CH1076 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CT43_CH1076 PF01000 RNA polymerase Rpb3/RpoA insert domain CT43_CH1076 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CT43_CH1077 PF10676 Spore germination protein gerPA/gerPF CT43_CH1078 PF10970 Spore germination protein GerPE CT43_CH1080 PF10737 Spore germination protein GerPC CT43_CH1081 PF10803 Spore germination GerPB CT43_CH1082 PF10676 Spore germination protein gerPA/gerPF CT43_CH1083 PF09388 Spo0E like sporulation regulatory protein CT43_CH1084 PF01557 Fumarylacetoacetate (FAA) hydrolase family CT43_CH1086 PF00202 Aminotransferase class-III CT43_CH1089 PF13537 Glutamine amidotransferase domain CT43_CH1089 PF00733 Asparagine synthase CT43_CH1091 PF00199 Catalase CT43_CH1091 PF06628 Catalase-related immune-responsive CT43_CH1092 PF00909 Ammonium Transporter Family CT43_CH1093 PF00128 Alpha amylase, catalytic domain CT43_CH1095 PF04461 Protein of unknown function (DUF520) CT43_CH1096 PF17783 CvfB-like winged helix domain CT43_CH1096 PF13509 S1 domain CT43_CH1099 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH1099 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH1100 PF12758 Protein of unknown function (DUF3813) CT43_CH1103 PF14168 YjzC-like protein CT43_CH1104 PF02861 Clp amino terminal domain, pathogenicity island component CT43_CH1104 PF17871 AAA lid domain CT43_CH1104 PF07724 AAA domain (Cdc48 subfamily) CT43_CH1104 PF00004 ATPase family associated with various cellular activities (AAA) CT43_CH1104 PF10431 C-terminal, D2-small domain, of ClpB protein CT43_CH1108 PF10815 ComZ CT43_CH1110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CT43_CH1110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CT43_CH1111 PF02801 Beta-ketoacyl synthase, C-terminal domain CT43_CH1111 PF00109 Beta-ketoacyl synthase, N-terminal domain CT43_CH1112 PF10026 Predicted Zn-dependent protease (DUF2268) CT43_CH1113 PF12227 Protein of unknown function (DUF3603) CT43_CH1114 PF00579 tRNA synthetases class I (W and Y) CT43_CH1116 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH1117 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH1118 PF12911 N-terminal TM domain of oligopeptide transport permease C CT43_CH1118 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH1119 PF00005 ABC transporter CT43_CH1119 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH1120 PF00005 ABC transporter CT43_CH1120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT43_CH1121 PF01554 MatE CT43_CH1122 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH1124 PF03960 ArsC family CT43_CH1125 PF03741 Integral membrane protein TerC family CT43_CH1126 PF05389 Negative regulator of genetic competence (MecA) CT43_CH1127 PF13396 Phospholipase_D-nuclease N-terminal CT43_CH1127 PF13091 PLD-like domain CT43_CH1129 PF01432 Peptidase family M3 CT43_CH1129 PF08439 Oligopeptidase F CT43_CH1131 PF01152 Bacterial-like globin CT43_CH1132 PF01928 CYTH domain CT43_CH1134 PF04607 Region found in RelA / SpoT proteins CT43_CH1135 PF01513 ATP-NAD kinase CT43_CH1136 PF00849 RNA pseudouridylate synthase CT43_CH1138 PF00149 Calcineurin-like phosphoesterase CT43_CH1140 PF01098 Cell cycle protein CT43_CH1141 PF00535 Glycosyl transferase family 2 CT43_CH1142 PF08241 Methyltransferase domain CT43_CH1143 PF05711 Macrocin-O-methyltransferase (TylF) CT43_CH1150 PF00483 Nucleotidyl transferase CT43_CH1151 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CT43_CH1152 PF16363 GDP-mannose 4,6 dehydratase CT43_CH1153 PF04321 RmlD substrate binding domain CT43_CH1157 PF07098 Protein of unknown function (DUF1360) CT43_CH1161 PF13361 UvrD-like helicase C-terminal domain CT43_CH1161 PF00580 UvrD/REP helicase N-terminal domain CT43_CH1162 PF13673 Acetyltransferase (GNAT) domain CT43_CH1164 PF00756 Putative esterase CT43_CH1167 PF02368 Bacterial Ig-like domain (group 2) CT43_CH1168 PF00474 Sodium:solute symporter family CT43_CH1171 PF02885 Glycosyl transferase family, helical bundle domain CT43_CH1171 PF00591 Glycosyl transferase family, a/b domain CT43_CH1171 PF00117 Glutamine amidotransferase class-I CT43_CH1172 PF02885 Glycosyl transferase family, helical bundle domain CT43_CH1172 PF00591 Glycosyl transferase family, a/b domain CT43_CH1173 PF00218 Indole-3-glycerol phosphate synthase CT43_CH1174 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CT43_CH1175 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH1176 PF00290 Tryptophan synthase alpha chain CT43_CH1178 PF02652 L-lactate permease CT43_CH1179 PF10042 Uncharacterized conserved protein (DUF2278) CT43_CH1182 PF13240 zinc-ribbon domain CT43_CH1184 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH1184 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT43_CH1187 PF01209 ubiE/COQ5 methyltransferase family CT43_CH1188 PF00881 Nitroreductase family CT43_CH1191 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CT43_CH1191 PF00364 Biotin-requiring enzyme CT43_CH1191 PF02817 e3 binding domain CT43_CH1192 PF02779 Transketolase, pyrimidine binding domain CT43_CH1192 PF00676 Dehydrogenase E1 component CT43_CH1192 PF16870 2-oxoglutarate dehydrogenase C-terminal CT43_CH1193 PF01381 Helix-turn-helix CT43_CH1207 PF07943 Penicillin-binding protein 5, C-terminal domain CT43_CH1207 PF00768 D-alanyl-D-alanine carboxypeptidase CT43_CH1209 PF12389 Camelysin metallo-endopeptidase CT43_CH1211 PF12389 Camelysin metallo-endopeptidase CT43_CH1212 PF08671 Anti-repressor SinI CT43_CH1212 PF01381 Helix-turn-helix CT43_CH1214 PF05547 Immune inhibitor A peptidase M6 CT43_CH1215 PF00171 Aldehyde dehydrogenase family CT43_CH1216 PF00005 ABC transporter CT43_CH1216 PF08402 TOBE domain CT43_CH1217 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH1218 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH1219 PF13416 Bacterial extracellular solute-binding protein CT43_CH1221 PF03176 MMPL family CT43_CH1223 PF01479 S4 domain CT43_CH1223 PF00849 RNA pseudouridylate synthase CT43_CH1225 PF00188 Cysteine-rich secretory protein family CT43_CH1226 PF02754 Cysteine-rich domain CT43_CH1226 PF13183 4Fe-4S dicluster domain CT43_CH1227 PF02913 FAD linked oxidases, C-terminal domain CT43_CH1227 PF01565 FAD binding domain CT43_CH1228 PF13556 PucR C-terminal helix-turn-helix domain CT43_CH1228 PF17853 GGDEF-like domain CT43_CH1228 PF05651 Putative sugar diacid recognition CT43_CH1230 PF00072 Response regulator receiver domain CT43_CH1230 PF00486 Transcriptional regulatory protein, C terminal CT43_CH1232 PF00989 PAS fold CT43_CH1232 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1232 PF18698 Histidine kinase sensor domain CT43_CH1232 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1232 PF00672 HAMP domain CT43_CH1233 PF00392 Bacterial regulatory proteins, gntR family CT43_CH1233 PF07729 FCD domain CT43_CH1234 PF02754 Cysteine-rich domain CT43_CH1235 PF11870 Domain of unknown function (DUF3390) CT43_CH1235 PF13183 4Fe-4S dicluster domain CT43_CH1235 PF02589 LUD domain CT43_CH1236 PF02589 LUD domain CT43_CH1237 PF06750 Bacterial Peptidase A24 N-terminal domain CT43_CH1237 PF01478 Type IV leader peptidase family CT43_CH1239 PF01226 Formate/nitrite transporter CT43_CH1240 PF03741 Integral membrane protein TerC family CT43_CH1241 PF02386 Cation transport protein CT43_CH1242 PF00269 Small, acid-soluble spore proteins, alpha/beta type CT43_CH1243 PF01575 MaoC like domain CT43_CH1248 PF00561 alpha/beta hydrolase fold CT43_CH1250 PF02386 Cation transport protein CT43_CH1254 PF00005 ABC transporter CT43_CH1254 PF08402 TOBE domain CT43_CH1255 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH1256 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH1257 PF00266 Aminotransferase class-V CT43_CH1259 PF08220 DeoR-like helix-turn-helix domain CT43_CH1259 PF00455 DeoR C terminal sensor domain CT43_CH1262 PF00596 Class II Aldolase and Adducin N-terminal domain CT43_CH1264 PF04748 Divergent polysaccharide deacetylase CT43_CH1265 PF09388 Spo0E like sporulation regulatory protein CT43_CH1266 PF02743 Cache domain CT43_CH1266 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1266 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1267 PF01047 MarR family CT43_CH1269 PF12867 DinB superfamily CT43_CH1271 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1271 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1271 PF00989 PAS fold CT43_CH1271 PF13188 PAS domain CT43_CH1271 PF13426 PAS domain CT43_CH1272 PF06508 Queuosine biosynthesis protein QueC CT43_CH1273 PF01242 6-pyruvoyl tetrahydropterin synthase CT43_CH1274 PF04055 Radical SAM superfamily CT43_CH1275 PF14489 QueF-like protein CT43_CH1276 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CT43_CH1282 PF07972 NrdI Flavodoxin like CT43_CH1283 PF08343 Ribonucleotide reductase N-terminal CT43_CH1283 PF00317 Ribonucleotide reductase, all-alpha domain CT43_CH1283 PF02867 Ribonucleotide reductase, barrel domain CT43_CH1284 PF00268 Ribonucleotide reductase, small chain CT43_CH1285 PF00392 Bacterial regulatory proteins, gntR family CT43_CH1286 PF00005 ABC transporter CT43_CH1288 PF00005 ABC transporter CT43_CH1292 PF01037 Lrp/AsnC ligand binding domain CT43_CH1294 PF00857 Isochorismatase family CT43_CH1296 PF17676 LD-carboxypeptidase C-terminal domain CT43_CH1296 PF02016 LD-carboxypeptidase N-terminal domain CT43_CH1297 PF03060 Nitronate monooxygenase CT43_CH1298 PF04914 DltD protein CT43_CH1299 PF00550 Phosphopantetheine attachment site CT43_CH1300 PF03062 MBOAT, membrane-bound O-acyltransferase family CT43_CH1301 PF13193 AMP-binding enzyme C-terminal domain CT43_CH1301 PF00501 AMP-binding enzyme CT43_CH1303 PF01546 Peptidase family M20/M25/M40 CT43_CH1303 PF07687 Peptidase dimerisation domain CT43_CH1305 PF00258 Flavodoxin CT43_CH1308 PF01636 Phosphotransferase enzyme family CT43_CH1312 PF01554 MatE CT43_CH1313 PF02673 Bacitracin resistance protein BacA CT43_CH1316 PF01047 MarR family CT43_CH1318 PF00375 Sodium:dicarboxylate symporter family CT43_CH1319 PF02386 Cation transport protein CT43_CH1321 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CT43_CH1323 PF03698 Uncharacterised protein family (UPF0180) CT43_CH1325 PF01063 Amino-transferase class IV CT43_CH1326 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CT43_CH1326 PF00205 Thiamine pyrophosphate enzyme, central domain CT43_CH1326 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CT43_CH1327 PF01842 ACT domain CT43_CH1327 PF10369 Small subunit of acetolactate synthase CT43_CH1328 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CT43_CH1328 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CT43_CH1329 PF00682 HMGL-like CT43_CH1329 PF08502 LeuA allosteric (dimerisation) domain CT43_CH1330 PF00180 Isocitrate/isopropylmalate dehydrogenase CT43_CH1331 PF00330 Aconitase family (aconitate hydratase) CT43_CH1332 PF00694 Aconitase C-terminal domain CT43_CH1333 PF13393 Histidyl-tRNA synthetase CT43_CH1334 PF01634 ATP phosphoribosyltransferase CT43_CH1335 PF00815 Histidinol dehydrogenase CT43_CH1336 PF00475 Imidazoleglycerol-phosphate dehydratase CT43_CH1337 PF00117 Glutamine amidotransferase class-I CT43_CH1338 PF00977 Histidine biosynthesis protein CT43_CH1339 PF00977 Histidine biosynthesis protein CT43_CH1340 PF01502 Phosphoribosyl-AMP cyclohydrolase CT43_CH1341 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CT43_CH1342 PF02811 PHP domain CT43_CH1344 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CT43_CH1344 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CT43_CH1345 PF01066 CDP-alcohol phosphatidyltransferase CT43_CH1346 PF00884 Sulfatase CT43_CH1348 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CT43_CH1348 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CT43_CH1350 PF01507 Phosphoadenosine phosphosulfate reductase family CT43_CH1351 PF01747 ATP-sulfurylase CT43_CH1351 PF14306 PUA-like domain CT43_CH1353 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CT43_CH1353 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CT43_CH1355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CT43_CH1356 PF01903 CbiX CT43_CH1358 PF00209 Sodium:neurotransmitter symporter family CT43_CH1361 PF00375 Sodium:dicarboxylate symporter family CT43_CH1363 PF03553 Na+/H+ antiporter family CT43_CH1367 PF09922 Cell wall-active antibiotics response 4TMS YvqF CT43_CH1368 PF00672 HAMP domain CT43_CH1368 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1368 PF07730 Histidine kinase CT43_CH1369 PF00072 Response regulator receiver domain CT43_CH1369 PF00196 Bacterial regulatory proteins, luxR family CT43_CH1371 PF05525 Branched-chain amino acid transport protein CT43_CH1372 PF01209 ubiE/COQ5 methyltransferase family CT43_CH1377 PF00042 Globin CT43_CH1377 PF00175 Oxidoreductase NAD-binding domain CT43_CH1377 PF00970 Oxidoreductase FAD-binding domain CT43_CH1380 PF01925 Sulfite exporter TauE/SafE CT43_CH1381 PF01384 Phosphate transporter family CT43_CH1382 PF01865 Protein of unknown function DUF47 CT43_CH1383 PF00905 Penicillin binding protein transpeptidase domain CT43_CH1383 PF00912 Transglycosylase CT43_CH1386 PF00989 PAS fold CT43_CH1386 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1386 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1387 PF01904 Protein of unknown function DUF72 CT43_CH1389 PF00589 Phage integrase family CT43_CH1390 PF16736 Single Cache-like CT43_CH1390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1390 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1390 PF00989 PAS fold CT43_CH1391 PF01048 Phosphorylase superfamily CT43_CH1393 PF09924 Uncharacterised conserved protein (DUF2156) CT43_CH1393 PF03706 Lysylphosphatidylglycerol synthase TM region CT43_CH1396 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CT43_CH1396 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CT43_CH1397 PF00768 D-alanyl-D-alanine carboxypeptidase CT43_CH1397 PF07943 Penicillin-binding protein 5, C-terminal domain CT43_CH1398 PF07670 Nucleoside recognition CT43_CH1399 PF07670 Nucleoside recognition CT43_CH1400 PF00849 RNA pseudouridylate synthase CT43_CH1400 PF01479 S4 domain CT43_CH1401 PF00578 AhpC/TSA family CT43_CH1402 PF05140 ResB-like family CT43_CH1403 PF01578 Cytochrome C assembly protein CT43_CH1404 PF00072 Response regulator receiver domain CT43_CH1404 PF00486 Transcriptional regulatory protein, C terminal CT43_CH1405 PF00672 HAMP domain CT43_CH1405 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1405 PF00989 PAS fold CT43_CH1405 PF18698 Histidine kinase sensor domain CT43_CH1405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1406 PF01923 Cobalamin adenosyltransferase CT43_CH1409 PF12822 ECF transporter, substrate-specific component CT43_CH1412 PF00271 Helicase conserved C-terminal domain CT43_CH1412 PF00270 DEAD/DEAH box helicase CT43_CH1413 PF02517 CPBP intramembrane metalloprotease CT43_CH1415 PF00149 Calcineurin-like phosphoesterase CT43_CH1416 PF13411 MerR HTH family regulatory protein CT43_CH1417 PF05389 Negative regulator of genetic competence (MecA) CT43_CH1418 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CT43_CH1418 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CT43_CH1423 PF17763 Glutaminase/Asparaginase C-terminal domain CT43_CH1423 PF00710 Asparaginase, N-terminal CT43_CH1424 PF02224 Cytidylate kinase CT43_CH1425 PF00575 S1 RNA binding domain CT43_CH1426 PF01070 FMN-dependent dehydrogenase CT43_CH1427 PF14140 YpzI-like protein CT43_CH1429 PF14045 YIEGIA protein CT43_CH1431 PF01926 50S ribosome-binding GTPase CT43_CH1431 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CT43_CH1432 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CT43_CH1432 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CT43_CH1434 PF10966 Protein of unknown function (DUF2768) CT43_CH1436 PF09547 Stage IV sporulation protein A (spore_IV_A) CT43_CH1437 PF00216 Bacterial DNA-binding protein CT43_CH1438 PF01227 GTP cyclohydrolase I CT43_CH1439 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CT43_CH1440 PF01209 ubiE/COQ5 methyltransferase family CT43_CH1441 PF00348 Polyprenyl synthetase CT43_CH1442 PF00334 Nucleoside diphosphate kinase CT43_CH1443 PF01264 Chorismate synthase CT43_CH1444 PF01761 3-dehydroquinate synthase CT43_CH1445 PF00155 Aminotransferase class I and II CT43_CH1447 PF08864 UPF0302 domain CT43_CH1447 PF08858 IDEAL domain CT43_CH1448 PF10673 Protein of unknown function (DUF2487) CT43_CH1449 PF00355 Rieske [2Fe-2S] domain CT43_CH1450 PF00033 Cytochrome b/b6/petB CT43_CH1451 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CT43_CH1451 PF00032 Cytochrome b(C-terminal)/b6/petD CT43_CH1452 PF07187 Protein of unknown function (DUF1405) CT43_CH1454 PF09577 Sporulation protein YpjB (SpoYpjB) CT43_CH1455 PF04298 Putative neutral zinc metallopeptidase CT43_CH1457 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH1457 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH1458 PF03819 MazG nucleotide pyrophosphohydrolase domain CT43_CH1459 PF05173 Dihydrodipicolinate reductase, C-terminus CT43_CH1459 PF01113 Dihydrodipicolinate reductase, N-terminus CT43_CH1460 PF02142 MGS-like domain CT43_CH1461 PF02585 GlcNAc-PI de-N-acetylase CT43_CH1462 PF13439 Glycosyltransferase Family 4 CT43_CH1462 PF00534 Glycosyl transferases group 1 CT43_CH1463 PF01743 Poly A polymerase head domain CT43_CH1463 PF12627 Probable RNA and SrmB- binding site of polymerase A CT43_CH1463 PF13735 tRNA nucleotidyltransferase domain 2 putative CT43_CH1464 PF02237 Biotin protein ligase C terminal domain CT43_CH1464 PF03099 Biotin/lipoate A/B protein ligase family CT43_CH1464 PF08279 HTH domain CT43_CH1466 PF02548 Ketopantoate hydroxymethyltransferase CT43_CH1467 PF02569 Pantoate-beta-alanine ligase CT43_CH1468 PF02261 Aspartate decarboxylase CT43_CH1469 PF04851 Type III restriction enzyme, res subunit CT43_CH1469 PF13307 Helicase C-terminal domain CT43_CH1469 PF00929 Exonuclease CT43_CH1470 PF14084 Protein of unknown function (DUF4264) CT43_CH1472 PF00155 Aminotransferase class I and II CT43_CH1473 PF07261 Replication initiation and membrane attachment CT43_CH1474 PF00633 Helix-hairpin-helix motif CT43_CH1474 PF10576 Iron-sulfur binding domain of endonuclease III CT43_CH1474 PF00730 HhH-GPD superfamily base excision DNA repair protein CT43_CH1476 PF00905 Penicillin binding protein transpeptidase domain CT43_CH1476 PF00912 Transglycosylase CT43_CH1477 PF03838 Recombination protein U CT43_CH1478 PF10720 Protein of unknown function (DUF2515) CT43_CH1485 PF06908 YspA SLOG family CT43_CH1486 PF05103 DivIVA protein CT43_CH1487 PF01170 Putative RNA methylase family UPF0020 CT43_CH1487 PF02926 THUMP domain CT43_CH1490 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CT43_CH1492 PF00557 Metallopeptidase family M24 CT43_CH1493 PF00156 Phosphoribosyl transferase domain CT43_CH1494 PF00860 Permease family CT43_CH1495 PF04235 Protein of unknown function (DUF418) CT43_CH1497 PF00350 Dynamin family CT43_CH1499 PF00583 Acetyltransferase (GNAT) family CT43_CH1500 PF10752 Protein of unknown function (DUF2533) CT43_CH1501 PF00581 Rhodanese-like domain CT43_CH1506 PF00689 Cation transporting ATPase, C-terminus CT43_CH1506 PF00690 Cation transporter/ATPase, N-terminus CT43_CH1507 PF01367 5'-3' exonuclease, C-terminal SAM fold CT43_CH1507 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CT43_CH1510 PF02706 Chain length determinant protein CT43_CH1510 PF13807 G-rich domain on putative tyrosine kinase CT43_CH1512 PF02397 Bacterial sugar transferase CT43_CH1515 PF00535 Glycosyl transferase family 2 CT43_CH1516 PF13439 Glycosyltransferase Family 4 CT43_CH1516 PF00534 Glycosyl transferases group 1 CT43_CH1519 PF18014 Acetyltransferase (GNAT) domain CT43_CH1519 PF13673 Acetyltransferase (GNAT) domain CT43_CH1523 PF13456 Reverse transcriptase-like CT43_CH1524 PF01263 Aldose 1-epimerase CT43_CH1529 PF00313 'Cold-shock' DNA-binding domain CT43_CH1530 PF08892 YqcI/YcgG family CT43_CH1531 PF01810 LysE type translocator CT43_CH1535 PF00474 Sodium:solute symporter family CT43_CH1536 PF00202 Aminotransferase class-III CT43_CH1538 PF00999 Sodium/hydrogen exchanger family CT43_CH1539 PF13411 MerR HTH family regulatory protein CT43_CH1539 PF06445 GyrI-like small molecule binding domain CT43_CH1541 PF04239 Protein of unknown function (DUF421) CT43_CH1542 PF02698 DUF218 domain CT43_CH1544 PF00881 Nitroreductase family CT43_CH1554 PF17209 Hfq protein CT43_CH1556 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CT43_CH1556 PF04509 CheC-like family CT43_CH1559 PF01739 CheR methyltransferase, SAM binding domain CT43_CH1559 PF03705 CheR methyltransferase, all-alpha domain CT43_CH1563 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CT43_CH1563 PF00460 Flagella basal body rod protein CT43_CH1564 PF00669 Bacterial flagellin N-terminal helical region CT43_CH1564 PF00700 Bacterial flagellin C-terminal helical region CT43_CH1568 PF00460 Flagella basal body rod protein CT43_CH1569 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CT43_CH1569 PF00460 Flagella basal body rod protein CT43_CH1570 PF02049 Flagellar hook-basal body complex protein FliE CT43_CH1571 PF08345 Flagellar M-ring protein C-terminal CT43_CH1571 PF01514 Secretory protein of YscJ/FliF family CT43_CH1572 PF14842 FliG N-terminal domain CT43_CH1572 PF14841 FliG middle domain CT43_CH1572 PF01706 FliG C-terminal domain CT43_CH1574 PF02874 ATP synthase alpha/beta family, beta-barrel domain CT43_CH1574 PF18269 T3SS EscN ATPase C-terminal domain CT43_CH1574 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CT43_CH1578 PF00460 Flagella basal body rod protein CT43_CH1578 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CT43_CH1578 PF07559 Flagellar basal body protein FlaE CT43_CH1581 PF00072 Response regulator receiver domain CT43_CH1581 PF01584 CheW-like domain CT43_CH1582 PF12181 DNA binding domain of the motility gene repressor (MogR) CT43_CH1583 PF00669 Bacterial flagellin N-terminal helical region CT43_CH1583 PF00700 Bacterial flagellin C-terminal helical region CT43_CH1584 PF00669 Bacterial flagellin N-terminal helical region CT43_CH1584 PF00700 Bacterial flagellin C-terminal helical region CT43_CH1585 PF01464 Transglycosylase SLT domain CT43_CH1587 PF02154 Flagellar motor switch protein FliM CT43_CH1587 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CT43_CH1588 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CT43_CH1588 PF04509 CheC-like family CT43_CH1590 PF00813 FliP family CT43_CH1591 PF01313 Bacterial export proteins, family 3 CT43_CH1593 PF01312 FlhB HrpN YscU SpaS Family CT43_CH1594 PF00771 FHIPEP family CT43_CH1595 PF00448 SRP54-type protein, GTPase domain CT43_CH1596 PF00460 Flagella basal body rod protein CT43_CH1596 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CT43_CH1598 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CT43_CH1598 PF01411 tRNA synthetases class II (A) CT43_CH1598 PF02272 DHHA1 domain CT43_CH1604 PF03992 Antibiotic biosynthesis monooxygenase CT43_CH1605 PF00535 Glycosyl transferase family 2 CT43_CH1605 PF07238 PilZ domain CT43_CH1606 PF08141 Small acid-soluble spore protein H family CT43_CH1611 PF00005 ABC transporter CT43_CH1611 PF08402 TOBE domain CT43_CH1613 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH1616 PF00144 Beta-lactamase CT43_CH1617 PF10787 Uncharacterised protein from bacillus cereus group CT43_CH1621 PF13021 Domain of unknown function (DUF3885) CT43_CH1622 PF00300 Histidine phosphatase superfamily (branch 1) CT43_CH1624 PF00561 alpha/beta hydrolase fold CT43_CH1626 PF01047 MarR family CT43_CH1628 PF13537 Glutamine amidotransferase domain CT43_CH1628 PF00733 Asparagine synthase CT43_CH1632 PF16916 Dimerisation domain of Zinc Transporter CT43_CH1632 PF01545 Cation efflux family CT43_CH1634 PF07729 FCD domain CT43_CH1634 PF00392 Bacterial regulatory proteins, gntR family CT43_CH1635 PF00892 EamA-like transporter family CT43_CH1637 PF02492 CobW/HypB/UreG, nucleotide-binding domain CT43_CH1637 PF07683 Cobalamin synthesis protein cobW C-terminal domain CT43_CH1638 PF03773 Predicted permease CT43_CH1642 PF03553 Na+/H+ antiporter family CT43_CH1643 PF13411 MerR HTH family regulatory protein CT43_CH1645 PF00206 Lyase CT43_CH1645 PF10415 Fumarase C C-terminus CT43_CH1649 PF01554 MatE CT43_CH1650 PF03575 Peptidase family S51 CT43_CH1654 PF02683 Cytochrome C biogenesis protein transmembrane region CT43_CH1655 PF00578 AhpC/TSA family CT43_CH1658 PF18801 response regulator aspartate phosphatase H, N terminal CT43_CH1661 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH1662 PF04286 Protein of unknown function (DUF445) CT43_CH1667 PF00196 Bacterial regulatory proteins, luxR family CT43_CH1667 PF00072 Response regulator receiver domain CT43_CH1668 PF13185 GAF domain CT43_CH1668 PF07730 Histidine kinase CT43_CH1668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1668 PF13492 GAF domain CT43_CH1669 PF00005 ABC transporter CT43_CH1672 PF13091 PLD-like domain CT43_CH1673 PF00696 Amino acid kinase family CT43_CH1674 PF00375 Sodium:dicarboxylate symporter family CT43_CH1675 PF00206 Lyase CT43_CH1675 PF10415 Fumarase C C-terminus CT43_CH1676 PF00390 Malic enzyme, N-terminal domain CT43_CH1676 PF03949 Malic enzyme, NAD binding domain CT43_CH1677 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1678 PF08664 YcbB domain CT43_CH1678 PF00072 Response regulator receiver domain CT43_CH1679 PF00271 Helicase conserved C-terminal domain CT43_CH1679 PF00176 SNF2 family N-terminal domain CT43_CH1679 PF04434 SWIM zinc finger CT43_CH1681 PF03590 Aspartate-ammonia ligase CT43_CH1684 PF00696 Amino acid kinase family CT43_CH1684 PF13840 ACT domain CT43_CH1686 PF13761 Domain of unknown function (DUF4166) CT43_CH1687 PF14158 YndJ-like protein CT43_CH1690 PF03976 Polyphosphate kinase 2 (PPK2) CT43_CH1691 PF03551 Transcriptional regulator PadR-like family CT43_CH1691 PF10400 Virulence activator alpha C-term CT43_CH1692 PF07690 