locus-tag class description BBTM_00008 PF17863 AAA lid domain BBTM_00008 PF07726 ATPase family associated with various cellular activities (AAA) BBTM_00009 PF03167 Uracil DNA glycosylase superfamily BBTM_00011 PF00313 'Cold-shock' DNA-binding domain BBTM_00013 PF00118 TCP-1/cpn60 chaperonin family BBTM_00018 PF00486 Transcriptional regulatory protein, C terminal BBTM_00018 PF00072 Response regulator receiver domain BBTM_00020 PF00672 HAMP domain BBTM_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_00020 PF00512 His Kinase A (phospho-acceptor) domain BBTM_00021 PF00313 'Cold-shock' DNA-binding domain BBTM_00023 PF00582 Universal stress protein family BBTM_00027 PF17871 AAA lid domain BBTM_00027 PF07724 AAA domain (Cdc48 subfamily) BBTM_00027 PF00004 ATPase family associated with various cellular activities (AAA) BBTM_00027 PF10431 C-terminal, D2-small domain, of ClpB protein BBTM_00027 PF02861 Clp amino terminal domain, pathogenicity island component BBTM_00033 PF03993 Domain of Unknown Function (DUF349) BBTM_00036 PF13393 Histidyl-tRNA synthetase BBTM_00036 PF03129 Anticodon binding domain BBTM_00038 PF00152 tRNA synthetases class II (D, K and N) BBTM_00038 PF01336 OB-fold nucleic acid binding domain BBTM_00038 PF02938 GAD domain BBTM_00043 PF00005 ABC transporter BBTM_00044 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBTM_00045 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBTM_00047 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_00048 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_00049 PF03976 Polyphosphate kinase 2 (PPK2) BBTM_00051 PF08148 DSHCT (NUC185) domain BBTM_00051 PF00270 DEAD/DEAH box helicase BBTM_00051 PF00271 Helicase conserved C-terminal domain BBTM_00053 PF16193 AAA C-terminal domain BBTM_00053 PF00004 ATPase family associated with various cellular activities (AAA) BBTM_00053 PF12002 MgsA AAA+ ATPase C terminal BBTM_00054 PF07690 Major Facilitator Superfamily BBTM_00056 PF02361 Cobalt transport protein BBTM_00056 PF00005 ABC transporter BBTM_00060 PF00480 ROK family BBTM_00063 PF00005 ABC transporter BBTM_00071 PF12826 Helix-hairpin-helix motif BBTM_00071 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BBTM_00071 PF03120 NAD-dependent DNA ligase OB-fold domain BBTM_00071 PF01653 NAD-dependent DNA ligase adenylation domain BBTM_00071 PF00533 BRCA1 C Terminus (BRCT) domain BBTM_00072 PF10609 NUBPL iron-transfer P-loop NTPase BBTM_00072 PF01883 Iron-sulfur cluster assembly protein BBTM_00082 PF03951 Glutamine synthetase, beta-Grasp domain BBTM_00082 PF00120 Glutamine synthetase, catalytic domain BBTM_00084 PF13829 Domain of unknown function (DUF4191) BBTM_00086 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBTM_00086 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBTM_00094 PF00005 ABC transporter BBTM_00096 PF00933 Glycosyl hydrolase family 3 N terminal domain BBTM_00100 PF03699 Uncharacterised protein family (UPF0182) BBTM_00101 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BBTM_00102 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BBTM_00106 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BBTM_00107 PF16363 GDP-mannose 4,6 dehydratase BBTM_00109 PF01061 ABC-2 type transporter BBTM_00111 PF00005 ABC transporter BBTM_00111 PF08239 Bacterial SH3 domain BBTM_00113 PF01195 Peptidyl-tRNA hydrolase BBTM_00116 PF17757 UvrB interaction domain BBTM_00116 PF02559 CarD-like/TRCF domain BBTM_00116 PF03461 TRCF domain BBTM_00116 PF00271 Helicase conserved C-terminal domain BBTM_00116 PF00270 DEAD/DEAH box helicase BBTM_00118 