D3C60_00005 PF00308 Bacterial dnaA protein D3C60_00005 PF08299 Bacterial dnaA protein helix-turn-helix D3C60_00005 PF11638 DnaA N-terminal domain D3C60_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D3C60_00010 PF02767 DNA polymerase III beta subunit, central domain D3C60_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D3C60_00015 PF13275 S4 domain D3C60_00020 PF02463 RecF/RecN/SMC N terminal domain D3C60_00025 PF04025 D3C60_00025 D3C60_00030 PF00204 DNA gyrase B D3C60_00030 PF00986 DNA gyrase B subunit, carboxyl terminus D3C60_00030 PF01751 Toprim domain D3C60_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A D3C60_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller D3C60_00065 PF14175 D3C60_00065 D3C60_00070 PF00478 IMP dehydrogenase / GMP reductase domain D3C60_00070 PF00571 CBS domain D3C60_00075 PF00768 D-alanyl-D-alanine carboxypeptidase D3C60_00075 PF07943 Penicillin-binding protein 5, C-terminal domain D3C60_00080 PF01680 SOR/SNZ family D3C60_00085 PF01174 SNO glutamine amidotransferase family D3C60_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3C60_00090 PF02403 Seryl-tRNA synthetase N-terminal domain D3C60_00095 PF02595 Glycerate kinase family D3C60_00105 PF01712 Deoxynucleoside kinase D3C60_00110 PF01712 Deoxynucleoside kinase D3C60_00115 PF00704 Glycosyl hydrolases family 18 D3C60_00115 PF01476 LysM domain D3C60_00120 PF00857 Isochorismatase family D3C60_00125 PF14437 D3C60_00125 D3C60_00135 PF12169 DNA polymerase III subunits gamma and tau domain III D3C60_00135 PF13177 DNA polymerase III, delta subunit D3C60_00140 PF02575 YbaB/EbfC DNA-binding family D3C60_00145 PF02132 RecR protein D3C60_00145 PF13662 Toprim domain D3C60_00150 PF10704 D3C60_00150 D3C60_00155 PF07441 D3C60_00155 D3C60_00185 PF10764 D3C60_00185 D3C60_00190 PF10112 D3C60_00190 D3C60_00195 PF05816 D3C60_00195 D3C60_00200 PF01276 Orn/Lys/Arg decarboxylase, major domain D3C60_00200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D3C60_00205 PF02223 Thymidylate kinase D3C60_00210 PF06153 Protein of unknown function (DUF970) D3C60_00215 PF03885 Protein of unknown function (DUF327) D3C60_00220 PF09115 DNA polymerase III, delta subunit, C terminal D3C60_00220 PF13177 DNA polymerase III, delta subunit D3C60_00225 PF04468 D3C60_00225 D3C60_00230 PF06156 D3C60_00230 D3C60_00235 PF05175 Methyltransferase small domain D3C60_00240 PF01541 GIY-YIG catalytic domain D3C60_00245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3C60_00250 PF04014 Antidote-toxin recognition MazE D3C60_00255 PF01588 Putative tRNA binding domain D3C60_00255 PF08264 Anticodon-binding domain of tRNA D3C60_00255 PF09334 tRNA synthetases class I (M) D3C60_00260 PF01026 TatD related DNase D3C60_00265 PF03990 D3C60_00265 D3C60_00265 PF06725 3D domain D3C60_00265 PF07501 G5 domain D3C60_00270 PF13331 D3C60_00270 D3C60_00270 PF13662 Toprim domain D3C60_00275 PF00398 Ribosomal RNA adenine dimethylase D3C60_00280 PF05582 D3C60_00280 D3C60_00285 PF06257 Protein of unknown function (DUF1021) D3C60_00290 PF00269 Small, acid-soluble spore proteins, alpha/beta type D3C60_00295 PF00288 GHMP kinases N terminal domain D3C60_00295 PF08544 GHMP kinases C terminal D3C60_00300 PF00156 Phosphoribosyl transferase domain D3C60_00300 PF09182 Bacterial purine repressor, N-terminal D3C60_00305 PF01042 Endoribonuclease L-PSP D3C60_00310 PF04026 SpoVG D3C60_00315 PF00132 Bacterial transferase hexapeptide (six repeats) D3C60_00315 PF00483 Nucleotidyl transferase D3C60_00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D3C60_00320 PF14572 Phosphoribosyl synthetase-associated domain D3C60_00325 PF01386 Ribosomal L25p family D3C60_00325 PF14693 Ribosomal protein TL5, C-terminal domain D3C60_00330 PF01195 Peptidyl-tRNA hydrolase D3C60_00335 PF10955 D3C60_00335 D3C60_00340 PF00270 DEAD/DEAH box helicase D3C60_00340 PF00271 Helicase conserved C-terminal domain D3C60_00340 PF02559 CarD-like/TRCF domain D3C60_00340 PF03461 TRCF domain D3C60_00345 PF04014 Antidote-toxin recognition MazE D3C60_00345 PF15714 D3C60_00345 D3C60_00350 PF01943 D3C60_00350 D3C60_00350 PF14667 Polysaccharide biosynthesis C-terminal domain D3C60_00355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3C60_00355 PF03819 MazG nucleotide pyrophosphohydrolase domain D3C60_00360 PF01479 S4 domain D3C60_00365 PF07873 YabP family D3C60_00370 PF09578 D3C60_00370 D3C60_00375 PF04977 Septum formation initiator D3C60_00380 PF00575 S1 RNA binding domain D3C60_00395 PF07228 Stage II sporulation protein E (SpoIIE) D3C60_00400 PF00092 von Willebrand factor type A domain D3C60_00405 PF00069 Protein kinase domain D3C60_00410 PF01171 PP-loop family D3C60_00410 PF09179 TilS substrate binding domain D3C60_00410 PF11734 TilS substrate C-terminal domain D3C60_00415 PF00156 Phosphoribosyl transferase domain D3C60_00420 PF00004 ATPase family associated with various cellular activities (AAA) D3C60_00420 PF01434 Peptidase family M41 D3C60_00420 PF06480 FtsH Extracellular D3C60_00425 PF03309 Type III pantothenate kinase D3C60_00430 PF01430 Hsp33 protein D3C60_00435 PF13145 PPIC-type PPIASE domain D3C60_00435 PF13624 SurA N-terminal domain D3C60_00440 PF00291 Pyridoxal-phosphate dependent enzyme D3C60_00445 PF00425 chorismate binding enzyme D3C60_00445 PF04715 Anthranilate synthase component I, N terminal region D3C60_00450 PF00117 Glutamine amidotransferase class-I D3C60_00455 PF01063 Aminotransferase class IV D3C60_00460 PF00809 Pterin binding enzyme D3C60_00465 PF02152 Dihydroneopterin aldolase D3C60_00470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D3C60_00475 PF01381 Helix-turn-helix D3C60_00480 PF01207 Dihydrouridine synthase (Dus) D3C60_00485 PF00152 tRNA synthetases class II (D, K and N) D3C60_00485 PF01336 OB-fold nucleic acid binding domain D3C60_00565 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) D3C60_00570 PF02151 UvrB/uvrC motif D3C60_00575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain D3C60_00580 PF00004 ATPase family associated with various cellular activities (AAA) D3C60_00580 PF02151 UvrB/uvrC motif D3C60_00580 PF02861 Clp amino terminal domain D3C60_00580 PF07724 AAA domain (Cdc48 subfamily) D3C60_00580 PF10431 C-terminal, D2-small domain, of ClpB protein D3C60_00585 PF13481 AAA domain D3C60_00585 PF13541 Subunit ChlI of Mg-chelatase D3C60_00590 PF02457 DisA bacterial checkpoint controller nucleotide-binding D3C60_00590 PF10635 DisA bacterial checkpoint controller linker region D3C60_00600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D3C60_00605 PF02542 YgbB family D3C60_00610 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3C60_00615 PF00132 Bacterial transferase hexapeptide (six repeats) D3C60_00615 PF06426 Serine acetyltransferase, N-terminal D3C60_00620 PF01406 tRNA synthetases class I (C) catalytic domain D3C60_00620 PF09190 DALR domain D3C60_00625 PF00636 Ribonuclease III domain D3C60_00630 PF00588 SpoU rRNA Methylase family D3C60_00630 PF08032 RNA 2'-O ribose methyltransferase substrate binding D3C60_00635 PF05991 D3C60_00635 D3C60_00640 PF04542 Sigma-70 region 2 D3C60_00640 PF08281 Sigma-70, region 4 D3C60_00645 PF00471 Ribosomal protein L33 D3C60_00650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D3C60_00655 PF00467 KOW motif D3C60_00655 PF02357 Transcription termination factor nusG D3C60_00660 PF00298 Ribosomal protein L11, RNA binding domain D3C60_00660 PF03946 Ribosomal protein L11, N-terminal domain D3C60_00665 PF00687 Ribosomal protein L1p/L10e family D3C60_00670 PF00466 Ribosomal protein L10 D3C60_00675 PF00542 Ribosomal protein L7/L12 C-terminal domain D3C60_00675 PF16320 D3C60_00675 D3C60_00680 PF05175 Methyltransferase small domain D3C60_00685 PF00562 RNA polymerase Rpb2, domain 6 D3C60_00685 PF04560 RNA polymerase Rpb2, domain 7 D3C60_00685 PF04561 RNA polymerase Rpb2, domain 2 D3C60_00685 PF04563 RNA polymerase beta subunit D3C60_00685 PF04565 RNA polymerase Rpb2, domain 3 D3C60_00685 PF10385 RNA polymerase beta subunit external 1 domain D3C60_00690 PF00623 RNA polymerase Rpb1, domain 2 D3C60_00690 PF04983 RNA polymerase Rpb1, domain 3 D3C60_00690 PF04997 RNA polymerase Rpb1, domain 1 D3C60_00690 PF04998 RNA polymerase Rpb1, domain 5 D3C60_00690 PF05000 RNA polymerase Rpb1, domain 4 D3C60_00695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family D3C60_00700 PF00164 Ribosomal protein S12/S23 D3C60_00705 PF00177 Ribosomal protein S7p/S5e D3C60_00710 PF00009 Elongation factor Tu GTP binding domain D3C60_00710 PF00679 Elongation factor G C-terminus D3C60_00710 PF03144 Elongation factor Tu domain 2 D3C60_00710 PF03764 Elongation factor G, domain IV D3C60_00710 PF14492 Elongation Factor G, domain II D3C60_00715 PF00009 Elongation factor Tu GTP binding domain D3C60_00715 PF03143 Elongation factor Tu C-terminal domain D3C60_00715 PF03144 Elongation factor Tu domain 2 D3C60_00720 PF12146 Putative lysophospholipase D3C60_00725 PF00338 Ribosomal protein S10p/S20e D3C60_00730 PF00297 Ribosomal protein L3 D3C60_00735 PF00573 Ribosomal protein L4/L1 family D3C60_00740 PF00276 Ribosomal protein L23 D3C60_00745 PF00181 Ribosomal Proteins L2, RNA binding domain D3C60_00745 PF03947 Ribosomal Proteins L2, C-terminal domain D3C60_00750 PF00203 Ribosomal protein S19 D3C60_00755 PF00237 Ribosomal protein L22p/L17e D3C60_00760 PF00189 Ribosomal protein S3, C-terminal domain D3C60_00760 PF07650 KH domain D3C60_00765 PF00252 Ribosomal protein L16p/L10e D3C60_00770 PF00831 Ribosomal L29 protein D3C60_00775 PF00366 Ribosomal protein S17 D3C60_00780 PF00238 Ribosomal protein L14p/L23e D3C60_00785 PF00467 KOW motif D3C60_00785 PF17136 D3C60_00785 D3C60_00790 PF00281 Ribosomal protein L5 D3C60_00790 PF00673 ribosomal L5P family C-terminus D3C60_00795 PF00253 Ribosomal protein S14p/S29e D3C60_00800 PF00410 Ribosomal protein S8 D3C60_00805 PF00347 Ribosomal protein L6 D3C60_00810 PF00861 Ribosomal L18p/L5e family D3C60_00815 PF00333 Ribosomal protein S5, N-terminal domain D3C60_00815 PF03719 Ribosomal protein S5, C-terminal domain D3C60_00820 PF00327 Ribosomal protein L30p/L7e D3C60_00825 PF00828 Ribosomal protein L18e/L15 D3C60_00830 PF00344 SecY translocase D3C60_00835 PF00406 Adenylate kinase D3C60_00835 PF05191 Adenylate kinase, active site lid D3C60_00840 PF00557 Metallopeptidase family M24 D3C60_00850 PF01176 Translation initiation factor 1A / IF-1 D3C60_00855 PF00444 Ribosomal protein L36 D3C60_00860 PF00416 Ribosomal protein S13/S18 D3C60_00865 PF00411 Ribosomal protein S11 D3C60_00870 PF01000 RNA polymerase Rpb3/RpoA insert domain D3C60_00870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D3C60_00870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D3C60_00875 PF01196 Ribosomal protein L17 D3C60_00880 PF00005 ABC transporter D3C60_00885 PF00005 ABC transporter D3C60_00890 PF02361 Cobalt transport protein D3C60_00895 PF01416 tRNA pseudouridine synthase D3C60_00900 PF00572 Ribosomal protein L13 D3C60_00905 PF00380 Ribosomal protein S9/S16 D3C60_00910 PF08241 Methyltransferase domain D3C60_00915 PF05163 DinB family D3C60_00920 PF10730 D3C60_00920 D3C60_00925 PF01520 N-acetylmuramoyl-L-alanine amidase D3C60_00930 PF10609 ParA/MinD ATPase like D3C60_00940 PF14089 D3C60_00940 D3C60_00945 PF01522 Polysaccharide deacetylase D3C60_01005 PF07690 Major Facilitator Superfamily D3C60_01010 PF00202 Aminotransferase class-III D3C60_01015 PF00459 Inositol monophosphatase family D3C60_01020 PF00107 Zinc-binding dehydrogenase D3C60_01020 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_01025 PF00916 D3C60_01025 D3C60_01025 PF01740 STAS domain D3C60_01030 PF01758 Sodium Bile acid symporter family D3C60_01035 PF00756 Putative esterase D3C60_01040 PF01032 FecCD transport family D3C60_01045 PF01032 FecCD transport family D3C60_01050 PF01497 Periplasmic binding protein D3C60_01055 PF01497 Periplasmic binding protein D3C60_01055 PF12833 Helix-turn-helix domain D3C60_01060 PF07075 Protein of unknown function (DUF1343) D3C60_01065 PF00933 Glycosyl hydrolase family 3 N terminal domain D3C60_01065 PF01915 Glycosyl hydrolase family 3 C-terminal domain D3C60_01070 PF00144 Beta-lactamase D3C60_01075 PF00367 phosphotransferase system, EIIB D3C60_01075 PF02378 Phosphotransferase system, EIIC D3C60_01080 PF01380 SIS domain D3C60_01085 PF00583 Acetyltransferase (GNAT) family D3C60_01090 PF04463 D3C60_01090 D3C60_01120 PF04542 Sigma-70 region 2 D3C60_01120 PF08281 Sigma-70, region 4 D3C60_01125 PF13490 Putative zinc-finger D3C60_01130 PF02457 DisA bacterial checkpoint controller nucleotide-binding D3C60_01135 PF07949 YbbR-like protein D3C60_01140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3C60_01140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3C60_01140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3C60_01140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3C60_01145 PF01380 SIS domain D3C60_01145 PF13522 Glutamine amidotransferase domain D3C60_01150 PF00005 ABC transporter D3C60_01155 PF13346 D3C60_01155 D3C60_01160 PF00069 Protein kinase domain D3C60_01165 PF13649 Methyltransferase domain D3C60_01170 PF00248 Aldo/keto reductase family D3C60_01175 PF04172 D3C60_01175 D3C60_01180 PF03788 D3C60_01180 D3C60_01185 PF01047 MarR family D3C60_01190 PF00324 Amino acid permease D3C60_01195 PF13419 Haloacid dehalogenase-like hydrolase D3C60_01200 PF07730 Histidine kinase D3C60_01205 PF00072 Response regulator receiver domain D3C60_01205 PF00196 Bacterial regulatory proteins, luxR family D3C60_01210 PF00005 ABC transporter D3C60_01215 PF12698 ABC-2 family transporter protein D3C60_01220 PF12698 ABC-2 family transporter protein D3C60_01230 PF16219 D3C60_01230 D3C60_01235 PF17334 D3C60_01235 D3C60_01250 PF13520 Amino acid permease D3C60_01270 PF03009 Glycerophosphoryl diester phosphodiesterase family D3C60_01275 PF07690 Major Facilitator Superfamily D3C60_01285 PF10852 D3C60_01285 D3C60_01290 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal D3C60_01290 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal D3C60_01300 PF01471 Putative peptidoglycan binding domain D3C60_01300 PF08924 Domain of unknown function (DUF1906) D3C60_01310 PF01381 Helix-turn-helix D3C60_01315 PF00465 Iron-containing alcohol dehydrogenase D3C60_01320 PF02222 ATP-grasp domain D3C60_01325 PF01066 CDP-alcohol phosphatidyltransferase D3C60_01330 PF09335 D3C60_01330 D3C60_01335 PF02666 D3C60_01335 D3C60_01345 PF00581 Rhodanese-like domain D3C60_01345 PF12368 D3C60_01345 D3C60_01350 PF00375 Sodium:dicarboxylate symporter family D3C60_01355 PF01063 Aminotransferase class IV D3C60_01360 PF00324 Amino acid permease D3C60_01365 PF02574 Homocysteine S-methyltransferase D3C60_01370 PF01235 D3C60_01370 D3C60_01375 PF04960 Glutaminase D3C60_01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_01385 PF00072 Response regulator receiver domain D3C60_01385 PF08664 D3C60_01385 D3C60_01390 PF15777 D3C60_01390 D3C60_01400 PF01545 Cation efflux family D3C60_01400 PF16916 D3C60_01400 D3C60_01405 PF00881 Nitroreductase family D3C60_01410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_01415 PF07681 D3C60_01415 D3C60_01420 PF00085 Thioredoxin D3C60_01425 PF10710 D3C60_01425 D3C60_01435 PF07486 Cell Wall Hydrolase D3C60_01445 PF09423 PhoD-like phosphatase D3C60_01445 PF16655 D3C60_01445 D3C60_01450 PF02416 mttA/Hcf106 family D3C60_01455 PF00902 Sec-independent protein translocase protein (TatC) D3C60_01460 PF01470 Pyroglutamyl peptidase D3C60_01465 PF00266 Aminotransferase class-V D3C60_01470 PF07690 Major Facilitator Superfamily D3C60_01475 PF00440 Bacterial regulatory proteins, tetR family D3C60_01480 PF00710 Asparaginase D3C60_01485 PF01674 Lipase (class 2) D3C60_01490 PF02810 SEC-C motif D3C60_01490 PF05225 helix-turn-helix, Psq domain D3C60_01495 PF00248 Aldo/keto reductase family D3C60_01500 PF11611 Domain of unknown function (DUF4352) D3C60_01500 PF17118 D3C60_01500 D3C60_01505 PF16244 D3C60_01505 D3C60_01510 PF16244 D3C60_01510 D3C60_01515 PF13539 D-alanyl-D-alanine carboxypeptidase D3C60_01520 PF13424 Tetratricopeptide repeat D3C60_01525 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_01530 PF00128 Alpha amylase, catalytic domain D3C60_01535 PF01297 Periplasmic solute binding protein family D3C60_01540 PF00005 ABC transporter D3C60_01545 PF00950 D3C60_01545 D3C60_01550 PF00296 Luciferase-like monooxygenase D3C60_01555 PF02342 TerD domain D3C60_01560 PF02342 TerD domain D3C60_01565 PF02342 TerD domain D3C60_01570 PF03741 D3C60_01570 D3C60_01575 PF14266 D3C60_01575 D3C60_01580 PF05816 D3C60_01580 D3C60_01585 PF07690 Major Facilitator Superfamily D3C60_01590 PF00005 ABC transporter D3C60_01590 PF00571 CBS domain D3C60_01595 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_01600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3C60_01605 PF01546 Peptidase family M20/M25/M40 D3C60_01605 PF07687 Peptidase dimerisation domain D3C60_01610 PF03606 D3C60_01610 D3C60_01620 PF00128 Alpha amylase, catalytic domain D3C60_01620 PF16738 D3C60_01620 D3C60_01625 PF00056 lactate/malate dehydrogenase, NAD binding domain D3C60_01625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D3C60_01630 PF07690 Major Facilitator Superfamily D3C60_01635 PF01047 MarR family D3C60_01640 PF01810 D3C60_01640 D3C60_01645 PF08892 D3C60_01645 D3C60_01650 PF00324 Amino acid permease D3C60_01655 PF09347 Domain of unknown function (DUF1989) D3C60_01660 PF02540 NAD synthase D3C60_01665 PF12197 Bacillus cereus group antimicrobial protein D3C60_01670 PF01261 Xylose isomerase-like TIM barrel D3C60_01675 PF07690 Major Facilitator Superfamily D3C60_01680 PF01202 Shikimate kinase D3C60_01685 PF05448 Acetyl xylan esterase (AXE1) D3C60_01690 PF10127 D3C60_01690 D3C60_01695 PF01619 Proline dehydrogenase D3C60_01700 PF00171 Aldehyde dehydrogenase family D3C60_01705 PF00474 Sodium:solute symporter family D3C60_01710 PF13556 PucR C-terminal helix-turn-helix domain D3C60_01715 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_01720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3C60_01725 PF00355 Rieske [2Fe-2S] domain D3C60_01730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3C60_01730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3C60_01730 PF04324 BFD-like [2Fe-2S] binding domain D3C60_01730 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_01735 PF00384 Molybdopterin oxidoreductase D3C60_01735 PF01568 Molydopterin dinucleotide binding domain D3C60_01735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3C60_01740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3C60_01740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3C60_01740 PF04324 BFD-like [2Fe-2S] binding domain D3C60_01740 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_01745 PF07690 Major Facilitator Superfamily D3C60_01750 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3C60_01750 PF07683 Cobalamin synthesis protein cobW C-terminal domain D3C60_01755 PF00107 Zinc-binding dehydrogenase D3C60_01755 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_01755 PF13823 Alcohol dehydrogenase GroES-associated D3C60_01760 PF06271 D3C60_01760 D3C60_01765 PF10925 D3C60_01765 D3C60_01770 PF00232 Glycosyl hydrolase family 1 D3C60_01775 PF11033 Competence protein J (ComJ) D3C60_01780 PF14040 D3C60_01780 D3C60_01785 PF01380 SIS domain D3C60_01790 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D3C60_01795 PF01638 HxlR-like helix-turn-helix D3C60_01805 PF00501 AMP-binding enzyme D3C60_01805 PF00550 Phosphopantetheine attachment site D3C60_01805 PF00668 Condensation domain D3C60_01805 PF13193 AMP-binding enzyme C-terminal domain D3C60_01810 PF00501 AMP-binding enzyme D3C60_01810 PF00550 Phosphopantetheine attachment site D3C60_01810 PF00668 Condensation domain D3C60_01810 PF13193 AMP-binding enzyme C-terminal domain D3C60_01815 PF00501 AMP-binding enzyme D3C60_01815 PF00550 Phosphopantetheine attachment site D3C60_01815 PF00668 Condensation domain D3C60_01815 PF00975 Thioesterase domain D3C60_01815 PF13193 AMP-binding enzyme C-terminal domain D3C60_01820 PF00975 Thioesterase domain D3C60_01825 PF00155 Aminotransferase class I and II D3C60_01830 PF14317 D3C60_01830 D3C60_01835 PF00892 EamA-like transporter family D3C60_01840 PF00155 Aminotransferase class I and II D3C60_01840 PF00392 Bacterial regulatory proteins, gntR family D3C60_01845 PF01648 4'-phosphopantetheinyl transferase superfamily D3C60_01855 PF00005 ABC transporter D3C60_01860 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_01865 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3C60_01870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_01870 PF03466 LysR substrate binding domain D3C60_01875 PF02441 Flavoprotein D3C60_01880 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D3C60_01895 PF00854 POT family D3C60_01900 PF13229 Right handed beta helix region D3C60_01910 PF03323 D3C60_01910 D3C60_01915 PF05504 Spore germination B3/ GerAC like, C-terminal D3C60_01920 PF03845 D3C60_01920 D3C60_01925 PF00296 Luciferase-like monooxygenase D3C60_01930 PF00583 Acetyltransferase (GNAT) family D3C60_01935 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3C60_01940 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_01945 PF00005 ABC transporter D3C60_01950 PF01546 Peptidase family M20/M25/M40 D3C60_01950 PF07687 Peptidase dimerisation domain D3C60_01955 PF03972 MmgE/PrpD family D3C60_01960 PF00005 ABC transporter D3C60_01965 PF02687 D3C60_01965 D3C60_01965 PF12704 MacB-like periplasmic core domain D3C60_01970 PF00072 Response regulator receiver domain D3C60_01970 PF00486 Transcriptional regulatory protein, C terminal D3C60_01975 PF00512 His Kinase A (phospho-acceptor) domain D3C60_01975 PF00672 HAMP domain D3C60_01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_01980 PF13424 Tetratricopeptide repeat D3C60_01985 PF11131 D3C60_01985 D3C60_01990 PF09680 D3C60_01990 D3C60_01995 PF00696 Amino acid kinase family D3C60_01995 PF13840 ACT domain D3C60_02000 PF01032 FecCD transport family D3C60_02005 PF01032 FecCD transport family D3C60_02010 PF00005 ABC transporter D3C60_02015 PF01497 Periplasmic binding protein D3C60_02020 PF07690 Major Facilitator Superfamily D3C60_02025 PF00440 Bacterial regulatory proteins, tetR family D3C60_02030 PF00881 Nitroreductase family D3C60_02035 PF03992 Antibiotic biosynthesis monooxygenase D3C60_02040 PF01022 Bacterial regulatory protein, arsR family D3C60_02045 PF00155 Aminotransferase class I and II D3C60_02045 PF00392 Bacterial regulatory proteins, gntR family D3C60_02050 PF00202 Aminotransferase class-III D3C60_02055 PF00171 Aldehyde dehydrogenase family D3C60_02060 PF06800 D3C60_02060 D3C60_02065 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_02070 PF07987 Domain of unkown function (DUF1775) D3C60_02075 PF04234 CopC domain D3C60_02075 PF05425 D3C60_02075 D3C60_02075 PF13115 D3C60_02075 D3C60_02080 PF08220 DeoR-like helix-turn-helix domain D3C60_02090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3C60_02090 PF02378 Phosphotransferase system, EIIC D3C60_02095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3C60_02100 PF01232 Mannitol dehydrogenase Rossmann domain D3C60_02100 PF08125 Mannitol dehydrogenase C-terminal domain D3C60_02105 PF07977 FabA-like domain D3C60_02115 PF08282 haloacid dehalogenase-like hydrolase D3C60_02120 PF03746 LamB/YcsF family D3C60_02125 PF01566 D3C60_02125 D3C60_02130 PF07286 Protein of unknown function (DUF1445) D3C60_02135 PF02682 Allophanate hydrolase subunit 1 D3C60_02140 PF02626 Allophanate hydrolase subunit 2 D3C60_02145 PF01614 Bacterial transcriptional regulator D3C60_02145 PF09339 IclR helix-turn-helix domain D3C60_02150 PF13472 GDSL-like Lipase/Acylhydrolase family D3C60_02155 PF13129 D3C60_02155 D3C60_02160 PF03992 Antibiotic biosynthesis monooxygenase D3C60_02165 PF00905 Penicillin binding protein transpeptidase domain D3C60_02165 PF03717 Penicillin-binding Protein dimerisation domain D3C60_02165 PF05223 NTF2-like N-terminal transpeptidase domain D3C60_02170 PF00248 Aldo/keto reductase family D3C60_02175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3C60_02175 PF00874 PRD domain D3C60_02175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3C60_02175 PF05043 Mga helix-turn-helix domain D3C60_02175 PF08279 HTH domain D3C60_02180 PF00501 AMP-binding enzyme D3C60_02180 PF13193 AMP-binding enzyme C-terminal domain D3C60_02185 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_02190 PF07385 Protein of unknown function (DUF1498) D3C60_02195 PF13302 Acetyltransferase (GNAT) domain D3C60_02200 PF16242 D3C60_02200 D3C60_02205 PF10997 D3C60_02205 D3C60_02215 PF12823 D3C60_02215 D3C60_02220 PF01037 AsnC family D3C60_02220 PF13404 AsnC-type helix-turn-helix domain D3C60_02225 PF01131 DNA topoisomerase D3C60_02225 PF01751 Toprim domain D3C60_02235 PF00990 GGDEF domain D3C60_02240 PF10096 D3C60_02240 D3C60_02245 PF13641 Glycosyltransferase like family 2 D3C60_02250 PF03170 Bacterial cellulose synthase subunit D3C60_02255 PF13520 Amino acid permease D3C60_02260 PF00293 NUDIX domain D3C60_02265 PF00205 Thiamine pyrophosphate enzyme, central domain D3C60_02265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3C60_02265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3C60_02270 PF00583 Acetyltransferase (GNAT) family D3C60_02285 PF10844 D3C60_02285 D3C60_02290 PF01177 Asp/Glu/Hydantoin racemase D3C60_02325 PF01566 D3C60_02325 D3C60_02345 PF17314 D3C60_02345 D3C60_02350 PF00893 Small Multidrug Resistance protein D3C60_02355 PF12787 D3C60_02355 D3C60_02360 PF10685 D3C60_02360 D3C60_02365 PF07883 Cupin domain D3C60_02370 PF16291 D3C60_02370 D3C60_02375 PF05067 Manganese containing catalase D3C60_02380 PF03480 Bacterial extracellular solute-binding protein, family 7 D3C60_02385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_02385 PF13596 PAS domain D3C60_02385 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D3C60_02385 PF17203 D3C60_02385 D3C60_02390 PF00072 Response regulator receiver domain D3C60_02390 PF04703 FaeA-like protein D3C60_02395 PF00375 Sodium:dicarboxylate symporter family D3C60_02400 PF01594 D3C60_02400 D3C60_02405 PF00005 ABC transporter D3C60_02410 PF12730 D3C60_02410 D3C60_02420 PF02770 Acyl-CoA dehydrogenase, middle domain D3C60_02420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3C60_02420 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D3C60_02425 PF13040 D3C60_02425 D3C60_02430 PF13076 D3C60_02430 D3C60_02435 PF01545 Cation efflux family D3C60_02435 PF16916 D3C60_02435 D3C60_02440 PF00085 Thioredoxin D3C60_02445 PF01820 D-ala D-ala ligase N-terminus D3C60_02445 PF07478 D-ala D-ala ligase C-terminus D3C60_02450 PF01225 Mur ligase family, catalytic domain D3C60_02450 PF02875 Mur ligase family, glutamate ligase domain D3C60_02450 PF08245 Mur ligase middle domain D3C60_02455 PF00270 DEAD/DEAH box helicase D3C60_02455 PF00271 Helicase conserved C-terminal domain D3C60_02460 PF03703 D3C60_02460 D3C60_02465 PF03703 D3C60_02465 D3C60_02470 PF01694 Rhomboid family D3C60_02475 PF01648 4'-phosphopantetheinyl transferase superfamily D3C60_02485 PF00842 Alanine racemase, C-terminal domain D3C60_02485 PF01168 Alanine racemase, N-terminal domain D3C60_02490 PF01402 Ribbon-helix-helix protein, copG family D3C60_02495 PF02452 PemK-like protein D3C60_02500 PF01740 STAS domain D3C60_02500 PF08678 Rsbr N terminal D3C60_02505 PF01740 STAS domain D3C60_02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_02515 PF07228 Stage II sporulation protein E (SpoIIE) D3C60_02515 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain D3C60_02520 PF01740 STAS domain D3C60_02525 PF13581 Histidine kinase-like ATPase domain D3C60_02530 PF04539 Sigma-70 region 3 D3C60_02530 PF04542 Sigma-70 region 2 D3C60_02530 PF04545 Sigma-70, region 4 D3C60_02535 PF07228 Stage II sporulation protein E (SpoIIE) D3C60_02540 PF00575 S1 RNA binding domain