D3C60_00005 SM00382 ATPases associated with a variety of cellular activities D3C60_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain D3C60_00010 SM00480 DNA polymerase III beta subunit D3C60_00030 SM00387 Histidine kinase-like ATPases D3C60_00030 SM00433 TopoisomeraseII D3C60_00035 SM00434 DNA Topoisomerase IV D3C60_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_00070 SM01240 D3C60_00070 D3C60_00075 SM00936 Penicillin-binding protein 5, C-terminal domain D3C60_00115 SM00257 Lysin motif D3C60_00115 SM00636 D3C60_00115 D3C60_00135 SM00382 ATPases associated with a variety of cellular activities D3C60_00145 SM00493 D3C60_00145 D3C60_00240 SM00465 GIY-YIG type nucleases (URI domain) D3C60_00250 SM00966 SpoVT / AbrB like domain D3C60_00265 SM01208 D3C60_00265 D3C60_00270 SM00493 D3C60_00270 D3C60_00275 SM00650 Ribosomal RNA adenine dimethylases D3C60_00320 SM01400 D3C60_00320 D3C60_00340 SM00487 DEAD-like helicases superfamily D3C60_00340 SM00490 helicase superfamily c-terminal domain D3C60_00340 SM00982 D3C60_00340 D3C60_00340 SM01058 CarD-like/TRCF domain D3C60_00345 SM00966 SpoVT / AbrB like domain D3C60_00360 SM00363 S4 RNA-binding domain D3C60_00380 SM00316 Ribosomal protein S1-like RNA-binding domain D3C60_00395 SM00331 Sigma factor PP2C-like phosphatases D3C60_00395 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain D3C60_00405 SM00220 Serine/Threonine protein kinases, catalytic domain D3C60_00410 SM00977 TilS substrate C-terminal domain D3C60_00420 SM00382 ATPases associated with a variety of cellular activities D3C60_00465 SM00905 Dihydroneopterin aldolase D3C60_00475 SM00530 Helix-turn-helix XRE-family like proteins D3C60_00580 SM00382 ATPases associated with a variety of cellular activities D3C60_00580 SM01086 C-terminal, D2-small domain, of ClpB protein D3C60_00585 SM00382 ATPases associated with a variety of cellular activities D3C60_00595 SM00670 Large family of predicted nucleotide-binding domains D3C60_00620 SM00840 D3C60_00620 D3C60_00625 SM00535 Ribonuclease III family D3C60_00630 SM00967 RNA 2'-O ribose methyltransferase substrate binding D3C60_00655 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. D3C60_00655 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. D3C60_00660 SM00649 Ribosomal protein L11/L12 D3C60_00690 SM00663 RNA polymerase I subunit A N-terminus D3C60_00710 SM00838 Elongation factor G C-terminus D3C60_00710 SM00889 Elongation factor G, domain IV D3C60_00725 SM01403 D3C60_00725 D3C60_00745 SM01382 D3C60_00745 D3C60_00745 SM01383 D3C60_00745 D3C60_00760 SM00322 K homology RNA-binding domain D3C60_00780 SM01374 D3C60_00780 D3C60_00785 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. D3C60_00850 SM00316 Ribosomal protein S1-like RNA-binding domain D3C60_00870 SM00662 RNA polymerases D D3C60_00880 SM00382 ATPases associated with a variety of cellular activities D3C60_00885 SM00382 ATPases associated with a variety of cellular activities D3C60_00925 SM00646 D3C60_00925 D3C60_00940 SM01251 D3C60_00940 D3C60_01020 SM00829 Enoylreductase D3C60_01055 SM00342 helix_turn_helix, arabinose operon control protein D3C60_01150 SM00382 ATPases associated with a variety of cellular activities D3C60_01160 SM00220 Serine/Threonine protein kinases, catalytic domain D3C60_01160 SM01260 D3C60_01160 D3C60_01185 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_01205 SM00421 helix_turn_helix, Lux Regulon D3C60_01205 SM00448 cheY-homologous receiver domain D3C60_01210 SM00382 ATPases associated with a variety of cellular activities D3C60_01310 SM00530 Helix-turn-helix XRE-family like proteins D3C60_01345 SM00450 Rhodanese Homology Domain D3C60_01380 SM00387 Histidine kinase-like ATPases D3C60_01385 SM00448 cheY-homologous receiver domain D3C60_01480 SM00870 D3C60_01480 D3C60_01520 SM00028 Tetratricopeptide repeats D3C60_01530 SM00642 Alpha-amylase domain D3C60_01540 SM00382 ATPases associated with a variety of cellular activities D3C60_01590 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_01590 SM00382 ATPases associated with a variety of cellular activities D3C60_01620 SM00632 D3C60_01620 D3C60_01620 SM00642 Alpha-amylase domain D3C60_01635 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_01735 SM00926 Molybdopterin oxidoreductase Fe4S4 domain D3C60_01750 SM00833 Cobalamin synthesis protein cobW C-terminal domain D3C60_01790 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family D3C60_01805 SM00823 Phosphopantetheine attachment site D3C60_01810 SM00823 Phosphopantetheine attachment site D3C60_01815 SM00823 Phosphopantetheine attachment site D3C60_01840 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_01855 SM00382 ATPases associated with a variety of cellular activities D3C60_01865 SM00062 Bacterial periplasmic substrate-binding proteins D3C60_01900 SM00710 Parallel beta-helix repeats D3C60_01900 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses D3C60_01935 SM00062 Bacterial periplasmic substrate-binding proteins D3C60_01945 SM00382 ATPases associated with a variety of cellular activities D3C60_01960 SM00382 ATPases associated with a variety of cellular activities D3C60_01970 SM00448 cheY-homologous receiver domain D3C60_01970 SM00862 Transcriptional regulatory protein, C terminal D3C60_01975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_01975 SM00387 Histidine kinase-like ATPases D3C60_01975 SM00388 His Kinase A (phosphoacceptor) domain D3C60_01980 SM00028 Tetratricopeptide repeats D3C60_02010 SM00382 ATPases associated with a variety of cellular activities D3C60_02040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor D3C60_02045 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_02080 SM00420 helix_turn_helix, Deoxyribose operon repressor D3C60_02135 SM00796 Allophanate hydrolase subunit 1 D3C60_02140 SM00797 Allophanate hydrolase subunit 2 D3C60_02145 SM00346 helix_turn_helix isocitrate lyase regulation D3C60_02220 SM00344 helix_turn_helix ASNC type D3C60_02225 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain D3C60_02225 SM00437 Bacterial DNA topoisomerase I DNA-binding domain D3C60_02225 SM00493 D3C60_02225 D3C60_02235 SM00267 diguanylate cyclase D3C60_02385 SM00091 PAS domain D3C60_02385 SM00387 Histidine kinase-like ATPases D3C60_02390 SM00448 cheY-homologous receiver domain D3C60_02405 SM00382 ATPases associated with a variety of cellular activities D3C60_02455 SM00487 DEAD-like helicases superfamily D3C60_02455 SM00490 helicase superfamily c-terminal domain D3C60_02485 SM01005 Alanine racemase, C-terminal domain D3C60_02510 SM00387 Histidine kinase-like ATPases D3C60_02515 SM00331 Sigma factor PP2C-like phosphatases D3C60_02535 SM00331 Sigma factor PP2C-like phosphatases D3C60_02535 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain D3C60_02540 SM00316 Ribosomal protein S1-like RNA-binding domain D3C60_02540 SM00732 Likely ribonuclease with RNase H fold. D3C60_02550 