Major Facilitator Superfamily CT43_CH1693 PF07690 Major Facilitator Superfamily CT43_CH1694 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CT43_CH1694 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CT43_CH1696 PF01926 50S ribosome-binding GTPase CT43_CH1696 PF16360 GTP-binding GTPase Middle Region CT43_CH1696 PF13167 GTP-binding GTPase N-terminal CT43_CH1697 PF07690 Major Facilitator Superfamily CT43_CH1698 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH1702 PF00209 Sodium:neurotransmitter symporter family CT43_CH1703 PF03422 Carbohydrate binding module (family 6) CT43_CH1703 PF00457 Glycosyl hydrolases family 11 CT43_CH1703 PF01522 Polysaccharide deacetylase CT43_CH1705 PF04239 Protein of unknown function (DUF421) CT43_CH1709 PF01625 Peptide methionine sulfoxide reductase CT43_CH1711 PF01063 Amino-transferase class IV CT43_CH1712 PF00205 Thiamine pyrophosphate enzyme, central domain CT43_CH1712 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CT43_CH1712 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CT43_CH1714 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CT43_CH1714 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CT43_CH1715 PF00920 Dehydratase family CT43_CH1716 PF00585 C-terminal regulatory domain of Threonine dehydratase CT43_CH1716 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH1717 PF09587 Bacterial capsule synthesis protein PGA_cap CT43_CH1720 PF07690 Major Facilitator Superfamily CT43_CH1721 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CT43_CH1723 PF04397 LytTr DNA-binding domain CT43_CH1723 PF00072 Response regulator receiver domain CT43_CH1724 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CT43_CH1724 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CT43_CH1727 PF01979 Amidohydrolase family CT43_CH1728 PF07690 Major Facilitator Superfamily CT43_CH1729 PF00440 Bacterial regulatory proteins, tetR family CT43_CH1730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH1731 PF13302 Acetyltransferase (GNAT) domain CT43_CH1732 PF00072 Response regulator receiver domain CT43_CH1732 PF00486 Transcriptional regulatory protein, C terminal CT43_CH1733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1733 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1736 PF01566 Natural resistance-associated macrophage protein CT43_CH1739 PF02558 Ketopantoate reductase PanE/ApbA CT43_CH1739 PF08546 Ketopantoate reductase PanE/ApbA C terminal CT43_CH1741 PF13520 Amino acid permease CT43_CH1743 PF05791 Bacillus haemolytic enterotoxin (HBL) CT43_CH1744 PF05791 Bacillus haemolytic enterotoxin (HBL) CT43_CH1745 PF13088 BNR repeat-like domain CT43_CH1745 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase CT43_CH1745 PF00754 F5/8 type C domain CT43_CH1747 PF02073 Thermophilic metalloprotease (M29) CT43_CH1751 PF00583 Acetyltransferase (GNAT) family CT43_CH1752 PF01906 Putative heavy-metal-binding CT43_CH1753 PF02517 CPBP intramembrane metalloprotease CT43_CH1754 PF00440 Bacterial regulatory proteins, tetR family CT43_CH1755 PF04198 Putative sugar-binding domain CT43_CH1756 PF01791 DeoC/LacD family aldolase CT43_CH1757 PF01773 Na+ dependent nucleoside transporter N-terminus CT43_CH1757 PF07662 Na+ dependent nucleoside transporter C-terminus CT43_CH1758 PF02885 Glycosyl transferase family, helical bundle domain CT43_CH1758 PF00591 Glycosyl transferase family, a/b domain CT43_CH1758 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CT43_CH1759 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CT43_CH1760 PF07301 Protein of unknown function (DUF1453) CT43_CH1761 PF05979 Bacterial protein of unknown function (DUF896) CT43_CH1764 PF03466 LysR substrate binding domain CT43_CH1764 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH1767 PF00557 Metallopeptidase family M24 CT43_CH1767 PF05195 Aminopeptidase P, N-terminal domain CT43_CH1769 PF07731 Multicopper oxidase CT43_CH1769 PF07732 Multicopper oxidase CT43_CH1769 PF00394 Multicopper oxidase CT43_CH1774 PF02525 Flavodoxin-like fold CT43_CH1775 PF05525 Branched-chain amino acid transport protein CT43_CH1777 PF13115 YtkA-like CT43_CH1777 PF05425 Copper resistance protein D CT43_CH1777 PF04234 CopC domain CT43_CH1778 PF07987 Domain of unkown function (DUF1775) CT43_CH1780 PF00892 EamA-like transporter family CT43_CH1781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH1781 PF03466 LysR substrate binding domain CT43_CH1782 PF02082 Transcriptional regulator CT43_CH1783 PF01323 DSBA-like thioredoxin domain CT43_CH1784 PF00881 Nitroreductase family CT43_CH1786 PF01425 Amidase CT43_CH1793 PF02371 Transposase IS116/IS110/IS902 family CT43_CH1793 PF01548 Transposase CT43_CH1808 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CT43_CH1808 PF01612 3'-5' exonuclease CT43_CH1808 PF01367 5'-3' exonuclease, C-terminal SAM fold CT43_CH1808 PF00476 DNA polymerase family A CT43_CH1818 PF01555 DNA methylase CT43_CH1827 PF18277 AbrB C-terminal domain CT43_CH1827 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CT43_CH1832 PF18010 Cry35Ab1 HTH C-terminal domain CT43_CH1832 PF00239 Resolvase, N terminal domain CT43_CH1854 PF05105 Bacteriophage holin family CT43_CH1855 PF01510 N-acetylmuramoyl-L-alanine amidase CT43_CH1855 PF12123 N-acetylmuramoyl-l-alanine amidase CT43_CH1868 PF01609 Transposase DDE domain CT43_CH1870 PF01425 Amidase CT43_CH1872 PF01594 AI-2E family transporter CT43_CH1874 PF01594 AI-2E family transporter CT43_CH1875 PF00056 lactate/malate dehydrogenase, NAD binding domain CT43_CH1875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CT43_CH1876 PF01593 Flavin containing amine oxidoreductase CT43_CH1878 PF02492 CobW/HypB/UreG, nucleotide-binding domain CT43_CH1878 PF07683 Cobalamin synthesis protein cobW C-terminal domain CT43_CH1880 PF12399 Branched-chain amino acid ATP-binding cassette transporter CT43_CH1880 PF00005 ABC transporter CT43_CH1881 PF00005 ABC transporter CT43_CH1882 PF02653 Branched-chain amino acid transport system / permease component CT43_CH1884 PF03466 LysR substrate binding domain CT43_CH1884 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH1886 PF14552 Tautomerase enzyme CT43_CH1888 PF01047 MarR family CT43_CH1890 PF01654 Cytochrome bd terminal oxidase subunit I CT43_CH1891 PF02322 Cytochrome bd terminal oxidase subunit II CT43_CH1892 PF00664 ABC transporter transmembrane region CT43_CH1892 PF00005 ABC transporter CT43_CH1893 PF00664 ABC transporter transmembrane region CT43_CH1893 PF00005 ABC transporter CT43_CH1895 PF00535 Glycosyl transferase family 2 CT43_CH1896 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CT43_CH1897 PF00132 Bacterial transferase hexapeptide (six repeats) CT43_CH1902 PF17676 LD-carboxypeptidase C-terminal domain CT43_CH1902 PF02016 LD-carboxypeptidase N-terminal domain CT43_CH1903 PF07943 Penicillin-binding protein 5, C-terminal domain CT43_CH1903 PF00768 D-alanyl-D-alanine carboxypeptidase CT43_CH1907 PF00877 NlpC/P60 family CT43_CH1907 PF01476 LysM domain CT43_CH1909 PF00664 ABC transporter transmembrane region CT43_CH1909 PF00005 ABC transporter CT43_CH1910 PF00072 Response regulator receiver domain CT43_CH1910 PF00486 Transcriptional regulatory protein, C terminal CT43_CH1911 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1911 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1911 PF00989 PAS fold CT43_CH1911 PF16736 Single Cache-like CT43_CH1913 PF00106 short chain dehydrogenase CT43_CH1915 PF04439 Streptomycin adenylyltransferase CT43_CH1916 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CT43_CH1916 PF01522 Polysaccharide deacetylase CT43_CH1921 PF00742 Homoserine dehydrogenase CT43_CH1921 PF01842 ACT domain CT43_CH1921 PF03447 Homoserine dehydrogenase, NAD binding domain CT43_CH1922 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH1923 PF08544 GHMP kinases C terminal CT43_CH1923 PF00288 GHMP kinases N terminal domain CT43_CH1926 PF03816 Cell envelope-related transcriptional attenuator domain CT43_CH1928 PF00072 Response regulator receiver domain CT43_CH1928 PF00486 Transcriptional regulatory protein, C terminal CT43_CH1929 PF00989 PAS fold CT43_CH1929 PF16736 Single Cache-like CT43_CH1929 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH1929 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH1930 PF01522 Polysaccharide deacetylase CT43_CH1932 PF02308 MgtC family CT43_CH1933 PF00583 Acetyltransferase (GNAT) family CT43_CH1934 PF04183 IucA / IucC family CT43_CH1934 PF06276 Ferric iron reductase FhuF-like transporter CT43_CH1935 PF06276 Ferric iron reductase FhuF-like transporter CT43_CH1935 PF04183 IucA / IucC family CT43_CH1936 PF13193 AMP-binding enzyme C-terminal domain CT43_CH1936 PF00501 AMP-binding enzyme CT43_CH1939 PF01261 Xylose isomerase-like TIM barrel CT43_CH1940 PF00269 Small, acid-soluble spore proteins, alpha/beta type CT43_CH1941 PF07690 Major Facilitator Superfamily CT43_CH1942 PF01810 LysE type translocator CT43_CH1943 PF00155 Aminotransferase class I and II CT43_CH1943 PF00392 Bacterial regulatory proteins, gntR family CT43_CH1945 PF01734 Patatin-like phospholipase CT43_CH1950 PF00293 NUDIX domain CT43_CH1950 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH1951 PF02540 NAD synthase CT43_CH1952 PF02687 FtsX-like permease family CT43_CH1953 PF18277 AbrB C-terminal domain CT43_CH1953 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CT43_CH1954 PF00082 Subtilase family CT43_CH1955 PF01022 Bacterial regulatory protein, arsR family CT43_CH1956 PF00248 Aldo/keto reductase family CT43_CH1957 PF07690 Major Facilitator Superfamily CT43_CH1961 PF03193 RsgA GTPase CT43_CH1962 PF02743 Cache domain CT43_CH1962 PF00672 HAMP domain CT43_CH1962 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH1966 PF00210 Ferritin-like domain CT43_CH1969 PF00296 Luciferase-like monooxygenase CT43_CH1971 PF01593 Flavin containing amine oxidoreductase CT43_CH1972 PF13302 Acetyltransferase (GNAT) domain CT43_CH1973 PF00248 Aldo/keto reductase family CT43_CH1974 PF07683 Cobalamin synthesis protein cobW C-terminal domain CT43_CH1974 PF02492 CobW/HypB/UreG, nucleotide-binding domain CT43_CH1975 PF00583 Acetyltransferase (GNAT) family CT43_CH1976 PF01297 Zinc-uptake complex component A periplasmic CT43_CH1978 PF13460 NAD(P)H-binding CT43_CH1979 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CT43_CH1982 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH1983 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH1985 PF00300 Histidine phosphatase superfamily (branch 1) CT43_CH1987 PF08757 CotH kinase protein CT43_CH1988 PF00293 NUDIX domain CT43_CH1989 PF09335 SNARE associated Golgi protein CT43_CH1990 PF14667 Polysaccharide biosynthesis C-terminal domain CT43_CH1990 PF01943 Polysaccharide biosynthesis protein CT43_CH1992 PF03773 Predicted permease CT43_CH1993 PF09323 Domain of unknown function (DUF1980) CT43_CH1994 PF03061 Thioesterase superfamily CT43_CH1995 PF13091 PLD-like domain CT43_CH1995 PF13396 Phospholipase_D-nuclease N-terminal CT43_CH1998 PF13460 NAD(P)H-binding CT43_CH1999 PF04306 Protein of unknown function (DUF456) CT43_CH2000 PF00571 CBS domain CT43_CH2000 PF01595 Cyclin M transmembrane N-terminal domain CT43_CH2000 PF03471 Transporter associated domain CT43_CH2005 PF05525 Branched-chain amino acid transport protein CT43_CH2006 PF01588 Putative tRNA binding domain CT43_CH2009 PF07454 Stage II sporulation protein P (SpoIIP) CT43_CH2011 PF02557 D-alanyl-D-alanine carboxypeptidase CT43_CH2013 PF01425 Amidase CT43_CH2014 PF07690 Major Facilitator Superfamily CT43_CH2016 PF01145 SPFH domain / Band 7 family CT43_CH2017 PF07454 Stage II sporulation protein P (SpoIIP) CT43_CH2020 PF01047 MarR family CT43_CH2021 PF07690 Major Facilitator Superfamily CT43_CH2023 PF01168 Alanine racemase, N-terminal domain CT43_CH2023 PF00842 Alanine racemase, C-terminal domain CT43_CH2027 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CT43_CH2028 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH2028 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH2029 PF00155 Aminotransferase class I and II CT43_CH2029 PF00392 Bacterial regulatory proteins, gntR family CT43_CH2035 PF00583 Acetyltransferase (GNAT) family CT43_CH2045 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CT43_CH2050 PF01209 ubiE/COQ5 methyltransferase family CT43_CH2051 PF01268 Formate--tetrahydrofolate ligase CT43_CH2053 PF00270 DEAD/DEAH box helicase CT43_CH2053 PF00271 Helicase conserved C-terminal domain CT43_CH2054 PF01261 Xylose isomerase-like TIM barrel CT43_CH2055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH2057 PF00107 Zinc-binding dehydrogenase CT43_CH2057 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH2058 PF04542 Sigma-70 region 2 CT43_CH2058 PF08281 Sigma-70, region 4 CT43_CH2061 PF01613 Flavin reductase like domain CT43_CH2061 PF00258 Flavodoxin CT43_CH2063 PF00255 Glutathione peroxidase CT43_CH2064 PF11992 Domain of unknown function (DUF3488) CT43_CH2064 PF13559 Domain of unknown function (DUF4129) CT43_CH2064 PF01841 Transglutaminase-like superfamily CT43_CH2065 PF01882 Protein of unknown function DUF58 CT43_CH2066 PF17863 AAA lid domain CT43_CH2066 PF07726 ATPase family associated with various cellular activities (AAA) CT43_CH2067 PF14710 Respiratory nitrate reductase alpha N-terminal CT43_CH2067 PF00384 Molybdopterin oxidoreductase CT43_CH2067 PF01568 Molydopterin dinucleotide binding domain CT43_CH2068 PF13247 4Fe-4S dicluster domain CT43_CH2068 PF14711 Respiratory nitrate reductase beta C-terminal CT43_CH2069 PF02613 Nitrate reductase delta subunit CT43_CH2070 PF02665 Nitrate reductase gamma subunit CT43_CH2071 PF00027 Cyclic nucleotide-binding domain CT43_CH2071 PF00325 Bacterial regulatory proteins, crp family CT43_CH2072 PF04055 Radical SAM superfamily CT43_CH2072 PF06463 Molybdenum Cofactor Synthesis C CT43_CH2073 PF00899 ThiF family CT43_CH2074 PF03453 MoeA N-terminal region (domain I and II) CT43_CH2074 PF03454 MoeA C-terminal region (domain IV) CT43_CH2074 PF00994 Probable molybdopterin binding domain CT43_CH2075 PF02391 MoaE protein CT43_CH2077 PF07690 Major Facilitator Superfamily CT43_CH2081 PF01903 CbiX CT43_CH2082 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CT43_CH2083 PF00355 Rieske [2Fe-2S] domain CT43_CH2084 PF04324 BFD-like [2Fe-2S] binding domain CT43_CH2084 PF18267 Rubredoxin NAD+ reductase C-terminal domain CT43_CH2084 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH2084 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CT43_CH2084 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CT43_CH2085 PF04405 Domain of Unknown function (DUF542) CT43_CH2085 PF01814 Hemerythrin HHE cation binding domain CT43_CH2092 PF04232 Stage V sporulation protein S (SpoVS) CT43_CH2093 PF18593 CdiI immunity protein CT43_CH2094 PF04740 LXG domain of WXG superfamily CT43_CH2094 PF14436 Bacterial EndoU nuclease CT43_CH2097 PF01966 HD domain CT43_CH2098 PF16326 ABC transporter C-terminal domain CT43_CH2098 PF00005 ABC transporter CT43_CH2098 PF12848 ABC transporter CT43_CH2101 PF00436 Single-strand binding protein family CT43_CH2104 PF08712 Scaffold protein Nfu/NifU N terminal CT43_CH2104 PF13769 Virulence factor CT43_CH2106 PF06491 Disulphide isomerase CT43_CH2107 PF04445 Putative SAM-dependent methyltransferase CT43_CH2108 PF03485 Arginyl tRNA synthetase N terminal domain CT43_CH2108 PF00750 tRNA synthetases class I (R) CT43_CH2108 PF05746 DALR anticodon binding domain CT43_CH2111 PF08264 Anticodon-binding domain of tRNA CT43_CH2111 PF00133 tRNA synthetases class I (I, L, M and V) CT43_CH2116 PF08245 Mur ligase middle domain CT43_CH2116 PF01225 Mur ligase family, catalytic domain CT43_CH2116 PF02875 Mur ligase family, glutamate ligase domain CT43_CH2117 PF00152 tRNA synthetases class II (D, K and N) CT43_CH2117 PF01336 OB-fold nucleic acid binding domain CT43_CH2121 PF12538 DNA transporter CT43_CH2121 PF01580 FtsK/SpoIIIE family CT43_CH2135 PF00209 Sodium:neurotransmitter symporter family CT43_CH2138 PF10997 Alternate to MurJ CT43_CH2139 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH2141 PF00465 Iron-containing alcohol dehydrogenase CT43_CH2142 PF01177 Asp/Glu/Hydantoin racemase CT43_CH2143 PF01980 tRNA-methyltransferase O CT43_CH2144 PF00583 Acetyltransferase (GNAT) family CT43_CH2145 PF11188 Protein of unknown function (DUF2975) CT43_CH2146 PF13443 Cro/C1-type HTH DNA-binding domain CT43_CH2147 PF08645 Polynucleotide kinase 3 phosphatase CT43_CH2149 PF00005 ABC transporter CT43_CH2150 PF05975 Bacterial ABC transporter protein EcsB CT43_CH2151 PF14005 YpjP-like protein CT43_CH2152 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH2155 PF07930 D-aminopeptidase, domain B CT43_CH2155 PF00144 Beta-lactamase CT43_CH2156 PF00303 Thymidylate synthase CT43_CH2157 PF00186 Dihydrofolate reductase CT43_CH2158 PF00905 Penicillin binding protein transpeptidase domain CT43_CH2158 PF03717 Penicillin-binding Protein dimerisation domain CT43_CH2158 PF05223 NTF2-like N-terminal transpeptidase domain CT43_CH2159 PF02525 Flavodoxin-like fold CT43_CH2160 PF01553 Acyltransferase CT43_CH2161 PF03006 Haemolysin-III related CT43_CH2162 PF02416 mttA/Hcf106 family CT43_CH2163 PF00902 Sec-independent protein translocase protein (TatC) CT43_CH2165 PF02645 Uncharacterised protein, DegV family COG1307 CT43_CH2167 PF02630 SCO1/SenC CT43_CH2168 PF00011 Hsp20/alpha crystallin family CT43_CH2169 PF00733 Asparagine synthase CT43_CH2169 PF13537 Glutamine amidotransferase domain CT43_CH2172 PF01520 N-acetylmuramoyl-L-alanine amidase CT43_CH2172 PF05036 Sporulation related domain CT43_CH2173 PF01497 Periplasmic binding protein CT43_CH2174 PF01063 Amino-transferase class IV CT43_CH2175 PF00881 Nitroreductase family CT43_CH2177 PF00857 Isochorismatase family CT43_CH2178 PF00293 NUDIX domain CT43_CH2179 PF00924 Mechanosensitive ion channel CT43_CH2180 PF13185 GAF domain CT43_CH2180 PF07730 Histidine kinase CT43_CH2181 PF00196 Bacterial regulatory proteins, luxR family CT43_CH2181 PF00072 Response regulator receiver domain CT43_CH2182 PF01418 Helix-turn-helix domain, rpiR family CT43_CH2182 PF01380 SIS domain CT43_CH2183 PF02567 Phenazine biosynthesis-like protein CT43_CH2184 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH2184 PF00107 Zinc-binding dehydrogenase CT43_CH2187 PF00665 Integrase core domain CT43_CH2188 PF01695 IstB-like ATP binding protein CT43_CH2189 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT43_CH2189 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT43_CH2190 PF02447 GntP family permease CT43_CH2191 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CT43_CH2191 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CT43_CH2192 PF10924 Protein of unknown function (DUF2711) CT43_CH2195 PF03358 NADPH-dependent FMN reductase CT43_CH2198 PF00571 CBS domain CT43_CH2198 PF00005 ABC transporter CT43_CH2199 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH2200 PF13520 Amino acid permease CT43_CH2206 PF03471 Transporter associated domain CT43_CH2206 PF01595 Cyclin M transmembrane N-terminal domain CT43_CH2206 PF00571 CBS domain CT43_CH2207 PF00171 Aldehyde dehydrogenase family CT43_CH2208 PF07997 Protein of unknown function (DUF1694) CT43_CH2209 PF09385 Histidine kinase N terminal CT43_CH2211 PF00202 Aminotransferase class-III CT43_CH2212 PF01144 Coenzyme A transferase CT43_CH2213 PF01144 Coenzyme A transferase CT43_CH2214 PF07687 Peptidase dimerisation domain CT43_CH2214 PF01546 Peptidase family M20/M25/M40 CT43_CH2215 PF00583 Acetyltransferase (GNAT) family CT43_CH2216 PF13426 PAS domain CT43_CH2216 PF00158 Sigma-54 interaction domain CT43_CH2216 PF02954 Bacterial regulatory protein, Fis family CT43_CH2217 PF12544 Lysine-2,3-aminomutase CT43_CH2218 PF14122 YokU-like protein, putative antitoxin CT43_CH2219 PF06855 YozE SAM-like fold CT43_CH2222 PF14162 YozD-like protein CT43_CH2224 PF08239 Bacterial SH3 domain CT43_CH2224 PF00069 Protein kinase domain CT43_CH2226 PF01569 PAP2 superfamily CT43_CH2227 PF01545 Cation efflux family CT43_CH2227 PF16916 Dimerisation domain of Zinc Transporter CT43_CH2228 PF00085 Thioredoxin CT43_CH2229 PF13302 Acetyltransferase (GNAT) domain CT43_CH2239 PF10676 Spore germination protein gerPA/gerPF CT43_CH2241 PF00106 short chain dehydrogenase CT43_CH2245 PF00905 Penicillin binding protein transpeptidase domain CT43_CH2245 PF00912 Transglycosylase CT43_CH2246 PF07690 Major Facilitator Superfamily CT43_CH2247 PF01521 Iron-sulphur cluster biosynthesis CT43_CH2248 PF00285 Citrate synthase, C-terminal domain CT43_CH2249 PF03972 MmgE/PrpD family CT43_CH2251 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CT43_CH2251 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CT43_CH2251 PF02770 Acyl-CoA dehydrogenase, middle domain CT43_CH2252 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CT43_CH2252 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CT43_CH2253 PF00171 Aldehyde dehydrogenase family CT43_CH2254 PF01810 LysE type translocator CT43_CH2255 PF00378 Enoyl-CoA hydratase/isomerase CT43_CH2258 PF00149 Calcineurin-like phosphoesterase CT43_CH2258 PF12320 Type 5 capsule protein repressor C-terminal domain CT43_CH2259 PF13476 AAA domain CT43_CH2261 PF01022 Bacterial regulatory protein, arsR family CT43_CH2264 PF07690 Major Facilitator Superfamily CT43_CH2265 PF00106 short chain dehydrogenase CT43_CH2266 PF00425 chorismate binding enzyme CT43_CH2267 PF00501 AMP-binding enzyme CT43_CH2267 PF13193 AMP-binding enzyme C-terminal domain CT43_CH2268 PF00857 Isochorismatase family CT43_CH2268 PF00550 Phosphopantetheine attachment site CT43_CH2269 PF00501 AMP-binding enzyme CT43_CH2269 PF00668 Condensation domain CT43_CH2269 PF13193 AMP-binding enzyme C-terminal domain CT43_CH2269 PF00975 Thioesterase domain CT43_CH2269 PF00550 Phosphopantetheine attachment site CT43_CH2270 PF03621 MbtH-like protein CT43_CH2271 PF07690 Major Facilitator Superfamily CT43_CH2274 PF00216 Bacterial DNA-binding protein CT43_CH2276 PF05163 DinB family CT43_CH2277 PF00082 Subtilase family CT43_CH2278 PF01235 Sodium:alanine symporter family CT43_CH2282 PF00849 RNA pseudouridylate synthase CT43_CH2282 PF01479 S4 domain CT43_CH2283 PF02824 TGS domain CT43_CH2283 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CT43_CH2283 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CT43_CH2283 PF03129 Anticodon binding domain CT43_CH2284 PF00005 ABC transporter CT43_CH2286 PF07690 Major Facilitator Superfamily CT43_CH2289 PF00205 Thiamine pyrophosphate enzyme, central domain CT43_CH2289 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CT43_CH2289 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CT43_CH2291 PF00753 Metallo-beta-lactamase superfamily CT43_CH2296 PF00027 Cyclic nucleotide-binding domain CT43_CH2300 PF01047 MarR family CT43_CH2302 PF00753 Metallo-beta-lactamase superfamily CT43_CH2302 PF16123 Hydroxyacylglutathione hydrolase C-terminus CT43_CH2304 PF03176 MMPL family CT43_CH2306 PF00302 Chloramphenicol acetyltransferase CT43_CH2309 PF00583 Acetyltransferase (GNAT) family CT43_CH2316 PF13302 Acetyltransferase (GNAT) domain CT43_CH2318 PF00313 'Cold-shock' DNA-binding domain CT43_CH2322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH2322 PF03466 LysR substrate binding domain CT43_CH2323 PF02774 Semialdehyde dehydrogenase, dimerisation domain CT43_CH2323 PF01118 Semialdehyde dehydrogenase, NAD binding domain CT43_CH2327 PF03466 LysR substrate binding domain CT43_CH2327 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH2328 PF03475 3-alpha domain CT43_CH2328 PF03473 MOSC domain CT43_CH2331 PF00005 ABC transporter CT43_CH2331 PF00664 ABC transporter transmembrane region CT43_CH2332 PF00664 ABC transporter transmembrane region CT43_CH2332 PF00005 ABC transporter CT43_CH2342 PF00589 Phage integrase family CT43_CH2343 PF00561 alpha/beta hydrolase fold CT43_CH2348 PF10668 Phage terminase small subunit CT43_CH2351 PF01510 N-acetylmuramoyl-L-alanine amidase CT43_CH2353 PF04740 LXG domain of WXG superfamily CT43_CH2353 PF14436 Bacterial EndoU nuclease CT43_CH2355 PF01810 LysE type translocator CT43_CH2356 PF07883 Cupin domain CT43_CH2356 PF01381 Helix-turn-helix CT43_CH2362 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH2362 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT43_CH2363 PF04542 Sigma-70 region 2 CT43_CH2363 PF08281 Sigma-70, region 4 CT43_CH2363 PF12680 SnoaL-like domain CT43_CH2368 PF02638 Glycosyl hydrolase-like 10 CT43_CH2370 PF02378 Phosphotransferase system, EIIC CT43_CH2372 PF03702 Anhydro-N-acetylmuramic acid kinase CT43_CH2373 PF01869 BadF/BadG/BcrA/BcrD ATPase family CT43_CH2374 PF02660 Glycerol-3-phosphate acyltransferase CT43_CH2375 PF00266 Aminotransferase class-V CT43_CH2376 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH2377 PF01047 MarR family CT43_CH2378 PF07690 Major Facilitator Superfamily CT43_CH2380 PF00753 Metallo-beta-lactamase superfamily CT43_CH2380 PF16123 Hydroxyacylglutathione hydrolase C-terminus CT43_CH2382 PF00270 DEAD/DEAH box helicase CT43_CH2382 PF00271 Helicase conserved C-terminal domain CT43_CH2385 PF00440 Bacterial regulatory proteins, tetR family CT43_CH2385 PF16925 Tetracyclin repressor-like, C-terminal domain CT43_CH2388 PF03848 Tellurite resistance protein TehB CT43_CH2388 PF09313 Domain of unknown function (DUF1971) CT43_CH2390 PF08241 Methyltransferase domain CT43_CH2391 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CT43_CH2391 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CT43_CH2391 PF00205 Thiamine pyrophosphate enzyme, central domain CT43_CH2392 PF01047 MarR family CT43_CH2393 PF00300 Histidine phosphatase superfamily (branch 1) CT43_CH2394 PF14171 Toxin SpoIISA, type II toxin-antitoxin system CT43_CH2399 PF01546 Peptidase family M20/M25/M40 CT43_CH2399 PF07687 Peptidase dimerisation domain CT43_CH2402 PF04371 Porphyromonas-type peptidyl-arginine deiminase