D3C60_02540 PF09371 Tex-like protein N-terminal domain D3C60_02540 PF12836 Helix-hairpin-helix motif D3C60_02540 PF16921 D3C60_02540 D3C60_02550 PF10263 D3C60_02550 D3C60_02600 PF07681 D3C60_02600 D3C60_02605 PF02082 Transcriptional regulator D3C60_02610 PF02525 Flavodoxin-like fold D3C60_02615 PF01370 NAD dependent epimerase/dehydratase family D3C60_02625 PF02525 Flavodoxin-like fold D3C60_02640 PF07690 Major Facilitator Superfamily D3C60_02645 PF01047 MarR family D3C60_02655 PF01575 MaoC like domain D3C60_02660 PF04237 YjbR D3C60_02670 PF02082 Transcriptional regulator D3C60_02675 PF13460 NADH(P)-binding D3C60_02680 PF00440 Bacterial regulatory proteins, tetR family D3C60_02680 PF16925 D3C60_02680 D3C60_02685 PF00106 short chain dehydrogenase D3C60_02690 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_02690 PF13602 Zinc-binding dehydrogenase D3C60_02695 PF00487 D3C60_02695 D3C60_02700 PF02613 Nitrate reductase delta subunit D3C60_02705 PF00313 'Cold-shock' DNA-binding domain D3C60_02710 PF02559 CarD-like/TRCF domain D3C60_02720 PF11193 D3C60_02720 D3C60_02725 PF03551 Transcriptional regulator PadR-like family D3C60_02730 PF00583 Acetyltransferase (GNAT) family D3C60_02730 PF01047 MarR family D3C60_02735 PF07690 Major Facilitator Superfamily D3C60_02740 PF01734 Patatin-like phospholipase D3C60_02745 PF12867 DinB superfamily D3C60_02750 PF07883 Cupin domain D3C60_02765 PF01565 FAD binding domain D3C60_02765 PF08031 Berberine and berberine like D3C60_02775 PF01545 Cation efflux family D3C60_02775 PF16916 D3C60_02775 D3C60_02780 PF13738 Pyridine nucleotide-disulphide oxidoreductase D3C60_02790 PF00701 Dihydrodipicolinate synthetase family D3C60_02800 PF04055 Radical SAM superfamily D3C60_02815 PF00303 Thymidylate synthase D3C60_02820 PF13649 Methyltransferase domain D3C60_02825 PF08543 Phosphomethylpyrimidine kinase D3C60_02830 PF00293 NUDIX domain D3C60_02830 PF13242 HAD-hyrolase-like D3C60_02830 PF13344 Haloacid dehalogenase-like hydrolase D3C60_02835 PF01758 Sodium Bile acid symporter family D3C60_02840 PF00107 Zinc-binding dehydrogenase D3C60_02840 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_02845 PF13411 MerR HTH family regulatory protein D3C60_02850 PF03553 D3C60_02850 D3C60_02855 PF00155 Aminotransferase class I and II D3C60_02855 PF00392 Bacterial regulatory proteins, gntR family D3C60_02860 PF04299 Putative FMN-binding domain D3C60_02870 PF07690 Major Facilitator Superfamily D3C60_02875 PF00440 Bacterial regulatory proteins, tetR family D3C60_02875 PF16859 D3C60_02875 D3C60_02880 PF00892 EamA-like transporter family D3C60_02885 PF00155 Aminotransferase class I and II D3C60_02885 PF00392 Bacterial regulatory proteins, gntR family D3C60_02890 PF07875 D3C60_02890 D3C60_02900 PF00107 Zinc-binding dehydrogenase D3C60_02900 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_02900 PF13823 Alcohol dehydrogenase GroES-associated D3C60_02905 PF07875 D3C60_02905 D3C60_02915 PF07722 Peptidase C26 D3C60_02920 PF00005 ABC transporter D3C60_02920 PF12848 ABC transporter D3C60_02925 PF13302 Acetyltransferase (GNAT) domain D3C60_02930 PF02588 D3C60_02930 D3C60_02930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D3C60_02935 PF00465 Iron-containing alcohol dehydrogenase D3C60_02940 PF07690 Major Facilitator Superfamily D3C60_02945 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_02945 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_02950 PF13560 Helix-turn-helix domain D3C60_02955 PF01925 D3C60_02955 D3C60_02960 PF00583 Acetyltransferase (GNAT) family D3C60_02965 PF13411 MerR HTH family regulatory protein D3C60_02970 PF00892 EamA-like transporter family D3C60_02975 PF00293 NUDIX domain D3C60_02975 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal D3C60_02980 PF08241 Methyltransferase domain D3C60_02985 PF00180 Isocitrate/isopropylmalate dehydrogenase D3C60_02990 PF00392 Bacterial regulatory proteins, gntR family D3C60_02990 PF07729 FCD domain D3C60_02995 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase D3C60_03010 PF00144 Beta-lactamase D3C60_03015 PF07563 Protein of unknown function (DUF1541) D3C60_03020 PF07690 Major Facilitator Superfamily D3C60_03025 PF00392 Bacterial regulatory proteins, gntR family D3C60_03025 PF07702 UTRA domain D3C60_03030 PF00392 Bacterial regulatory proteins, gntR family D3C60_03030 PF07729 FCD domain D3C60_03035 PF07690 Major Facilitator Superfamily D3C60_03040 PF00893 Small Multidrug Resistance protein D3C60_03045 PF00893 Small Multidrug Resistance protein D3C60_03050 PF00440 Bacterial regulatory proteins, tetR family D3C60_03055 PF13520 Amino acid permease D3C60_03060 PF05067 Manganese containing catalase D3C60_03065 PF08327 Activator of Hsp90 ATPase homolog 1-like protein D3C60_03070 PF00107 Zinc-binding dehydrogenase D3C60_03070 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_03075 PF00083 Sugar (and other) transporter D3C60_03115 PF00586 AIR synthase related protein, N-terminal domain D3C60_03115 PF02769 AIR synthase related protein, C-terminal domain D3C60_03120 PF02367 Uncharacterised P-loop hydrolase UPF0079 D3C60_03125 PF00814 Glycoprotease family D3C60_03130 PF00583 Acetyltransferase (GNAT) family D3C60_03135 PF00814 Glycoprotease family D3C60_03140 PF00005 ABC transporter D3C60_03140 PF12848 ABC transporter D3C60_03140 PF16326 D3C60_03140 D3C60_03145 PF01967 MoaC family D3C60_03150 PF02629 CoA binding domain D3C60_03150 PF06971 Putative DNA-binding protein N-terminus D3C60_03155 PF02416 mttA/Hcf106 family D3C60_03160 PF00902 Sec-independent protein translocase protein (TatC) D3C60_03165 PF14146 D3C60_03165 D3C60_03170 PF02517 CAAX protease self-immunity D3C60_03175 PF00166 Chaperonin 10 Kd subunit D3C60_03180 PF00118 TCP-1/cpn60 chaperonin family D3C60_03185 PF09195 Restriction endonuclease BglII D3C60_03195 PF00176 SNF2 family N-terminal domain D3C60_03195 PF00271 Helicase conserved C-terminal domain D3C60_03200 PF13020 D3C60_03200 D3C60_03205 PF01555 DNA methylase D3C60_03210 PF00931 NB-ARC domain D3C60_03210 PF13181 Tetratricopeptide repeat D3C60_03215 PF00107 Zinc-binding dehydrogenase D3C60_03215 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_03220 PF13347 MFS/sugar transport protein D3C60_03225 PF00294 pfkB family carbohydrate kinase D3C60_03230 PF14154 D3C60_03230 D3C60_03235 PF04012 D3C60_03235 D3C60_03240 PF08271 TFIIB zinc-binding D3C60_03245 PF04536 TLP18 D3C60_03250 PF13248 D3C60_03250 D3C60_03250 PF13421 D3C60_03250 D3C60_03255 PF01757 D3C60_03255 D3C60_03260 PF11738 Protein of unknown function (DUF3298) D3C60_03260 PF13739 Domain of unknown function (DUF4163) D3C60_03265 PF04542 Sigma-70 region 2 D3C60_03265 PF08281 Sigma-70, region 4 D3C60_03270 PF00107 Zinc-binding dehydrogenase D3C60_03270 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_03275 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel D3C60_03280 PF07676 WD40-like Beta Propeller Repeat D3C60_03285 PF14169 D3C60_03285 D3C60_03290 PF00394 Multicopper oxidase D3C60_03290 PF07731 Multicopper oxidase D3C60_03290 PF07732 Multicopper oxidase D3C60_03295 PF00324 Amino acid permease D3C60_03300 PF01545 Cation efflux family D3C60_03300 PF16916 D3C60_03300 D3C60_03305 PF07726 ATPase family associated with various cellular activities (AAA) D3C60_03310 PF01882 D3C60_03310 D3C60_03315 PF01841 Transglutaminase-like superfamily D3C60_03315 PF13559 D3C60_03315 D3C60_03320 PF00117 Glutamine amidotransferase class-I D3C60_03320 PF00958 GMP synthase C terminal domain D3C60_03320 PF02540 NAD synthase D3C60_03325 PF13673 Acetyltransferase (GNAT) domain D3C60_03330 PF04542 Sigma-70 region 2 D3C60_03330 PF08281 Sigma-70, region 4 D3C60_03335 PF13786 Domain of unknown function (DUF4179) D3C60_03340 PF00860 Permease family D3C60_03350 PF13076 D3C60_03350 D3C60_03355 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D3C60_03360 PF14044 D3C60_03360 D3C60_03365 PF00731 AIR carboxylase D3C60_03370 PF02222 ATP-grasp domain D3C60_03370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3C60_03375 PF00206 Lyase D3C60_03375 PF10397 Adenylosuccinate lyase C-terminus D3C60_03380 PF01259 SAICAR synthetase D3C60_03385 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase D3C60_03390 PF13507 CobB/CobQ-like glutamine amidotransferase domain D3C60_03395 PF00586 AIR synthase related protein, N-terminal domain D3C60_03395 PF02769 AIR synthase related protein, C-terminal domain D3C60_03400 PF00156 Phosphoribosyl transferase domain D3C60_03400 PF13522 Glutamine amidotransferase domain D3C60_03405 PF00586 AIR synthase related protein, N-terminal domain D3C60_03405 PF02769 AIR synthase related protein, C-terminal domain D3C60_03410 PF00551 Formyl transferase D3C60_03415 PF01808 AICARFT/IMPCHase bienzyme D3C60_03415 PF02142 MGS-like domain D3C60_03420 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D3C60_03420 PF02843 Phosphoribosylglycinamide synthetase, C domain D3C60_03420 PF02844 Phosphoribosylglycinamide synthetase, N domain D3C60_03425 PF11127 Protein of unknown function (DUF2892) D3C60_03430 PF01979 Amidohydrolase family D3C60_03430 PF13382 Adenine deaminase C-terminal domain D3C60_03435 PF11258 Protein of unknown function (DUF3048) D3C60_03435 PF17479 D3C60_03435 D3C60_03440 PF01371 Trp repressor protein D3C60_03445 PF01645 Conserved region in glutamate synthase D3C60_03455 PF01884 PcrB family D3C60_03460 PF00580 UvrD/REP helicase N-terminal domain D3C60_03460 PF13361 UvrD-like helicase C-terminal domain D3C60_03465 PF00533 BRCA1 C Terminus (BRCT) domain D3C60_03465 PF01653 NAD-dependent DNA ligase adenylation domain D3C60_03465 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D3C60_03465 PF03120 NAD-dependent DNA ligase OB-fold domain D3C60_03465 PF12826 Helix-hairpin-helix motif D3C60_03465 PF14520 Helix-hairpin-helix domain D3C60_03470 PF07537 CamS sex pheromone cAM373 precursor D3C60_03475 PF01636 Phosphotransferase enzyme family D3C60_03480 PF02308 D3C60_03480 D3C60_03485 PF00474 Sodium:solute symporter family D3C60_03490 PF02686 Glu-tRNAGln amidotransferase C subunit D3C60_03495 PF01425 Amidase D3C60_03500 PF02637 GatB domain D3C60_03500 PF02934 GatB/GatE catalytic domain D3C60_03505 PF00440 Bacterial regulatory proteins, tetR family D3C60_03510 PF00873 AcrB/AcrD/AcrF family D3C60_03515 PF00781 Diacylglycerol kinase catalytic domain D3C60_03520 PF01938 TRAM domain D3C60_03520 PF05958 tRNA (Uracil-5-)-methyltransferase D3C60_03525 PF13175 AAA ATPase domain D3C60_03530 PF13245 Part of AAA domain D3C60_03550 PF01320 Colicin immunity protein / pyocin immunity protein D3C60_03555 PF04634 Protein of unknown function, DUF600 D3C60_03560 PF04740 D3C60_03560 D3C60_03560 PF13930 DNA/RNA non-specific endonuclease D3C60_03565 PF01709 Transcriptional regulator D3C60_03575 PF04439 Streptomycin adenylyltransferase D3C60_03580 PF11007 D3C60_03580 D3C60_03585 PF12652 D3C60_03585 D3C60_03590 PF05067 Manganese containing catalase D3C60_03595 PF00583 Acetyltransferase (GNAT) family D3C60_03600 PF14150 D3C60_03600 D3C60_03605 PF04239 Protein of unknown function (DUF421) D3C60_03610 PF03992 Antibiotic biosynthesis monooxygenase D3C60_03615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_03625 PF01740 STAS domain D3C60_03630 PF10055 D3C60_03630 D3C60_03640 PF01027 Inhibitor of apoptosis-promoting Bax1 D3C60_03645 PF01047 MarR family D3C60_03650 PF01494 FAD binding domain D3C60_03655 PF13037 D3C60_03655 D3C60_03655 PF13039 D3C60_03655 D3C60_03660 PF00067 Cytochrome P450 D3C60_03660 PF00175 Oxidoreductase NAD-binding domain D3C60_03660 PF00258 Flavodoxin D3C60_03660 PF00667 FAD binding domain D3C60_03665 PF00884 Sulfatase D3C60_03670 PF00483 Nucleotidyl transferase D3C60_03675 PF16363 D3C60_03675 D3C60_03680 PF03407 D3C60_03680 D3C60_03685 PF00535 Glycosyl transferase family 2 D3C60_03690 PF03407 D3C60_03690 D3C60_03695 PF07690 Major Facilitator Superfamily D3C60_03700 PF13520 Amino acid permease D3C60_03705 PF00171 Aldehyde dehydrogenase family D3C60_03710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3C60_03715 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_03720 PF00535 Glycosyl transferase family 2 D3C60_03725 PF00005 ABC transporter D3C60_03725 PF12848 ABC transporter D3C60_03725 PF16326 D3C60_03725 D3C60_03730 PF13411 MerR HTH family regulatory protein D3C60_03735 PF07690 Major Facilitator Superfamily D3C60_03740 PF00005 ABC transporter D3C60_03740 PF12848 ABC transporter D3C60_03745 PF00270 DEAD/DEAH box helicase D3C60_03745 PF00271 Helicase conserved C-terminal domain D3C60_03750 PF00583 Acetyltransferase (GNAT) family D3C60_03755 PF00107 Zinc-binding dehydrogenase D3C60_03755 PF16884 D3C60_03755 D3C60_03760 PF11486 Protein of unknown function (DUF3212) D3C60_03765 PF11181 D3C60_03765 D3C60_03770 PF00544 Pectate lyase D3C60_03775 PF00939 Sodium:sulfate symporter transmembrane region D3C60_03785 PF01391 Collagen triple helix repeat (20 copies) D3C60_03790 PF01391 Collagen triple helix repeat (20 copies) D3C60_03795 PF01391 Collagen triple helix repeat (20 copies) D3C60_03800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_03800 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D3C60_03800 PF17203 D3C60_03800 D3C60_03805 PF00072 Response regulator receiver domain D3C60_03805 PF08279 HTH domain D3C60_03810 PF03401 Tripartite tricarboxylate transporter family receptor D3C60_03815 PF03600 Citrate transporter D3C60_03820 PF00753 Metallo-beta-lactamase superfamily D3C60_03825 PF02898 Nitric oxide synthase, oxygenase domain D3C60_03830 PF00708 Acylphosphatase D3C60_03835 PF03473 MOSC domain D3C60_03835 PF03475 3-alpha domain D3C60_03840 PF11121 D3C60_03840 D3C60_03850 PF11588 Protein of unknown function (DUF3243) D3C60_03855 PF00557 Metallopeptidase family M24 D3C60_03860 PF00367 phosphotransferase system, EIIB D3C60_03860 PF02378 Phosphotransferase system, EIIC D3C60_03865 PF10787 D3C60_03865 D3C60_03870 PF00884 Sulfatase D3C60_03875 PF09350 D3C60_03875 D3C60_03880 PF00011 Hsp20/alpha crystallin family D3C60_03885 PF10676 D3C60_03885 D3C60_03890 PF10676 D3C60_03890 D3C60_03895 PF00367 phosphotransferase system, EIIB D3C60_03895 PF02378 Phosphotransferase system, EIIC D3C60_03900 PF00128 Alpha amylase, catalytic domain D3C60_03900 PF16657 D3C60_03900 D3C60_03905 PF00392 Bacterial regulatory proteins, gntR family D3C60_03905 PF07702 UTRA domain D3C60_03910 PF00881 Nitroreductase family D3C60_03915 PF07907 D3C60_03915 D3C60_03920 PF07907 D3C60_03920 D3C60_03925 PF00149 Calcineurin-like phosphoesterase D3C60_03925 PF02872 5'-nucleotidase, C-terminal domain D3C60_03930 PF01965 DJ-1/PfpI family D3C60_03935 PF00356 Bacterial regulatory proteins, lacI family D3C60_03935 PF13377 Periplasmic binding protein-like domain D3C60_03940 PF08501 Shikimate dehydrogenase substrate binding domain D3C60_03945 PF01487 Type I 3-dehydroquinase D3C60_03950 PF07690 Major Facilitator Superfamily D3C60_03955 PF06569 D3C60_03955 D3C60_03960 PF01451 Low molecular weight phosphotyrosine protein phosphatase D3C60_03970 PF03631 D3C60_03970 D3C60_03975 PF07690 Major Facilitator Superfamily D3C60_03980 PF01699 Sodium/calcium exchanger protein D3C60_03985 PF14167 D3C60_03985 D3C60_03990 PF00924 Mechanosensitive ion channel D3C60_03995 PF04055 Radical SAM superfamily D3C60_03995 PF08756 D3C60_03995 D3C60_03995 PF13353 4Fe-4S single cluster domain D3C60_04005 PF01522 Polysaccharide deacetylase D3C60_04010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3C60_04010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3C60_04020 PF01544 CorA-like Mg2+ transporter protein D3C60_04025 PF00730 HhH-GPD superfamily base excision DNA repair protein D3C60_04030 PF01938 TRAM domain D3C60_04030 PF05958 tRNA (Uracil-5-)-methyltransferase D3C60_04035 PF14118 D3C60_04035 D3C60_04040 PF01207 Dihydrouridine synthase (Dus) D3C60_04055 PF00676 Dehydrogenase E1 component D3C60_04060 PF02779 Transketolase, pyrimidine binding domain D3C60_04060 PF02780 Transketolase, C-terminal domain D3C60_04065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3C60_04065 PF00364 Biotin-requiring enzyme D3C60_04065 PF02817 e3 binding domain D3C60_04070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3C60_04070 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_04075 PF00158 Sigma-54 interaction domain D3C60_04075 PF01590 GAF domain D3C60_04075 PF02954 Bacterial regulatory protein, Fis family D3C60_04080 PF08141 D3C60_04080 D3C60_04085 PF02056 Family 4 glycosyl hydrolase D3C60_04085 PF11975 Family 4 glycosyl hydrolase C-terminal domain D3C60_04090 PF01380 SIS domain D3C60_04090 PF01418 Helix-turn-helix domain, rpiR family D3C60_04095 PF00367 phosphotransferase system, EIIB D3C60_04095 PF02378 Phosphotransferase system, EIIC D3C60_04100 PF00005 ABC transporter D3C60_04100 PF00664 ABC transporter transmembrane region D3C60_04105 PF00005 ABC transporter D3C60_04105 PF00664 ABC transporter transmembrane region D3C60_04110 PF07681 D3C60_04110 D3C60_04115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_04125 PF01040 UbiA prenyltransferase family D3C60_04130 PF03551 Transcriptional regulator PadR-like family D3C60_04130 PF10400 Virulence activator alpha C-term D3C60_04135 PF02525 Flavodoxin-like fold D3C60_04140 PF01757 D3C60_04140 D3C60_04145 PF00391 PEP-utilising enzyme, mobile domain D3C60_04145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D3C60_04150 PF01337 Barstar (barnase inhibitor) D3C60_04155 PF12867 DinB superfamily D3C60_04160 PF07690 Major Facilitator Superfamily D3C60_04165 PF01047 MarR family D3C60_04170 PF03706 D3C60_04170 D3C60_04170 PF09924 Uncharacterized conserved protein (DUF2156) D3C60_04175 PF02567 Phenazine biosynthesis-like protein D3C60_04180 PF00881 Nitroreductase family D3C60_04185 PF14151 D3C60_04185 D3C60_04190 PF14152 D3C60_04190 D3C60_04195 PF01370 NAD dependent epimerase/dehydratase family D3C60_04195 PF08338 Domain of unknown function (DUF1731) D3C60_04200 PF02631 RecX family D3C60_04205 PF08838 Protein of unknown function (DUF1811) D3C60_04210 PF07690 Major Facilitator Superfamily D3C60_04215 PF10794 D3C60_04215 D3C60_04220 PF00089 Trypsin D3C60_04225 PF08176 D3C60_04225 D3C60_04230 PF14043 D3C60_04230 D3C60_04235 PF08239 Bacterial SH3 domain D3C60_04240 PF13630 D3C60_04240 D3C60_04245 PF00561 alpha/beta hydrolase fold D3C60_04250 PF00535 Glycosyl transferase family 2 D3C60_04255 PF09586 D3C60_04255 D3C60_04260 PF04307 D3C60_04260 D3C60_04265 PF00730 HhH-GPD superfamily base excision DNA repair protein D3C60_04265 PF14815 NUDIX domain D3C60_04275 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_04280 PF04259 D3C60_04280 D3C60_04285 PF14182 D3C60_04285 D3C60_04290 PF04167 Protein of unknown function (DUF402) D3C60_04295 PF00005 ABC transporter D3C60_04295 PF00664 ABC transporter transmembrane region D3C60_04300 PF06081 D3C60_04300 D3C60_04305 PF00202 Aminotransferase class-III D3C60_04310 PF00578 AhpC/TSA family D3C60_04315 PF01475 Ferric uptake regulator family D3C60_04320 PF11023 D3C60_04320 D3C60_04325 PF14540 Nucleotidyltransferase-like D3C60_04425 PF03553 D3C60_04425 D3C60_04430 PF03575 Peptidase family S51 D3C60_04435 PF01964 ThiC family D3C60_04435 PF13667 ThiC-associated domain D3C60_04440 PF01565 FAD binding domain D3C60_04440 PF08031 Berberine and berberine like D3C60_04445 PF13040 D3C60_04445 D3C60_04450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3C60_04455 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_04460 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_04460 PF12911 D3C60_04460 D3C60_04465 PF00005 ABC transporter D3C60_04465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3C60_04470 PF00005 ABC transporter D3C60_04470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3C60_04475 PF00199 Catalase D3C60_04475 PF06628 Catalase-related immune-responsive D3C60_04480 PF04909 Amidohydrolase D3C60_04485 PF00005 ABC transporter D3C60_04490 PF09084 NMT1/THI5 like D3C60_04495 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_04500 PF00296 Luciferase-like monooxygenase D3C60_04505 PF00253 Ribosomal protein S14p/S29e D3C60_04515 PF01381 Helix-turn-helix D3C60_04530 PF08331 D3C60_04530 D3C60_04530 PF13484 D3C60_04530 D3C60_04530 PF13646 HEAT repeats D3C60_04535 PF12671 D3C60_04535 D3C60_04540 PF00588 SpoU rRNA Methylase family D3C60_04545 PF13171 D3C60_04545 D3C60_04550 PF04519 D3C60_04550 D3C60_04565 PF06798 D3C60_04565 D3C60_04565 PF08298 PrkA AAA domain D3C60_04575 PF04285 D3C60_04575 D3C60_04580 PF01047 MarR family D3C60_04585 PF13437 HlyD family secretion protein D3C60_04590 PF07690 Major Facilitator Superfamily D3C60_04595 PF03358 NADPH-dependent FMN reductase D3C60_04610 PF00392 Bacterial regulatory proteins, gntR family D3C60_04615 PF00005 ABC transporter D3C60_04620 PF00005 ABC transporter D3C60_04625 PF12679 D3C60_04625 D3C60_04630 PF00313 'Cold-shock' DNA-binding domain D3C60_04640 PF03180 NLPA lipoprotein D3C60_04645 PF00990 GGDEF domain D3C60_04645 PF07694 5TMR of 5TMR-LYT D3C60_04650 PF00375 Sodium:dicarboxylate symporter family D3C60_04660 PF09580 D3C60_04660 D3C60_04670 PF07875 D3C60_04670 D3C60_04675 PF00149 Calcineurin-like phosphoesterase D3C60_04675 PF02872 5'-nucleotidase, C-terminal domain D3C60_04680 PF04203 Sortase family D3C60_04685 PF00849 RNA pseudouridylate synthase D3C60_04690 PF17326 D3C60_04690 D3C60_04695 PF00571 CBS domain D3C60_04700 PF13419 Haloacid dehalogenase-like hydrolase D3C60_04705 PF00583 Acetyltransferase (GNAT) family D3C60_04705 PF00795 Carbon-nitrogen hydrolase D3C60_04715 PF00202 Aminotransferase class-III D3C60_04720 PF04309 Glycerol-3-phosphate responsive antiterminator D3C60_04725 PF00230 Major intrinsic protein D3C60_04730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D3C60_04730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D3C60_04735 PF01266 FAD dependent oxidoreductase D3C60_04735 PF16901 D3C60_04735 D3C60_04740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3C60_04740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3C60_04740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3C60_04740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3C60_04745 PF07730 Histidine kinase D3C60_04745 PF13185 GAF domain D3C60_04750 PF00072 Response regulator receiver domain D3C60_04750 PF00196 Bacterial regulatory proteins, luxR family D3C60_04755 PF03358 NADPH-dependent FMN reductase D3C60_04760 PF14148 D3C60_04760 D3C60_04765 PF13028 Protein of unknown function (DUF3889) D3C60_04770 PF00877 NlpC/P60 family D3C60_04770 PF01476 LysM domain D3C60_04775 PF02082 Transcriptional regulator D3C60_04780 PF05552 Conserved TM helix D3C60_04785 PF04293 D3C60_04785 D3C60_04790 PF00245 Alkaline phosphatase D3C60_04795 PF00877 NlpC/P60 family D3C60_04795 PF01476 LysM domain D3C60_04800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_04800 PF03466 LysR substrate binding domain D3C60_04805 PF00285 Citrate synthase D3C60_04810 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_04815 PF13520 Amino acid permease D3C60_04820 PF00209 Sodium:neurotransmitter symporter family D3C60_04825 PF17453 D3C60_04825 D3C60_04830 PF13791 D3C60_04830 D3C60_04830 PF13800 D3C60_04830 D3C60_04835 PF04542 Sigma-70 region 2 D3C60_04835 PF08281 Sigma-70, region 4 D3C60_04840 PF01553 Acyltransferase D3C60_04845 PF00571 CBS domain D3C60_04845 PF01595 D3C60_04845 D3C60_04845 PF03471 Transporter associated domain D3C60_04850 PF13411 MerR HTH family regulatory protein D3C60_04855 PF00155 Aminotransferase class I and II D3C60_04860 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_04860 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_04865 PF00571 CBS domain D3C60_04865 PF01595 D3C60_04865 D3C60_04865 PF03471 Transporter associated domain D3C60_04870 PF02537 D3C60_04870 D3C60_04875 PF02537 D3C60_04875 D3C60_04880 PF03009 Glycerophosphoryl diester phosphodiesterase family D3C60_04885 PF17444 D3C60_04885 D3C60_04890 PF00924 Mechanosensitive ion channel D3C60_04895 PF02146 Sir2 family D3C60_04900 PF01522 Polysaccharide deacetylase D3C60_04905 PF01063 Aminotransferase class IV D3C60_04910 PF00440 Bacterial regulatory proteins, tetR family D3C60_04910 PF13977 Bacterial transcriptional repressor D3C60_04920 PF00582 Universal stress protein family D3C60_04925 PF00005 ABC transporter D3C60_04925 PF00664 ABC transporter transmembrane region D3C60_04930 PF00005 ABC transporter D3C60_04930 PF00664 ABC transporter transmembrane region D3C60_04935 PF13460 NADH(P)-binding D3C60_04940 PF00269 Small, acid-soluble spore proteins, alpha/beta type D3C60_04950 PF17277 D3C60_04950 D3C60_04955 PF14398 D3C60_04955 D3C60_04960 PF14398 D3C60_04960 D3C60_04965 PF04286 D3C60_04965 D3C60_04970 PF06133 Protein of unknown function (DUF964) D3C60_04975 PF08713 DNA alkylation repair enzyme D3C60_04980 PF08282 haloacid dehalogenase-like hydrolase D3C60_04985 PF04055 Radical SAM superfamily D3C60_04990 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) D3C60_04995 PF00999 Sodium/hydrogen exchanger family D3C60_05000 PF02080 TrkA-C domain D3C60_05010 PF00378 Enoyl-CoA hydratase/isomerase family D3C60_05015 PF14120 D3C60_05015 D3C60_05020 PF00005 ABC transporter D3C60_05020 PF13732 D3C60_05020 D3C60_05025 PF12698 ABC-2 family transporter protein D3C60_05030 PF00149 Calcineurin-like phosphoesterase D3C60_05035 PF13514 AAA domain D3C60_05040 PF01966 HD domain D3C60_05045 PF14147 D3C60_05045 D3C60_05050 PF05698 Bacterial trigger factor protein (TF) C-terminus D3C60_05050 PF13616 PPIC-type PPIASE domain D3C60_05055 PF09680 D3C60_05055 D3C60_05060 PF09680 D3C60_05060 D3C60_05070 PF11667 D3C60_05070 D3C60_05080 PF08963 Protein of unknown function (DUF1878) D3C60_05085 PF01047 MarR family D3C60_05090 PF12732 D3C60_05090 D3C60_05100 PF17099 D3C60_05100 D3C60_05105 PF00266 Aminotransferase class-V D3C60_05110 PF01230 HIT domain D3C60_05115 PF00005 ABC transporter D3C60_05120 PF05975 D3C60_05120 D3C60_05125 PF12787 D3C60_05125 D3C60_05130 PF01546 Peptidase family M20/M25/M40 D3C60_05130 PF07687 Peptidase dimerisation domain D3C60_05140 PF03992 Antibiotic biosynthesis monooxygenase D3C60_05145 PF00905 Penicillin binding protein transpeptidase domain D3C60_05145 PF00912 Transglycosylase D3C60_05150 PF01208 Uroporphyrinogen decarboxylase (URO-D) D3C60_05155 PF00762 Ferrochelatase D3C60_05160 PF01593 Flavin containing amine oxidoreductase D3C60_05165 PF00440 Bacterial regulatory proteins, tetR family D3C60_05170 PF12698 ABC-2 family transporter protein D3C60_05175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3C60_05175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3C60_05185 PF05343 M42 glutamyl aminopeptidase D3C60_05190 PF00375 Sodium:dicarboxylate symporter family D3C60_05195 PF14149 D3C60_05195 D3C60_05200 PF12706 Beta-lactamase superfamily domain D3C60_05205 PF03099 Biotin/lipoate A/B protein ligase family D3C60_05205 PF10437 Bacterial lipoate protein ligase C-terminus D3C60_05210 PF13460 NADH(P)-binding D3C60_05215 PF00501 AMP-binding enzyme D3C60_05215 PF13193 AMP-binding enzyme C-terminal domain D3C60_05225 PF01435 Peptidase family M48 D3C60_05225 PF16491 D3C60_05225 D3C60_05230 PF00082 Subtilase family D3C60_05230 PF05922 Peptidase inhibitor I9 D3C60_05240 PF01497 Periplasmic binding protein D3C60_05245 PF00300 Histidine phosphatase superfamily (branch 1) D3C60_05250 PF00108 Thiolase, N-terminal domain D3C60_05250 PF02803 Thiolase, C-terminal domain D3C60_05255 PF00501 AMP-binding enzyme D3C60_05255 PF13193 AMP-binding enzyme C-terminal domain D3C60_05260 PF02632 BioY family D3C60_05265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3C60_05265 PF11563 Protoglobin D3C60_05270 PF00355 Rieske [2Fe-2S] domain D3C60_05270 PF01266 FAD dependent oxidoreductase D3C60_05275 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_05280 PF08858 IDEAL domain D3C60_05285 PF06338 D3C60_05285 D3C60_05290 PF08818 