SM00731 SprT homologues. D3C60_02645 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_02685 SM00822 D3C60_02685 D3C60_02690 SM00829 Enoylreductase D3C60_02705 SM00357 Cold shock protein domain D3C60_02710 SM01058 CarD-like/TRCF domain D3C60_02730 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_02790 SM01130 D3C60_02790 D3C60_02840 SM00829 Enoylreductase D3C60_02845 SM00422 helix_turn_helix, mercury resistance D3C60_02855 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_02885 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_02920 SM00382 ATPases associated with a variety of cellular activities D3C60_02945 SM00825 Beta-ketoacyl synthase D3C60_02950 SM00530 Helix-turn-helix XRE-family like proteins D3C60_02965 SM00422 helix_turn_helix, mercury resistance D3C60_02985 SM01329 D3C60_02985 D3C60_02990 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_02990 SM00895 D3C60_02990 D3C60_03025 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_03025 SM00866 D3C60_03025 D3C60_03030 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_03030 SM00895 D3C60_03030 D3C60_03070 SM00829 Enoylreductase D3C60_03140 SM00382 ATPases associated with a variety of cellular activities D3C60_03150 SM00881 CoA binding domain D3C60_03175 SM00883 Chaperonin 10 Kd subunit D3C60_03195 SM00487 DEAD-like helicases superfamily D3C60_03210 SM00028 Tetratricopeptide repeats D3C60_03210 SM00382 ATPases associated with a variety of cellular activities D3C60_03215 SM00829 Enoylreductase D3C60_03270 SM00829 Enoylreductase D3C60_03315 SM00460 Transglutaminase/protease-like homologues D3C60_03365 SM01001 AIR carboxylase D3C60_03375 SM00998 Adenylosuccinate lyase C-terminus D3C60_03390 SM01211 D3C60_03390 D3C60_03415 SM00798 AICARFT/IMPCHase bienzyme D3C60_03415 SM00851 MGS-like domain D3C60_03420 SM01209 D3C60_03420 D3C60_03420 SM01210 D3C60_03420 D3C60_03465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 D3C60_03465 SM00292 breast cancer carboxy-terminal domain D3C60_03465 SM00532 Ligase N family D3C60_03500 SM00845 GatB domain D3C60_03515 SM00046 Diacylglycerol kinase catalytic domain (presumed) D3C60_03645 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_03710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D3C60_03725 SM00382 ATPases associated with a variety of cellular activities D3C60_03730 SM00422 helix_turn_helix, mercury resistance D3C60_03740 SM00382 ATPases associated with a variety of cellular activities D3C60_03745 SM00487 DEAD-like helicases superfamily D3C60_03745 SM00490 helicase superfamily c-terminal domain D3C60_03755 SM00829 Enoylreductase D3C60_03770 SM00656 D3C60_03770 D3C60_03800 SM00091 PAS domain D3C60_03800 SM00387 Histidine kinase-like ATPases D3C60_03805 SM00448 cheY-homologous receiver domain D3C60_03820 SM00849 Metallo-beta-lactamase superfamily D3C60_03900 SM00642 Alpha-amylase domain D3C60_03905 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_03905 SM00866 D3C60_03905 D3C60_03935 SM00354 helix_turn _helix lactose operon repressor D3C60_03960 SM00226 Low molecular weight phosphatase family D3C60_04025 SM00478 endonuclease III D3C60_04060 SM00861 Transketolase, pyrimidine binding domain D3C60_04075 SM00382 ATPases associated with a variety of cellular activities D3C60_04100 SM00382 ATPases associated with a variety of cellular activities D3C60_04105 SM00382 ATPases associated with a variety of cellular activities D3C60_04165 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_04235 SM00287 Bacterial SH3 domain homologues D3C60_04265 SM00478 endonuclease III D3C60_04265 SM00525 D3C60_04265 D3C60_04295 SM00382 ATPases associated with a variety of cellular activities D3C60_04465 SM00382 ATPases associated with a variety of cellular activities D3C60_04470 SM00382 ATPases associated with a variety of cellular activities D3C60_04475 SM01060 D3C60_04475 D3C60_04485 SM00382 ATPases associated with a variety of cellular activities D3C60_04490 SM00062 Bacterial periplasmic substrate-binding proteins D3C60_04515 SM00530 Helix-turn-helix XRE-family like proteins D3C60_04530 SM00567 E-Z type HEAT repeats D3C60_04565 SM00763 PrkA AAA domain D3C60_04580 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_04610 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_04615 SM00382 ATPases associated with a variety of cellular activities D3C60_04620 SM00382 ATPases associated with a variety of cellular activities D3C60_04630 SM00357 Cold shock protein domain D3C60_04645 SM00267 diguanylate cyclase D3C60_04695 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_04745 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. D3C60_04745 SM00387 Histidine kinase-like ATPases D3C60_04750 SM00421 helix_turn_helix, Lux Regulon D3C60_04750 SM00448 cheY-homologous receiver domain D3C60_04770 SM00257 Lysin motif D3C60_04790 SM00098 Alkaline phosphatase homologues D3C60_04795 SM00257 Lysin motif D3C60_04840 SM00563 Phosphate acyltransferases D3C60_04845 SM01091 Transporter associated domain D3C60_04850 SM00422 helix_turn_helix, mercury resistance D3C60_04860 SM00825 Beta-ketoacyl synthase D3C60_04865 SM01091 Transporter associated domain D3C60_04925 SM00382 ATPases associated with a variety of cellular activities D3C60_04930 SM00382 ATPases associated with a variety of cellular activities D3C60_04985 SM00729 Elongator protein 3, MiaB family, Radical SAM D3C60_05020 SM00382 ATPases associated with a variety of cellular activities D3C60_05040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D3C60_05085 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_05115 SM00382 ATPases associated with a variety of cellular activities D3C60_05200 SM00849 Metallo-beta-lactamase superfamily D3C60_05245 SM00855 Phosphoglycerate mutase family D3C60_05265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D3C60_05280 SM00914 D3C60_05280 D3C60_05310 SM00894 Excalibur calcium-binding domain D3C60_05350 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_05475 SM00342 helix_turn_helix, arabinose operon control protein D3C60_05510 SM00316 Ribosomal protein S1-like RNA-binding domain D3C60_05520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D3C60_05520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_05585 SM00859 Semialdehyde dehydrogenase, NAD binding domain D3C60_05605 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain D3C60_05610 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D3C60_05665 SM00825 Beta-ketoacyl synthase D3C60_05675 SM00382 ATPases associated with a variety of cellular activities D3C60_05680 SM00382 ATPases associated with a variety of cellular activities D3C60_05725 SM00382 ATPases associated with a variety of cellular activities D3C60_05730 SM00382 ATPases associated with a variety of cellular activities D3C60_05785 SM01118 D3C60_05785 D3C60_05795 SM00954 Region found in RelA / SpoT proteins D3C60_05925 SM00849 Metallo-beta-lactamase