CT43_CH2403 PF00196 Bacterial regulatory proteins, luxR family CT43_CH2403 PF00072 Response regulator receiver domain CT43_CH2405 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CT43_CH2405 PF18277 AbrB C-terminal domain CT43_CH2407 PF01925 Sulfite exporter TauE/SafE CT43_CH2408 PF00132 Bacterial transferase hexapeptide (six repeats) CT43_CH2409 PF07943 Penicillin-binding protein 5, C-terminal domain CT43_CH2409 PF00768 D-alanyl-D-alanine carboxypeptidase CT43_CH2412 PF07690 Major Facilitator Superfamily CT43_CH2413 PF00668 Condensation domain CT43_CH2413 PF00550 Phosphopantetheine attachment site CT43_CH2413 PF13193 AMP-binding enzyme C-terminal domain CT43_CH2413 PF00501 AMP-binding enzyme CT43_CH2414 PF00550 Phosphopantetheine attachment site CT43_CH2414 PF07993 Male sterility protein CT43_CH2414 PF00668 Condensation domain CT43_CH2414 PF00501 AMP-binding enzyme CT43_CH2414 PF13193 AMP-binding enzyme C-terminal domain CT43_CH2415 PF00550 Phosphopantetheine attachment site CT43_CH2415 PF00501 AMP-binding enzyme CT43_CH2415 PF13193 AMP-binding enzyme C-terminal domain CT43_CH2415 PF00668 Condensation domain CT43_CH2416 PF01648 4'-phosphopantetheinyl transferase superfamily CT43_CH2417 PF00975 Thioesterase domain CT43_CH2420 PF01235 Sodium:alanine symporter family CT43_CH2421 PF04960 Glutaminase CT43_CH2422 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH2423 PF08664 YcbB domain CT43_CH2423 PF00072 Response regulator receiver domain CT43_CH2425 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH2426 PF03845 Spore germination protein CT43_CH2427 PF05504 Spore germination B3/ GerAC like, C-terminal CT43_CH2428 PF03807 NADP oxidoreductase coenzyme F420-dependent CT43_CH2428 PF14748 Pyrroline-5-carboxylate reductase dimerisation CT43_CH2429 PF13520 Amino acid permease CT43_CH2430 PF01541 GIY-YIG catalytic domain CT43_CH2430 PF12826 Helix-hairpin-helix motif CT43_CH2430 PF02151 UvrB/uvrC motif CT43_CH2430 PF08459 UvrC Helix-hairpin-helix N-terminal CT43_CH2432 PF12833 Helix-turn-helix domain CT43_CH2432 PF17853 GGDEF-like domain CT43_CH2435 PF05791 Bacillus haemolytic enterotoxin (HBL) CT43_CH2436 PF05791 Bacillus haemolytic enterotoxin (HBL) CT43_CH2437 PF13188 PAS domain CT43_CH2437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH2437 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH2437 PF00989 PAS fold CT43_CH2437 PF13426 PAS domain CT43_CH2438 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH2439 PF08386 TAP-like protein CT43_CH2439 PF00561 alpha/beta hydrolase fold CT43_CH2441 PF00269 Small, acid-soluble spore proteins, alpha/beta type CT43_CH2449 PF01734 Patatin-like phospholipase CT43_CH2449 PF00027 Cyclic nucleotide-binding domain CT43_CH2451 PF02371 Transposase IS116/IS110/IS902 family CT43_CH2451 PF01548 Transposase CT43_CH2453 PF05223 NTF2-like N-terminal transpeptidase domain CT43_CH2453 PF03717 Penicillin-binding Protein dimerisation domain CT43_CH2453 PF00905 Penicillin binding protein transpeptidase domain CT43_CH2454 PF08281 Sigma-70, region 4 CT43_CH2454 PF04542 Sigma-70 region 2 CT43_CH2456 PF00905 Penicillin binding protein transpeptidase domain CT43_CH2456 PF03717 Penicillin-binding Protein dimerisation domain CT43_CH2460 PF00149 Calcineurin-like phosphoesterase CT43_CH2462 PF00005 ABC transporter CT43_CH2464 PF00440 Bacterial regulatory proteins, tetR family CT43_CH2464 PF08359 YsiA-like protein, C-terminal region CT43_CH2467 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CT43_CH2467 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CT43_CH2467 PF02770 Acyl-CoA dehydrogenase, middle domain CT43_CH2468 PF02785 Biotin carboxylase C-terminal domain CT43_CH2468 PF00289 Biotin carboxylase, N-terminal domain CT43_CH2468 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CT43_CH2469 PF00364 Biotin-requiring enzyme CT43_CH2470 PF00682 HMGL-like CT43_CH2471 PF00378 Enoyl-CoA hydratase/isomerase CT43_CH2472 PF01039 Carboxyl transferase domain CT43_CH2473 PF16177 Acetyl-coenzyme A synthetase N-terminus CT43_CH2473 PF00501 AMP-binding enzyme CT43_CH2473 PF13193 AMP-binding enzyme C-terminal domain CT43_CH2476 PF01548 Transposase CT43_CH2476 PF02371 Transposase IS116/IS110/IS902 family CT43_CH2482 PF07943 Penicillin-binding protein 5, C-terminal domain CT43_CH2482 PF00768 D-alanyl-D-alanine carboxypeptidase CT43_CH2483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH2483 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH2484 PF00486 Transcriptional regulatory protein, C terminal CT43_CH2484 PF00072 Response regulator receiver domain CT43_CH2485 PF01966 HD domain CT43_CH2486 PF13021 Domain of unknown function (DUF3885) CT43_CH2487 PF01048 Phosphorylase superfamily CT43_CH2490 PF03413 Peptidase propeptide and YPEB domain CT43_CH2490 PF07504 Fungalysin/Thermolysin Propeptide Motif CT43_CH2490 PF02868 Thermolysin metallopeptidase, alpha-helical domain CT43_CH2490 PF01447 Thermolysin metallopeptidase, catalytic domain CT43_CH2491 PF17853 GGDEF-like domain CT43_CH2491 PF12833 Helix-turn-helix domain CT43_CH2494 PF17802 Prealbumin-like fold domain CT43_CH2494 PF18002 T6 antigen Ig like domain CT43_CH2494 PF00746 LPXTG cell wall anchor motif CT43_CH2494 PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain CT43_CH2497 PF17755 UvrA DNA-binding domain CT43_CH2497 PF17760 UvrA interaction domain CT43_CH2497 PF00005 ABC transporter CT43_CH2498 PF09278 MerR, DNA binding CT43_CH2498 PF00376 MerR family regulatory protein CT43_CH2501 PF00665 Integrase core domain CT43_CH2502 PF01695 IstB-like ATP binding protein CT43_CH2503 PF01638 HxlR-like helix-turn-helix CT43_CH2507 PF01636 Phosphotransferase enzyme family CT43_CH2508 PF12833 Helix-turn-helix domain CT43_CH2511 PF00392 Bacterial regulatory proteins, gntR family CT43_CH2511 PF00155 Aminotransferase class I and II CT43_CH2513 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CT43_CH2513 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CT43_CH2516 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH2516 PF00107 Zinc-binding dehydrogenase CT43_CH2518 PF04239 Protein of unknown function (DUF421) CT43_CH2519 PF08241 Methyltransferase domain CT43_CH2520 PF01965 DJ-1/PfpI family CT43_CH2522 PF08450 SMP-30/Gluconolactonase/LRE-like region CT43_CH2524 PF01921 tRNA synthetases class I (K) CT43_CH2525 PF07486 Cell Wall Hydrolase CT43_CH2527 PF00486 Transcriptional regulatory protein, C terminal CT43_CH2527 PF00072 Response regulator receiver domain CT43_CH2528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH2533 PF00005 ABC transporter CT43_CH2534 PF02687 FtsX-like permease family CT43_CH2538 PF01842 ACT domain CT43_CH2538 PF03447 Homoserine dehydrogenase, NAD binding domain CT43_CH2538 PF00742 Homoserine dehydrogenase CT43_CH2539 PF00155 Aminotransferase class I and II CT43_CH2539 PF00392 Bacterial regulatory proteins, gntR family CT43_CH2540 PF07478 D-ala D-ala ligase C-terminus CT43_CH2540 PF01820 D-ala D-ala ligase N-terminus CT43_CH2541 PF03070 TENA/THI-4/PQQC family CT43_CH2547 PF14659 Phage integrase, N-terminal SAM-like domain CT43_CH2547 PF00589 Phage integrase family CT43_CH2558 PF01695 IstB-like ATP binding protein CT43_CH2558 PF07319 Primosomal protein DnaI N-terminus CT43_CH2562 PF18277 AbrB C-terminal domain CT43_CH2562 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CT43_CH2563 PF01609 Transposase DDE domain CT43_CH2577 PF00589 Phage integrase family CT43_CH2582 PF10668 Phage terminase small subunit CT43_CH2585 PF00574 Clp protease CT43_CH2597 PF02371 Transposase IS116/IS110/IS902 family CT43_CH2597 PF01548 Transposase CT43_CH2599 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CT43_CH2599 PF13457 GW (Gly-Tryp) dipeptide domain CT43_CH2610 PF00067 Cytochrome P450 CT43_CH2612 PF00132 Bacterial transferase hexapeptide (six repeats) CT43_CH2613 PF07561 Domain of Unknown Function (DUF1540) CT43_CH2615 PF00067 Cytochrome P450 CT43_CH2618 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH2618 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH2618 PF13426 PAS domain CT43_CH2618 PF13188 PAS domain CT43_CH2618 PF00989 PAS fold CT43_CH2620 PF10502 Signal peptidase, peptidase S26 CT43_CH2621 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CT43_CH2622 PF01177 Asp/Glu/Hydantoin racemase CT43_CH2623 PF07155 ECF-type riboflavin transporter, S component CT43_CH2624 PF00005 ABC transporter CT43_CH2624 PF12558 ATP-binding cassette cobalt transporter CT43_CH2626 PF09680 Family of unknown function CT43_CH2627 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH2627 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH2635 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH2635 PF00293 NUDIX domain CT43_CH2639 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH2639 PF00107 Zinc-binding dehydrogenase CT43_CH2640 PF01569 PAP2 superfamily CT43_CH2652 PF13411 MerR HTH family regulatory protein CT43_CH2652 PF07739 TipAS antibiotic-recognition domain CT43_CH2656 PF03009 Glycerophosphoryl diester phosphodiesterase family CT43_CH2660 PF00392 Bacterial regulatory proteins, gntR family CT43_CH2660 PF00155 Aminotransferase class I and II CT43_CH2661 PF00892 EamA-like transporter family CT43_CH2662 PF01270 Glycosyl hydrolases family 8 CT43_CH2663 PF01156 Inosine-uridine preferring nucleoside hydrolase CT43_CH2666 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH2666 PF00293 NUDIX domain CT43_CH2670 PF07690 Major Facilitator Superfamily CT43_CH2672 PF09297 NADH pyrophosphatase zinc ribbon domain CT43_CH2672 PF00293 NUDIX domain CT43_CH2673 PF02767 DNA polymerase III beta subunit, central domain CT43_CH2673 PF00712 DNA polymerase III beta subunit, N-terminal domain CT43_CH2673 PF02768 DNA polymerase III beta subunit, C-terminal domain CT43_CH2675 PF12706 Beta-lactamase superfamily domain CT43_CH2679 PF09234 Domain of unknown function (DUF1963) CT43_CH2683 PF01734 Patatin-like phospholipase CT43_CH2684 PF08000 Bacterial PH domain CT43_CH2686 PF12867 DinB superfamily CT43_CH2689 PF02673 Bacitracin resistance protein BacA CT43_CH2691 PF01541 GIY-YIG catalytic domain CT43_CH2699 PF01266 FAD dependent oxidoreductase CT43_CH2706 PF00072 Response regulator receiver domain CT43_CH2706 PF00486 Transcriptional regulatory protein, C terminal CT43_CH2707 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH2707 PF00989 PAS fold CT43_CH2707 PF16736 Single Cache-like CT43_CH2707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH2709 PF01037 Lrp/AsnC ligand binding domain CT43_CH2712 PF00005 ABC transporter CT43_CH2713 PF02687 FtsX-like permease family CT43_CH2713 PF12704 MacB-like periplasmic core domain CT43_CH2715 PF07859 alpha/beta hydrolase fold CT43_CH2716 PF00282 Pyridoxal-dependent decarboxylase conserved domain CT43_CH2717 PF00668 Condensation domain CT43_CH2717 PF13193 AMP-binding enzyme C-terminal domain CT43_CH2717 PF00501 AMP-binding enzyme CT43_CH2717 PF00550 Phosphopantetheine attachment site CT43_CH2719 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CT43_CH2719 PF03714 Bacterial pullanase-associated domain CT43_CH2719 PF00128 Alpha amylase, catalytic domain CT43_CH2720 PF03413 Peptidase propeptide and YPEB domain CT43_CH2720 PF07504 Fungalysin/Thermolysin Propeptide Motif CT43_CH2720 PF02868 Thermolysin metallopeptidase, alpha-helical domain CT43_CH2720 PF01447 Thermolysin metallopeptidase, catalytic domain CT43_CH2721 PF00149 Calcineurin-like phosphoesterase CT43_CH2721 PF02872 5'-nucleotidase, C-terminal domain CT43_CH2725 PF00344 SecY translocase CT43_CH2726 PF02909 Tetracyclin repressor-like, C-terminal domain CT43_CH2726 PF00440 Bacterial regulatory proteins, tetR family CT43_CH2727 PF01494 FAD binding domain CT43_CH2728 PF00892 EamA-like transporter family CT43_CH2729 PF00392 Bacterial regulatory proteins, gntR family CT43_CH2729 PF00155 Aminotransferase class I and II CT43_CH2730 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH2730 PF00107 Zinc-binding dehydrogenase CT43_CH2731 PF00561 alpha/beta hydrolase fold CT43_CH2736 PF06081 Aromatic acid exporter family member 1 CT43_CH2739 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CT43_CH2741 PF01471 Putative peptidoglycan binding domain CT43_CH2741 PF07486 Cell Wall Hydrolase CT43_CH2745 PF03301 Tryptophan 2,3-dioxygenase CT43_CH2746 PF04199 Putative cyclase CT43_CH2747 PF00266 Aminotransferase class-V CT43_CH2748 PF08359 YsiA-like protein, C-terminal region CT43_CH2748 PF00440 Bacterial regulatory proteins, tetR family CT43_CH2749 PF00293 NUDIX domain CT43_CH2753 PF02954 Bacterial regulatory protein, Fis family CT43_CH2753 PF01590 GAF domain CT43_CH2753 PF00158 Sigma-54 interaction domain CT43_CH2756 PF13302 Acetyltransferase (GNAT) domain CT43_CH2757 PF00455 DeoR C terminal sensor domain CT43_CH2757 PF08220 DeoR-like helix-turn-helix domain CT43_CH2760 PF02082 Transcriptional regulator CT43_CH2763 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT43_CH2763 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH2764 PF00364 Biotin-requiring enzyme CT43_CH2764 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CT43_CH2764 PF02817 e3 binding domain CT43_CH2765 PF02780 Transketolase, C-terminal domain CT43_CH2765 PF02779 Transketolase, pyrimidine binding domain CT43_CH2766 PF00676 Dehydrogenase E1 component CT43_CH2769 PF00106 short chain dehydrogenase CT43_CH2770 PF04229 GrpB protein CT43_CH2770 PF13673 Acetyltransferase (GNAT) domain CT43_CH2778 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH2779 PF00005 ABC transporter CT43_CH2779 PF00571 CBS domain CT43_CH2780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CT43_CH2781 PF00574 Clp protease CT43_CH2784 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CT43_CH2785 PF13673 Acetyltransferase (GNAT) domain CT43_CH2786 PF18416 N-acetylglucosamine binding protein domain 2 CT43_CH2786 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CT43_CH2787 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CT43_CH2788 PF03781 Sulfatase-modifying factor enzyme 1 CT43_CH2790 PF10990 Protein of unknown function (DUF2809) CT43_CH2792 PF04237 YjbR CT43_CH2803 PF00583 Acetyltransferase (GNAT) family CT43_CH2804 PF13538 UvrD-like helicase C-terminal domain CT43_CH2806 PF13276 HTH-like domain CT43_CH2806 PF13333 Integrase core domain CT43_CH2806 PF00665 Integrase core domain CT43_CH2811 PF00270 DEAD/DEAH box helicase CT43_CH2811 PF00271 Helicase conserved C-terminal domain CT43_CH2811 PF09382 RQC domain CT43_CH2811 PF00570 HRDC domain CT43_CH2811 PF16124 RecQ zinc-binding CT43_CH2819 PF01368 DHH family CT43_CH2819 PF02833 DHHA2 domain CT43_CH2820 PF18416 N-acetylglucosamine binding protein domain 2 CT43_CH2820 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CT43_CH2823 PF02627 Carboxymuconolactone decarboxylase family CT43_CH2824 PF01235 Sodium:alanine symporter family CT43_CH2825 PF00171 Aldehyde dehydrogenase family CT43_CH2826 PF00701 Dihydrodipicolinate synthetase family CT43_CH2827 PF05544 Proline racemase CT43_CH2828 PF05544 Proline racemase CT43_CH2829 PF01266 FAD dependent oxidoreductase CT43_CH2830 PF02954 Bacterial regulatory protein, Fis family CT43_CH2830 PF13188 PAS domain CT43_CH2830 PF00158 Sigma-54 interaction domain CT43_CH2831 PF04324 BFD-like [2Fe-2S] binding domain CT43_CH2831 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH2833 PF04324 BFD-like [2Fe-2S] binding domain CT43_CH2833 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH2836 PF08876 Domain of unknown function (DUF1836) CT43_CH2838 PF01966 HD domain CT43_CH2839 PF09335 SNARE associated Golgi protein CT43_CH2841 PF04914 DltD protein CT43_CH2843 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH2844 PF00877 NlpC/P60 family CT43_CH2844 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CT43_CH2845 PF13378 Enolase C-terminal domain-like CT43_CH2845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CT43_CH2848 PF00248 Aldo/keto reductase family CT43_CH2854 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CT43_CH2854 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CT43_CH2856 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH2856 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH2856 PF00672 HAMP domain CT43_CH2857 PF00072 Response regulator receiver domain CT43_CH2857 PF00486 Transcriptional regulatory protein, C terminal CT43_CH2860 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH2861 PF01048 Phosphorylase superfamily CT43_CH2863 PF03808 Glycosyl transferase WecB/TagA/CpsF family CT43_CH2864 PF08439 Oligopeptidase F CT43_CH2864 PF01432 Peptidase family M3 CT43_CH2865 PF02645 Uncharacterised protein, DegV family COG1307 CT43_CH2870 PF07690 Major Facilitator Superfamily CT43_CH2872 PF04519 Polymer-forming cytoskeletal CT43_CH2873 PF13171 Protein of unknown function (DUF4004) CT43_CH2874 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH2874 PF12793 Sugar transport-related sRNA regulator N-term CT43_CH2875 PF07690 Major Facilitator Superfamily CT43_CH2881 PF04226 Transglycosylase associated protein CT43_CH2884 PF08241 Methyltransferase domain CT43_CH2892 PF00155 Aminotransferase class I and II CT43_CH2893 PF07977 FabA-like domain CT43_CH2894 PF03630 Fumble CT43_CH2898 PF00005 ABC transporter CT43_CH2906 PF01594 AI-2E family transporter CT43_CH2908 PF00296 Luciferase-like monooxygenase CT43_CH2909 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH2910 PF09084 NMT1/THI5 like CT43_CH2911 PF00005 ABC transporter CT43_CH2918 PF02522 Aminoglycoside 3-N-acetyltransferase CT43_CH2920 PF13536 Putative multidrug resistance efflux transporter CT43_CH2922 PF12867 DinB superfamily CT43_CH2926 PF08713 DNA alkylation repair enzyme CT43_CH2928 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH2929 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH2930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH2932 PF01965 DJ-1/PfpI family CT43_CH2933 PF01522 Polysaccharide deacetylase CT43_CH2935 PF03741 Integral membrane protein TerC family CT43_CH2936 PF00884 Sulfatase CT43_CH2937 PF12848 ABC transporter CT43_CH2937 PF00005 ABC transporter CT43_CH2938 PF03176 MMPL family CT43_CH2939 PF16295 Tetracyclin repressor-like, C-terminal domain CT43_CH2939 PF00440 Bacterial regulatory proteins, tetR family CT43_CH2941 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CT43_CH2942 PF01842 ACT domain CT43_CH2942 PF02153 Prephenate dehydrogenase CT43_CH2943 PF00155 Aminotransferase class I and II CT43_CH2944 PF01264 Chorismate synthase CT43_CH2945 PF00793 DAHP synthetase I family CT43_CH2945 PF01817 Chorismate mutase type II CT43_CH2949 PF01636 Phosphotransferase enzyme family CT43_CH2954 PF01476 LysM domain CT43_CH2954 PF06725 3D domain CT43_CH2956 PF08031 Berberine and berberine like CT43_CH2956 PF01565 FAD binding domain CT43_CH2960 PF06039 Malate:quinone oxidoreductase (Mqo) CT43_CH2961 PF13407 Periplasmic binding protein domain CT43_CH2962 PF02653 Branched-chain amino acid transport system / permease component CT43_CH2963 PF02653 Branched-chain amino acid transport system / permease component CT43_CH2964 PF00005 ABC transporter CT43_CH2965 PF04198 Putative sugar-binding domain CT43_CH2965 PF00325 Bacterial regulatory proteins, crp family CT43_CH2966 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT43_CH2966 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT43_CH2968 PF01791 DeoC/LacD family aldolase CT43_CH2970 PF03992 Antibiotic biosynthesis monooxygenase CT43_CH2972 PF01022 Bacterial regulatory protein, arsR family CT43_CH2973 PF01773 Na+ dependent nucleoside transporter N-terminus CT43_CH2973 PF07662 Na+ dependent nucleoside transporter C-terminus CT43_CH2974 PF00171 Aldehyde dehydrogenase family CT43_CH2975 PF01472 PUA domain CT43_CH2975 PF00696 Amino acid kinase family CT43_CH2976 PF03807 NADP oxidoreductase coenzyme F420-dependent CT43_CH2976 PF14748 Pyrroline-5-carboxylate reductase dimerisation CT43_CH2977 PF01546 Peptidase family M20/M25/M40 CT43_CH2978 PF09339 IclR helix-turn-helix domain CT43_CH2978 PF01614 Bacterial transcriptional regulator CT43_CH2979 PF00324 Amino acid permease CT43_CH2983 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CT43_CH2984 PF01609 Transposase DDE domain CT43_CH2985 PF00487 Fatty acid desaturase CT43_CH2986 PF05547 Immune inhibitor A peptidase M6 CT43_CH2987 PF04294 VanW like protein CT43_CH2988 PF00245 Alkaline phosphatase CT43_CH2989 PF11188 Protein of unknown function (DUF2975) CT43_CH2990 PF13443 Cro/C1-type HTH DNA-binding domain CT43_CH2994 PF13302 Acetyltransferase (GNAT) domain CT43_CH2995 PF12681 Glyoxalase-like domain CT43_CH3001 PF17863 AAA lid domain CT43_CH3001 PF07726 ATPase family associated with various cellular activities (AAA) CT43_CH3004 PF07690 Major Facilitator Superfamily CT43_CH3005 PF00202 Aminotransferase class-III CT43_CH3006 PF00199 Catalase CT43_CH3006 PF06628 Catalase-related immune-responsive CT43_CH3007 PF01752 Collagenase CT43_CH3007 PF08453 Peptidase family M9 N-terminal CT43_CH3007 PF04151 Bacterial pre-peptidase C-terminal domain CT43_CH3007 PF18496 Collagenase G catalytic helper subdomain CT43_CH3009 PF13382 Adenine deaminase C-terminal domain CT43_CH3009 PF01979 Amidohydrolase family CT43_CH3010 PF00144 Beta-lactamase CT43_CH3013 PF00881 Nitroreductase family CT43_CH3014 PF01047 MarR family CT43_CH3015 PF03764 Elongation factor G, domain IV CT43_CH3015 PF00679 Elongation factor G C-terminus CT43_CH3015 PF14492 Elongation Factor G, domain II CT43_CH3015 PF00009 Elongation factor Tu GTP binding domain CT43_CH3018 PF05406 WGR domain CT43_CH3019 PF16363 GDP-mannose 4,6 dehydratase CT43_CH3020 PF01695 IstB-like ATP binding protein CT43_CH3021 PF00665 Integrase core domain CT43_CH3024 PF12833 Helix-turn-helix domain CT43_CH3025 PF00583 Acetyltransferase (GNAT) family CT43_CH3029 PF00892 EamA-like transporter family CT43_CH3030 PF00392 Bacterial regulatory proteins, gntR family CT43_CH3030 PF00155 Aminotransferase class I and II CT43_CH3031 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CT43_CH3032 PF13031 Protein of unknown function (DUF3892) CT43_CH3039 PF01925 Sulfite exporter TauE/SafE CT43_CH3041 PF00324 Amino acid permease CT43_CH3043 PF08713 DNA alkylation repair enzyme CT43_CH3045 PF00989 PAS fold CT43_CH3045 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH3045 PF18698 Histidine kinase sensor domain CT43_CH3045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH3045 PF00672 HAMP domain CT43_CH3046 PF00072 Response regulator receiver domain CT43_CH3046 PF00486 Transcriptional regulatory protein, C terminal CT43_CH3048 PF02687 FtsX-like permease family CT43_CH3048 PF00005 ABC transporter CT43_CH3048 PF12704 MacB-like periplasmic core domain CT43_CH3051 PF00293 NUDIX domain CT43_CH3052 PF04989 Cephalosporin hydroxylase CT43_CH3053 PF10502 Signal peptidase, peptidase S26 CT43_CH3055 PF02146 Sir2 family CT43_CH3056 PF01470 Pyroglutamyl peptidase CT43_CH3059 PF03746 LamB/YcsF family CT43_CH3060 PF02626 Carboxyltransferase domain, subdomain A and B CT43_CH3061 PF02682 Carboxyltransferase domain, subdomain C and D CT43_CH3062 PF01614 Bacterial transcriptional regulator CT43_CH3062 PF09339 IclR helix-turn-helix domain CT43_CH3064 PF10502 Signal peptidase, peptidase S26 CT43_CH3065 PF03932 CutC family CT43_CH3068 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CT43_CH3068 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CT43_CH3068 PF02770 Acyl-CoA dehydrogenase, middle domain CT43_CH3075 PF10903 Protein of unknown function (DUF2691) CT43_CH3076 PF02915 Rubrerythrin CT43_CH3079 PF00440 Bacterial regulatory proteins, tetR family CT43_CH3080 PF05547 Immune inhibitor A peptidase M6 CT43_CH3081 PF00144 Beta-lactamase CT43_CH3083 PF02872 5'-nucleotidase, C-terminal domain CT43_CH3083 PF17936 Bacterial Ig domain CT43_CH3083 PF00149 Calcineurin-like phosphoesterase CT43_CH3084 PF00561 alpha/beta hydrolase fold CT43_CH3085 PF00857 Isochorismatase family CT43_CH3089 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH3089 PF03466 LysR substrate binding domain CT43_CH3090 PF01047 MarR family CT43_CH3091 PF01544 CorA-like Mg2+ transporter protein CT43_CH3099 PF03845 Spore germination protein CT43_CH3103 PF03073 TspO/MBR family CT43_CH3104 PF00875 DNA photolyase CT43_CH3104 PF03441 FAD binding domain of DNA photolyase CT43_CH3106 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CT43_CH3107 PF00361 Proton-conducting membrane transporter CT43_CH3107 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CT43_CH3108 PF10057 Uncharacterized conserved protein (DUF2294) CT43_CH3109 PF01522 Polysaccharide deacetylase CT43_CH3111 PF01040 UbiA prenyltransferase family CT43_CH3112 PF01451 Low molecular weight phosphotyrosine protein phosphatase CT43_CH3113 PF01758 Sodium Bile acid symporter family CT43_CH3114 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH3115 PF01022 Bacterial regulatory protein, arsR family CT43_CH3117 PF01872 RibD C-terminal domain CT43_CH3118 PF07993 Male sterility protein CT43_CH3118 PF00550 Phosphopantetheine attachment site CT43_CH3119 PF18665 Tetracyclin repressor-like, C-terminal domain CT43_CH3119 PF00440 Bacterial regulatory proteins, tetR family CT43_CH3127 PF01609 Transposase DDE domain CT43_CH3128 PF07690 Major Facilitator Superfamily CT43_CH3129 PF00440 Bacterial regulatory proteins, tetR family CT43_CH3131 PF01037 Lrp/AsnC ligand binding domain CT43_CH3134 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH3138 PF00144 Beta-lactamase CT43_CH3139 PF00144 Beta-lactamase CT43_CH3140 PF08803 Putative mono-oxygenase ydhR CT43_CH3142 PF12802 MarR family CT43_CH3145 PF01548 Transposase CT43_CH3145 PF02371 Transposase IS116/IS110/IS902 family CT43_CH3148 PF00072 Response regulator receiver domain CT43_CH3148 PF00486 Transcriptional regulatory protein, C terminal CT43_CH3149 