Domain of unknown function (DU1801) D3C60_05295 PF08818 Domain of unknown function (DU1801) D3C60_05300 PF13527 Acetyltransferase (GNAT) domain D3C60_05300 PF13530 Sterol carrier protein domain D3C60_05305 PF15493 Domain of unknown function, YrpD D3C60_05310 PF05901 D3C60_05310 D3C60_05315 PF01906 Putative heavy-metal-binding D3C60_05320 PF00474 Sodium:solute symporter family D3C60_05325 PF11755 D3C60_05325 D3C60_05335 PF09335 D3C60_05335 D3C60_05340 PF00717 Peptidase S24-like D3C60_05345 PF01494 FAD binding domain D3C60_05350 PF01047 MarR family D3C60_05355 PF05145 D3C60_05355 D3C60_05360 PF07690 Major Facilitator Superfamily D3C60_05365 PF00440 Bacterial regulatory proteins, tetR family D3C60_05365 PF08360 QacR-like protein, C-terminal region D3C60_05370 PF02915 Rubrerythrin D3C60_05375 PF04239 Protein of unknown function (DUF421) D3C60_05380 PF12705 PD-(D/E)XK nuclease superfamily D3C60_05385 PF00580 UvrD/REP helicase N-terminal domain D3C60_05385 PF12705 PD-(D/E)XK nuclease superfamily D3C60_05385 PF13361 UvrD-like helicase C-terminal domain D3C60_05390 PF00149 Calcineurin-like phosphoesterase D3C60_05395 PF13476 AAA domain D3C60_05395 PF13558 Putative exonuclease SbcCD, C subunit D3C60_05405 PF10676 D3C60_05405 D3C60_05410 PF10970 D3C60_05410 D3C60_05420 PF10737 D3C60_05420 D3C60_05425 PF10803 D3C60_05425 D3C60_05430 PF10676 D3C60_05430 D3C60_05435 PF09388 Spo0E like sporulation regulatory protein D3C60_05440 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3C60_05445 PF07457 D3C60_05445 D3C60_05455 PF10949 D3C60_05455 D3C60_05460 PF00733 Asparagine synthase D3C60_05460 PF13537 Glutamine amidotransferase domain D3C60_05465 PF00494 Squalene/phytoene synthase D3C60_05470 PF01554 MatE D3C60_05475 PF02311 AraC-like ligand binding domain D3C60_05475 PF12833 Helix-turn-helix domain D3C60_05480 PF05163 DinB family D3C60_05490 PF13599 Pentapeptide repeats (9 copies) D3C60_05495 PF13673 Acetyltransferase (GNAT) domain D3C60_05500 PF02219 Methylenetetrahydrofolate reductase D3C60_05500 PF02574 Homocysteine S-methyltransferase D3C60_05505 PF04461 Protein of unknown function (DUF520) D3C60_05510 PF13509 S1 domain D3C60_05515 PF02608 Basic membrane protein D3C60_05520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3C60_05520 PF00672 HAMP domain D3C60_05525 PF00067 Cytochrome P450 D3C60_05535 PF02645 Uncharacterised protein, DegV family COG1307 D3C60_05540 PF02588 D3C60_05540 D3C60_05540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D3C60_05545 PF12690 Intracellular proteinase inhibitor D3C60_05550 PF12758 D3C60_05550 D3C60_05555 PF08282 haloacid dehalogenase-like hydrolase D3C60_05560 PF00326 Prolyl oligopeptidase family D3C60_05565 PF01883 Domain of unknown function DUF59 D3C60_05570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_05575 PF01565 FAD binding domain D3C60_05575 PF04030 D-arabinono-1,4-lactone oxidase D3C60_05580 PF07690 Major Facilitator Superfamily D3C60_05585 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3C60_05585 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3C60_05590 PF01960 ArgJ family D3C60_05595 PF00696 Amino acid kinase family D3C60_05600 PF00202 Aminotransferase class-III D3C60_05605 PF00117 Glutamine amidotransferase class-I D3C60_05605 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D3C60_05610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3C60_05610 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D3C60_05615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D3C60_05615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D3C60_05620 PF14168 D3C60_05620 D3C60_05625 PF11151 D3C60_05625 D3C60_05645 PF02608 Basic membrane protein D3C60_05650 PF10815 D3C60_05650 D3C60_05660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3C60_05660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3C60_05665 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_05665 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_05670 PF10026 D3C60_05670 D3C60_05675 PF00005 ABC transporter D3C60_05675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3C60_05680 PF00005 ABC transporter D3C60_05680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3C60_05685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3C60_05690 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_05695 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_05695 PF12911 D3C60_05695 D3C60_05700 PF12227 D3C60_05700 D3C60_05705 PF00579 tRNA synthetases class I (W and Y) D3C60_05710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3C60_05715 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_05720 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_05720 PF12911 D3C60_05720 D3C60_05725 PF00005 ABC transporter D3C60_05725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3C60_05730 PF00005 ABC transporter D3C60_05730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3C60_05735 PF13200 D3C60_05735 D3C60_05740 PF13508 Acetyltransferase (GNAT) domain D3C60_05745 PF03960 ArsC family D3C60_05750 PF03741 D3C60_05750 D3C60_05755 PF05389 Negative regulator of genetic competence (MecA) D3C60_05760 PF06054 D3C60_05760 D3C60_05765 PF01432 Peptidase family M3 D3C60_05765 PF08439 Oligopeptidase F D3C60_05770 PF13743 Thioredoxin D3C60_05775 PF01152 Bacterial-like globin D3C60_05780 PF01464 Transglycosylase SLT domain D3C60_05785 PF01928 CYTH domain D3C60_05795 PF04607 Region found in RelA / SpoT proteins D3C60_05800 PF01513 ATP-NAD kinase D3C60_05805 PF00849 RNA pseudouridylate synthase D3C60_05810 PF00149 Calcineurin-like phosphoesterase D3C60_05820 PF00999 Sodium/hydrogen exchanger family D3C60_05820 PF02080 TrkA-C domain D3C60_05820 PF02254 TrkA-N domain D3C60_05825 PF03070 TENA/THI-4/PQQC family D3C60_05830 PF02581 Thiamine monophosphate synthase/TENI D3C60_05835 PF01266 FAD dependent oxidoreductase D3C60_05840 PF02597 ThiS family D3C60_05845 PF05690 Thiazole biosynthesis protein ThiG D3C60_05850 PF00899 ThiF family D3C60_05855 PF08543 Phosphomethylpyrimidine kinase D3C60_05860 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_05865 PF14153 D3C60_05865 D3C60_05870 PF10612 D3C60_05870 D3C60_05875 PF10612 D3C60_05875 D3C60_05880 PF07552 D3C60_05880 D3C60_05890 PF07552 D3C60_05890 D3C60_05895 PF07098 D3C60_05895 D3C60_05905 PF09680 D3C60_05905 D3C60_05910 PF14069 D3C60_05910 D3C60_05915 PF00580 UvrD/REP helicase N-terminal domain D3C60_05915 PF13361 UvrD-like helicase C-terminal domain D3C60_05925 PF00753 Metallo-beta-lactamase superfamily D3C60_05930 PF01061 D3C60_05930 D3C60_05935 PF00005 ABC transporter D3C60_05940 PF04014 Antidote-toxin recognition MazE D3C60_05945 PF13673 Acetyltransferase (GNAT) domain D3C60_05950 PF13563 2'-5' RNA ligase superfamily D3C60_05955 PF00756 Putative esterase D3C60_05960 PF01053 Cys/Met metabolism PLP-dependent enzyme D3C60_05965 PF01053 Cys/Met metabolism PLP-dependent enzyme D3C60_06010 PF04740 D3C60_06010 D3C60_06025 PF13354 Beta-lactamase enzyme family D3C60_06030 PF03992 Antibiotic biosynthesis monooxygenase D3C60_06035 PF07690 Major Facilitator Superfamily D3C60_06040 PF01047 MarR family D3C60_06045 PF07745 Glycosyl hydrolase family 53 D3C60_06050 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D3C60_06050 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D3C60_06055 PF01370 NAD dependent epimerase/dehydratase family D3C60_06060 PF00288 GHMP kinases N terminal domain D3C60_06060 PF08544 GHMP kinases C terminal D3C60_06060 PF10509 Galactokinase galactose-binding signature D3C60_06065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3C60_06065 PF02378 Phosphotransferase system, EIIC D3C60_06070 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D3C60_06075 PF00232 Glycosyl hydrolase family 1 D3C60_06080 PF00455 D3C60_06080 D3C60_06080 PF08220 DeoR-like helix-turn-helix domain D3C60_06085 PF13419 Haloacid dehalogenase-like hydrolase D3C60_06095 PF01047 MarR family D3C60_06105 PF02308 D3C60_06105 D3C60_06115 PF14070 D3C60_06115 D3C60_06120 PF10990 D3C60_06120 D3C60_06125 PF14172 D3C60_06125 D3C60_06130 PF00384 Molybdopterin oxidoreductase D3C60_06130 PF01568 Molydopterin dinucleotide binding domain D3C60_06130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3C60_06130 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3C60_06130 PF12838 4Fe-4S dicluster domain D3C60_06130 PF13510 2Fe-2S iron-sulfur cluster binding domain D3C60_06135 PF07849 D3C60_06135 D3C60_06140 PF00067 Cytochrome P450 D3C60_06145 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase D3C60_06155 PF02602 Uroporphyrinogen-III synthase HemD D3C60_06160 PF03649 D3C60_06160 D3C60_06165 PF00005 ABC transporter D3C60_06170 PF13536 Multidrug resistance efflux transporter D3C60_06175 PF07883 Cupin domain D3C60_06180 PF07849 D3C60_06180 D3C60_06185 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_06190 PF02614 Glucuronate isomerase D3C60_06195 PF13347 MFS/sugar transport protein D3C60_06200 PF00356 Bacterial regulatory proteins, lacI family D3C60_06200 PF13377 Periplasmic binding protein-like domain D3C60_06205 PF01232 Mannitol dehydrogenase Rossmann domain D3C60_06205 PF08125 Mannitol dehydrogenase C-terminal domain D3C60_06210 PF04295 D3C60_06210 D3C60_06210 PF08666 SAF domain D3C60_06215 PF01925 D3C60_06215 D3C60_06220 PF05163 DinB family D3C60_06225 PF13424 Tetratricopeptide repeat D3C60_06230 PF01471 Putative peptidoglycan binding domain D3C60_06230 PF01476 LysM domain D3C60_06230 PF01510 N-acetylmuramoyl-L-alanine amidase D3C60_06235 PF08000 Bacterial PH domain D3C60_06240 PF05908 Protein of unknown function (DUF867) D3C60_06245 PF06114 Domain of unknown function (DUF955) D3C60_06250 PF12844 Helix-turn-helix domain D3C60_06265 PF01695 IstB-like ATP binding protein D3C60_06275 PF17356 D3C60_06275 D3C60_06280 PF08281 Sigma-70, region 4 D3C60_06285 PF03592 Terminase small subunit D3C60_06285 PF10668 D3C60_06285 D3C60_06290 PF04466 Phage terminase large subunit D3C60_06290 PF17288 D3C60_06290 D3C60_06295 PF04860 Phage portal protein D3C60_06300 PF14550 D3C60_06300 D3C60_06305 PF05065 Phage capsid family D3C60_06310 PF11436 Protein of unknown function (DUF3199) D3C60_06315 PF12206 Domain of unknown function (DUF3599) D3C60_06320 PF04883 D3C60_06320 D3C60_06335 PF04984 Phage tail sheath protein D3C60_06335 PF17481 D3C60_06335 D3C60_06335 PF17482 D3C60_06335 D3C60_06340 PF09393 Protein of unknown function (DUF2001) D3C60_06345 PF08890 Phage XkdN-like protein D3C60_06355 PF01464 Transglycosylase SLT domain D3C60_06360 PF01476 LysM domain D3C60_06370 PF10844 D3C60_06370 D3C60_06375 PF10934 D3C60_06375 D3C60_06380 PF04865 D3C60_06380 D3C60_06385 PF10076 D3C60_06385 D3C60_06400 PF09636 XkdW protein D3C60_06405 PF09693 D3C60_06405 D3C60_06415 PF10779 D3C60_06415 D3C60_06420 PF04688 D3C60_06420 D3C60_06425 PF01471 Putative peptidoglycan binding domain D3C60_06425 PF01476 LysM domain D3C60_06425 PF01510 N-acetylmuramoyl-L-alanine amidase D3C60_06430 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system D3C60_06435 PF14171 Toxin SpoIISA, type II toxin-antitoxin system D3C60_06440 PF01384 D3C60_06440 D3C60_06445 PF01865 Protein of unknown function DUF47 D3C60_06450 PF13520 Amino acid permease D3C60_06455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_06460 PF13231 D3C60_06460 D3C60_06465 PF00535 Glycosyl transferase family 2 D3C60_06470 PF13180 PDZ domain D3C60_06470 PF13365 Trypsin-like peptidase domain D3C60_06475 PF07690 Major Facilitator Superfamily D3C60_06480 PF04951 D-aminopeptidase D3C60_06485 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_06490 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_06490 PF12911 D3C60_06490 D3C60_06495 PF00005 ABC transporter D3C60_06495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3C60_06500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3C60_06505 PF02016 LD-carboxypeptidase D3C60_06510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D3C60_06510 PF13378 Enolase C-terminal domain-like D3C60_06515 PF00877 NlpC/P60 family D3C60_06520 PF00005 ABC transporter D3C60_06520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3C60_06525 PF10282 Lactonase, 7-bladed beta-propeller D3C60_06530 PF02274 Amidinotransferase D3C60_06535 PF03061 Thioesterase superfamily D3C60_06540 PF13302 Acetyltransferase (GNAT) domain D3C60_06545 PF00893 Small Multidrug Resistance protein D3C60_06550 PF00893 Small Multidrug Resistance protein D3C60_06555 PF00551 Formyl transferase D3C60_06555 PF01842 ACT domain D3C60_06560 PF00696 Amino acid kinase family D3C60_06560 PF01472 PUA domain D3C60_06565 PF00171 Aldehyde dehydrogenase family D3C60_06570 PF02566 OsmC-like protein D3C60_06575 PF01047 MarR family D3C60_06580 PF02566 OsmC-like protein D3C60_06595 PF00535 Glycosyl transferase family 2 D3C60_06605 PF12832 MFS_1 like family D3C60_06610 PF00027 Cyclic nucleotide-binding domain D3C60_06615 PF01717 Cobalamin-independent synthase, Catalytic domain D3C60_06615 PF08267 Cobalamin-independent synthase, N-terminal domain D3C60_06620 PF00082 Subtilase family D3C60_06625 PF01740 STAS domain D3C60_06630 PF02361 Cobalt transport protein D3C60_06635 PF00005 ABC transporter D3C60_06640 PF09819 D3C60_06640 D3C60_06645 PF00704 Glycosyl hydrolases family 18 D3C60_06645 PF01476 LysM domain D3C60_06650 PF11132 D3C60_06650 D3C60_06665 PF00571 CBS domain D3C60_06665 PF01769 Divalent cation transporter D3C60_06665 PF03448 MgtE intracellular N domain D3C60_06670 PF13411 MerR HTH family regulatory protein D3C60_06680 PF13076 D3C60_06680 D3C60_06685 PF01047 MarR family D3C60_06695 PF01068 ATP dependent DNA ligase domain D3C60_06700 PF02735 Ku70/Ku80 beta-barrel domain D3C60_06705 PF09335 D3C60_06705 D3C60_06710 PF03741 D3C60_06710 D3C60_06715 PF04542 Sigma-70 region 2 D3C60_06720 PF12791 D3C60_06720 D3C60_06725 PF00269 Small, acid-soluble spore proteins, alpha/beta type D3C60_06730 PF08876 D3C60_06730 D3C60_06735 PF01435 Peptidase family M48 D3C60_06740 PF02386 Cation transport protein D3C60_06745 PF04239 Protein of unknown function (DUF421) D3C60_06755 PF01757 D3C60_06755 D3C60_06760 PF00512 His Kinase A (phospho-acceptor) domain D3C60_06760 PF00989 PAS fold D3C60_06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_06760 PF13188 PAS domain D3C60_06760 PF13426 PAS domain D3C60_06765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3C60_06765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D3C60_06770 PF01008 Initiation factor 2 subunit family D3C60_06775 PF01636 Phosphotransferase enzyme family D3C60_06780 PF00795 Carbon-nitrogen hydrolase D3C60_06785 PF00155 Aminotransferase class I and II D3C60_06790 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain D3C60_06790 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain D3C60_06795 PF12710 haloacid dehalogenase-like hydrolase D3C60_06800 PF00596 Class II Aldolase and Adducin N-terminal domain D3C60_06805 PF03079 ARD/ARD' family D3C60_06810 PF09388 Spo0E like sporulation regulatory protein D3C60_06815 PF00512 His Kinase A (phospho-acceptor) domain D3C60_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_06815 PF02743 Cache domain D3C60_06820 PF01047 MarR family D3C60_06825 PF00691 OmpA family D3C60_06825 PF13677 D3C60_06825 D3C60_06830 PF01618 D3C60_06830 D3C60_06835 PF00004 ATPase family associated with various cellular activities (AAA) D3C60_06835 PF02151 UvrB/uvrC motif D3C60_06835 PF07724 AAA domain (Cdc48 subfamily) D3C60_06835 PF10431 C-terminal, D2-small domain, of ClpB protein D3C60_06855 PF06508 Queuosine biosynthesis protein QueC D3C60_06860 PF01242 6-pyruvoyl tetrahydropterin synthase D3C60_06865 PF04055 Radical SAM superfamily D3C60_06865 PF13394 4Fe-4S single cluster domain D3C60_06870 PF14489 QueF-like protein D3C60_06875 PF01638 HxlR-like helix-turn-helix D3C60_06880 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_06890 PF01476 LysM domain D3C60_06890 PF13524 Glycosyl transferases group 1 D3C60_06895 PF01476 LysM domain D3C60_06900 PF00704 Glycosyl hydrolases family 18 D3C60_06910 PF11514 Protein of unknown function (DUF3219) D3C60_06915 PF09953 D3C60_06915 D3C60_06925 PF07486 Cell Wall Hydrolase D3C60_06930 PF01943 D3C60_06930 D3C60_06930 PF14667 Polysaccharide biosynthesis C-terminal domain D3C60_06935 PF00578 AhpC/TSA family D3C60_06940 PF00122 E1-E2 ATPase D3C60_06940 PF00702 haloacid dehalogenase-like hydrolase D3C60_06945 PF00557 Metallopeptidase family M24 D3C60_06945 PF01321 Creatinase/Prolidase N-terminal domain D3C60_06950 PF00356 Bacterial regulatory proteins, lacI family D3C60_06950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3C60_06955 PF00874 PRD domain D3C60_06955 PF03123 CAT RNA binding domain D3C60_06960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D3C60_06960 PF00367 phosphotransferase system, EIIB D3C60_06960 PF02378 Phosphotransferase system, EIIC D3C60_06965 PF00381 PTS HPr component phosphorylation site D3C60_06970 PF00391 PEP-utilising enzyme, mobile domain D3C60_06970 PF02896 PEP-utilising enzyme, TIM barrel domain D3C60_06970 PF05524 PEP-utilising enzyme, N-terminal D3C60_06975 PF11132 D3C60_06975 D3C60_06985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3C60_06985 PF00672 HAMP domain D3C60_06985 PF02743 Cache domain D3C60_06990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3C60_06990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3C60_06995 PF00188 Cysteine-rich secretory protein family D3C60_07000 PF00905 Penicillin binding protein transpeptidase domain D3C60_07000 PF03717 Penicillin-binding Protein dimerisation domain D3C60_07005 PF00512 His Kinase A (phospho-acceptor) domain D3C60_07005 PF00989 PAS fold D3C60_07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_07005 PF08447 PAS fold D3C60_07010 PF00155 Aminotransferase class I and II D3C60_07020 PF00072 Response regulator receiver domain D3C60_07020 PF01584 CheW-like domain D3C60_07025 PF14177 D3C60_07025 D3C60_07030 PF07690 Major Facilitator Superfamily D3C60_07035 PF01476 LysM domain D3C60_07035 PF03734 L,D-transpeptidase catalytic domain D3C60_07040 PF00149 Calcineurin-like phosphoesterase D3C60_07045 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_07055 PF00563 EAL domain D3C60_07055 PF10388 EAL-domain associated signalling protein domain D3C60_07060 PF08796 Protein of unknown function (DUF1797) D3C60_07065 PF04308 D3C60_07065 D3C60_07070 PF14156 Antirepressor AbbA D3C60_07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_07080 PF03466 LysR substrate binding domain D3C60_07085 PF00258 Flavodoxin D3C60_07095 PF00258 Flavodoxin D3C60_07100 PF00132 Bacterial transferase hexapeptide (six repeats) D3C60_07100 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal D3C60_07100 PF14602 Hexapeptide repeat of succinyl-transferase D3C60_07105 PF01546 Peptidase family M20/M25/M40 D3C60_07105 PF07687 Peptidase dimerisation domain D3C60_07110 PF03698 D3C60_07110 D3C60_07115 PF00924 Mechanosensitive ion channel D3C60_07120 PF00578 AhpC/TSA family D3C60_07135 PF12804 MobA-like NTP transferase domain D3C60_07140 PF00899 ThiF family D3C60_07145 PF00994 Probable molybdopterin binding domain D3C60_07145 PF03453 MoeA N-terminal region (domain I and II) D3C60_07145 PF03454 MoeA C-terminal region (domain IV) D3C60_07150 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D3C60_07155 PF02391 MoaE protein D3C60_07160 PF02597 ThiS family D3C60_07165 PF04893 D3C60_07165 D3C60_07170 PF16576 D3C60_07170 D3C60_07175 PF00005 ABC transporter D3C60_07180 PF02687 D3C60_07180 D3C60_07180 PF12704 MacB-like periplasmic core domain D3C60_07185 PF00455 D3C60_07185 D3C60_07185 PF08220 DeoR-like helix-turn-helix domain D3C60_07190 PF00294 pfkB family carbohydrate kinase D3C60_07195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3C60_07195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3C60_07200 PF00717 Peptidase S24-like D3C60_07210 PF00005 ABC transporter D3C60_07210 PF12848 ABC transporter D3C60_07215 PF02558 Ketopantoate reductase PanE/ApbA D3C60_07215 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3C60_07220 PF02073 Thermophilic metalloprotease (M29) D3C60_07225 PF17447 D3C60_07225 D3C60_07230 PF06723 MreB/Mbl protein D3C60_07240 PF04014 Antidote-toxin recognition MazE D3C60_07245 PF00512 His Kinase A (phospho-acceptor) domain D3C60_07245 PF00989 PAS fold D3C60_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_07250 PF06094 AIG2-like family D3C60_07255 PF02080 TrkA-C domain D3C60_07255 PF02254 TrkA-N domain D3C60_07260 PF01979 Amidohydrolase family D3C60_07260 PF13382 Adenine deaminase C-terminal domain D3C60_07270 PF00753 Metallo-beta-lactamase superfamily D3C60_07270 PF07521 RNA-metabolising metallo-beta-lactamase D3C60_07275 PF07288 Protein of unknown function (DUF1447) D3C60_07280 PF08282 haloacid dehalogenase-like hydrolase D3C60_07285 PF01327 Polypeptide deformylase D3C60_07290 PF09680 D3C60_07290 D3C60_07295 PF10368 Putative cell-wall binding lipoprotein D3C60_07305 PF00698 Acyl transferase domain D3C60_07310 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_07310 PF00550 Phosphopantetheine attachment site D3C60_07310 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_07310 PF08659 KR domain D3C60_07310 PF14765 Polyketide synthase dehydratase D3C60_07310 PF16197 D3C60_07310 D3C60_07315 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_07315 PF00550 Phosphopantetheine attachment site D3C60_07315 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_07315 PF08659 KR domain D3C60_07315 PF14765 Polyketide synthase dehydratase D3C60_07315 PF16197 D3C60_07315 D3C60_07320 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_07320 PF00550 Phosphopantetheine attachment site D3C60_07320 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_07320 PF08659 KR domain D3C60_07320 PF14765 Polyketide synthase dehydratase D3C60_07320 PF16197 D3C60_07320 D3C60_07325 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_07325 PF00550 Phosphopantetheine attachment site D3C60_07325 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_07325 PF08659 KR domain D3C60_07325 PF16197 D3C60_07325 D3C60_07330 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_07330 PF00550 Phosphopantetheine attachment site D3C60_07330 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_07330 PF08659 KR domain D3C60_07330 PF14765 Polyketide synthase dehydratase D3C60_07330 PF16197 D3C60_07330 D3C60_07335 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_07335 PF00550 Phosphopantetheine attachment site D3C60_07335 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_07335 PF08659 KR domain D3C60_07335 PF16197 D3C60_07335 D3C60_07340 PF00550 Phosphopantetheine attachment site D3C60_07340 PF00561 alpha/beta hydrolase fold D3C60_07340 PF08659 KR domain D3C60_07340 PF14765 Polyketide synthase dehydratase D3C60_07345 PF00144 Beta-lactamase D3C60_07350 PF00676 Dehydrogenase E1 component D3C60_07355 PF02779 Transketolase, pyrimidine binding domain D3C60_07355 PF02780 Transketolase, C-terminal domain D3C60_07360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3C60_07360 PF00364 Biotin-requiring enzyme D3C60_07360 PF02817 e3 binding domain D3C60_07365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3C60_07365 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_07375 PF01522 Polysaccharide deacetylase D3C60_07380 PF13790 D3C60_07380 D3C60_07385 PF01276 Orn/Lys/Arg decarboxylase, major domain D3C60_07385 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D3C60_07390 PF05256 Uncharacterised protein family (UPF0223) D3C60_07395 PF06335 Protein of unknown function (DUF1054) D3C60_07410 PF00459 Inositol monophosphatase family D3C60_07415 PF00583 Acetyltransferase (GNAT) family D3C60_07420 PF01447 Thermolysin metallopeptidase, catalytic domain D3C60_07420 PF02868 Thermolysin metallopeptidase, alpha-helical domain D3C60_07420 PF03413 Peptidase propeptide and YPEB domain D3C60_07420 PF07504 Fungalysin/Thermolysin Propeptide Motif D3C60_07430 PF13490 Putative zinc-finger D3C60_07440 PF17259 D3C60_07440 D3C60_07445 PF00009 Elongation factor Tu GTP binding domain D3C60_07445 PF00679 Elongation factor G C-terminus D3C60_07445 PF03144 Elongation factor Tu domain 2 D3C60_07445 PF14492 Elongation Factor G, domain II D3C60_07450 PF14036 D3C60_07450 D3C60_07455 PF09963 D3C60_07455 D3C60_07460 PF09580 D3C60_07460 D3C60_07465 PF02562 PhoH-like protein D3C60_07465 PF13638 PIN domain D3C60_07475 PF04960 Glutaminase D3C60_07480 PF07408 Protein of unknown function (DUF1507) D3C60_07485 PF01098 D3C60_07485 D3C60_07490 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain D3C60_07490 PF00364 Biotin-requiring enzyme D3C60_07490 PF00682 HMGL-like D3C60_07490 PF02436 Conserved carboxylase domain D3C60_07490 PF02785 Biotin carboxylase C-terminal domain D3C60_07490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3C60_07495 PF02628 D3C60_07495 D3C60_07500 PF01040 UbiA prenyltransferase family D3C60_07505 PF00034 Cytochrome c D3C60_07505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3C60_07505 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D3C60_07510 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3C60_07515 PF00510 Cytochrome c oxidase subunit III D3C60_07520 PF03626 D3C60_07520 D3C60_07525 PF09678 D3C60_07525 D3C60_07535 PF08868 YugN-like family D3C60_07540 PF00571 CBS domain D3C60_07545 PF00188 Cysteine-rich secretory protein family D3C60_07545 PF14504 CAP-associated N-terminal D3C60_07550 PF14071 D3C60_07550 D3C60_07555 PF14003 D3C60_07555 D3C60_07560 PF06133 Protein of unknown function (DUF964) D3C60_07565 PF09902 D3C60_07565 D3C60_07575 PF03602 Conserved hypothetical protein 95 D3C60_07580 PF01467 Cytidylyltransferase D3C60_07585 PF07670 Nucleoside recognition D3C60_07590 PF01734 Patatin-like phospholipase D3C60_07595 PF05362 Lon protease (S16) C-terminal proteolytic domain D3C60_07595 PF13180 PDZ domain D3C60_07600 PF05636 HIGH Nucleotidyl Transferase D3C60_07605 PF02620 D3C60_07605 D3C60_07610 PF01783 Ribosomal L32p protein family D3C60_07615 PF13921 Myb-like DNA-binding domain D3C60_07620 PF00583 Acetyltransferase (GNAT) family D3C60_07625 PF02558 Ketopantoate reductase PanE/ApbA D3C60_07625 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3C60_07630 PF10079 D3C60_07630 D3C60_07635 PF02381 MraZ protein D3C60_07640 PF01795 MraW methylase family D3C60_07650 PF00905 Penicillin binding protein transpeptidase domain D3C60_07650 PF03717 Penicillin-binding Protein dimerisation domain D3C60_07650 PF03793 PASTA domain D3C60_07655 PF00905 Penicillin binding protein transpeptidase domain D3C60_07655 PF03717 Penicillin-binding Protein dimerisation domain D3C60_07655 PF03793 PASTA domain D3C60_07660 PF01225 Mur ligase family, catalytic domain D3C60_07660 PF02875 Mur ligase family, glutamate ligase domain D3C60_07660 PF08245 Mur ligase middle domain D3C60_07665 PF00953 Glycosyl transferase family 4 D3C60_07665 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D3C60_07670 PF02875 Mur ligase family, glutamate ligase domain D3C60_07670 PF08245 Mur ligase middle domain D3C60_07675 PF01098 D3C60_07675 D3C60_07680 PF03033 Glycosyltransferase family 28 N-terminal domain D3C60_07680 PF04101 Glycosyltransferase family 28 C-terminal domain D3C60_07685 PF01565 FAD binding domain D3C60_07685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D3C60_07690 PF03799 Cell division protein FtsQ D3C60_07690 PF08478 POTRA domain, FtsQ-type D3C60_07695 PF02491 SHS2 domain inserted in FTSA D3C60_07695 PF14450 Cell division protein FtsA D3C60_07700 PF00091 Tubulin/FtsZ family, GTPase domain D3C60_07700 PF12327 FtsZ family, C-terminal domain D3C60_07705 PF00082 Subtilase family D3C60_07705 PF05547 D3C60_07705 D3C60_07705 PF05922 Peptidase inhibitor I9 D3C60_07705 PF13715 D3C60_07705 D3C60_07710 PF03419 D3C60_07710 D3C60_07715 PF04542 Sigma-70 region 2 D3C60_07715 