locus-tag	class	description
CT43_CH0002	COG0592	DNA-directed DNA polymerase activity
CT43_CH0003	COG2501	S4 domain
CT43_CH0005	COG0187	DNA topoisomerase II activity
CT43_CH0006	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CT43_CH0008	COG0516	GMP reductase activity
CT43_CH0008	COG0517	IMP dehydrogenase activity
CT43_CH0009	COG1686	Belongs to the peptidase S11 family
CT43_CH0014	COG1428	Deoxynucleoside kinase
CT43_CH0015	COG1428	Deoxynucleoside kinase
CT43_CH0016	COG1335	isochorismatase
CT43_CH0017	COG0590	tRNA wobble adenosine to inosine editing
CT43_CH0018	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CT43_CH0024	COG1982	Orn Lys Arg decarboxylase major
CT43_CH0026	COG0470	DNA polymerase III
CT43_CH0027	COG1774	PSP1 C-terminal conserved region
CT43_CH0029	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CT43_CH0031	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CT43_CH0032	COG2002	toxin-antitoxin pair type II binding
CT43_CH0034	COG0084	hydrolase, TatD family'
CT43_CH0038	COG4466	Protein conserved in bacteria
CT43_CH0041	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CT43_CH0042	COG0251	oxidation-reduction process
CT43_CH0045	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CT43_CH0048	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CT43_CH0049	COG2002	toxin-antitoxin pair type II binding
CT43_CH0050	COG2244	polysaccharide biosynthetic process
CT43_CH0051	COG3956	TIGRFAM MazG family protein
CT43_CH0052	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CT43_CH0056	COG1098	S1 RNA binding domain
CT43_CH0057	COG2208	phosphoserine phosphatase activity
CT43_CH0060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CT43_CH0063	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CT43_CH0064	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CT43_CH0065	COG0512	Glutamine amidotransferase of anthranilate synthase
CT43_CH0066	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CT43_CH0067	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CT43_CH0068	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CT43_CH0069	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CT43_CH0070	COG1396	sequence-specific DNA binding
CT43_CH0071	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CT43_CH0073	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH0074	COG0506	proline dehydrogenase activity
CT43_CH0076	COG3880	PFAM UvrB UvrC protein
CT43_CH0078	COG0542	response to heat
CT43_CH0079	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CT43_CH0081	COG4956	integral membrane protein (PIN domain superfamily)
CT43_CH0085	COG1045	serine acetyltransferase
CT43_CH0088	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CT43_CH0089	COG3688	RNA-binding protein containing a PIN domain
CT43_CH0091	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CT43_CH0092	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CT43_CH0093	COG0250	Participates in transcription elongation, termination and antitermination
CT43_CH0098	COG2813	Specifically methylates the guanine in position
CT43_CH0101	COG1358	cellular component organization or biogenesis
CT43_CH0123	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CT43_CH0128	COG0201	protein transport
CT43_CH0130	COG0024	Methionine aminopeptidase
CT43_CH0132	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CT43_CH0139	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CT43_CH0144	COG0860	N-Acetylmuramoyl-L-alanine amidase
CT43_CH0145	COG0489	protein tyrosine kinase activity
CT43_CH0147	COG2194	sulfuric ester hydrolase activity
CT43_CH0148	COG0726	polysaccharide deacetylase
CT43_CH0152	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CT43_CH0153	COG4856	YbbR-like protein
CT43_CH0161	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH0162	COG2011	ABC-type metal ion transport system permease component
CT43_CH0163	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CT43_CH0164	COG1464	Belongs to the NlpA lipoprotein family
CT43_CH0165	COG0604	alcohol dehydrogenase
CT43_CH0167	COG0277	FAD linked oxidase domain protein
CT43_CH0168	COG2271	Major facilitator Superfamily
CT43_CH0170	COG2814	Major facilitator Superfamily
CT43_CH0174	COG0601	transmembrane transport
CT43_CH0175	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CT43_CH0176	COG0444	Belongs to the ABC transporter superfamily
CT43_CH0177	COG4608	Belongs to the ABC transporter superfamily
CT43_CH0178	COG4166	transmembrane transport
CT43_CH0181	COG4166	transmembrane transport
CT43_CH0182	COG4166	transmembrane transport
CT43_CH0183	COG0656	L-ascorbic acid biosynthetic process
CT43_CH0188	COG4149	molybdate abc transporter
CT43_CH0189	COG0725	ABC transporter, periplasmic molybdate-binding protein
CT43_CH0190	COG1910	domain protein
CT43_CH0192	COG0697	spore germination
CT43_CH0194	COG0204	Acyl-transferase
CT43_CH0195	COG1609	Transcriptional regulator
CT43_CH0196	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH0200	COG5298	Protein conserved in bacteria
CT43_CH0204	COG0488	(ABC) transporter
CT43_CH0205	COG0747	negative chemotaxis
CT43_CH0206	COG0601	transmembrane transport
CT43_CH0208	COG0444	Belongs to the ABC transporter superfamily
CT43_CH0209	COG4608	Belongs to the ABC transporter superfamily
CT43_CH0210	COG0561	phosphatase activity
CT43_CH0213	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CT43_CH0214	COG0179	Fumarylacetoacetate (FAA) hydrolase
CT43_CH0216	COG0531	amino acid
CT43_CH0218	COG2814	Major facilitator Superfamily
CT43_CH0220	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CT43_CH0222	COG4294	response to UV
CT43_CH0223	COG0705	Rhomboid family
CT43_CH0225	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CT43_CH0226	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CT43_CH0227	COG0864	Transcriptional regulator
CT43_CH0228	COG2337	Toxic component of a toxin-antitoxin (TA) module
CT43_CH0229	COG2183	response to ionizing radiation
CT43_CH0230	COG2183	response to ionizing radiation
CT43_CH0232	COG0802	atpase or kinase
CT43_CH0233	COG1214	PFAM Peptidase M22, glycoprotease
CT43_CH0234	COG0456	acetyltransferase
CT43_CH0236	COG0488	(ABC) transporter
CT43_CH0239	COG1266	CAAX protease self-immunity
CT43_CH0243	COG5444	nuclease activity
CT43_CH0246	COG2252	PERMEase
CT43_CH0248	COG5002	protein histidine kinase activity
CT43_CH0250	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CT43_CH0258	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CT43_CH0260	COG1215	transferase activity, transferring glycosyl groups
CT43_CH0261	COG0697	spore germination
CT43_CH0264	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CT43_CH0265	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CT43_CH0266	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CT43_CH0268	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CT43_CH0271	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CT43_CH0273	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CT43_CH0275	COG0151	Belongs to the GarS family
CT43_CH0277	COG0583	DNA-binding transcription factor activity
CT43_CH0282	COG0210	DNA helicase
CT43_CH0284	COG4851	CamS sex pheromone cAM373 precursor
CT43_CH0287	COG1335	isochorismatase
CT43_CH0289	COG2011	ABC-type metal ion transport system permease component
CT43_CH0290	COG1464	Belongs to the NlpA lipoprotein family
CT43_CH0292	COG0003	Pfam Anion-transporting ATPase
CT43_CH0293	COG1846	Transcriptional regulator
CT43_CH0294	COG4682	membrane
CT43_CH0298	COG1597	lipid kinase activity
CT43_CH0300	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CT43_CH0302	COG1012	belongs to the aldehyde dehydrogenase family
CT43_CH0303	COG2076	Multidrug Resistance protein
CT43_CH0305	COG2309	aminopeptidase activity
CT43_CH0309	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CT43_CH0311	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CT43_CH0312	COG4807	Protein conserved in bacteria
CT43_CH0318	COG1473	amidohydrolase
CT43_CH0322	COG0450	alkyl hydroperoxide reductase
CT43_CH0323	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
CT43_CH0325	COG0235	Class ii aldolase
CT43_CH0326	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH0327	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH0328	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CT43_CH0331	COG0166	Belongs to the GPI family
CT43_CH0336	COG5002	protein histidine kinase activity
CT43_CH0340	COG3541	Predicted nucleotidyltransferase
CT43_CH0342	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CT43_CH0342	COG0723	plastoquinol--plastocyanin reductase activity
CT43_CH0344	COG0765	amino acid transport
CT43_CH0346	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CT43_CH0348	COG0840	transmembrane signaling receptor activity
CT43_CH0353	COG0549	Belongs to the carbamate kinase family
CT43_CH0354	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CT43_CH0356	COG0277	FAD linked oxidase domain protein
CT43_CH0357	COG0366	Alpha amylase catalytic
CT43_CH0358	COG1263	PTS System
CT43_CH0358	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CT43_CH0358	COG2190	(PTS) system
CT43_CH0364	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CT43_CH0368	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CT43_CH0369	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CT43_CH0370	COG1116	anion transmembrane transporter activity
CT43_CH0371	COG0488	(ABC) transporter
CT43_CH0380	COG2270	Major facilitator Superfamily
CT43_CH0386	COG2310	stress, protein
CT43_CH0387	COG2310	stress, protein
CT43_CH0388	COG2310	stress, protein
CT43_CH0389	COG0861	Integral membrane protein TerC family
CT43_CH0391	COG3853	Toxic anion resistance protein (TelA)
CT43_CH0394	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CT43_CH0396	COG1295	ribonuclease BN
CT43_CH0397	COG2217	Heavy metal translocating P-type atpase
CT43_CH0398	COG0697	spore germination
CT43_CH0402	COG0586	Pfam SNARE associated Golgi protein
CT43_CH0405	COG3871	stress protein (general stress protein 26)
CT43_CH0406	COG0387	Pfam Sodium calcium exchanger
CT43_CH0408	COG0535	radical SAM domain protein
CT43_CH0412	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CT43_CH0413	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CT43_CH0416	COG3829	transcription factor binding
CT43_CH0418	COG0833	amino acid
CT43_CH0419	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CT43_CH0424	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CT43_CH0424	COG1263	PTS System
CT43_CH0425	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CT43_CH0428	COG1216	Glycosyl transferase, family 2
CT43_CH0430	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CT43_CH0430	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CT43_CH0431	COG0463	Glycosyl transferase, family 2
CT43_CH0433	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CT43_CH0437	COG1228	amidohydrolase
CT43_CH0438	COG1090	epimerase
CT43_CH0443	COG1988	membrane-bound metal-dependent
CT43_CH0444	COG1194	a g-specific adenine glycosylase
CT43_CH0450	COG1132	(ABC) transporter
CT43_CH0451	COG4129	membrane
CT43_CH0452	COG0067	glutamate synthase
CT43_CH0452	COG0070	glutamate synthase
CT43_CH0452	COG0069	glutamate synthase activity
CT43_CH0454	COG4555	ABC transporter
CT43_CH0458	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CT43_CH0459	COG0735	belongs to the Fur family
CT43_CH0465	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CT43_CH0469	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CT43_CH0471	COG2766	serine protein kinase
CT43_CH0475	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CT43_CH0477	COG1585	Membrane protein implicated in regulation of membrane protease activity
CT43_CH0478	COG2268	Band 7 protein
CT43_CH0480	COG3290	protein histidine kinase activity
CT43_CH0481	COG4565	transcriptional regulatory protein
CT43_CH0482	COG2851	Citrate transporter
CT43_CH0487	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CT43_CH0488	COG3842	ATPase activity
CT43_CH0489	COG1175	transmembrane transport
CT43_CH0490	COG0395	ABC-type sugar transport system, permease component
CT43_CH0492	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CT43_CH0493	COG0745	RESPONSE REGULATOR receiver
CT43_CH0494	COG5002	protein histidine kinase activity
CT43_CH0496	COG4990	cell redox homeostasis
CT43_CH0498	COG3290	protein histidine kinase activity
CT43_CH0499	COG4565	transcriptional regulatory protein
CT43_CH0500	COG3493	citrate carrier protein
CT43_CH0501	COG0281	malic enzyme
CT43_CH0503	COG0697	spore germination
CT43_CH0504	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH0506	COG5002	protein histidine kinase activity
CT43_CH0507	COG0745	RESPONSE REGULATOR receiver
CT43_CH0510	COG0456	acetyltransferase
CT43_CH0510	COG0454	-acetyltransferase
CT43_CH0511	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CT43_CH0512	COG3383	formate dehydrogenase (NAD+) activity
CT43_CH0513	COG2427	Protein of unknown function (DUF1641)
CT43_CH0516	COG0531	amino acid
CT43_CH0517	COG0640	Transcriptional regulator
CT43_CH0518	COG2217	Heavy metal translocating P-type atpase
CT43_CH0519	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CT43_CH0522	COG3227	Zinc metalloprotease (Elastase)
CT43_CH0526	COG2720	vancomycin resistance protein
CT43_CH0527	COG1316	TRANSCRIPTIONal
CT43_CH0528	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CT43_CH0529	COG0346	lactoylglutathione lyase activity
CT43_CH0530	COG1253	flavin adenine dinucleotide binding
CT43_CH0531	COG1027	Aspartate ammonia-lyase
CT43_CH0532	COG1620	l-lactate permease
CT43_CH0535	COG3104	oligopeptide transport
CT43_CH0536	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CT43_CH0537	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH0538	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH0541	COG0156	8-amino-7-oxononanoate synthase activity
CT43_CH0542	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CT43_CH0544	COG4548	von Willebrand factor, type A
CT43_CH0545	COG0714	Associated with various cellular activities
CT43_CH0549	COG0531	amino acid
CT43_CH0550	COG2188	Transcriptional regulator
CT43_CH0551	COG1263	PTS System
CT43_CH0551	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CT43_CH0552	COG0366	Alpha amylase catalytic
CT43_CH0555	COG0697	spore germination
CT43_CH0557	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CT43_CH0558	COG1115	amino acid carrier protein
CT43_CH0559	COG1126	abc transporter atp-binding protein
CT43_CH0560	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CT43_CH0561	COG0765	amino acid transport
CT43_CH0562	COG0765	amino acid transport
CT43_CH0563	COG3344	reverse transcriptase
CT43_CH0564	COG0833	amino acid
CT43_CH0567	COG1595	DNA-templated transcription, initiation
CT43_CH0569	COG2378	regulation of single-species biofilm formation
CT43_CH0570	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CT43_CH0571	COG5002	protein histidine kinase activity
CT43_CH0577	COG0659	secondary active sulfate transmembrane transporter activity
CT43_CH0580	COG0747	negative chemotaxis
CT43_CH0582	COG0601	transmembrane transport
CT43_CH0583	COG4608	Belongs to the ABC transporter superfamily
CT43_CH0585	COG2271	Major facilitator Superfamily
CT43_CH0586	COG1846	Transcriptional regulator
CT43_CH0587	COG0477	Major facilitator Superfamily
CT43_CH0588	COG1609	Transcriptional regulator
CT43_CH0589	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CT43_CH0592	COG1172	Belongs to the binding-protein-dependent transport system permease family
CT43_CH0593	COG1879	ABC-type sugar transport system periplasmic component