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH3149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH3149 PF00672 HAMP domain CT43_CH3155 PF00072 Response regulator receiver domain CT43_CH3155 PF00196 Bacterial regulatory proteins, luxR family CT43_CH3157 PF00005 ABC transporter CT43_CH3158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH3158 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH3159 PF00072 Response regulator receiver domain CT43_CH3159 PF00486 Transcriptional regulatory protein, C terminal CT43_CH3164 PF00175 Oxidoreductase NAD-binding domain CT43_CH3164 PF00067 Cytochrome P450 CT43_CH3164 PF00667 FAD binding domain CT43_CH3164 PF00258 Flavodoxin CT43_CH3165 PF07690 Major Facilitator Superfamily CT43_CH3168 PF00326 Prolyl oligopeptidase family CT43_CH3170 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH3173 PF02073 Thermophilic metalloprotease (M29) CT43_CH3175 PF01139 tRNA-splicing ligase RtcB CT43_CH3177 PF04072 Leucine carboxyl methyltransferase CT43_CH3180 PF01565 FAD binding domain CT43_CH3180 PF08031 Berberine and berberine like CT43_CH3181 PF00005 ABC transporter CT43_CH3182 PF02687 FtsX-like permease family CT43_CH3186 PF00672 HAMP domain CT43_CH3186 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH3186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH3187 PF00486 Transcriptional regulatory protein, C terminal CT43_CH3187 PF00072 Response regulator receiver domain CT43_CH3188 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH3188 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH3191 PF17676 LD-carboxypeptidase C-terminal domain CT43_CH3191 PF02016 LD-carboxypeptidase N-terminal domain CT43_CH3195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CT43_CH3195 PF01842 ACT domain CT43_CH3195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CT43_CH3196 PF00266 Aminotransferase class-V CT43_CH3199 PF07883 Cupin domain CT43_CH3200 PF12833 Helix-turn-helix domain CT43_CH3200 PF01497 Periplasmic binding protein CT43_CH3202 PF01804 Penicillin amidase CT43_CH3204 PF01471 Putative peptidoglycan binding domain CT43_CH3204 PF01476 LysM domain CT43_CH3204 PF01510 N-acetylmuramoyl-L-alanine amidase CT43_CH3208 PF02557 D-alanyl-D-alanine carboxypeptidase CT43_CH3209 PF09587 Bacterial capsule synthesis protein PGA_cap CT43_CH3210 PF14044 NETI protein CT43_CH3211 PF07690 Major Facilitator Superfamily CT43_CH3213 PF12697 Alpha/beta hydrolase family CT43_CH3214 PF01047 MarR family CT43_CH3215 PF07690 Major Facilitator Superfamily CT43_CH3218 PF00144 Beta-lactamase CT43_CH3219 PF17440 Thiol-activated cytolysin beta sandwich domain CT43_CH3219 PF01289 Thiol-activated cytolysin CT43_CH3220 PF02667 Short chain fatty acid transporter CT43_CH3222 PF02525 Flavodoxin-like fold CT43_CH3226 PF14256 YwiC-like protein CT43_CH3228 PF00005 ABC transporter CT43_CH3232 PF03737 Aldolase/RraA CT43_CH3233 PF03606 C4-dicarboxylate anaerobic carrier CT43_CH3234 PF04231 Endonuclease I CT43_CH3236 PF01048 Phosphorylase superfamily CT43_CH3238 PF01381 Helix-turn-helix CT43_CH3240 PF04073 Aminoacyl-tRNA editing domain CT43_CH3241 PF13393 Histidyl-tRNA synthetase CT43_CH3241 PF03129 Anticodon binding domain CT43_CH3244 PF01638 HxlR-like helix-turn-helix CT43_CH3245 PF00881 Nitroreductase family CT43_CH3247 PF00391 PEP-utilising enzyme, mobile domain CT43_CH3247 PF00224 Pyruvate kinase, barrel domain CT43_CH3247 PF02887 Pyruvate kinase, alpha/beta domain CT43_CH3253 PF00005 ABC transporter CT43_CH3258 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH3263 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH3263 PF00293 NUDIX domain CT43_CH3265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH3266 PF00480 ROK family CT43_CH3268 PF14602 Hexapeptide repeat of succinyl-transferase CT43_CH3268 PF12464 Maltose acetyltransferase CT43_CH3269 PF00579 tRNA synthetases class I (W and Y) CT43_CH3270 PF13288 DXP reductoisomerase C-terminal domain CT43_CH3270 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CT43_CH3270 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CT43_CH3271 PF01594 AI-2E family transporter CT43_CH3272 PF01594 AI-2E family transporter CT43_CH3278 PF08003 Protein of unknown function (DUF1698) CT43_CH3280 PF07690 Major Facilitator Superfamily CT43_CH3283 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH3285 PF01595 Cyclin M transmembrane N-terminal domain CT43_CH3285 PF00571 CBS domain CT43_CH3285 PF03471 Transporter associated domain CT43_CH3286 PF13411 MerR HTH family regulatory protein CT43_CH3288 PF00483 Nucleotidyl transferase CT43_CH3289 PF16363 GDP-mannose 4,6 dehydratase CT43_CH3290 PF08484 C-methyltransferase C-terminal domain CT43_CH3290 PF08421 Putative zinc binding domain CT43_CH3291 PF01370 NAD dependent epimerase/dehydratase family CT43_CH3294 PF00892 EamA-like transporter family CT43_CH3296 PF00805 Pentapeptide repeats (8 copies) CT43_CH3297 PF06906 Protein of unknown function (DUF1272) CT43_CH3298 PF10282 Lactonase, 7-bladed beta-propeller CT43_CH3299 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT43_CH3299 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT43_CH3300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT43_CH3300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT43_CH3301 PF02447 GntP family permease CT43_CH3302 PF00923 Transaldolase/Fructose-6-phosphate aldolase CT43_CH3303 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CT43_CH3303 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CT43_CH3304 PF02779 Transketolase, pyrimidine binding domain CT43_CH3304 PF02780 Transketolase, C-terminal domain CT43_CH3304 PF00456 Transketolase, thiamine diphosphate binding domain CT43_CH3305 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CT43_CH3305 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CT43_CH3306 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CT43_CH3306 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CT43_CH3307 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH3307 PF00107 Zinc-binding dehydrogenase CT43_CH3308 PF00296 Luciferase-like monooxygenase CT43_CH3309 PF14765 Polyketide synthase dehydratase CT43_CH3309 PF00109 Beta-ketoacyl synthase, N-terminal domain CT43_CH3309 PF00550 Phosphopantetheine attachment site CT43_CH3309 PF16197 Ketoacyl-synthetase C-terminal extension CT43_CH3309 PF08659 KR domain CT43_CH3309 PF02801 Beta-ketoacyl synthase, C-terminal domain CT43_CH3309 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH3309 PF00698 Acyl transferase domain CT43_CH3309 PF00107 Zinc-binding dehydrogenase CT43_CH3310 PF00106 short chain dehydrogenase CT43_CH3311 PF01447 Thermolysin metallopeptidase, catalytic domain CT43_CH3311 PF03413 Peptidase propeptide and YPEB domain CT43_CH3311 PF07504 Fungalysin/Thermolysin Propeptide Motif CT43_CH3311 PF02868 Thermolysin metallopeptidase, alpha-helical domain CT43_CH3313 PF00672 HAMP domain CT43_CH3313 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH3313 PF12729 Four helix bundle sensory module for signal transduction CT43_CH3314 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CT43_CH3315 PF01872 RibD C-terminal domain CT43_CH3315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CT43_CH3316 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CT43_CH3316 PF00925 GTP cyclohydrolase II CT43_CH3317 PF01638 HxlR-like helix-turn-helix CT43_CH3320 PF00248 Aldo/keto reductase family CT43_CH3321 PF07690 Major Facilitator Superfamily CT43_CH3323 PF03928 Haem-degrading CT43_CH3325 PF03831 PhnA domain CT43_CH3325 PF08274 PhnA Zinc-Ribbon CT43_CH3326 PF00916 Sulfate permease family CT43_CH3326 PF01740 STAS domain CT43_CH3335 PF03960 ArsC family CT43_CH3336 PF01638 HxlR-like helix-turn-helix CT43_CH3337 PF00392 Bacterial regulatory proteins, gntR family CT43_CH3337 PF07702 UTRA domain CT43_CH3339 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CT43_CH3339 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CT43_CH3341 PF01638 HxlR-like helix-turn-helix CT43_CH3342 PF01638 HxlR-like helix-turn-helix CT43_CH3343 PF00248 Aldo/keto reductase family CT43_CH3352 PF02567 Phenazine biosynthesis-like protein CT43_CH3356 PF13193 AMP-binding enzyme C-terminal domain CT43_CH3356 PF00501 AMP-binding enzyme CT43_CH3357 PF02525 Flavodoxin-like fold CT43_CH3358 PF01638 HxlR-like helix-turn-helix CT43_CH3360 PF01022 Bacterial regulatory protein, arsR family CT43_CH3361 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CT43_CH3361 PF01522 Polysaccharide deacetylase CT43_CH3362 PF12791 Anti-sigma factor N-terminus CT43_CH3363 PF04542 Sigma-70 region 2 CT43_CH3364 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CT43_CH3364 PF00535 Glycosyl transferase family 2 CT43_CH3365 PF01810 LysE type translocator CT43_CH3371 PF01061 ABC-2 type transporter CT43_CH3372 PF13732 Domain of unknown function (DUF4162) CT43_CH3372 PF00005 ABC transporter CT43_CH3375 PF03063 Prismane/CO dehydrogenase family CT43_CH3376 PF00753 Metallo-beta-lactamase superfamily CT43_CH3377 PF01183 Glycosyl hydrolases family 25 CT43_CH3377 PF01471 Putative peptidoglycan binding domain CT43_CH3381 PF00144 Beta-lactamase CT43_CH3389 PF00753 Metallo-beta-lactamase superfamily CT43_CH3390 PF00324 Amino acid permease CT43_CH3391 PF07690 Major Facilitator Superfamily CT43_CH3397 PF02585 GlcNAc-PI de-N-acetylase CT43_CH3398 PF08830 Protein of unknown function (DUF1806) CT43_CH3399 PF03600 Citrate transporter CT43_CH3402 PF01497 Periplasmic binding protein CT43_CH3403 PF01032 FecCD transport family CT43_CH3404 PF01032 FecCD transport family CT43_CH3405 PF05675 Protein of unknown function (DUF817) CT43_CH3406 PF13170 Protein of unknown function (DUF4003) CT43_CH3409 PF10901 Protein of unknown function (DUF2690) CT43_CH3411 PF03466 LysR substrate binding domain CT43_CH3411 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH3412 PF00107 Zinc-binding dehydrogenase CT43_CH3412 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH3417 PF00128 Alpha amylase, catalytic domain CT43_CH3417 PF09154 Domain of unknown function (DUF1939) CT43_CH3418 PF00797 N-acetyltransferase CT43_CH3419 PF08439 Oligopeptidase F CT43_CH3419 PF01432 Peptidase family M3 CT43_CH3420 PF04371 Porphyromonas-type peptidyl-arginine deiminase CT43_CH3423 PF01062 Bestrophin, RFP-TM, chloride channel CT43_CH3424 PF06146 Phosphate-starvation-inducible E CT43_CH3425 PF04371 Porphyromonas-type peptidyl-arginine deiminase CT43_CH3426 PF00144 Beta-lactamase CT43_CH3429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH3429 PF03466 LysR substrate binding domain CT43_CH3431 PF03009 Glycerophosphoryl diester phosphodiesterase family CT43_CH3432 PF01494 FAD binding domain CT43_CH3434 PF01022 Bacterial regulatory protein, arsR family CT43_CH3435 PF08240 Alcohol dehydrogenase GroES-like domain CT43_CH3435 PF00107 Zinc-binding dehydrogenase CT43_CH3436 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CT43_CH3437 PF18801 response regulator aspartate phosphatase H, N terminal CT43_CH3439 PF04299 Putative FMN-binding domain CT43_CH3442 PF01565 FAD binding domain CT43_CH3442 PF02913 FAD linked oxidases, C-terminal domain CT43_CH3446 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CT43_CH3447 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CT43_CH3447 PF18416 N-acetylglucosamine binding protein domain 2 CT43_CH3449 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH3455 PF00704 Glycosyl hydrolases family 18 CT43_CH3455 PF00041 Fibronectin type III domain CT43_CH3455 PF00553 Cellulose binding domain CT43_CH3458 PF00990 Diguanylate cyclase, GGDEF domain CT43_CH3458 PF00563 EAL domain CT43_CH3458 PF03707 Bacterial signalling protein N terminal repeat CT43_CH3460 PF00440 Bacterial regulatory proteins, tetR family CT43_CH3461 PF07968 Leukocidin/Hemolysin toxin family CT43_CH3462 PF01520 N-acetylmuramoyl-L-alanine amidase CT43_CH3462 PF00395 S-layer homology domain CT43_CH3463 PF02557 D-alanyl-D-alanine carboxypeptidase CT43_CH3468 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH3468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH3468 PF00989 PAS fold CT43_CH3469 PF08453 Peptidase family M9 N-terminal CT43_CH3469 PF01752 Collagenase CT43_CH3469 PF18496 Collagenase G catalytic helper subdomain CT43_CH3470 PF02308 MgtC family CT43_CH3473 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH3474 PF00497 Bacterial extracellular solute-binding proteins, family 3 CT43_CH3475 PF00005 ABC transporter CT43_CH3476 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH3477 PF04294 VanW like protein CT43_CH3479 PF13039 Protein of unknown function (DUF3900) CT43_CH3479 PF13037 Domain of unknown function (DUF3898) CT43_CH3483 PF00313 'Cold-shock' DNA-binding domain CT43_CH3485 PF00258 Flavodoxin CT43_CH3487 PF00293 NUDIX domain CT43_CH3489 PF00132 Bacterial transferase hexapeptide (six repeats) CT43_CH3491 PF00106 short chain dehydrogenase CT43_CH3493 PF00206 Lyase CT43_CH3493 PF14698 Argininosuccinate lyase C-terminal CT43_CH3495 PF01156 Inosine-uridine preferring nucleoside hydrolase CT43_CH3496 PF00474 Sodium:solute symporter family CT43_CH3498 PF00171 Aldehyde dehydrogenase family CT43_CH3500 PF14151 YfhD-like protein CT43_CH3501 PF13243 Squalene-hopene cyclase C-terminal domain CT43_CH3501 PF13249 Squalene-hopene cyclase N-terminal domain CT43_CH3502 PF02681 Divergent PAP2 family CT43_CH3503 PF00892 EamA-like transporter family CT43_CH3504 PF06961 Protein of unknown function (DUF1294) CT43_CH3507 PF10609 NUBPL iron-transfer P-loop NTPase CT43_CH3509 PF02391 MoaE protein CT43_CH3510 PF00994 Probable molybdopterin binding domain CT43_CH3510 PF03453 MoeA N-terminal region (domain I and II) CT43_CH3510 PF03454 MoeA C-terminal region (domain IV) CT43_CH3511 PF00899 ThiF family CT43_CH3512 PF01226 Formate/nitrite transporter CT43_CH3513 PF04055 Radical SAM superfamily CT43_CH3513 PF06463 Molybdenum Cofactor Synthesis C CT43_CH3514 PF02634 FdhD/NarQ family CT43_CH3515 PF10057 Uncharacterized conserved protein (DUF2294) CT43_CH3516 PF07849 Protein of unknown function (DUF1641) CT43_CH3517 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CT43_CH3517 PF00384 Molybdopterin oxidoreductase CT43_CH3517 PF01568 Molydopterin dinucleotide binding domain CT43_CH3517 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CT43_CH3517 PF00037 4Fe-4S binding domain CT43_CH3518 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH3521 PF13520 Amino acid permease CT43_CH3528 PF08241 Methyltransferase domain CT43_CH3529 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH3530 PF13276 HTH-like domain CT43_CH3530 PF00665 Integrase core domain CT43_CH3530 PF13333 Integrase core domain CT43_CH3532 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH3533 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_CH3534 PF03816 Cell envelope-related transcriptional attenuator domain CT43_CH3536 PF04542 Sigma-70 region 2 CT43_CH3536 PF08281 Sigma-70, region 4 CT43_CH3539 PF13732 Domain of unknown function (DUF4162) CT43_CH3539 PF00005 ABC transporter CT43_CH3543 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CT43_CH3543 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CT43_CH3544 PF00521 DNA gyrase/topoisomerase IV, subunit A CT43_CH3544 PF03989 DNA gyrase C-terminal domain, beta-propeller CT43_CH3545 PF00986 DNA gyrase B subunit, carboxyl terminus CT43_CH3545 PF00204 DNA gyrase B CT43_CH3545 PF01751 Toprim domain CT43_CH3545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH3546 PF13380 CoA binding domain CT43_CH3547 PF13180 PDZ domain CT43_CH3549 PF04055 Radical SAM superfamily CT43_CH3550 PF13597 Anaerobic ribonucleoside-triphosphate reductase CT43_CH3550 PF03477 ATP cone domain CT43_CH3551 PF02660 Glycerol-3-phosphate acyltransferase CT43_CH3552 PF01521 Iron-sulphur cluster biosynthesis CT43_CH3553 PF03061 Thioesterase superfamily CT43_CH3554 PF00704 Glycosyl hydrolases family 18 CT43_CH3554 PF01476 LysM domain CT43_CH3555 PF08177 Small acid-soluble spore protein N family CT43_CH3556 PF13040 Fur-regulated basic protein B CT43_CH3559 PF14579 Helix-hairpin-helix motif CT43_CH3559 PF02811 PHP domain CT43_CH3559 PF07733 Bacterial DNA polymerase III alpha NTPase domain CT43_CH3559 PF11490 DNA polymerase III polC-type N-terminus II CT43_CH3559 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CT43_CH3559 PF01336 OB-fold nucleic acid binding domain CT43_CH3559 PF00929 Exonuclease CT43_CH3560 PF00578 AhpC/TSA family CT43_CH3561 PF00664 ABC transporter transmembrane region CT43_CH3561 PF03412 Peptidase C39 family CT43_CH3561 PF00005 ABC transporter CT43_CH3562 PF00694 Aconitase C-terminal domain CT43_CH3562 PF00330 Aconitase family (aconitate hydratase) CT43_CH3564 PF01522 Polysaccharide deacetylase CT43_CH3566 PF08179 Small acid-soluble spore protein P family CT43_CH3568 PF07690 Major Facilitator Superfamily CT43_CH3570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CT43_CH3570 PF01411 tRNA synthetases class II (A) CT43_CH3570 PF02272 DHHA1 domain CT43_CH3571 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH3571 PF00293 NUDIX domain CT43_CH3573 PF00108 Thiolase, N-terminal domain CT43_CH3573 PF02803 Thiolase, C-terminal domain CT43_CH3574 PF00501 AMP-binding enzyme CT43_CH3574 PF13193 AMP-binding enzyme C-terminal domain CT43_CH3575 PF02632 BioY family CT43_CH3576 PF00501 AMP-binding enzyme CT43_CH3576 PF13193 AMP-binding enzyme C-terminal domain CT43_CH3577 PF01381 Helix-turn-helix CT43_CH3580 PF05532 CsbD-like CT43_CH3584 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH3584 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH3586 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH3586 PF13426 PAS domain CT43_CH3586 PF13188 PAS domain CT43_CH3586 PF00989 PAS fold CT43_CH3586 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH3587 PF01738 Dienelactone hydrolase family CT43_CH3588 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH3589 PF00474 Sodium:solute symporter family CT43_CH3590 PF01645 Conserved region in glutamate synthase CT43_CH3591 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CT43_CH3592 PF02559 CarD-like/TRCF domain CT43_CH3593 PF00491 Arginase family CT43_CH3594 PF01979 Amidohydrolase family CT43_CH3595 PF17392 Urocanase C-terminal domain CT43_CH3595 PF17391 Urocanase N-terminal domain CT43_CH3595 PF01175 Urocanase Rossmann-like domain CT43_CH3596 PF00221 Aromatic amino acid lyase CT43_CH3597 PF09021 HutP CT43_CH3598 PF01209 ubiE/COQ5 methyltransferase family CT43_CH3602 PF11084 Protein of unknown function (DUF2621) CT43_CH3603 PF07301 Protein of unknown function (DUF1453) CT43_CH3604 PF02683 Cytochrome C biogenesis protein transmembrane region CT43_CH3610 PF00005 ABC transporter CT43_CH3613 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH3613 PF03466 LysR substrate binding domain CT43_CH3614 PF03788 LrgA family CT43_CH3615 PF04172 LrgB-like family CT43_CH3616 PF00293 NUDIX domain CT43_CH3616 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH3618 PF01925 Sulfite exporter TauE/SafE CT43_CH3622 PF01183 Glycosyl hydrolases family 25 CT43_CH3622 PF08239 Bacterial SH3 domain CT43_CH3623 PF00005 ABC transporter CT43_CH3623 PF00664 ABC transporter transmembrane region CT43_CH3624 PF00005 ABC transporter CT43_CH3624 PF00664 ABC transporter transmembrane region CT43_CH3625 PF03672 Uncharacterised protein family (UPF0154) CT43_CH3626 PF10747 Sporulation inhibitor of replication protein SirA CT43_CH3627 PF02780 Transketolase, C-terminal domain CT43_CH3627 PF00456 Transketolase, thiamine diphosphate binding domain CT43_CH3627 PF02779 Transketolase, pyrimidine binding domain CT43_CH3628 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH3629 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH3630 PF00005 ABC transporter CT43_CH3631 PF00497 Bacterial extracellular solute-binding proteins, family 3 CT43_CH3632 PF00149 Calcineurin-like phosphoesterase CT43_CH3632 PF02872 5'-nucleotidase, C-terminal domain CT43_CH3633 PF01609 Transposase DDE domain CT43_CH3634 PF02872 5'-nucleotidase, C-terminal domain CT43_CH3634 PF00149 Calcineurin-like phosphoesterase CT43_CH3635 PF05979 Bacterial protein of unknown function (DUF896) CT43_CH3636 PF00239 Resolvase, N terminal domain CT43_CH3637 PF00717 Peptidase S24-like CT43_CH3637 PF01726 LexA DNA binding domain CT43_CH3640 PF03551 Transcriptional regulator PadR-like family CT43_CH3641 PF00120 Glutamine synthetase, catalytic domain CT43_CH3641 PF03951 Glutamine synthetase, beta-Grasp domain CT43_CH3642 PF13411 MerR HTH family regulatory protein CT43_CH3643 PF06838 Methionine gamma-lyase CT43_CH3644 PF16360 GTP-binding GTPase Middle Region CT43_CH3644 PF01926 50S ribosome-binding GTPase CT43_CH3644 PF13167 GTP-binding GTPase N-terminal CT43_CH3645 PF03458 UPF0126 domain CT43_CH3647 PF00004 ATPase family associated with various cellular activities (AAA) CT43_CH3647 PF17866 AAA lid domain CT43_CH3650 PF13333 Integrase core domain CT43_CH3650 PF00665 Integrase core domain CT43_CH3650 PF13276 HTH-like domain CT43_CH3652 PF17209 Hfq protein CT43_CH3655 PF01476 LysM domain CT43_CH3655 PF06725 3D domain CT43_CH3656 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CT43_CH3656 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CT43_CH3657 PF00294 pfkB family carbohydrate kinase CT43_CH3658 PF08220 DeoR-like helix-turn-helix domain CT43_CH3658 PF00455 DeoR C terminal sensor domain CT43_CH3659 PF00465 Iron-containing alcohol dehydrogenase CT43_CH3660 PF04238 Protein of unknown function (DUF420) CT43_CH3663 PF00324 Amino acid permease CT43_CH3664 PF00041 Fibronectin type III domain CT43_CH3664 PF00704 Glycosyl hydrolases family 18 CT43_CH3665 PF00149 Calcineurin-like phosphoesterase CT43_CH3665 PF10518 TAT (twin-arginine translocation) pathway signal sequence CT43_CH3666 PF01226 Formate/nitrite transporter CT43_CH3667 PF00216 Bacterial DNA-binding protein CT43_CH3669 PF00403 Heavy-metal-associated domain CT43_CH3670 PF00403 Heavy-metal-associated domain CT43_CH3671 PF02583 Metal-sensitive transcriptional repressor CT43_CH3675 PF00756 Putative esterase CT43_CH3676 PF00005 ABC transporter CT43_CH3677 PF01032 FecCD transport family CT43_CH3678 PF01032 FecCD transport family CT43_CH3679 PF01497 Periplasmic binding protein CT43_CH3680 PF03372 Endonuclease/Exonuclease/phosphatase family CT43_CH3681 PF12833 Helix-turn-helix domain CT43_CH3681 PF02805 Metal binding domain of Ada CT43_CH3682 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CT43_CH3682 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CT43_CH3683 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CT43_CH3683 PF00730 HhH-GPD superfamily base excision DNA repair protein CT43_CH3684 PF01546 Peptidase family M20/M25/M40 CT43_CH3684 PF07687 Peptidase dimerisation domain CT43_CH3688 PF00561 alpha/beta hydrolase fold CT43_CH3689 PF00563 EAL domain CT43_CH3689 PF00990 Diguanylate cyclase, GGDEF domain CT43_CH3689 PF03707 Bacterial signalling protein N terminal repeat CT43_CH3690 PF03033 Glycosyltransferase family 28 N-terminal domain CT43_CH3690 PF04101 Glycosyltransferase family 28 C-terminal domain CT43_CH3692 PF16363 GDP-mannose 4,6 dehydratase CT43_CH3693 PF08485 Polysaccharide biosynthesis protein C-terminal CT43_CH3693 PF02719 Polysaccharide biosynthesis protein CT43_CH3695 PF10787 Uncharacterised protein from bacillus cereus group CT43_CH3696 PF04172 LrgB-like family CT43_CH3697 PF03788 LrgA family CT43_CH3698 PF00155 Aminotransferase class I and II CT43_CH3698 PF00392 Bacterial regulatory proteins, gntR family CT43_CH3700 PF00392 Bacterial regulatory proteins, gntR family CT43_CH3700 PF07702 UTRA domain CT43_CH3701 PF00232 Glycosyl hydrolase family 1 CT43_CH3702 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CT43_CH3703 PF00082 Subtilase family CT43_CH3704 PF07486 Cell Wall Hydrolase CT43_CH3706 PF00884 Sulfatase CT43_CH3708 PF01695 IstB-like ATP binding protein CT43_CH3709 PF00665 Integrase core domain CT43_CH3710 PF00350 Dynamin family CT43_CH3711 PF08676 MutL C terminal dimerisation domain CT43_CH3711 PF01119 DNA mismatch repair protein, C-terminal domain CT43_CH3712 PF00488 MutS domain V CT43_CH3712 PF01624 MutS domain I CT43_CH3712 PF05188 MutS domain II CT43_CH3712 PF05192 MutS domain III CT43_CH3712 PF05190 MutS family domain IV CT43_CH3713 PF10628 Outer spore coat protein E (CotE) CT43_CH3714 PF06133 Control of competence regulator ComK, YlbF/YmcA CT43_CH3715 PF04055 Radical SAM superfamily CT43_CH3715 PF01938 TRAM domain CT43_CH3715 PF00919 Uncharacterized protein family UPF0004 CT43_CH3716 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CT43_CH3717 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CT43_CH3717 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CT43_CH3717 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CT43_CH3718 PF01244 Membrane dipeptidase (Peptidase family M19) CT43_CH3719 PF04232 Stage V sporulation protein S (SpoVS) CT43_CH3720 PF13277 YmdB-like protein CT43_CH3721 PF12072 Domain of unknown function (DUF3552) CT43_CH3721 PF00013 KH domain CT43_CH3721 PF01966 HD domain CT43_CH3722 PF00154 recA bacterial DNA recombination protein CT43_CH3723 PF02464 Competence-damaged protein CT43_CH3723 PF18146 Damage-inducible protein CinA KH domain CT43_CH3723 PF00994 Probable molybdopterin binding domain CT43_CH3724 PF01066 CDP-alcohol phosphatidyltransferase CT43_CH3725 PF13464 Domain of unknown function (DUF4115) CT43_CH3726 PF11868 Protein of unknown function (DUF3388) CT43_CH3727 PF11588 Protein of unknown function (DUF3243) CT43_CH3729 PF05193 Peptidase M16 inactive domain CT43_CH3729 PF00675 Insulinase (Peptidase family M16) CT43_CH3730 PF05193 Peptidase M16 inactive domain CT43_CH3735 PF07702 UTRA domain CT43_CH3735 PF00392 Bacterial regulatory proteins, gntR family CT43_CH3736 PF09397 Ftsk gamma domain CT43_CH3736 PF01580 FtsK/SpoIIIE family CT43_CH3736 PF17854 FtsK alpha domain