PF04545 Sigma-70, region 4 D3C60_07720 PF04539 Sigma-70 region 3 D3C60_07720 PF04542 Sigma-70 region 2 D3C60_07720 PF04545 Sigma-70, region 4 D3C60_07725 PF00005 ABC transporter D3C60_07730 PF01546 Peptidase family M20/M25/M40 D3C60_07730 PF07687 Peptidase dimerisation domain D3C60_07735 PF05239 PRC-barrel domain D3C60_07740 PF02578 Multi-copper polyphenol oxidoreductase laccase D3C60_07745 PF01168 Alanine racemase, N-terminal domain D3C60_07750 PF04472 Protein of unknown function (DUF552) D3C60_07755 PF02325 D3C60_07755 D3C60_07760 PF01479 S4 domain D3C60_07765 PF05103 DivIVA protein D3C60_07775 PF00133 tRNA synthetases class I (I, L, M and V) D3C60_07775 PF08264 Anticodon-binding domain of tRNA D3C60_07785 PF01252 D3C60_07785 D3C60_07790 PF00849 RNA pseudouridylate synthase D3C60_07790 PF01479 S4 domain D3C60_07795 PF00156 Phosphoribosyl transferase domain D3C60_07800 PF00860 Permease family D3C60_07805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D3C60_07805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D3C60_07810 PF01979 Amidohydrolase family D3C60_07815 PF00117 Glutamine amidotransferase class-I D3C60_07815 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D3C60_07820 PF02142 MGS-like domain D3C60_07820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3C60_07820 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D3C60_07825 PF00175 Oxidoreductase NAD-binding domain D3C60_07825 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B D3C60_07830 PF01180 Dihydroorotate dehydrogenase D3C60_07835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D3C60_07840 PF00156 Phosphoribosyl transferase domain D3C60_07845 PF01507 Phosphoadenosine phosphosulfate reductase family D3C60_07850 PF01384 D3C60_07850 D3C60_07855 PF01747 ATP-sulfurylase D3C60_07855 PF14306 PUA-like domain D3C60_07860 PF01583 Adenylylsulphate kinase D3C60_07865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3C60_07870 PF01903 CbiX D3C60_07875 PF13241 Putative NAD(P)-binding D3C60_07885 PF05670 D3C60_07885 D3C60_07885 PF05833 Fibronectin-binding protein A N-terminus (FbpA) D3C60_07890 PF00122 E1-E2 ATPase D3C60_07890 PF00689 Cation transporting ATPase, C-terminus D3C60_07890 PF00690 Cation transporter/ATPase, N-terminus D3C60_07890 PF00702 haloacid dehalogenase-like hydrolase D3C60_07895 PF03755 D3C60_07895 D3C60_07895 PF08340 D3C60_07895 D3C60_07900 PF04025 D3C60_07900 D3C60_07905 PF00625 Guanylate kinase D3C60_07910 PF01192 RNA polymerase Rpb6 D3C60_07915 PF02441 Flavoprotein D3C60_07915 PF04127 DNA / pantothenate metabolism flavoprotein D3C60_07920 PF00271 Helicase conserved C-terminal domain D3C60_07920 PF04851 Type III restriction enzyme, res subunit D3C60_07925 PF01327 Polypeptide deformylase D3C60_07930 PF00551 Formyl transferase D3C60_07930 PF02911 Formyl transferase, C-terminal domain D3C60_07935 PF01029 NusB family D3C60_07935 PF01189 NOL1/NOP2/sun family D3C60_07940 PF04055 Radical SAM superfamily D3C60_07940 PF13394 4Fe-4S single cluster domain D3C60_07945 PF13672 Protein phosphatase 2C D3C60_07950 PF00069 Protein kinase domain D3C60_07950 PF03793 PASTA domain D3C60_07955 PF03193 Protein of unknown function, DUF258 D3C60_07955 PF16745 D3C60_07955 D3C60_07960 PF00834 Ribulose-phosphate 3 epimerase family D3C60_07965 PF04263 Thiamin pyrophosphokinase, catalytic domain D3C60_07965 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain D3C60_07970 PF08183 D3C60_07970 D3C60_07975 PF00830 Ribosomal L28 family D3C60_07980 PF03780 D3C60_07980 D3C60_07985 PF02734 DAK2 domain D3C60_07985 PF13684 Dihydroxyacetone kinase family D3C60_07990 PF01842 ACT domain D3C60_07990 PF03315 Serine dehydratase beta chain D3C60_07995 PF03313 D3C60_07995 D3C60_08000 PF00270 DEAD/DEAH box helicase D3C60_08000 PF00271 Helicase conserved C-terminal domain D3C60_08000 PF17191 D3C60_08000 D3C60_08005 PF03061 Thioesterase superfamily D3C60_08010 PF02504 Fatty acid synthesis protein D3C60_08015 PF00698 Acyl transferase domain D3C60_08020 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_08025 PF00550 Phosphopantetheine attachment site D3C60_08030 PF00035 Double-stranded RNA binding motif D3C60_08030 PF14622 Ribonuclease-III-like D3C60_08035 PF02463 RecF/RecN/SMC N terminal domain D3C60_08035 PF06470 SMC proteins Flexible Hinge Domain D3C60_08040 PF00448 SRP54-type protein, GTPase domain D3C60_08040 PF02881 SRP54-type protein, helical bundle domain D3C60_08045 PF01636 Phosphotransferase enzyme family D3C60_08050 PF04297 Putative helix-turn-helix protein, YlxM / p13 like D3C60_08055 PF00448 SRP54-type protein, GTPase domain D3C60_08055 PF02881 SRP54-type protein, helical bundle domain D3C60_08055 PF02978 Signal peptide binding domain D3C60_08060 PF00886 Ribosomal protein S16 D3C60_08065 PF13083 KH domain D3C60_08070 PF11068 YlqD protein D3C60_08075 PF01782 RimM N-terminal domain D3C60_08075 PF05239 PRC-barrel domain D3C60_08080 PF01746 tRNA (Guanine-1)-methyltransferase D3C60_08085 PF01245 Ribosomal protein L19 D3C60_08090 PF01926 50S ribosome-binding GTPase D3C60_08095 PF01351 Ribonuclease HII D3C60_08105 PF01312 FlhB HrpN YscU SpaS Family D3C60_08110 PF00549 CoA-ligase D3C60_08110 PF08442 ATP-grasp domain D3C60_08115 PF00549 CoA-ligase D3C60_08115 PF02629 CoA binding domain D3C60_08120 PF02481 DNA recombination-mediator protein A D3C60_08125 PF01131 DNA topoisomerase D3C60_08125 PF01396 D3C60_08125 D3C60_08125 PF01751 Toprim domain D3C60_08130 PF01134 Glucose inhibited division protein A D3C60_08135 PF00589 Phage integrase family D3C60_08135 PF02899 Phage integrase, N-terminal SAM-like domain D3C60_08140 PF00227 Proteasome subunit D3C60_08145 PF00004 ATPase family associated with various cellular activities (AAA) D3C60_08145 PF07724 AAA domain (Cdc48 subfamily) D3C60_08145 PF10431 C-terminal, D2-small domain, of ClpB protein D3C60_08150 PF06018 CodY GAF-like domain D3C60_08150 PF08222 CodY helix-turn-helix domain D3C60_08155 PF00460 Flagella basal body rod protein D3C60_08160 PF00460 Flagella basal body rod protein D3C60_08160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3C60_08165 PF02049 D3C60_08165 D3C60_08170 PF01514 Secretory protein of YscJ/FliF family D3C60_08170 PF08345 D3C60_08170 D3C60_08175 PF01706 FliG C-terminal domain D3C60_08175 PF14841 FliG middle domain D3C60_08175 PF14842 FliG N-terminal domain D3C60_08180 PF02108 D3C60_08180 D3C60_08185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3C60_08185 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3C60_08190 PF02050 Flagellar FliJ protein D3C60_08195 PF03448 MgtE intracellular N domain D3C60_08200 PF02120 Flagellar hook-length control protein FliK D3C60_08205 PF03963 D3C60_08205 D3C60_08210 PF00460 Flagella basal body rod protein D3C60_08210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3C60_08215 PF06289 D3C60_08215 D3C60_08220 PF03748 D3C60_08220 D3C60_08225 PF01052 Surface presentation of antigens (SPOA) D3C60_08225 PF02154 Flagellar motor switch protein FliM D3C60_08230 PF01052 Surface presentation of antigens (SPOA) D3C60_08230 PF04509 CheC-like family D3C60_08235 PF00072 Response regulator receiver domain D3C60_08240 PF04347 D3C60_08240 D3C60_08245 PF00813 D3C60_08245 D3C60_08250 PF01313 D3C60_08250 D3C60_08255 PF01311 D3C60_08255 D3C60_08260 PF01312 FlhB HrpN YscU SpaS Family D3C60_08265 PF00771 FHIPEP family D3C60_08270 PF00448 SRP54-type protein, GTPase domain D3C60_08275 PF10609 ParA/MinD ATPase like D3C60_08280 PF00072 Response regulator receiver domain D3C60_08280 PF01339 CheB methylesterase D3C60_08285 PF01584 CheW-like domain D3C60_08285 PF01627 Hpt domain D3C60_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_08285 PF02895 Signal transducing histidine kinase, homodimeric domain D3C60_08285 PF07194 P2 response regulator binding domain D3C60_08290 PF01584 CheW-like domain D3C60_08295 PF04509 CheC-like family D3C60_08300 PF03975 CheD chemotactic sensory transduction D3C60_08305 PF04539 Sigma-70 region 3 D3C60_08305 PF04542 Sigma-70 region 2 D3C60_08305 PF04545 Sigma-70, region 4 D3C60_08315 PF00318 Ribosomal protein S2 D3C60_08320 PF00889 Elongation factor TS D3C60_08325 PF00696 Amino acid kinase family D3C60_08330 PF01765 Ribosome recycling factor D3C60_08335 PF01255 Putative undecaprenyl diphosphate synthase D3C60_08340 PF01148 Cytidylyltransferase family D3C60_08345 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D3C60_08345 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal D3C60_08345 PF13288 DXP reductoisomerase C-terminal domain D3C60_08350 PF02163 Peptidase family M50 D3C60_08350 PF13180 PDZ domain D3C60_08355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3C60_08355 PF03129 Anticodon binding domain D3C60_08355 PF04073 Aminoacyl-tRNA editing domain D3C60_08360 PF00929 Exonuclease D3C60_08360 PF02811 PHP domain D3C60_08360 PF07733 Bacterial DNA polymerase III alpha subunit D3C60_08360 PF11490 D3C60_08360 D3C60_08360 PF14480 D3C60_08360 D3C60_08360 PF14579 Helix-hairpin-helix motif D3C60_08365 PF02576 Uncharacterised BCR, YhbC family COG0779 D3C60_08365 PF17384 D3C60_08365 D3C60_08370 PF00575 S1 RNA binding domain D3C60_08370 PF08529 NusA N-terminal domain D3C60_08370 PF13184 NusA-like KH domain D3C60_08375 PF04296 Protein of unknown function (DUF448) D3C60_08380 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family D3C60_08385 PF00009 Elongation factor Tu GTP binding domain D3C60_08385 PF04760 Translation initiation factor IF-2, N-terminal region D3C60_08385 PF11987 Translation-initiation factor 2 D3C60_08390 PF04456 Protein of unknown function (DUF503) D3C60_08395 PF02033 Ribosome-binding factor A D3C60_08400 PF01509 TruB family pseudouridylate synthase (N terminal domain) D3C60_08400 PF16198 D3C60_08400 D3C60_08405 PF01687 Riboflavin kinase D3C60_08405 PF06574 FAD synthetase D3C60_08410 PF00312 Ribosomal protein S15 D3C60_08415 PF00013 KH domain D3C60_08415 PF00575 S1 RNA binding domain D3C60_08415 PF01138 3' exoribonuclease family, domain 1 D3C60_08415 PF03725 3' exoribonuclease family, domain 2 D3C60_08415 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D3C60_08420 PF01522 Polysaccharide deacetylase D3C60_08420 PF12229 Putative peptidoglycan binding domain D3C60_08425 PF00675 Insulinase (Peptidase family M16) D3C60_08425 PF05193 Peptidase M16 inactive domain D3C60_08430 PF05239 PRC-barrel domain D3C60_08435 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3C60_08435 PF16924 D3C60_08435 D3C60_08440 PF02441 Flavoprotein D3C60_08445 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3C60_08445 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3C60_08450 PF00696 Amino acid kinase family D3C60_08450 PF13840 ACT domain D3C60_08455 PF00701 Dihydrodipicolinate synthetase family D3C60_08460 PF00753 Metallo-beta-lactamase superfamily D3C60_08460 PF07521 RNA-metabolising metallo-beta-lactamase D3C60_08465 PF00574 Clp protease D3C60_08470 PF14035 D3C60_08470 D3C60_08475 PF01580 FtsK/SpoIIIE family D3C60_08475 PF09397 Ftsk gamma domain D3C60_08480 PF00392 Bacterial regulatory proteins, gntR family D3C60_08480 PF07702 UTRA domain D3C60_08485 PF07690 Major Facilitator Superfamily D3C60_08490 PF01047 MarR family D3C60_08495 PF03176 MMPL family D3C60_08500 PF05193 Peptidase M16 inactive domain D3C60_08505 PF00675 Insulinase (Peptidase family M16) D3C60_08505 PF05193 Peptidase M16 inactive domain D3C60_08510 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_08515 PF11588 Protein of unknown function (DUF3243) D3C60_08520 PF11868 D3C60_08520 D3C60_08525 PF13413 Helix-turn-helix domain D3C60_08525 PF13464 D3C60_08525 D3C60_08530 PF01066 CDP-alcohol phosphatidyltransferase D3C60_08535 PF00994 Probable molybdopterin binding domain D3C60_08535 PF02464 Competence-damaged protein D3C60_08540 PF00154 recA bacterial DNA recombination protein D3C60_08545 PF00144 Beta-lactamase D3C60_08550 PF00013 KH domain D3C60_08550 PF01966 HD domain D3C60_08550 PF12072 D3C60_08550 D3C60_08555 PF13277 YmdB-like protein D3C60_08560 PF04232 Stage V sporulation protein S (SpoVS) D3C60_08565 PF00107 Zinc-binding dehydrogenase D3C60_08565 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_08570 PF00155 Aminotransferase class I and II D3C60_08575 PF00919 Uncharacterized protein family UPF0004 D3C60_08575 PF01938 TRAM domain D3C60_08575 PF04055 Radical SAM superfamily D3C60_08580 PF06133 Protein of unknown function (DUF964) D3C60_08585 PF10628 D3C60_08585 D3C60_08590 PF00488 MutS domain V D3C60_08590 PF01624 MutS domain I D3C60_08590 PF05188 MutS domain II D3C60_08590 PF05190 MutS family domain IV D3C60_08590 PF05192 MutS domain III D3C60_08595 PF01119 DNA mismatch repair protein, C-terminal domain D3C60_08595 PF08676 MutL C terminal dimerisation domain D3C60_08595 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_08600 PF00589 Phage integrase family D3C60_08630 PF00753 Metallo-beta-lactamase superfamily D3C60_08635 PF00698 Acyl transferase domain D3C60_08640 PF00698 Acyl transferase domain D3C60_08645 PF00698 Acyl transferase domain D3C60_08650 PF00550 Phosphopantetheine attachment site D3C60_08655 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal D3C60_08655 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal D3C60_08660 PF00378 Enoyl-CoA hydratase/isomerase family D3C60_08665 PF00378 Enoyl-CoA hydratase/isomerase family D3C60_08670 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_08670 PF00501 AMP-binding enzyme D3C60_08670 PF00550 Phosphopantetheine attachment site D3C60_08670 PF00668 Condensation domain D3C60_08670 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_08670 PF08659 KR domain D3C60_08670 PF13193 AMP-binding enzyme C-terminal domain D3C60_08670 PF14765 Polyketide synthase dehydratase D3C60_08670 PF16197 D3C60_08670 D3C60_08675 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_08675 PF00550 Phosphopantetheine attachment site D3C60_08675 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_08675 PF08659 KR domain D3C60_08675 PF14765 Polyketide synthase dehydratase D3C60_08675 PF16197 D3C60_08675 D3C60_08680 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_08680 PF00550 Phosphopantetheine attachment site D3C60_08680 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_08680 PF08242 Methyltransferase domain D3C60_08680 PF08659 KR domain D3C60_08680 PF14765 Polyketide synthase dehydratase D3C60_08680 PF16197 D3C60_08680 D3C60_08685 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_08685 PF00501 AMP-binding enzyme D3C60_08685 PF00550 Phosphopantetheine attachment site D3C60_08685 PF00668 Condensation domain D3C60_08685 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_08685 PF08659 KR domain D3C60_08685 PF13193 AMP-binding enzyme C-terminal domain D3C60_08685 PF14765 Polyketide synthase dehydratase D3C60_08685 PF16197 D3C60_08685 D3C60_08690 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_08690 PF00550 Phosphopantetheine attachment site D3C60_08690 PF00975 Thioesterase domain D3C60_08690 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_08690 PF08242 Methyltransferase domain D3C60_08690 PF14765 Polyketide synthase dehydratase D3C60_08690 PF16197 D3C60_08690 D3C60_08695 PF00067 Cytochrome P450 D3C60_08700 PF14040 D3C60_08700 D3C60_08705 PF06912 D3C60_08705 D3C60_08715 PF00082 Subtilase family D3C60_08725 PF05908 Protein of unknown function (DUF867) D3C60_08730 PF02566 OsmC-like protein D3C60_08735 PF00893 Small Multidrug Resistance protein D3C60_08740 PF00893 Small Multidrug Resistance protein D3C60_08750 PF12788 D3C60_08750 D3C60_08755 PF01715 IPP transferase D3C60_08760 PF17209 D3C60_08760 D3C60_08765 PF14157 YmzC-like protein D3C60_08775 PF07972 NrdI Flavodoxin like D3C60_08780 PF00317 Ribonucleotide reductase, all-alpha domain D3C60_08780 PF02867 Ribonucleotide reductase, barrel domain D3C60_08780 PF08343 Ribonucleotide reductase N-terminal D3C60_08785 PF00268 Ribonucleotide reductase, small chain D3C60_08795 PF01520 N-acetylmuramoyl-L-alanine amidase D3C60_08795 PF05036 Sporulation related domain D3C60_08805 PF00004 ATPase family associated with various cellular activities (AAA) D3C60_08810 PF01926 50S ribosome-binding GTPase D3C60_08810 PF13167 D3C60_08810 D3C60_08810 PF16360 D3C60_08810 D3C60_08815 PF06838 Methionine gamma-lyase D3C60_08820 PF13411 MerR HTH family regulatory protein D3C60_08825 PF00120 Glutamine synthetase, catalytic domain D3C60_08825 PF03951 Glutamine synthetase, beta-Grasp domain D3C60_08830 PF03022 Major royal jelly protein D3C60_08835 PF13347 MFS/sugar transport protein D3C60_08840 PF04616 Glycosyl hydrolases family 43 D3C60_08845 PF00480 ROK family D3C60_08845 PF13412 Winged helix-turn-helix DNA-binding D3C60_08850 PF01261 Xylose isomerase-like TIM barrel D3C60_08855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D3C60_08855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D3C60_08860 PF00391 PEP-utilising enzyme, mobile domain D3C60_08860 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D3C60_08870 PF09680 D3C60_08870 D3C60_08885 PF00107 Zinc-binding dehydrogenase D3C60_08885 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_08895 PF17094 D3C60_08895 D3C60_08900 PF00583 Acetyltransferase (GNAT) family D3C60_08900 PF14268 D3C60_08900 D3C60_08905 PF13302 Acetyltransferase (GNAT) domain D3C60_08915 PF13042 D3C60_08915 D3C60_08920 PF16302 D3C60_08920 D3C60_08930 PF13021 D3C60_08930 D3C60_08935 PF00296 Luciferase-like monooxygenase D3C60_08940 PF03067 Chitin binding domain D3C60_08945 PF09680 D3C60_08945 D3C60_08950 PF13302 Acetyltransferase (GNAT) domain D3C60_08960 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain D3C60_08960 PF12708 Pectate lyase superfamily protein D3C60_08965 PF00692 dUTPase D3C60_08975 PF05908 Protein of unknown function (DUF867) D3C60_08980 PF01145 SPFH domain / Band 7 family D3C60_08985 PF10710 D3C60_08985 D3C60_08995 PF00717 Peptidase S24-like D3C60_08995 PF01726 LexA DNA binding domain D3C60_09000 PF01476 LysM domain D3C60_09005 PF00239 Resolvase, N terminal domain D3C60_09010 PF05979 Bacterial protein of unknown function (DUF896) D3C60_09015 PF00456 Transketolase, thiamine diphosphate binding domain D3C60_09015 PF02779 Transketolase, pyrimidine binding domain D3C60_09015 PF02780 Transketolase, C-terminal domain D3C60_09020 PF10747 Protein of unknown function (DUF2522) D3C60_09025 PF03672 D3C60_09025 D3C60_09030 PF09388 Spo0E like sporulation regulatory protein D3C60_09035 PF02683 D3C60_09035 D3C60_09040 PF00072 Response regulator receiver domain D3C60_09045 PF07301 D3C60_09045 D3C60_09050 PF11084 D3C60_09050 D3C60_09060 PF08179 D3C60_09060 D3C60_09065 PF08175 D3C60_09065 D3C60_09070 PF00330 Aconitase family (aconitate hydratase) D3C60_09070 PF00694 Aconitase C-terminal domain D3C60_09075 PF00578 AhpC/TSA family D3C60_09080 PF13040 D3C60_09080 D3C60_09085 PF08177 D3C60_09085 D3C60_09095 PF03061 Thioesterase superfamily D3C60_09110 PF02660 D3C60_09110 D3C60_09115 PF13380 CoA binding domain D3C60_09120 PF00204 DNA gyrase B D3C60_09120 PF00986 DNA gyrase B subunit, carboxyl terminus D3C60_09120 PF01751 Toprim domain D3C60_09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_09125 PF00521 DNA gyrase/topoisomerase IV, subunit A D3C60_09125 PF03989 DNA gyrase C-terminal domain, beta-propeller D3C60_09135 PF01235 D3C60_09135 D3C60_09140 PF00294 pfkB family carbohydrate kinase D3C60_09145 PF00107 Zinc-binding dehydrogenase D3C60_09145 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_09150 PF01081 KDPG and KHG aldolase D3C60_09155 PF03786 D-mannonate dehydratase (UxuA) D3C60_09160 PF00106 short chain dehydrogenase D3C60_09165 PF00356 Bacterial regulatory proteins, lacI family D3C60_09165 PF13377 Periplasmic binding protein-like domain D3C60_09170 PF07690 Major Facilitator Superfamily D3C60_09180 PF13761 D3C60_09180 D3C60_09185 PF14158 D3C60_09185 D3C60_09200 PF03403 Platelet-activating factor acetylhydrolase, isoform II D3C60_09205 PF00150 Cellulase (glycosyl hydrolase family 5) D3C60_09205 PF00942 Cellulose binding domain D3C60_09210 PF09685 D3C60_09210 D3C60_09215 PF00512 His Kinase A (phospho-acceptor) domain D3C60_09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_09220 PF00072 Response regulator receiver domain D3C60_09220 PF00486 Transcriptional regulatory protein, C terminal D3C60_09225 PF02055 O-Glycosyl hydrolase family 30 D3C60_09225 PF17189 D3C60_09225 D3C60_09230 PF03422 Carbohydrate binding module (family 6) D3C60_09230 PF04616 Glycosyl hydrolases family 43 D3C60_09235 PF00501 AMP-binding enzyme D3C60_09235 PF00550 Phosphopantetheine attachment site D3C60_09235 PF00668 Condensation domain D3C60_09235 PF00975 Thioesterase domain D3C60_09235 PF13193 AMP-binding enzyme C-terminal domain D3C60_09240 PF00501 AMP-binding enzyme D3C60_09240 PF00550 Phosphopantetheine attachment site D3C60_09240 PF00668 Condensation domain D3C60_09240 PF13193 AMP-binding enzyme C-terminal domain D3C60_09245 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_09245 PF00202 Aminotransferase class-III D3C60_09245 PF00501 AMP-binding enzyme D3C60_09245 PF00550 Phosphopantetheine attachment site D3C60_09245 PF00668 Condensation domain D3C60_09245 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_09245 PF13193 AMP-binding enzyme C-terminal domain D3C60_09245 PF16197 D3C60_09245 D3C60_09250 PF00698 Acyl transferase domain D3C60_09255 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_09260 PF01144 Coenzyme A transferase D3C60_09265 PF01144 Coenzyme A transferase D3C60_09270 PF02447 D3C60_09270 D3C60_09275 PF00067 Cytochrome P450 D3C60_09280 PF04055 Radical SAM superfamily D3C60_09280 PF06968 Biotin and Thiamin Synthesis associated domain D3C60_09285 PF13500 AAA domain D3C60_09290 PF00155 Aminotransferase class I and II D3C60_09295 PF00202 Aminotransferase class-III D3C60_09300 PF03744 D3C60_09300 D3C60_09305 PF04138 D3C60_09305 D3C60_09310 PF00483 Nucleotidyl transferase D3C60_09315 PF09335 D3C60_09315 D3C60_09320 PF01039 Carboxyl transferase domain D3C60_09325 PF00378 Enoyl-CoA hydratase/isomerase family D3C60_09330 PF00682 HMGL-like D3C60_09335 PF00364 Biotin-requiring enzyme D3C60_09340 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain D3C60_09340 PF02785 Biotin carboxylase C-terminal domain D3C60_09340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3C60_09345 PF00501 AMP-binding enzyme D3C60_09345 PF13193 AMP-binding enzyme C-terminal domain D3C60_09350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3C60_09350 PF02770 Acyl-CoA dehydrogenase, middle domain D3C60_09350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3C60_09355 PF02638 D3C60_09355 D3C60_09360 PF07098 D3C60_09360 D3C60_09365 PF00501 AMP-binding enzyme D3C60_09365 PF00550 Phosphopantetheine attachment site D3C60_09365 PF00668 Condensation domain D3C60_09365 PF00975 Thioesterase domain D3C60_09365 PF13193 AMP-binding enzyme C-terminal domain D3C60_09370 PF00501 AMP-binding enzyme D3C60_09370 PF00550 Phosphopantetheine attachment site D3C60_09370 PF00668 Condensation domain D3C60_09370 PF13193 AMP-binding enzyme C-terminal domain D3C60_09375 PF00501 AMP-binding enzyme D3C60_09375 PF00550 Phosphopantetheine attachment site D3C60_09375 PF00668 Condensation domain D3C60_09375 PF13193 AMP-binding enzyme C-terminal domain D3C60_09380 PF00501 AMP-binding enzyme D3C60_09380 PF00550 Phosphopantetheine attachment site D3C60_09380 PF00668 Condensation domain D3C60_09380 PF13193 AMP-binding enzyme C-terminal domain D3C60_09385 PF00501 AMP-binding enzyme D3C60_09385 PF00550 Phosphopantetheine attachment site D3C60_09385 PF00668 Condensation domain D3C60_09385 PF13193 AMP-binding enzyme C-terminal domain D3C60_09395 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D3C60_09400 PF01263 Aldose 1-epimerase D3C60_09405 PF01554 MatE D3C60_09410 PF16800 D3C60_09410 D3C60_09420 PF00589 Phage integrase family D3C60_09425 PF12728 Helix-turn-helix domain D3C60_09430 PF01019 Gamma-glutamyltranspeptidase D3C60_09435 PF07690 Major Facilitator Superfamily D3C60_09440 PF12840 Helix-turn-helix domain D3C60_09445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3C60_09445 PF02824 TGS domain D3C60_09445 PF03129 Anticodon binding domain D3C60_09445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3C60_09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_09455 PF03466 LysR substrate binding domain D3C60_09460 PF00107 Zinc-binding dehydrogenase D3C60_09460 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_09470 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_09470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D3C60_09475 PF00310 Glutamine amidotransferases class-II D3C60_09475 PF01493 GXGXG motif D3C60_09475 PF01645 Conserved region in glutamate synthase D3C60_09475 PF04898 Glutamate synthase central domain D3C60_09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_09480 PF03466 LysR substrate binding domain D3C60_09485 PF00696 Amino acid kinase family D3C60_09485 PF01472 PUA domain D3C60_09490 PF03807 NADP oxidoreductase coenzyme F420-dependent D3C60_09490 PF14748 Pyrroline-5-carboxylate reductase dimerisation D3C60_09495 PF02334 Replication terminator protein D3C60_09500 PF00106 short chain dehydrogenase D3C60_09515 PF07690 Major Facilitator Superfamily D3C60_09520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D3C60_09520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D3C60_09525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3C60_09525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3C60_09530 PF00384 Molybdopterin oxidoreductase D3C60_09530 PF01568 Molydopterin dinucleotide binding domain D3C60_09530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3C60_09545 PF12802 MarR family D3C60_09555 PF14567 SMI1-KNR4 cell-wall D3C60_09565 PF00589 Phage integrase family D3C60_09565 PF14657 D3C60_09565 D3C60_09565 PF14659 Phage integrase, N-terminal SAM-like domain D3C60_09590 PF13443 Cro/C1-type HTH DNA-binding domain D3C60_09610 PF07252 Protein of unknown function (DUF1433) D3C60_09620 PF13539 D-alanyl-D-alanine carboxypeptidase D3C60_09625 PF05105 D3C60_09625 D3C60_09630 PF09693 D3C60_09630 D3C60_09640 PF10651 Domain of unknown function (DUF2479) D3C60_09645 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain D3C60_09645 PF12708 Pectate lyase superfamily protein D3C60_09650 PF06605 Prophage endopeptidase tail D3C60_09655 PF05709 Phage tail protein D3C60_09660 PF01464 Transglycosylase SLT domain D3C60_09660 PF10145 D3C60_09660 D3C60_09675 PF04630 D3C60_09675 D3C60_09680 PF11367 Protein of unknown function (DUF3168) D3C60_09685 PF04883 D3C60_09685 D3C60_09690 PF05521 Phage head-tail joining protein D3C60_09695 PF05135 Phage gp6-like head-tail connector protein D3C60_09700 PF05065 Phage capsid family D3C60_09705 PF04586 D3C60_09705 D3C60_09710 PF04860 Phage portal protein D3C60_09720 PF03354 D3C60_09720 D3C60_09725 PF05119 D3C60_09725 D3C60_09785 PF01381 Helix-turn-helix D3C60_09790 PF01588 Putative tRNA binding domain D3C60_09795 PF07883 Cupin domain D3C60_09795 PF12833 Helix-turn-helix domain D3C60_09800 PF00440 Bacterial regulatory proteins, tetR family D3C60_09800 PF13305 WHG domain D3C60_09805 PF00753 Metallo-beta-lactamase superfamily D3C60_09815 PF01022 Bacterial regulatory protein, arsR family D3C60_09820 PF13702 Lysozyme-like D3C60_09825 PF04238 D3C60_09825 D3C60_09840 PF02016 LD-carboxypeptidase D3C60_09850 PF01476 LysM domain D3C60_09850 PF06725 3D domain D3C60_09855 PF00270 DEAD/DEAH box helicase D3C60_09855 PF00271 Helicase conserved C-terminal domain D3C60_09855 PF00570 HRDC domain D3C60_09855 PF09382 RQC domain D3C60_09855 PF16124 D3C60_09855 D3C60_09865 PF02525 Flavodoxin-like fold D3C60_09870 PF01258 Prokaryotic dksA/traR C4-type zinc finger D3C60_09875 PF10737 D3C60_09875 D3C60_09885 PF00011 Hsp20/alpha crystallin family D3C60_09900 PF08000 Bacterial