superfamily D3C60_05935 SM00382 ATPases associated with a variety of cellular activities D3C60_05940 SM00966 SpoVT / AbrB like domain D3C60_06040 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_06080 SM00420 helix_turn_helix, Deoxyribose operon repressor D3C60_06080 SM01134 D3C60_06080 D3C60_06095 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_06130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain D3C60_06130 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3C60_06165 SM00382 ATPases associated with a variety of cellular activities D3C60_06200 SM00354 helix_turn _helix lactose operon repressor D3C60_06210 SM00858 D3C60_06210 D3C60_06225 SM00028 Tetratricopeptide repeats D3C60_06230 SM00257 Lysin motif D3C60_06230 SM00644 D3C60_06230 D3C60_06250 SM00530 Helix-turn-helix XRE-family like proteins D3C60_06265 SM00382 ATPases associated with a variety of cellular activities D3C60_06360 SM00257 Lysin motif D3C60_06425 SM00257 Lysin motif D3C60_06425 SM00644 D3C60_06425 D3C60_06470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D3C60_06495 SM00382 ATPases associated with a variety of cellular activities D3C60_06510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain D3C60_06520 SM00382 ATPases associated with a variety of cellular activities D3C60_06560 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase D3C60_06575 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_06595 SM00028 Tetratricopeptide repeats D3C60_06610 SM00100 Cyclic nucleotide-monophosphate binding domain D3C60_06635 SM00382 ATPases associated with a variety of cellular activities D3C60_06645 SM00257 Lysin motif D3C60_06645 SM00636 D3C60_06645 D3C60_06665 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_06665 SM00924 MgtE intracellular N domain D3C60_06670 SM00422 helix_turn_helix, mercury resistance D3C60_06685 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_06700 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen D3C60_06760 SM00091 PAS domain D3C60_06760 SM00387 Histidine kinase-like ATPases D3C60_06760 SM00388 His Kinase A (phosphoacceptor) domain D3C60_06800 SM01007 Class II Aldolase and Adducin N-terminal domain D3C60_06815 SM00387 Histidine kinase-like ATPases D3C60_06815 SM00388 His Kinase A (phosphoacceptor) domain D3C60_06820 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_06835 SM00382 ATPases associated with a variety of cellular activities D3C60_06835 SM01086 C-terminal, D2-small domain, of ClpB protein D3C60_06880 SM00822 D3C60_06880 D3C60_06890 SM00257 Lysin motif D3C60_06895 SM00257 Lysin motif D3C60_06900 SM00636 D3C60_06900 D3C60_06950 SM00354 helix_turn _helix lactose operon repressor D3C60_06955 SM01061 CAT RNA binding domain D3C60_06985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D3C60_06985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_07005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) D3C60_07005 SM00091 PAS domain D3C60_07005 SM00387 Histidine kinase-like ATPases D3C60_07005 SM00388 His Kinase A (phosphoacceptor) domain D3C60_07020 SM00260 Two component signalling adaptor domain D3C60_07020 SM00448 cheY-homologous receiver domain D3C60_07035 SM00257 Lysin motif D3C60_07055 SM00052 Putative diguanylate phosphodiesterase D3C60_07145 SM00852 Probable molybdopterin binding domain D3C60_07175 SM00382 ATPases associated with a variety of cellular activities D3C60_07180 SM01066 Carbohydrate binding domain D3C60_07185 SM00420 helix_turn_helix, Deoxyribose operon repressor D3C60_07185 SM01134 D3C60_07185 D3C60_07210 SM00382 ATPases associated with a variety of cellular activities D3C60_07240 SM00966 SpoVT / AbrB like domain D3C60_07245 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) D3C60_07245 SM00091 PAS domain D3C60_07245 SM00387 Histidine kinase-like ATPases D3C60_07245 SM00388 His Kinase A (phosphoacceptor) domain D3C60_07270 SM00849 Metallo-beta-lactamase superfamily D3C60_07305 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. D3C60_07310 SM00822 D3C60_07310 D3C60_07310 SM00823 Phosphopantetheine attachment site D3C60_07310 SM00825 Beta-ketoacyl synthase D3C60_07310 SM00826 D3C60_07310 D3C60_07310 SM01294 D3C60_07310 D3C60_07315 SM00822 D3C60_07315 D3C60_07315 SM00823 Phosphopantetheine attachment site D3C60_07315 SM00825 Beta-ketoacyl synthase D3C60_07315 SM00826 D3C60_07315 D3C60_07320 SM00822 D3C60_07320 D3C60_07320 SM00823 Phosphopantetheine attachment site D3C60_07320 SM00825 Beta-ketoacyl synthase D3C60_07320 SM01294 D3C60_07320 D3C60_07325 SM00822 D3C60_07325 D3C60_07325 SM00823 Phosphopantetheine attachment site D3C60_07325 SM00825 Beta-ketoacyl synthase D3C60_07325 SM01294 D3C60_07325 D3C60_07330 SM00822 D3C60_07330 D3C60_07330 SM00823 Phosphopantetheine attachment site D3C60_07330 SM00825 Beta-ketoacyl synthase D3C60_07330 SM01294 D3C60_07330 D3C60_07335 SM00822 D3C60_07335 D3C60_07335 SM00823 Phosphopantetheine attachment site D3C60_07335 SM00825 Beta-ketoacyl synthase D3C60_07335 SM01294 D3C60_07335 D3C60_07340 SM00822 D3C60_07340 D3C60_07340 SM00823 Phosphopantetheine attachment site D3C60_07340 SM01294 D3C60_07340 D3C60_07355 SM00861 Transketolase, pyrimidine binding domain D3C60_07445 SM00838 Elongation factor G C-terminus D3C60_07465 SM00670 Large family of predicted nucleotide-binding domains D3C60_07490 SM00878 Biotin carboxylase C-terminal domain D3C60_07540 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_07650 SM00740 D3C60_07650 D3C60_07655 SM00740 D3C60_07655 D3C60_07695 SM00842 Cell division protein FtsA D3C60_07700 SM00864 Tubulin/FtsZ family, GTPase domain D3C60_07700 SM00865 Tubulin/FtsZ family, C-terminal domain D3C60_07725 SM00382 ATPases associated with a variety of cellular activities D3C60_07760 SM00363 S4 RNA-binding domain D3C60_07790 SM00363 S4 RNA-binding domain D3C60_07815 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain D3C60_07820 SM00851 MGS-like domain D3C60_07820 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D3C60_07820 SM01209 D3C60_07820 D3C60_07835 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family D3C60_07890 SM00831 Cation transporter/ATPase, N-terminus D3C60_07905 SM00072 Guanylate kinase homologues. D3C60_07910 SM01409 D3C60_07910 D3C60_07920 SM00487 DEAD-like helicases superfamily D3C60_07920 SM00490 helicase superfamily c-terminal domain D3C60_07945 SM00331 Sigma factor PP2C-like phosphatases D3C60_07945 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain D3C60_07950 SM00220 Serine/Threonine protein kinases, catalytic domain D3C60_07950 SM00740 D3C60_07950 D3C60_07965 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain D3C60_07985 SM01120 D3C60_07985 D3C60_07985 SM01121 D3C60_07985 D3C60_08000 SM00487 DEAD-like helicases superfamily D3C60_08000 SM00490 helicase superfamily c-terminal domain D3C60_08015 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. D3C60_08020 SM00822 D3C60_08020 D3C60_08030 SM00358 