CT43_CH3737 PF14035 YlzJ-like protein CT43_CH3738 PF00574 Clp protease CT43_CH3739 PF17770 Ribonuclease J C-terminal domain CT43_CH3739 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CT43_CH3739 PF00753 Metallo-beta-lactamase superfamily CT43_CH3740 PF00701 Dihydrodipicolinate synthetase family CT43_CH3741 PF00696 Amino acid kinase family CT43_CH3741 PF13840 ACT domain CT43_CH3743 PF02441 Flavoprotein CT43_CH3745 PF04740 LXG domain of WXG superfamily CT43_CH3745 PF14431 YwqJ-like deaminase CT43_CH3745 PF14449 Pre-toxin TG CT43_CH3751 PF01548 Transposase CT43_CH3751 PF02371 Transposase IS116/IS110/IS902 family CT43_CH3775 PF00589 Phage integrase family CT43_CH3779 PF10676 Spore germination protein gerPA/gerPF CT43_CH3786 PF00772 DnaB-like helicase N terminal domain CT43_CH3786 PF03796 DnaB-like helicase C terminal domain CT43_CH3793 PF01381 Helix-turn-helix CT43_CH3799 PF02441 Flavoprotein CT43_CH3800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CT43_CH3800 PF16924 Dipicolinate synthase subunit A N-terminal domain CT43_CH3801 PF05239 PRC-barrel domain CT43_CH3802 PF00675 Insulinase (Peptidase family M16) CT43_CH3802 PF05193 Peptidase M16 inactive domain CT43_CH3803 PF01522 Polysaccharide deacetylase CT43_CH3804 PF00575 S1 RNA binding domain CT43_CH3804 PF03725 3' exoribonuclease family, domain 2 CT43_CH3804 PF01138 3' exoribonuclease family, domain 1 CT43_CH3804 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CT43_CH3804 PF00013 KH domain CT43_CH3805 PF00312 Ribosomal protein S15 CT43_CH3806 PF06574 FAD synthetase CT43_CH3806 PF01687 Riboflavin kinase CT43_CH3807 PF01509 TruB family pseudouridylate synthase (N terminal domain) CT43_CH3807 PF16198 tRNA pseudouridylate synthase B C-terminal domain CT43_CH3808 PF02033 Ribosome-binding factor A CT43_CH3809 PF04456 Protein of unknown function (DUF503) CT43_CH3810 PF04760 Translation initiation factor IF-2, N-terminal region CT43_CH3810 PF11987 Translation-initiation factor 2 CT43_CH3810 PF00009 Elongation factor Tu GTP binding domain CT43_CH3811 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CT43_CH3812 PF04296 Protein of unknown function (DUF448) CT43_CH3813 PF13184 NusA-like KH domain CT43_CH3813 PF08529 NusA N-terminal domain CT43_CH3813 PF00575 S1 RNA binding domain CT43_CH3814 PF17384 RimP C-terminal SH3 domain CT43_CH3814 PF02576 RimP N-terminal domain CT43_CH3815 PF00929 Exonuclease CT43_CH3815 PF02811 PHP domain CT43_CH3815 PF14579 Helix-hairpin-helix motif CT43_CH3815 PF14480 DNA polymerase III polC-type N-terminus I CT43_CH3815 PF11490 DNA polymerase III polC-type N-terminus II CT43_CH3815 PF07733 Bacterial DNA polymerase III alpha NTPase domain CT43_CH3815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CT43_CH3817 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CT43_CH3817 PF03129 Anticodon binding domain CT43_CH3817 PF04073 Aminoacyl-tRNA editing domain CT43_CH3818 PF17820 PDZ domain CT43_CH3818 PF02163 Peptidase family M50 CT43_CH3819 PF13288 DXP reductoisomerase C-terminal domain CT43_CH3819 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CT43_CH3819 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CT43_CH3822 PF01255 Putative undecaprenyl diphosphate synthase CT43_CH3823 PF01765 Ribosome recycling factor CT43_CH3824 PF00696 Amino acid kinase family CT43_CH3825 PF00889 Elongation factor TS CT43_CH3826 PF00318 Ribosomal protein S2 CT43_CH3827 PF08222 CodY helix-turn-helix domain CT43_CH3827 PF06018 CodY GAF-like domain CT43_CH3828 PF10431 C-terminal, D2-small domain, of ClpB protein CT43_CH3828 PF07724 AAA domain (Cdc48 subfamily) CT43_CH3828 PF00004 ATPase family associated with various cellular activities (AAA) CT43_CH3829 PF10431 C-terminal, D2-small domain, of ClpB protein CT43_CH3829 PF07724 AAA domain (Cdc48 subfamily) CT43_CH3829 PF00004 ATPase family associated with various cellular activities (AAA) CT43_CH3830 PF00227 Proteasome subunit CT43_CH3831 PF00589 Phage integrase family CT43_CH3831 PF02899 Phage integrase, N-terminal SAM-like domain CT43_CH3832 PF01134 Glucose inhibited division protein A CT43_CH3833 PF01131 DNA topoisomerase CT43_CH3833 PF01751 Toprim domain CT43_CH3833 PF01396 Topoisomerase DNA binding C4 zinc finger CT43_CH3834 PF02481 DNA recombination-mediator protein A CT43_CH3835 PF02629 CoA binding domain CT43_CH3835 PF00549 CoA-ligase CT43_CH3836 PF08442 ATP-grasp domain CT43_CH3836 PF00549 CoA-ligase CT43_CH3837 PF01351 Ribonuclease HII CT43_CH3838 PF01926 50S ribosome-binding GTPase CT43_CH3839 PF10502 Signal peptidase, peptidase S26 CT43_CH3840 PF01245 Ribosomal protein L19 CT43_CH3841 PF01746 tRNA (Guanine-1)-methyltransferase CT43_CH3842 PF05239 PRC-barrel domain CT43_CH3842 PF01782 RimM N-terminal domain CT43_CH3844 PF00886 Ribosomal protein S16 CT43_CH3845 PF02881 SRP54-type protein, helical bundle domain CT43_CH3845 PF00448 SRP54-type protein, GTPase domain CT43_CH3845 PF02978 Signal peptide binding domain CT43_CH3846 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CT43_CH3847 PF00448 SRP54-type protein, GTPase domain CT43_CH3847 PF02881 SRP54-type protein, helical bundle domain CT43_CH3848 PF06470 SMC proteins Flexible Hinge Domain CT43_CH3848 PF02463 RecF/RecN/SMC N terminal domain CT43_CH3849 PF14622 Ribonuclease-III-like CT43_CH3849 PF00035 Double-stranded RNA binding motif CT43_CH3850 PF00550 Phosphopantetheine attachment site CT43_CH3852 PF00698 Acyl transferase domain CT43_CH3853 PF02504 Fatty acid synthesis protein CT43_CH3854 PF03061 Thioesterase superfamily CT43_CH3855 PF00270 DEAD/DEAH box helicase CT43_CH3855 PF17191 RecG wedge domain CT43_CH3855 PF00271 Helicase conserved C-terminal domain CT43_CH3856 PF13684 Dihydroxyacetone kinase family CT43_CH3856 PF02734 DAK2 domain CT43_CH3857 PF03780 Asp23 family, cell envelope-related function CT43_CH3858 PF00830 Ribosomal L28 family CT43_CH3859 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CT43_CH3859 PF04263 Thiamin pyrophosphokinase, catalytic domain CT43_CH3860 PF00834 Ribulose-phosphate 3 epimerase family CT43_CH3861 PF03193 RsgA GTPase CT43_CH3861 PF16745 RsgA N-terminal domain CT43_CH3862 PF03793 PASTA domain CT43_CH3862 PF00069 Protein kinase domain CT43_CH3864 PF04055 Radical SAM superfamily CT43_CH3865 PF01189 16S rRNA methyltransferase RsmB/F CT43_CH3865 PF01029 NusB family CT43_CH3866 PF00551 Formyl transferase CT43_CH3866 PF02911 Formyl transferase, C-terminal domain CT43_CH3867 PF01327 Polypeptide deformylase CT43_CH3868 PF00271 Helicase conserved C-terminal domain CT43_CH3868 PF18074 Primosomal protein N C-terminal domain CT43_CH3868 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CT43_CH3868 PF04851 Type III restriction enzyme, res subunit CT43_CH3868 PF17764 3′ DNA-binding domain (3′BD) CT43_CH3869 PF04127 DNA / pantothenate metabolism flavoprotein CT43_CH3869 PF02441 Flavoprotein CT43_CH3870 PF01192 RNA polymerase Rpb6 CT43_CH3871 PF00625 Guanylate kinase CT43_CH3872 PF04025 Domain of unknown function (DUF370) CT43_CH3873 PF03755 YicC-like family, N-terminal region CT43_CH3873 PF08340 Domain of unknown function (DUF1732) CT43_CH3874 PF00690 Cation transporter/ATPase, N-terminus CT43_CH3874 PF00689 Cation transporting ATPase, C-terminus CT43_CH3877 PF01321 Creatinase/Prolidase N-terminal domain CT43_CH3877 PF00557 Metallopeptidase family M24 CT43_CH3883 PF00156 Phosphoribosyl transferase domain CT43_CH3884 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CT43_CH3885 PF01180 Dihydroorotate dehydrogenase CT43_CH3886 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CT43_CH3887 PF02142 MGS-like domain CT43_CH3887 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CT43_CH3887 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CT43_CH3888 PF00117 Glutamine amidotransferase class-I CT43_CH3888 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CT43_CH3889 PF01979 Amidohydrolase family CT43_CH3890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CT43_CH3890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CT43_CH3891 PF00860 Permease family CT43_CH3892 PF00156 Phosphoribosyl transferase domain CT43_CH3893 PF01479 S4 domain CT43_CH3893 PF00849 RNA pseudouridylate synthase CT43_CH3894 PF01252 Signal peptidase (SPase) II CT43_CH3896 PF08264 Anticodon-binding domain of tRNA CT43_CH3896 PF06827 Zinc finger found in FPG and IleRS CT43_CH3896 PF00133 tRNA synthetases class I (I, L, M and V) CT43_CH3897 PF05103 DivIVA protein CT43_CH3898 PF01479 S4 domain CT43_CH3898 PF17774 Putative RNA-binding domain in YlmH CT43_CH3899 PF02325 YGGT family CT43_CH3900 PF04472 Cell division protein SepF CT43_CH3901 PF01168 Alanine racemase, N-terminal domain CT43_CH3903 PF05239 PRC-barrel domain CT43_CH3904 PF04539 Sigma-70 region 3 CT43_CH3904 PF04545 Sigma-70, region 4 CT43_CH3904 PF04542 Sigma-70 region 2 CT43_CH3905 PF04542 Sigma-70 region 2 CT43_CH3905 PF04545 Sigma-70, region 4 CT43_CH3906 PF03419 Sporulation factor SpoIIGA CT43_CH3907 PF12327 FtsZ family, C-terminal domain CT43_CH3907 PF00091 Tubulin/FtsZ family, GTPase domain CT43_CH3908 PF02491 SHS2 domain inserted in FTSA CT43_CH3909 PF03799 Cell division protein FtsQ CT43_CH3909 PF08478 POTRA domain, FtsQ-type CT43_CH3910 PF01565 FAD binding domain CT43_CH3910 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CT43_CH3911 PF03033 Glycosyltransferase family 28 N-terminal domain CT43_CH3911 PF04101 Glycosyltransferase family 28 C-terminal domain CT43_CH3912 PF01098 Cell cycle protein CT43_CH3913 PF02875 Mur ligase family, glutamate ligase domain CT43_CH3913 PF08245 Mur ligase middle domain CT43_CH3914 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CT43_CH3914 PF00953 Glycosyl transferase family 4 CT43_CH3915 PF08245 Mur ligase middle domain CT43_CH3915 PF02875 Mur ligase family, glutamate ligase domain CT43_CH3915 PF01225 Mur ligase family, catalytic domain CT43_CH3916 PF03717 Penicillin-binding Protein dimerisation domain CT43_CH3916 PF03793 PASTA domain CT43_CH3916 PF00905 Penicillin binding protein transpeptidase domain CT43_CH3918 PF04977 Septum formation initiator CT43_CH3919 PF01795 MraW methylase family CT43_CH3920 PF10079 Bacillithiol biosynthesis BshC CT43_CH3921 PF08546 Ketopantoate reductase PanE/ApbA C terminal CT43_CH3921 PF02558 Ketopantoate reductase PanE/ApbA CT43_CH3922 PF00583 Acetyltransferase (GNAT) family CT43_CH3924 PF01783 Ribosomal L32p protein family CT43_CH3925 PF02620 Large ribosomal RNA subunit accumulation protein YceD CT43_CH3926 PF05636 HIGH Nucleotidyl Transferase CT43_CH3927 PF13180 PDZ domain CT43_CH3927 PF05362 Lon protease (S16) C-terminal proteolytic domain CT43_CH3928 PF01734 Patatin-like phospholipase CT43_CH3929 PF07670 Nucleoside recognition CT43_CH3930 PF01467 Cytidylyltransferase-like CT43_CH3933 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CT43_CH3934 PF06133 Control of competence regulator ComK, YlbF/YmcA CT43_CH3935 PF00300 Histidine phosphatase superfamily (branch 1) CT43_CH3936 PF14003 YlbE-like protein CT43_CH3938 PF00188 Cysteine-rich secretory protein family CT43_CH3938 PF14504 CAP-associated N-terminal CT43_CH3939 PF08868 YugN-like family CT43_CH3941 PF13276 HTH-like domain CT43_CH3941 PF00665 Integrase core domain CT43_CH3941 PF13333 Integrase core domain CT43_CH3942 PF00795 Carbon-nitrogen hydrolase CT43_CH3943 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_CH3944 PF00795 Carbon-nitrogen hydrolase CT43_CH3945 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CT43_CH3946 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CT43_CH3947 PF00510 Cytochrome c oxidase subunit III CT43_CH3948 PF00115 Cytochrome C and Quinol oxidase polypeptide I CT43_CH3949 PF00115 Cytochrome C and Quinol oxidase polypeptide I CT43_CH3950 PF00034 Cytochrome c CT43_CH3950 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CT43_CH3950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CT43_CH3951 PF01040 UbiA prenyltransferase family CT43_CH3952 PF02628 Cytochrome oxidase assembly protein CT43_CH3953 PF00364 Biotin-requiring enzyme CT43_CH3953 PF02436 Conserved carboxylase domain CT43_CH3953 PF02785 Biotin carboxylase C-terminal domain CT43_CH3953 PF00289 Biotin carboxylase, N-terminal domain CT43_CH3953 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CT43_CH3953 PF00682 HMGL-like CT43_CH3954 PF01098 Cell cycle protein CT43_CH3955 PF07408 Protein of unknown function (DUF1507) CT43_CH3957 PF02562 PhoH-like protein CT43_CH3957 PF13638 PIN domain CT43_CH3959 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CT43_CH3961 PF14036 YlaH-like protein CT43_CH3964 PF00459 Inositol monophosphatase family CT43_CH3966 PF06335 Protein of unknown function (DUF1054) CT43_CH3967 PF05256 Uncharacterised protein family (UPF0223) CT43_CH3968 PF01276 Orn/Lys/Arg decarboxylase, major domain CT43_CH3968 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CT43_CH3975 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH3975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT43_CH3976 PF02817 e3 binding domain CT43_CH3976 PF00364 Biotin-requiring enzyme CT43_CH3976 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CT43_CH3977 PF02779 Transketolase, pyrimidine binding domain CT43_CH3977 PF02780 Transketolase, C-terminal domain CT43_CH3978 PF00676 Dehydrogenase E1 component CT43_CH3980 PF01327 Polypeptide deformylase CT43_CH3983 PF17770 Ribonuclease J C-terminal domain CT43_CH3983 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CT43_CH3983 PF00753 Metallo-beta-lactamase superfamily CT43_CH3984 PF02254 TrkA-N domain CT43_CH3984 PF02080 TrkA-C domain CT43_CH3986 PF01546 Peptidase family M20/M25/M40 CT43_CH3986 PF07687 Peptidase dimerisation domain CT43_CH3987 PF14602 Hexapeptide repeat of succinyl-transferase CT43_CH3987 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CT43_CH3987 PF00132 Bacterial transferase hexapeptide (six repeats) CT43_CH3988 PF03466 LysR substrate binding domain CT43_CH3988 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH3991 PF04308 Ribonuclease H-like CT43_CH3993 PF08796 Protein of unknown function (DUF1797) CT43_CH3996 PF00563 EAL domain CT43_CH3996 PF10388 EAL-domain associated signalling protein domain CT43_CH3998 PF00149 Calcineurin-like phosphoesterase CT43_CH3998 PF10518 TAT (twin-arginine translocation) pathway signal sequence CT43_CH4000 PF13090 Polyphosphate kinase C-terminal domain 2 CT43_CH4000 PF02503 Polyphosphate kinase middle domain CT43_CH4000 PF17941 Polyphosphate kinase C-terminal domain 1 CT43_CH4000 PF13089 Polyphosphate kinase N-terminal domain CT43_CH4001 PF02541 Ppx/GppA phosphatase family CT43_CH4002 PF14177 YkyB-like protein CT43_CH4006 PF07690 Major Facilitator Superfamily CT43_CH4008 PF08267 Cobalamin-independent synthase, N-terminal domain CT43_CH4008 PF01717 Cobalamin-independent synthase, Catalytic domain CT43_CH4010 PF14040 Deoxyribonuclease NucA/NucB CT43_CH4013 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH4013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4016 PF00155 Aminotransferase class I and II CT43_CH4017 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CT43_CH4017 PF00356 Bacterial regulatory proteins, lacI family CT43_CH4018 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH4019 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH4020 PF13416 Bacterial extracellular solute-binding protein CT43_CH4021 PF02903 Alpha amylase, N-terminal ig-like domain CT43_CH4021 PF00128 Alpha amylase, catalytic domain CT43_CH4021 PF16657 Maltogenic Amylase, C-terminal domain CT43_CH4022 PF16657 Maltogenic Amylase, C-terminal domain CT43_CH4022 PF00128 Alpha amylase, catalytic domain CT43_CH4023 PF00005 ABC transporter CT43_CH4023 PF17912 MalK OB fold domain CT43_CH4023 PF03459 TOBE domain CT43_CH4029 PF00108 Thiolase, N-terminal domain CT43_CH4029 PF02803 Thiolase, C-terminal domain CT43_CH4030 PF00293 NUDIX domain CT43_CH4035 PF03551 Transcriptional regulator PadR-like family CT43_CH4039 PF01636 Phosphotransferase enzyme family CT43_CH4040 PF00795 Carbon-nitrogen hydrolase CT43_CH4041 PF00155 Aminotransferase class I and II CT43_CH4042 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CT43_CH4042 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CT43_CH4044 PF00596 Class II Aldolase and Adducin N-terminal domain CT43_CH4045 PF03079 ARD/ARD' family CT43_CH4048 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CT43_CH4048 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CT43_CH4049 PF00144 Beta-lactamase CT43_CH4050 PF00990 Diguanylate cyclase, GGDEF domain CT43_CH4051 PF00881 Nitroreductase family CT43_CH4054 PF02896 PEP-utilising enzyme, TIM barrel domain CT43_CH4054 PF00391 PEP-utilising enzyme, mobile domain CT43_CH4054 PF05524 PEP-utilising enzyme, N-terminal CT43_CH4055 PF00381 PTS HPr component phosphorylation site CT43_CH4056 PF00367 phosphotransferase system, EIIB CT43_CH4056 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CT43_CH4056 PF02378 Phosphotransferase system, EIIC CT43_CH4057 PF02378 Phosphotransferase system, EIIC CT43_CH4057 PF00367 phosphotransferase system, EIIB CT43_CH4057 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CT43_CH4058 PF00874 PRD domain CT43_CH4058 PF03123 CAT RNA binding domain CT43_CH4061 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CT43_CH4062 PF01979 Amidohydrolase family CT43_CH4064 PF04079 Segregation and condensation complex subunit ScpB CT43_CH4065 PF02616 Segregation and condensation protein ScpA CT43_CH4066 PF03745 Domain of unknown function (DUF309) CT43_CH4067 PF00583 Acetyltransferase (GNAT) family CT43_CH4068 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CT43_CH4069 PF06207 Protein of unknown function (DUF1002) CT43_CH4071 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH4072 PF14097 Stage V sporulation protein AE1 CT43_CH4073 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CT43_CH4074 PF07451 Stage V sporulation protein AD (SpoVAD) CT43_CH4075 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CT43_CH4076 PF13782 Stage V sporulation protein AB CT43_CH4077 PF12164 Stage V sporulation protein AA CT43_CH4079 PF00209 Sodium:neurotransmitter symporter family CT43_CH4080 PF04542 Sigma-70 region 2 CT43_CH4080 PF04539 Sigma-70 region 3 CT43_CH4080 PF04545 Sigma-70, region 4 CT43_CH4081 PF13581 Histidine kinase-like ATPase domain CT43_CH4082 PF01740 STAS domain CT43_CH4083 PF00768 D-alanyl-D-alanine carboxypeptidase CT43_CH4083 PF07943 Penicillin-binding protein 5, C-terminal domain CT43_CH4084 PF00392 Bacterial regulatory proteins, gntR family CT43_CH4085 PF00005 ABC transporter CT43_CH4089 PF01047 MarR family CT43_CH4091 PF00860 Permease family CT43_CH4092 PF01544 CorA-like Mg2+ transporter protein CT43_CH4093 PF02885 Glycosyl transferase family, helical bundle domain CT43_CH4093 PF00591 Glycosyl transferase family, a/b domain CT43_CH4093 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CT43_CH4094 PF01048 Phosphorylase superfamily CT43_CH4095 PF01676 Metalloenzyme superfamily CT43_CH4096 PF13115 YtkA-like CT43_CH4097 PF02899 Phage integrase, N-terminal SAM-like domain CT43_CH4097 PF00589 Phage integrase family CT43_CH4098 PF14004 Protein of unknown function (DUF4227) CT43_CH4099 PF01475 Ferric uptake regulator family CT43_CH4100 PF01944 Stage II sporulation protein M CT43_CH4103 PF00293 NUDIX domain CT43_CH4104 PF13072 Mother cell inhibitor of FtsZ CT43_CH4105 PF00248 Aldo/keto reductase family CT43_CH4106 PF00248 Aldo/keto reductase family CT43_CH4107 PF13673 Acetyltransferase (GNAT) domain CT43_CH4107 PF04229 GrpB protein CT43_CH4109 PF02872 5'-nucleotidase, C-terminal domain CT43_CH4109 PF00149 Calcineurin-like phosphoesterase CT43_CH4109 PF00565 Staphylococcal nuclease homologue CT43_CH4109 PF00746 LPXTG cell wall anchor motif CT43_CH4111 PF12146 Serine aminopeptidase, S33 CT43_CH4112 PF03553 Na+/H+ antiporter family CT43_CH4112 PF13726 Na+-H+ antiporter family CT43_CH4113 PF00583 Acetyltransferase (GNAT) family CT43_CH4114 PF12146 Serine aminopeptidase, S33 CT43_CH4115 PF10827 Protein of unknown function (DUF2552) CT43_CH4117 PF01872 RibD C-terminal domain CT43_CH4117 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CT43_CH4118 PF00677 Lumazine binding domain CT43_CH4119 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CT43_CH4119 PF00925 GTP cyclohydrolase II CT43_CH4120 PF00885 6,7-dimethyl-8-ribityllumazine synthase CT43_CH4122 PF04055 Radical SAM superfamily CT43_CH4122 PF06968 Biotin and Thiamin Synthesis associated domain CT43_CH4123 PF13847 Methyltransferase domain CT43_CH4124 PF08241 Methyltransferase domain CT43_CH4124 PF12697 Alpha/beta hydrolase family CT43_CH4125 PF00155 Aminotransferase class I and II CT43_CH4127 PF00202 Aminotransferase class-III CT43_CH4130 PF02872 5'-nucleotidase, C-terminal domain CT43_CH4130 PF00149 Calcineurin-like phosphoesterase CT43_CH4132 PF13404 AsnC-type helix-turn-helix domain CT43_CH4132 PF01037 Lrp/AsnC ligand binding domain CT43_CH4140 PF14431 YwqJ-like deaminase CT43_CH4140 PF04740 LXG domain of WXG superfamily CT43_CH4140 PF14449 Pre-toxin TG CT43_CH4142 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CT43_CH4142 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CT43_CH4143 PF00202 Aminotransferase class-III CT43_CH4144 PF00696 Amino acid kinase family CT43_CH4145 PF01960 ArgJ family CT43_CH4146 PF01118 Semialdehyde dehydrogenase, NAD binding domain CT43_CH4146 PF02774 Semialdehyde dehydrogenase, dimerisation domain CT43_CH4148 PF00106 short chain dehydrogenase CT43_CH4149 PF00753 Metallo-beta-lactamase superfamily CT43_CH4150 PF14748 Pyrroline-5-carboxylate reductase dimerisation CT43_CH4150 PF03807 NADP oxidoreductase coenzyme F420-dependent CT43_CH4151 PF03313 Serine dehydratase alpha chain CT43_CH4152 PF01842 ACT domain CT43_CH4152 PF03315 Serine dehydratase beta chain CT43_CH4154 PF12706 Beta-lactamase superfamily domain CT43_CH4154 PF00753 Metallo-beta-lactamase superfamily CT43_CH4157 PF00689 Cation transporting ATPase, C-terminus CT43_CH4157 PF00690 Cation transporter/ATPase, N-terminus CT43_CH4158 PF02308 MgtC family CT43_CH4159 PF00817 impB/mucB/samB family CT43_CH4159 PF11799 impB/mucB/samB family C-terminal domain CT43_CH4159 PF11798 IMS family HHH motif CT43_CH4160 PF07687 Peptidase dimerisation domain CT43_CH4160 PF01546 Peptidase family M20/M25/M40 CT43_CH4161 PF13302 Acetyltransferase (GNAT) domain CT43_CH4163 PF03734 L,D-transpeptidase catalytic domain CT43_CH4164 PF06081 Aromatic acid exporter family member 1 CT43_CH4164 PF11728 Putative aromatic acid exporter C-terminal domain CT43_CH4165 PF00005 ABC transporter CT43_CH4166 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH4167 PF00497 Bacterial extracellular solute-binding proteins, family 3 CT43_CH4168 PF06491 Disulphide isomerase CT43_CH4169 PF11208 Protein of unknown function (DUF2992) CT43_CH4170 PF09297 NADH pyrophosphatase zinc ribbon domain CT43_CH4170 PF00293 NUDIX domain CT43_CH4171 PF04239 Protein of unknown function (DUF421) CT43_CH4172 PF01098 Cell cycle protein CT43_CH4173 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CT43_CH4173 PF02817 e3 binding domain CT43_CH4173 PF00364 Biotin-requiring enzyme CT43_CH4174 PF02780 Transketolase, C-terminal domain CT43_CH4174 PF02779 Transketolase, pyrimidine binding domain CT43_CH4175 PF00676 Dehydrogenase E1 component CT43_CH4176 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT43_CH4176 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH4177 PF00871 Acetokinase family CT43_CH4178 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CT43_CH4178 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CT43_CH4179 PF01515 Phosphate acetyl/butaryl transferase CT43_CH4180 PF02954 Bacterial regulatory protein, Fis family CT43_CH4180 PF00989 PAS fold CT43_CH4180 PF00158 Sigma-54 interaction domain CT43_CH4182 PF03009 Glycerophosphoryl diester phosphodiesterase family CT43_CH4183 PF14174 YycC-like protein CT43_CH4185 PF08769 Sporulation initiation factor Spo0A C terminal CT43_CH4185 PF00072 Response regulator receiver domain CT43_CH4186 PF05580 SpoIVB peptidase S55 CT43_CH4186 PF17820 PDZ domain CT43_CH4187 PF13476 AAA domain CT43_CH4188 PF02463 RecF/RecN/SMC N terminal domain CT43_CH4189 PF01316 Arginine repressor, DNA binding domain CT43_CH4189 PF02863 Arginine repressor, C-terminal domain CT43_CH4190 PF01728 FtsJ-like methyltransferase CT43_CH4190 PF01479 S4 domain CT43_CH4191 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CT43_CH4191 PF02779 Transketolase, pyrimidine binding domain CT43_CH4191 PF02780 Transketolase, C-terminal domain CT43_CH4192 PF00348 Polyprenyl synthetase CT43_CH4193 PF02609 Exonuclease VII small subunit CT43_CH4194 PF13742 OB-fold nucleic acid binding domain CT43_CH4194 PF02601 Exonuclease VII, large subunit CT43_CH4195 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CT43_CH4195 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CT43_CH4196 PF01029 NusB family CT43_CH4197 PF03780 Asp23 family, cell envelope-related function CT43_CH4198 PF02785 Biotin carboxylase C-terminal domain CT43_CH4198 PF00289 Biotin carboxylase, N-terminal domain CT43_CH4198 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CT43_CH4199 PF00364 Biotin-requiring enzyme CT43_CH4202 PF09581 Stage III sporulation protein AF (Spore_III_AF) CT43_CH4203 PF09546 Stage III sporulation protein AE (spore_III_AE) CT43_CH4204 PF06686 Stage III sporulation protein AC/AD protein family CT43_CH4205 PF06686 Stage III sporulation protein AC/AD protein family CT43_CH4206 PF09548 Stage III sporulation protein AB (spore_III_AB) CT43_CH4211 PF09285 Elongation factor P, C-terminal CT43_CH4211 PF08207 Elongation factor P (EF-P) KOW-like domain CT43_CH4211 PF01132 Elongation factor P (EF-P) OB domain CT43_CH4212 PF01321 Creatinase/Prolidase N-terminal domain CT43_CH4212 PF00557 Metallopeptidase family M24 CT43_CH4213 