PH domain D3C60_09905 PF13217 D3C60_09905 D3C60_09915 PF00171 Aldehyde dehydrogenase family D3C60_09920 PF13243 Prenyltransferase-like D3C60_09920 PF13249 Prenyltransferase-like D3C60_09925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D3C60_09925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D3C60_09930 PF00209 Sodium:neurotransmitter symporter family D3C60_09935 PF01758 Sodium Bile acid symporter family D3C60_09940 PF00753 Metallo-beta-lactamase superfamily D3C60_09945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3C60_09945 PF00364 Biotin-requiring enzyme D3C60_09945 PF02817 e3 binding domain D3C60_09950 PF00676 Dehydrogenase E1 component D3C60_09950 PF02779 Transketolase, pyrimidine binding domain D3C60_09950 PF16870 D3C60_09950 D3C60_09955 PF00092 von Willebrand factor type A domain D3C60_09960 PF07728 AAA domain (dynein-related subfamily) D3C60_09965 PF00080 Copper/zinc superoxide dismutase (SODC) D3C60_09970 PF00877 NlpC/P60 family D3C60_09970 PF01476 LysM domain D3C60_09975 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase D3C60_09980 PF02457 DisA bacterial checkpoint controller nucleotide-binding D3C60_09980 PF10372 Bacterial membrane-spanning protein N-terminus D3C60_09985 PF01554 MatE D3C60_09990 PF01740 STAS domain D3C60_09995 PF02585 GlcNAc-PI de-N-acetylase D3C60_10000 PF08830 Protein of unknown function (DUF1806) D3C60_10010 PF00892 EamA-like transporter family D3C60_10025 PF14552 Tautomerase enzyme D3C60_10035 PF01638 HxlR-like helix-turn-helix D3C60_10040 PF00881 Nitroreductase family D3C60_10045 PF01738 Dienelactone hydrolase family D3C60_10050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_10055 PF11755 D3C60_10055 D3C60_10060 PF00474 Sodium:solute symporter family D3C60_10065 PF02055 O-Glycosyl hydrolase family 30 D3C60_10065 PF17189 D3C60_10065 D3C60_10070 PF00232 Glycosyl hydrolase family 1 D3C60_10075 PF00392 Bacterial regulatory proteins, gntR family D3C60_10075 PF07702 UTRA domain D3C60_10080 PF00595 PDZ domain (Also known as DHR or GLGF) D3C60_10080 PF01471 Putative peptidoglycan binding domain D3C60_10080 PF03572 Peptidase family S41 D3C60_10085 PF08241 Methyltransferase domain D3C60_10095 PF02557 D-alanyl-D-alanine carboxypeptidase D3C60_10100 PF01048 Phosphorylase superfamily D3C60_10110 PF14191 D3C60_10110 D3C60_10115 PF01569 PAP2 superfamily D3C60_10120 PF14162 D3C60_10120 D3C60_10135 PF06855 Protein of unknown function (DUF1250) D3C60_10140 PF14122 D3C60_10140 D3C60_10145 PF12544 Lysine-2,3-aminomutase D3C60_10150 PF00583 Acetyltransferase (GNAT) family D3C60_10155 PF01546 Peptidase family M20/M25/M40 D3C60_10155 PF07687 Peptidase dimerisation domain D3C60_10160 PF01144 Coenzyme A transferase D3C60_10165 PF01144 Coenzyme A transferase D3C60_10170 PF00202 Aminotransferase class-III D3C60_10180 PF09680 D3C60_10180 D3C60_10185 PF00583 Acetyltransferase (GNAT) family D3C60_10190 PF00535 Glycosyl transferase family 2 D3C60_10205 PF12996 D3C60_10205 D3C60_10205 PF13524 Glycosyl transferases group 1 D3C60_10210 PF02333 Phytase D3C60_10215 PF02719 Polysaccharide biosynthesis protein D3C60_10230 PF11518 Protein of unknown function (DUF3221) D3C60_10240 PF14037 D3C60_10240 D3C60_10250 PF13424 Tetratricopeptide repeat D3C60_10265 PF14568 SMI1-KNR4 cell-wall D3C60_10270 PF04740 D3C60_10270 D3C60_10270 PF14414 D3C60_10270 D3C60_10275 PF09346 SMI1 / KNR4 family (SUKH-1) D3C60_10280 PF00565 Staphylococcal nuclease homologue D3C60_10280 PF05901 D3C60_10280 D3C60_10285 PF00239 Resolvase, N terminal domain D3C60_10285 PF07508 Recombinase D3C60_10290 PF02719 Polysaccharide biosynthesis protein D3C60_10295 PF01641 SelR domain D3C60_10300 PF01625 Peptide methionine sulfoxide reductase D3C60_10305 PF01047 MarR family D3C60_10310 PF09911 D3C60_10310 D3C60_10315 PF13472 GDSL-like Lipase/Acylhydrolase family D3C60_10320 PF02630 SCO1/SenC D3C60_10325 PF10751 D3C60_10325 D3C60_10330 PF00291 Pyridoxal-phosphate dependent enzyme D3C60_10330 PF00585 C-terminal regulatory domain of Threonine dehydratase D3C60_10335 PF00158 Sigma-54 interaction domain D3C60_10340 PF03006 D3C60_10340 D3C60_10350 PF00186 Dihydrofolate reductase D3C60_10355 PF00303 Thymidylate synthase D3C60_10360 PF14005 D3C60_10360 D3C60_10365 PF04445 Putative SAM-dependent methyltransferase D3C60_10370 PF06491 Disulphide isomerase D3C60_10375 PF00920 Dehydratase family D3C60_10380 PF08712 Scaffold protein Nfu/NifU N terminal D3C60_10380 PF13646 HEAT repeats D3C60_10380 PF13769 D3C60_10380 D3C60_10385 PF01966 HD domain D3C60_10390 PF00255 Glutathione peroxidase D3C60_10395 PF04204 Homoserine O-succinyltransferase D3C60_10400 PF00534 Glycosyl transferases group 1 D3C60_10400 PF06925 D3C60_10400 D3C60_10405 PF00313 'Cold-shock' DNA-binding domain D3C60_10415 PF10819 D3C60_10415 D3C60_10420 PF10782 D3C60_10420 D3C60_10425 PF13456 Reverse transcriptase-like D3C60_10430 PF02592 D3C60_10430 D3C60_10435 PF13456 Reverse transcriptase-like D3C60_10445 PF01367 5'-3' exonuclease, C-terminal SAM fold D3C60_10445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D3C60_10455 PF10752 D3C60_10455 D3C60_10460 PF00350 Dynamin family D3C60_10470 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D3C60_10475 PF00195 Chalcone and stilbene synthases, N-terminal domain D3C60_10475 PF02797 Chalcone and stilbene synthases, C-terminal domain D3C60_10480 PF13302 Acetyltransferase (GNAT) domain D3C60_10485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3C60_10500 PF00857 Isochorismatase family D3C60_10510 PF00860 Permease family D3C60_10515 PF00156 Phosphoribosyl transferase domain D3C60_10520 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D3C60_10525 PF13307 Helicase C-terminal domain D3C60_10535 PF14139 D3C60_10535 D3C60_10540 PF01170 Putative RNA methylase family UPF0020 D3C60_10540 PF02926 THUMP domain D3C60_10550 PF05103 DivIVA protein D3C60_10555 PF06908 Protein of unknown function (DUF1273) D3C60_10560 PF11122 D3C60_10560 D3C60_10565 PF13482 RNase_H superfamily D3C60_10570 PF00270 DEAD/DEAH box helicase D3C60_10570 PF00271 Helicase conserved C-terminal domain D3C60_10570 PF09369 D3C60_10570 D3C60_10575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D3C60_10585 PF14179 D3C60_10585 D3C60_10590 PF14178 D3C60_10590 D3C60_10595 PF08807 Bacterial domain of unknown function (DUF1798) D3C60_10600 PF17522 D3C60_10600 D3C60_10610 PF10720 D3C60_10610 D3C60_10615 PF03838 Recombination protein U D3C60_10620 PF00905 Penicillin binding protein transpeptidase domain D3C60_10620 PF00912 Transglycosylase D3C60_10630 PF00633 Helix-hairpin-helix motif D3C60_10630 PF00730 HhH-GPD superfamily base excision DNA repair protein D3C60_10635 PF07261 Replication initiation and membrane attachment D3C60_10640 PF00152 tRNA synthetases class II (D, K and N) D3C60_10640 PF01336 OB-fold nucleic acid binding domain D3C60_10645 PF00155 Aminotransferase class I and II D3C60_10655 PF14084 D3C60_10655 D3C60_10660 PF00929 Exonuclease D3C60_10660 PF04851 Type III restriction enzyme, res subunit D3C60_10660 PF13307 Helicase C-terminal domain D3C60_10665 PF02261 Aspartate decarboxylase D3C60_10670 PF02569 Pantoate-beta-alanine ligase D3C60_10675 PF02548 Ketopantoate hydroxymethyltransferase D3C60_10680 PF02237 Biotin protein ligase C terminal domain D3C60_10680 PF03099 Biotin/lipoate A/B protein ligase family D3C60_10680 PF08279 HTH domain D3C60_10685 PF01743 Poly A polymerase head domain D3C60_10685 PF12627 Probable RNA and SrmB- binding site of polymerase A D3C60_10685 PF13735 tRNA nucleotidyltransferase domain 2 putative D3C60_10690 PF00534 Glycosyl transferases group 1 D3C60_10690 PF13439 Glycosyltransferase Family 4 D3C60_10695 PF02585 GlcNAc-PI de-N-acetylase D3C60_10700 PF02142 MGS-like domain D3C60_10705 PF01113 Dihydrodipicolinate reductase, N-terminus D3C60_10705 PF05173 Dihydrodipicolinate reductase, C-terminus D3C60_10710 PF03819 MazG nucleotide pyrophosphohydrolase domain D3C60_10715 PF02588 D3C60_10715 D3C60_10715 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D3C60_10720 PF00190 Cupin D3C60_10725 PF09577 D3C60_10725 D3C60_10730 PF07187 D3C60_10730 D3C60_10735 PF00032 Cytochrome b(C-terminal)/b6/petD D3C60_10735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3C60_10740 PF00033 Cytochrome b(N-terminal)/b6/petB D3C60_10745 PF00355 Rieske [2Fe-2S] domain D3C60_10745 PF08802 Cytochrome B6-F complex Fe-S subunit D3C60_10750 PF10673 D3C60_10750 D3C60_10755 PF08858 IDEAL domain D3C60_10755 PF08864 UPF0302 domain D3C60_10760 PF13429 Tetratricopeptide repeat D3C60_10760 PF13432 Tetratricopeptide repeat D3C60_10760 PF14559 Tetratricopeptide repeat D3C60_10765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D3C60_10770 PF01842 ACT domain D3C60_10770 PF02153 Prephenate dehydrogenase D3C60_10775 PF00155 Aminotransferase class I and II D3C60_10780 PF00290 Tryptophan synthase alpha chain D3C60_10785 PF00291 Pyridoxal-phosphate dependent enzyme D3C60_10790 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D3C60_10795 PF00218 Indole-3-glycerol phosphate synthase D3C60_10800 PF00591 Glycosyl transferase family, a/b domain D3C60_10800 PF02885 Glycosyl transferase family, helical bundle domain D3C60_10805 PF00425 chorismate binding enzyme D3C60_10805 PF04715 Anthranilate synthase component I, N terminal region D3C60_10810 PF07736 Chorismate mutase type I D3C60_10815 PF01761 3-dehydroquinate synthase D3C60_10820 PF01264 Chorismate synthase D3C60_10825 PF01739 CheR methyltransferase, SAM binding domain D3C60_10825 PF03705 CheR methyltransferase, all-alpha domain D3C60_10830 PF00334 Nucleoside diphosphate kinase D3C60_10835 PF00348 Polyprenyl synthetase D3C60_10840 PF01209 ubiE/COQ5 methyltransferase family D3C60_10845 PF07307 D3C60_10845 D3C60_10850 PF02081 Tryptophan RNA-binding attenuator protein D3C60_10855 PF01227 GTP cyclohydrolase I D3C60_10860 PF00216 Bacterial DNA-binding protein D3C60_10865 PF09547 D3C60_10865 D3C60_10875 PF10966 D3C60_10875 D3C60_10880 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D3C60_10880 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D3C60_10885 PF01926 50S ribosome-binding GTPase D3C60_10885 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D3C60_10895 PF14140 D3C60_10895 D3C60_10900 PF01070 FMN-dependent dehydrogenase D3C60_10905 PF00575 S1 RNA binding domain D3C60_10910 PF02224 Cytidylate kinase D3C60_10915 PF07238 PilZ domain D3C60_10915 PF12945 Flagellar protein YcgR D3C60_10920 PF03413 Peptidase propeptide and YPEB domain D3C60_10920 PF14620 D3C60_10920 D3C60_10925 PF01471 Putative peptidoglycan binding domain D3C60_10925 PF07486 Cell Wall Hydrolase D3C60_10930 PF13367 D3C60_10930 D3C60_10935 PF13738 Pyridine nucleotide-disulphide oxidoreductase D3C60_10940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3C60_10940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D3C60_10945 PF05389 Negative regulator of genetic competence (MecA) D3C60_10950 PF12850 Calcineurin-like phosphoesterase superfamily domain D3C60_10955 PF10864 D3C60_10955 D3C60_10960 PF01476 LysM domain D3C60_10965 PF02517 CAAX protease self-immunity D3C60_10970 PF00270 DEAD/DEAH box helicase D3C60_10970 PF00271 Helicase conserved C-terminal domain D3C60_10975 PF14493 D3C60_10975 D3C60_10980 PF13370 4Fe-4S single cluster domain D3C60_10985 PF12822 Protein of unknown function (DUF3816) D3C60_10990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3C60_10990 PF01842 ACT domain D3C60_10990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3C60_11000 PF04542 Sigma-70 region 2 D3C60_11000 PF08281 Sigma-70, region 4 D3C60_11005 PF00512 His Kinase A (phospho-acceptor) domain D3C60_11005 PF00672 HAMP domain D3C60_11005 PF00989 PAS fold D3C60_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_11010 PF00072 Response regulator receiver domain D3C60_11010 PF00486 Transcriptional regulatory protein, C terminal D3C60_11015 PF01578 D3C60_11015 D3C60_11020 PF05140 D3C60_11020 D3C60_11025 PF00578 AhpC/TSA family D3C60_11030 PF00849 RNA pseudouridylate synthase D3C60_11030 PF01479 S4 domain D3C60_11035 PF07670 Nucleoside recognition D3C60_11040 PF07670 Nucleoside recognition D3C60_11045 PF00768 D-alanyl-D-alanine carboxypeptidase D3C60_11045 PF07943 Penicillin-binding protein 5, C-terminal domain D3C60_11050 PF13047 D3C60_11050 D3C60_11055 PF04079 Putative transcriptional regulators (Ypuh-like) D3C60_11060 PF02616 ScpA/B protein D3C60_11065 PF09680 D3C60_11065 D3C60_11070 PF03745 Domain of unknown function (DUF309) D3C60_11080 PF00583 Acetyltransferase (GNAT) family D3C60_11085 PF00885 6,7-dimethyl-8-ribityllumazine synthase D3C60_11090 PF00925 GTP cyclohydrolase II D3C60_11090 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D3C60_11095 PF00677 Lumazine binding domain D3C60_11100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3C60_11100 PF01872 RibD C-terminal domain D3C60_11110 PF00717 Peptidase S24-like D3C60_11115 PF07301 D3C60_11115 D3C60_11120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D3C60_11125 PF06207 D3C60_11125 D3C60_11130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D3C60_11130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D3C60_11135 PF03323 D3C60_11135 D3C60_11140 PF14097 D3C60_11140 D3C60_11145 PF03862 D3C60_11145 D3C60_11150 PF07451 Stage V sporulation protein AD (SpoVAD) D3C60_11155 PF03862 D3C60_11155 D3C60_11160 PF13782 D3C60_11160 D3C60_11165 PF12164 Stage V sporulation protein AA D3C60_11170 PF04539 Sigma-70 region 3 D3C60_11170 PF04542 Sigma-70 region 2 D3C60_11170 PF04545 Sigma-70, region 4 D3C60_11175 PF13581 Histidine kinase-like ATPase domain D3C60_11180 PF01740 STAS domain D3C60_11185 PF00768 D-alanyl-D-alanine carboxypeptidase D3C60_11185 PF07943 Penicillin-binding protein 5, C-terminal domain D3C60_11190 PF01048 Phosphorylase superfamily D3C60_11195 PF01676 Metalloenzyme superfamily D3C60_11200 PF00589 Phage integrase family D3C60_11200 PF02899 Phage integrase, N-terminal SAM-like domain D3C60_11205 PF14004 D3C60_11205 D3C60_11210 PF01475 Ferric uptake regulator family D3C60_11215 PF01944 D3C60_11215 D3C60_11230 PF00390 Malic enzyme, N-terminal domain D3C60_11230 PF01488 Shikimate / quinate 5-dehydrogenase D3C60_11230 PF03949 Malic enzyme, NAD binding domain D3C60_11235 PF03553 D3C60_11235 D3C60_11240 PF00206 Lyase D3C60_11240 PF10415 Fumarase C C-terminus D3C60_11245 PF00710 Asparaginase D3C60_11250 PF01381 Helix-turn-helix D3C60_11255 PF13263 PHP-associated D3C60_11260 PF00293 NUDIX domain D3C60_11265 PF13072 D3C60_11265 D3C60_11270 PF00248 Aldo/keto reductase family D3C60_11275 PF13025 D3C60_11275 D3C60_11280 PF12146 Putative lysophospholipase D3C60_11285 PF10827 D3C60_11285 D3C60_11290 PF01521 Iron-sulphur cluster biosynthesis D3C60_11295 PF04229 GrpB protein D3C60_11295 PF13673 Acetyltransferase (GNAT) domain D3C60_11300 PF03992 Antibiotic biosynthesis monooxygenase D3C60_11305 PF00583 Acetyltransferase (GNAT) family D3C60_11310 PF00817 impB/mucB/samB family D3C60_11310 PF11798 IMS family HHH motif D3C60_11310 PF11799 impB/mucB/samB family C-terminal domain D3C60_11315 PF08863 D3C60_11315 D3C60_11320 PF14164 D3C60_11320 D3C60_11325 PF01594 D3C60_11325 D3C60_11330 PF13314 D3C60_11330 D3C60_11335 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_11340 PF00485 Phosphoribulokinase / Uridine kinase family D3C60_11345 PF00291 Pyridoxal-phosphate dependent enzyme D3C60_11350 PF00106 short chain dehydrogenase D3C60_11355 PF00753 Metallo-beta-lactamase superfamily D3C60_11360 PF03807 NADP oxidoreductase coenzyme F420-dependent D3C60_11360 PF14748 Pyrroline-5-carboxylate reductase dimerisation D3C60_11365 PF00378 Enoyl-CoA hydratase/isomerase family D3C60_11370 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal D3C60_11370 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal D3C60_11375 PF00067 Cytochrome P450 D3C60_11380 PF00107 Zinc-binding dehydrogenase D3C60_11380 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_11380 PF00550 Phosphopantetheine attachment site D3C60_11380 PF00975 Thioesterase domain D3C60_11380 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_11380 PF08240 Alcohol dehydrogenase GroES-like domain D3C60_11380 PF08242 Methyltransferase domain D3C60_11380 PF16197 D3C60_11380 D3C60_11385 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_11385 PF00550 Phosphopantetheine attachment site D3C60_11385 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_11385 PF08659 KR domain D3C60_11385 PF14765 Polyketide synthase dehydratase D3C60_11385 PF16197 D3C60_11385 D3C60_11390 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_11390 PF00550 Phosphopantetheine attachment site D3C60_11390 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_11390 PF08659 KR domain D3C60_11390 PF14765 Polyketide synthase dehydratase D3C60_11390 PF16197 D3C60_11390 D3C60_11395 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_11395 PF00550 Phosphopantetheine attachment site D3C60_11395 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_11395 PF08242 Methyltransferase domain D3C60_11395 PF08659 KR domain D3C60_11395 PF14765 Polyketide synthase dehydratase D3C60_11395 PF16197 D3C60_11395 D3C60_11400 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_11400 PF00550 Phosphopantetheine attachment site D3C60_11400 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_11400 PF08659 KR domain D3C60_11400 PF14765 Polyketide synthase dehydratase D3C60_11400 PF16197 D3C60_11400 D3C60_11405 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_11405 PF00550 Phosphopantetheine attachment site D3C60_11405 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_11405 PF08659 KR domain D3C60_11405 PF14765 Polyketide synthase dehydratase D3C60_11405 PF16197 D3C60_11405 D3C60_11410 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_11410 PF00550 Phosphopantetheine attachment site D3C60_11410 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_11410 PF08242 Methyltransferase domain D3C60_11410 PF08659 KR domain D3C60_11410 PF14765 Polyketide synthase dehydratase D3C60_11410 PF16197 D3C60_11410 D3C60_11415 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_11420 PF00501 AMP-binding enzyme D3C60_11420 PF13193 AMP-binding enzyme C-terminal domain D3C60_11435 PF00698 Acyl transferase domain D3C60_11435 PF03060 Nitronate monooxygenase D3C60_11445 PF02357 Transcription termination factor nusG D3C60_11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_11455 PF03466 LysR substrate binding domain D3C60_11465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3C60_11470 PF00561 alpha/beta hydrolase fold D3C60_11475 PF00471 Ribosomal protein L33 D3C60_11480 PF12706 Beta-lactamase superfamily domain D3C60_11485 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D3C60_11485 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D3C60_11490 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D3C60_11490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3C60_11495 PF00817 impB/mucB/samB family D3C60_11495 PF11798 IMS family HHH motif D3C60_11495 PF11799 impB/mucB/samB family C-terminal domain D3C60_11505 PF02096 60Kd inner membrane protein D3C60_11510 PF01546 Peptidase family M20/M25/M40 D3C60_11510 PF07687 Peptidase dimerisation domain D3C60_11515 PF01039 Carboxyl transferase domain D3C60_11520 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_11525 PF03734 L,D-transpeptidase catalytic domain D3C60_11530 PF06081 D3C60_11530 D3C60_11530 PF11728 DUF939 C-terminal domain D3C60_11535 PF00005 ABC transporter D3C60_11540 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_11545 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3C60_11550 PF06491 Disulphide isomerase D3C60_11555 PF00781 Diacylglycerol kinase catalytic domain D3C60_11560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3C60_11560 PF00364 Biotin-requiring enzyme D3C60_11560 PF02817 e3 binding domain D3C60_11565 PF02779 Transketolase, pyrimidine binding domain D3C60_11565 PF02780 Transketolase, C-terminal domain D3C60_11570 PF00676 Dehydrogenase E1 component D3C60_11575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3C60_11575 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_11580 PF00871 Acetokinase family D3C60_11585 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3C60_11585 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D3C60_11590 PF01515 Phosphate acetyl/butaryl transferase D3C60_11595 PF00158 Sigma-54 interaction domain D3C60_11595 PF00989 PAS fold D3C60_11595 PF02954 Bacterial regulatory protein, Fis family D3C60_11600 PF11118 D3C60_11600 D3C60_11605 PF13714 Phosphoenolpyruvate phosphomutase D3C60_11610 PF03972 MmgE/PrpD family D3C60_11615 PF00285 Citrate synthase D3C60_11620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3C60_11620 PF02770 Acyl-CoA dehydrogenase, middle domain D3C60_11620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3C60_11625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3C60_11625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3C60_11630 PF00108 Thiolase, N-terminal domain D3C60_11630 PF02803 Thiolase, C-terminal domain D3C60_11635 PF03009 Glycerophosphoryl diester phosphodiesterase family D3C60_11640 PF01520 N-acetylmuramoyl-L-alanine amidase D3C60_11650 PF02659 D3C60_11650 D3C60_11655 PF01381 Helix-turn-helix D3C60_11655 PF06803 D3C60_11655 D3C60_11660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3C60_11665 PF10676 D3C60_11665 D3C60_11670 PF10676 D3C60_11670 D3C60_11675 PF00842 Alanine racemase, C-terminal domain D3C60_11675 PF01168 Alanine racemase, N-terminal domain D3C60_11685 PF00072 Response regulator receiver domain D3C60_11685 PF08769 Sporulation initiation factor Spo0A C terminal D3C60_11690 PF05580 D3C60_11690 D3C60_11690 PF13180 PDZ domain D3C60_11695 PF13476 AAA domain D3C60_11700 PF01316 Arginine repressor, DNA binding domain D3C60_11700 PF02863 Arginine repressor, C-terminal domain D3C60_11705 PF01479 S4 domain D3C60_11705 PF01728 FtsJ-like methyltransferase D3C60_11710 PF02779 Transketolase, pyrimidine binding domain D3C60_11710 PF02780 Transketolase, C-terminal domain D3C60_11710 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D3C60_11715 PF00348 Polyprenyl synthetase D3C60_11720 PF02609 Exonuclease VII small subunit D3C60_11725 PF02601 D3C60_11725 D3C60_11725 PF13742 D3C60_11725 D3C60_11730 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D3C60_11730 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D3C60_11735 PF01029 NusB family D3C60_11740 PF03780 D3C60_11740 D3C60_11745 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain D3C60_11745 PF02785 Biotin carboxylase C-terminal domain D3C60_11745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3C60_11750 PF00364 Biotin-requiring enzyme D3C60_11755 PF12685 SpoIIIAH-like protein D3C60_11765 PF09581 D3C60_11765 D3C60_11770 PF09546 D3C60_11770 D3C60_11775 PF06686 D3C60_11775 D3C60_11780 PF06686 D3C60_11780 D3C60_11785 PF09548 D3C60_11785 D3C60_11790 PF00004 ATPase family associated with various cellular activities (AAA) D3C60_11795 PF10942 D3C60_11795 D3C60_11800 PF01132 Elongation factor P (EF-P) OB domain D3C60_11800 PF08207 Elongation factor P (EF-P) KOW-like domain D3C60_11800 PF09285 Elongation factor P, C-terminal D3C60_11805 PF00557 Metallopeptidase family M24 D3C60_11805 PF01321 Creatinase/Prolidase N-terminal domain D3C60_11810 PF11085 D3C60_11810 D3C60_11815 PF07136 D3C60_11815 D3C60_11825 PF01734 Patatin-like phospholipase D3C60_11830 PF01325 Iron dependent repressor, N-terminal DNA binding domain D3C60_11830 PF02742 Iron dependent repressor, metal binding and dimerisation domain D3C60_11835 PF03099 Biotin/lipoate A/B protein ligase family D3C60_11840 PF00581 Rhodanese-like domain D3C60_11845 PF02347 Glycine cleavage system P-protein D3C60_11850 PF02347 Glycine cleavage system P-protein D3C60_11855 PF01571 Aminomethyltransferase folate-binding domain D3C60_11855 PF08669 Glycine cleavage T-protein C-terminal barrel domain D3C60_11860 PF00176 SNF2 family N-terminal domain D3C60_11860 PF00271 Helicase conserved C-terminal domain D3C60_11865 PF11079 D3C60_11865 D3C60_11870 PF08671 Anti-repressor SinI D3C60_11875 PF01381 Helix-turn-helix D3C60_11875 PF08671 Anti-repressor SinI D3C60_11880 PF12389 D3C60_11880 D3C60_11885 PF00717 Peptidase S24-like D3C60_11895 PF13028 Protein of unknown function (DUF3889) D3C60_11900 PF14038 D3C60_11900 D3C60_11905 PF14173 D3C60_11905 D3C60_11910 PF15980 D3C60_11910 D3C60_11920 PF07963 Prokaryotic N-terminal methylation motif D3C60_11925 PF07963 Prokaryotic N-terminal methylation motif D3C60_11930 PF00482 Type II secretion system (T2SS), protein F D3C60_11935 PF00437 Type II/IV secretion system protein D3C60_11940 PF01544 CorA-like Mg2+ transporter protein D3C60_11945 PF00571 CBS domain D3C60_11945 PF01595 D3C60_11945 D3C60_11945 PF03471 Transporter associated domain D3C60_11950 PF01740 STAS domain D3C60_11960 PF03960 ArsC family D3C60_11965 PF11117 D3C60_11965 D3C60_11970 PF00753 Metallo-beta-lactamase superfamily D3C60_11975 PF10958 D3C60_11975 D3C60_11980 PF01910 Domain of unknown function DUF77 D3C60_11990 PF00246 Zinc carboxypeptidase D3C60_11995 PF00480 ROK family D3C60_12000 PF06014 Bacterial protein of unknown function (DUF910) D3C60_12005 PF03553 D3C60_12005 D3C60_12015 PF01812 5-formyltetrahydrofolate cyclo-ligase family D3C60_12020 PF00471 Ribosomal protein L33 D3C60_12030 PF02618 YceG-like family D3C60_12035 PF00005 ABC transporter D3C60_12040 PF00005 ABC transporter D3C60_12045 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_12050 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_12055 PF12849 PBP superfamily domain D3C60_12060 PF00905 Penicillin binding protein transpeptidase domain D3C60_12060 PF03717 Penicillin-binding Protein dimerisation domain D3C60_12065 PF07690 Major Facilitator Superfamily D3C60_12070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D3C60_12070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D3C60_12075 PF04306 D3C60_12075 D3C60_12080 PF06691 D3C60_12080 D3C60_12090 PF04551 GcpE protein D3C60_12105 PF01475 Ferric uptake regulator family D3C60_12110 PF02588 D3C60_12110 D3C60_12110 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D3C60_12115 PF11116 D3C60_12115 D3C60_12120 PF01261 Xylose isomerase-like TIM barrel D3C60_12125 PF00270 DEAD/DEAH box helicase D3C60_12125 PF00271 Helicase conserved C-terminal domain D3C60_12130 PF14181 D3C60_12130 D3C60_12135 PF02401 LytB protein D3C60_12140 PF01784 NIF3 (NGG1p interacting factor 3) D3C60_12145 PF04816 Family of unknown function (DUF633) D3C60_12150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3C60_12155 PF00140 Sigma-70 factor, region 1 D3C60_12155 PF03979 Sigma-70 factor, region 1 D3C60_12155 PF04539 Sigma-70 region 3 D3C60_12155 PF04542 Sigma-70 region 2 D3C60_12155 PF04545 Sigma-70, region 4 D3C60_12160 PF01807 CHC2 zinc finger D3C60_12160 PF08275 DNA primase catalytic core, N-terminal domain D3C60_12160 PF10410 DnaB-helicase binding domain of primase D3C60_12160 PF13155 Toprim-like D3C60_12165 PF02639 D3C60_12165 D3C60_12170 PF03618 D3C60_12170 D3C60_12175 PF00571 CBS domain D3C60_12175 PF08279 HTH domain D3C60_12180 PF02092 D3C60_12180 D3C60_12180 PF05746 DALR anticodon binding domain D3C60_12185 PF02091 Glycyl-tRNA synthetase alpha subunit D3C60_12190 PF02565 Recombination protein O C terminal D3C60_12190 PF11967 Recombination protein O N terminal D3C60_12195 PF14006 D3C60_12195 D3C60_12200 PF01926 50S ribosome-binding GTPase D3C60_12200 PF07650 KH domain D3C60_12205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3C60_12210 PF01219 Prokaryotic diacylglycerol kinase D3C60_12215 PF02130 Uncharacterized protein family UPF0054 D3C60_12220 PF01966 HD domain D3C60_12220 PF07697 D3C60_12220 D3C60_12220 PF07698 D3C60_12220 D3C60_12225 PF02562 PhoH-like protein D3C60_12230 