PF04715 Anthranilate synthase component I, N terminal region BBTM_00118 PF00425 chorismate binding enzyme BBTM_00119 PF01063 Amino-transferase class IV BBTM_00120 PF00113 Enolase, C-terminal TIM barrel domain BBTM_00120 PF03952 Enolase, N-terminal domain BBTM_00127 PF02541 Ppx/GppA phosphatase family BBTM_00130 PF03315 Serine dehydratase beta chain BBTM_00130 PF03313 Serine dehydratase alpha chain BBTM_00132 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBTM_00133 PF01272 Transcription elongation factor, GreA/GreB, C-term BBTM_00133 PF03449 Transcription elongation factor, N-terminal BBTM_00135 PF03006 Haemolysin-III related BBTM_00137 PF12282 Signal transduction histidine kinase BBTM_00137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_00137 PF07568 Histidine kinase BBTM_00138 PF02467 Transcription factor WhiB BBTM_00139 PF12538 DNA transporter BBTM_00139 PF01580 FtsK/SpoIIIE family BBTM_00140 PF03816 Cell envelope-related transcriptional attenuator domain BBTM_00141 PF02467 Transcription factor WhiB BBTM_00150 PF00156 Phosphoribosyl transferase domain BBTM_00151 PF00717 Peptidase S24-like BBTM_00152 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_00152 PF00672 HAMP domain BBTM_00152 PF00512 His Kinase A (phospho-acceptor) domain BBTM_00153 PF00486 Transcriptional regulatory protein, C terminal BBTM_00153 PF00072 Response regulator receiver domain BBTM_00157 PF00128 Alpha amylase, catalytic domain BBTM_00157 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBTM_00157 PF02806 Alpha amylase, C-terminal all-beta domain BBTM_00158 PF02559 CarD-like/TRCF domain BBTM_00160 PF02542 YgbB family BBTM_00161 PF00950 ABC 3 transport family BBTM_00163 PF00005 ABC transporter BBTM_00167 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BBTM_00167 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BBTM_00168 PF00575 S1 RNA binding domain BBTM_00170 PF01121 Dephospho-CoA kinase BBTM_00172 PF02151 UvrB/uvrC motif BBTM_00172 PF04851 Type III restriction enzyme, res subunit BBTM_00172 PF17757 UvrB interaction domain BBTM_00172 PF00271 Helicase conserved C-terminal domain BBTM_00172 PF12344 Ultra-violet resistance protein B BBTM_00174 PF03741 Integral membrane protein TerC family BBTM_00176 PF00224 Pyruvate kinase, barrel domain BBTM_00176 PF02887 Pyruvate kinase, alpha/beta domain BBTM_00178 PF00293 NUDIX domain BBTM_00179 PF03861 ANTAR domain BBTM_00179 PF00072 Response regulator receiver domain BBTM_00181 PF00476 DNA polymerase family A BBTM_00181 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BBTM_00181 PF01367 5'-3' exonuclease, C-terminal SAM fold BBTM_00184 PF01784 NIF3 (NGG1p interacting factor 3) BBTM_00185 PF00293 NUDIX domain BBTM_00186 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBTM_00186 PF00128 Alpha amylase, catalytic domain BBTM_00188 PF00589 Phage integrase family BBTM_00188 PF02899 Phage integrase, N-terminal SAM-like domain BBTM_00190 PF03575 Peptidase family S51 BBTM_00192 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BBTM_00194 PF00871 Acetokinase family BBTM_00196 PF01515 Phosphate acetyl/butaryl transferase BBTM_00196 PF07085 DRTGG domain BBTM_00197 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BBTM_00197 PF13542 Helix-turn-helix domain of transposase family ISL3 BBTM_00197 PF01610 Transposase BBTM_00199 PF01527 Transposase BBTM_00199 PF00665 Integrase core domain BBTM_00199 PF13276 HTH-like domain BBTM_00199 PF13333 Integrase core domain BBTM_00200 PF13333 Integrase core domain BBTM_00200 PF00665 Integrase core domain BBTM_00200 