PF01220 Dehydroquinase class II CT43_CH4214 PF11085 Conserved membrane protein YqhR CT43_CH4215 PF07136 Protein of unknown function (DUF1385) CT43_CH4217 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH4218 PF01325 Iron dependent repressor, N-terminal DNA binding domain CT43_CH4218 PF02742 Iron dependent repressor, metal binding and dimerisation domain CT43_CH4223 PF03099 Biotin/lipoate A/B protein ligase family CT43_CH4224 PF00581 Rhodanese-like domain CT43_CH4226 PF00356 Bacterial regulatory proteins, lacI family CT43_CH4226 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CT43_CH4228 PF00893 Small Multidrug Resistance protein CT43_CH4229 PF00893 Small Multidrug Resistance protein CT43_CH4235 PF00005 ABC transporter CT43_CH4236 PF00392 Bacterial regulatory proteins, gntR family CT43_CH4239 PF02347 Glycine cleavage system P-protein CT43_CH4240 PF02347 Glycine cleavage system P-protein CT43_CH4241 PF01571 Aminomethyltransferase folate-binding domain CT43_CH4241 PF08669 Glycine cleavage T-protein C-terminal barrel domain CT43_CH4242 PF00176 SNF2 family N-terminal domain CT43_CH4242 PF00271 Helicase conserved C-terminal domain CT43_CH4243 PF11079 Bacterial protein YqhG of unknown function CT43_CH4247 PF14038 YqzE-like protein CT43_CH4248 PF01202 Shikimate kinase CT43_CH4255 PF00482 Type II secretion system (T2SS), protein F CT43_CH4256 PF00437 Type II/IV secretion system protein CT43_CH4258 PF11117 Protein of unknown function (DUF2626) CT43_CH4259 PF00375 Sodium:dicarboxylate symporter family CT43_CH4267 PF04101 Glycosyltransferase family 28 C-terminal domain CT43_CH4267 PF03033 Glycosyltransferase family 28 N-terminal domain CT43_CH4268 PF01385 Probable transposase CT43_CH4268 PF07282 Putative transposase DNA-binding domain CT43_CH4268 PF12323 Helix-turn-helix domain CT43_CH4269 PF03033 Glycosyltransferase family 28 N-terminal domain CT43_CH4269 PF04101 Glycosyltransferase family 28 C-terminal domain CT43_CH4270 PF02607 B12 binding domain CT43_CH4270 PF02574 Homocysteine S-methyltransferase CT43_CH4270 PF02310 B12 binding domain CT43_CH4270 PF00809 Pterin binding enzyme CT43_CH4270 PF02965 Vitamin B12 dependent methionine synthase, activation domain CT43_CH4271 PF02219 Methylenetetrahydrofolate reductase CT43_CH4271 PF02574 Homocysteine S-methyltransferase CT43_CH4272 PF01053 Cys/Met metabolism PLP-dependent enzyme CT43_CH4273 PF01053 Cys/Met metabolism PLP-dependent enzyme CT43_CH4275 PF01022 Bacterial regulatory protein, arsR family CT43_CH4277 PF00753 Metallo-beta-lactamase superfamily CT43_CH4278 PF10958 Protein of unknown function (DUF2759) CT43_CH4279 PF00480 ROK family CT43_CH4280 PF06014 Bacterial protein of unknown function (DUF910) CT43_CH4281 PF01812 5-formyltetrahydrofolate cyclo-ligase family CT43_CH4282 PF00483 Nucleotidyl transferase CT43_CH4284 PF01895 PhoU domain CT43_CH4285 PF00005 ABC transporter CT43_CH4286 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH4287 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH4288 PF12849 PBP superfamily domain CT43_CH4290 PF07690 Major Facilitator Superfamily CT43_CH4291 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CT43_CH4291 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CT43_CH4295 PF04551 GcpE protein CT43_CH4296 PF01475 Ferric uptake regulator family CT43_CH4297 PF00950 ABC 3 transport family CT43_CH4298 PF00005 ABC transporter CT43_CH4299 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH4299 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH4300 PF11116 Protein of unknown function (DUF2624) CT43_CH4301 PF01261 Xylose isomerase-like TIM barrel CT43_CH4302 PF00271 Helicase conserved C-terminal domain CT43_CH4302 PF00270 DEAD/DEAH box helicase CT43_CH4304 PF02401 LytB protein CT43_CH4305 PF01784 NIF3 (NGG1p interacting factor 3) CT43_CH4306 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CT43_CH4307 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CT43_CH4308 PF04545 Sigma-70, region 4 CT43_CH4308 PF04539 Sigma-70 region 3 CT43_CH4308 PF00140 Sigma-70 factor, region 1.2 CT43_CH4308 PF04542 Sigma-70 region 2 CT43_CH4308 PF03979 Sigma-70 factor, region 1.1 CT43_CH4309 PF01807 CHC2 zinc finger CT43_CH4309 PF08275 DNA primase catalytic core, N-terminal domain CT43_CH4309 PF10410 DnaB-helicase binding domain of primase CT43_CH4312 PF03618 Kinase/pyrophosphorylase CT43_CH4313 PF00571 CBS domain CT43_CH4313 PF08279 HTH domain CT43_CH4314 PF11967 Recombination protein O N terminal CT43_CH4314 PF02565 Recombination protein O C terminal CT43_CH4316 PF01926 50S ribosome-binding GTPase CT43_CH4316 PF07650 KH domain CT43_CH4317 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CT43_CH4318 PF01219 Prokaryotic diacylglycerol kinase CT43_CH4319 PF02130 Uncharacterized protein family UPF0054 CT43_CH4320 PF01966 HD domain CT43_CH4320 PF07698 7TM receptor with intracellular HD hydrolase CT43_CH4320 PF07697 7TM-HD extracellular CT43_CH4321 PF02562 PhoH-like protein CT43_CH4322 PF06898 Putative stage IV sporulation protein YqfD CT43_CH4323 PF07873 YabP family CT43_CH4325 PF09424 Yqey-like protein CT43_CH4326 PF01165 Ribosomal protein S21 CT43_CH4327 PF00919 Uncharacterized protein family UPF0004 CT43_CH4327 PF04055 Radical SAM superfamily CT43_CH4327 PF01938 TRAM domain CT43_CH4328 PF04452 RNA methyltransferase CT43_CH4330 PF00684 DnaJ central domain CT43_CH4330 PF00226 DnaJ domain CT43_CH4330 PF01556 DnaJ C terminal domain CT43_CH4331 PF00012 Hsp70 protein CT43_CH4332 PF01025 GrpE CT43_CH4333 PF01628 HrcA protein C terminal domain CT43_CH4334 PF04055 Radical SAM superfamily CT43_CH4334 PF06969 HemN C-terminal domain CT43_CH4335 PF01638 HxlR-like helix-turn-helix CT43_CH4336 PF03144 Elongation factor Tu domain 2 CT43_CH4336 PF06421 GTP-binding protein LepA C-terminus CT43_CH4336 PF00679 Elongation factor G C-terminus CT43_CH4336 PF00009 Elongation factor Tu GTP binding domain CT43_CH4338 PF03418 Germination protease CT43_CH4339 PF01649 Ribosomal protein S20 CT43_CH4340 PF06144 DNA polymerase III, delta subunit CT43_CH4341 PF14141 YqzM-like protein CT43_CH4342 PF03772 Competence protein CT43_CH4342 PF00753 Metallo-beta-lactamase superfamily CT43_CH4342 PF13567 Domain of unknown function (DUF4131) CT43_CH4343 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CT43_CH4344 PF10531 SLBB domain CT43_CH4345 PF03807 NADP oxidoreductase coenzyme F420-dependent CT43_CH4345 PF14748 Pyrroline-5-carboxylate reductase dimerisation CT43_CH4346 PF13649 Methyltransferase domain CT43_CH4348 PF01966 HD domain CT43_CH4349 PF01467 Cytidylyltransferase-like CT43_CH4350 PF01985 CRS1 / YhbY (CRM) domain CT43_CH4351 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CT43_CH4351 PF01488 Shikimate / quinate 5-dehydrogenase CT43_CH4351 PF08501 Shikimate dehydrogenase substrate binding domain CT43_CH4352 PF01926 50S ribosome-binding GTPase CT43_CH4355 PF02666 Phosphatidylserine decarboxylase CT43_CH4356 PF04545 Sigma-70, region 4 CT43_CH4356 PF04542 Sigma-70 region 2 CT43_CH4358 PF16244 Domain of unknown function (DUF4901) CT43_CH4359 PF00471 Ribosomal protein L33 CT43_CH4360 PF00881 Nitroreductase family CT43_CH4361 PF04607 Region found in RelA / SpoT proteins CT43_CH4363 PF00245 Alkaline phosphatase CT43_CH4364 PF00583 Acetyltransferase (GNAT) family CT43_CH4365 PF08386 TAP-like protein CT43_CH4365 PF00561 alpha/beta hydrolase fold CT43_CH4372 PF00082 Subtilase family CT43_CH4372 PF13860 FlgD Ig-like domain CT43_CH4372 PF02225 PA domain CT43_CH4372 PF05922 Peptidase inhibitor I9 CT43_CH4374 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CT43_CH4376 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT43_CH4377 PF07681 DoxX CT43_CH4383 PF00005 ABC transporter CT43_CH4384 PF01032 FecCD transport family CT43_CH4385 PF01497 Periplasmic binding protein CT43_CH4387 PF14143 YrhC-like protein CT43_CH4388 PF00465 Iron-containing alcohol dehydrogenase CT43_CH4388 PF00171 Aldehyde dehydrogenase family CT43_CH4389 PF01053 Cys/Met metabolism PLP-dependent enzyme CT43_CH4390 PF00291 Pyridoxal-phosphate dependent enzyme CT43_CH4391 PF01048 Phosphorylase superfamily CT43_CH4392 PF08241 Methyltransferase domain CT43_CH4395 PF03717 Penicillin-binding Protein dimerisation domain CT43_CH4395 PF00905 Penicillin binding protein transpeptidase domain CT43_CH4396 PF03449 Transcription elongation factor, N-terminal CT43_CH4396 PF01272 Transcription elongation factor, GreA/GreB, C-term CT43_CH4397 PF00485 Phosphoribulokinase / Uridine kinase family CT43_CH4401 PF02618 YceG-like family CT43_CH4402 PF06949 Protein of unknown function (DUF1292) CT43_CH4403 PF03652 Holliday junction resolvase CT43_CH4405 PF02272 DHHA1 domain CT43_CH4405 PF01411 tRNA synthetases class II (A) CT43_CH4405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CT43_CH4407 PF01594 AI-2E family transporter CT43_CH4411 PF14490 Helix-hairpin-helix containing domain CT43_CH4411 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CT43_CH4411 PF13538 UvrD-like helicase C-terminal domain CT43_CH4414 PF00266 Aminotransferase class-V CT43_CH4415 PF02082 Transcriptional regulator CT43_CH4416 PF16193 AAA C-terminal domain CT43_CH4416 PF12002 MgsA AAA+ ATPase C terminal CT43_CH4416 PF05496 Holliday junction DNA helicase RuvB P-loop domain CT43_CH4418 PF00899 ThiF family CT43_CH4419 PF02938 GAD domain CT43_CH4419 PF00152 tRNA synthetases class II (D, K and N) CT43_CH4419 PF01336 OB-fold nucleic acid binding domain CT43_CH4420 PF03129 Anticodon binding domain CT43_CH4420 PF13393 Histidyl-tRNA synthetase CT43_CH4422 PF02580 D-Tyr-tRNA(Tyr) deacylase CT43_CH4423 PF13291 ACT domain CT43_CH4423 PF04607 Region found in RelA / SpoT proteins CT43_CH4423 PF02824 TGS domain CT43_CH4424 PF00156 Phosphoribosyl transferase domain CT43_CH4425 PF17768 RecJ OB domain CT43_CH4425 PF02272 DHHA1 domain CT43_CH4425 PF01368 DHH family CT43_CH4425 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CT43_CH4426 PF16916 Dimerisation domain of Zinc Transporter CT43_CH4426 PF01545 Cation efflux family CT43_CH4427 PF02355 Protein export membrane protein CT43_CH4427 PF07549 SecD/SecF GG Motif CT43_CH4428 PF13797 Post-transcriptional regulator CT43_CH4429 PF14667 Polysaccharide biosynthesis C-terminal domain CT43_CH4429 PF01943 Polysaccharide biosynthesis protein CT43_CH4430 PF04239 Protein of unknown function (DUF421) CT43_CH4432 PF02699 Preprotein translocase subunit CT43_CH4433 PF01702 Queuine tRNA-ribosyltransferase CT43_CH4434 PF02547 Queuosine biosynthesis protein CT43_CH4435 PF11146 Protein of unknown function (DUF2905) CT43_CH4436 PF05496 Holliday junction DNA helicase RuvB P-loop domain CT43_CH4436 PF05491 RuvB C-terminal winged helix domain CT43_CH4436 PF17864 RuvB AAA lid domain CT43_CH4437 PF07499 RuvA, C-terminal domain CT43_CH4437 PF01330 RuvA N terminal domain CT43_CH4438 PF01497 Periplasmic binding protein CT43_CH4442 PF01476 LysM domain CT43_CH4443 PF02445 Quinolinate synthetase A protein CT43_CH4444 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CT43_CH4444 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CT43_CH4445 PF00890 FAD binding domain CT43_CH4445 PF02910 Fumarate reductase flavoprotein C-term CT43_CH4446 PF00266 Aminotransferase class-V CT43_CH4447 PF02829 3H domain CT43_CH4447 PF08279 HTH domain CT43_CH4448 PF03475 3-alpha domain CT43_CH4448 PF03473 MOSC domain CT43_CH4449 PF00800 Prephenate dehydratase CT43_CH4449 PF01842 ACT domain CT43_CH4450 PF02687 FtsX-like permease family CT43_CH4451 PF02687 FtsX-like permease family CT43_CH4452 PF00005 ABC transporter CT43_CH4453 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4454 PF00072 Response regulator receiver domain CT43_CH4454 PF00486 Transcriptional regulatory protein, C terminal CT43_CH4455 PF09269 Domain of unknown function (DUF1967) CT43_CH4455 PF01018 GTP1/OBG CT43_CH4455 PF01926 50S ribosome-binding GTPase CT43_CH4456 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CT43_CH4456 PF14682 Sporulation initiation phospho-transferase B, C-terminal CT43_CH4457 PF01016 Ribosomal L27 protein CT43_CH4458 PF04327 Cysteine protease Prp CT43_CH4459 PF00829 Ribosomal prokaryotic L21 protein CT43_CH4460 PF10150 Ribonuclease E/G family CT43_CH4460 PF00575 S1 RNA binding domain CT43_CH4461 PF02163 Peptidase family M50 CT43_CH4462 PF01551 Peptidase family M23 CT43_CH4463 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CT43_CH4464 PF03775 Septum formation inhibitor MinC, C-terminal domain CT43_CH4466 PF04085 rod shape-determining protein MreC CT43_CH4468 PF04002 RadC-like JAB domain CT43_CH4469 PF02545 Maf-like protein CT43_CH4471 PF08245 Mur ligase middle domain CT43_CH4471 PF02875 Mur ligase family, glutamate ligase domain CT43_CH4472 PF10458 Valyl tRNA synthetase tRNA binding arm CT43_CH4472 PF08264 Anticodon-binding domain of tRNA CT43_CH4472 PF00133 tRNA synthetases class I (I, L, M and V) CT43_CH4474 PF01476 LysM domain CT43_CH4475 PF00202 Aminotransferase class-III CT43_CH4476 PF00490 Delta-aminolevulinic acid dehydratase CT43_CH4477 PF02602 Uroporphyrinogen-III synthase HemD CT43_CH4478 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CT43_CH4478 PF03900 Porphobilinogen deaminase, C-terminal domain CT43_CH4479 PF01578 Cytochrome C assembly protein CT43_CH4480 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CT43_CH4480 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CT43_CH4480 PF01488 Shikimate / quinate 5-dehydrogenase CT43_CH4481 PF01047 MarR family CT43_CH4482 PF02566 OsmC-like protein CT43_CH4483 PF01926 50S ribosome-binding GTPase CT43_CH4484 PF00004 ATPase family associated with various cellular activities (AAA) CT43_CH4484 PF05362 Lon protease (S16) C-terminal proteolytic domain CT43_CH4484 PF02190 ATP-dependent protease La (LON) substrate-binding domain CT43_CH4485 PF00004 ATPase family associated with various cellular activities (AAA) CT43_CH4485 PF05362 Lon protease (S16) C-terminal proteolytic domain CT43_CH4486 PF06689 ClpX C4-type zinc finger CT43_CH4486 PF10431 C-terminal, D2-small domain, of ClpB protein CT43_CH4486 PF07724 AAA domain (Cdc48 subfamily) CT43_CH4487 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CT43_CH4487 PF05698 Bacterial trigger factor protein (TF) C-terminus CT43_CH4487 PF05697 Bacterial trigger factor protein (TF) CT43_CH4490 PF11724 YvbH-like oligomerisation region CT43_CH4490 PF08000 Bacterial PH domain CT43_CH4503 PF02796 Helix-turn-helix domain of resolvase CT43_CH4503 PF00239 Resolvase, N terminal domain CT43_CH4505 PF07261 Replication initiation and membrane attachment CT43_CH4510 PF02899 Phage integrase, N-terminal SAM-like domain CT43_CH4510 PF00589 Phage integrase family CT43_CH4511 PF12850 Calcineurin-like phosphoesterase superfamily domain CT43_CH4512 PF01725 Ham1 family CT43_CH4513 PF03725 3' exoribonuclease family, domain 2 CT43_CH4513 PF01138 3' exoribonuclease family, domain 1 CT43_CH4514 PF10646 Sporulation and spore germination CT43_CH4515 PF01177 Asp/Glu/Hydantoin racemase CT43_CH4516 PF07690 Major Facilitator Superfamily CT43_CH4518 PF00440 Bacterial regulatory proteins, tetR family CT43_CH4520 PF00196 Bacterial regulatory proteins, luxR family CT43_CH4521 PF00860 Permease family CT43_CH4522 PF07969 Amidohydrolase family CT43_CH4523 PF04024 PspC domain CT43_CH4524 PF01381 Helix-turn-helix CT43_CH4524 PF07883 Cupin domain CT43_CH4525 PF13536 Putative multidrug resistance efflux transporter CT43_CH4526 PF00230 Major intrinsic protein CT43_CH4527 PF02082 Transcriptional regulator CT43_CH4529 PF00005 ABC transporter CT43_CH4529 PF13732 Domain of unknown function (DUF4162) CT43_CH4530 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CT43_CH4531 PF13677 Membrane MotB of proton-channel complex MotA/MotB CT43_CH4531 PF00691 OmpA family CT43_CH4532 PF01618 MotA/TolQ/ExbB proton channel family CT43_CH4533 PF02557 D-alanyl-D-alanine carboxypeptidase CT43_CH4534 PF03061 Thioesterase superfamily CT43_CH4535 PF13183 4Fe-4S dicluster domain CT43_CH4535 PF13085 2Fe-2S iron-sulfur cluster binding domain CT43_CH4536 PF02910 Fumarate reductase flavoprotein C-term CT43_CH4536 PF00890 FAD binding domain CT43_CH4537 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CT43_CH4538 PF10702 Protein of unknown function (DUF2507) CT43_CH4539 PF01541 GIY-YIG catalytic domain CT43_CH4539 PF02151 UvrB/uvrC motif CT43_CH4539 PF08459 UvrC Helix-hairpin-helix N-terminal CT43_CH4540 PF00085 Thioredoxin CT43_CH4541 PF00766 Electron transfer flavoprotein FAD-binding domain CT43_CH4541 PF01012 Electron transfer flavoprotein domain CT43_CH4542 PF01012 Electron transfer flavoprotein domain CT43_CH4543 PF00378 Enoyl-CoA hydratase/isomerase CT43_CH4544 PF08359 YsiA-like protein, C-terminal region CT43_CH4544 PF00440 Bacterial regulatory proteins, tetR family CT43_CH4545 PF13193 AMP-binding enzyme C-terminal domain CT43_CH4545 PF00501 AMP-binding enzyme CT43_CH4547 PF01497 Periplasmic binding protein CT43_CH4548 PF01032 FecCD transport family CT43_CH4550 PF05163 DinB family CT43_CH4556 PF00005 ABC transporter CT43_CH4557 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH4557 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4558 PF00486 Transcriptional regulatory protein, C terminal CT43_CH4558 PF00072 Response regulator receiver domain CT43_CH4560 PF09962 Uncharacterized conserved protein (DUF2196) CT43_CH4561 PF10672 S-adenosylmethionine-dependent methyltransferase CT43_CH4561 PF17785 PUA-like domain CT43_CH4562 PF03992 Antibiotic biosynthesis monooxygenase CT43_CH4563 PF04203 Sortase domain CT43_CH4564 PF00005 ABC transporter CT43_CH4565 PF01032 FecCD transport family CT43_CH4566 PF01497 Periplasmic binding protein CT43_CH4567 PF05031 Iron Transport-associated domain CT43_CH4569 PF05031 Iron Transport-associated domain CT43_CH4570 PF05525 Branched-chain amino acid transport protein CT43_CH4571 PF00849 RNA pseudouridylate synthase CT43_CH4571 PF01479 S4 domain CT43_CH4572 PF00488 MutS domain V CT43_CH4572 PF01713 Smr domain CT43_CH4573 PF14716 Helix-hairpin-helix domain CT43_CH4573 PF14791 DNA polymerase beta thumb CT43_CH4573 PF02811 PHP domain CT43_CH4574 PF02674 Colicin V production protein CT43_CH4575 PF05164 Cell division protein ZapA CT43_CH4576 PF11858 Domain of unknown function (DUF3378) CT43_CH4576 PF01351 Ribonuclease HII CT43_CH4578 PF01336 OB-fold nucleic acid binding domain CT43_CH4578 PF00152 tRNA synthetases class II (D, K and N) CT43_CH4579 PF03483 B3/4 domain CT43_CH4579 PF03484 tRNA synthetase B5 domain CT43_CH4579 PF01588 Putative tRNA binding domain CT43_CH4579 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CT43_CH4579 PF03147 Ferredoxin-fold anticodon binding domain CT43_CH4580 PF01409 tRNA synthetases class II core domain (F) CT43_CH4580 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CT43_CH4581 PF08032 RNA 2'-O ribose methyltransferase substrate binding CT43_CH4581 PF00588 SpoU rRNA Methylase family CT43_CH4582 PF14098 Small, acid-soluble spore protein I CT43_CH4583 PF01966 HD domain CT43_CH4587 PF07690 Major Facilitator Superfamily CT43_CH4589 PF16859 Tetracyclin repressor-like, C-terminal domain CT43_CH4589 PF00440 Bacterial regulatory proteins, tetR family CT43_CH4590 PF05343 M42 glutamyl aminopeptidase CT43_CH4592 PF00453 Ribosomal protein L20 CT43_CH4593 PF01632 Ribosomal protein L35 CT43_CH4594 PF00707 Translation initiation factor IF-3, C-terminal domain CT43_CH4594 PF05198 Translation initiation factor IF-3, N-terminal domain CT43_CH4595 PF02824 TGS domain CT43_CH4595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CT43_CH4595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CT43_CH4595 PF03129 Anticodon binding domain CT43_CH4596 PF08812 YtxC-like family CT43_CH4597 PF07319 Primosomal protein DnaI N-terminus CT43_CH4597 PF01695 IstB-like ATP binding protein CT43_CH4598 PF07261 Replication initiation and membrane attachment CT43_CH4599 PF03477 ATP cone domain CT43_CH4600 PF02675 S-adenosylmethionine decarboxylase CT43_CH4602 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CT43_CH4602 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CT43_CH4603 PF01121 Dephospho-CoA kinase CT43_CH4604 PF02659 Putative manganese efflux pump CT43_CH4605 PF06827 Zinc finger found in FPG and IleRS CT43_CH4605 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CT43_CH4605 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CT43_CH4606 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CT43_CH4606 PF01367 5'-3' exonuclease, C-terminal SAM fold CT43_CH4606 PF00476 DNA polymerase family A CT43_CH4607 PF00989 PAS fold CT43_CH4607 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH4607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4607 PF16736 Single Cache-like CT43_CH4608 PF00486 Transcriptional regulatory protein, C terminal CT43_CH4608 PF00072 Response regulator receiver domain CT43_CH4612 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CT43_CH4612 PF00056 lactate/malate dehydrogenase, NAD binding domain CT43_CH4613 PF00180 Isocitrate/isopropylmalate dehydrogenase CT43_CH4614 PF00285 Citrate synthase, C-terminal domain CT43_CH4615 PF04284 Protein of unknown function (DUF441) CT43_CH4616 PF01594 AI-2E family transporter CT43_CH4617 PF04186 FxsA cytoplasmic membrane protein CT43_CH4618 PF00391 PEP-utilising enzyme, mobile domain CT43_CH4618 PF00224 Pyruvate kinase, barrel domain CT43_CH4618 PF02887 Pyruvate kinase, alpha/beta domain CT43_CH4619 PF00365 Phosphofructokinase CT43_CH4620 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CT43_CH4621 PF17848 Acetyl-coA carboxylase zinc finger domain CT43_CH4621 PF01039 Carboxyl transferase domain CT43_CH4622 PF00392 Bacterial regulatory proteins, gntR family CT43_CH4623 PF03949 Malic enzyme, NAD binding domain CT43_CH4623 PF00390 Malic enzyme, N-terminal domain CT43_CH4624 PF02811 PHP domain CT43_CH4624 PF07733 Bacterial DNA polymerase III alpha NTPase domain CT43_CH4624 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CT43_CH4624 PF01336 OB-fold nucleic acid binding domain CT43_CH4624 PF14579 Helix-hairpin-helix motif CT43_CH4625 PF14034 Sporulation protein YtrH CT43_CH4627 PF01368 DHH family CT43_CH4627 PF02272 DHHA1 domain CT43_CH4628 PF14007 YtpI-like protein CT43_CH4631 PF00571 CBS domain CT43_CH4631 PF03061 Thioesterase superfamily CT43_CH4631 PF07085 DRTGG domain CT43_CH4631 PF00392 Bacterial regulatory proteins, gntR family CT43_CH4634 PF00557 Metallopeptidase family M24 CT43_CH4634 PF01321 Creatinase/Prolidase N-terminal domain CT43_CH4641 PF12746 GNAT acetyltransferase CT43_CH4642 PF07883 Cupin domain CT43_CH4644 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CT43_CH4644 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CT43_CH4646 PF00582 Universal stress protein family CT43_CH4650 PF14698 Argininosuccinate lyase C-terminal CT43_CH4650 PF00206 Lyase CT43_CH4651 PF00764 Arginosuccinate synthase CT43_CH4655 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH4655 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH4656 PF12787 EcsC protein family CT43_CH4659 PF00871 Acetokinase family CT43_CH4660 PF02384 N-6 DNA Methylase CT43_CH4661 PF08534 Redoxin CT43_CH4662 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CT43_CH4664 PF01513 ATP-NAD kinase CT43_CH4665 PF07969 Amidohydrolase family CT43_CH4667 PF13193 AMP-binding enzyme C-terminal domain CT43_CH4667 PF00501 AMP-binding enzyme CT43_CH4668 PF00269 Small, acid-soluble spore proteins, alpha/beta type CT43_CH4669 PF02568 Thiamine biosynthesis protein (ThiI) CT43_CH4669 PF02926 THUMP domain CT43_CH4670 PF00266 Aminotransferase class-V CT43_CH4671 PF06160 Septation ring formation regulator, EzrA CT43_CH4672 PF03466 LysR substrate binding domain CT43_CH4672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH4673 PF00892 EamA-like transporter family CT43_CH4674 PF00440 Bacterial regulatory proteins, tetR family CT43_CH4675 PF13185 GAF domain CT43_CH4676 PF01053 Cys/Met metabolism PLP-dependent enzyme CT43_CH4677 PF00163 Ribosomal protein S4/S9 N-terminal domain CT43_CH4677 PF01479 S4 domain CT43_CH4680 PF00579 tRNA synthetases class I (W and Y) CT43_CH4680 PF01479 S4 domain CT43_CH4682 PF04542 Sigma-70 region 2 CT43_CH4682 PF08281 Sigma-70, region 4 CT43_CH4684 PF14602 Hexapeptide repeat of succinyl-transferase CT43_CH4684 PF12464 Maltose acetyltransferase CT43_CH4685 PF13193 AMP-binding enzyme C-terminal domain CT43_CH4685 PF00501 AMP-binding enzyme CT43_CH4686 PF00583 Acetyltransferase (GNAT) family CT43_CH4687 PF00571 CBS domain CT43_CH4688 PF00850 Histone deacetylase domain CT43_CH4689 PF00561 alpha/beta hydrolase fold CT43_CH4691 PF00486 Transcriptional regulatory protein, C terminal CT43_CH4691 PF00072 Response regulator receiver domain CT43_CH4692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4692 PF16736 Single Cache-like CT43_CH4692 PF00989 PAS fold CT43_CH4692 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH4693 PF12796 Ankyrin repeats (3 copies) CT43_CH4694 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CT43_CH4695 PF01741 Large-conductance mechanosensitive channel, MscL CT43_CH4699 PF00356 Bacterial regulatory proteins, lacI family CT43_CH4701 PF07537 CamS sex pheromone cAM373 precursor CT43_CH4702 PF11009 Protein of unknown function (DUF2847) CT43_CH4704 PF02073 Thermophilic metalloprotease (M29) CT43_CH4707 PF13302 Acetyltransferase (GNAT) domain CT43_CH4708 PF00892 EamA-like transporter family CT43_CH4709 PF13411 MerR HTH family regulatory protein CT43_CH4710 PF08245 Mur ligase middle domain CT43_CH4710 PF02875 Mur ligase family, glutamate ligase domain CT43_CH4710 PF01225 Mur ligase family, catalytic domain CT43_CH4712 PF17854 FtsK alpha domain CT43_CH4712 PF09397 Ftsk gamma domain CT43_CH4712 PF01580 FtsK/SpoIIIE family CT43_CH4713 PF01520 N-acetylmuramoyl-L-alanine amidase CT43_CH4713 PF08239 Bacterial SH3 domain CT43_CH4715 PF14794 Domain of unknown function (DUF4479) CT43_CH4715 PF01588 Putative tRNA binding domain CT43_CH4716 PF07285 Protein of unknown function (DUF1444) CT43_CH4717 PF00085 Thioredoxin CT43_CH4718 PF01931 Protein of unknown function DUF84 CT43_CH4719 PF05343 M42 glutamyl aminopeptidase CT43_CH4721 PF00753 Metallo-beta-lactamase superfamily CT43_CH4722 PF02390 Putative methyltransferase CT43_CH4723 PF01636 Phosphotransferase enzyme family CT43_CH4724 PF00128 Alpha amylase, catalytic domain CT43_CH4724 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CT43_CH4724 PF17999 Pullulanase N1-terminal domain CT43_CH4725 PF02834 LigT like Phosphoesterase CT43_CH4726 PF01546 Peptidase family M20/M25/M40 CT43_CH4727 PF08220 DeoR-like helix-turn-helix domain CT43_CH4728 PF01479 S4 domain CT43_CH4728 PF00849 RNA pseudouridylate synthase CT43_CH4729 PF14667 Polysaccharide biosynthesis C-terminal domain CT43_CH4729 PF01943 Polysaccharide biosynthesis protein CT43_CH4731 PF07690 Major Facilitator Superfamily CT43_CH4732 PF01022 Bacterial regulatory protein, arsR family CT43_CH4733 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CT43_CH4735 PF10957 Sporulation protein Cse60 CT43_CH4737 PF02559 CarD-like/TRCF domain CT43_CH4739 PF06800 Sugar transport protein CT43_CH4742 PF02391 MoaE protein CT43_CH4743 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CT43_CH4744 PF00994 Probable molybdopterin binding domain CT43_CH4744 PF03453 MoeA N-terminal region (domain I and II) CT43_CH4744 PF03454 MoeA C-terminal region (domain IV) CT43_CH4745 PF01967 MoaC family CT43_CH4746 PF00899 ThiF family CT43_CH4747 PF06463 Molybdenum Cofactor Synthesis C CT43_CH4747 PF04055 Radical SAM superfamily CT43_CH4751 PF00581 Rhodanese-like domain CT43_CH4753 PF00561 alpha/beta hydrolase fold CT43_CH4754 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH4754 PF03323 Bacillus/Clostridium GerA spore germination protein CT43_CH4755 PF03845 Spore germination protein CT43_CH4760 PF09334 tRNA synthetases class I (M) CT43_CH4760 PF13603 Leucyl-tRNA synthetase, Domain 2 CT43_CH4760 PF00133 tRNA synthetases class I (I, L, M and V) CT43_CH4760 PF08264 Anticodon-binding domain of tRNA CT43_CH4761 PF07690 Major Facilitator Superfamily CT43_CH4762 PF00999 Sodium/hydrogen exchanger family CT43_CH4763 PF02080 TrkA-C domain CT43_CH4764 PF00589 Phage integrase family CT43_CH4766 PF00005 ABC transporter CT43_CH4767 PF07786 Protein of unknown function (DUF1624) CT43_CH4767 PF04235 Protein of unknown function (DUF418) CT43_CH4768 PF12323 Helix-turn-helix domain CT43_CH4768 PF01385 Probable transposase CT43_CH4768 PF07282 Putative transposase DNA-binding domain CT43_CH4771 PF10732 Protein of unknown function (DUF2524) CT43_CH4772 PF04055 Radical SAM superfamily CT43_CH4772 PF16199 Radical_SAM C-terminal domain CT43_CH4773 PF06962 Putative rRNA methylase CT43_CH4774 PF13732 Domain of unknown function (DUF4162) CT43_CH4774 PF00005 ABC transporter CT43_CH4776 PF01177 Asp/Glu/Hydantoin racemase CT43_CH4779 PF10776 Protein of unknown function (DUF2600) CT43_CH4780 PF12146 Serine aminopeptidase, S33 CT43_CH4781 PF00132 Bacterial transferase hexapeptide (six repeats) CT43_CH4782 PF01569 PAP2 superfamily CT43_CH4783 PF00534 Glycosyl transferases group 1 CT43_CH4783 PF13439 Glycosyltransferase Family 4 CT43_CH4784 PF12804 MobA-like NTP transferase domain CT43_CH4785 PF00994 Probable molybdopterin binding domain CT43_CH4787 PF00438 S-adenosylmethionine synthetase, N-terminal domain CT43_CH4787 PF02772 S-adenosylmethionine synthetase, central domain CT43_CH4787 PF02773 S-adenosylmethionine synthetase, C-terminal domain CT43_CH4788 PF01293 Phosphoenolpyruvate carboxykinase CT43_CH4800 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH4800 PF00989 PAS fold CT43_CH4800 PF13188 PAS domain CT43_CH4800 PF13426 PAS domain CT43_CH4800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4801 PF02743 Cache domain CT43_CH4801 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4801 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH4803 PF08386 TAP-like protein CT43_CH4803 PF00561 alpha/beta hydrolase fold CT43_CH4804 PF00884 Sulfatase CT43_CH4809 PF00005 ABC transporter CT43_CH4810 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH4813 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH4815 PF00293 NUDIX domain CT43_CH4819 PF00893 Small Multidrug Resistance protein CT43_CH4820 PF00893 Small Multidrug Resistance protein CT43_CH4821 PF09278 MerR, DNA binding CT43_CH4821 PF00376 MerR family regulatory protein CT43_CH4822 PF02664 S-Ribosylhomocysteinase (LuxS) CT43_CH4823 PF00484 Carbonic anhydrase CT43_CH4824 PF01654 Cytochrome bd terminal oxidase subunit I CT43_CH4825 PF02322 Cytochrome bd terminal oxidase subunit II CT43_CH4826 PF10676 Spore germination protein gerPA/gerPF CT43_CH4828 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH4828 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH4832 PF04012 PspA/IM30 family CT43_CH4835 PF07670 Nucleoside recognition CT43_CH4835 PF07664 Ferrous iron transport protein B C terminus CT43_CH4835 PF02421 Ferrous iron transport protein B CT43_CH4835 PF17910 FeoB cytosolic helical domain CT43_CH4837 PF09515 Thiamine transporter protein (Thia_YuaJ) CT43_CH4838 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4838 PF00672 HAMP domain CT43_CH4838 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH4839 PF00486 Transcriptional regulatory protein, C terminal CT43_CH4839 PF00072 Response regulator receiver domain CT43_CH4845 PF00781 Diacylglycerol kinase catalytic domain CT43_CH4847 PF02687 FtsX-like permease family CT43_CH4848 PF00005 ABC transporter CT43_CH4850 PF09335 SNARE associated Golgi protein CT43_CH4851 PF00398 Ribosomal RNA adenine dimethylase CT43_CH4852 PF02687 FtsX-like permease family CT43_CH4853 PF00005 ABC transporter CT43_CH4854 PF12833 Helix-turn-helix domain CT43_CH4854 PF06445 GyrI-like small molecule binding domain CT43_CH4856 PF07853 Protein of unknown function (DUF1648) CT43_CH4856 PF13630 SdpI/YhfL protein family CT43_CH4857 PF01022 Bacterial regulatory protein, arsR family CT43_CH4858 PF00486 Transcriptional regulatory protein, C terminal CT43_CH4858 PF00072 Response regulator receiver domain CT43_CH4859 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4860 PF02687 FtsX-like permease family CT43_CH4861 PF02687 FtsX-like permease family CT43_CH4862 PF00005 ABC transporter CT43_CH4863 PF02687 FtsX-like permease family CT43_CH4865 PF00440 Bacterial regulatory proteins, tetR family CT43_CH4865 PF13977 BetI-type transcriptional repressor, C-terminal CT43_CH4867 PF02447 GntP family permease CT43_CH4870 PF07071 KDGP aldolase CT43_CH4871 PF03841 L-seryl-tRNA selenium transferase CT43_CH4872 PF01979 Amidohydrolase family CT43_CH4873 PF02557 D-alanyl-D-alanine carboxypeptidase CT43_CH4874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH4874 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH4875 PF00486 Transcriptional regulatory protein, C terminal CT43_CH4875 PF00072 Response regulator receiver domain CT43_CH4876 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CT43_CH4876 PF13378 Enolase C-terminal domain-like CT43_CH4877 PF13193 AMP-binding enzyme C-terminal domain CT43_CH4877 PF00501 AMP-binding enzyme CT43_CH4878 PF00378 Enoyl-CoA hydratase/isomerase CT43_CH4879 PF00561 alpha/beta hydrolase fold CT43_CH4880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CT43_CH4880 PF16582 Middle domain of thiamine pyrophosphate CT43_CH4880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CT43_CH4881 PF00425 chorismate binding enzyme CT43_CH4882 PF01040 UbiA prenyltransferase family CT43_CH4883 PF01258 Prokaryotic dksA/traR C4-type zinc finger CT43_CH4884 PF00313 'Cold-shock' DNA-binding domain CT43_CH4889 PF00343 Carbohydrate phosphorylase CT43_CH4890 PF08323 Starch synthase catalytic domain CT43_CH4890 PF00534 Glycosyl transferases group 1 CT43_CH4891 PF00483 Nucleotidyl transferase CT43_CH4892 PF00483 Nucleotidyl transferase CT43_CH4893 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CT43_CH4893 PF00128 Alpha amylase, catalytic domain CT43_CH4893 PF02806 Alpha amylase, C-terminal all-beta domain CT43_CH4895 PF05922 Peptidase inhibitor I9 CT43_CH4895 PF13860 FlgD Ig-like domain CT43_CH4895 PF02225 PA domain CT43_CH4895 PF00082 Subtilase family CT43_CH4897 PF00056 lactate/malate dehydrogenase, NAD binding domain CT43_CH4897 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CT43_CH4898 PF02308 MgtC family CT43_CH4899 PF07885 Ion channel CT43_CH4899 PF02254 TrkA-N domain CT43_CH4900 PF08868 YugN-like family CT43_CH4901 PF00342 Phosphoglucose isomerase CT43_CH4902 PF04070 Domain of unknown function (DUF378) CT43_CH4903 PF00575 S1 RNA binding domain CT43_CH4904 PF00155 Aminotransferase class I and II CT43_CH4905 PF01037 Lrp/AsnC ligand binding domain CT43_CH4906 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CT43_CH4906 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CT43_CH4907 PF08386 TAP-like protein CT43_CH4907 PF00561 alpha/beta hydrolase fold CT43_CH4909 PF00155 Aminotransferase class I and II CT43_CH4912 PF08810 Kinase associated protein B CT43_CH4913 PF00929 Exonuclease CT43_CH4914 PF03600 Citrate transporter CT43_CH4917 PF03129 Anticodon binding domain CT43_CH4917 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CT43_CH4918 PF03061 Thioesterase superfamily CT43_CH4920 PF02632 BioY family CT43_CH4921 PF00483 Nucleotidyl transferase CT43_CH4922 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CT43_CH4922 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CT43_CH4922 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CT43_CH4922 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CT43_CH4923 PF10372 Bacterial membrane-spanning protein N-terminus CT43_CH4923 PF02457 DisA bacterial checkpoint controller nucleotide-binding CT43_CH4926 PF00892 EamA-like transporter family CT43_CH4927 PF01040 UbiA prenyltransferase family CT43_CH4928 PF00883 Cytosol aminopeptidase family, catalytic domain CT43_CH4928 PF02789 Cytosol aminopeptidase family, N-terminal domain CT43_CH4929 PF06725 3D domain CT43_CH4931 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH4931 PF00293 NUDIX domain CT43_CH4932 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH4933 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH4935 PF06445 GyrI-like small molecule binding domain CT43_CH4938 PF04463 Protein of unknown function (DUF523) CT43_CH4948 PF12123 N-acetylmuramoyl-l-alanine amidase CT43_CH4948 PF01510 N-acetylmuramoyl-L-alanine amidase CT43_CH4949 PF05105 Bacteriophage holin family CT43_CH4950 PF10779 Haemolysin XhlA CT43_CH4975 PF04545 Sigma-70, region 4 CT43_CH4975 PF04542 Sigma-70 region 2 CT43_CH4975 PF04539 Sigma-70 region 3 CT43_CH4980 PF09669 Phage regulatory protein Rha (Phage_pRha) CT43_CH4980 PF03374 Phage antirepressor protein KilAC domain CT43_CH4985 PF01381 Helix-turn-helix CT43_CH4995 PF01521 Iron-sulphur cluster biosynthesis CT43_CH4996 PF01678 Diaminopimelate epimerase CT43_CH4997 PF07293 Protein of unknown function (DUF1450) CT43_CH4998 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH5000 PF03412 Peptidase C39 family CT43_CH5000 PF00005 ABC transporter CT43_CH5000 PF00664 ABC transporter transmembrane region CT43_CH5001 PF03649 Uncharacterised protein family (UPF0014) CT43_CH5002 PF08274 PhnA Zinc-Ribbon CT43_CH5002 PF03831 PhnA domain CT43_CH5007 PF07315 Protein of unknown function (DUF1462) CT43_CH5008 PF01106 NifU-like domain CT43_CH5011 PF04608 Phosphatidylglycerophosphatase A CT43_CH5015 PF11202 Phosphoribosyl transferase (PRTase) CT43_CH5015 PF15608 PELOTA RNA binding domain CT43_CH5017 PF02525 Flavodoxin-like fold CT43_CH5018 PF13344 Haloacid dehalogenase-like hydrolase CT43_CH5020 PF01934 Protein of unknown function DUF86 CT43_CH5021 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CT43_CH5025 PF06265 Protein of unknown function (DUF1027) CT43_CH5026 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CT43_CH5027 PF13411 MerR HTH family regulatory protein CT43_CH5027 PF07739 TipAS antibiotic-recognition domain CT43_CH5028 PF10086 YhfC intramembrane metalloprotease CT43_CH5032 PF04055 Radical SAM superfamily CT43_CH5032 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CT43_CH5033 PF01551 Peptidase family M23 CT43_CH5034 PF09560 Sporulation protein YunB (Spo_YunB) CT43_CH5035 PF08827 Domain of unknown function (DUF1805) CT43_CH5036 PF02872 5'-nucleotidase, C-terminal domain CT43_CH5037 PF01458 Uncharacterized protein family (UPF0051) CT43_CH5038 PF01592 NifU-like N terminal domain CT43_CH5039 PF00266 Aminotransferase class-V CT43_CH5040 PF01458 Uncharacterized protein family (UPF0051) CT43_CH5041 PF00005 ABC transporter CT43_CH5042 PF03180 NLPA lipoprotein CT43_CH5043 PF03180 NLPA lipoprotein CT43_CH5044 PF00528 Binding-protein-dependent transport system inner membrane component CT43_CH5045 PF09383 NIL domain CT43_CH5045 PF00005 ABC transporter CT43_CH5047 PF00085 Thioredoxin CT43_CH5048 PF01751 Toprim domain CT43_CH5049 PF01597 Glycine cleavage H-protein CT43_CH5050 PF03960 ArsC family CT43_CH5058 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CT43_CH5058 PF00056 lactate/malate dehydrogenase, NAD binding domain CT43_CH5063 PF13305 Tetracyclin repressor-like, C-terminal domain CT43_CH5063 PF00440 Bacterial regulatory proteins, tetR family CT43_CH5064 PF00753 Metallo-beta-lactamase superfamily CT43_CH5065 PF02770 Acyl-CoA dehydrogenase, middle domain CT43_CH5065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CT43_CH5065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CT43_CH5066 PF02803 Thiolase, C-terminal domain CT43_CH5066 PF00108 Thiolase, N-terminal domain CT43_CH5067 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CT43_CH5067 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CT43_CH5067 PF00378 Enoyl-CoA hydratase/isomerase CT43_CH5068 PF14115 YuzL-like protein CT43_CH5069 PF07943 Penicillin-binding protein 5, C-terminal domain CT43_CH5069 PF00768 D-alanyl-D-alanine carboxypeptidase CT43_CH5070 PF01619 Proline dehydrogenase CT43_CH5071 PF10835 Protein of unknown function (DUF2573) CT43_CH5072 PF01910 Thiamine-binding protein CT43_CH5073 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH5073 PF02743 Cache domain CT43_CH5073 PF00672 HAMP domain CT43_CH5075 PF07690 Major Facilitator Superfamily CT43_CH5076 PF13520 Amino acid permease CT43_CH5080 PF02096 60Kd inner membrane protein CT43_CH5082 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_CH5082 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_CH5089 PF09335 SNARE associated Golgi protein CT43_CH5091 PF17969 L,D-transpeptidase C-terminal domain CT43_CH5091 PF03734 L,D-transpeptidase catalytic domain CT43_CH5092 PF00486 Transcriptional regulatory protein, C terminal CT43_CH5092 PF00072 Response regulator receiver domain CT43_CH5093 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH5093 PF16736 Single Cache-like CT43_CH5093 PF00989 PAS fold CT43_CH5093 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH5096 PF09334 tRNA synthetases class I (M) CT43_CH5096 PF08264 Anticodon-binding domain of tRNA CT43_CH5098 PF01609 Transposase DDE domain CT43_CH5099 PF02743 Cache domain CT43_CH5099 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH5099 PF00672 HAMP domain CT43_CH5100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH5100 PF00672 HAMP domain CT43_CH5100 PF02743 Cache domain CT43_CH5101 PF01883 Iron-sulfur cluster assembly protein CT43_CH5102 PF07504 Fungalysin/Thermolysin Propeptide Motif CT43_CH5102 PF01447 Thermolysin metallopeptidase, catalytic domain CT43_CH5102 PF02868 Thermolysin metallopeptidase, alpha-helical domain CT43_CH5102 PF03413 Peptidase propeptide and YPEB domain CT43_CH5103 PF17954 Quercetinase C-terminal cupin domain CT43_CH5103 PF02678 Pirin CT43_CH5104 PF01047 MarR family CT43_CH5106 PF09335 SNARE associated Golgi protein CT43_CH5107 PF00999 Sodium/hydrogen exchanger family CT43_CH5108 PF02080 TrkA-C domain CT43_CH5109 PF01235 Sodium:alanine symporter family CT43_CH5110 PF00210 Ferritin-like domain CT43_CH5112 PF05163 DinB family CT43_CH5114 PF03641 Possible lysine decarboxylase CT43_CH5116 PF00210 Ferritin-like domain CT43_CH5117 PF07786 Protein of unknown function (DUF1624) CT43_CH5117 PF04235 Protein of unknown function (DUF418) CT43_CH5118 PF01773 Na+ dependent nucleoside transporter N-terminus CT43_CH5118 PF07662 Na+ dependent nucleoside transporter C-terminus CT43_CH5119 PF07662 Na+ dependent nucleoside transporter C-terminus CT43_CH5119 PF01773 Na+ dependent nucleoside transporter N-terminus CT43_CH5121 PF01235 Sodium:alanine symporter family CT43_CH5122 PF01235 Sodium:alanine symporter family CT43_CH5123 PF13460 NAD(P)H-binding CT43_CH5126 PF00248 Aldo/keto reductase family CT43_CH5127 PF07690 Major Facilitator Superfamily CT43_CH5128 PF01638 HxlR-like helix-turn-helix CT43_CH5129 PF07849 Protein of unknown function (DUF1641) CT43_CH5130 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH5131 PF00579 tRNA synthetases class I (W and Y) CT43_CH5131 PF01479 S4 domain CT43_CH5132 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CT43_CH5132 PF01565 FAD binding domain CT43_CH5137 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CT43_CH5138 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CT43_CH5141 PF13302 Acetyltransferase (GNAT) domain CT43_CH5142 PF06146 Phosphate-starvation-inducible E CT43_CH5144 PF00857 Isochorismatase family CT43_CH5145 PF01037 Lrp/AsnC ligand binding domain CT43_CH5149 PF01289 Thiol-activated cytolysin CT43_CH5149 PF17440 Thiol-activated cytolysin beta sandwich domain CT43_CH5150 PF00005 ABC transporter CT43_CH5151 PF01032 FecCD transport family CT43_CH5152 PF01032 FecCD transport family CT43_CH5154 PF00486 Transcriptional regulatory protein, C terminal CT43_CH5154 PF00072 Response regulator receiver domain CT43_CH5156 PF01668 SmpB protein CT43_CH5157 PF00773 RNB domain CT43_CH5157 PF00575 S1 RNA binding domain CT43_CH5157 PF08206 Ribonuclease B OB domain CT43_CH5157 PF17876 Cold shock domain CT43_CH5158 PF12146 Serine aminopeptidase, S33 CT43_CH5159 PF03840 Preprotein translocase SecG subunit CT43_CH5160 PF04172 LrgB-like family CT43_CH5161 PF03788 LrgA family CT43_CH5162 PF01156 Inosine-uridine preferring nucleoside hydrolase CT43_CH5163 PF03952 Enolase, N-terminal domain CT43_CH5163 PF00113 Enolase, C-terminal TIM barrel domain CT43_CH5164 PF01676 Metalloenzyme superfamily CT43_CH5164 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CT43_CH5165 PF00121 Triosephosphate isomerase CT43_CH5166 PF00162 Phosphoglycerate kinase CT43_CH5167 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CT43_CH5167 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CT43_CH5168 PF04198 Putative sugar-binding domain CT43_CH5170 PF00309 Sigma-54 factor, Activator interacting domain (AID) CT43_CH5170 PF04552 Sigma-54, DNA binding domain CT43_CH5170 PF04963 Sigma-54 factor, core binding domain CT43_CH5173 PF07730 Histidine kinase CT43_CH5173 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH5174 PF00072 Response regulator receiver domain CT43_CH5174 PF00196 Bacterial regulatory proteins, luxR family CT43_CH5177 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CT43_CH5178 PF07451 Stage V sporulation protein AD (SpoVAD) CT43_CH5179 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CT43_CH5181 PF04239 Protein of unknown function (DUF421) CT43_CH5182 PF00574 Clp protease CT43_CH5183 PF00381 PTS HPr component phosphorylation site CT43_CH5184 PF02650 WhiA C-terminal HTH domain CT43_CH5184 PF14527 WhiA LAGLIDADG-like domain CT43_CH5184 PF10298 WhiA N-terminal LAGLIDADG-like domain CT43_CH5185 PF01933 Uncharacterised protein family UPF0052 CT43_CH5186 PF03668 P-loop ATPase protein family CT43_CH5187 PF00293 NUDIX domain CT43_CH5189 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT43_CH5191 PF14602 Hexapeptide repeat of succinyl-transferase CT43_CH5192 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH5193 PF01790 Prolipoprotein diacylglyceryl transferase CT43_CH5194 PF07475 HPr Serine kinase C-terminal domain CT43_CH5194 PF02603 HPr Serine kinase N terminus CT43_CH5195 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CT43_CH5197 PF17760 UvrA interaction domain CT43_CH5197 PF17755 UvrA DNA-binding domain CT43_CH5197 PF00005 ABC transporter CT43_CH5198 PF12344 Ultra-violet resistance protein B CT43_CH5198 PF04851 Type III restriction enzyme, res subunit CT43_CH5198 PF17757 UvrB interaction domain CT43_CH5198 PF02151 UvrB/uvrC motif CT43_CH5198 PF00271 Helicase conserved C-terminal domain CT43_CH5201 PF07739 TipAS antibiotic-recognition domain CT43_CH5201 PF13411 MerR HTH family regulatory protein CT43_CH5204 PF03601 Conserved hypothetical protein 698 CT43_CH5205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH5205 PF03466 LysR substrate binding domain CT43_CH5206 PF09278 MerR, DNA binding CT43_CH5206 PF00376 MerR family regulatory protein CT43_CH5207 PF03358 NADPH-dependent FMN reductase CT43_CH5208 PF01906 Putative heavy-metal-binding CT43_CH5209 PF00005 ABC transporter CT43_CH5209 PF00664 ABC transporter transmembrane region CT43_CH5210 PF17820 PDZ domain CT43_CH5211 PF01471 Putative peptidoglycan binding domain CT43_CH5211 PF03572 Peptidase family S41 CT43_CH5211 PF17820 PDZ domain CT43_CH5212 PF18075 FtsX extracellular domain CT43_CH5212 PF02687 FtsX-like permease family CT43_CH5213 PF00005 ABC transporter CT43_CH5214 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CT43_CH5216 PF07517 SecA DEAD-like domain CT43_CH5216 PF07516 SecA Wing and Scaffold domain CT43_CH5216 PF02810 SEC-C motif CT43_CH5216 PF01043 SecA preprotein cross-linking domain CT43_CH5216 PF00271 Helicase conserved C-terminal domain CT43_CH5217 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CT43_CH5217 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CT43_CH5219 PF00313 'Cold-shock' DNA-binding domain CT43_CH5221 PF04851 Type III restriction enzyme, res subunit CT43_CH5221 PF00271 Helicase conserved C-terminal domain CT43_CH5222 PF00877 NlpC/P60 family CT43_CH5222 PF01476 LysM domain CT43_CH5223 PF01638 HxlR-like helix-turn-helix CT43_CH5224 PF02645 Uncharacterised protein, DegV family COG1307 CT43_CH5225 PF09186 Domain of unknown function (DUF1949) CT43_CH5225 PF01205 Uncharacterized protein family UPF0029 CT43_CH5226 PF03816 Cell envelope-related transcriptional attenuator domain CT43_CH5227 PF02350 UDP-N-acetylglucosamine 2-epimerase CT43_CH5228 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CT43_CH5228 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CT43_CH5228 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CT43_CH5229 PF00953 Glycosyl transferase family 4 CT43_CH5231 PF03610 PTS system fructose IIA component CT43_CH5231 PF00874 PRD domain CT43_CH5231 PF00158 Sigma-54 interaction domain CT43_CH5233 PF02417 Chromate transporter CT43_CH5234 PF04794 YdjC-like protein CT43_CH5235 PF11975 Family 4 glycosyl hydrolase C-terminal domain CT43_CH5235 PF02056 Family 4 glycosyl hydrolase CT43_CH5236 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CT43_CH5237 PF02378 Phosphotransferase system, EIIC CT43_CH5238 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CT43_CH5240 PF02675 S-adenosylmethionine decarboxylase CT43_CH5241 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CT43_CH5242 PF02378 Phosphotransferase system, EIIC CT43_CH5243 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CT43_CH5244 PF00375 Sodium:dicarboxylate symporter family CT43_CH5248 PF03466 LysR substrate binding domain CT43_CH5248 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_CH5251 PF01654 Cytochrome bd terminal oxidase subunit I CT43_CH5252 PF02322 Cytochrome bd terminal oxidase subunit II CT43_CH5253 PF02040 Arsenical pump membrane protein CT43_CH5254 PF13667 ThiC-associated domain CT43_CH5254 PF01964 Radical SAM ThiC family CT43_CH5256 PF02652 L-lactate permease CT43_CH5258 PF09988 Uncharacterized metal-binding protein (DUF2227) CT43_CH5260 PF00884 Sulfatase CT43_CH5262 PF01063 Amino-transferase class IV CT43_CH5264 PF00877 NlpC/P60 family CT43_CH5264 PF01476 LysM domain CT43_CH5266 PF07662 Na+ dependent nucleoside transporter C-terminus CT43_CH5266 PF01773 Na+ dependent nucleoside transporter N-terminus CT43_CH5270 PF02028 BCCT, betaine/carnitine/choline family transporter CT43_CH5271 PF06725 3D domain CT43_CH5271 PF01476 LysM domain CT43_CH5276 PF04434 SWIM zinc finger CT43_CH5277 PF00271 Helicase conserved C-terminal domain CT43_CH5277 PF00176 SNF2 family N-terminal domain CT43_CH5277 PF12419 SNF2 Helicase protein CT43_CH5279 PF02371 Transposase IS116/IS110/IS902 family CT43_CH5279 PF01548 Transposase CT43_CH5284 PF04542 Sigma-70 region 2 CT43_CH5284 PF04545 Sigma-70, region 4 CT43_CH5285 PF04893 Yip1 domain CT43_CH5286 PF02687 FtsX-like permease family CT43_CH5286 PF12704 MacB-like periplasmic core domain CT43_CH5287 PF00005 ABC transporter CT43_CH5291 PF07690 Major Facilitator Superfamily CT43_CH5294 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH5294 PF00989 PAS fold CT43_CH5294 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH5294 PF16736 Single Cache-like CT43_CH5295 PF00486 Transcriptional regulatory protein, C terminal CT43_CH5295 PF00072 Response regulator receiver domain CT43_CH5296 PF01238 Phosphomannose isomerase type I CT43_CH5297 PF02378 Phosphotransferase system, EIIC CT43_CH5297 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CT43_CH5297 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CT43_CH5298 PF00874 PRD domain CT43_CH5298 PF05043 Mga helix-turn-helix domain CT43_CH5298 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CT43_CH5298 PF08279 HTH domain CT43_CH5299 PF16363 GDP-mannose 4,6 dehydratase CT43_CH5301 PF03816 Cell envelope-related transcriptional attenuator domain