PF06898 D3C60_12230 D3C60_12235 PF07873 YabP family D3C60_12245 PF12127 D3C60_12245 D3C60_12250 PF01957 NfeD-like C-terminal, partner-binding D3C60_12250 PF01972 Serine dehydrogenase proteinase D3C60_12255 PF09424 Yqey-like protein D3C60_12260 PF01165 Ribosomal protein S21 D3C60_12265 PF02690 D3C60_12265 D3C60_12275 PF00919 Uncharacterized protein family UPF0004 D3C60_12275 PF01938 TRAM domain D3C60_12275 PF04055 Radical SAM superfamily D3C60_12280 PF04452 RNA methyltransferase D3C60_12285 PF06325 Ribosomal protein L11 methyltransferase (PrmA) D3C60_12290 PF00226 DnaJ domain D3C60_12290 PF00684 DnaJ central domain D3C60_12290 PF01556 DnaJ C terminal domain D3C60_12295 PF00012 Hsp70 protein D3C60_12300 PF01025 GrpE D3C60_12305 PF01628 HrcA protein C terminal domain D3C60_12310 PF04055 Radical SAM superfamily D3C60_12310 PF06969 HemN C-terminal domain D3C60_12315 PF00009 Elongation factor Tu GTP binding domain D3C60_12315 PF00679 Elongation factor G C-terminus D3C60_12315 PF03144 Elongation factor Tu domain 2 D3C60_12315 PF06421 GTP-binding protein LepA C-terminus D3C60_12320 PF12438 D3C60_12320 D3C60_12325 PF07454 D3C60_12325 D3C60_12330 PF03418 Germination protease D3C60_12335 PF01649 Ribosomal protein S20 D3C60_12340 PF06144 DNA polymerase III, delta subunit D3C60_12345 PF14141 D3C60_12345 D3C60_12350 PF00753 Metallo-beta-lactamase superfamily D3C60_12350 PF03772 D3C60_12350 D3C60_12350 PF13567 D3C60_12350 D3C60_12355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3C60_12360 PF10531 SLBB domain D3C60_12360 PF12836 Helix-hairpin-helix motif D3C60_12365 PF03807 NADP oxidoreductase coenzyme F420-dependent D3C60_12365 PF14748 Pyrroline-5-carboxylate reductase dimerisation D3C60_12370 PF13649 Methyltransferase domain D3C60_12375 PF02410 Oligomerisation domain D3C60_12380 PF01966 HD domain D3C60_12385 PF01467 Cytidylyltransferase D3C60_12390 PF01985 CRS1 / YhbY (CRM) domain D3C60_12395 PF01488 Shikimate / quinate 5-dehydrogenase D3C60_12395 PF08501 Shikimate dehydrogenase substrate binding domain D3C60_12400 PF01926 50S ribosome-binding GTPase D3C60_12405 PF08282 haloacid dehalogenase-like hydrolase D3C60_12405 PF13242 HAD-hyrolase-like D3C60_12410 PF08970 Sporulation inhibitor A D3C60_12415 PF13472 GDSL-like Lipase/Acylhydrolase family D3C60_12420 PF01522 Polysaccharide deacetylase D3C60_12425 PF09335 D3C60_12425 D3C60_12430 PF00583 Acetyltransferase (GNAT) family D3C60_12435 PF07690 Major Facilitator Superfamily D3C60_12440 PF04542 Sigma-70 region 2 D3C60_12440 PF04545 Sigma-70, region 4 D3C60_12450 PF03629 Domain of unknown function (DUF303) D3C60_12455 PF03551 Transcriptional regulator PadR-like family D3C60_12460 PF06445 GyrI-like small molecule binding domain D3C60_12460 PF12833 Helix-turn-helix domain D3C60_12470 PF13238 AAA domain D3C60_12475 PF07690 Major Facilitator Superfamily D3C60_12480 PF08050 D3C60_12480 D3C60_12485 PF00583 Acetyltransferase (GNAT) family D3C60_12490 PF05163 DinB family D3C60_12495 PF10852 D3C60_12495 D3C60_12500 PF08282 haloacid dehalogenase-like hydrolase D3C60_12505 PF08282 haloacid dehalogenase-like hydrolase D3C60_12510 PF01380 SIS domain D3C60_12510 PF01418 Helix-turn-helix domain, rpiR family D3C60_12515 PF01238 Phosphomannose isomerase type I D3C60_12520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3C60_12520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3C60_12520 PF02378 Phosphotransferase system, EIIC D3C60_12525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3C60_12525 PF00874 PRD domain D3C60_12525 PF05043 Mga helix-turn-helix domain D3C60_12525 PF08279 HTH domain D3C60_12530 PF12706 Beta-lactamase superfamily domain D3C60_12535 PF04073 Aminoacyl-tRNA editing domain D3C60_12540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_12540 PF03466 LysR substrate binding domain D3C60_12545 PF07690 Major Facilitator Superfamily D3C60_12550 PF00067 Cytochrome P450 D3C60_12550 PF00175 Oxidoreductase NAD-binding domain D3C60_12550 PF00258 Flavodoxin D3C60_12550 PF00667 FAD binding domain D3C60_12555 PF00440 Bacterial regulatory proteins, tetR family D3C60_12555 PF16295 D3C60_12555 D3C60_12560 PF08241 Methyltransferase domain D3C60_12565 PF09501 D3C60_12565 D3C60_12575 PF01226 Formate/nitrite transporter D3C60_12580 PF10057 D3C60_12580 D3C60_12585 PF00384 Molybdopterin oxidoreductase D3C60_12585 PF01568 Molydopterin dinucleotide binding domain D3C60_12585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3C60_12585 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3C60_12585 PF12838 4Fe-4S dicluster domain D3C60_12585 PF13510 2Fe-2S iron-sulfur cluster binding domain D3C60_12590 PF07849 D3C60_12590 D3C60_12600 PF14143 D3C60_12600 D3C60_12605 PF01053 Cys/Met metabolism PLP-dependent enzyme D3C60_12610 PF00291 Pyridoxal-phosphate dependent enzyme D3C60_12615 PF01048 Phosphorylase superfamily D3C60_12620 PF13649 Methyltransferase domain D3C60_12625 PF10750 D3C60_12625 D3C60_12630 PF07423 D3C60_12630 D3C60_12635 PF00905 Penicillin binding protein transpeptidase domain D3C60_12635 PF03717 Penicillin-binding Protein dimerisation domain D3C60_12640 PF01272 Transcription elongation factor, GreA/GreB, C-term D3C60_12640 PF03449 Transcription elongation factor, N-terminal D3C60_12645 PF00485 Phosphoribulokinase / Uridine kinase family D3C60_12650 PF01136 D3C60_12650 D3C60_12650 PF16325 D3C60_12650 D3C60_12655 PF01136 D3C60_12655 D3C60_12660 PF01596 O-methyltransferase D3C60_12665 PF02618 YceG-like family D3C60_12670 PF06949 D3C60_12670 D3C60_12675 PF03652 Uncharacterised protein family (UPF0081) D3C60_12680 PF06135 D3C60_12680 D3C60_12685 PF01411 tRNA synthetases class II (A) D3C60_12685 PF02272 DHHA1 domain D3C60_12685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3C60_12690 PF01594 D3C60_12690 D3C60_12695 PF00005 ABC transporter D3C60_12700 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3C60_12705 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_12710 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_12715 PF13056 D3C60_12715 D3C60_12725 PF05239 PRC-barrel domain D3C60_12730 PF13538 UvrD-like helicase C-terminal domain D3C60_12730 PF13604 AAA domain D3C60_12730 PF14490 Helix-hairpin-helix containing domain D3C60_12735 PF13181 Tetratricopeptide repeat D3C60_12735 PF13414 TPR repeat D3C60_12735 PF13432 Tetratricopeptide repeat D3C60_12740 PF03054 tRNA methyl transferase D3C60_12745 PF00266 Aminotransferase class-V D3C60_12750 PF02082 Transcriptional regulator D3C60_12755 PF03215 Rad17 cell cycle checkpoint protein D3C60_12755 PF05496 Holliday junction DNA helicase ruvB N-terminus D3C60_12755 PF12002 MgsA AAA+ ATPase C terminal D3C60_12755 PF16193 D3C60_12755 D3C60_12760 PF00899 ThiF family D3C60_12770 PF00152 tRNA synthetases class II (D, K and N) D3C60_12770 PF01336 OB-fold nucleic acid binding domain D3C60_12770 PF02938 GAD domain D3C60_12775 PF03129 Anticodon binding domain D3C60_12775 PF13393 Histidyl-tRNA synthetase D3C60_12780 PF01520 N-acetylmuramoyl-L-alanine amidase D3C60_12780 PF08239 Bacterial SH3 domain D3C60_12785 PF02580 D-Tyr-tRNA(Tyr) deacylase D3C60_12790 PF02824 TGS domain D3C60_12790 PF04607 Region found in RelA / SpoT proteins D3C60_12790 PF13291 ACT domain D3C60_12790 PF13328 HD domain D3C60_12795 PF00156 Phosphoribosyl transferase domain D3C60_12800 PF01368 DHH family D3C60_12800 PF02272 DHHA1 domain D3C60_12800 PF10141 D3C60_12800 D3C60_12805 PF06305 D3C60_12805 D3C60_12810 PF02080 TrkA-C domain D3C60_12815 PF02355 Protein export membrane protein D3C60_12815 PF07549 SecD/SecF GG Motif D3C60_12820 PF13797 D3C60_12820 D3C60_12825 PF01943 D3C60_12825 D3C60_12825 PF14667 Polysaccharide biosynthesis C-terminal domain D3C60_12830 PF04239 Protein of unknown function (DUF421) D3C60_12835 PF12670 D3C60_12835 D3C60_12840 PF02699 Preprotein translocase subunit D3C60_12845 PF01702 Queuine tRNA-ribosyltransferase D3C60_12850 PF02547 Queuosine biosynthesis protein D3C60_12855 PF11146 D3C60_12855 D3C60_12860 PF05491 Holliday junction DNA helicase ruvB C-terminus D3C60_12860 PF05496 Holliday junction DNA helicase ruvB N-terminus D3C60_12865 PF01330 RuvA N terminal domain D3C60_12865 PF07499 RuvA, C-terminal domain D3C60_12865 PF14520 Helix-hairpin-helix domain D3C60_12870 PF08955 BofC C-terminal domain D3C60_12870 PF08977 Bypass of Forespore C, N terminal D3C60_12880 PF09580 D3C60_12880 D3C60_12885 PF01476 LysM domain D3C60_12890 PF02445 Quinolinate synthetase A protein D3C60_12895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D3C60_12895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D3C60_12900 PF00890 FAD binding domain D3C60_12900 PF02910 Fumarate reductase flavoprotein C-term D3C60_12905 PF00266 Aminotransferase class-V D3C60_12910 PF02829 3H domain D3C60_12910 PF08279 HTH domain D3C60_12915 PF00800 Prephenate dehydratase D3C60_12920 PF01842 ACT domain D3C60_12925 PF01018 GTP1/OBG D3C60_12925 PF01926 50S ribosome-binding GTPase D3C60_12925 PF09269 Domain of unknown function (DUF1967) D3C60_12930 PF14682 Sporulation initiation phospho-transferase B, C-terminal D3C60_12930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D3C60_12935 PF01016 Ribosomal L27 protein D3C60_12940 PF04327 Protein of unknown function (DUF464) D3C60_12945 PF00829 Ribosomal prokaryotic L21 protein D3C60_12950 PF02163 Peptidase family M50 D3C60_12955 PF01551 Peptidase family M23 D3C60_12960 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3C60_12965 PF03775 Septum formation inhibitor MinC, C-terminal domain D3C60_12970 PF04093 D3C60_12970 D3C60_12975 PF04085 rod shape-determining protein MreC D3C60_12980 PF06723 MreB/Mbl protein D3C60_12985 PF04002 RadC-like JAB domain D3C60_12990 PF12728 Helix-turn-helix domain D3C60_12995 PF01471 Putative peptidoglycan binding domain D3C60_12995 PF01476 LysM domain D3C60_12995 PF01510 N-acetylmuramoyl-L-alanine amidase D3C60_13000 PF05105 D3C60_13000 D3C60_13005 PF09693 D3C60_13005 D3C60_13015 PF10651 Domain of unknown function (DUF2479) D3C60_13020 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain D3C60_13020 PF12708 Pectate lyase superfamily protein D3C60_13025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D3C60_13025 PF06605 Prophage endopeptidase tail D3C60_13030 PF05709 Phage tail protein D3C60_13035 PF01464 Transglycosylase SLT domain D3C60_13035 PF10145 D3C60_13035 D3C60_13050 PF04630 D3C60_13050 D3C60_13060 PF04883 D3C60_13060 D3C60_13065 PF05521 Phage head-tail joining protein D3C60_13070 PF05135 Phage gp6-like head-tail connector protein D3C60_13075 PF01391 Collagen triple helix repeat (20 copies) D3C60_13080 PF05065 Phage capsid family D3C60_13085 PF04586 D3C60_13085 D3C60_13090 PF04860 Phage portal protein D3C60_13100 PF03354 D3C60_13100 D3C60_13105 PF05119 D3C60_13105 D3C60_13130 PF00176 SNF2 family N-terminal domain D3C60_13135 PF08774 VRR-NUC domain D3C60_13140 PF05272 D3C60_13140 D3C60_13150 PF00476 DNA polymerase family A D3C60_13165 PF10991 Protein of unknown function (DUF2815) D3C60_13175 PF10926 D3C60_13175 D3C60_13190 PF01381 Helix-turn-helix D3C60_13195 PF01381 Helix-turn-helix D3C60_13200 PF06114 Domain of unknown function (DUF955) D3C60_13205 PF00239 Resolvase, N terminal domain D3C60_13205 PF07508 Recombinase D3C60_13215 PF02545 Maf-like protein D3C60_13220 PF05036 Sporulation related domain D3C60_13225 PF01478 Type IV leader peptidase family D3C60_13225 PF06750 D3C60_13225 D3C60_13230 PF02875 Mur ligase family, glutamate ligase domain D3C60_13230 PF08245 Mur ligase middle domain D3C60_13235 PF00133 tRNA synthetases class I (I, L, M and V) D3C60_13235 PF08264 Anticodon-binding domain of tRNA D3C60_13235 PF10458 Valyl tRNA synthetase tRNA binding arm D3C60_13250 PF01476 LysM domain D3C60_13255 PF00202 Aminotransferase class-III D3C60_13260 PF00490 Delta-aminolevulinic acid dehydratase D3C60_13265 PF02602 Uroporphyrinogen-III synthase HemD D3C60_13270 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D3C60_13270 PF03900 Porphobilinogen deaminase, C-terminal domain D3C60_13275 PF01578 D3C60_13275 D3C60_13280 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D3C60_13280 PF01488 Shikimate / quinate 5-dehydrogenase D3C60_13280 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D3C60_13290 PF01926 50S ribosome-binding GTPase D3C60_13295 PF00004 ATPase family associated with various cellular activities (AAA) D3C60_13295 PF02190 ATP-dependent protease La (LON) domain D3C60_13295 PF05362 Lon protease (S16) C-terminal proteolytic domain D3C60_13300 PF00004 ATPase family associated with various cellular activities (AAA) D3C60_13300 PF05362 Lon protease (S16) C-terminal proteolytic domain D3C60_13305 PF06689 ClpX C4-type zinc finger D3C60_13305 PF07724 AAA domain (Cdc48 subfamily) D3C60_13305 PF10431 C-terminal, D2-small domain, of ClpB protein D3C60_13310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D3C60_13310 PF05697 Bacterial trigger factor protein (TF) D3C60_13310 PF05698 Bacterial trigger factor protein (TF) C-terminus D3C60_13315 PF14559 Tetratricopeptide repeat D3C60_13320 PF00694 Aconitase C-terminal domain D3C60_13325 PF00330 Aconitase family (aconitate hydratase) D3C60_13330 PF00180 Isocitrate/isopropylmalate dehydrogenase D3C60_13335 PF00682 HMGL-like D3C60_13335 PF08502 LeuA allosteric (dimerisation) domain D3C60_13340 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D3C60_13340 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain D3C60_13345 PF01842 ACT domain D3C60_13345 PF10369 Small subunit of acetolactate synthase D3C60_13350 PF00205 Thiamine pyrophosphate enzyme, central domain D3C60_13350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3C60_13350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3C60_13375 PF12850 Calcineurin-like phosphoesterase superfamily domain D3C60_13380 PF01725 Ham1 family D3C60_13385 PF01138 3' exoribonuclease family, domain 1 D3C60_13385 PF03725 3' exoribonuclease family, domain 2 D3C60_13390 PF10646 D3C60_13390 D3C60_13395 PF01177 Asp/Glu/Hydantoin racemase D3C60_13400 PF01047 MarR family D3C60_13405 PF00196 Bacterial regulatory proteins, luxR family D3C60_13410 PF03061 Thioesterase superfamily D3C60_13415 PF13085 2Fe-2S iron-sulfur cluster binding domain D3C60_13415 PF13183 4Fe-4S dicluster domain D3C60_13420 PF00890 FAD binding domain D3C60_13420 PF02910 Fumarate reductase flavoprotein C-term D3C60_13425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D3C60_13430 PF10702 Protein of unknown function (DUF2507) D3C60_13435 PF00696 Amino acid kinase family D3C60_13435 PF01842 ACT domain D3C60_13435 PF13840 ACT domain D3C60_13445 PF01541 GIY-YIG catalytic domain D3C60_13445 PF02151 UvrB/uvrC motif D3C60_13445 PF08459 UvrC Helix-hairpin-helix N-terminal D3C60_13450 PF00085 Thioredoxin D3C60_13455 PF06964 Alpha-L-arabinofuranosidase C-terminus D3C60_13460 PF00766 Electron transfer flavoprotein FAD-binding domain D3C60_13460 PF01012 Electron transfer flavoprotein domain D3C60_13465 PF01012 Electron transfer flavoprotein domain D3C60_13470 PF00378 Enoyl-CoA hydratase/isomerase family D3C60_13475 PF00440 Bacterial regulatory proteins, tetR family D3C60_13475 PF08359 YsiA-like protein, C-terminal region D3C60_13480 PF00501 AMP-binding enzyme D3C60_13480 PF13193 AMP-binding enzyme C-terminal domain D3C60_13485 PF10924 D3C60_13485 D3C60_13490 PF03994 D3C60_13490 D3C60_13495 PF00488 MutS domain V D3C60_13495 PF01713 Smr domain D3C60_13495 PF05192 MutS domain III D3C60_13500 PF02811 PHP domain D3C60_13500 PF14520 Helix-hairpin-helix domain D3C60_13500 PF14716 Helix-hairpin-helix domain D3C60_13500 PF14791 DNA polymerase beta thumb D3C60_13505 PF02674 D3C60_13505 D3C60_13510 PF05164 Cell division protein ZapA D3C60_13515 PF01351 Ribonuclease HII D3C60_13515 PF11858 Domain of unknown function (DUF3378) D3C60_13520 PF01588 Putative tRNA binding domain D3C60_13520 PF03147 Ferredoxin-fold anticodon binding domain D3C60_13520 PF03483 B3/4 domain D3C60_13520 PF03484 tRNA synthetase B5 domain D3C60_13525 PF01409 tRNA synthetases class II core domain (F) D3C60_13525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D3C60_13530 PF00588 SpoU rRNA Methylase family D3C60_13530 PF08032 RNA 2'-O ribose methyltransferase substrate binding D3C60_13535 PF14098 D3C60_13535 D3C60_13540 PF05651 D3C60_13540 D3C60_13540 PF13556 PucR C-terminal helix-turn-helix domain D3C60_13545 PF01565 FAD binding domain D3C60_13545 PF02913 FAD linked oxidases, C-terminal domain D3C60_13550 PF02754 D3C60_13550 D3C60_13550 PF13183 4Fe-4S dicluster domain D3C60_13555 PF02554 D3C60_13555 D3C60_13555 PF13722 D3C60_13555 D3C60_13560 PF06964 Alpha-L-arabinofuranosidase C-terminus D3C60_13565 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_13570 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_13575 PF01547 Bacterial extracellular solute-binding protein D3C60_13580 PF13685 Iron-containing alcohol dehydrogenase D3C60_13585 PF13242 HAD-hyrolase-like D3C60_13585 PF13344 Haloacid dehalogenase-like hydrolase D3C60_13590 PF00596 Class II Aldolase and Adducin N-terminal domain D3C60_13595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D3C60_13595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D3C60_13600 PF02610 L-arabinose isomerase D3C60_13600 PF11762 L-arabinose isomerase C-terminal domain D3C60_13605 PF04616 Glycosyl hydrolases family 43 D3C60_13610 PF05343 M42 glutamyl aminopeptidase D3C60_13620 PF06961 D3C60_13620 D3C60_13625 PF00453 Ribosomal protein L20 D3C60_13630 PF01632 Ribosomal protein L35 D3C60_13635 PF00707 Translation initiation factor IF-3, C-terminal domain D3C60_13635 PF05198 Translation initiation factor IF-3, N-terminal domain D3C60_13640 PF04172 D3C60_13640 D3C60_13645 PF03788 D3C60_13645 D3C60_13650 PF00072 Response regulator receiver domain D3C60_13650 PF04397 LytTr DNA-binding domain D3C60_13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_13655 PF06580 D3C60_13655 D3C60_13655 PF07694 5TMR of 5TMR-LYT D3C60_13655 PF13492 GAF domain D3C60_13665 PF00702 haloacid dehalogenase-like hydrolase D3C60_13670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3C60_13670 PF02824 TGS domain D3C60_13670 PF03129 Anticodon binding domain D3C60_13670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3C60_13675 PF08812 D3C60_13675 D3C60_13680 PF09335 D3C60_13680 D3C60_13685 PF01695 IstB-like ATP binding protein D3C60_13685 PF07319 Primosomal protein DnaI N-terminus D3C60_13690 PF07261 Replication initiation and membrane attachment D3C60_13695 PF03477 ATP cone domain D3C60_13700 PF02675 S-adenosylmethionine decarboxylase D3C60_13705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3C60_13705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3C60_13710 PF01638 HxlR-like helix-turn-helix D3C60_13715 PF07690 Major Facilitator Superfamily D3C60_13720 PF00248 Aldo/keto reductase family D3C60_13725 PF01121 Dephospho-CoA kinase D3C60_13730 PF02659 D3C60_13730 D3C60_13735 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D3C60_13735 PF06827 Zinc finger found in FPG and IleRS D3C60_13735 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D3C60_13740 PF00476 DNA polymerase family A D3C60_13740 PF01367 5'-3' exonuclease, C-terminal SAM fold D3C60_13740 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D3C60_13745 PF00512 His Kinase A (phospho-acceptor) domain D3C60_13745 PF00989 PAS fold D3C60_13745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_13745 PF16736 D3C60_13745 D3C60_13750 PF00072 Response regulator receiver domain D3C60_13750 PF00486 Transcriptional regulatory protein, C terminal D3C60_13755 PF00056 lactate/malate dehydrogenase, NAD binding domain D3C60_13755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D3C60_13760 PF00180 Isocitrate/isopropylmalate dehydrogenase D3C60_13765 PF00285 Citrate synthase D3C60_13770 PF11208 D3C60_13770 D3C60_13780 PF04284 D3C60_13780 D3C60_13785 PF01594 D3C60_13785 D3C60_13790 PF04186 D3C60_13790 D3C60_13795 PF00224 Pyruvate kinase, barrel domain D3C60_13795 PF00391 PEP-utilising enzyme, mobile domain D3C60_13795 PF02887 Pyruvate kinase, alpha/beta domain D3C60_13800 PF00365 Phosphofructokinase D3C60_13805 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D3C60_13810 PF01039 Carboxyl transferase domain D3C60_13815 PF00390 Malic enzyme, N-terminal domain D3C60_13815 PF03949 Malic enzyme, NAD binding domain D3C60_13820 PF01336 OB-fold nucleic acid binding domain D3C60_13820 PF02811 PHP domain D3C60_13820 PF07733 Bacterial DNA polymerase III alpha subunit D3C60_13820 PF14579 Helix-hairpin-helix motif D3C60_13825 PF14034 D3C60_13825 D3C60_13840 PF01368 DHH family D3C60_13840 PF02272 DHHA1 domain D3C60_13845 PF14007 D3C60_13845 D3C60_13850 PF00392 Bacterial regulatory proteins, gntR family D3C60_13850 PF00571 CBS domain D3C60_13850 PF03061 Thioesterase superfamily D3C60_13850 PF07085 DRTGG domain D3C60_13855 PF13483 Beta-lactamase superfamily domain D3C60_13860 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_13865 PF00206 Lyase D3C60_13865 PF14698 Argininosuccinate lyase C-terminal D3C60_13870 PF00764 Arginosuccinate synthase D3C60_13875 PF00994 Probable molybdopterin binding domain D3C60_13880 PF00871 Acetokinase family D3C60_13885 PF02384 N-6 DNA Methylase D3C60_13890 PF08534 Redoxin D3C60_13895 PF09579 D3C60_13895 D3C60_13900 PF11167 D3C60_13900 D3C60_13905 PF06271 D3C60_13905 D3C60_13910 PF01343 Peptidase family S49 D3C60_13915 PF01513 ATP-NAD kinase D3C60_13920 PF07969 Amidohydrolase family D3C60_13925 PF00501 AMP-binding enzyme D3C60_13925 PF13193 AMP-binding enzyme C-terminal domain D3C60_13930 PF00269 Small, acid-soluble spore proteins, alpha/beta type D3C60_13935 PF02568 Thiamine biosynthesis protein (ThiI) D3C60_13935 PF02926 THUMP domain D3C60_13940 PF00266 Aminotransferase class-V D3C60_13945 PF05525 D3C60_13945 D3C60_13950 PF06160 D3C60_13950 D3C60_13955 PF02811 PHP domain D3C60_13955 PF13263 PHP-associated D3C60_13960 PF00440 Bacterial regulatory proteins, tetR family D3C60_13965 PF13185 GAF domain D3C60_13970 PF00990 GGDEF domain D3C60_13980 PF00163 Ribosomal protein S4/S9 N-terminal domain D3C60_13980 PF01479 S4 domain D3C60_13985 PF00171 Aldehyde dehydrogenase family D3C60_13990 PF09346 SMI1 / KNR4 family (SUKH-1) D3C60_14010 PF01391 Collagen triple helix repeat (20 copies) D3C60_14030 PF00042 Globin D3C60_14030 PF00175 Oxidoreductase NAD-binding domain D3C60_14030 PF00970 Oxidoreductase FAD-binding domain D3C60_14035 PF04434 D3C60_14035 D3C60_14045 PF01965 DJ-1/PfpI family D3C60_14050 PF13472 GDSL-like Lipase/Acylhydrolase family D3C60_14060 PF01545 Cation efflux family D3C60_14060 PF16916 D3C60_14060 D3C60_14065 PF01978 Sugar-specific transcriptional regulator TrmB D3C60_14065 PF11495 Archaeal transcriptional regulator TrmB D3C60_14070 PF03591 D3C60_14070 D3C60_14075 PF05437 D3C60_14075 D3C60_14080 PF00579 tRNA synthetases class I (W and Y) D3C60_14080 PF01479 S4 domain D3C60_14090 PF00501 AMP-binding enzyme D3C60_14090 PF13193 AMP-binding enzyme C-terminal domain D3C60_14095 PF00583 Acetyltransferase (GNAT) family D3C60_14100 PF00571 CBS domain D3C60_14105 PF00850 Histone deacetylase domain D3C60_14115 PF00691 OmpA family D3C60_14115 PF13677 D3C60_14115 D3C60_14120 PF01618 D3C60_14120 D3C60_14125 PF00356 Bacterial regulatory proteins, lacI family D3C60_14125 PF13377 Periplasmic binding protein-like domain D3C60_14130 PF00793 DAHP synthetase I family D3C60_14130 PF01817 Chorismate mutase type II D3C60_14135 PF11009 Protein of unknown function (DUF2847) D3C60_14140 PF12732 D3C60_14140 D3C60_14145 PF06103 D3C60_14145 D3C60_14150 PF01225 Mur ligase family, catalytic domain D3C60_14150 PF02875 Mur ligase family, glutamate ligase domain D3C60_14150 PF08245 Mur ligase middle domain D3C60_14155 PF01580 FtsK/SpoIIIE family D3C60_14155 PF09397 Ftsk gamma domain D3C60_14160 PF01588 Putative tRNA binding domain D3C60_14160 PF14794 Domain of unknown function (DUF4479) D3C60_14165 PF07285 D3C60_14165 D3C60_14170 PF00085 Thioredoxin D3C60_14175 PF11071 D3C60_14175 D3C60_14180 PF05343 M42 glutamyl aminopeptidase D3C60_14185 PF03413 Peptidase propeptide and YPEB domain D3C60_14190 PF00390 Malic enzyme, N-terminal domain D3C60_14190 PF03949 Malic enzyme, NAD binding domain D3C60_14195 PF00753 Metallo-beta-lactamase superfamily D3C60_14200 PF02390 Putative methyltransferase D3C60_14205 PF14165 D3C60_14205 D3C60_14210 PF01636 Phosphotransferase enzyme family D3C60_14215 PF00781 Diacylglycerol kinase catalytic domain D3C60_14225 PF13563 2'-5' RNA ligase superfamily D3C60_14230 PF00291 Pyridoxal-phosphate dependent enzyme D3C60_14235 PF01546 Peptidase family M20/M25/M40 D3C60_14240 PF00860 Permease family D3C60_14245 PF05975 D3C60_14245 D3C60_14250 PF00005 ABC transporter D3C60_14255 PF08220 DeoR-like helix-turn-helix domain D3C60_14260 PF00849 RNA pseudouridylate synthase D3C60_14260 PF01479 S4 domain D3C60_14265 PF01943 D3C60_14265 D3C60_14265 PF14667 Polysaccharide biosynthesis C-terminal domain D3C60_14270 PF03486 HI0933-like protein D3C60_14275 PF02028 BCCT family transporter D3C60_14280 PF10957 D3C60_14280 D3C60_14285 PF00356 Bacterial regulatory proteins, lacI family D3C60_14285 PF13377 Periplasmic binding protein-like domain D3C60_14290 PF01547 Bacterial extracellular solute-binding protein D3C60_14295 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_14300 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_14305 PF02056 Family 4 glycosyl hydrolase D3C60_14305 PF11975 Family 4 glycosyl hydrolase C-terminal domain D3C60_14310 PF00583 Acetyltransferase (GNAT) family D3C60_14315 PF00581 Rhodanese-like domain D3C60_14320 PF00133 tRNA synthetases class I (I, L, M and V) D3C60_14320 PF08264 Anticodon-binding domain of tRNA D3C60_14320 PF09334 tRNA synthetases class I (M) D3C60_14320 PF13603 Leucyl-tRNA synthetase, Domain 2 D3C60_14325 PF14074 D3C60_14325 D3C60_14330 PF01740 STAS domain D3C60_14330 PF13426 PAS domain D3C60_14335 PF07690 Major Facilitator Superfamily D3C60_14340 PF09529 D3C60_14340 D3C60_14350 PF00005 ABC transporter D3C60_14355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_14360 PF00072 Response regulator receiver domain D3C60_14360 PF00486 Transcriptional regulatory protein, C terminal D3C60_14365 PF02687 D3C60_14365 D3C60_14365 PF12704 MacB-like periplasmic core domain D3C60_14370 PF00005 ABC transporter D3C60_14385 PF12679 D3C60_14385 D3C60_14390 PF00005 ABC transporter D3C60_14395 PF00392 Bacterial regulatory proteins, gntR family D3C60_14400 PF10732 D3C60_14400 D3C60_14405 PF00501 AMP-binding enzyme D3C60_14410 PF01022 Bacterial regulatory protein, arsR family D3C60_14415 PF00109 Beta-ketoacyl synthase, N-terminal domain D3C60_14415 PF00550 Phosphopantetheine attachment site D3C60_14415 PF00753 Metallo-beta-lactamase superfamily D3C60_14415 PF02801 Beta-ketoacyl synthase, C-terminal domain D3C60_14415 PF16197 D3C60_14415 D3C60_14420 PF00501 AMP-binding enzyme D3C60_14420 PF00550 Phosphopantetheine attachment site D3C60_14420 PF00668 Condensation domain D3C60_14420 PF13193 AMP-binding enzyme C-terminal domain D3C60_14425 PF00881 Nitroreductase family D3C60_14430 PF00975 Thioesterase domain D3C60_14435 PF07690 Major Facilitator Superfamily D3C60_14440 PF04055 Radical SAM superfamily D3C60_14440 PF16199 D3C60_14440 D3C60_14445 PF06962 Putative rRNA methylase D3C60_14455 PF03009 Glycerophosphoryl diester phosphodiesterase family D3C60_14460 PF10776 D3C60_14460 D3C60_14465 PF12146 Putative lysophospholipase D3C60_14470 PF00132 Bacterial transferase hexapeptide (six repeats) D3C60_14475 PF00324 Amino acid permease D3C60_14480 PF00733 Asparagine synthase D3C60_14480 PF13537 Glutamine amidotransferase domain D3C60_14485 PF00438 S-adenosylmethionine synthetase, N-terminal domain D3C60_14485 PF02772 S-adenosylmethionine synthetase, central domain D3C60_14485 PF02773 S-adenosylmethionine synthetase, C-terminal domain