Double-stranded RNA binding motif D3C60_08030 SM00535 Ribonuclease III family D3C60_08035 SM00968 SMC proteins Flexible Hinge Domain D3C60_08040 SM00382 ATPases associated with a variety of cellular activities D3C60_08040 SM00962 SRP54-type protein, GTPase domain D3C60_08040 SM00963 SRP54-type protein, helical bundle domain D3C60_08055 SM00382 ATPases associated with a variety of cellular activities D3C60_08055 SM00962 SRP54-type protein, GTPase domain D3C60_08055 SM00963 SRP54-type protein, helical bundle domain D3C60_08115 SM00881 CoA binding domain D3C60_08125 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain D3C60_08125 SM00437 Bacterial DNA topoisomerase I DNA-binding domain D3C60_08125 SM00493 D3C60_08125 D3C60_08145 SM00382 ATPases associated with a variety of cellular activities D3C60_08145 SM01086 C-terminal, D2-small domain, of ClpB protein D3C60_08185 SM00382 ATPases associated with a variety of cellular activities D3C60_08235 SM00448 cheY-homologous receiver domain D3C60_08270 SM00962 SRP54-type protein, GTPase domain D3C60_08280 SM00448 cheY-homologous receiver domain D3C60_08285 SM00073 Histidine Phosphotransfer domain D3C60_08285 SM00260 Two component signalling adaptor domain D3C60_08285 SM00387 Histidine kinase-like ATPases D3C60_08285 SM01231 D3C60_08285 D3C60_08290 SM00260 Two component signalling adaptor domain D3C60_08350 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D3C60_08360 SM00479 D3C60_08360 D3C60_08360 SM00481 DNA polymerase alpha chain like domain D3C60_08370 SM00316 Ribosomal protein S1-like RNA-binding domain D3C60_08370 SM00322 K homology RNA-binding domain D3C60_08405 SM00904 Riboflavin kinase D3C60_08410 SM01387 D3C60_08410 D3C60_08415 SM00316 Ribosomal protein S1-like RNA-binding domain D3C60_08415 SM00322 K homology RNA-binding domain D3C60_08445 SM00859 Semialdehyde dehydrogenase, NAD binding domain D3C60_08455 SM01130 D3C60_08455 D3C60_08460 SM00849 Metallo-beta-lactamase superfamily D3C60_08475 SM00382 ATPases associated with a variety of cellular activities D3C60_08475 SM00843 D3C60_08475 D3C60_08480 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_08480 SM00866 D3C60_08480 D3C60_08490 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_08525 SM00530 Helix-turn-helix XRE-family like proteins D3C60_08535 SM00852 Probable molybdopterin binding domain D3C60_08540 SM00382 ATPases associated with a variety of cellular activities D3C60_08550 SM00322 K homology RNA-binding domain D3C60_08550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D3C60_08565 SM00829 Enoylreductase D3C60_08575 SM00729 Elongator protein 3, MiaB family, Radical SAM D3C60_08590 SM00533 DNA-binding domain of DNA mismatch repair MUTS family D3C60_08590 SM00534 ATPase domain of DNA mismatch repair MUTS family D3C60_08595 SM00853 MutL C terminal dimerisation domain D3C60_08595 SM01340 D3C60_08595 D3C60_08630 SM00849 Metallo-beta-lactamase superfamily D3C60_08635 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. D3C60_08640 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. D3C60_08645 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. D3C60_08670 SM00822 D3C60_08670 D3C60_08670 SM00823 Phosphopantetheine attachment site D3C60_08670 SM00825 Beta-ketoacyl synthase D3C60_08670 SM00826 D3C60_08670 D3C60_08670 SM01294 D3C60_08670 D3C60_08675 SM00822 D3C60_08675 D3C60_08675 SM00823 Phosphopantetheine attachment site D3C60_08675 SM00825 Beta-ketoacyl synthase D3C60_08675 SM00826 D3C60_08675 D3C60_08675 SM01294 D3C60_08675 D3C60_08680 SM00822 D3C60_08680 D3C60_08680 SM00823 Phosphopantetheine attachment site D3C60_08680 SM00825 Beta-ketoacyl synthase D3C60_08680 SM00826 D3C60_08680 D3C60_08680 SM01294 D3C60_08680 D3C60_08685 SM00822 D3C60_08685 D3C60_08685 SM00823 Phosphopantetheine attachment site D3C60_08685 SM00825 Beta-ketoacyl synthase D3C60_08685 SM00826 D3C60_08685 D3C60_08685 SM01294 D3C60_08685 D3C60_08690 SM00823 Phosphopantetheine attachment site D3C60_08690 SM00825 Beta-ketoacyl synthase D3C60_08690 SM01294 D3C60_08690 D3C60_08795 SM00646 D3C60_08795 D3C60_08805 SM00382 ATPases associated with a variety of cellular activities D3C60_08820 SM00422 helix_turn_helix, mercury resistance D3C60_08825 SM01230 D3C60_08825 D3C60_08885 SM00829 Enoylreductase D3C60_08960 SM00710 Parallel beta-helix repeats D3C60_09000 SM00257 Lysin motif D3C60_09005 SM00857 Resolvase, N terminal domain D3C60_09015 SM00861 Transketolase, pyrimidine binding domain D3C60_09040 SM00448 cheY-homologous receiver domain D3C60_09110 SM01207 D3C60_09110 D3C60_09115 SM00881 CoA binding domain D3C60_09120 SM00387 Histidine kinase-like ATPases D3C60_09120 SM00433 TopoisomeraseII D3C60_09125 SM00434 DNA Topoisomerase IV D3C60_09145 SM00829 Enoylreductase D3C60_09165 SM00354 helix_turn _helix lactose operon repressor D3C60_09205 SM01067 Cellulose binding domain D3C60_09215 SM00387 Histidine kinase-like ATPases D3C60_09215 SM00388 His Kinase A (phosphoacceptor) domain D3C60_09220 SM00448 cheY-homologous receiver domain D3C60_09220 SM00862 Transcriptional regulatory protein, C terminal D3C60_09230 SM00606 Cellulose Binding Domain Type IV D3C60_09235 SM00823 Phosphopantetheine attachment site D3C60_09235 SM00824 Thioesterase D3C60_09240 SM00823 Phosphopantetheine attachment site D3C60_09245 SM00823 Phosphopantetheine attachment site D3C60_09245 SM00825 Beta-ketoacyl synthase D3C60_09250 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. D3C60_09255 SM00822 D3C60_09255 D3C60_09260 SM00882 Coenzyme A transferase D3C60_09265 SM00882 Coenzyme A transferase D3C60_09280 SM00729 Elongator protein 3, MiaB family, Radical SAM D3C60_09280 SM00876 Biotin and Thiamin Synthesis associated domain D3C60_09340 SM00878 Biotin carboxylase C-terminal domain D3C60_09370 SM00823 Phosphopantetheine attachment site D3C60_09375 SM00823 Phosphopantetheine attachment site D3C60_09380 SM00823 Phosphopantetheine attachment site D3C60_09380 SM01294 D3C60_09380 D3C60_09385 SM00823 Phosphopantetheine attachment site D3C60_09440 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor D3C60_09445 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain D3C60_09460 SM00829 Enoylreductase D3C60_09485 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase D3C60_09500 SM00822 D3C60_09500 D3C60_09530 SM00926 Molybdopterin oxidoreductase Fe4S4 domain D3C60_09545 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_09555 SM00860 SMI1 / KNR4 family D3C60_09645 SM00710 Parallel beta-helix repeats D3C60_09785 SM00530 Helix-turn-helix XRE-family like proteins D3C60_09795 SM00342 helix_turn_helix, arabinose operon control protein D3C60_09805 SM00849 Metallo-beta-lactamase superfamily D3C60_09815 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor D3C60_09850 SM00257 Lysin motif D3C60_09855 SM00341 Helicase and RNase D C-terminal D3C60_09855 SM00487 DEAD-like helicases superfamily D3C60_09855 SM00490 helicase