CT43_CH0594	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CT43_CH0598	COG1063	alcohol dehydrogenase
CT43_CH0603	COG1396	sequence-specific DNA binding
CT43_CH0610	COG5377	YqaJ viral recombinase family
CT43_CH0611	COG3723	Recombinational DNA repair protein, rece pathway
CT43_CH0613	COG1484	DNA-dependent DNA replication
CT43_CH0623	COG3617	BRO family, N-terminal domain
CT43_CH0628	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CT43_CH0646	COG1388	LysM domain
CT43_CH0646	COG3409	Peptidoglycan-binding domain 1 protein
CT43_CH0646	COG5632	N-Acetylmuramoyl-L-alanine amidase
CT43_CH0650	COG1674	ftsk spoiiie
CT43_CH0659	COG0840	transmembrane signaling receptor activity
CT43_CH0660	COG3584	3D domain protein
CT43_CH0660	COG1388	LysM domain
CT43_CH0661	COG1476	TRANSCRIPTIONal
CT43_CH0667	COG1114	Component of the transport system for branched-chain amino acids
CT43_CH0670	COG1113	amino acid transport
CT43_CH0671	COG2252	PERMEase
CT43_CH0674	COG2153	protein acetylation
CT43_CH0676	COG0475	glutathione-regulated potassium exporter activity
CT43_CH0676	COG0569	domain protein
CT43_CH0678	COG1845	cytochrome c oxidase, subunit III
CT43_CH0679	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CT43_CH0681	COG0833	amino acid
CT43_CH0683	COG4990	cell redox homeostasis
CT43_CH0686	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CT43_CH0687	COG0697	spore germination
CT43_CH0688	COG0531	amino acid
CT43_CH0691	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CT43_CH0692	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CT43_CH0693	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CT43_CH0693	COG1918	ferrous iron import across plasma membrane
CT43_CH0694	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CT43_CH0695	COG0573	inorganic phosphate transmembrane transporter activity
CT43_CH0696	COG0581	inorganic phosphate transmembrane transporter activity
CT43_CH0698	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CT43_CH0699	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CT43_CH0703	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CT43_CH0704	COG1116	anion transmembrane transporter activity
CT43_CH0705	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CT43_CH0706	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CT43_CH0707	COG0352	thiamine-phosphate diphosphorylase activity
CT43_CH0708	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CT43_CH0709	COG2104	thiamine diphosphate biosynthetic process
CT43_CH0711	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CT43_CH0712	COG0351	phosphomethylpyrimidine kinase
CT43_CH0718	COG2205	protein histidine kinase activity
CT43_CH0719	COG2814	Major facilitator Superfamily
CT43_CH0720	COG1846	Transcriptional regulator
CT43_CH0723	COG2252	PERMEase
CT43_CH0724	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH0727	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CT43_CH0728	COG1621	beta-fructofuranosidase activity
CT43_CH0729	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CT43_CH0729	COG1263	PTS System
CT43_CH0730	COG1609	Transcriptional regulator
CT43_CH0740	COG0778	Nitroreductase
CT43_CH0741	COG2719	SpoVR family
CT43_CH0743	COG1414	Transcriptional regulator
CT43_CH0746	COG0446	pyridine nucleotide-disulphide oxidoreductase
CT43_CH0747	COG1937	Protein conserved in bacteria
CT43_CH0748	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CT43_CH0748	COG0425	Belongs to the sulfur carrier protein TusA family
CT43_CH0749	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CT43_CH0749	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH0750	COG0425	Belongs to the sulfur carrier protein TusA family
CT43_CH0751	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CT43_CH0753	COG2210	Belongs to the sulfur carrier protein TusA family
CT43_CH0754	COG0730	response to heat
CT43_CH0756	COG1316	TRANSCRIPTIONal
CT43_CH0757	COG0604	alcohol dehydrogenase
CT43_CH0758	COG1283	sodium-dependent phosphate transmembrane transporter activity
CT43_CH0761	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CT43_CH0761	COG3711	transcriptional antiterminator
CT43_CH0762	COG1447	Phosphotransferase system cellobiose-specific component IIA
CT43_CH0763	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CT43_CH0767	COG3584	3D domain protein
CT43_CH0767	COG1388	LysM domain
CT43_CH0768	COG0577	efflux transmembrane transporter activity
CT43_CH0769	COG1136	(ABC) transporter
CT43_CH0771	COG5522	Integral membrane protein (intg_mem_TP0381)
CT43_CH0774	COG1114	Component of the transport system for branched-chain amino acids
CT43_CH0775	COG3546	catalase activity
CT43_CH0782	COG0586	Pfam SNARE associated Golgi protein
CT43_CH0789	COG0531	amino acid
CT43_CH0790	COG0475	glutathione-regulated potassium exporter activity
CT43_CH0792	COG1737	Transcriptional regulator
CT43_CH0794	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CT43_CH0794	COG1263	PTS System
CT43_CH0796	COG2259	Doxx family
CT43_CH0800	COG1522	sequence-specific DNA binding
CT43_CH0801	COG0165	Argininosuccinate lyase
CT43_CH0801	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CT43_CH0802	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH0804	COG2076	Multidrug Resistance protein
CT43_CH0806	COG1309	transcriptional regulator
CT43_CH0807	COG2814	Major facilitator Superfamily
CT43_CH0808	COG1733	regulation of RNA biosynthetic process
CT43_CH0812	COG4533	DNA binding
CT43_CH0813	COG2211	Major facilitator Superfamily
CT43_CH0815	COG0693	protein deglycase activity
CT43_CH0816	COG0753	catalase activity
CT43_CH0816	COG0693	protein deglycase activity
CT43_CH0818	COG0531	amino acid
CT43_CH0821	COG1012	belongs to the aldehyde dehydrogenase family
CT43_CH0822	COG1132	(ABC) transporter
CT43_CH0823	COG1132	(ABC) transporter
CT43_CH0824	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CT43_CH0825	COG0765	amino acid transport
CT43_CH0826	COG1126	abc transporter atp-binding protein
CT43_CH0829	COG0189	ligase activity
CT43_CH0836	COG0028	Belongs to the TPP enzyme family
CT43_CH0837	COG3527	Alpha-acetolactate decarboxylase
CT43_CH0840	COG0561	phosphatase activity
CT43_CH0842	COG3409	Peptidoglycan-binding domain 1 protein
CT43_CH0842	COG5632	N-Acetylmuramoyl-L-alanine amidase
CT43_CH0844	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CT43_CH0845	COG0318	PFAM AMP-dependent synthetase and ligase
CT43_CH0848	COG0659	secondary active sulfate transmembrane transporter activity
CT43_CH0849	COG2244	polysaccharide biosynthetic process
CT43_CH0853	COG1024	Enoyl-CoA hydratase
CT43_CH0857	COG1363	Peptidase, m42
CT43_CH0865	COG0601	transmembrane transport
CT43_CH0866	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CT43_CH0867	COG0444	Belongs to the ABC transporter superfamily
CT43_CH0868	COG4608	Belongs to the ABC transporter superfamily
CT43_CH0874	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH0878	COG0477	Major facilitator Superfamily
CT43_CH0879	COG3290	protein histidine kinase activity
CT43_CH0880	COG4565	transcriptional regulatory protein
CT43_CH0881	COG3181	Tripartite tricarboxylate transporter family receptor
CT43_CH0882	COG0494	nUDIX hydrolase
CT43_CH0885	COG0305	Participates in initiation and elongation during chromosome replication
CT43_CH0891	COG0477	Major facilitator Superfamily
CT43_CH0897	COG1073	alpha beta
CT43_CH0905	COG1183	phosphatidylcholine synthase activity
CT43_CH0908	COG2814	Major facilitator Superfamily
CT43_CH0909	COG0640	Transcriptional regulator
CT43_CH0911	COG2376	Dihydroxyacetone kinase
CT43_CH0913	COG2376	Dihydroxyacetone kinase
CT43_CH0922	COG0457	Tetratricopeptide repeat
CT43_CH0923	COG2373	Large extracellular alpha-helical protein
CT43_CH0930	COG0596	Alpha beta hydrolase
CT43_CH0934	COG3237	CsbD-like
CT43_CH0939	COG1191	sigma factor activity
CT43_CH0941	COG2208	phosphoserine phosphatase activity
CT43_CH0942	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CT43_CH0949	COG2801	Transposase and inactivated derivatives
CT43_CH0952	COG3344	reverse transcriptase
CT43_CH0954	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CT43_CH0958	COG0420	3'-5' exonuclease activity
CT43_CH0959	COG4717	serine-type aminopeptidase activity
CT43_CH0962	COG1280	lysine exporter protein (LysE YggA)
CT43_CH0964	COG0346	lactoylglutathione lyase activity
CT43_CH0965	COG0346	lactoylglutathione lyase activity
CT43_CH0966	COG0457	Tetratricopeptide repeat
CT43_CH0968	COG2267	carboxylic ester hydrolase activity
CT43_CH0973	COG2140	Oxalate decarboxylase
CT43_CH0974	COG3620	sequence-specific DNA binding
CT43_CH0975	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CT43_CH0976	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CT43_CH0978	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CT43_CH0979	COG1695	Transcriptional regulator
CT43_CH0982	COG1595	DNA-templated transcription, initiation
CT43_CH0985	COG3973	AAA domain
CT43_CH0990	COG4980	gas vesicle protein
CT43_CH0991	COG0537	adenosine 5'-monophosphoramidase activity
CT43_CH0992	COG1131	(ABC) transporter
CT43_CH0993	COG4473	ABC transporter
CT43_CH1004	COG1309	transcriptional regulator
CT43_CH1006	COG3402	PFAM membrane-flanked domain
CT43_CH1007	COG3428	Bacterial PH domain
CT43_CH1016	COG0697	spore germination
CT43_CH1017	COG3402	PFAM membrane-flanked domain
CT43_CH1018	COG3428	Bacterial PH domain
CT43_CH1019	COG2329	Antibiotic biosynthesis monooxygenase
CT43_CH1020	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CT43_CH1030	COG1309	transcriptional regulator
CT43_CH1031	COG1511	domain protein
CT43_CH1034	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH1035	COG1609	Transcriptional regulator
CT43_CH1037	COG1234	tRNA 3'-trailer cleavage
CT43_CH1038	COG0095	Lipoate-protein ligase
CT43_CH1040	COG0318	PFAM AMP-dependent synthetase and ligase
CT43_CH1042	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CT43_CH1044	COG4208	sulfate ABC transporter
CT43_CH1047	COG1408	metallophosphoesterase
CT43_CH1048	COG1078	dGTPase activity
CT43_CH1050	COG1595	DNA-templated transcription, initiation
CT43_CH1051	COG2207	Transcriptional regulator
CT43_CH1051	COG3708	Transcriptional regulator
CT43_CH1052	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_CH1053	COG2205	protein histidine kinase activity
CT43_CH1054	COG0745	RESPONSE REGULATOR receiver
CT43_CH1059	COG0501	Belongs to the peptidase M48B family
CT43_CH1060	COG0840	transmembrane signaling receptor activity
CT43_CH1061	COG3693	PFAM glycoside hydrolase, family 10
CT43_CH1063	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CT43_CH1064	COG2224	Isocitrate lyase
CT43_CH1067	COG1278	Cold shock
CT43_CH1072	COG0398	Pfam SNARE associated Golgi protein
CT43_CH1076	COG0202	RNA polymerase activity
CT43_CH1084	COG0179	Fumarylacetoacetate (FAA) hydrolase
CT43_CH1089	COG0367	asparagine synthase
CT43_CH1091	COG0753	catalase activity
CT43_CH1092	COG0004	ammonium transporteR
CT43_CH1096	COG2996	Protein conserved in bacteria
CT43_CH1099	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH1102	COG0561	phosphatase activity
CT43_CH1106	COG2267	carboxylic ester hydrolase activity
CT43_CH1110	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CT43_CH1111	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CT43_CH1112	COG5504	Zn-dependent protease
CT43_CH1114	COG0180	Tryptophanyl-tRNA synthetase
CT43_CH1116	COG4166	transmembrane transport
CT43_CH1117	COG0601	transmembrane transport
CT43_CH1118	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CT43_CH1119	COG0444	Belongs to the ABC transporter superfamily
CT43_CH1120	COG4608	Belongs to the ABC transporter superfamily
CT43_CH1121	COG0534	Mate efflux family protein
CT43_CH1122	COG4166	transmembrane transport
CT43_CH1124	COG1393	Belongs to the ArsC family
CT43_CH1125	COG0861	Integral membrane protein TerC family
CT43_CH1127	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CT43_CH1129	COG1164	Oligoendopeptidase f
CT43_CH1131	COG2346	COG2346, Truncated hemoglobins
CT43_CH1132	COG4116	CYTH
CT43_CH1134	COG2357	RelA SpoT domain protein
CT43_CH1136	COG0564	pseudouridine synthase activity
CT43_CH1140	COG0772	Belongs to the SEDS family
CT43_CH1141	COG1216	Glycosyl transferase, family 2
CT43_CH1150	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CT43_CH1153	COG1091	dTDP-4-dehydrorhamnose reductase activity
CT43_CH1162	COG2153	protein acetylation
CT43_CH1164	COG2382	esterase
CT43_CH1168	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CT43_CH1171	COG0512	Glutamine amidotransferase of anthranilate synthase
CT43_CH1171	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CT43_CH1178	COG1620	l-lactate permease
CT43_CH1179	COG5634	Uncharacterized conserved protein (DUF2278)
CT43_CH1182	COG4640	response to antibiotic
CT43_CH1187	COG2226	methyltransferase
CT43_CH1191	COG0508	dehydrogenase complex catalyzes the overall conversion of
CT43_CH1193	COG1476	TRANSCRIPTIONal
CT43_CH1207	COG1686	Belongs to the peptidase S11 family
CT43_CH1208	COG0681	Belongs to the peptidase S26 family
CT43_CH1215	COG1012	belongs to the aldehyde dehydrogenase family
CT43_CH1217	COG1176	ABC-type spermidine putrescine transport system, permease component I
CT43_CH1218	COG1177	transmembrane transport
CT43_CH1219	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CT43_CH1221	COG2409	Drug exporters of the RND superfamily
CT43_CH1223	COG0564	pseudouridine synthase activity
CT43_CH1225	COG2340	Cysteine-rich secretory protein family
CT43_CH1226	COG0247	lactate metabolic process
CT43_CH1227	COG0277	FAD linked oxidase domain protein
CT43_CH1228	COG3835	regulator
CT43_CH1230	COG0745	RESPONSE REGULATOR receiver
CT43_CH1232	COG5002	protein histidine kinase activity
CT43_CH1233	COG2186	Transcriptional regulator
CT43_CH1237	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CT43_CH1239	COG2116	formate transmembrane transporter activity
CT43_CH1240	COG0861	Integral membrane protein TerC family
CT43_CH1241	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CT43_CH1243	COG2030	dehydratase
CT43_CH1247	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH1248	COG3243	poly(R)-hydroxyalkanoic acid synthase
CT43_CH1250	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CT43_CH1253	COG1840	ABC-type Fe3 transport system, periplasmic component
CT43_CH1254	COG3842	ATPase activity
CT43_CH1259	COG1349	DNA-binding transcription factor activity
CT43_CH1262	COG0235	Class ii aldolase
CT43_CH1264	COG2861	carbohydrate metabolic process
CT43_CH1266	COG3852	Histidine kinase
CT43_CH1267	COG1846	Transcriptional regulator
CT43_CH1269	COG2318	DinB family
CT43_CH1271	COG5002	protein histidine kinase activity
CT43_CH1273	COG0720	synthase
CT43_CH1276	COG4873	Protein conserved in bacteria
CT43_CH1282	COG1780	Probably involved in ribonucleotide reductase function
CT43_CH1283	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CT43_CH1284	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CT43_CH1285	COG1725	Transcriptional regulator
CT43_CH1286	COG1131	(ABC) transporter
CT43_CH1288	COG1131	(ABC) transporter
CT43_CH1292	COG1522	sequence-specific DNA binding
CT43_CH1294	COG1335	isochorismatase
CT43_CH1296	COG1619	proteins homologs of microcin C7 resistance protein MccF
CT43_CH1297	COG2070	2-Nitropropane dioxygenase
CT43_CH1298	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CT43_CH1300	COG1696	Membrane protein involved in D-alanine export
CT43_CH1305	COG0716	FMN binding
CT43_CH1316	COG1846	Transcriptional regulator
CT43_CH1319	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CT43_CH1320	COG4709	membrane