CT43_CH5302 PF01238 Phosphomannose isomerase type I CT43_CH5303 PF01050 Mannose-6-phosphate isomerase CT43_CH5303 PF00483 Nucleotidyl transferase CT43_CH5305 PF00534 Glycosyl transferases group 1 CT43_CH5308 PF00534 Glycosyl transferases group 1 CT43_CH5308 PF13439 Glycosyltransferase Family 4 CT43_CH5309 PF12464 Maltose acetyltransferase CT43_CH5309 PF00132 Bacterial transferase hexapeptide (six repeats) CT43_CH5311 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CT43_CH5311 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CT43_CH5311 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CT43_CH5312 PF02397 Bacterial sugar transferase CT43_CH5313 PF00483 Nucleotidyl transferase CT43_CH5315 PF13614 AAA domain CT43_CH5316 PF02706 Chain length determinant protein CT43_CH5316 PF13807 G-rich domain on putative tyrosine kinase CT43_CH5317 PF13614 AAA domain CT43_CH5318 PF07977 FabA-like domain CT43_CH5320 PF12116 Stage III sporulation protein D CT43_CH5322 PF01551 Peptidase family M23 CT43_CH5324 PF00005 ABC transporter CT43_CH5325 PF00072 Response regulator receiver domain CT43_CH5325 PF04397 LytTr DNA-binding domain CT43_CH5326 PF08486 Stage II sporulation protein CT43_CH5327 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CT43_CH5329 PF06612 Protein of unknown function (DUF1146) CT43_CH5330 PF00361 Proton-conducting membrane transporter CT43_CH5331 PF00361 Proton-conducting membrane transporter CT43_CH5332 PF00361 Proton-conducting membrane transporter CT43_CH5332 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CT43_CH5332 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CT43_CH5333 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CT43_CH5334 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CT43_CH5336 PF00146 NADH dehydrogenase CT43_CH5337 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CT43_CH5338 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CT43_CH5339 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CT43_CH5340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CT43_CH5341 PF00563 EAL domain CT43_CH5341 PF00990 Diguanylate cyclase, GGDEF domain CT43_CH5341 PF03707 Bacterial signalling protein N terminal repeat CT43_CH5344 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CT43_CH5344 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CT43_CH5345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CT43_CH5345 PF02874 ATP synthase alpha/beta family, beta-barrel domain CT43_CH5346 PF00231 ATP synthase CT43_CH5347 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CT43_CH5347 PF00306 ATP synthase alpha/beta chain, C terminal domain CT43_CH5347 PF02874 ATP synthase alpha/beta family, beta-barrel domain CT43_CH5348 PF00213 ATP synthase delta (OSCP) subunit CT43_CH5349 PF00430 ATP synthase B/B' CF(0) CT43_CH5350 PF00137 ATP synthase subunit C CT43_CH5351 PF00119 ATP synthase A chain CT43_CH5352 PF03899 ATP synthase I chain CT43_CH5356 PF00464 Serine hydroxymethyltransferase CT43_CH5357 PF04260 Protein of unknown function (DUF436) CT43_CH5358 PF02502 Ribose/Galactose Isomerase CT43_CH5359 PF01451 Low molecular weight phosphotyrosine protein phosphatase CT43_CH5360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CT43_CH5361 PF07681 DoxX CT43_CH5362 PF01613 Flavin reductase like domain CT43_CH5364 PF02659 Putative manganese efflux pump CT43_CH5365 PF01300 Telomere recombination CT43_CH5365 PF03481 Putative GTP-binding controlling metal-binding CT43_CH5367 PF09551 Stage II sporulation protein R (spore_II_R) CT43_CH5368 PF13847 Methyltransferase domain CT43_CH5368 PF17827 PrmC N-terminal domain CT43_CH5369 PF00472 RF-1 domain CT43_CH5369 PF03462 PCRF domain CT43_CH5370 PF00265 Thymidine kinase CT43_CH5371 PF01197 Ribosomal protein L31 CT43_CH5372 PF07498 Rho termination factor, N-terminal domain CT43_CH5372 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CT43_CH5372 PF07497 Rho termination factor, RNA-binding domain CT43_CH5373 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CT43_CH5374 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CT43_CH5375 PF01116 Fructose-bisphosphate aldolase class-II CT43_CH5376 PF00072 Response regulator receiver domain CT43_CH5377 PF10740 Domain of unknown function (DUF2529) CT43_CH5378 PF06418 CTP synthase N-terminus CT43_CH5378 PF00117 Glutamine amidotransferase class-I CT43_CH5379 PF05066 HB1, ASXL, restriction endonuclease HTH domain CT43_CH5381 PF02770 Acyl-CoA dehydrogenase, middle domain CT43_CH5381 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CT43_CH5381 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CT43_CH5382 PF02770 Acyl-CoA dehydrogenase, middle domain CT43_CH5382 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CT43_CH5382 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CT43_CH5383 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CT43_CH5383 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CT43_CH5384 PF00108 Thiolase, N-terminal domain CT43_CH5384 PF02803 Thiolase, C-terminal domain CT43_CH5385 PF02754 Cysteine-rich domain CT43_CH5385 PF13183 4Fe-4S dicluster domain CT43_CH5386 PF13091 PLD-like domain CT43_CH5387 PF03851 UV-endonuclease UvdE CT43_CH5388 PF00563 EAL domain CT43_CH5388 PF03707 Bacterial signalling protein N terminal repeat CT43_CH5388 PF00990 Diguanylate cyclase, GGDEF domain CT43_CH5391 PF02868 Thermolysin metallopeptidase, alpha-helical domain CT43_CH5391 PF03413 Peptidase propeptide and YPEB domain CT43_CH5391 PF07504 Fungalysin/Thermolysin Propeptide Motif CT43_CH5391 PF01447 Thermolysin metallopeptidase, catalytic domain CT43_CH5392 PF00072 Response regulator receiver domain CT43_CH5392 PF00196 Bacterial regulatory proteins, luxR family CT43_CH5393 PF07730 Histidine kinase CT43_CH5393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH5395 PF00005 ABC transporter CT43_CH5396 PF00557 Metallopeptidase family M24 CT43_CH5398 PF04389 Peptidase family M28 CT43_CH5398 PF02225 PA domain CT43_CH5402 PF04542 Sigma-70 region 2 CT43_CH5402 PF08281 Sigma-70, region 4 CT43_CH5403 PF05746 DALR anticodon binding domain CT43_CH5403 PF03485 Arginyl tRNA synthetase N terminal domain CT43_CH5403 PF00750 tRNA synthetases class I (R) CT43_CH5404 PF09148 Domain of unknown function (DUF1934) CT43_CH5405 PF02016 LD-carboxypeptidase N-terminal domain CT43_CH5405 PF17676 LD-carboxypeptidase C-terminal domain CT43_CH5409 PF00491 Arginase family CT43_CH5410 PF17284 Spermidine synthase tetramerisation domain CT43_CH5411 PF07690 Major Facilitator Superfamily CT43_CH5412 PF13411 MerR HTH family regulatory protein CT43_CH5414 PF03009 Glycerophosphoryl diester phosphodiesterase family CT43_CH5415 PF00905 Penicillin binding protein transpeptidase domain CT43_CH5415 PF00912 Transglycosylase CT43_CH5416 PF08741 YwhD family CT43_CH5417 PF02163 Peptidase family M50 CT43_CH5418 PF01361 Tautomerase enzyme CT43_CH5419 PF01966 HD domain CT43_CH5420 PF01497 Periplasmic binding protein CT43_CH5421 PF00005 ABC transporter CT43_CH5422 PF01032 FecCD transport family CT43_CH5423 PF01032 FecCD transport family CT43_CH5424 PF07293 Protein of unknown function (DUF1450) CT43_CH5426 PF03099 Biotin/lipoate A/B protein ligase family CT43_CH5427 PF01515 Phosphate acetyl/butaryl transferase CT43_CH5429 PF07943 Penicillin-binding protein 5, C-terminal domain CT43_CH5429 PF00768 D-alanyl-D-alanine carboxypeptidase CT43_CH5430 PF07486 Cell Wall Hydrolase CT43_CH5431 PF09671 Spore coat protein (Spore_GerQ) CT43_CH5432 PF04241 Protein of unknown function (DUF423) CT43_CH5434 PF07885 Ion channel CT43_CH5434 PF02254 TrkA-N domain CT43_CH5435 PF00860 Permease family CT43_CH5437 PF12823 Domain of unknown function (DUF3817) CT43_CH5438 PF03167 Uracil DNA glycosylase superfamily CT43_CH5439 PF12679 ABC-2 family transporter protein CT43_CH5440 PF00005 ABC transporter CT43_CH5441 PF13472 GDSL-like Lipase/Acylhydrolase family CT43_CH5442 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CT43_CH5442 PF00356 Bacterial regulatory proteins, lacI family CT43_CH5444 PF03447 Homoserine dehydrogenase, NAD binding domain CT43_CH5444 PF00742 Homoserine dehydrogenase CT43_CH5444 PF01842 ACT domain CT43_CH5445 PF04204 Homoserine O-succinyltransferase CT43_CH5446 PF01053 Cys/Met metabolism PLP-dependent enzyme CT43_CH5448 PF13419 Haloacid dehalogenase-like hydrolase CT43_CH5449 PF00027 Cyclic nucleotide-binding domain CT43_CH5450 PF02525 Flavodoxin-like fold CT43_CH5451 PF00072 Response regulator receiver domain CT43_CH5451 PF00196 Bacterial regulatory proteins, luxR family CT43_CH5452 PF07730 Histidine kinase CT43_CH5452 PF13185 GAF domain CT43_CH5453 PF08543 Phosphomethylpyrimidine kinase CT43_CH5454 PF00990 Diguanylate cyclase, GGDEF domain CT43_CH5454 PF07694 5TMR of 5TMR-LYT CT43_CH5455 PF04328 Selenoprotein, putative CT43_CH5456 PF13722 5TM C-terminal transporter carbon starvation CstA CT43_CH5456 PF02554 Carbon starvation protein CstA CT43_CH5457 PF00072 Response regulator receiver domain CT43_CH5457 PF04397 LytTr DNA-binding domain CT43_CH5460 PF03808 Glycosyl transferase WecB/TagA/CpsF family CT43_CH5461 PF00534 Glycosyl transferases group 1 CT43_CH5461 PF13439 Glycosyltransferase Family 4 CT43_CH5463 PF03458 UPF0126 domain CT43_CH5464 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_CH5466 PF03061 Thioesterase superfamily CT43_CH5467 PF00535 Glycosyl transferase family 2 CT43_CH5469 PF00535 Glycosyl transferase family 2 CT43_CH5471 PF09586 Bacterial membrane protein YfhO CT43_CH5472 PF00535 Glycosyl transferase family 2 CT43_CH5474 PF08361 MAATS-type transcriptional repressor, C-terminal region CT43_CH5474 PF00440 Bacterial regulatory proteins, tetR family CT43_CH5475 PF00005 ABC transporter CT43_CH5475 PF12848 ABC transporter CT43_CH5476 PF00440 Bacterial regulatory proteins, tetR family CT43_CH5477 PF00873 AcrB/AcrD/AcrF family CT43_CH5478 PF01625 Peptide methionine sulfoxide reductase CT43_CH5478 PF01641 SelR domain CT43_CH5479 PF01594 AI-2E family transporter CT43_CH5480 PF04172 LrgB-like family CT43_CH5481 PF03788 LrgA family CT43_CH5482 PF04397 LytTr DNA-binding domain CT43_CH5482 PF00072 Response regulator receiver domain CT43_CH5483 PF13492 GAF domain CT43_CH5483 PF07694 5TMR of 5TMR-LYT CT43_CH5483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH5483 PF06580 Histidine kinase CT43_CH5484 PF07690 Major Facilitator Superfamily CT43_CH5485 PF02028 BCCT, betaine/carnitine/choline family transporter CT43_CH5486 PF02898 Nitric oxide synthase, oxygenase domain CT43_CH5487 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CT43_CH5487 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CT43_CH5489 PF02293 AmiS/UreI family transporter CT43_CH5491 PF16363 GDP-mannose 4,6 dehydratase CT43_CH5492 PF03006 Haemolysin-III related CT43_CH5494 PF03880 DbpA RNA binding domain CT43_CH5494 PF00270 DEAD/DEAH box helicase CT43_CH5494 PF00271 Helicase conserved C-terminal domain CT43_CH5496 PF00478 IMP dehydrogenase / GMP reductase domain CT43_CH5497 PF08439 Oligopeptidase F CT43_CH5497 PF01432 Peptidase family M3 CT43_CH5499 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH5499 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH5499 PF13426 PAS domain CT43_CH5499 PF00989 PAS fold CT43_CH5499 PF13188 PAS domain CT43_CH5500 PF02590 Predicted SPOUT methyltransferase CT43_CH5502 PF13180 PDZ domain CT43_CH5503 PF00753 Metallo-beta-lactamase superfamily CT43_CH5504 PF09648 YycH protein CT43_CH5506 PF13426 PAS domain CT43_CH5506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT43_CH5506 PF00672 HAMP domain CT43_CH5506 PF00512 His Kinase A (phospho-acceptor) domain CT43_CH5507 PF00072 Response regulator receiver domain CT43_CH5507 PF00486 Transcriptional regulatory protein, C terminal CT43_CH5508 PF00709 Adenylosuccinate synthetase CT43_CH5509 PF03796 DnaB-like helicase C terminal domain CT43_CH5509 PF00772 DnaB-like helicase N terminal domain CT43_CH5510 PF03948 Ribosomal protein L9, C-terminal domain CT43_CH5510 PF01281 Ribosomal protein L9, N-terminal domain CT43_CH5511 PF02272 DHHA1 domain CT43_CH5511 PF01368 DHH family CT43_CH5512 PF09991 Predicted membrane protein (DUF2232) CT43_CH5513 PF01084 Ribosomal protein S18 CT43_CH5514 PF00436 Single-strand binding protein family CT43_CH5515 PF01250 Ribosomal protein S6 CT43_CH5516 PF01926 50S ribosome-binding GTPase CT43_CH5516 PF06071 Protein of unknown function (DUF933) CT43_CH5517 PF06107 Bacterial protein of unknown function (DUF951) CT43_CH5518 PF00924 Mechanosensitive ion channel CT43_CH5519 PF06866 Protein of unknown function (DUF1256) CT43_CH5520 PF02195 ParB-like nuclease domain CT43_CH5520 PF17762 HTH domain found in ParB protein CT43_CH5521 PF13614 AAA domain CT43_CH5522 PF02195 ParB-like nuclease domain CT43_CH5522 PF17762 HTH domain found in ParB protein CT43_CH5523 PF02527 rRNA small subunit methyltransferase G CT43_CH5524 PF13932 GidA associated domain CT43_CH5524 PF01134 Glucose inhibited division protein A CT43_CH5525 PF12631 MnmE helical domain CT43_CH5525 PF10396 GTP-binding protein TrmE N-terminus CT43_CH5525 PF01926 50S ribosome-binding GTPase CT43_CH5526 PF14804 Jag N-terminus CT43_CH5526 PF01424 R3H domain CT43_CH5527 PF02096 60Kd inner membrane protein CT43_CH5528 PF00825 Ribonuclease P CT43_CH5529 PF00468 Ribosomal protein L34 CT43_P127001 PF00589 Phage integrase family CT43_P127001 PF02899 Phage integrase, N-terminal SAM-like domain CT43_P127002 PF01526 Tn3 transposase DDE domain CT43_P127002 PF13700 Domain of unknown function (DUF4158) CT43_P127003 PF01609 Transposase DDE domain CT43_P127015 PF00589 Phage integrase family CT43_P127015 PF02899 Phage integrase, N-terminal SAM-like domain CT43_P127016 PF13700 Domain of unknown function (DUF4158) CT43_P127016 PF01526 Tn3 transposase DDE domain CT43_P127017 PF01609 Transposase DDE domain CT43_P127018 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P127019 PF01609 Transposase DDE domain CT43_P127020 PF01609 Transposase DDE domain CT43_P127021 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 CT43_P127021 PF03945 delta endotoxin, N-terminal domain CT43_P127021 PF03944 delta endotoxin CT43_P127021 PF00555 delta endotoxin CT43_P127024 PF00589 Phage integrase family CT43_P127025 PF00589 Phage integrase family CT43_P127025 PF02899 Phage integrase, N-terminal SAM-like domain CT43_P127026 PF00216 Bacterial DNA-binding protein CT43_P127029 PF01385 Probable transposase CT43_P127029 PF12323 Helix-turn-helix domain CT43_P127029 PF07282 Putative transposase DNA-binding domain CT43_P127032 PF01996 F420-0:Gamma-glutamyl ligase CT43_P127032 PF00881 Nitroreductase family CT43_P127034 PF01488 Shikimate / quinate 5-dehydrogenase CT43_P127034 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CT43_P127034 PF08501 Shikimate dehydrogenase substrate binding domain CT43_P127036 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) CT43_P127040 PF00550 Phosphopantetheine attachment site CT43_P127040 PF00501 AMP-binding enzyme CT43_P127040 PF13193 AMP-binding enzyme C-terminal domain CT43_P127040 PF00668 Condensation domain CT43_P127041 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CT43_P127041 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CT43_P127041 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CT43_P127042 PF00589 Phage integrase family CT43_P127042 PF02899 Phage integrase, N-terminal SAM-like domain CT43_P127044 PF00665 Integrase core domain CT43_P127045 PF01695 IstB-like ATP binding protein CT43_P127056 PF00877 NlpC/P60 family CT43_P127058 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P127074 PF17841 BID domain of Bartonella effector protein (Bep) CT43_P127074 PF03389 MobA/MobL family CT43_P127074 PF01443 Viral (Superfamily 1) RNA helicase CT43_P127077 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P127081 PF01751 Toprim domain CT43_P127081 PF01131 DNA topoisomerase CT43_P127094 PF08525 Opacity-associated protein A N-terminal motif CT43_P127094 PF01551 Peptidase family M23 CT43_P127094 PF01476 LysM domain CT43_P127103 PF18801 response regulator aspartate phosphatase H, N terminal CT43_P127103 PF17874 MalT-like TPR region CT43_P14007 PF01446 Replication protein CT43_P281001 PF07029 CryBP1 protein CT43_P281003 PF05105 Bacteriophage holin family CT43_P281012 PF12323 Helix-turn-helix domain CT43_P281012 PF07282 Putative transposase DNA-binding domain CT43_P281012 PF01385 Probable transposase CT43_P281017 PF00797 N-acetyltransferase CT43_P281021 PF01609 Transposase DDE domain CT43_P281022 PF00892 EamA-like transporter family CT43_P281025 PF01022 Bacterial regulatory protein, arsR family CT43_P281028 PF18801 response regulator aspartate phosphatase H, N terminal CT43_P281031 PF07516 SecA Wing and Scaffold domain CT43_P281031 PF01043 SecA preprotein cross-linking domain CT43_P281031 PF02810 SEC-C motif CT43_P281031 PF07517 SecA DEAD-like domain CT43_P281034 PF01695 IstB-like ATP binding protein CT43_P281035 PF00665 Integrase core domain CT43_P281039 PF03515 Colicin-like bacteriocin tRNase domain CT43_P281039 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 CT43_P281043 PF02899 Phage integrase, N-terminal SAM-like domain CT43_P281043 PF00589 Phage integrase family CT43_P281048 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT43_P281049 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CT43_P281049 PF18277 AbrB C-terminal domain CT43_P281053 PF00216 Bacterial DNA-binding protein CT43_P281055 PF01609 Transposase DDE domain CT43_P281057 PF00817 impB/mucB/samB family CT43_P281057 PF11799 impB/mucB/samB family C-terminal domain CT43_P281057 PF11798 IMS family HHH motif CT43_P281058 PF02899 Phage integrase, N-terminal SAM-like domain CT43_P281058 PF00589 Phage integrase family CT43_P281059 PF00589 Phage integrase family CT43_P281062 PF01925 Sulfite exporter TauE/SafE CT43_P281067 PF17443 Uncharacterized protein pXO2-72 CT43_P281071 PF03358 NADPH-dependent FMN reductase CT43_P281072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_P281072 PF03466 LysR substrate binding domain CT43_P281073 PF01526 Tn3 transposase DDE domain CT43_P281073 PF13700 Domain of unknown function (DUF4158) CT43_P281074 PF01609 Transposase DDE domain CT43_P281077 PF18801 response regulator aspartate phosphatase H, N terminal CT43_P281080 PF14436 Bacterial EndoU nuclease CT43_P281080 PF04740 LXG domain of WXG superfamily CT43_P281082 PF04235 Protein of unknown function (DUF418) CT43_P281088 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) CT43_P281092 PF01348 Type II intron maturase CT43_P281092 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P281094 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P281096 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P281100 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P281112 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P281112 PF01348 Type II intron maturase CT43_P281143 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P281143 PF01348 Type II intron maturase CT43_P281144 PF01695 IstB-like ATP binding protein CT43_P281145 PF00665 Integrase core domain CT43_P281146 PF01348 Type II intron maturase CT43_P281146 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P281148 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P281149 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CT43_P281149 PF09397 Ftsk gamma domain CT43_P281149 PF01580 FtsK/SpoIIIE family CT43_P281149 PF17854 FtsK alpha domain CT43_P281155 PF04098 Rad52/22 family double-strand break repair protein CT43_P281156 PF02767 DNA polymerase III beta subunit, central domain CT43_P281156 PF00712 DNA polymerase III beta subunit, N-terminal domain CT43_P281156 PF02768 DNA polymerase III beta subunit, C-terminal domain CT43_P281183 PF09704 CRISPR-associated protein (Cas_Cas5) CT43_P281196 PF01348 Type II intron maturase CT43_P281196 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P281205 PF08378 Nuclease-related domain CT43_P281209 PF01131 DNA topoisomerase CT43_P281209 PF13342 C-terminal repeat of topoisomerase CT43_P281209 PF01751 Toprim domain CT43_P281210 PF00565 Staphylococcal nuclease homologue CT43_P281213 PF02600 Disulfide bond formation protein DsbB CT43_P281214 PF01022 Bacterial regulatory protein, arsR family CT43_P281215 PF18801 response regulator aspartate phosphatase H, N terminal CT43_P281220 PF00589 Phage integrase family CT43_P281223 PF00797 N-acetyltransferase CT43_P281224 PF13333 Integrase core domain CT43_P281224 PF00665 Integrase core domain CT43_P281224 PF13276 HTH-like domain CT43_P281226 PF01131 DNA topoisomerase CT43_P281226 PF01751 Toprim domain CT43_P281226 PF13342 C-terminal repeat of topoisomerase CT43_P281230 PF01385 Probable transposase CT43_P281230 PF12323 Helix-turn-helix domain CT43_P281230 PF07282 Putative transposase DNA-binding domain CT43_P281233 PF04303 PrpF protein CT43_P281236 PF12323 Helix-turn-helix domain CT43_P281236 PF01385 Probable transposase CT43_P281236 PF07282 Putative transposase DNA-binding domain CT43_P281239 PF05791 Bacillus haemolytic enterotoxin (HBL) CT43_P281240 PF01695 IstB-like ATP binding protein CT43_P281245 PF01022 Bacterial regulatory protein, arsR family CT43_P281247 PF17418 Sporulation delaying protein SdpA CT43_P281251 PF01979 Amidohydrolase family CT43_P281252 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT43_P281252 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT43_P281253 PF03466 LysR substrate binding domain CT43_P281253 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT43_P281265 PF09131 Bacillus thuringiensis delta-Endotoxin, middle domain CT43_P281265 PF03945 delta endotoxin, N-terminal domain CT43_P281265 PF03944 delta endotoxin CT43_P281266 PF02743 Cache domain CT43_P281266 PF00672 HAMP domain CT43_P281266 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CT43_P281267 PF02080 TrkA-C domain CT43_P281268 PF00999 Sodium/hydrogen exchanger family CT43_P281269 PF01510 N-acetylmuramoyl-L-alanine amidase CT43_P281269 PF01476 LysM domain CT43_P281269 PF01471 Putative peptidoglycan binding domain CT43_P281270 PF03945 delta endotoxin, N-terminal domain CT43_P281270 PF17997 Insecticidal delta-endotoxin CryIA(c) domain 5 CT43_P281270 PF03944 delta endotoxin CT43_P281270 PF00555 delta endotoxin CT43_P281271 PF03944 delta endotoxin CT43_P281271 PF00555 delta endotoxin CT43_P281271 PF03945 delta endotoxin, N-terminal domain CT43_P281272 PF13495 Phage integrase, N-terminal SAM-like domain CT43_P281272 PF00589 Phage integrase family CT43_P281278 PF03945 delta endotoxin, N-terminal domain CT43_P281278 PF09131 Bacillus thuringiensis delta-Endotoxin, middle domain CT43_P281278 PF03944 delta endotoxin CT43_P51001 PF14550 Putative phage serine protease XkdF CT43_P51002 PF05065 Phage capsid family CT43_P51024 PF02371 Transposase IS116/IS110/IS902 family CT43_P51024 PF01548 Transposase CT43_P51026 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CT43_P51026 PF13457 GW (Gly-Tryp) dipeptide domain CT43_P51029 PF18801 response regulator aspartate phosphatase H, N terminal CT43_P51067 PF03838 Recombination protein U CT43_P51071 PF01609 Transposase DDE domain CT43_P6001 PF12802 MarR family CT43_P6003 PF01076 Plasmid recombination enzyme CT43_P6006 PF18801 response regulator aspartate phosphatase H, N terminal CT43_P72004 PF00589 Phage integrase family CT43_P72005 PF02899 Phage integrase, N-terminal SAM-like domain CT43_P72005 PF00589 Phage integrase family CT43_P72011 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P72018 PF00877 NlpC/P60 family CT43_P72027 PF00437 Type II/IV secretion system protein CT43_P72048 PF02661 Fic/DOC family CT43_P72048 PF17841 BID domain of Bartonella effector protein (Bep) CT43_P72053 PF02899 Phage integrase, N-terminal SAM-like domain CT43_P72053 PF00589 Phage integrase family CT43_P72054 PF13342 C-terminal repeat of topoisomerase CT43_P72054 PF01751 Toprim domain CT43_P72054 PF01131 DNA topoisomerase CT43_P72057 PF18801 response regulator aspartate phosphatase H, N terminal CT43_P72059 PF17209 Hfq protein CT43_P72068 PF01609 Transposase DDE domain CT43_P72070 PF01695 IstB-like ATP binding protein CT43_P72071 PF00665 Integrase core domain CT43_P72074 PF01022 Bacterial regulatory protein, arsR family CT43_P72078 PF00196 Bacterial regulatory proteins, luxR family CT43_P72078 PF00072 Response regulator receiver domain CT43_P825204 PF01076 Plasmid recombination enzyme CT43_P825208 PF01446 Replication protein CT43_P83026 PF01548 Transposase CT43_P83026 PF02371 Transposase IS116/IS110/IS902 family CT43_P83040 PF00817 impB/mucB/samB family CT43_P83040 PF11798 IMS family HHH motif CT43_P83040 PF11799 impB/mucB/samB family C-terminal domain CT43_P83041 PF14040 Deoxyribonuclease NucA/NucB CT43_P83046 PF00589 Phage integrase family CT43_P83047 PF00665 Integrase core domain CT43_P83048 PF01695 IstB-like ATP binding protein CT43_P83049 PF03793 PASTA domain CT43_P83049 PF00069 Protein kinase domain CT43_P83051 PF01022 Bacterial regulatory protein, arsR family CT43_P83052 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CT43_P83052 PF18277 AbrB C-terminal domain CT43_P83053 PF17209 Hfq protein CT43_P83055 PF12389 Camelysin metallo-endopeptidase CT43_P83058 PF00239 Resolvase, N terminal domain CT43_P83058 PF02796 Helix-turn-helix domain of resolvase CT43_P83062 PF00082 Subtilase family CT43_P83067 PF01051 Initiator Replication protein CT43_P83085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT43_P851301 PF01076 Plasmid recombination enzyme CT43_P851302 PF01446 Replication protein CT43_P851308 PF18801 response regulator aspartate phosphatase H, N terminal CT43_P954701 PF02899 Phage integrase, N-terminal SAM-like domain CT43_P954701 PF00589 Phage integrase family CT43_P954702 PF01526 Tn3 transposase DDE domain CT43_P954702 PF13700 Domain of unknown function (DUF4158) CT43_P954704 PF12802 MarR family CT43_P954705 PF01076 Plasmid recombination enzyme