superfamily c-terminal domain D3C60_09855 SM00956 D3C60_09855 D3C60_09940 SM00849 Metallo-beta-lactamase superfamily D3C60_09950 SM00861 Transketolase, pyrimidine binding domain D3C60_09955 SM00327 von Willebrand factor (vWF) type A domain D3C60_09960 SM00382 ATPases associated with a variety of cellular activities D3C60_09970 SM00257 Lysin motif D3C60_10075 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_10075 SM00866 D3C60_10075 D3C60_10080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D3C60_10080 SM00245 tail specific protease D3C60_10115 SM00014 Acid phosphatase homologues D3C60_10160 SM00882 Coenzyme A transferase D3C60_10165 SM00882 Coenzyme A transferase D3C60_10265 SM00860 SMI1 / KNR4 family D3C60_10275 SM00860 SMI1 / KNR4 family D3C60_10280 SM00318 Staphylococcal nuclease homologues D3C60_10280 SM00894 Excalibur calcium-binding domain D3C60_10285 SM00857 Resolvase, N terminal domain D3C60_10305 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_10335 SM00382 ATPases associated with a variety of cellular activities D3C60_10380 SM00567 E-Z type HEAT repeats D3C60_10380 SM00932 Scaffold protein Nfu/NifU N terminal D3C60_10385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D3C60_10405 SM00357 Cold shock protein domain D3C60_10445 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs D3C60_10445 SM00475 5'-3' exonuclease D3C60_10525 SM00491 D3C60_10525 D3C60_10540 SM00981 D3C60_10540 D3C60_10570 SM00487 DEAD-like helicases superfamily D3C60_10570 SM00490 helicase superfamily c-terminal domain D3C60_10620 SM00060 Fibronectin type 3 domain D3C60_10630 SM00478 endonuclease III D3C60_10630 SM00525 D3C60_10630 D3C60_10660 SM00479 D3C60_10660 D3C60_10660 SM00487 DEAD-like helicases superfamily D3C60_10660 SM00491 D3C60_10660 D3C60_10700 SM00851 MGS-like domain D3C60_10720 SM00835 Cupin D3C60_10755 SM00914 D3C60_10755 D3C60_10760 SM00028 Tetratricopeptide repeats D3C60_10825 SM00138 Methyltransferase, chemotaxis proteins D3C60_10830 SM00562 D3C60_10830 D3C60_10860 SM00411 bacterial (prokaryotic) histone like domain D3C60_10905 SM00316 Ribosomal protein S1-like RNA-binding domain D3C60_10940 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3C60_10960 SM00257 Lysin motif D3C60_10970 SM00487 DEAD-like helicases superfamily D3C60_10970 SM00490 helicase superfamily c-terminal domain D3C60_11005 SM00091 PAS domain D3C60_11005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_11005 SM00387 Histidine kinase-like ATPases D3C60_11005 SM00388 His Kinase A (phosphoacceptor) domain D3C60_11010 SM00448 cheY-homologous receiver domain D3C60_11010 SM00862 Transcriptional regulatory protein, C terminal D3C60_11030 SM00363 S4 RNA-binding domain D3C60_11175 SM00387 Histidine kinase-like ATPases D3C60_11185 SM00936 Penicillin-binding protein 5, C-terminal domain D3C60_11230 SM00919 Malic enzyme, NAD binding domain D3C60_11230 SM01274 D3C60_11230 D3C60_11245 SM00870 D3C60_11245 D3C60_11250 SM00530 Helix-turn-helix XRE-family like proteins D3C60_11355 SM00849 Metallo-beta-lactamase superfamily D3C60_11380 SM00823 Phosphopantetheine attachment site D3C60_11380 SM00825 Beta-ketoacyl synthase D3C60_11380 SM00829 Enoylreductase D3C60_11380 SM01294 D3C60_11380 D3C60_11385 SM00822 D3C60_11385 D3C60_11385 SM00823 Phosphopantetheine attachment site D3C60_11385 SM00825 Beta-ketoacyl synthase D3C60_11385 SM00826 D3C60_11385 D3C60_11390 SM00822 D3C60_11390 D3C60_11390 SM00823 Phosphopantetheine attachment site D3C60_11390 SM00825 Beta-ketoacyl synthase D3C60_11390 SM01294 D3C60_11390 D3C60_11395 SM00822 D3C60_11395 D3C60_11395 SM00823 Phosphopantetheine attachment site D3C60_11395 SM00825 Beta-ketoacyl synthase D3C60_11395 SM00826 D3C60_11395 D3C60_11395 SM01294 D3C60_11395 D3C60_11400 SM00822 D3C60_11400 D3C60_11400 SM00823 Phosphopantetheine attachment site D3C60_11400 SM00825 Beta-ketoacyl synthase D3C60_11400 SM00826 D3C60_11400 D3C60_11400 SM01294 D3C60_11400 D3C60_11405 SM00822 D3C60_11405 D3C60_11405 SM00823 Phosphopantetheine attachment site D3C60_11405 SM00825 Beta-ketoacyl synthase D3C60_11405 SM01294 D3C60_11405 D3C60_11410 SM00822 D3C60_11410 D3C60_11410 SM00823 Phosphopantetheine attachment site D3C60_11410 SM00825 Beta-ketoacyl synthase D3C60_11410 SM00826 D3C60_11410 D3C60_11410 SM01294 D3C60_11410 D3C60_11435 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. D3C60_11445 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. D3C60_11480 SM00849 Metallo-beta-lactamase superfamily D3C60_11490 SM01350 D3C60_11490 D3C60_11535 SM00382 ATPases associated with a variety of cellular activities D3C60_11545 SM00062 Bacterial periplasmic substrate-binding proteins D3C60_11545 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. D3C60_11555 SM00046 Diacylglycerol kinase catalytic domain (presumed) D3C60_11565 SM00861 Transketolase, pyrimidine binding domain D3C60_11585 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3C60_11595 SM00091 PAS domain D3C60_11595 SM00382 ATPases associated with a variety of cellular activities D3C60_11640 SM00646 D3C60_11640 D3C60_11655 SM00530 Helix-turn-helix XRE-family like proteins D3C60_11675 SM01005 Alanine racemase, C-terminal domain D3C60_11685 SM00448 cheY-homologous receiver domain D3C60_11690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D3C60_11705 SM00363 S4 RNA-binding domain D3C60_11710 SM00861 Transketolase, pyrimidine binding domain D3C60_11745 SM00878 Biotin carboxylase C-terminal domain D3C60_11790 SM00382 ATPases associated with a variety of cellular activities D3C60_11800 SM00841 Elongation factor P, C-terminal D3C60_11800 SM01185 D3C60_11800 D3C60_11830 SM00529 Helix-turn-helix diphteria tox regulatory element D3C60_11840 SM00450 Rhodanese Homology Domain D3C60_11860 SM00487 DEAD-like helicases superfamily D3C60_11860 SM00490 helicase superfamily c-terminal domain D3C60_11875 SM00530 Helix-turn-helix XRE-family like proteins D3C60_11935 SM00382 ATPases associated with a variety of cellular activities D3C60_11945 SM01091 Transporter associated domain D3C60_11970 SM00849 Metallo-beta-lactamase superfamily D3C60_11990 SM00631 D3C60_11990 D3C60_12035 SM00382 ATPases associated with a variety of cellular activities D3C60_12040 SM00382 ATPases associated with a variety of cellular activities D3C60_12085 SM00257 Lysin motif D3C60_12120 SM00518 AP endonuclease family 2 D3C60_12125 SM00487 DEAD-like helicases superfamily D3C60_12125 SM00490 helicase superfamily c-terminal domain D3C60_12160 SM00400 zinc finger D3C60_12160 SM00493 D3C60_12160 D3C60_12175 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_12220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D3C60_12275 SM00729 Elongator protein 3, MiaB family, Radical SAM D3C60_12290 SM00271 DnaJ molecular chaperone homology domain D3C60_12310 SM00729 Elongator protein 3, MiaB family, Radical SAM D3C60_12315 SM00838 Elongation factor G C-terminus D3C60_12350 SM00849 