CT43_CH1321	COG3874	Sporulation protein YtfJ
CT43_CH1325	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CT43_CH1326	COG0028	Belongs to the TPP enzyme family
CT43_CH1327	COG0440	acetolactate synthase activity
CT43_CH1342	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CT43_CH1345	COG1183	phosphatidylcholine synthase activity
CT43_CH1346	COG1368	sulfuric ester hydrolase activity
CT43_CH1348	COG0019	diaminopimelate decarboxylase activity
CT43_CH1352	COG0529	Catalyzes the synthesis of activated sulfate
CT43_CH1353	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CT43_CH1357	COG1648	precorrin-2 dehydrogenase activity
CT43_CH1358	COG0733	neurotransmitter:sodium symporter activity
CT43_CH1363	COG1757	Na H antiporter
CT43_CH1367	COG4758	membrane
CT43_CH1368	COG4585	Histidine kinase
CT43_CH1369	COG2197	response regulator
CT43_CH1371	COG1114	Component of the transport system for branched-chain amino acids
CT43_CH1372	COG2226	methyltransferase
CT43_CH1380	COG0730	response to heat
CT43_CH1381	COG0306	phosphate transporter
CT43_CH1382	COG1392	Phosphate transport regulator
CT43_CH1383	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CT43_CH1386	COG3852	Histidine kinase
CT43_CH1387	COG1801	Protein of unknown function DUF72
CT43_CH1389	COG0582	viral genome integration into host DNA
CT43_CH1390	COG5002	protein histidine kinase activity
CT43_CH1393	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CT43_CH1393	COG0392	lysyltransferase activity
CT43_CH1396	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CT43_CH1397	COG1686	Belongs to the peptidase S11 family
CT43_CH1398	COG2715	membrane protein required for spore maturation
CT43_CH1399	COG0700	Nucleoside recognition
CT43_CH1400	COG1187	pseudouridine synthase activity
CT43_CH1402	COG1333	cytochrome c biogenesis protein
CT43_CH1403	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CT43_CH1404	COG0745	RESPONSE REGULATOR receiver
CT43_CH1405	COG5002	protein histidine kinase activity
CT43_CH1406	COG2096	Adenosyltransferase
CT43_CH1409	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CT43_CH1410	COG1141	Ferredoxin
CT43_CH1412	COG0514	ATP-dependent DNA helicase (RecQ)
CT43_CH1413	COG1266	CAAX protease self-immunity
CT43_CH1415	COG1408	metallophosphoesterase
CT43_CH1416	COG0789	Transcriptional regulator
CT43_CH1418	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CT43_CH1422	COG0492	ferredoxin-NADP+ reductase activity
CT43_CH1423	COG0252	asparaginase activity
CT43_CH1436	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CT43_CH1439	COG0142	geranyltranstransferase activity
CT43_CH1441	COG0142	geranyltranstransferase activity
CT43_CH1446	COG0457	Tetratricopeptide repeat
CT43_CH1450	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CT43_CH1451	COG2010	Cytochrome c
CT43_CH1451	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CT43_CH1452	COG4347	Protein of unknown function (DUF1405)
CT43_CH1455	COG2738	Putative neutral zinc metallopeptidase
CT43_CH1457	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH1458	COG1694	Mazg nucleotide pyrophosphohydrolase
CT43_CH1462	COG0438	transferase activity, transferring glycosyl groups
CT43_CH1469	COG1199	ATP-dependent helicase activity
CT43_CH1469	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CT43_CH1473	COG3935	DnaD domain protein
CT43_CH1474	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CT43_CH1476	COG4499	WXG100 protein secretion system (Wss), protein YukC
CT43_CH1476	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CT43_CH1487	COG0116	Belongs to the methyltransferase superfamily
CT43_CH1490	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CT43_CH1492	COG0024	Methionine aminopeptidase
CT43_CH1494	COG2233	PERMEase
CT43_CH1495	COG2311	Membrane
CT43_CH1497	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CT43_CH1499	COG0456	acetyltransferase
CT43_CH1507	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CT43_CH1510	COG3944	biosynthesis protein
CT43_CH1512	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CT43_CH1515	COG1215	transferase activity, transferring glycosyl groups
CT43_CH1516	COG0438	transferase activity, transferring glycosyl groups
CT43_CH1519	COG0454	-acetyltransferase
CT43_CH1523	COG0328	RNA-DNA hybrid ribonuclease activity
CT43_CH1530	COG3403	YqcI/YcgG family
CT43_CH1531	COG1280	lysine exporter protein (LysE YggA)
CT43_CH1535	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CT43_CH1536	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CT43_CH1538	COG0475	glutathione-regulated potassium exporter activity
CT43_CH1539	COG4978	Transcriptional regulator
CT43_CH1539	COG0789	Transcriptional regulator
CT43_CH1541	COG2323	membrane
CT43_CH1542	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CT43_CH1554	COG1923	regulation of RNA biosynthetic process
CT43_CH1556	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CT43_CH1556	COG1776	CheC inhibitor of MCP methylation
CT43_CH1559	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CT43_CH1563	COG1256	bacterial-type flagellum assembly
CT43_CH1564	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CT43_CH1568	COG1815	bacterial-type flagellum-dependent cell motility
CT43_CH1569	COG1558	bacterial-type flagellum-dependent cell motility
CT43_CH1570	COG1677	Flagellar hook-basal body complex protein FliE
CT43_CH1571	COG1766	The M ring may be actively involved in energy transduction
CT43_CH1572	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CT43_CH1574	COG1157	protein secretion by the type III secretion system
CT43_CH1578	COG1749	Flagellar hook protein flgE
CT43_CH1581	COG0784	Response regulator, receiver
CT43_CH1581	COG0835	chemotaxis
CT43_CH1583	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CT43_CH1584	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CT43_CH1585	COG0741	lytic transglycosylase activity
CT43_CH1587	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CT43_CH1588	COG1776	CheC inhibitor of MCP methylation
CT43_CH1588	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CT43_CH1590	COG1338	Plays a role in the flagellum-specific transport system
CT43_CH1591	COG1987	bacterial-type flagellum assembly
CT43_CH1593	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CT43_CH1594	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CT43_CH1595	COG1419	protein localization to endoplasmic reticulum
CT43_CH1596	COG4786	Flagellar basal body rod
CT43_CH1598	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CT43_CH1604	COG2329	Antibiotic biosynthesis monooxygenase
CT43_CH1611	COG3842	ATPase activity
CT43_CH1613	COG1177	transmembrane transport
CT43_CH1622	COG0406	alpha-ribazole phosphatase activity
CT43_CH1628	COG0367	asparagine synthase
CT43_CH1634	COG1802	Transcriptional regulator
CT43_CH1635	COG0697	spore germination
CT43_CH1637	COG0523	cobalamin synthesis protein
CT43_CH1638	COG0701	Predicted permease
CT43_CH1642	COG1757	Na H antiporter
CT43_CH1643	COG0789	Transcriptional regulator
CT43_CH1649	COG0534	Mate efflux family protein
CT43_CH1650	COG3340	Belongs to the peptidase S51 family
CT43_CH1654	COG0785	Cytochrome C biogenesis protein
CT43_CH1655	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CT43_CH1658	COG0457	Tetratricopeptide repeat
CT43_CH1662	COG2733	membrane
CT43_CH1669	COG1131	(ABC) transporter
CT43_CH1672	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CT43_CH1673	COG0528	UMP kinase activity
CT43_CH1675	COG1027	Aspartate ammonia-lyase
CT43_CH1676	COG0281	malic enzyme
CT43_CH1677	COG4191	Histidine kinase
CT43_CH1678	COG0784	Response regulator, receiver
CT43_CH1679	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CT43_CH1691	COG1695	Transcriptional regulator
CT43_CH1693	COG0477	Major facilitator Superfamily
CT43_CH1696	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CT43_CH1697	COG2223	nitrite transmembrane transporter activity
CT43_CH1698	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CT43_CH1702	COG0733	neurotransmitter:sodium symporter activity
CT43_CH1704	COG5566	PFAM Mor transcription activator
CT43_CH1705	COG2323	membrane
CT43_CH1709	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CT43_CH1711	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CT43_CH1712	COG0028	Belongs to the TPP enzyme family
CT43_CH1716	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CT43_CH1720	COG2814	Major facilitator Superfamily
CT43_CH1721	COG3384	dioxygenase
CT43_CH1723	COG3279	Response regulator of the LytR AlgR family
CT43_CH1724	COG0427	acetyl-CoA hydrolase
CT43_CH1728	COG2814	Major facilitator Superfamily
CT43_CH1729	COG1309	transcriptional regulator
CT43_CH1730	COG4166	transmembrane transport
CT43_CH1731	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH1736	COG1914	H( )-stimulated, divalent metal cation uptake system
CT43_CH1739	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CT43_CH1741	COG0531	amino acid
CT43_CH1747	COG2309	aminopeptidase activity
CT43_CH1751	COG0456	acetyltransferase
CT43_CH1753	COG1266	CAAX protease self-immunity
CT43_CH1754	COG1309	transcriptional regulator
CT43_CH1755	COG2390	Transcriptional regulator
CT43_CH1757	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CT43_CH1758	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CT43_CH1760	COG4846	Membrane protein involved in cytochrome C biogenesis
CT43_CH1764	COG0583	DNA-binding transcription factor activity
CT43_CH1767	COG0006	proline dipeptidase activity
CT43_CH1769	COG2132	Multicopper oxidase
CT43_CH1775	COG1114	Component of the transport system for branched-chain amino acids
CT43_CH1777	COG1276	copper resistance
CT43_CH1777	COG2372	response to copper ion
CT43_CH1778	COG4549	nuclear export factor GLE1
CT43_CH1780	COG0697	spore germination
CT43_CH1781	COG0583	DNA-binding transcription factor activity
CT43_CH1782	COG1959	2 iron, 2 sulfur cluster binding
CT43_CH1783	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CT43_CH1784	COG0778	Nitroreductase
CT43_CH1786	COG0154	amidase activity
CT43_CH1793	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_CH1808	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CT43_CH1808	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CT43_CH1827	COG2002	toxin-antitoxin pair type II binding
CT43_CH1832	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CT43_CH1854	COG4824	toxin secretion phage lysis holin
CT43_CH1870	COG0154	amidase activity
CT43_CH1872	COG0628	permease
CT43_CH1874	COG0628	permease
CT43_CH1876	COG1231	oxidoreductase activity
CT43_CH1878	COG0523	cobalamin synthesis protein
CT43_CH1880	COG0411	ABC transporter
CT43_CH1884	COG0583	DNA-binding transcription factor activity
CT43_CH1886	COG1942	4-Oxalocrotonate Tautomerase
CT43_CH1890	COG1271	oxidase subunit
CT43_CH1891	COG1294	oxidase, subunit
CT43_CH1892	COG4988	ABC transporter
CT43_CH1893	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CT43_CH1895	COG1216	Glycosyl transferase, family 2
CT43_CH1903	COG1686	Belongs to the peptidase S11 family
CT43_CH1907	COG1388	LysM domain
CT43_CH1907	COG0791	NLP P60 protein
CT43_CH1909	COG1132	(ABC) transporter
CT43_CH1910	COG0745	RESPONSE REGULATOR receiver
CT43_CH1911	COG5002	protein histidine kinase activity
CT43_CH1913	COG0300	oxidoreductase activity
CT43_CH1916	COG0726	polysaccharide deacetylase
CT43_CH1921	COG0460	homoserine dehydrogenase
CT43_CH1926	COG1316	TRANSCRIPTIONal
CT43_CH1928	COG0745	RESPONSE REGULATOR receiver
CT43_CH1929	COG5002	protein histidine kinase activity
CT43_CH1930	COG0726	polysaccharide deacetylase
CT43_CH1932	COG1285	pathogenesis
CT43_CH1933	COG1247	-acetyltransferase
CT43_CH1935	COG4264	IucA IucC family
CT43_CH1936	COG0318	PFAM AMP-dependent synthetase and ligase
CT43_CH1939	COG1082	Xylose isomerase domain protein TIM barrel
CT43_CH1941	COG2814	Major facilitator Superfamily
CT43_CH1942	COG1279	arginine transmembrane transporter activity
CT43_CH1943	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH1945	COG1752	Esterase of the alpha-beta hydrolase superfamily
CT43_CH1952	COG0577	efflux transmembrane transporter activity
CT43_CH1953	COG2002	toxin-antitoxin pair type II binding
CT43_CH1954	COG1404	Belongs to the peptidase S8 family
CT43_CH1955	COG0640	Transcriptional regulator
CT43_CH1956	COG0667	Aldo Keto reductase
CT43_CH1957	COG2814	Major facilitator Superfamily
CT43_CH1962	COG0840	transmembrane signaling receptor activity
CT43_CH1965	COG3949	Membrane
CT43_CH1966	COG0783	Belongs to the Dps family
CT43_CH1969	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CT43_CH1971	COG1231	oxidoreductase activity
CT43_CH1972	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH1973	COG4989	oxidoreductase activity
CT43_CH1974	COG0523	cobalamin synthesis protein
CT43_CH1975	COG0456	acetyltransferase
CT43_CH1976	COG0803	Belongs to the bacterial solute-binding protein 9 family
CT43_CH1978	COG0702	epimerase
CT43_CH1982	COG4166	transmembrane transport
CT43_CH1987	COG5337	Spore coat protein CotH
CT43_CH1988	COG1051	belongs to the nudix hydrolase family
CT43_CH1989	COG0586	Pfam SNARE associated Golgi protein
CT43_CH1990	COG2244	polysaccharide biosynthetic process
CT43_CH1992	COG0701	Predicted permease
CT43_CH1993	COG3689	TIGRFAM TIGR03943 family protein
CT43_CH1994	COG1607	acyl-coa hydrolase
CT43_CH1995	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CT43_CH1998	COG0702	epimerase
CT43_CH1999	COG2839	Protein conserved in bacteria
CT43_CH2000	COG1253	flavin adenine dinucleotide binding
CT43_CH2005	COG1114	Component of the transport system for branched-chain amino acids
CT43_CH2006	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CT43_CH2009	COG0860	N-Acetylmuramoyl-L-alanine amidase
CT43_CH2011	COG1876	peptidase activity
CT43_CH2014	COG2211	Major facilitator Superfamily
CT43_CH2017	COG0860	N-Acetylmuramoyl-L-alanine amidase
CT43_CH2019	COG0561	phosphatase activity
CT43_CH2020	COG1846	Transcriptional regulator
CT43_CH2021	COG2814	Major facilitator Superfamily
CT43_CH2023	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CT43_CH2027	COG1819	glycosyl
CT43_CH2028	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH2029	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH2035	COG0456	acetyltransferase
CT43_CH2045	COG3874	Sporulation protein YtfJ
CT43_CH2050	COG2226	methyltransferase
CT43_CH2054	COG1082	Xylose isomerase domain protein TIM barrel
CT43_CH2055	COG0346	lactoylglutathione lyase activity
CT43_CH2057	COG0604	alcohol dehydrogenase
CT43_CH2058	COG1595	DNA-templated transcription, initiation
CT43_CH2061	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CT43_CH2061	COG0426	domain, Protein
CT43_CH2063	COG0386	Belongs to the glutathione peroxidase family
CT43_CH2064	COG1305	Transglutaminase-like
CT43_CH2065	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CT43_CH2066	COG0714	Associated with various cellular activities
CT43_CH2067	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CT43_CH2068	COG1140	nitrate reductase beta subunit
CT43_CH2069	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CT43_CH2070	COG2181	nitrate reductase activity
CT43_CH2071	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CT43_CH2072	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CT43_CH2073	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CT43_CH2074	COG0303	'Molybdopterin
CT43_CH2075	COG0314	molybdopterin synthase activity
CT43_CH2077	COG2223	nitrite transmembrane transporter activity
CT43_CH2080	COG1648	precorrin-2 dehydrogenase activity
CT43_CH2082	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CT43_CH2082	COG1587	Uroporphyrinogen-III synthase