PF01527 Transposase BBTM_00200 PF13276 HTH-like domain BBTM_00203 PF00958 GMP synthase C terminal domain BBTM_00203 PF00117 Glutamine amidotransferase class-I BBTM_00203 PF02540 NAD synthase BBTM_00204 PF09363 XFP C-terminal domain BBTM_00204 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase BBTM_00204 PF09364 XFP N-terminal domain BBTM_00207 PF01384 Phosphate transporter family BBTM_00209 PF00072 Response regulator receiver domain BBTM_00209 PF00196 Bacterial regulatory proteins, luxR family BBTM_00211 PF07730 Histidine kinase BBTM_00215 PF00005 ABC transporter BBTM_00219 PF00270 DEAD/DEAH box helicase BBTM_00219 PF13749 Putative ATP-dependent DNA helicase recG C-terminal BBTM_00219 PF17191 RecG wedge domain BBTM_00220 PF13936 Helix-turn-helix domain BBTM_00223 PF03389 MobA/MobL family BBTM_00224 PF01527 Transposase BBTM_00226 PF00665 Integrase core domain BBTM_00226 PF13276 HTH-like domain BBTM_00227 PF13651 Adenine-specific methyltransferase EcoRI BBTM_00231 PF00857 Isochorismatase family BBTM_00234 PF01380 SIS domain BBTM_00236 PF01380 SIS domain BBTM_00239 PF00860 Permease family BBTM_00241 PF00156 Phosphoribosyl transferase domain BBTM_00244 PF01757 Acyltransferase family BBTM_00245 PF13361 UvrD-like helicase C-terminal domain BBTM_00245 PF00580 UvrD/REP helicase N-terminal domain BBTM_00249 PF00005 ABC transporter BBTM_00249 PF02687 FtsX-like permease family BBTM_00249 PF12704 MacB-like periplasmic core domain BBTM_00251 PF00163 Ribosomal protein S4/S9 N-terminal domain BBTM_00251 PF01479 S4 domain BBTM_00254 PF01757 Acyltransferase family BBTM_00258 PF02272 DHHA1 domain BBTM_00258 PF01411 tRNA synthetases class II (A) BBTM_00258 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BBTM_00260 PF03652 Holliday junction resolvase BBTM_00264 PF01264 Chorismate synthase BBTM_00266 PF01202 Shikimate kinase BBTM_00266 PF01761 3-dehydroquinate synthase BBTM_00267 PF01220 Dehydroquinase class II BBTM_00270 PF00072 Response regulator receiver domain BBTM_00270 PF00196 Bacterial regulatory proteins, luxR family BBTM_00273 PF00117 Glutamine amidotransferase class-I BBTM_00273 PF06418 CTP synthase N-terminus BBTM_00275 PF00117 Glutamine amidotransferase class-I BBTM_00275 PF06418 CTP synthase N-terminus BBTM_00277 PF01458 Uncharacterized protein family (UPF0051) BBTM_00278 PF01458 Uncharacterized protein family (UPF0051) BBTM_00280 PF00005 ABC transporter BBTM_00282 PF00266 Aminotransferase class-V BBTM_00286 PF01883 Iron-sulfur cluster assembly protein BBTM_00288 PF00483 Nucleotidyl transferase BBTM_00289 PF00483 Nucleotidyl transferase BBTM_00290 PF00588 SpoU rRNA Methylase family BBTM_00292 PF04452 RNA methyltransferase BBTM_00293 PF01230 HIT domain BBTM_00295 PF02562 PhoH-like protein BBTM_00296 PF02130 Uncharacterized protein family UPF0054 BBTM_00299 PF00571 CBS domain BBTM_00299 PF03471 Transporter associated domain BBTM_00299 PF01595 Cyclin M transmembrane N-terminal domain BBTM_00301 PF01926 50S ribosome-binding GTPase BBTM_00301 PF07650 KH domain BBTM_00304 PF00501 AMP-binding enzyme BBTM_00305 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BBTM_00305 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BBTM_00306 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BBTM_00308 PF02233 NAD(P) transhydrogenase beta subunit BBTM_00311 PF12146 Serine aminopeptidase, S33 BBTM_00312 PF01386 Ribosomal L25p family BBTM_00312 PF14693 Ribosomal protein TL5, C-terminal domain BBTM_00314 PF01063 Amino-transferase class IV BBTM_00319 PF03458 UPF0126 domain BBTM_00320 PF01649 Ribosomal