Metallo-beta-lactamase superfamily D3C60_12360 SM00278 Helix-hairpin-helix DNA-binding motif class 1 D3C60_12380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D3C60_12390 SM01103 D3C60_12390 D3C60_12460 SM00342 helix_turn_helix, arabinose operon control protein D3C60_12460 SM00871 Bacterial transcription activator, effector binding domain D3C60_12530 SM00849 Metallo-beta-lactamase superfamily D3C60_12585 SM00926 Molybdopterin oxidoreductase Fe4S4 domain D3C60_12585 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3C60_12675 SM00732 Likely ribonuclease with RNase H fold. D3C60_12685 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain D3C60_12695 SM00382 ATPases associated with a variety of cellular activities D3C60_12700 SM00062 Bacterial periplasmic substrate-binding proteins D3C60_12700 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. D3C60_12730 SM00382 ATPases associated with a variety of cellular activities D3C60_12735 SM00028 Tetratricopeptide repeats D3C60_12755 SM00382 ATPases associated with a variety of cellular activities D3C60_12780 SM00287 Bacterial SH3 domain homologues D3C60_12780 SM00646 D3C60_12780 D3C60_12790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D3C60_12790 SM00954 Region found in RelA / SpoT proteins D3C60_12840 SM01323 D3C60_12840 D3C60_12860 SM00382 ATPases associated with a variety of cellular activities D3C60_12865 SM00278 Helix-hairpin-helix DNA-binding motif class 1 D3C60_12885 SM00257 Lysin motif D3C60_12930 SM01317 D3C60_12930 D3C60_12995 SM00257 Lysin motif D3C60_12995 SM00644 D3C60_12995 D3C60_13020 SM00710 Parallel beta-helix repeats D3C60_13025 SM00047 Lysozyme subfamily 2 D3C60_13130 SM00487 DEAD-like helicases superfamily D3C60_13135 SM00990 D3C60_13135 D3C60_13150 SM00482 DNA polymerase A domain D3C60_13190 SM00530 Helix-turn-helix XRE-family like proteins D3C60_13195 SM00530 Helix-turn-helix XRE-family like proteins D3C60_13205 SM00857 Resolvase, N terminal domain D3C60_13250 SM00257 Lysin motif D3C60_13260 SM01004 Delta-aminolevulinic acid dehydratase D3C60_13295 SM00382 ATPases associated with a variety of cellular activities D3C60_13295 SM00464 Found in ATP-dependent protease La (LON) D3C60_13300 SM00382 ATPases associated with a variety of cellular activities D3C60_13305 SM00382 ATPases associated with a variety of cellular activities D3C60_13305 SM00994 ClpX C4-type zinc finger D3C60_13305 SM01086 C-terminal, D2-small domain, of ClpB protein D3C60_13330 SM01329 D3C60_13330 D3C60_13335 SM00917 LeuA allosteric (dimerisation) domain D3C60_13390 SM00909 Sporulation and spore germination D3C60_13400 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_13405 SM00421 helix_turn_helix, Lux Regulon D3C60_13445 SM00465 GIY-YIG type nucleases (URI domain) D3C60_13455 SM00813 Alpha-L-arabinofuranosidase C-terminus D3C60_13460 SM00893 Electron transfer flavoprotein domain D3C60_13465 SM00893 Electron transfer flavoprotein domain D3C60_13495 SM00463 Small MutS-related domain D3C60_13495 SM00533 DNA-binding domain of DNA mismatch repair MUTS family D3C60_13495 SM00534 ATPase domain of DNA mismatch repair MUTS family D3C60_13500 SM00278 Helix-hairpin-helix DNA-binding motif class 1 D3C60_13500 SM00481 DNA polymerase alpha chain like domain D3C60_13500 SM00483 DNA polymerase X family D3C60_13520 SM00873 B3/4 domain D3C60_13520 SM00874 tRNA synthetase B5 domain D3C60_13520 SM00896 Ferredoxin-fold anticodon binding domain D3C60_13530 SM00967 RNA 2'-O ribose methyltransferase substrate binding D3C60_13560 SM00813 Alpha-L-arabinofuranosidase C-terminus D3C60_13590 SM01007 Class II Aldolase and Adducin N-terminal domain D3C60_13650 SM00448 cheY-homologous receiver domain D3C60_13650 SM00850 LytTr DNA-binding domain D3C60_13655 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. D3C60_13655 SM00387 Histidine kinase-like ATPases D3C60_13670 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain D3C60_13685 SM00382 ATPases associated with a variety of cellular activities D3C60_13705 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3C60_13735 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain D3C60_13735 SM01232 D3C60_13735 D3C60_13740 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs D3C60_13740 SM00474 3'-5' exonuclease D3C60_13740 SM00475 5'-3' exonuclease D3C60_13740 SM00482 DNA polymerase A domain D3C60_13745 SM00091 PAS domain D3C60_13745 SM00387 Histidine kinase-like ATPases D3C60_13745 SM00388 His Kinase A (phosphoacceptor) domain D3C60_13750 SM00448 cheY-homologous receiver domain D3C60_13750 SM00862 Transcriptional regulatory protein, C terminal D3C60_13760 SM01329 D3C60_13760 D3C60_13815 SM00919 Malic enzyme, NAD binding domain D3C60_13815 SM01274 D3C60_13815 D3C60_13820 SM00481 DNA polymerase alpha chain like domain D3C60_13850 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_13855 SM00849 Metallo-beta-lactamase superfamily D3C60_13875 SM00852 Probable molybdopterin binding domain D3C60_13935 SM00981 D3C60_13935 D3C60_13970 SM00267 diguanylate cyclase D3C60_13980 SM00363 S4 RNA-binding domain D3C60_13980 SM01390 D3C60_13980 D3C60_13990 SM00860 SMI1 / KNR4 family D3C60_14080 SM00363 S4 RNA-binding domain D3C60_14100 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_14125 SM00354 helix_turn _helix lactose operon repressor D3C60_14130 SM00830 Chorismate mutase type II D3C60_14155 SM00382 ATPases associated with a variety of cellular activities D3C60_14155 SM00843 D3C60_14155 D3C60_14190 SM00919 Malic enzyme, NAD binding domain D3C60_14190 SM01274 D3C60_14190 D3C60_14195 SM00849 Metallo-beta-lactamase superfamily D3C60_14215 SM00046 Diacylglycerol kinase catalytic domain (presumed) D3C60_14250 SM00382 ATPases associated with a variety of cellular activities D3C60_14255 SM00420 helix_turn_helix, Deoxyribose operon repressor D3C60_14260 SM00363 S4 RNA-binding domain D3C60_14285 SM00354 helix_turn _helix lactose operon repressor D3C60_14315 SM00450 Rhodanese Homology Domain D3C60_14330 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) D3C60_14330 SM00091 PAS domain D3C60_14350 SM00382 ATPases associated with a variety of cellular activities D3C60_14355 SM00387 Histidine kinase-like ATPases D3C60_14360 SM00448 cheY-homologous receiver domain D3C60_14360 SM00862 Transcriptional regulatory protein, C terminal D3C60_14370 SM00382 ATPases associated with a variety of cellular activities D3C60_14390 SM00382 ATPases associated with a variety of cellular activities D3C60_14395 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_14410 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor D3C60_14415 SM00825 Beta-ketoacyl synthase D3C60_14415 SM00849 Metallo-beta-lactamase superfamily D3C60_14440 SM00729 Elongator protein 3, MiaB family, Radical SAM D3C60_14510 SM00382 ATPases associated with a variety of cellular activities D3C60_14550 SM01234 D3C60_14550 D3C60_14555 SM00947 Carbonic anhydrase