CT43_CH2083	COG2146	nitrite reductase [NAD(P)H] activity
CT43_CH2084	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CT43_CH2085	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CT43_CH2092	COG2359	stage V sporulation protein S
CT43_CH2097	COG1418	mRNA catabolic process
CT43_CH2098	COG0488	(ABC) transporter
CT43_CH2101	COG0629	single-stranded DNA binding
CT43_CH2104	COG1413	lyase activity
CT43_CH2107	COG2136	Putative SAM-dependent methyltransferase
CT43_CH2107	COG2521	methyltransferase
CT43_CH2108	COG0018	arginyl-trna synthetase
CT43_CH2116	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CT43_CH2117	COG0017	Asparaginyl-tRNA synthetase
CT43_CH2121	COG1674	ftsk spoiiie
CT43_CH2135	COG0733	neurotransmitter:sodium symporter activity
CT43_CH2140	COG2610	gluconate transmembrane transporter activity
CT43_CH2142	COG1794	racemase activity, acting on amino acids and derivatives
CT43_CH2144	COG0456	acetyltransferase
CT43_CH2146	COG3655	Transcriptional regulator
CT43_CH2147	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CT43_CH2149	COG1131	(ABC) transporter
CT43_CH2150	COG4473	ABC transporter
CT43_CH2152	COG0546	phosphoglycolate phosphatase activity
CT43_CH2155	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CT43_CH2158	COG0768	penicillin binding
CT43_CH2160	COG0204	Acyl-transferase
CT43_CH2161	COG1272	protein, Hemolysin III
CT43_CH2163	COG0805	protein transport
CT43_CH2165	COG1307	EDD domain protein, DegV family
CT43_CH2167	COG1999	signal sequence binding
CT43_CH2168	COG0071	Belongs to the small heat shock protein (HSP20) family
CT43_CH2169	COG0367	asparagine synthase
CT43_CH2172	COG0860	N-Acetylmuramoyl-L-alanine amidase
CT43_CH2173	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CT43_CH2174	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CT43_CH2177	COG1335	isochorismatase
CT43_CH2178	COG1051	belongs to the nudix hydrolase family
CT43_CH2179	COG0668	transmembrane transport
CT43_CH2180	COG4585	Histidine kinase
CT43_CH2180	COG2203	Gaf domain
CT43_CH2181	COG2197	response regulator
CT43_CH2182	COG1737	Transcriptional regulator
CT43_CH2183	COG0384	phenazine biosynthesis protein PhzF
CT43_CH2184	COG1064	alcohol dehydrogenase
CT43_CH2191	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CT43_CH2198	COG1125	glycine betaine transport
CT43_CH2198	COG0517	IMP dehydrogenase activity
CT43_CH2199	COG1174	glycine betaine transport
CT43_CH2206	COG1253	flavin adenine dinucleotide binding
CT43_CH2207	COG1012	belongs to the aldehyde dehydrogenase family
CT43_CH2208	COG5506	Protein of unknown function (DUF1694)
CT43_CH2211	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CT43_CH2212	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CT43_CH2213	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CT43_CH2214	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CT43_CH2215	COG0456	acetyltransferase
CT43_CH2216	COG3829	transcription factor binding
CT43_CH2217	COG1509	lysine 2,3-aminomutase activity
CT43_CH2224	COG4991	sh3 domain protein
CT43_CH2224	COG3064	Membrane
CT43_CH2224	COG0515	serine threonine protein kinase
CT43_CH2226	COG0671	phosphoesterase, PA-phosphatase related
CT43_CH2227	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CT43_CH2228	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CT43_CH2241	COG0300	oxidoreductase activity
CT43_CH2245	COG4499	WXG100 protein secretion system (Wss), protein YukC
CT43_CH2245	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CT43_CH2246	COG2814	Major facilitator Superfamily
CT43_CH2247	COG4841	protein insertion into membrane
CT43_CH2248	COG0372	Belongs to the citrate synthase family
CT43_CH2249	COG2079	MmgE PrpD family protein
CT43_CH2250	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CT43_CH2251	COG1960	acyl-CoA dehydrogenase activity
CT43_CH2252	COG2084	Dehydrogenase
CT43_CH2254	COG1280	lysine exporter protein (LysE YggA)
CT43_CH2255	COG1024	Enoyl-CoA hydratase
CT43_CH2258	COG0420	3'-5' exonuclease activity
CT43_CH2259	COG0419	ATPase involved in DNA repair
CT43_CH2264	COG2223	nitrite transmembrane transporter activity
CT43_CH2265	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH2266	COG1169	isochorismate synthase
CT43_CH2267	COG1021	2,3-dihydroxybenzoate-AMP ligase
CT43_CH2268	COG1535	isochorismatase
CT43_CH2268	COG3433	isochorismatase activity
CT43_CH2269	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CT43_CH2270	COG3251	PFAM MbtH domain protein
CT43_CH2271	COG2814	Major facilitator Superfamily
CT43_CH2274	COG0776	regulation of translation
CT43_CH2276	COG2318	DinB family
CT43_CH2278	COG1115	amino acid carrier protein
CT43_CH2282	COG1187	pseudouridine synthase activity
CT43_CH2283	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CT43_CH2284	COG1136	(ABC) transporter
CT43_CH2286	COG2814	Major facilitator Superfamily
CT43_CH2289	COG0028	Belongs to the TPP enzyme family
CT43_CH2296	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CT43_CH2300	COG1846	Transcriptional regulator
CT43_CH2302	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH2309	COG1247	-acetyltransferase
CT43_CH2316	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH2322	COG0583	DNA-binding transcription factor activity
CT43_CH2323	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CT43_CH2327	COG0583	DNA-binding transcription factor activity
CT43_CH2328	COG2258	MOSC domain
CT43_CH2331	COG1132	(ABC) transporter
CT43_CH2332	COG1132	(ABC) transporter
CT43_CH2342	COG0582	viral genome integration into host DNA
CT43_CH2348	COG5484	DNA packaging
CT43_CH2351	COG5632	N-Acetylmuramoyl-L-alanine amidase
CT43_CH2356	COG1396	sequence-specific DNA binding
CT43_CH2362	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CT43_CH2363	COG1595	DNA-templated transcription, initiation
CT43_CH2368	COG1649	PFAM Uncharacterised BCR, COG1649
CT43_CH2373	COG2971	BadF BadG BcrA BcrD
CT43_CH2377	COG1846	Transcriptional regulator
CT43_CH2380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH2388	COG0500	methyltransferase
CT43_CH2388	COG3615	Tellurite resistance protein tehB
CT43_CH2390	COG2226	methyltransferase
CT43_CH2391	COG3961	Belongs to the TPP enzyme family
CT43_CH2392	COG1846	Transcriptional regulator
CT43_CH2399	COG2195	Cleaves the N-terminal amino acid of tripeptides
CT43_CH2405	COG2002	toxin-antitoxin pair type II binding
CT43_CH2407	COG0730	response to heat
CT43_CH2408	COG0110	maltose O-acetyltransferase activity
CT43_CH2409	COG1686	Belongs to the peptidase S11 family
CT43_CH2412	COG2814	Major facilitator Superfamily
CT43_CH2420	COG1115	amino acid carrier protein
CT43_CH2421	COG2066	Belongs to the glutaminase family
CT43_CH2422	COG4191	Histidine kinase
CT43_CH2423	COG0784	Response regulator, receiver
CT43_CH2425	COG0697	spore germination
CT43_CH2426	COG0531	amino acid
CT43_CH2428	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CT43_CH2429	COG0531	amino acid
CT43_CH2430	COG0322	excinuclease ABC activity
CT43_CH2432	COG2207	Transcriptional regulator
CT43_CH2437	COG5002	protein histidine kinase activity
CT43_CH2439	COG2267	carboxylic ester hydrolase activity
CT43_CH2451	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_CH2453	COG0768	penicillin binding
CT43_CH2454	COG1595	DNA-templated transcription, initiation
CT43_CH2456	COG0768	penicillin binding
CT43_CH2460	COG1408	metallophosphoesterase
CT43_CH2462	COG1131	(ABC) transporter
CT43_CH2464	COG1309	transcriptional regulator
CT43_CH2467	COG1960	acyl-CoA dehydrogenase activity
CT43_CH2468	COG0439	Biotin carboxylase
CT43_CH2469	COG0511	ligase activity, forming carbon-carbon bonds
CT43_CH2470	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CT43_CH2471	COG1024	Enoyl-CoA hydratase
CT43_CH2472	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CT43_CH2473	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CT43_CH2476	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_CH2482	COG1686	Belongs to the peptidase S11 family
CT43_CH2487	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CT43_CH2490	COG3227	Zinc metalloprotease (Elastase)
CT43_CH2491	COG2207	Transcriptional regulator
CT43_CH2497	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CT43_CH2499	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH2503	COG1733	regulation of RNA biosynthetic process
CT43_CH2511	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH2513	COG2368	4-hydroxyphenylacetate
CT43_CH2516	COG1063	alcohol dehydrogenase
CT43_CH2518	COG2323	membrane
CT43_CH2520	COG0693	protein deglycase activity
CT43_CH2522	COG3386	PFAM SMP-30 Gluconolaconase
CT43_CH2524	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
CT43_CH2525	COG3773	Cell wall hydrolase
CT43_CH2527	COG0745	RESPONSE REGULATOR receiver
CT43_CH2528	COG2205	protein histidine kinase activity
CT43_CH2533	COG1136	(ABC) transporter
CT43_CH2534	COG0577	efflux transmembrane transporter activity
CT43_CH2538	COG0460	homoserine dehydrogenase
CT43_CH2539	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH2541	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CT43_CH2547	COG0582	viral genome integration into host DNA
CT43_CH2558	COG1484	DNA-dependent DNA replication
CT43_CH2562	COG2002	toxin-antitoxin pair type II binding
CT43_CH2577	COG0582	viral genome integration into host DNA
CT43_CH2582	COG5484	DNA packaging
CT43_CH2585	COG0740	serine-type endopeptidase activity
CT43_CH2597	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_CH2610	COG2124	cytochrome p450
CT43_CH2617	COG0561	phosphatase activity
CT43_CH2618	COG5002	protein histidine kinase activity
CT43_CH2621	COG1819	glycosyl
CT43_CH2622	COG1794	racemase activity, acting on amino acids and derivatives
CT43_CH2627	COG2205	protein histidine kinase activity
CT43_CH2639	COG0604	alcohol dehydrogenase
CT43_CH2640	COG0671	phosphoesterase, PA-phosphatase related
CT43_CH2656	COG0584	glycerophosphoryl diester phosphodiesterase
CT43_CH2660	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH2661	COG0697	spore germination
CT43_CH2670	COG2223	nitrite transmembrane transporter activity
CT43_CH2673	COG0592	DNA-directed DNA polymerase activity
CT43_CH2679	COG3878	Protein conserved in bacteria
CT43_CH2683	COG4667	esterase of the alpha-beta hydrolase superfamily
CT43_CH2691	COG0322	excinuclease ABC activity
CT43_CH2699	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CT43_CH2706	COG0745	RESPONSE REGULATOR receiver
CT43_CH2707	COG5002	protein histidine kinase activity
CT43_CH2709	COG1522	sequence-specific DNA binding
CT43_CH2712	COG1136	(ABC) transporter
CT43_CH2713	COG0577	efflux transmembrane transporter activity
CT43_CH2714	COG1073	alpha beta
CT43_CH2716	COG0076	glutamate decarboxylase activity
CT43_CH2719	COG1523	belongs to the glycosyl hydrolase 13 family
CT43_CH2720	COG3227	Zinc metalloprotease (Elastase)
CT43_CH2721	COG0737	Belongs to the 5'-nucleotidase family
CT43_CH2725	COG0201	protein transport
CT43_CH2728	COG0697	spore germination
CT43_CH2729	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH2731	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CT43_CH2737	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH2741	COG3409	Peptidoglycan-binding domain 1 protein
CT43_CH2741	COG3773	Cell wall hydrolase
CT43_CH2748	COG1309	transcriptional regulator
CT43_CH2749	COG1051	belongs to the nudix hydrolase family
CT43_CH2753	COG3284	Transcriptional regulator
CT43_CH2757	COG1349	DNA-binding transcription factor activity
CT43_CH2760	COG1959	2 iron, 2 sulfur cluster binding
CT43_CH2763	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CT43_CH2764	COG0508	dehydrogenase complex catalyzes the overall conversion of
CT43_CH2765	COG0022	dehydrogenase e1 component
CT43_CH2766	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CT43_CH2769	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH2770	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CT43_CH2770	COG0456	acetyltransferase
CT43_CH2778	COG4176	ABC-type proline glycine betaine transport system permease component
CT43_CH2779	COG4175	Glycine betaine
CT43_CH2779	COG0517	IMP dehydrogenase activity
CT43_CH2781	COG0740	serine-type endopeptidase activity
CT43_CH2785	COG2153	protein acetylation
CT43_CH2786	COG3397	chitin binding
CT43_CH2787	COG1819	glycosyl
CT43_CH2790	COG2205	protein histidine kinase activity
CT43_CH2792	COG2315	Protein conserved in bacteria
CT43_CH2803	COG0456	acetyltransferase
CT43_CH2804	COG3973	AAA domain
CT43_CH2806	COG2801	Transposase and inactivated derivatives
CT43_CH2811	COG0514	ATP-dependent DNA helicase (RecQ)
CT43_CH2816	COG4637	Psort location Cytoplasmic, score
CT43_CH2820	COG3397	chitin binding
CT43_CH2823	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CT43_CH2824	COG1115	amino acid carrier protein
CT43_CH2825	COG1012	belongs to the aldehyde dehydrogenase family
CT43_CH2826	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CT43_CH2828	COG3938	Belongs to the proline racemase family
CT43_CH2829	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CT43_CH2838	COG1078	dGTPase activity
CT43_CH2839	COG0586	Pfam SNARE associated Golgi protein
CT43_CH2841	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CT43_CH2843	COG4166	transmembrane transport
CT43_CH2845	COG4948	Mandelate Racemase Muconate Lactonizing
CT43_CH2848	COG0667	Aldo Keto reductase
CT43_CH2856	COG3850	Histidine kinase
CT43_CH2856	COG5002	protein histidine kinase activity
CT43_CH2857	COG0745	RESPONSE REGULATOR receiver
CT43_CH2864	COG1164	Oligoendopeptidase f
CT43_CH2865	COG1307	EDD domain protein, DegV family
CT43_CH2870	COG2814	Major facilitator Superfamily
CT43_CH2872	COG1664	Polymer-forming cytoskeletal
CT43_CH2873	COG0789	Transcriptional regulator
CT43_CH2874	COG4533	DNA binding
CT43_CH2875	COG0477	Major facilitator Superfamily
CT43_CH2875	COG2814	Major facilitator Superfamily
CT43_CH2881	COG2261	transglycosylase associated protein
CT43_CH2884	COG2226	methyltransferase
CT43_CH2892	COG0436	Aminotransferase
CT43_CH2893	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CT43_CH2895	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CT43_CH2898	COG1131	(ABC) transporter
CT43_CH2906	COG0628	permease
CT43_CH2908	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CT43_CH2909	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CT43_CH2910	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CT43_CH2918	COG2746	aminoglycoside 3-N-acetyltransferase activity
CT43_CH2920	COG0697	spore germination
CT43_CH2922	COG2318	DinB family
CT43_CH2926	COG4912	Dna alkylation repair
CT43_CH2928	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CT43_CH2929	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CT43_CH2930	COG0346	lactoylglutathione lyase activity
CT43_CH2931	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH2933	COG0726	polysaccharide deacetylase
CT43_CH2935	COG0861	Integral membrane protein TerC family
CT43_CH2936	COG1368	sulfuric ester hydrolase activity
CT43_CH2937	COG0488	(ABC) transporter
CT43_CH2938	COG2409	Drug exporters of the RND superfamily
CT43_CH2938	COG1033	growth of symbiont in host cell
CT43_CH2939	COG1309	transcriptional regulator
CT43_CH2942	COG0287	Prephenate dehydrogenase
CT43_CH2945	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CT43_CH2945	COG1605	Chorismate mutase
CT43_CH2954	COG3584	3D domain protein
CT43_CH2954	COG1388	LysM domain
CT43_CH2956	COG0277	FAD linked oxidase domain protein
CT43_CH2961	COG1879	ABC-type sugar transport system periplasmic component