D3C60_14490 PF01293 Phosphoenolpyruvate carboxykinase D3C60_14495 PF10763 Protein of unknown function (DUF2584) D3C60_14500 PF00326 Prolyl oligopeptidase family D3C60_14505 PF13379 NMT1-like family D3C60_14510 PF00005 ABC transporter D3C60_14515 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_14520 PF00293 NUDIX domain D3C60_14525 PF05105 D3C60_14525 D3C60_14530 PF00210 Ferritin-like domain D3C60_14540 PF13115 D3C60_14540 D3C60_14545 PF02664 S-Ribosylhomocysteinase (LuxS) D3C60_14550 PF01809 D3C60_14550 D3C60_14555 PF00484 Carbonic anhydrase D3C60_14560 PF01197 Ribosomal protein L31 D3C60_14565 PF01654 D3C60_14565 D3C60_14570 PF02322 D3C60_14570 D3C60_14575 PF07561 D3C60_14575 D3C60_14585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D3C60_14585 PF13378 Enolase C-terminal domain-like D3C60_14590 PF00501 AMP-binding enzyme D3C60_14590 PF13193 AMP-binding enzyme C-terminal domain D3C60_14595 PF00378 Enoyl-CoA hydratase/isomerase family D3C60_14600 PF00561 alpha/beta hydrolase fold D3C60_14605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3C60_14605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3C60_14605 PF16582 D3C60_14605 D3C60_14610 PF00425 chorismate binding enzyme D3C60_14615 PF01258 Prokaryotic dksA/traR C4-type zinc finger D3C60_14620 PF03073 TspO/MBR family D3C60_14745 PF09515 Thiamine transporter protein (Thia_YuaJ) D3C60_14750 PF01145 SPFH domain / Band 7 family D3C60_14750 PF15975 D3C60_14750 D3C60_14760 PF12867 DinB superfamily D3C60_14765 PF03473 MOSC domain D3C60_14770 PF00465 Iron-containing alcohol dehydrogenase D3C60_14775 PF00171 Aldehyde dehydrogenase family D3C60_14790 PF02080 TrkA-C domain D3C60_14790 PF02254 TrkA-N domain D3C60_14795 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D3C60_14795 PF13457 SH3-like domain D3C60_14800 PF00042 Globin D3C60_14800 PF00175 Oxidoreductase NAD-binding domain D3C60_14800 PF00970 Oxidoreductase FAD-binding domain D3C60_14805 PF00190 Cupin D3C60_14820 PF02673 D3C60_14820 D3C60_14825 PF01594 D3C60_14825 D3C60_14830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3C60_14835 PF01965 DJ-1/PfpI family D3C60_14840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3C60_14840 PF00672 HAMP domain D3C60_14840 PF02743 Cache domain D3C60_14845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3C60_14845 PF00672 HAMP domain D3C60_14845 PF02743 Cache domain D3C60_14850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3C60_14850 PF00672 HAMP domain D3C60_14850 PF02743 Cache domain D3C60_14855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3C60_14855 PF00672 HAMP domain D3C60_14855 PF02743 Cache domain D3C60_14870 PF03060 Nitronate monooxygenase D3C60_14875 PF01894 Uncharacterised protein family UPF0047 D3C60_14880 PF00128 Alpha amylase, catalytic domain D3C60_14880 PF16657 D3C60_14880 D3C60_14885 PF00571 CBS domain D3C60_14885 PF01595 D3C60_14885 D3C60_14885 PF03471 Transporter associated domain D3C60_14890 PF04298 D3C60_14890 D3C60_14900 PF11458 Membrane-integrating protein Mistic D3C60_14905 PF02254 TrkA-N domain D3C60_14905 PF07885 Ion channel D3C60_14910 PF08868 YugN-like family D3C60_14920 PF00342 Phosphoglucose isomerase D3C60_14930 PF03358 NADPH-dependent FMN reductase D3C60_14940 PF00465 Iron-containing alcohol dehydrogenase D3C60_14945 PF00465 Iron-containing alcohol dehydrogenase D3C60_14950 PF04070 D3C60_14950 D3C60_14955 PF00575 S1 RNA binding domain D3C60_14960 PF00155 Aminotransferase class I and II D3C60_14965 PF01037 AsnC family D3C60_14965 PF13412 Winged helix-turn-helix DNA-binding D3C60_14970 PF00561 alpha/beta hydrolase fold D3C60_14975 PF08958 Domain of unknown function (DUF1871) D3C60_14980 PF00155 Aminotransferase class I and II D3C60_14985 PF00512 His Kinase A (phospho-acceptor) domain D3C60_14985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_14990 PF08810 Kinase associated protein B D3C60_14995 PF00929 Exonuclease D3C60_15000 PF07690 Major Facilitator Superfamily D3C60_15005 PF00905 Penicillin binding protein transpeptidase domain D3C60_15005 PF00912 Transglycosylase D3C60_15010 PF04134 D3C60_15010 D3C60_15015 PF17328 D3C60_15015 D3C60_15020 PF00989 PAS fold D3C60_15020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_15020 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D3C60_15020 PF17203 D3C60_15020 D3C60_15025 PF00072 Response regulator receiver domain D3C60_15030 PF02608 Basic membrane protein D3C60_15035 PF00005 ABC transporter D3C60_15040 PF02653 D3C60_15040 D3C60_15045 PF02653 D3C60_15045 D3C60_15055 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains D3C60_15055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D3C60_15055 PF13244 D3C60_15055 D3C60_15060 PF04039 D3C60_15060 D3C60_15065 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D3C60_15070 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains D3C60_15075 PF01899 D3C60_15075 D3C60_15080 PF04066 D3C60_15080 D3C60_15085 PF03334 D3C60_15085 D3C60_15090 PF03061 Thioesterase superfamily D3C60_15095 PF00072 Response regulator receiver domain D3C60_15095 PF00196 Bacterial regulatory proteins, luxR family D3C60_15100 PF07730 Histidine kinase D3C60_15105 PF05952 D3C60_15105 D3C60_15110 PF00348 Polyprenyl synthetase D3C60_15115 PF08181 D3C60_15115 D3C60_15130 PF00563 EAL domain D3C60_15130 PF08668 HDOD domain D3C60_15135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D3C60_15140 PF00857 Isochorismatase family D3C60_15145 PF07997 Protein of unknown function (DUF1694) D3C60_15150 PF14166 D3C60_15150 D3C60_15155 PF10676 D3C60_15155 D3C60_15160 PF01594 D3C60_15160 D3C60_15165 PF10842 D3C60_15165 D3C60_15170 PF01966 HD domain D3C60_15175 PF00106 short chain dehydrogenase D3C60_15180 PF17355 D3C60_15180 D3C60_15190 PF01580 FtsK/SpoIIIE family D3C60_15190 PF12538 DNA transporter D3C60_15195 PF10140 WXG100 protein secretion system (Wss), protein YukC D3C60_15200 PF08817 WXG100 protein secretion system (Wss), protein YukD D3C60_15205 PF06013 Proteins of 100 residues with WXG D3C60_15210 PF06018 CodY GAF-like domain D3C60_15210 PF13556 PucR C-terminal helix-turn-helix domain D3C60_15215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3C60_15215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D3C60_15220 PF10042 D3C60_15220 D3C60_15225 PF03621 MbtH-like protein D3C60_15230 PF00501 AMP-binding enzyme D3C60_15230 PF00550 Phosphopantetheine attachment site D3C60_15230 PF00668 Condensation domain D3C60_15230 PF00975 Thioesterase domain D3C60_15230 PF13193 AMP-binding enzyme C-terminal domain D3C60_15235 PF00550 Phosphopantetheine attachment site D3C60_15235 PF00857 Isochorismatase family D3C60_15240 PF00501 AMP-binding enzyme D3C60_15240 PF13193 AMP-binding enzyme C-terminal domain D3C60_15245 PF00425 chorismate binding enzyme D3C60_15250 PF00106 short chain dehydrogenase D3C60_15255 PF00756 Putative esterase D3C60_15260 PF00174 Oxidoreductase molybdopterin binding domain D3C60_15265 PF02632 BioY family D3C60_15270 PF03553 D3C60_15270 D3C60_15270 PF13726 D3C60_15270 D3C60_15275 PF00883 Cytosol aminopeptidase family, catalytic domain D3C60_15275 PF02789 Cytosol aminopeptidase family, N-terminal domain D3C60_15280 PF02681 D3C60_15280 D3C60_15285 PF06725 3D domain D3C60_15290 PF14068 D3C60_15290 D3C60_15295 PF17302 D3C60_15295 D3C60_15300 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_15310 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_15315 PF00478 IMP dehydrogenase / GMP reductase domain D3C60_15325 PF01944 D3C60_15325 D3C60_15330 PF00005 ABC transporter D3C60_15340 PF09221 Bacteriocin class IId cyclical uberolysin-like D3C60_15350 PF13302 Acetyltransferase (GNAT) domain D3C60_15355 PF00106 short chain dehydrogenase D3C60_15360 PF01521 Iron-sulphur cluster biosynthesis D3C60_15365 PF01678 Diaminopimelate epimerase D3C60_15370 PF01773 Na+ dependent nucleoside transporter N-terminus D3C60_15370 PF07662 Na+ dependent nucleoside transporter C-terminus D3C60_15375 PF07293 D3C60_15375 D3C60_15380 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_15385 PF07315 Protein of unknown function (DUF1462) D3C60_15390 PF01106 NifU-like domain D3C60_15395 PF00326 Prolyl oligopeptidase family D3C60_15395 PF07676 WD40-like Beta Propeller Repeat D3C60_15400 PF00288 GHMP kinases N terminal domain D3C60_15400 PF08544 GHMP kinases C terminal D3C60_15405 PF00291 Pyridoxal-phosphate dependent enzyme D3C60_15410 PF00742 Homoserine dehydrogenase D3C60_15410 PF01842 ACT domain D3C60_15410 PF03447 Homoserine dehydrogenase, NAD binding domain D3C60_15420 PF04608 Phosphatidylglycerophosphatase A D3C60_15425 PF13242 HAD-hyrolase-like D3C60_15425 PF13344 Haloacid dehalogenase-like hydrolase D3C60_15430 PF01934 Protein of unknown function DUF86 D3C60_15435 PF06265 Protein of unknown function (DUF1027) D3C60_15445 PF04055 Radical SAM superfamily D3C60_15445 PF16881 D3C60_15445 D3C60_15450 PF01551 Peptidase family M23 D3C60_15455 PF09560 D3C60_15455 D3C60_15460 PF00149 Calcineurin-like phosphoesterase D3C60_15460 PF02872 5'-nucleotidase, C-terminal domain D3C60_15465 PF01925 D3C60_15465 D3C60_15470 PF01904 Protein of unknown function DUF72 D3C60_15480 PF01979 Amidohydrolase family D3C60_15485 PF07905 D3C60_15485 D3C60_15485 PF13556 PucR C-terminal helix-turn-helix domain D3C60_15510 PF07690 Major Facilitator Superfamily D3C60_15515 PF00266 Aminotransferase class-V D3C60_15520 PF01546 Peptidase family M20/M25/M40 D3C60_15525 PF04231 Endonuclease I D3C60_15530 PF00005 ABC transporter D3C60_15530 PF08402 TOBE domain D3C60_15535 PF00392 Bacterial regulatory proteins, gntR family D3C60_15535 PF07702 UTRA domain D3C60_15540 PF00294 pfkB family carbohydrate kinase D3C60_15545 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_15550 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_15555 PF01547 Bacterial extracellular solute-binding protein D3C60_15560 PF01380 SIS domain D3C60_15565 PF13411 MerR HTH family regulatory protein D3C60_15580 PF17418 D3C60_15580 D3C60_15585 PF07853 D3C60_15585 D3C60_15595 PF01541 GIY-YIG catalytic domain D3C60_15600 PF01266 FAD dependent oxidoreductase D3C60_15610 PF10903 D3C60_15610 D3C60_15620 PF01374 Glycosyl hydrolase family 46 D3C60_15625 PF01458 Uncharacterized protein family (UPF0051) D3C60_15630 PF01592 NifU-like N terminal domain D3C60_15635 PF00266 Aminotransferase class-V D3C60_15640 PF01458 Uncharacterized protein family (UPF0051) D3C60_15645 PF00005 ABC transporter D3C60_15655 PF02627 Carboxymuconolactone decarboxylase family D3C60_15660 PF03180 NLPA lipoprotein D3C60_15665 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_15670 PF00005 ABC transporter D3C60_15670 PF09383 NIL domain D3C60_15675 PF02036 SCP-2 sterol transfer family D3C60_15680 PF00085 Thioredoxin D3C60_15685 PF13155 Toprim-like D3C60_15690 PF10830 D3C60_15690 D3C60_15695 PF01597 Glycine cleavage H-protein D3C60_15700 PF03960 ArsC family D3C60_15705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3C60_15705 PF02770 Acyl-CoA dehydrogenase, middle domain D3C60_15705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3C60_15710 PF00108 Thiolase, N-terminal domain D3C60_15710 PF02803 Thiolase, C-terminal domain D3C60_15715 PF00378 Enoyl-CoA hydratase/isomerase family D3C60_15715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3C60_15715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3C60_15720 PF14115 D3C60_15720 D3C60_15725 PF01619 Proline dehydrogenase D3C60_15735 PF07875 D3C60_15735 D3C60_15740 PF01047 MarR family D3C60_15745 PF07690 Major Facilitator Superfamily D3C60_15750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_15750 PF03466 LysR substrate binding domain D3C60_15755 PF06314 Acetoacetate decarboxylase (ADC) D3C60_15760 PF02558 Ketopantoate reductase PanE/ApbA D3C60_15760 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3C60_15765 PF10835 D3C60_15765 D3C60_15770 PF00005 ABC transporter D3C60_15775 PF14039 D3C60_15775 D3C60_15780 PF01432 Peptidase family M3 D3C60_15780 PF08439 Oligopeptidase F D3C60_15785 PF00106 short chain dehydrogenase D3C60_15790 PF00210 Ferritin-like domain D3C60_15795 PF13180 PDZ domain D3C60_15795 PF13365 Trypsin-like peptidase domain D3C60_15800 PF00072 Response regulator receiver domain D3C60_15800 PF00486 Transcriptional regulatory protein, C terminal D3C60_15805 PF00512 His Kinase A (phospho-acceptor) domain D3C60_15805 PF00672 HAMP domain D3C60_15805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_15815 PF00440 Bacterial regulatory proteins, tetR family D3C60_15820 PF00206 Lyase D3C60_15820 PF10415 Fumarase C C-terminus D3C60_15825 PF13113 D3C60_15825 D3C60_15830 PF03323 D3C60_15830 D3C60_15835 PF03845 D3C60_15835 D3C60_15840 PF05504 Spore germination B3/ GerAC like, C-terminal D3C60_15845 PF00072 Response regulator receiver domain D3C60_15845 PF00196 Bacterial regulatory proteins, luxR family D3C60_15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_15850 PF07730 Histidine kinase D3C60_15855 PF09922 Cell wall-active antibiotics response protein (DUF2154) D3C60_15860 PF13349 D3C60_15860 D3C60_15865 PF04012 D3C60_15865 D3C60_15875 PF07690 Major Facilitator Superfamily D3C60_15880 PF01923 Cobalamin adenosyltransferase D3C60_15885 PF00005 ABC transporter D3C60_15890 PF01032 FecCD transport family D3C60_15895 PF01497 Periplasmic binding protein D3C60_15900 PF00106 short chain dehydrogenase D3C60_15905 PF08450 SMP-30/Gluconolaconase/LRE-like region D3C60_15910 PF00512 His Kinase A (phospho-acceptor) domain D3C60_15910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_15915 PF00072 Response regulator receiver domain D3C60_15915 PF00486 Transcriptional regulatory protein, C terminal D3C60_15920 PF12645 D3C60_15920 D3C60_15925 PF04545 Sigma-70, region 4 D3C60_15930 PF12841 D3C60_15930 D3C60_15935 PF00190 Cupin D3C60_15940 PF14184 D3C60_15940 D3C60_15945 PF00005 ABC transporter D3C60_15950 PF01032 FecCD transport family D3C60_15955 PF01032 FecCD transport family D3C60_15960 PF01497 Periplasmic binding protein D3C60_15965 PF13520 Amino acid permease D3C60_15975 PF09575 D3C60_15975 D3C60_15980 PF04307 D3C60_15980 D3C60_15985 PF00884 Sulfatase D3C60_15990 PF12727 PBP superfamily domain D3C60_15990 PF12728 Helix-turn-helix domain D3C60_15995 PF13531 Bacterial extracellular solute-binding protein D3C60_16000 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_16005 PF00072 Response regulator receiver domain D3C60_16005 PF00196 Bacterial regulatory proteins, luxR family D3C60_16010 PF07730 Histidine kinase D3C60_16015 PF00005 ABC transporter D3C60_16020 PF12698 ABC-2 family transporter protein D3C60_16025 PF12698 ABC-2 family transporter protein D3C60_16030 PF00248 Aldo/keto reductase family D3C60_16045 PF00999 Sodium/hydrogen exchanger family D3C60_16055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3C60_16055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3C60_16060 PF00175 Oxidoreductase NAD-binding domain D3C60_16060 PF00258 Flavodoxin D3C60_16060 PF00667 FAD binding domain D3C60_16065 PF13245 Part of AAA domain D3C60_16065 PF13538 UvrD-like helicase C-terminal domain D3C60_16070 PF03458 D3C60_16070 D3C60_16075 PF13688 Metallo-peptidase family M12 D3C60_16080 PF02600 Disulfide bond formation protein DsbB D3C60_16085 PF13462 Thioredoxin D3C60_16090 PF00122 E1-E2 ATPase D3C60_16090 PF00403 Heavy-metal-associated domain D3C60_16090 PF00702 haloacid dehalogenase-like hydrolase D3C60_16095 PF00122 E1-E2 ATPase D3C60_16095 PF00403 Heavy-metal-associated domain D3C60_16095 PF00702 haloacid dehalogenase-like hydrolase D3C60_16100 PF00403 Heavy-metal-associated domain D3C60_16105 PF02583 Metal-sensitive transcriptional repressor D3C60_16110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3C60_16110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3C60_16115 PF02525 Flavodoxin-like fold D3C60_16120 PF00296 Luciferase-like monooxygenase D3C60_16125 PF00462 Glutaredoxin D3C60_16130 PF00296 Luciferase-like monooxygenase D3C60_16135 PF00005 ABC transporter D3C60_16140 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_16145 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_16150 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3C60_16155 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3C60_16160 PF00583 Acetyltransferase (GNAT) family D3C60_16165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_16165 PF03466 LysR substrate binding domain D3C60_16170 PF00106 short chain dehydrogenase D3C60_16175 PF01337 Barstar (barnase inhibitor) D3C60_16180 PF00545 ribonuclease D3C60_16190 PF01337 Barstar (barnase inhibitor) D3C60_16200 PF01668 SmpB protein D3C60_16205 PF00575 S1 RNA binding domain D3C60_16205 PF00773 RNB domain D3C60_16205 PF08206 Ribonuclease B OB domain D3C60_16210 PF12146 Putative lysophospholipase D3C60_16215 PF03840 Preprotein translocase SecG subunit D3C60_16220 PF01381 Helix-turn-helix D3C60_16225 PF13560 Helix-turn-helix domain D3C60_16230 PF13560 Helix-turn-helix domain D3C60_16235 PF01638 HxlR-like helix-turn-helix D3C60_16240 PF00512 His Kinase A (phospho-acceptor) domain D3C60_16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_16245 PF00072 Response regulator receiver domain D3C60_16245 PF00486 Transcriptional regulatory protein, C terminal D3C60_16250 PF12730 D3C60_16250 D3C60_16260 PF00005 ABC transporter D3C60_16265 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_16270 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3C60_16275 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_16280 PF00005 ABC transporter D3C60_16280 PF00571 CBS domain D3C60_16290 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_16295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3C60_16300 PF00528 Binding-protein-dependent transport system inner membrane component D3C60_16305 PF00005 ABC transporter D3C60_16305 PF00571 CBS domain D3C60_16315 PF01914 D3C60_16315 D3C60_16335 PF00583 Acetyltransferase (GNAT) family D3C60_16340 PF07690 Major Facilitator Superfamily D3C60_16345 PF01261 Xylose isomerase-like TIM barrel D3C60_16350 PF02585 GlcNAc-PI de-N-acetylase D3C60_16355 PF08889 D3C60_16355 D3C60_16360 PF13480 Acetyltransferase (GNAT) domain D3C60_16365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3C60_16370 PF01370 NAD dependent epimerase/dehydratase family D3C60_16375 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3C60_16380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3C60_16380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3C60_16380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3C60_16385 PF02225 PA domain D3C60_16385 PF04389 Peptidase family M28 D3C60_16390 PF00113 Enolase, C-terminal TIM barrel domain D3C60_16390 PF03952 Enolase, N-terminal domain D3C60_16395 PF01676 Metalloenzyme superfamily D3C60_16395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D3C60_16400 PF00121 Triosephosphate isomerase D3C60_16405 PF00162 Phosphoglycerate kinase D3C60_16415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3C60_16415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3C60_16420 PF04198 Putative sugar-binding domain D3C60_16425 PF00083 Sugar (and other) transporter D3C60_16430 PF00392 Bacterial regulatory proteins, gntR family D3C60_16430 PF13377 Periplasmic binding protein-like domain D3C60_16435 PF00296 Luciferase-like monooxygenase D3C60_16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_16445 PF03466 LysR substrate binding domain D3C60_16450 PF00892 EamA-like transporter family D3C60_16455 PF00324 Amino acid permease D3C60_16460 PF01380 SIS domain D3C60_16460 PF01418 Helix-turn-helix domain, rpiR family D3C60_16465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D3C60_16465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D3C60_16470 PF02447 D3C60_16470 D3C60_16475 PF01527 Transposase D3C60_16480 PF02589 Uncharacterised ACR, YkgG family COG1556 D3C60_16485 PF02589 Uncharacterised ACR, YkgG family COG1556 D3C60_16485 PF11870 D3C60_16485 D3C60_16485 PF13183 4Fe-4S dicluster domain D3C60_16490 PF02754 D3C60_16490 D3C60_16495 PF00155 Aminotransferase class I and II D3C60_16500 PF00392 Bacterial regulatory proteins, gntR family D3C60_16500 PF07729 FCD domain D3C60_16505 PF02652 D3C60_16505 D3C60_16510 PF00309 D3C60_16510 D3C60_16510 PF04552 Sigma-54, DNA binding domain D3C60_16510 PF04963 Sigma-54 factor, core binding domain D3C60_16515 PF09628 YvfG protein D3C60_16520 PF04230 D3C60_16520 D3C60_16525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3C60_16530 PF00132 Bacterial transferase hexapeptide (six repeats) D3C60_16535 PF02397 D3C60_16535 D3C60_16540 PF01943 D3C60_16540 D3C60_16540 PF14667 Polysaccharide biosynthesis C-terminal domain D3C60_16545 PF00535 Glycosyl transferase family 2 D3C60_16550 PF04230 D3C60_16550 D3C60_16555 PF00535 Glycosyl transferase family 2 D3C60_16560 PF14897 D3C60_16560 D3C60_16565 PF00534 Glycosyl transferases group 1 D3C60_16565 PF13439 Glycosyltransferase Family 4 D3C60_16570 PF00535 Glycosyl transferase family 2 D3C60_16575 PF00534 Glycosyl transferases group 1 D3C60_16575 PF13477 Glycosyl transferase 4-like D3C60_16580 PF02719 Polysaccharide biosynthesis protein D3C60_16580 PF13727 CoA-binding domain D3C60_16585 PF13614 AAA domain D3C60_16590 PF02706 Chain length determinant protein D3C60_16595 PF01381 Helix-turn-helix D3C60_16595 PF08671 Anti-repressor SinI D3C60_16600 PF00135 Carboxylesterase family D3C60_16605 PF01872 RibD C-terminal domain D3C60_16615 PF00583 Acetyltransferase (GNAT) family D3C60_16620 PF05870 Phenolic acid decarboxylase (PAD) D3C60_16635 PF07252 Protein of unknown function (DUF1433) D3C60_16645 PF07252 Protein of unknown function (DUF1433) D3C60_16665 PF00251 Glycosyl hydrolases family 32 N-terminal domain D3C60_16665 PF08244 Glycosyl hydrolases family 32 C terminal D3C60_16670 PF01306 LacY proton/sugar symporter D3C60_16675 PF00356 Bacterial regulatory proteins, lacI family D3C60_16675 PF13377 Periplasmic binding protein-like domain D3C60_16680 PF00574 Clp protease D3C60_16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_16685 PF03466 LysR substrate binding domain D3C60_16690 PF04303 PrpF protein D3C60_16695 PF00083 Sugar (and other) transporter D3C60_16700 PF03641 Possible lysine decarboxylase D3C60_16705 PF03819 MazG nucleotide pyrophosphohydrolase domain D3C60_16710 PF00916 D3C60_16710 D3C60_16710 PF01740 STAS domain D3C60_16715 PF00484 Carbonic anhydrase D3C60_16725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3C60_16725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3C60_16730 PF00545 ribonuclease D3C60_16735 PF00797 N-acetyltransferase D3C60_16740 PF00381 PTS HPr component phosphorylation site D3C60_16745 PF02650 WhiA C-terminal HTH domain D3C60_16745 PF10298 WhiA N-terminal LAGLIDADG-like domain D3C60_16745 PF14527 WhiA LAGLIDADG-like domain D3C60_16750 PF01933 Uncharacterised protein family UPF0052 D3C60_16755 PF03668 D3C60_16755 D3C60_16760 PF00293 NUDIX domain D3C60_16765 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_16770 PF00877 NlpC/P60 family D3C60_16775 PF13432 Tetratricopeptide repeat D3C60_16780 PF00512 His Kinase A (phospho-acceptor) domain D3C60_16780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_16785 PF00072 Response regulator receiver domain D3C60_16785 PF00486 Transcriptional regulatory protein, C terminal D3C60_16790 PF00005 ABC transporter D3C60_16790 PF00664 ABC transporter transmembrane region D3C60_16795 PF01502 Phosphoribosyl-AMP cyclohydrolase D3C60_16795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D3C60_16800 PF00977 Histidine biosynthesis protein D3C60_16805 PF00977 Histidine biosynthesis protein D3C60_16810 PF00117 Glutamine amidotransferase class-I D3C60_16815 PF00475 Imidazoleglycerol-phosphate dehydratase D3C60_16820 PF00815 Histidinol dehydrogenase D3C60_16825 PF01634 ATP phosphoribosyltransferase D3C60_16830 PF13393 Histidyl-tRNA synthetase D3C60_16835 PF13529 Peptidase_C39 like family D3C60_16840 PF14602 Hexapeptide repeat of succinyl-transferase D3C60_16845 PF13419 Haloacid dehalogenase-like hydrolase D3C60_16850 PF01790 D3C60_16850 D3C60_16855 PF02603 HPr Serine kinase N terminus D3C60_16855 PF07475 HPr Serine kinase C-terminal domain D3C60_16860 PF01979 Amidohydrolase family D3C60_16865 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D3C60_16870 PF00392 Bacterial regulatory proteins, gntR family D3C60_16870 PF07702 UTRA domain D3C60_16875 PF00440 Bacterial regulatory proteins, tetR family D3C60_16880 PF00149 Calcineurin-like phosphoesterase D3C60_16880 PF00932 Lamin Tail Domain D3C60_16885 PF04020 D3C60_16885 D3C60_16890 PF04024 D3C60_16890 D3C60_16895 PF13349 D3C60_16895 D3C60_16910 PF00005 ABC transporter D3C60_16915 PF00271 Helicase conserved C-terminal domain D3C60_16915 PF02151 UvrB/uvrC motif D3C60_16915 PF04851 Type III restriction enzyme, res subunit D3C60_16915 PF12344 Ultra-violet resistance protein B D3C60_16920 PF09964 D3C60_16920 D3C60_16925 PF00391 PEP-utilising enzyme, mobile domain D3C60_16925 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D3C60_16930 PF00440 Bacterial regulatory proteins, tetR family D3C60_16935 PF07690 Major Facilitator Superfamily D3C60_16940 PF00975 Thioesterase domain D3C60_16945 PF12725 D3C60_16945 D3C60_16955 PF17423 D3C60_16955 D3C60_16960 PF01471 Putative peptidoglycan binding domain D3C60_16960 PF03572 Peptidase family S41 D3C60_16960 PF13180 PDZ domain D3C60_16965 PF13229 Right handed beta helix region D3C60_16970 PF02687 D3C60_16970 D3C60_16975 PF00005 ABC transporter D3C60_16980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3C60_16985 PF02588 D3C60_16985 D3C60_16985 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D3C60_16995 PF01043 SecA preprotein cross-linking domain D3C60_16995 PF02810 SEC-C motif D3C60_16995 PF07516 SecA Wing and Scaffold domain D3C60_16995 PF07517 SecA DEAD-like domain D3C60_17000 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D3C60_17000 PF16321 D3C60_17000 D3C60_17015 PF02561 Flagellar protein FliS D3C60_17020 PF02465 D3C60_17020 D3C60_17020 PF07195 D3C60_17020 D3C60_17020 PF07196 Flagellin hook IN motif D3C60_17025 PF00669 Bacterial flagellin N-terminal helical region D3C60_17025 PF00700 Bacterial flagellin C-terminal helical region D3C60_17030 PF02599 Global regulator protein family D3C60_17035 PF02623 FliW protein D3C60_17045 PF00669 Bacterial flagellin N-terminal helical region D3C60_17050 PF00460 Flagella basal body rod protein D3C60_17050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3C60_17055 PF05130 FlgN protein D3C60_17060 PF04316 Anti-sigma-28 factor, FlgM D3C60_17070 PF00156 Phosphoribosyl transferase domain D3C60_17075 PF10719 D3C60_17075 D3C60_17080 PF00271 Helicase conserved C-terminal domain D3C60_17080 PF04851 Type III restriction enzyme, res subunit D3C60_17085 PF02645 Uncharacterised protein, DegV family COG1307 D3C60_17090 PF00072 Response regulator receiver domain D3C60_17090 PF00196 Bacterial regulatory proteins, luxR family D3C60_17095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_17095 PF05384 D3C60_17095 D3C60_17095 PF07730 Histidine kinase D3C60_17100 PF01205 Uncharacterized protein family UPF0029 D3C60_17100 PF09186 Domain of unknown function (DUF1949) D3C60_17105 PF03816 Cell envelope-related transcriptional attenuator domain D3C60_17110 PF00953 Glycosyl transferase family 4 D3C60_17115 PF13692 Glycosyl transferases group 1 D3C60_17120 PF00535 Glycosyl transferase family 2 D3C60_17130 PF04932 D3C60_17130 D3C60_17135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3C60_17135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3C60_17135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3C60_17140 PF00534 Glycosyl transferases group 1 D3C60_17140 PF13439 Glycosyltransferase Family 4 D3C60_17145 PF13440 D3C60_17145 D3C60_17150 PF02397 D3C60_17150 D3C60_17155 PF01520 