D3C60_14585 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain D3C60_14750 SM00244 prohibitin homologues D3C60_14795 SM00047 Lysozyme subfamily 2 D3C60_14805 SM00835 Cupin D3C60_14840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D3C60_14840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_14840 SM00319 Homologues of the ligand binding domain of Tar D3C60_14845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D3C60_14845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_14845 SM00319 Homologues of the ligand binding domain of Tar D3C60_14850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D3C60_14850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_14850 SM00319 Homologues of the ligand binding domain of Tar D3C60_14855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D3C60_14855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_14855 SM00319 Homologues of the ligand binding domain of Tar D3C60_14880 SM00642 Alpha-amylase domain D3C60_14885 SM01091 Transporter associated domain D3C60_14955 SM00316 Ribosomal protein S1-like RNA-binding domain D3C60_14965 SM00344 helix_turn_helix ASNC type D3C60_14985 SM00387 Histidine kinase-like ATPases D3C60_14985 SM00388 His Kinase A (phosphoacceptor) domain D3C60_14990 SM01298 D3C60_14990 D3C60_14995 SM00479 D3C60_14995 D3C60_15020 SM00091 PAS domain D3C60_15020 SM00387 Histidine kinase-like ATPases D3C60_15025 SM00448 cheY-homologous receiver domain D3C60_15035 SM00382 ATPases associated with a variety of cellular activities D3C60_15095 SM00421 helix_turn_helix, Lux Regulon D3C60_15095 SM00448 cheY-homologous receiver domain D3C60_15100 SM00387 Histidine kinase-like ATPases D3C60_15130 SM00052 Putative diguanylate phosphodiesterase D3C60_15170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D3C60_15215 SM01002 Alanine dehydrogenase/PNT, C-terminal domain D3C60_15215 SM01003 Alanine dehydrogenase/PNT, N-terminal domain D3C60_15225 SM00923 MbtH-like protein D3C60_15230 SM00823 Phosphopantetheine attachment site D3C60_15230 SM00824 Thioesterase D3C60_15250 SM00822 D3C60_15250 D3C60_15315 SM01240 D3C60_15315 D3C60_15330 SM00382 ATPases associated with a variety of cellular activities D3C60_15355 SM00822 D3C60_15355 D3C60_15445 SM00729 Elongator protein 3, MiaB family, Radical SAM D3C60_15530 SM00382 ATPases associated with a variety of cellular activities D3C60_15535 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_15535 SM00866 D3C60_15535 D3C60_15565 SM00422 helix_turn_helix, mercury resistance D3C60_15575 SM00752 Horizontally Transferred TransMembrane Domain D3C60_15595 SM00465 GIY-YIG type nucleases (URI domain) D3C60_15645 SM00382 ATPases associated with a variety of cellular activities D3C60_15670 SM00382 ATPases associated with a variety of cellular activities D3C60_15670 SM00930 D3C60_15670 D3C60_15685 SM00493 D3C60_15685 D3C60_15740 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_15770 SM00382 ATPases associated with a variety of cellular activities D3C60_15785 SM00822 D3C60_15785 D3C60_15795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D3C60_15800 SM00448 cheY-homologous receiver domain D3C60_15800 SM00862 Transcriptional regulatory protein, C terminal D3C60_15805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_15805 SM00387 Histidine kinase-like ATPases D3C60_15805 SM00388 His Kinase A (phosphoacceptor) domain D3C60_15845 SM00421 helix_turn_helix, Lux Regulon D3C60_15845 SM00448 cheY-homologous receiver domain D3C60_15850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_15850 SM00387 Histidine kinase-like ATPases D3C60_15885 SM00382 ATPases associated with a variety of cellular activities D3C60_15910 SM00387 Histidine kinase-like ATPases D3C60_15910 SM00388 His Kinase A (phosphoacceptor) domain D3C60_15915 SM00448 cheY-homologous receiver domain D3C60_15915 SM00862 Transcriptional regulatory protein, C terminal D3C60_15935 SM00835 Cupin D3C60_15945 SM00382 ATPases associated with a variety of cellular activities D3C60_16005 SM00421 helix_turn_helix, Lux Regulon D3C60_16005 SM00448 cheY-homologous receiver domain D3C60_16015 SM00382 ATPases associated with a variety of cellular activities D3C60_16135 SM00382 ATPases associated with a variety of cellular activities D3C60_16150 SM00062 Bacterial periplasmic substrate-binding proteins D3C60_16155 SM00062 Bacterial periplasmic substrate-binding proteins D3C60_16205 SM00316 Ribosomal protein S1-like RNA-binding domain D3C60_16205 SM00357 Cold shock protein domain D3C60_16205 SM00955 D3C60_16205 D3C60_16220 SM00530 Helix-turn-helix XRE-family like proteins D3C60_16225 SM00530 Helix-turn-helix XRE-family like proteins D3C60_16230 SM00530 Helix-turn-helix XRE-family like proteins D3C60_16240 SM00387 Histidine kinase-like ATPases D3C60_16240 SM00388 His Kinase A (phosphoacceptor) domain D3C60_16245 SM00448 cheY-homologous receiver domain D3C60_16245 SM00862 Transcriptional regulatory protein, C terminal D3C60_16260 SM00382 ATPases associated with a variety of cellular activities D3C60_16280 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_16280 SM00382 ATPases associated with a variety of cellular activities D3C60_16305 SM00116 Domain in cystathionine beta-synthase and other proteins. D3C60_16305 SM00382 ATPases associated with a variety of cellular activities D3C60_16380 SM00984 UDP binding domain D3C60_16390 SM01192 D3C60_16390 D3C60_16390 SM01193 D3C60_16390 D3C60_16415 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3C60_16430 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_16500 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_16500 SM00895 D3C60_16500 D3C60_16595 SM00530 Helix-turn-helix XRE-family like proteins D3C60_16665 SM00640 Glycosyl hydrolases family 32 D3C60_16675 SM00354 helix_turn _helix lactose operon repressor D3C60_16715 SM00947 Carbonic anhydrase D3C60_16775 SM00028 Tetratricopeptide repeats D3C60_16780 SM00387 Histidine kinase-like ATPases D3C60_16780 SM00388 His Kinase A (phosphoacceptor) domain D3C60_16785 SM00448 cheY-homologous receiver domain D3C60_16785 SM00862 Transcriptional regulatory protein, C terminal D3C60_16790 SM00382 ATPases associated with a variety of cellular activities D3C60_16870 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_16870 SM00866 D3C60_16870 D3C60_16910 SM00382 ATPases associated with a variety of cellular activities D3C60_16915 SM00487 DEAD-like helicases superfamily D3C60_16915 SM00490 helicase superfamily c-terminal domain D3C60_16950 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D3C60_16960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D3C60_16960 SM00245 tail specific protease D3C60_16965 SM00710 Parallel beta-helix repeats D3C60_16975 SM00382 ATPases associated with a variety of cellular activities D3C60_16995 SM00957 SecA DEAD-like domain D3C60_16995 SM00958 SecA preprotein cross-linking domain D3C60_17080 SM00487 DEAD-like