CT43_CH2962	COG1172	Belongs to the binding-protein-dependent transport system permease family
CT43_CH2963	COG1172	Belongs to the binding-protein-dependent transport system permease family
CT43_CH2965	COG2390	Transcriptional regulator
CT43_CH2966	COG1070	Carbohydrate kinase
CT43_CH2970	COG2329	Antibiotic biosynthesis monooxygenase
CT43_CH2972	COG0640	Transcriptional regulator
CT43_CH2973	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CT43_CH2976	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CT43_CH2977	COG4187	Peptidase family M20/M25/M40
CT43_CH2978	COG1414	Transcriptional regulator
CT43_CH2979	COG0833	amino acid
CT43_CH2983	COG0825	malonyl-CoA metabolic process
CT43_CH2985	COG3239	Fatty acid desaturase
CT43_CH2987	COG2720	vancomycin resistance protein
CT43_CH2988	COG1785	Belongs to the alkaline phosphatase family
CT43_CH2990	COG3655	Transcriptional regulator
CT43_CH2994	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH2995	COG0346	lactoylglutathione lyase activity
CT43_CH3001	COG0714	Associated with various cellular activities
CT43_CH3005	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CT43_CH3006	COG0753	catalase activity
CT43_CH3013	COG0778	Nitroreductase
CT43_CH3014	COG1846	Transcriptional regulator
CT43_CH3018	COG4884	unkown
CT43_CH3018	COG3831	ATPase activity
CT43_CH3025	COG0456	acetyltransferase
CT43_CH3029	COG0697	spore germination
CT43_CH3030	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH3039	COG0730	response to heat
CT43_CH3041	COG0833	amino acid
CT43_CH3043	COG4335	DNA alkylation repair
CT43_CH3045	COG5002	protein histidine kinase activity
CT43_CH3046	COG0745	RESPONSE REGULATOR receiver
CT43_CH3048	COG1136	(ABC) transporter
CT43_CH3048	COG0577	efflux transmembrane transporter activity
CT43_CH3060	COG1984	allophanate hydrolase subunit 2
CT43_CH3061	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CT43_CH3062	COG1414	Transcriptional regulator
CT43_CH3065	COG3142	Participates in the control of copper homeostasis
CT43_CH3066	COG0640	Transcriptional regulator
CT43_CH3068	COG1960	acyl-CoA dehydrogenase activity
CT43_CH3076	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CT43_CH3083	COG0737	Belongs to the 5'-nucleotidase family
CT43_CH3084	COG2267	carboxylic ester hydrolase activity
CT43_CH3085	COG1335	isochorismatase
CT43_CH3089	COG0583	DNA-binding transcription factor activity
CT43_CH3090	COG1846	Transcriptional regulator
CT43_CH3091	COG0598	Magnesium transport protein CorA
CT43_CH3099	COG0814	amino acid
CT43_CH3104	COG0415	Belongs to the DNA photolyase family
CT43_CH3105	COG0288	reversible hydration of carbon dioxide
CT43_CH3107	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CT43_CH3108	COG5609	conserved protein (DUF2294)
CT43_CH3109	COG0726	polysaccharide deacetylase
CT43_CH3111	COG1575	Belongs to the MenA family. Type 1 subfamily
CT43_CH3113	COG0798	PFAM Bile acid sodium symporter
CT43_CH3114	COG0346	lactoylglutathione lyase activity
CT43_CH3115	COG0640	Transcriptional regulator
CT43_CH3117	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CT43_CH3118	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CT43_CH3118	COG3320	Male sterility
CT43_CH3128	COG2814	Major facilitator Superfamily
CT43_CH3129	COG1309	transcriptional regulator
CT43_CH3130	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH3131	COG1522	sequence-specific DNA binding
CT43_CH3134	COG0346	lactoylglutathione lyase activity
CT43_CH3145	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_CH3148	COG0745	RESPONSE REGULATOR receiver
CT43_CH3149	COG3850	Histidine kinase
CT43_CH3149	COG5002	protein histidine kinase activity
CT43_CH3157	COG1136	(ABC) transporter
CT43_CH3165	COG2814	Major facilitator Superfamily
CT43_CH3170	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CT43_CH3175	COG1690	Belongs to the RtcB family
CT43_CH3177	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CT43_CH3180	COG0277	FAD linked oxidase domain protein
CT43_CH3182	COG0577	efflux transmembrane transporter activity
CT43_CH3186	COG3850	Histidine kinase
CT43_CH3186	COG5002	protein histidine kinase activity
CT43_CH3188	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH3191	COG1619	proteins homologs of microcin C7 resistance protein MccF
CT43_CH3195	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CT43_CH3199	COG0662	Cupin 2, conserved barrel domain protein
CT43_CH3200	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CT43_CH3200	COG2207	Transcriptional regulator
CT43_CH3204	COG5632	N-Acetylmuramoyl-L-alanine amidase
CT43_CH3204	COG3409	Peptidoglycan-binding domain 1 protein
CT43_CH3208	COG1876	peptidase activity
CT43_CH3209	COG2843	Capsule synthesis protein
CT43_CH3211	COG0477	Major facilitator Superfamily
CT43_CH3214	COG1846	Transcriptional regulator
CT43_CH3215	COG2814	Major facilitator Superfamily
CT43_CH3220	COG2031	fatty acid transporter
CT43_CH3222	COG2249	NAD(P)H dehydrogenase (quinone) activity
CT43_CH3233	COG1288	antiporter activity
CT43_CH3234	COG2356	endonuclease I
CT43_CH3236	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CT43_CH3238	COG3620	sequence-specific DNA binding
CT43_CH3240	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CT43_CH3244	COG1733	regulation of RNA biosynthetic process
CT43_CH3245	COG0778	Nitroreductase
CT43_CH3251	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH3253	COG1131	(ABC) transporter
CT43_CH3258	COG1011	Hydrolase
CT43_CH3265	COG0346	lactoylglutathione lyase activity
CT43_CH3266	COG1940	carbohydrate kinase activity
CT43_CH3268	COG0110	maltose O-acetyltransferase activity
CT43_CH3269	COG0180	Tryptophanyl-tRNA synthetase
CT43_CH3271	COG0628	permease
CT43_CH3272	COG0628	permease
CT43_CH3278	COG0500	methyltransferase
CT43_CH3280	COG0477	Major facilitator Superfamily
CT43_CH3285	COG1253	flavin adenine dinucleotide binding
CT43_CH3286	COG0789	Transcriptional regulator
CT43_CH3288	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CT43_CH3294	COG0697	spore germination
CT43_CH3296	COG1357	PFAM Pentapeptide repeats (8 copies)
CT43_CH3297	COG3813	Protein conserved in bacteria
CT43_CH3298	COG2706	6-phosphogluconolactonase activity
CT43_CH3300	COG1070	Carbohydrate kinase
CT43_CH3303	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CT43_CH3304	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CT43_CH3305	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CT43_CH3306	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CT43_CH3307	COG0604	alcohol dehydrogenase
CT43_CH3308	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CT43_CH3310	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH3313	COG0840	transmembrane signaling receptor activity
CT43_CH3315	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CT43_CH3315	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CT43_CH3316	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CT43_CH3316	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CT43_CH3317	COG1733	regulation of RNA biosynthetic process
CT43_CH3320	COG0656	L-ascorbic acid biosynthetic process
CT43_CH3321	COG2814	Major facilitator Superfamily
CT43_CH3325	COG2824	Alkylphosphonate utilization operon protein PhnA
CT43_CH3326	COG0659	secondary active sulfate transmembrane transporter activity
CT43_CH3329	COG0814	amino acid
CT43_CH3336	COG1733	regulation of RNA biosynthetic process
CT43_CH3337	COG2188	Transcriptional regulator
CT43_CH3339	COG0673	inositol 2-dehydrogenase activity
CT43_CH3340	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CT43_CH3341	COG1733	regulation of RNA biosynthetic process
CT43_CH3342	COG1733	regulation of RNA biosynthetic process
CT43_CH3347	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH3352	COG0384	phenazine biosynthesis protein PhzF
CT43_CH3354	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH3356	COG0318	PFAM AMP-dependent synthetase and ligase
CT43_CH3357	COG2249	NAD(P)H dehydrogenase (quinone) activity
CT43_CH3358	COG1733	regulation of RNA biosynthetic process
CT43_CH3361	COG0726	polysaccharide deacetylase
CT43_CH3363	COG1191	sigma factor activity
CT43_CH3365	COG1280	lysine exporter protein (LysE YggA)
CT43_CH3375	COG1151	hydroxylamine reductase activity
CT43_CH3377	COG3757	hydrolase, family 25
CT43_CH3377	COG3409	Peptidoglycan-binding domain 1 protein
CT43_CH3383	COG2072	flavoprotein involved in K transport
CT43_CH3390	COG1113	amino acid transport
CT43_CH3391	COG2814	Major facilitator Superfamily
CT43_CH3398	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CT43_CH3399	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CT43_CH3402	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CT43_CH3403	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH3404	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH3405	COG3739	integral membrane protein
CT43_CH3411	COG0583	DNA-binding transcription factor activity
CT43_CH3418	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CT43_CH3419	COG1164	Oligoendopeptidase f
CT43_CH3423	COG3781	membrane
CT43_CH3426	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CT43_CH3431	COG0584	glycerophosphoryl diester phosphodiesterase
CT43_CH3434	COG0640	Transcriptional regulator
CT43_CH3435	COG0604	alcohol dehydrogenase
CT43_CH3437	COG0457	Tetratricopeptide repeat
CT43_CH3439	COG2808	Putative FMN-binding domain
CT43_CH3442	COG0277	FAD linked oxidase domain protein
CT43_CH3446	COG0823	Involved in the tonB-independent uptake of proteins
CT43_CH3447	COG3397	chitin binding
CT43_CH3449	COG0697	spore germination
CT43_CH3460	COG1309	transcriptional regulator
CT43_CH3463	COG1876	peptidase activity
CT43_CH3468	COG3852	Histidine kinase
CT43_CH3470	COG1285	pathogenesis
CT43_CH3473	COG2514	catechol 2,3-dioxygenase activity
CT43_CH3474	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CT43_CH3475	COG1126	abc transporter atp-binding protein
CT43_CH3476	COG0765	amino acid transport
CT43_CH3477	COG2720	vancomycin resistance protein
CT43_CH3483	COG1278	Cold shock
CT43_CH3485	COG0716	FMN binding
CT43_CH3487	COG1051	belongs to the nudix hydrolase family
CT43_CH3491	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH3493	COG0165	Argininosuccinate lyase
CT43_CH3496	COG4145	pantothenate transmembrane transporter activity
CT43_CH3498	COG1012	belongs to the aldehyde dehydrogenase family
CT43_CH3499	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH3501	COG1657	PFAM Prenyltransferase squalene oxidase
CT43_CH3502	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CT43_CH3503	COG2962	Rard protein
CT43_CH3504	COG3326	Membrane
CT43_CH3507	COG0489	protein tyrosine kinase activity
CT43_CH3509	COG0314	molybdopterin synthase activity
CT43_CH3510	COG0303	'Molybdopterin
CT43_CH3511	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CT43_CH3512	COG2116	formate transmembrane transporter activity
CT43_CH3514	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CT43_CH3515	COG5609	conserved protein (DUF2294)
CT43_CH3516	COG2427	Protein of unknown function (DUF1641)
CT43_CH3517	COG3383	formate dehydrogenase (NAD+) activity
CT43_CH3518	COG0697	spore germination
CT43_CH3521	COG0531	amino acid
CT43_CH3528	COG2226	methyltransferase
CT43_CH3529	COG4166	transmembrane transport
CT43_CH3530	COG2801	Transposase and inactivated derivatives
CT43_CH3532	COG4166	transmembrane transport
CT43_CH3533	COG4166	transmembrane transport
CT43_CH3534	COG1316	TRANSCRIPTIONal
CT43_CH3539	COG1131	(ABC) transporter
CT43_CH3543	COG0673	inositol 2-dehydrogenase activity
CT43_CH3544	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CT43_CH3545	COG0187	DNA topoisomerase II activity
CT43_CH3546	COG1832	CoA-binding protein
CT43_CH3547	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CT43_CH3550	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CT43_CH3550	COG1328	CTP reductase activity
CT43_CH3552	COG4841	protein insertion into membrane
CT43_CH3553	COG0824	Thioesterase
CT43_CH3560	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CT43_CH3561	COG2274	protein secretion by the type I secretion system
CT43_CH3562	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CT43_CH3564	COG0726	polysaccharide deacetylase
CT43_CH3568	COG2211	Major facilitator Superfamily
CT43_CH3570	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CT43_CH3573	COG0183	Belongs to the thiolase family
CT43_CH3574	COG0318	PFAM AMP-dependent synthetase and ligase
CT43_CH3575	COG1268	BioY protein
CT43_CH3576	COG0318	PFAM AMP-dependent synthetase and ligase
CT43_CH3577	COG1396	sequence-specific DNA binding
CT43_CH3584	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH3586	COG5002	protein histidine kinase activity
CT43_CH3587	COG0400	carboxylic ester hydrolase activity
CT43_CH3588	COG0346	lactoylglutathione lyase activity
CT43_CH3589	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CT43_CH3590	COG0069	glutamate synthase activity
CT43_CH3591	COG1902	pentaerythritol trinitrate reductase activity
CT43_CH3592	COG1329	Transcriptional regulator
CT43_CH3593	COG0010	Belongs to the arginase family
CT43_CH3598	COG2226	methyltransferase
CT43_CH3603	COG4846	Membrane protein involved in cytochrome C biogenesis
CT43_CH3604	COG0785	Cytochrome C biogenesis protein
CT43_CH3610	COG1131	(ABC) transporter
CT43_CH3613	COG0583	DNA-binding transcription factor activity
CT43_CH3615	COG1346	cytolysis
CT43_CH3618	COG0730	response to heat
CT43_CH3623	COG1132	(ABC) transporter
CT43_CH3624	COG1132	(ABC) transporter
CT43_CH3631	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CT43_CH3632	COG0737	Belongs to the 5'-nucleotidase family
CT43_CH3634	COG0737	Belongs to the 5'-nucleotidase family
CT43_CH3636	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CT43_CH3640	COG1695	Transcriptional regulator
CT43_CH3641	COG0174	glutamine synthetase
CT43_CH3642	COG0789	Transcriptional regulator
CT43_CH3643	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CT43_CH3644	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CT43_CH3645	COG2860	membrane
CT43_CH3647	COG0464	growth
CT43_CH3650	COG2801	Transposase and inactivated derivatives
CT43_CH3655	COG1388	LysM domain
CT43_CH3655	COG3584	3D domain protein
CT43_CH3656	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CT43_CH3656	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CT43_CH3656	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CT43_CH3657	COG1105	Belongs to the carbohydrate kinase PfkB family
CT43_CH3658	COG1349	DNA-binding transcription factor activity
CT43_CH3659	COG1979	alcohol dehydrogenase
CT43_CH3660	COG2322	membrane
CT43_CH3663	COG1113	amino acid transport
CT43_CH3665	COG1408	metallophosphoesterase
CT43_CH3666	COG2116	formate transmembrane transporter activity
CT43_CH3669	COG2217	Heavy metal translocating P-type atpase
CT43_CH3670	COG2608	mercury ion transmembrane transporter activity
CT43_CH3671	COG1937	Protein conserved in bacteria
CT43_CH3675	COG2819	hydrolase of the alpha beta superfamily
CT43_CH3676	COG1120	ATPase activity
CT43_CH3677	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH3678	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH3679	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CT43_CH3680	COG0708	Exodeoxyribonuclease III
CT43_CH3681	COG2169	Transcriptional regulator
CT43_CH3682	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CT43_CH3683	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CT43_CH3685	COG2364	Membrane
CT43_CH3688	COG2267	carboxylic ester hydrolase activity
CT43_CH3689	COG5001	Diguanylate cyclase
CT43_CH3689	COG3300	MHYT domain
CT43_CH3693	COG1086	Polysaccharide biosynthesis protein