N-acetylmuramoyl-L-alanine amidase D3C60_17155 PF04122 D3C60_17155 D3C60_17160 PF04122 D3C60_17160 D3C60_17160 PF08486 D3C60_17160 D3C60_17170 PF03816 Cell envelope-related transcriptional attenuator domain D3C60_17180 PF02350 UDP-N-acetylglucosamine 2-epimerase D3C60_17185 PF00483 Nucleotidyl transferase D3C60_17190 PF00005 ABC transporter D3C60_17195 PF01061 D3C60_17195 D3C60_17200 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D3C60_17205 PF00535 Glycosyl transferase family 2 D3C60_17210 PF01467 Cytidylyltransferase D3C60_17215 PF03808 D3C60_17215 D3C60_17220 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D3C60_17225 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D3C60_17225 PF05036 Sporulation related domain D3C60_17225 PF08239 Bacterial SH3 domain D3C60_17230 PF01238 Phosphomannose isomerase type I D3C60_17235 PF03323 D3C60_17235 D3C60_17240 PF03845 D3C60_17240 D3C60_17245 PF05504 Spore germination B3/ GerAC like, C-terminal D3C60_17250 PF00535 Glycosyl transferase family 2 D3C60_17250 PF13489 Methyltransferase domain D3C60_17255 PF00083 Sugar (and other) transporter D3C60_17260 PF03816 Cell envelope-related transcriptional attenuator domain D3C60_17265 PF08282 haloacid dehalogenase-like hydrolase D3C60_17275 PF00877 NlpC/P60 family D3C60_17285 PF09587 Bacterial capsule synthesis protein PGA_cap D3C60_17290 PF14102 D3C60_17290 D3C60_17295 PF08245 Mur ligase middle domain D3C60_17305 PF03323 D3C60_17305 D3C60_17310 PF03845 D3C60_17310 D3C60_17315 PF05504 Spore germination B3/ GerAC like, C-terminal D3C60_17320 PF00356 Bacterial regulatory proteins, lacI family D3C60_17320 PF13377 Periplasmic binding protein-like domain D3C60_17325 PF00294 pfkB family carbohydrate kinase D3C60_17330 PF05025 RbsD / FucU transport protein family D3C60_17335 PF00005 ABC transporter D3C60_17340 PF02653 D3C60_17340 D3C60_17345 PF13407 Periplasmic binding protein domain D3C60_17350 PF08239 Bacterial SH3 domain D3C60_17355 PF02525 Flavodoxin-like fold D3C60_17360 PF03306 Alpha-acetolactate decarboxylase D3C60_17365 PF00205 Thiamine pyrophosphate enzyme, central domain D3C60_17365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3C60_17365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3C60_17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_17370 PF03466 LysR substrate binding domain D3C60_17375 PF02040 D3C60_17375 D3C60_17390 PF08757 D3C60_17390 D3C60_17400 PF01613 Flavin reductase like domain D3C60_17405 PF13789 D3C60_17405 D3C60_17410 PF01019 Gamma-glutamyltranspeptidase D3C60_17415 PF01037 AsnC family D3C60_17415 PF13404 AsnC-type helix-turn-helix domain D3C60_17420 PF02417 D3C60_17420 D3C60_17425 PF02417 D3C60_17425 D3C60_17475 PF04740 D3C60_17475 D3C60_17475 PF14449 D3C60_17475 D3C60_17480 PF17279 D3C60_17480 D3C60_17490 PF09234 Domain of unknown function (DUF1963) D3C60_17495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3C60_17495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3C60_17495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3C60_17505 PF13614 AAA domain D3C60_17510 PF02706 Chain length determinant protein D3C60_17530 PF00176 SNF2 family N-terminal domain D3C60_17530 PF00271 Helicase conserved C-terminal domain D3C60_17530 PF12419 D3C60_17530 D3C60_17535 PF08282 haloacid dehalogenase-like hydrolase D3C60_17540 PF00455 D3C60_17540 D3C60_17540 PF08220 DeoR-like helix-turn-helix domain D3C60_17545 PF00436 Single-strand binding protein family D3C60_17555 PF14183 D3C60_17555 D3C60_17560 PF01741 Large-conductance mechanosensitive channel, MscL D3C60_17565 PF07977 FabA-like domain D3C60_17570 PF13424 Tetratricopeptide repeat D3C60_17575 PF00460 Flagella basal body rod protein D3C60_17575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3C60_17580 PF00460 Flagella basal body rod protein D3C60_17580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3C60_17585 PF06723 MreB/Mbl protein D3C60_17590 PF12116 Stage III sporulation protein D D3C60_17595 PF01047 MarR family D3C60_17600 PF07690 Major Facilitator Superfamily D3C60_17605 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D3C60_17610 PF07690 Major Facilitator Superfamily D3C60_17615 PF00857 Isochorismatase family D3C60_17620 PF00909 Ammonium Transporter Family D3C60_17625 PF00543 Nitrogen regulatory protein P-II D3C60_17630 PF01098 D3C60_17630 D3C60_17635 PF01569 PAP2 superfamily D3C60_17640 PF04892 D3C60_17640 D3C60_17645 PF01551 Peptidase family M23 D3C60_17650 PF00583 Acetyltransferase (GNAT) family D3C60_17655 PF17319 D3C60_17655 D3C60_17660 PF17370 D3C60_17660 D3C60_17665 PF13091 PLD-like domain D3C60_17665 PF13396 D3C60_17665 D3C60_17670 PF17319 D3C60_17670 D3C60_17680 PF00457 Glycosyl hydrolases family 11 D3C60_17690 PF02082 Transcriptional regulator D3C60_17695 PF00449 Urease alpha-subunit, N-terminal domain D3C60_17695 PF01979 Amidohydrolase family D3C60_17700 PF00699 Urease beta subunit D3C60_17705 PF00547 Urease, gamma subunit D3C60_17710 PF05532 CsbD-like D3C60_17720 PF13424 Tetratricopeptide repeat D3C60_17725 PF04055 Radical SAM superfamily D3C60_17725 PF06463 Molybdenum Cofactor Synthesis C D3C60_17725 PF13353 4Fe-4S single cluster domain D3C60_17730 PF02634 FdhD/NarQ family D3C60_17735 PF00092 von Willebrand factor type A domain D3C60_17740 PF00092 von Willebrand factor type A domain D3C60_17750 PF08486 D3C60_17750 D3C60_17755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D3C60_17760 PF08680 Protein of unknown function (DUF1779) D3C60_17765 PF06612 D3C60_17765 D3C60_17775 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D3C60_17775 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D3C60_17780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3C60_17780 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3C60_17785 PF00231 ATP synthase D3C60_17790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3C60_17790 PF00306 ATP synthase alpha/beta chain, C terminal domain D3C60_17790 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3C60_17795 PF00213 ATP synthase delta (OSCP) subunit D3C60_17800 PF00430 ATP synthase B/B' CF(0) D3C60_17805 PF00137 ATP synthase subunit C D3C60_17810 PF00119 ATP synthase A chain D3C60_17815 PF03899 D3C60_17815 D3C60_17820 PF14681 Uracil phosphoribosyltransferase D3C60_17825 PF00464 Serine hydroxymethyltransferase D3C60_17830 PF04260 Protein of unknown function (DUF436) D3C60_17835 PF02502 Ribose/Galactose Isomerase D3C60_17840 PF01451 Low molecular weight phosphotyrosine protein phosphatase D3C60_17845 PF02659 D3C60_17845 D3C60_17850 PF01300 Telomere recombination D3C60_17850 PF03481 Putative GTP-binding controlling metal-binding D3C60_17860 PF09551 D3C60_17860 D3C60_17865 PF17094 D3C60_17865 D3C60_17870 PF17247 D3C60_17870 D3C60_17875 PF05175 Methyltransferase small domain D3C60_17880 PF00472 RF-1 domain D3C60_17880 PF03462 PCRF domain D3C60_17885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_17890 PF13411 MerR HTH family regulatory protein D3C60_17895 PF03547 D3C60_17895 D3C60_17900 PF00390 Malic enzyme, N-terminal domain D3C60_17900 PF03949 Malic enzyme, NAD binding domain D3C60_17905 PF00265 Thymidine kinase D3C60_17910 PF01197 Ribosomal protein L31 D3C60_17915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3C60_17915 PF07497 Rho termination factor, RNA-binding domain D3C60_17915 PF07498 Rho termination factor, N-terminal domain D3C60_17920 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D3C60_17925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D3C60_17935 PF00923 Transaldolase D3C60_17940 PF01116 Fructose-bisphosphate aldolase class-II D3C60_17945 PF00072 Response regulator receiver domain D3C60_17950 PF10740 Protein of unknown function (DUF2529) D3C60_17955 PF00117 Glutamine amidotransferase class-I D3C60_17955 PF06418 CTP synthase N-terminus D3C60_17960 PF05066 HB1, ASXL, restriction endonuclease HTH domain D3C60_17965 PF02754 D3C60_17965 D3C60_17965 PF13183 4Fe-4S dicluster domain D3C60_17970 PF13091 PLD-like domain D3C60_17975 PF03851 UV-endonuclease UvdE D3C60_17985 PF00005 ABC transporter D3C60_17985 PF00664 ABC transporter transmembrane region D3C60_17990 PF13091 PLD-like domain D3C60_17990 PF13396 D3C60_17990 D3C60_17995 PF02588 D3C60_17995 D3C60_18000 PF02665 Nitrate reductase gamma subunit D3C60_18005 PF02613 Nitrate reductase delta subunit D3C60_18010 PF13247 4Fe-4S dicluster domain D3C60_18010 PF14711 Respiratory nitrate reductase beta C-terminal D3C60_18015 PF00384 Molybdopterin oxidoreductase D3C60_18015 PF01568 Molydopterin dinucleotide binding domain D3C60_18015 PF14710 Respiratory nitrate reductase alpha N-terminal D3C60_18025 PF14256 D3C60_18025 D3C60_18030 PF00027 Cyclic nucleotide-binding domain D3C60_18030 PF13545 Crp-like helix-turn-helix domain D3C60_18035 PF07690 Major Facilitator Superfamily D3C60_18040 PF00750 tRNA synthetases class I (R) D3C60_18040 PF03485 Arginyl tRNA synthetase N terminal domain D3C60_18040 PF05746 DALR anticodon binding domain D3C60_18045 PF09148 Domain of unknown function (DUF1934) D3C60_18070 PF13424 Tetratricopeptide repeat D3C60_18075 PF11131 D3C60_18075 D3C60_18080 PF01381 Helix-turn-helix D3C60_18090 PF13783 D3C60_18090 D3C60_18100 PF01944 D3C60_18100 D3C60_18110 PF00196 Bacterial regulatory proteins, luxR family D3C60_18115 PF00491 Arginase family D3C60_18120 PF01564 Spermine/spermidine synthase D3C60_18120 PF17284 D3C60_18120 D3C60_18125 PF00905 Penicillin binding protein transpeptidase domain D3C60_18125 PF00912 Transglycosylase D3C60_18135 PF08741 D3C60_18135 D3C60_18140 PF02163 Peptidase family M50 D3C60_18145 PF01361 Tautomerase enzyme D3C60_18150 PF01047 MarR family D3C60_18160 PF13520 Amino acid permease D3C60_18170 PF01966 HD domain D3C60_18175 PF07293 D3C60_18175 D3C60_18185 PF03551 Transcriptional regulator PadR-like family D3C60_18190 PF08006 D3C60_18190 D3C60_18195 PF00005 ABC transporter D3C60_18200 PF12679 D3C60_18200 D3C60_18225 PF03099 Biotin/lipoate A/B protein ligase family D3C60_18230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_18230 PF03466 LysR substrate binding domain D3C60_18235 PF03601 D3C60_18235 D3C60_18240 PF01515 Phosphate acetyl/butaryl transferase D3C60_18245 PF06778 Chlorite dismutase D3C60_18250 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_18255 PF00155 Aminotransferase class I and II D3C60_18260 PF07690 Major Facilitator Superfamily D3C60_18265 PF13535 ATP-grasp domain D3C60_18270 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_18275 PF07883 Cupin domain D3C60_18285 PF07690 Major Facilitator Superfamily D3C60_18290 PF07690 Major Facilitator Superfamily D3C60_18295 PF00324 Amino acid permease D3C60_18300 PF01546 Peptidase family M20/M25/M40 D3C60_18305 PF00171 Aldehyde dehydrogenase family D3C60_18310 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3C60_18310 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D3C60_18320 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D3C60_18325 PF04321 RmlD substrate binding domain D3C60_18330 PF16363 D3C60_18330 D3C60_18335 PF00483 Nucleotidyl transferase D3C60_18340 PF04101 Glycosyltransferase family 28 C-terminal domain D3C60_18345 PF02348 Cytidylyltransferase D3C60_18350 PF03102 NeuB family D3C60_18350 PF08666 SAF domain D3C60_18355 PF00583 Acetyltransferase (GNAT) family D3C60_18360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3C60_18365 PF05159 D3C60_18365 D3C60_18370 PF00535 Glycosyl transferase family 2 D3C60_18375 PF09671 D3C60_18375 D3C60_18380 PF04241 D3C60_18380 D3C60_18385 PF00860 Permease family D3C60_18390 PF17261 D3C60_18390 D3C60_18395 PF03167 Uracil DNA glycosylase superfamily D3C60_18400 PF00535 Glycosyl transferase family 2 D3C60_18415 PF03551 Transcriptional regulator PadR-like family D3C60_18420 PF08543 Phosphomethylpyrimidine kinase D3C60_18430 PF00251 Glycosyl hydrolases family 32 N-terminal domain D3C60_18430 PF08244 Glycosyl hydrolases family 32 C terminal D3C60_18435 PF00367 phosphotransferase system, EIIB D3C60_18435 PF02378 Phosphotransferase system, EIIC D3C60_18440 PF00874 PRD domain D3C60_18440 PF03123 CAT RNA binding domain D3C60_18450 PF00082 Subtilase family D3C60_18450 PF02225 PA domain D3C60_18450 PF05922 Peptidase inhibitor I9 D3C60_18450 PF13860 FlgD Ig-like domain D3C60_18455 PF00296 Luciferase-like monooxygenase D3C60_18465 PF00881 Nitroreductase family D3C60_18470 PF01098 D3C60_18470 D3C60_18475 PF00583 Acetyltransferase (GNAT) family D3C60_18480 PF17368 D3C60_18480 D3C60_18485 PF03626 D3C60_18485 D3C60_18490 PF00510 Cytochrome c oxidase subunit III D3C60_18495 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3C60_18500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3C60_18500 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D3C60_18505 PF04226 D3C60_18505 D3C60_18510 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D3C60_18510 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D3C60_18515 PF00288 GHMP kinases N terminal domain D3C60_18515 PF08544 GHMP kinases C terminal D3C60_18515 PF10509 Galactokinase galactose-binding signature D3C60_18520 PF04138 D3C60_18520 D3C60_18525 PF00440 Bacterial regulatory proteins, tetR family D3C60_18530 PF08671 Anti-repressor SinI D3C60_18535 PF13489 Methyltransferase domain D3C60_18540 PF13712 Glycosyltransferase like family D3C60_18545 PF01323 DSBA-like thioredoxin domain D3C60_18550 PF04261 Dyp-type peroxidase family D3C60_18550 PF10518 TAT (twin-arginine translocation) pathway signal sequence D3C60_18555 PF02581 Thiamine monophosphate synthase/TENI D3C60_18560 PF02110 Hydroxyethylthiazole kinase family D3C60_18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_18565 PF03466 LysR substrate binding domain D3C60_18570 PF03788 D3C60_18570 D3C60_18575 PF04172 D3C60_18575 D3C60_18580 PF09962 D3C60_18580 D3C60_18585 PF07739 TipAS antibiotic-recognition domain D3C60_18585 PF13411 MerR HTH family regulatory protein D3C60_18590 PF10026 D3C60_18590 D3C60_18595 PF10672 S-adenosylmethionine-dependent methyltransferase D3C60_18600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_18605 PF02378 Phosphotransferase system, EIIC D3C60_18610 PF00082 Subtilase family D3C60_18615 PF01501 Glycosyl transferase family 8 D3C60_18620 PF04607 Region found in RelA / SpoT proteins D3C60_18625 PF01040 UbiA prenyltransferase family D3C60_18635 PF12459 D3C60_18635 D3C60_18640 PF00501 AMP-binding enzyme D3C60_18640 PF13193 AMP-binding enzyme C-terminal domain D3C60_18645 PF03062 D3C60_18645 D3C60_18650 PF00550 Phosphopantetheine attachment site D3C60_18655 PF04914 DltD C-terminal region D3C60_18660 PF01063 Aminotransferase class IV D3C60_18665 PF02056 Family 4 glycosyl hydrolase D3C60_18665 PF11975 Family 4 glycosyl hydrolase C-terminal domain D3C60_18670 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D3C60_18675 PF02378 Phosphotransferase system, EIIC D3C60_18680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3C60_18685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3C60_18685 PF00874 PRD domain D3C60_18685 PF05043 Mga helix-turn-helix domain D3C60_18685 PF08279 HTH domain D3C60_18690 PF02245 Methylpurine-DNA glycosylase (MPG) D3C60_18700 PF01032 FecCD transport family D3C60_18705 PF01032 FecCD transport family D3C60_18710 PF01497 Periplasmic binding protein D3C60_18715 PF01022 Bacterial regulatory protein, arsR family D3C60_18720 PF02040 D3C60_18720 D3C60_18725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3C60_18730 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D3C60_18735 PF02378 Phosphotransferase system, EIIC D3C60_18740 PF00232 Glycosyl hydrolase family 1 D3C60_18745 PF00480 ROK family D3C60_18750 PF01238 Phosphomannose isomerase type I D3C60_18755 PF02156 Glycosyl hydrolase family 26 D3C60_18760 PF00199 Catalase D3C60_18760 PF06628 Catalase-related immune-responsive D3C60_18765 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family D3C60_18770 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D3C60_18775 PF01256 Carbohydrate kinase D3C60_18780 PF00005 ABC transporter D3C60_18780 PF00664 ABC transporter transmembrane region D3C60_18785 PF00005 ABC transporter D3C60_18785 PF00664 ABC transporter transmembrane region D3C60_18790 PF02322 D3C60_18790 D3C60_18795 PF01654 D3C60_18795 D3C60_18800 PF03390 D3C60_18800 D3C60_18805 PF01522 Polysaccharide deacetylase D3C60_18810 PF00005 ABC transporter D3C60_18810 PF03459 TOBE domain D3C60_18815 PF13556 PucR C-terminal helix-turn-helix domain D3C60_18820 PF02588 D3C60_18820 D3C60_18820 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D3C60_18825 PF11611 Domain of unknown function (DUF4352) D3C60_18830 PF16363 D3C60_18830 D3C60_18835 PF01546 Peptidase family M20/M25/M40 D3C60_18835 PF07687 Peptidase dimerisation domain D3C60_18840 PF04525 Tubby C 2 D3C60_18845 PF01717 Cobalamin-independent synthase, Catalytic domain D3C60_18850 PF13649 Methyltransferase domain D3C60_18855 PF01773 Na+ dependent nucleoside transporter N-terminus D3C60_18855 PF07662 Na+ dependent nucleoside transporter C-terminus D3C60_18860 PF11738 Protein of unknown function (DUF3298) D3C60_18860 PF13739 Domain of unknown function (DUF4163) D3C60_18870 PF00199 Catalase D3C60_18870 PF01965 DJ-1/PfpI family D3C60_18870 PF06628 Catalase-related immune-responsive D3C60_18875 PF03600 Citrate transporter D3C60_18880 PF00722 Glycosyl hydrolases family 16 D3C60_18885 PF00874 PRD domain D3C60_18885 PF03123 CAT RNA binding domain D3C60_18890 PF11700 D3C60_18890 D3C60_18895 PF00270 DEAD/DEAH box helicase D3C60_18895 PF00271 Helicase conserved C-terminal domain D3C60_18895 PF03880 DbpA RNA binding domain D3C60_18910 PF14176 D3C60_18910 D3C60_18935 PF05593 D3C60_18935 D3C60_18940 PF00544 Pectate lyase D3C60_18945 PF00892 EamA-like transporter family D3C60_18955 PF00232 Glycosyl hydrolase family 1 D3C60_18960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D3C60_18960 PF00367 phosphotransferase system, EIIB D3C60_18960 PF02378 Phosphotransferase system, EIIC D3C60_18970 PF00271 Helicase conserved C-terminal domain D3C60_18970 PF04851 Type III restriction enzyme, res subunit D3C60_18970 PF11907 D3C60_18970 D3C60_18970 PF13091 PLD-like domain D3C60_18975 PF00293 NUDIX domain D3C60_18980 PF04616 Glycosyl hydrolases family 43 D3C60_18980 PF16369 D3C60_18980 D3C60_18985 PF09021 HutP D3C60_18990 PF00221 Aromatic amino acid lyase D3C60_18995 PF01175 Urocanase D3C60_18995 PF17391 D3C60_18995 D3C60_18995 PF17392 D3C60_18995 D3C60_19000 PF01979 Amidohydrolase family D3C60_19005 PF00491 Arginase family D3C60_19010 PF00324 Amino acid permease D3C60_19015 PF00591 Glycosyl transferase family, a/b domain D3C60_19015 PF02885 Glycosyl transferase family, helical bundle domain D3C60_19015 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D3C60_19020 PF01773 Na+ dependent nucleoside transporter N-terminus D3C60_19020 PF07662 Na+ dependent nucleoside transporter C-terminus D3C60_19025 PF01791 DeoC/LacD family aldolase D3C60_19030 PF04198 Putative sugar-binding domain D3C60_19030 PF12802 MarR family D3C60_19035 PF08282 haloacid dehalogenase-like hydrolase D3C60_19045 PF11631 Protein of unknown function (DUF3255) D3C60_19065 PF01497 Periplasmic binding protein D3C60_19070 PF06486 Protein of unknown function (DUF1093) D3C60_19075 PF02687 D3C60_19075 D3C60_19080 PF00005 ABC transporter D3C60_19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_19090 PF00072 Response regulator receiver domain D3C60_19090 PF00486 Transcriptional regulatory protein, C terminal D3C60_19095 PF01116 Fructose-bisphosphate aldolase class-II D3C60_19100 PF01261 Xylose isomerase-like TIM barrel D3C60_19105 PF01261 Xylose isomerase-like TIM barrel D3C60_19110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3C60_19110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3C60_19115 PF07690 Major Facilitator Superfamily D3C60_19120 PF01261 Xylose isomerase-like TIM barrel D3C60_19125 PF00205 Thiamine pyrophosphate enzyme, central domain D3C60_19125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3C60_19125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3C60_19130 PF00294 pfkB family carbohydrate kinase D3C60_19135 PF04962 KduI/IolB family D3C60_19140 PF00171 Aldehyde dehydrogenase family D3C60_19145 PF00455 D3C60_19145 D3C60_19145 PF08220 DeoR-like helix-turn-helix domain D3C60_19150 PF00248 Aldo/keto reductase family D3C60_19155 PF00083 Sugar (and other) transporter D3C60_19160 PF00183 Hsp90 protein D3C60_19160 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_19170 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_19175 PF00072 Response regulator receiver domain D3C60_19175 PF00196 Bacterial regulatory proteins, luxR family D3C60_19180 PF07730 Histidine kinase D3C60_19185 PF00487 D3C60_19185 D3C60_19195 PF00440 Bacterial regulatory proteins, tetR family D3C60_19200 PF00171 Aldehyde dehydrogenase family D3C60_19205 PF13360 PQQ-like domain D3C60_19205 PF13570 PQQ-like domain D3C60_19210 PF17369 D3C60_19210 D3C60_19220 PF07690 Major Facilitator Superfamily D3C60_19225 PF06271 D3C60_19225 D3C60_19230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_19235 PF00578 AhpC/TSA family D3C60_19235 PF10417 C-terminal domain of 1-Cys peroxiredoxin D3C60_19240 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3C60_19240 PF13192 Thioredoxin domain D3C60_19245 PF02661 Fic/DOC family D3C60_19250 PF00324 Amino acid permease D3C60_19255 PF06874 D3C60_19255 D3C60_19260 PF00111 2Fe-2S iron-sulfur cluster binding domain D3C60_19260 PF01799 [2Fe-2S] binding domain D3C60_19265 PF00941 FAD binding domain in molybdopterin dehydrogenase D3C60_19270 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3C60_19270 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3C60_19275 PF12804 MobA-like NTP transferase domain D3C60_19280 PF02625 XdhC and CoxI family D3C60_19280 PF13478 XdhC Rossmann domain D3C60_19285 PF06081 D3C60_19285 D3C60_19300 PF13086 AAA domain D3C60_19300 PF13087 AAA domain D3C60_19305 PF00656 Caspase domain D3C60_19310 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D3C60_19320 PF02590 Predicted SPOUT methyltransferase D3C60_19325 PF14116 D3C60_19325 D3C60_19345 PF00248 Aldo/keto reductase family D3C60_19350 PF00583 Acetyltransferase (GNAT) family D3C60_19360 PF00491 Arginase family D3C60_19365 PF00324 Amino acid permease D3C60_19370 PF00202 Aminotransferase class-III D3C60_19375 PF07853 D3C60_19375 D3C60_19375 PF13630 D3C60_19375 D3C60_19380 PF01022 Bacterial regulatory protein, arsR family D3C60_19385 PF00158 Sigma-54 interaction domain D3C60_19385 PF02954 Bacterial regulatory protein, Fis family D3C60_19385 PF13426 PAS domain D3C60_19390 PF13621 Cupin-like domain D3C60_19395 PF00005 ABC transporter D3C60_19395 PF12848 ABC transporter D3C60_19400 PF07690 Major Facilitator Superfamily D3C60_19410 PF00899 ThiF family D3C60_19415 PF00512 His Kinase A (phospho-acceptor) domain D3C60_19415 PF00672 HAMP domain D3C60_19415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_19420 PF00486 Transcriptional regulatory protein, C terminal D3C60_19425 PF13180 PDZ domain D3C60_19425 PF13365 Trypsin-like peptidase domain D3C60_19430 PF00753 Metallo-beta-lactamase superfamily D3C60_19435 PF09648 YycH protein D3C60_19440 PF07435 YycH protein D3C60_19445 PF00512 His Kinase A (phospho-acceptor) domain D3C60_19445 PF00672 HAMP domain D3C60_19445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3C60_19445 PF13426 PAS domain D3C60_19450 PF00072 Response regulator receiver domain D3C60_19450 PF00486 Transcriptional regulatory protein, C terminal D3C60_19480 PF00709 Adenylosuccinate synthetase D3C60_19485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_19490 PF00772 DnaB-like helicase N terminal domain D3C60_19490 PF03796 DnaB-like helicase C terminal domain D3C60_19500 PF09954 D3C60_19500 D3C60_19510 PF14174 D3C60_19510 D3C60_19520 PF00534 Glycosyl transferases group 1 D3C60_19520 PF13439 Glycosyltransferase Family 4 D3C60_19525 PF02958 Ecdysteroid kinase D3C60_19530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3C60_19535 PF00534 Glycosyl transferases group 1 D3C60_19535 PF13439 Glycosyltransferase Family 4 D3C60_19540 PF02585 GlcNAc-PI de-N-acetylase D3C60_19550 PF01281 Ribosomal protein L9, N-terminal domain D3C60_19550 PF03948 Ribosomal protein L9, C-terminal domain D3C60_19555 PF01368 DHH family D3C60_19555 PF02272 DHHA1 domain D3C60_19560 PF09991 D3C60_19560 D3C60_19570 PF07875 D3C60_19570 D3C60_19575 PF01638 HxlR-like helix-turn-helix D3C60_19580 PF01368 DHH family D3C60_19580 PF02833 DHHA2 domain D3C60_19590 PF00892 EamA-like transporter family D3C60_19595 PF02435 Levansucrase/Invertase D3C60_19600 PF00251 Glycosyl hydrolases family 32 N-terminal domain D3C60_19600 PF08244 Glycosyl hydrolases family 32 C terminal D3C60_19605 PF00392 Bacterial regulatory proteins, gntR family D3C60_19605 PF07729 FCD domain D3C60_19610 PF05163 DinB family D3C60_19615 PF07690 Major Facilitator Superfamily D3C60_19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_19620 PF03466 LysR substrate binding domain D3C60_19625 PF01810 D3C60_19625 D3C60_19630 PF06993 D3C60_19630 D3C60_19635 PF00881 Nitroreductase family D3C60_19640 PF01047 MarR family D3C60_19645 PF02588 D3C60_19645 D3C60_19645 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D3C60_19650 PF01047 MarR family D3C60_19655 PF13673 Acetyltransferase (GNAT) domain D3C60_19660 PF07485 D3C60_19660 D3C60_19665 PF02627 Carboxymuconolactone decarboxylase family D3C60_19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3C60_19670 PF03466 LysR substrate binding domain D3C60_19675 PF13561 Enoyl-(Acyl carrier protein) reductase D3C60_19680 PF00155 Aminotransferase class I and II D3C60_19680 PF00392 Bacterial regulatory proteins, gntR family D3C60_19685 PF00892 EamA-like transporter family D3C60_19690 PF03190 Protein of unknown function, DUF255 D3C60_19695 PF13787 D3C60_19695 D3C60_19700 PF01966 HD domain D3C60_19710 PF03641 Possible lysine decarboxylase D3C60_19715 PF03190 Protein of unknown function, DUF255 D3C60_19715 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) D3C60_19720 PF02517 CAAX protease self-immunity D3C60_19725 PF00083 Sugar (and other) transporter D3C60_19730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3C60_19735 PF00356 Bacterial regulatory proteins, lacI family D3C60_19735 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3C60_19740 PF03372 Endonuclease/Exonuclease/phosphatase family D3C60_19745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3C60_19745 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D3C60_19750 PF02805 Metal binding domain of Ada D3C60_19750 PF12833 Helix-turn-helix domain D3C60_19755 PF01084 Ribosomal protein S18 D3C60_19760 PF00436 Single-strand binding protein family D3C60_19765 PF01250 Ribosomal protein S6 D3C60_19770 PF01926 50S ribosome-binding GTPase D3C60_19770 PF06071 Protein of unknown function (DUF933) D3C60_19775 PF00384 Molybdopterin oxidoreductase D3C60_19775 PF01568 Molydopterin dinucleotide binding domain D3C60_19775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3C60_19780 PF06107 D3C60_19780 D3C60_19790 PF00583 Acetyltransferase (GNAT) family D3C60_19795 PF06866 D3C60_19795 D3C60_19800 PF02195 ParB-like nuclease domain D3C60_19805 PF13614 AAA domain D3C60_19810 PF02195 ParB-like nuclease domain D3C60_19815 PF02527 rRNA small subunit methyltransferase G D3C60_19820 PF01134 Glucose inhibited division protein A D3C60_19820 PF13932 GidA associated domain 3 D3C60_19825 PF01926 50S ribosome-binding GTPase D3C60_19825 PF10396 GTP-binding protein TrmE N-terminus D3C60_19825 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE D3C60_19830 PF01424 R3H domain D3C60_19830 PF13083 KH domain D3C60_19830 PF14804 Jag N-terminus D3C60_19835 PF02096 60Kd inner membrane protein D3C60_19840 PF00825 Ribonuclease P D3C60_19845 PF00468 Ribosomal protein L34