helicases superfamily D3C60_17080 SM00490 helicase superfamily c-terminal domain D3C60_17090 SM00421 helix_turn_helix, Lux Regulon D3C60_17090 SM00448 cheY-homologous receiver domain D3C60_17095 SM00387 Histidine kinase-like ATPases D3C60_17135 SM00984 UDP binding domain D3C60_17155 SM00646 D3C60_17155 D3C60_17190 SM00382 ATPases associated with a variety of cellular activities D3C60_17225 SM00047 Lysozyme subfamily 2 D3C60_17225 SM00287 Bacterial SH3 domain homologues D3C60_17285 SM00854 Bacterial capsule synthesis protein PGA_cap D3C60_17320 SM00354 helix_turn _helix lactose operon repressor D3C60_17335 SM00382 ATPases associated with a variety of cellular activities D3C60_17350 SM00287 Bacterial SH3 domain homologues D3C60_17400 SM00903 Flavin reductase like domain D3C60_17415 SM00344 helix_turn_helix ASNC type D3C60_17495 SM00984 UDP binding domain D3C60_17530 SM00487 DEAD-like helicases superfamily D3C60_17530 SM00490 helicase superfamily c-terminal domain D3C60_17540 SM00420 helix_turn_helix, Deoxyribose operon repressor D3C60_17540 SM01134 D3C60_17540 D3C60_17570 SM00028 Tetratricopeptide repeats D3C60_17595 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_17625 SM00938 Nitrogen regulatory protein P-II D3C60_17635 SM00014 Acid phosphatase homologues D3C60_17665 SM00155 Phospholipase D. Active site motifs. D3C60_17720 SM00028 Tetratricopeptide repeats D3C60_17725 SM00729 Elongator protein 3, MiaB family, Radical SAM D3C60_17735 SM00327 von Willebrand factor (vWF) type A domain D3C60_17740 SM00327 von Willebrand factor (vWF) type A domain D3C60_17780 SM00382 ATPases associated with a variety of cellular activities D3C60_17840 SM00226 Low molecular weight phosphatase family D3C60_17880 SM00937 D3C60_17880 D3C60_17900 SM00919 Malic enzyme, NAD binding domain D3C60_17900 SM01274 D3C60_17900 D3C60_17915 SM00357 Cold shock protein domain D3C60_17915 SM00382 ATPases associated with a variety of cellular activities D3C60_17915 SM00959 Rho termination factor, N-terminal domain D3C60_17945 SM00448 cheY-homologous receiver domain D3C60_17970 SM00155 Phospholipase D. Active site motifs. D3C60_17985 SM00382 ATPases associated with a variety of cellular activities D3C60_17990 SM00155 Phospholipase D. Active site motifs. D3C60_18015 SM00926 Molybdopterin oxidoreductase Fe4S4 domain D3C60_18030 SM00100 Cyclic nucleotide-monophosphate binding domain D3C60_18030 SM00419 helix_turn_helix, cAMP Regulatory protein D3C60_18040 SM00836 DALR anticodon binding domain D3C60_18040 SM01016 Arginyl tRNA synthetase N terminal dom D3C60_18070 SM00028 Tetratricopeptide repeats D3C60_18080 SM00530 Helix-turn-helix XRE-family like proteins D3C60_18110 SM00421 helix_turn_helix, Lux Regulon D3C60_18150 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_18170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D3C60_18195 SM00382 ATPases associated with a variety of cellular activities D3C60_18310 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3C60_18350 SM00858 D3C60_18350 D3C60_18395 SM00986 Uracil DNA glycosylase superfamily D3C60_18395 SM00987 UreE urease accessory protein, C-terminal domain D3C60_18430 SM00640 Glycosyl hydrolases family 32 D3C60_18440 SM01061 CAT RNA binding domain D3C60_18585 SM00422 helix_turn_helix, mercury resistance D3C60_18595 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase D3C60_18620 SM00954 Region found in RelA / SpoT proteins D3C60_18715 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor D3C60_18760 SM01060 D3C60_18760 D3C60_18780 SM00382 ATPases associated with a variety of cellular activities D3C60_18785 SM00382 ATPases associated with a variety of cellular activities D3C60_18810 SM00382 ATPases associated with a variety of cellular activities D3C60_18870 SM01060 D3C60_18870 D3C60_18885 SM01061 CAT RNA binding domain D3C60_18895 SM00487 DEAD-like helicases superfamily D3C60_18895 SM00490 helicase superfamily c-terminal domain D3C60_18940 SM00656 D3C60_18940 D3C60_18970 SM00487 DEAD-like helicases superfamily D3C60_18970 SM00490 helicase superfamily c-terminal domain D3C60_19015 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain D3C60_19025 SM01133 D3C60_19025 D3C60_19080 SM00382 ATPases associated with a variety of cellular activities D3C60_19085 SM00387 Histidine kinase-like ATPases D3C60_19090 SM00448 cheY-homologous receiver domain D3C60_19090 SM00862 Transcriptional regulatory protein, C terminal D3C60_19145 SM00420 helix_turn_helix, Deoxyribose operon repressor D3C60_19145 SM01134 D3C60_19145 D3C60_19160 SM00387 Histidine kinase-like ATPases D3C60_19175 SM00421 helix_turn_helix, Lux Regulon D3C60_19175 SM00448 cheY-homologous receiver domain D3C60_19205 SM00564 beta-propeller repeat D3C60_19215 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor D3C60_19265 SM01092 CO dehydrogenase flavoprotein C-terminal domain D3C60_19270 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3C60_19355 SM00028 Tetratricopeptide repeats D3C60_19380 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor D3C60_19385 SM00382 ATPases associated with a variety of cellular activities D3C60_19390 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. D3C60_19395 SM00382 ATPases associated with a variety of cellular activities D3C60_19415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_19415 SM00387 Histidine kinase-like ATPases D3C60_19415 SM00388 His Kinase A (phosphoacceptor) domain D3C60_19425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D3C60_19430 SM00849 Metallo-beta-lactamase superfamily D3C60_19445 SM00091 PAS domain D3C60_19445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D3C60_19445 SM00387 Histidine kinase-like ATPases D3C60_19445 SM00388 His Kinase A (phosphoacceptor) domain D3C60_19450 SM00448 cheY-homologous receiver domain D3C60_19450 SM00862 Transcriptional regulatory protein, C terminal D3C60_19480 SM00788 Adenylosuccinate synthetase D3C60_19490 SM00382 ATPases associated with a variety of cellular activities D3C60_19555 SM00267 diguanylate cyclase D3C60_19580 SM01131 D3C60_19580 D3C60_19600 SM00640 Glycosyl hydrolases family 32 D3C60_19605 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_19605 SM00895 D3C60_19605 D3C60_19640 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_19650 SM00347 helix_turn_helix multiple antibiotic resistance protein D3C60_19680 SM00345 helix_turn_helix gluconate operon transcriptional repressor D3C60_19700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D3C60_19735 SM00354 helix_turn _helix lactose operon repressor D3C60_19750 SM00342 helix_turn_helix, arabinose operon control protein D3C60_19775 SM00926 Molybdopterin oxidoreductase Fe4S4 domain D3C60_19800 SM00470 ParB-like nuclease domain D3C60_19810 SM00470 ParB-like nuclease domain D3C60_19820 SM01228 D3C60_19820 D3C60_19830 SM00393 Putative single-stranded nucleic acids-binding domain D3C60_19830 SM01245 D3C60_19830