CT43_CH3696	COG1346	cytolysis
CT43_CH3698	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CT43_CH3700	COG2188	Transcriptional regulator
CT43_CH3701	COG2723	6-phospho-beta-galactosidase activity
CT43_CH3703	COG1404	Belongs to the peptidase S8 family
CT43_CH3704	COG3773	Cell wall hydrolase
CT43_CH3706	COG1368	sulfuric ester hydrolase activity
CT43_CH3710	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CT43_CH3714	COG4550	Control of competence regulator ComK, YlbF/YmcA
CT43_CH3716	COG1013	pyruvate-flavodoxin oxidoreductase activity
CT43_CH3717	COG0674	pyruvate-flavodoxin oxidoreductase activity
CT43_CH3717	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CT43_CH3719	COG2359	stage V sporulation protein S
CT43_CH3720	COG1692	metallophosphoesterase
CT43_CH3724	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CT43_CH3725	COG1426	Protein conserved in bacteria
CT43_CH3728	COG0300	oxidoreductase activity
CT43_CH3729	COG0612	Peptidase, M16
CT43_CH3730	COG0612	Peptidase, M16
CT43_CH3735	COG2188	Transcriptional regulator
CT43_CH3738	COG0740	serine-type endopeptidase activity
CT43_CH3739	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CT43_CH3741	COG0527	aspartate kinase activity
CT43_CH3743	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CT43_CH3745	COG5444	nuclease activity
CT43_CH3751	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_CH3775	COG0582	viral genome integration into host DNA
CT43_CH3786	COG0305	Participates in initiation and elongation during chromosome replication
CT43_CH3793	COG1396	sequence-specific DNA binding
CT43_CH3799	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CT43_CH3800	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CT43_CH3801	COG1873	PFAM PRC-barrel domain
CT43_CH3802	COG0612	Peptidase, M16
CT43_CH3803	COG0726	polysaccharide deacetylase
CT43_CH3806	COG0196	riboflavin kinase activity
CT43_CH3809	COG1550	Protein conserved in bacteria
CT43_CH3811	COG1358	cellular component organization or biogenesis
CT43_CH3812	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CT43_CH3813	COG0195	Participates in both transcription termination and antitermination
CT43_CH3818	COG0750	zinc metalloprotease
CT43_CH3820	COG4589	Belongs to the CDS family
CT43_CH3831	COG4974	Belongs to the 'phage' integrase family
CT43_CH3833	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CT43_CH3834	COG0758	DNA mediated transformation
CT43_CH3835	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CT43_CH3843	COG1837	Belongs to the UPF0109 family
CT43_CH3845	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CT43_CH3847	COG0552	protein localization to endoplasmic reticulum
CT43_CH3848	COG1196	nuclear chromosome segregation
CT43_CH3851	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH3852	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CT43_CH3855	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CT43_CH3856	COG1461	Dihydroxyacetone kinase
CT43_CH3857	COG1302	Protein conserved in bacteria
CT43_CH3859	COG1564	THIamine pyrophosphokinase
CT43_CH3860	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CT43_CH3862	COG0515	serine threonine protein kinase
CT43_CH3862	COG2815	serine threonine protein kinase
CT43_CH3863	COG0631	protein serine/threonine phosphatase activity
CT43_CH3865	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CT43_CH3865	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CT43_CH3868	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CT43_CH3869	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CT43_CH3873	COG1561	YicC-like family, N-terminal region
CT43_CH3874	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CT43_CH3877	COG0006	proline dipeptidase activity
CT43_CH3880	COG3069	C4-dicarboxylate transmembrane transporter activity
CT43_CH3893	COG0564	pseudouridine synthase activity
CT43_CH3897	COG3599	regulation of cell shape
CT43_CH3898	COG2302	S4 RNA-binding domain
CT43_CH3899	COG0762	integral membrane protein
CT43_CH3901	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CT43_CH3903	COG1873	PFAM PRC-barrel domain
CT43_CH3904	COG1191	sigma factor activity
CT43_CH3905	COG1191	sigma factor activity
CT43_CH3907	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CT43_CH3908	COG0849	cell division
CT43_CH3911	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CT43_CH3912	COG0772	Belongs to the SEDS family
CT43_CH3916	COG0768	penicillin binding
CT43_CH3921	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CT43_CH3925	COG1399	metal-binding, possibly nucleic acid-binding protein
CT43_CH3927	COG3480	Lon protease (S16) C-terminal proteolytic domain
CT43_CH3928	COG1752	Esterase of the alpha-beta hydrolase superfamily
CT43_CH3929	COG3314	Sporulation integral membrane protein YlbJ
CT43_CH3931	COG0742	ribosomal rna small subunit methyltransferase
CT43_CH3934	COG3679	Belongs to the UPF0342 family
CT43_CH3935	COG0406	alpha-ribazole phosphatase activity
CT43_CH3938	COG2340	Cysteine-rich secretory protein family
CT43_CH3941	COG2801	Transposase and inactivated derivatives
CT43_CH3943	COG3344	reverse transcriptase
CT43_CH3945	COG3336	cytochrome c oxidase
CT43_CH3953	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CT43_CH3954	COG0772	Belongs to the SEDS family
CT43_CH3956	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CT43_CH3957	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CT43_CH3959	COG4896	Protein conserved in bacteria
CT43_CH3964	COG0483	inositol monophosphate 1-phosphatase activity
CT43_CH3968	COG1982	Orn Lys Arg decarboxylase major
CT43_CH3977	COG0022	dehydrogenase e1 component
CT43_CH3978	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CT43_CH3981	COG0561	phosphatase activity
CT43_CH3983	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CT43_CH3984	COG0569	domain protein
CT43_CH3988	COG0583	DNA-binding transcription factor activity
CT43_CH3989	COG0517	IMP dehydrogenase activity
CT43_CH3991	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CT43_CH3993	COG4703	Protein of unknown function (DUF1797)
CT43_CH3996	COG2200	EAL domain
CT43_CH3997	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH3998	COG1408	metallophosphoesterase
CT43_CH4006	COG2814	Major facilitator Superfamily
CT43_CH4010	COG3209	COG3209 Rhs family protein
CT43_CH4013	COG2205	protein histidine kinase activity
CT43_CH4016	COG0436	Aminotransferase
CT43_CH4017	COG1609	Transcriptional regulator
CT43_CH4018	COG3833	ABC-type maltose transport systems, permease component
CT43_CH4019	COG1175	transmembrane transport
CT43_CH4020	COG2182	Extracellular solute-binding protein
CT43_CH4022	COG0366	Alpha amylase catalytic
CT43_CH4023	COG3842	ATPase activity
CT43_CH4029	COG0183	Belongs to the thiolase family
CT43_CH4035	COG1695	Transcriptional regulator
CT43_CH4036	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH4040	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CT43_CH4041	COG0436	Aminotransferase
CT43_CH4048	COG2084	Dehydrogenase
CT43_CH4050	COG2199	diguanylate cyclase activity
CT43_CH4050	COG2203	Gaf domain
CT43_CH4051	COG0778	Nitroreductase
CT43_CH4056	COG1263	PTS System
CT43_CH4056	COG2190	(PTS) system
CT43_CH4056	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CT43_CH4058	COG3711	transcriptional antiterminator
CT43_CH4062	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CT43_CH4066	COG1547	Domain of unknown function (DUF309)
CT43_CH4067	COG0456	acetyltransferase
CT43_CH4068	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CT43_CH4069	COG4086	secreted protein
CT43_CH4070	COG0561	phosphatase activity
CT43_CH4071	COG0697	spore germination
CT43_CH4074	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CT43_CH4079	COG0733	neurotransmitter:sodium symporter activity
CT43_CH4083	COG1686	Belongs to the peptidase S11 family
CT43_CH4084	COG1725	Transcriptional regulator
CT43_CH4085	COG1131	(ABC) transporter
CT43_CH4089	COG1846	Transcriptional regulator
CT43_CH4092	COG0598	Magnesium transport protein CorA
CT43_CH4097	COG4974	Belongs to the 'phage' integrase family
CT43_CH4099	COG0735	belongs to the Fur family
CT43_CH4100	COG1300	Membrane
CT43_CH4105	COG0667	Aldo Keto reductase
CT43_CH4106	COG0656	L-ascorbic acid biosynthetic process
CT43_CH4107	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CT43_CH4107	COG0456	acetyltransferase
CT43_CH4109	COG0737	Belongs to the 5'-nucleotidase family
CT43_CH4109	COG4085	toxin activity
CT43_CH4109	COG1525	nuclease
CT43_CH4111	COG0596	Alpha beta hydrolase
CT43_CH4112	COG2056	Na+-H+ antiporter family
CT43_CH4113	COG0456	acetyltransferase
CT43_CH4114	COG1073	alpha beta
CT43_CH4117	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CT43_CH4117	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CT43_CH4118	COG0307	riboflavin synthase, alpha
CT43_CH4124	COG2226	methyltransferase
CT43_CH4124	COG1073	alpha beta
CT43_CH4127	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CT43_CH4130	COG0737	Belongs to the 5'-nucleotidase family
CT43_CH4132	COG1522	sequence-specific DNA binding
CT43_CH4140	COG5444	nuclease activity
CT43_CH4148	COG0300	oxidoreductase activity
CT43_CH4149	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH4150	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CT43_CH4151	COG1760	l-serine dehydratase
CT43_CH4152	COG1760	l-serine dehydratase
CT43_CH4158	COG1285	pathogenesis
CT43_CH4160	COG2195	Cleaves the N-terminal amino acid of tripeptides
CT43_CH4161	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH4163	COG1376	ErfK ybiS ycfS ynhG family protein
CT43_CH4164	COG4129	membrane
CT43_CH4165	COG1126	abc transporter atp-binding protein
CT43_CH4166	COG0765	amino acid transport
CT43_CH4167	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CT43_CH4171	COG2323	membrane
CT43_CH4172	COG0772	Belongs to the SEDS family
CT43_CH4173	COG0508	dehydrogenase complex catalyzes the overall conversion of
CT43_CH4174	COG0022	dehydrogenase e1 component
CT43_CH4175	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CT43_CH4176	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CT43_CH4178	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CT43_CH4179	COG0280	phosphate acetyltransferase
CT43_CH4180	COG3290	protein histidine kinase activity
CT43_CH4180	COG3829	transcription factor binding
CT43_CH4182	COG0584	glycerophosphoryl diester phosphodiesterase
CT43_CH4183	COG3093	addiction module antidote protein HigA
CT43_CH4186	COG0750	zinc metalloprotease
CT43_CH4187	COG0497	DNA recombination
CT43_CH4188	COG0497	DNA recombination
CT43_CH4190	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CT43_CH4192	COG0142	geranyltranstransferase activity
CT43_CH4197	COG1302	Protein conserved in bacteria
CT43_CH4198	COG0439	Biotin carboxylase
CT43_CH4199	COG0511	ligase activity, forming carbon-carbon bonds
CT43_CH4207	COG3854	ATPases associated with a variety of cellular activities
CT43_CH4212	COG0006	proline dipeptidase activity
CT43_CH4215	COG3872	metal-dependent enzyme
CT43_CH4217	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CT43_CH4224	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CT43_CH4226	COG1609	Transcriptional regulator
CT43_CH4228	COG2076	Multidrug Resistance protein
CT43_CH4229	COG2076	Multidrug Resistance protein
CT43_CH4236	COG1725	Transcriptional regulator
CT43_CH4242	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CT43_CH4255	COG1459	type II secretion system
CT43_CH4256	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CT43_CH4270	COG1410	methionine synthase
CT43_CH4270	COG0646	methionine synthase
CT43_CH4271	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CT43_CH4271	COG0646	methionine synthase
CT43_CH4272	COG0626	cystathionine gamma-synthase activity
CT43_CH4273	COG0626	cystathionine gamma-synthase activity
CT43_CH4277	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH4279	COG1940	carbohydrate kinase activity
CT43_CH4280	COG4483	Protein conserved in bacteria
CT43_CH4281	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CT43_CH4282	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CT43_CH4284	COG0704	Plays a role in the regulation of phosphate uptake
CT43_CH4286	COG0573	inorganic phosphate transmembrane transporter activity
CT43_CH4287	COG0573	inorganic phosphate transmembrane transporter activity
CT43_CH4288	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CT43_CH4290	COG0477	Major facilitator Superfamily
CT43_CH4291	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CT43_CH4296	COG0735	belongs to the Fur family
CT43_CH4297	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CT43_CH4298	COG1121	(ABC) transporter
CT43_CH4299	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH4305	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CT43_CH4306	COG2384	SAM-dependent methyltransferase
CT43_CH4308	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CT43_CH4309	COG0358	DNA primase activity
CT43_CH4313	COG0517	IMP dehydrogenase activity
CT43_CH4316	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CT43_CH4317	COG0295	cytidine deaminase activity
CT43_CH4318	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CT43_CH4320	COG1480	7TM receptor with intracellular HD hydrolase
CT43_CH4321	COG1702	phosphate starvation-inducible protein PhoH
CT43_CH4325	COG1610	YqeY-like protein
CT43_CH4327	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CT43_CH4328	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CT43_CH4334	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CT43_CH4335	COG1733	regulation of RNA biosynthetic process
CT43_CH4340	COG1466	dna polymerase III delta subunit
CT43_CH4342	COG2333	competence protein COMEC
CT43_CH4342	COG0658	competence protein
CT43_CH4343	COG2131	deaminase
CT43_CH4344	COG1555	photosystem II stabilization
CT43_CH4344	COG1596	polysaccharide export
CT43_CH4345	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CT43_CH4346	COG2226	methyltransferase
CT43_CH4347	COG0799	negative regulation of ribosome biogenesis
CT43_CH4348	COG1713	HD superfamily hydrolase involved in NAD metabolism
CT43_CH4350	COG1534	Rna-binding protein
CT43_CH4352	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CT43_CH4353	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CT43_CH4356	COG1191	sigma factor activity
CT43_CH4358	COG1595	DNA-templated transcription, initiation
CT43_CH4360	COG0778	Nitroreductase
CT43_CH4361	COG2357	RelA SpoT domain protein
CT43_CH4363	COG1785	Belongs to the alkaline phosphatase family
CT43_CH4365	COG2267	carboxylic ester hydrolase activity
CT43_CH4372	COG1404	Belongs to the peptidase S8 family
CT43_CH4374	COG3186	Phenylalanine-4-hydroxylase
CT43_CH4376	COG2514	catechol 2,3-dioxygenase activity
CT43_CH4377	COG2259	Doxx family
CT43_CH4385	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CT43_CH4388	COG1454	alcohol dehydrogenase
CT43_CH4388	COG1012	belongs to the aldehyde dehydrogenase family
CT43_CH4389	COG0626	cystathionine gamma-synthase activity
CT43_CH4390	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CT43_CH4395	COG0768	penicillin binding
CT43_CH4401	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CT43_CH4407	COG0628	permease
CT43_CH4411	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CT43_CH4414	COG1104	cysteine desulfurase activity
CT43_CH4415	COG1959	2 iron, 2 sulfur cluster binding
CT43_CH4416	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CT43_CH4418	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CT43_CH4423	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CT43_CH4425	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CT43_CH4425	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CT43_CH4426	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CT43_CH4427	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CT43_CH4427	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CT43_CH4429	COG2244	polysaccharide biosynthetic process
CT43_CH4430	COG2323	membrane
CT43_CH4432	COG1862	Preprotein translocase
CT43_CH4438	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CT43_CH4444	COG0157	Belongs to the NadC ModD family
CT43_CH4445	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CT43_CH4446	COG1104	cysteine desulfurase activity
CT43_CH4447	COG1827	regulation of RNA biosynthetic process
CT43_CH4448	COG2258	MOSC domain
CT43_CH4449	COG0077	Prephenate dehydratase
CT43_CH4450	COG0577	efflux transmembrane transporter activity
CT43_CH4451	COG0577	efflux transmembrane transporter activity
CT43_CH4452	COG1136	(ABC) transporter
CT43_CH4453	COG5002	protein histidine kinase activity
CT43_CH4454	COG0745	RESPONSE REGULATOR receiver
CT43_CH4456	COG3290	protein histidine kinase activity
CT43_CH4458	COG2868	ribosomal protein
CT43_CH4460	COG1530	ribonuclease E activity
CT43_CH4461	COG1994	Peptidase M50
CT43_CH4462	COG0739	heme binding
CT43_CH4463	COG2894	cell division
CT43_CH4466	COG1792	Involved in formation and maintenance of cell shape
CT43_CH4467	COG1077	Cell shape determining protein MreB Mrl
CT43_CH4471	COG0285	dihydrofolate synthase activity
CT43_CH4474	COG1388	LysM domain
CT43_CH4476	COG0113	porphobilinogen synthase activity
CT43_CH4477	COG1587	Uroporphyrinogen-III synthase
CT43_CH4479	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CT43_CH4481	COG1846	Transcriptional regulator
CT43_CH4482	COG1764	response to oxidative stress
CT43_CH4485	COG0470	DNA polymerase III
CT43_CH4485	COG1067	ATP-dependent peptidase activity
CT43_CH4505	COG3611	Membrane attachment protein
CT43_CH4511	COG0622	Phosphoesterase
CT43_CH4514	COG5401	PFAM Sporulation and spore germination
CT43_CH4518	COG1309	transcriptional regulator
CT43_CH4520	COG2197	response regulator
CT43_CH4521	COG2233	PERMEase
CT43_CH4522	COG0402	S-adenosylhomocysteine deaminase activity
CT43_CH4523	COG1983	PspC domain protein
CT43_CH4524	COG1396	sequence-specific DNA binding
CT43_CH4525	COG0697	spore germination
CT43_CH4527	COG1959	2 iron, 2 sulfur cluster binding
CT43_CH4528	COG1668	transmembrane transport
CT43_CH4529	COG4152	abc transporter atp-binding protein
CT43_CH4530	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CT43_CH4531	COG1360	Flagellar Motor Protein
CT43_CH4532	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CT43_CH4533	COG1876	peptidase activity
CT43_CH4534	COG0824	Thioesterase
CT43_CH4535	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CT43_CH4536	COG1053	succinate dehydrogenase
CT43_CH4537	COG2009	succinate dehydrogenase
CT43_CH4538	COG1719	4-vinyl reductase, 4VR
CT43_CH4540	COG3118	belongs to the thioredoxin family
CT43_CH4541	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CT43_CH4542	COG2086	electron transfer activity
CT43_CH4543	COG1024	Enoyl-CoA hydratase
CT43_CH4544	COG1309	transcriptional regulator
CT43_CH4545	COG0318	PFAM AMP-dependent synthetase and ligase
CT43_CH4550	COG2318	DinB family
CT43_CH4556	COG1131	(ABC) transporter
CT43_CH4557	COG2205	protein histidine kinase activity
CT43_CH4558	COG0745	RESPONSE REGULATOR receiver
CT43_CH4560	COG4895	conserved protein (DUF2196)
CT43_CH4561	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CT43_CH4563	COG4509	Sortase family
CT43_CH4564	COG1120	ATPase activity
CT43_CH4567	COG5386	Cell surface protein
CT43_CH4569	COG5386	Cell surface protein
CT43_CH4570	COG1114	Component of the transport system for branched-chain amino acids
CT43_CH4571	COG1187	pseudouridine synthase activity
CT43_CH4573	COG1796	DNA polymerase
CT43_CH4573	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CT43_CH4574	COG1286	toxin biosynthetic process
CT43_CH4581	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CT43_CH4583	COG1418	mRNA catabolic process
CT43_CH4587	COG2814	Major facilitator Superfamily
CT43_CH4588	COG1566	PFAM secretion protein HlyD family protein
CT43_CH4589	COG1309	transcriptional regulator
CT43_CH4590	COG1363	Peptidase, m42
CT43_CH4595	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CT43_CH4597	COG1484	DNA-dependent DNA replication
CT43_CH4598	COG3611	Membrane attachment protein
CT43_CH4600	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CT43_CH4602	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CT43_CH4603	COG0237	dephospho-CoA kinase activity
CT43_CH4604	COG1971	Probably functions as a manganese efflux pump
CT43_CH4606	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CT43_CH4606	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CT43_CH4607	COG5002	protein histidine kinase activity
CT43_CH4608	COG0745	RESPONSE REGULATOR receiver
CT43_CH4613	COG0538	isocitrate dehydrogenase activity
CT43_CH4614	COG0372	Belongs to the citrate synthase family
CT43_CH4616	COG0628	permease
CT43_CH4617	COG3030	protein affecting phage T7 exclusion by the F plasmid
CT43_CH4622	COG1725	Transcriptional regulator
CT43_CH4623	COG0281	malic enzyme
CT43_CH4624	COG0587	DNA-directed DNA polymerase activity
CT43_CH4627	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CT43_CH4631	COG4109	DRTGG domain
CT43_CH4634	COG0006	proline dipeptidase activity
CT43_CH4641	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH4642	COG0662	Cupin 2, conserved barrel domain protein
CT43_CH4645	COG1028	Short-chain dehydrogenase reductase Sdr
CT43_CH4646	COG0589	response to stress
CT43_CH4655	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH4660	COG0827	DNA restriction-modification system
CT43_CH4661	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CT43_CH4662	COG3874	Sporulation protein YtfJ
CT43_CH4665	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CT43_CH4667	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CT43_CH4670	COG1104	cysteine desulfurase activity
CT43_CH4672	COG0583	DNA-binding transcription factor activity
CT43_CH4673	COG0697	spore germination
CT43_CH4674	COG1309	transcriptional regulator
CT43_CH4675	COG1956	GAF domain-containing protein
CT43_CH4676	COG0626	cystathionine gamma-synthase activity
CT43_CH4682	COG1595	DNA-templated transcription, initiation
CT43_CH4684	COG0110	maltose O-acetyltransferase activity
CT43_CH4685	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CT43_CH4686	COG0454	-acetyltransferase
CT43_CH4687	COG0517	IMP dehydrogenase activity
CT43_CH4688	COG0123	including yeast histone deacetylase and acetoin utilization protein
CT43_CH4689	COG2267	carboxylic ester hydrolase activity
CT43_CH4691	COG0745	RESPONSE REGULATOR receiver
CT43_CH4692	COG5002	protein histidine kinase activity
CT43_CH4693	COG0666	response to abiotic stimulus
CT43_CH4699	COG1609	Transcriptional regulator
CT43_CH4701	COG4851	CamS sex pheromone cAM373 precursor
CT43_CH4702	COG3118	belongs to the thioredoxin family
CT43_CH4704	COG2309	aminopeptidase activity
CT43_CH4707	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH4708	COG0697	spore germination
CT43_CH4709	COG0789	Transcriptional regulator
CT43_CH4712	COG1674	ftsk spoiiie
CT43_CH4715	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CT43_CH4717	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CT43_CH4718	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CT43_CH4719	COG1363	Peptidase, m42
CT43_CH4721	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH4723	COG0510	thiamine kinase activity
CT43_CH4724	COG1523	belongs to the glycosyl hydrolase 13 family
CT43_CH4726	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CT43_CH4727	COG1349	DNA-binding transcription factor activity
CT43_CH4728	COG1187	pseudouridine synthase activity
CT43_CH4729	COG2244	polysaccharide biosynthetic process
CT43_CH4730	COG2081	HI0933 family
CT43_CH4731	COG2814	Major facilitator Superfamily
CT43_CH4733	COG3832	glyoxalase III activity
CT43_CH4737	COG1329	Transcriptional regulator
CT43_CH4742	COG0314	molybdopterin synthase activity
CT43_CH4743	COG1763	Mo-molybdopterin cofactor biosynthetic process
CT43_CH4744	COG0303	'Molybdopterin
CT43_CH4746	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CT43_CH4747	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CT43_CH4751	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CT43_CH4753	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CT43_CH4761	COG2814	Major facilitator Superfamily
CT43_CH4762	COG0475	glutathione-regulated potassium exporter activity
CT43_CH4763	COG0490	domain, Protein
CT43_CH4764	COG0582	viral genome integration into host DNA
CT43_CH4766	COG1136	(ABC) transporter
CT43_CH4772	COG1242	4 iron, 4 sulfur cluster binding
CT43_CH4773	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CT43_CH4774	COG1131	(ABC) transporter
CT43_CH4776	COG1794	racemase activity, acting on amino acids and derivatives
CT43_CH4780	COG2267	carboxylic ester hydrolase activity
CT43_CH4781	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CT43_CH4782	COG0671	phosphoesterase, PA-phosphatase related
CT43_CH4783	COG0438	transferase activity, transferring glycosyl groups
CT43_CH4800	COG5002	protein histidine kinase activity
CT43_CH4801	COG3852	Histidine kinase
CT43_CH4803	COG2267	carboxylic ester hydrolase activity
CT43_CH4804	COG1368	sulfuric ester hydrolase activity
CT43_CH4808	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CT43_CH4809	COG1116	anion transmembrane transporter activity
CT43_CH4810	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CT43_CH4815	COG0494	nUDIX hydrolase
CT43_CH4819	COG2076	Multidrug Resistance protein
CT43_CH4820	COG2076	Multidrug Resistance protein
CT43_CH4821	COG0789	Transcriptional regulator
CT43_CH4823	COG0288	reversible hydration of carbon dioxide
CT43_CH4824	COG1271	oxidase subunit
CT43_CH4825	COG1294	oxidase, subunit
CT43_CH4828	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH4832	COG1842	Phage shock protein A
CT43_CH4837	COG3859	Proton-coupled thiamine transporter YuaJ
CT43_CH4838	COG5002	protein histidine kinase activity
CT43_CH4839	COG0745	RESPONSE REGULATOR receiver
CT43_CH4845	COG1597	lipid kinase activity
CT43_CH4847	COG0577	efflux transmembrane transporter activity
CT43_CH4848	COG1136	(ABC) transporter
CT43_CH4850	COG0586	Pfam SNARE associated Golgi protein
CT43_CH4852	COG0577	efflux transmembrane transporter activity
CT43_CH4853	COG1136	(ABC) transporter
CT43_CH4854	COG3708	Transcriptional regulator
CT43_CH4854	COG2207	Transcriptional regulator
CT43_CH4856	COG5658	integral membrane protein
CT43_CH4857	COG0640	Transcriptional regulator
CT43_CH4858	COG0745	RESPONSE REGULATOR receiver
CT43_CH4859	COG2205	protein histidine kinase activity
CT43_CH4860	COG0577	efflux transmembrane transporter activity
CT43_CH4861	COG0577	efflux transmembrane transporter activity
CT43_CH4862	COG1136	(ABC) transporter
CT43_CH4863	COG0577	efflux transmembrane transporter activity
CT43_CH4872	COG3964	amidohydrolase
CT43_CH4876	COG4948	Mandelate Racemase Muconate Lactonizing
CT43_CH4878	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CT43_CH4879	COG0596	Alpha beta hydrolase
CT43_CH4881	COG1169	isochorismate synthase
CT43_CH4882	COG1575	Belongs to the MenA family. Type 1 subfamily
CT43_CH4883	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CT43_CH4884	COG1278	Cold shock
CT43_CH4889	COG0058	SHG alpha-glucan phosphorylase activity
CT43_CH4891	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CT43_CH4895	COG1404	Belongs to the peptidase S8 family
CT43_CH4898	COG1285	pathogenesis
CT43_CH4899	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CT43_CH4902	COG2155	Conserved Protein
CT43_CH4903	COG1098	S1 RNA binding domain
CT43_CH4904	COG0436	Aminotransferase
CT43_CH4905	COG1522	sequence-specific DNA binding
CT43_CH4906	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CT43_CH4907	COG2267	carboxylic ester hydrolase activity
CT43_CH4909	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CT43_CH4913	COG5018	Exonuclease
CT43_CH4914	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CT43_CH4917	COG0423	glycine-tRNA ligase activity
CT43_CH4918	COG2050	protein possibly involved in aromatic compounds catabolism
CT43_CH4920	COG1268	BioY protein
CT43_CH4921	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CT43_CH4922	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CT43_CH4926	COG2076	Multidrug Resistance protein
CT43_CH4927	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CT43_CH4929	COG3584	3D domain protein
CT43_CH4932	COG1252	NADH dehydrogenase
CT43_CH4935	COG3708	Transcriptional regulator
CT43_CH4938	COG1683	Conserved Protein
CT43_CH4949	COG4824	toxin secretion phage lysis holin
CT43_CH4975	COG1191	sigma factor activity
CT43_CH4980	COG3645	SOS response
CT43_CH4980	COG3646	Phage regulatory protein
CT43_CH4985	COG1396	sequence-specific DNA binding
CT43_CH4995	COG0316	Belongs to the HesB IscA family
CT43_CH4998	COG1252	NADH dehydrogenase
CT43_CH5000	COG2274	protein secretion by the type I secretion system
CT43_CH5001	COG0390	transport system, permease component
CT43_CH5002	COG2824	Alkylphosphonate utilization operon protein PhnA
CT43_CH5007	COG4837	Protein of unknown function (DUF1462)
CT43_CH5008	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CT43_CH5010	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CT43_CH5011	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CT43_CH5015	COG1358	cellular component organization or biogenesis
CT43_CH5017	COG2249	NAD(P)H dehydrogenase (quinone) activity
CT43_CH5018	COG0647	UMP catabolic process
CT43_CH5020	COG2445	Protein of unknown function DUF86
CT43_CH5021	COG1494	fructose-1,6-bisphosphatase
CT43_CH5025	COG4470	Protein conserved in bacteria
CT43_CH5027	COG0789	Transcriptional regulator
CT43_CH5028	COG4377	Putative membrane peptidase family (DUF2324)
CT43_CH5033	COG0739	heme binding
CT43_CH5035	COG3377	Domain of unknown function (DUF1805)
CT43_CH5036	COG0737	Belongs to the 5'-nucleotidase family
CT43_CH5037	COG0719	Fe-S assembly protein
CT43_CH5038	COG0822	iron-sulfur transferase activity
CT43_CH5039	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CT43_CH5040	COG0719	Fe-S assembly protein
CT43_CH5041	COG0396	ATPase activity
CT43_CH5042	COG1464	Belongs to the NlpA lipoprotein family
CT43_CH5043	COG1464	Belongs to the NlpA lipoprotein family
CT43_CH5044	COG2011	ABC-type metal ion transport system permease component
CT43_CH5047	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CT43_CH5048	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CT43_CH5050	COG1393	Belongs to the ArsC family
CT43_CH5058	COG0039	L-malate dehydrogenase activity
CT43_CH5063	COG1309	transcriptional regulator
CT43_CH5064	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CT43_CH5065	COG1960	acyl-CoA dehydrogenase activity
CT43_CH5066	COG0183	Belongs to the thiolase family
CT43_CH5067	COG1250	3-hydroxyacyl-CoA dehydrogenase
CT43_CH5067	COG1024	Enoyl-CoA hydratase
CT43_CH5069	COG1686	Belongs to the peptidase S11 family
CT43_CH5072	COG0011	TIGRFAM Protein of
CT43_CH5073	COG0840	transmembrane signaling receptor activity
CT43_CH5075	COG2814	Major facilitator Superfamily
CT43_CH5076	COG0531	amino acid
CT43_CH5082	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_CH5089	COG0586	Pfam SNARE associated Golgi protein
CT43_CH5091	COG1376	ErfK ybiS ycfS ynhG family protein
CT43_CH5092	COG0745	RESPONSE REGULATOR receiver
CT43_CH5093	COG5002	protein histidine kinase activity
CT43_CH5100	COG0840	transmembrane signaling receptor activity
CT43_CH5101	COG2151	metal-sulfur cluster biosynthetic enzyme
CT43_CH5102	COG3227	Zinc metalloprotease (Elastase)
CT43_CH5106	COG0586	Pfam SNARE associated Golgi protein
CT43_CH5107	COG0475	glutathione-regulated potassium exporter activity
CT43_CH5108	COG0490	domain, Protein
CT43_CH5109	COG1115	amino acid carrier protein
CT43_CH5110	COG0783	Belongs to the Dps family
CT43_CH5112	COG2318	DinB family
CT43_CH5114	COG1611	Belongs to the LOG family
CT43_CH5116	COG1528	Iron-storage protein
CT43_CH5118	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CT43_CH5119	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CT43_CH5121	COG1115	amino acid carrier protein
CT43_CH5122	COG1115	amino acid carrier protein
CT43_CH5123	COG2910	NAD(P)H-binding
CT43_CH5126	COG0656	L-ascorbic acid biosynthetic process
CT43_CH5127	COG2814	Major facilitator Superfamily
CT43_CH5128	COG1733	regulation of RNA biosynthetic process
CT43_CH5130	COG1252	NADH dehydrogenase
CT43_CH5131	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CT43_CH5141	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CT43_CH5142	COG3223	Belongs to the PsiE family
CT43_CH5144	COG1335	isochorismatase
CT43_CH5145	COG1522	sequence-specific DNA binding
CT43_CH5157	COG0557	exoribonuclease II activity
CT43_CH5158	COG1647	Serine aminopeptidase, S33
CT43_CH5159	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CT43_CH5160	COG1346	cytolysis
CT43_CH5167	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CT43_CH5170	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CT43_CH5173	COG4585	Histidine kinase
CT43_CH5178	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CT43_CH5181	COG2323	membrane
CT43_CH5183	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CT43_CH5185	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CT43_CH5187	COG1051	belongs to the nudix hydrolase family
CT43_CH5189	COG0492	ferredoxin-NADP+ reductase activity
CT43_CH5190	COG0457	Tetratricopeptide repeat
CT43_CH5191	COG0110	maltose O-acetyltransferase activity
CT43_CH5195	COG1950	PFAM Membrane protein of
CT43_CH5197	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CT43_CH5201	COG0789	Transcriptional regulator
CT43_CH5205	COG0583	DNA-binding transcription factor activity
CT43_CH5207	COG0655	NAD(P)H dehydrogenase (quinone) activity
CT43_CH5209	COG1132	(ABC) transporter
CT43_CH5210	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CT43_CH5211	COG3409	Peptidoglycan-binding domain 1 protein
CT43_CH5211	COG0793	Belongs to the peptidase S41A family
CT43_CH5212	COG2177	Part of the ABC transporter FtsEX involved in
CT43_CH5213	COG2884	Cell division ATP-binding protein ftsE
CT43_CH5217	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CT43_CH5219	COG1278	Cold shock
CT43_CH5220	COG1040	competence protein
CT43_CH5221	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CT43_CH5222	COG1388	LysM domain
CT43_CH5222	COG0791	NLP P60 protein
CT43_CH5223	COG1733	regulation of RNA biosynthetic process
CT43_CH5224	COG1307	EDD domain protein, DegV family
CT43_CH5225	COG1739	Uncharacterized protein family UPF0029
CT43_CH5226	COG1316	TRANSCRIPTIONal
CT43_CH5227	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CT43_CH5228	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CT43_CH5229	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CT43_CH5231	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CT43_CH5231	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CT43_CH5235	COG1486	melibiose metabolic process
CT43_CH5236	COG1447	Phosphotransferase system cellobiose-specific component IIA
CT43_CH5237	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CT43_CH5241	COG1447	Phosphotransferase system cellobiose-specific component IIA
CT43_CH5243	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CT43_CH5244	COG1301	dicarboxylic acid transport
CT43_CH5247	COG1511	domain protein
CT43_CH5248	COG0583	DNA-binding transcription factor activity
CT43_CH5249	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CT43_CH5251	COG1271	oxidase subunit
CT43_CH5252	COG1294	oxidase, subunit
CT43_CH5253	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CT43_CH5256	COG1620	l-lactate permease
CT43_CH5258	COG2389	metal-binding protein
CT43_CH5260	COG1368	sulfuric ester hydrolase activity
CT43_CH5264	COG0791	NLP P60 protein
CT43_CH5264	COG1388	LysM domain
CT43_CH5266	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CT43_CH5268	COG1215	transferase activity, transferring glycosyl groups
CT43_CH5270	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CT43_CH5271	COG3584	3D domain protein
CT43_CH5271	COG1388	LysM domain
CT43_CH5276	COG4715	Zinc finger, swim domain protein
CT43_CH5277	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CT43_CH5279	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_CH5284	COG1191	sigma factor activity
CT43_CH5286	COG0577	efflux transmembrane transporter activity
CT43_CH5287	COG1136	(ABC) transporter
CT43_CH5294	COG5002	protein histidine kinase activity
CT43_CH5295	COG0745	RESPONSE REGULATOR receiver
CT43_CH5296	COG1482	cell wall glycoprotein biosynthetic process
CT43_CH5297	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CT43_CH5297	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CT43_CH5297	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CT43_CH5298	COG3711	transcriptional antiterminator
CT43_CH5298	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CT43_CH5299	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CT43_CH5302	COG1482	cell wall glycoprotein biosynthetic process
CT43_CH5303	COG0662	Cupin 2, conserved barrel domain protein
CT43_CH5303	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CT43_CH5306	COG0438	transferase activity, transferring glycosyl groups
CT43_CH5308	COG0438	transferase activity, transferring glycosyl groups
CT43_CH5308	COG0297	glycogen (starch) synthase activity
CT43_CH5309	COG0110	maltose O-acetyltransferase activity
CT43_CH5313	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CT43_CH5314	COG4464	protein tyrosine phosphatase activity
CT43_CH5315	COG0489	protein tyrosine kinase activity
CT43_CH5316	COG3944	biosynthesis protein
CT43_CH5317	COG0489	protein tyrosine kinase activity
CT43_CH5320	COG1609	Transcriptional regulator
CT43_CH5322	COG0739	heme binding
CT43_CH5325	COG3279	Response regulator of the LytR AlgR family
CT43_CH5326	COG2385	sporulation resulting in formation of a cellular spore
CT43_CH5327	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CT43_CH5329	COG4836	Membrane
CT43_CH5330	COG1007	ATP synthesis coupled electron transport
CT43_CH5331	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CT43_CH5332	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CT43_CH5334	COG0839	Belongs to the complex I subunit 6 family
CT43_CH5338	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CT43_CH5341	COG3300	MHYT domain
CT43_CH5341	COG5001	Diguanylate cyclase
CT43_CH5351	COG0356	it plays a direct role in the translocation of protons across the membrane
CT43_CH5358	COG0698	ribose 5-phosphate isomerase
CT43_CH5360	COG2190	(PTS) system
CT43_CH5361	COG2259	Doxx family
CT43_CH5362	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CT43_CH5365	COG0009	L-threonylcarbamoyladenylate synthase
CT43_CH5369	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CT43_CH5372	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CT43_CH5373	COG1494	fructose-1,6-bisphosphatase
CT43_CH5377	COG4821	SIS domain
CT43_CH5381	COG1960	acyl-CoA dehydrogenase activity
CT43_CH5382	COG1960	acyl-CoA dehydrogenase activity
CT43_CH5383	COG1250	3-hydroxyacyl-CoA dehydrogenase
CT43_CH5384	COG0183	Belongs to the thiolase family
CT43_CH5385	COG0247	lactate metabolic process
CT43_CH5385	COG2181	nitrate reductase activity
CT43_CH5386	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CT43_CH5388	COG5001	Diguanylate cyclase
CT43_CH5388	COG3300	MHYT domain
CT43_CH5391	COG3227	Zinc metalloprotease (Elastase)
CT43_CH5392	COG2197	response regulator
CT43_CH5393	COG4585	Histidine kinase
CT43_CH5394	COG0842	Transport permease protein
CT43_CH5395	COG1131	(ABC) transporter
CT43_CH5396	COG0024	Methionine aminopeptidase
CT43_CH5398	COG2234	aminopeptidase activity
CT43_CH5402	COG1595	DNA-templated transcription, initiation
CT43_CH5404	COG4506	Protein conserved in bacteria
CT43_CH5405	COG1619	proteins homologs of microcin C7 resistance protein MccF
CT43_CH5410	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CT43_CH5411	COG2814	Major facilitator Superfamily
CT43_CH5412	COG0789	Transcriptional regulator
CT43_CH5414	COG0584	glycerophosphoryl diester phosphodiesterase
CT43_CH5415	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CT43_CH5417	COG1994	Peptidase M50
CT43_CH5419	COG1078	dGTPase activity
CT43_CH5420	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CT43_CH5421	COG1120	ATPase activity
CT43_CH5422	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH5423	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CT43_CH5427	COG0280	phosphate acetyltransferase
CT43_CH5430	COG3773	Cell wall hydrolase
CT43_CH5432	COG2363	Small membrane protein
CT43_CH5434	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CT43_CH5435	COG2233	PERMEase
CT43_CH5436	COG0561	phosphatase activity
CT43_CH5437	COG2814	Major facilitator Superfamily
CT43_CH5439	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CT43_CH5440	COG1131	(ABC) transporter
CT43_CH5441	COG2755	lipolytic protein G-D-S-L family
CT43_CH5442	COG1609	Transcriptional regulator
CT43_CH5444	COG0460	homoserine dehydrogenase
CT43_CH5448	COG1011	Hydrolase
CT43_CH5449	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CT43_CH5451	COG2197	response regulator
CT43_CH5452	COG4585	Histidine kinase
CT43_CH5452	COG2203	Gaf domain
CT43_CH5453	COG0351	phosphomethylpyrimidine kinase
CT43_CH5454	COG3706	GGDEF domain
CT43_CH5455	COG2879	small protein
CT43_CH5456	COG1966	Carbon starvation protein
CT43_CH5457	COG3279	Response regulator of the LytR AlgR family
CT43_CH5461	COG0438	transferase activity, transferring glycosyl groups
CT43_CH5464	COG0840	transmembrane signaling receptor activity
CT43_CH5466	COG1607	acyl-coa hydrolase
CT43_CH5467	COG1216	Glycosyl transferase, family 2
CT43_CH5469	COG1216	Glycosyl transferase, family 2
CT43_CH5471	COG4485	Bacterial membrane protein, YfhO
CT43_CH5472	COG0463	Glycosyl transferase, family 2
CT43_CH5474	COG1309	transcriptional regulator
CT43_CH5475	COG0488	(ABC) transporter
CT43_CH5476	COG1309	transcriptional regulator
CT43_CH5477	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CT43_CH5478	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CT43_CH5478	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CT43_CH5479	COG0628	permease
CT43_CH5483	COG3275	phosphorelay sensor kinase activity
CT43_CH5484	COG2814	Major facilitator Superfamily
CT43_CH5485	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CT43_CH5486	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CT43_CH5491	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CT43_CH5492	COG1272	protein, Hemolysin III
CT43_CH5497	COG1164	Oligoendopeptidase f
CT43_CH5499	COG5002	protein histidine kinase activity
CT43_CH5502	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CT43_CH5503	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CT43_CH5504	COG4853	Protein conserved in bacteria
CT43_CH5506	COG5002	protein histidine kinase activity
CT43_CH5507	COG0745	RESPONSE REGULATOR receiver
CT43_CH5509	COG0305	Participates in initiation and elongation during chromosome replication
CT43_CH5511	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CT43_CH5512	COG4241	membrane
CT43_CH5514	COG0629	single-stranded DNA binding
CT43_CH5516	COG0012	GTP binding
CT43_CH5517	COG4481	Protein conserved in bacteria
CT43_CH5518	COG0668	transmembrane transport
CT43_CH5520	COG1475	DNA binding
CT43_CH5521	COG1192	Involved in chromosome partitioning
CT43_CH5526	COG1847	R3H domain protein
CT43_CH5527	COG0706	membrane insertase activity
CT43_P127018	COG3344	reverse transcriptase
CT43_P127026	COG0776	regulation of translation
CT43_P127032	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
CT43_P127032	COG0778	Nitroreductase
CT43_P127034	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CT43_P127042	COG4974	Belongs to the 'phage' integrase family
CT43_P127056	COG0741	lytic transglycosylase activity
CT43_P127056	COG0791	NLP P60 protein
CT43_P127058	COG3344	reverse transcriptase
CT43_P127077	COG3344	reverse transcriptase
CT43_P127094	COG0739	heme binding
CT43_P127103	COG0457	Tetratricopeptide repeat
CT43_P281003	COG4824	toxin secretion phage lysis holin
CT43_P281012	COG0675	Transposase, IS605 OrfB family
CT43_P281017	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CT43_P281022	COG0697	spore germination
CT43_P281028	COG0457	Tetratricopeptide repeat
CT43_P281031	COG0653	protein targeting
CT43_P281043	COG4974	Belongs to the 'phage' integrase family
CT43_P281048	COG4166	transmembrane transport
CT43_P281049	COG2002	toxin-antitoxin pair type II binding
CT43_P281057	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CT43_P281062	COG0730	response to heat
CT43_P281071	COG0655	NAD(P)H dehydrogenase (quinone) activity
CT43_P281072	COG0583	DNA-binding transcription factor activity
CT43_P281077	COG0457	Tetratricopeptide repeat
CT43_P281082	COG2311	Membrane
CT43_P281094	COG3344	reverse transcriptase
CT43_P281096	COG3344	reverse transcriptase
CT43_P281100	COG3344	reverse transcriptase
CT43_P281148	COG3344	reverse transcriptase
CT43_P281155	COG4712	double-strand break repair protein
CT43_P281156	COG0592	DNA-directed DNA polymerase activity
CT43_P281215	COG0457	Tetratricopeptide repeat
CT43_P281220	COG4974	Belongs to the 'phage' integrase family
CT43_P281223	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CT43_P281224	COG2801	Transposase and inactivated derivatives
CT43_P281233	COG2828	Protein conserved in bacteria
CT43_P281236	COG0675	Transposase, IS605 OrfB family
CT43_P281245	COG0640	Transcriptional regulator
CT43_P281252	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CT43_P281253	COG0583	DNA-binding transcription factor activity
CT43_P281266	COG0840	transmembrane signaling receptor activity
CT43_P281267	COG0490	domain, Protein
CT43_P281268	COG0475	glutathione-regulated potassium exporter activity
CT43_P281269	COG3409	Peptidoglycan-binding domain 1 protein
CT43_P281269	COG5632	N-Acetylmuramoyl-L-alanine amidase
CT43_P281272	COG4974	Belongs to the 'phage' integrase family
CT43_P51001	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CT43_P51002	COG4653	Phage capsid family
CT43_P51024	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_P51029	COG0457	Tetratricopeptide repeat
CT43_P51067	COG3331	DNA recombination
CT43_P6006	COG0457	Tetratricopeptide repeat
CT43_P72011	COG3344	reverse transcriptase
CT43_P72018	COG0741	lytic transglycosylase activity
CT43_P72018	COG0791	NLP P60 protein
CT43_P72057	COG0457	Tetratricopeptide repeat
CT43_P72059	COG1923	regulation of RNA biosynthetic process
CT43_P83026	COG3547	Transposase (IS116 IS110 IS902 family)
CT43_P83040	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CT43_P83041	COG3209	COG3209 Rhs family protein
CT43_P83046	COG0582	viral genome integration into host DNA
CT43_P83052	COG2002	toxin-antitoxin pair type II binding
CT43_P83085	COG3344	reverse transcriptase
CT43_P851308	COG0457	Tetratricopeptide repeat