protein S20 BBTM_00322 PF06421 GTP-binding protein LepA C-terminus BBTM_00322 PF00009 Elongation factor Tu GTP binding domain BBTM_00322 PF00679 Elongation factor G C-terminus BBTM_00323 PF04055 Radical SAM superfamily BBTM_00326 PF00155 Aminotransferase class I and II BBTM_00329 PF00009 Elongation factor Tu GTP binding domain BBTM_00329 PF03764 Elongation factor G, domain IV BBTM_00329 PF14492 Elongation Factor G, domain II BBTM_00329 PF00679 Elongation factor G C-terminus BBTM_00332 PF04898 Glutamate synthase central domain BBTM_00332 PF00310 Glutamine amidotransferases class-II BBTM_00332 PF01645 Conserved region in glutamate synthase BBTM_00332 PF01493 GXGXG motif BBTM_00333 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBTM_00333 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BBTM_00337 PF13439 Glycosyltransferase Family 4 BBTM_00337 PF00534 Glycosyl transferases group 1 BBTM_00339 PF00005 ABC transporter BBTM_00341 PF00795 Carbon-nitrogen hydrolase BBTM_00344 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BBTM_00347 PF13936 Helix-turn-helix domain BBTM_00347 PF00665 Integrase core domain BBTM_00348 PF00271 Helicase conserved C-terminal domain BBTM_00348 PF00176 SNF2 family N-terminal domain BBTM_00352 PF13361 UvrD-like helicase C-terminal domain BBTM_00352 PF00570 HRDC domain BBTM_00354 PF00872 Transposase, Mutator family BBTM_00356 PF00872 Transposase, Mutator family BBTM_00357 PF00872 Transposase, Mutator family BBTM_00359 PF00872 Transposase, Mutator family BBTM_00363 PF00892 EamA-like transporter family BBTM_00365 PF12146 Serine aminopeptidase, S33 BBTM_00366 PF08704 tRNA methyltransferase complex GCD14 subunit BBTM_00369 PF01717 Cobalamin-independent synthase, Catalytic domain BBTM_00369 PF08267 Cobalamin-independent synthase, N-terminal domain BBTM_00371 PF02219 Methylenetetrahydrofolate reductase BBTM_00374 PF08335 GlnD PII-uridylyltransferase BBTM_00374 PF03710 Glutamate-ammonia ligase adenylyltransferase BBTM_00375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BBTM_00375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BBTM_00376 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BBTM_00376 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BBTM_00377 PF01979 Amidohydrolase family BBTM_00379 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BBTM_00380 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BBTM_00381 PF01180 Dihydroorotate dehydrogenase BBTM_00382 PF00156 Phosphoribosyl transferase domain BBTM_00385 PF00107 Zinc-binding dehydrogenase BBTM_00385 PF08240 Alcohol dehydrogenase GroES-like domain BBTM_00391 PF00005 ABC transporter BBTM_00391 PF17755 UvrA DNA-binding domain BBTM_00391 PF17760 UvrA interaction domain BBTM_00397 PF00106 short chain dehydrogenase BBTM_00403 PF03079 ARD/ARD' family BBTM_00409 PF00440 Bacterial regulatory proteins, tetR family BBTM_00412 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBTM_00412 PF03466 LysR substrate binding domain BBTM_00415 PF03853 YjeF-related protein N-terminus BBTM_00415 PF01256 Carbohydrate kinase BBTM_00426 PF08148 DSHCT (NUC185) domain BBTM_00426 PF00270 DEAD/DEAH box helicase BBTM_00426 PF00271 Helicase conserved C-terminal domain BBTM_00428 PF13397 RNA polymerase-binding protein BBTM_00431 PF02142 MGS-like domain BBTM_00443 PF13411 MerR HTH family regulatory protein BBTM_00445 PF00498 FHA domain BBTM_00449 PF06947 Protein of unknown function (DUF1290) BBTM_00453 PF01066 CDP-alcohol phosphatidyltransferase BBTM_00454 PF01634 ATP phosphoribosyltransferase BBTM_00454 PF08029 HisG, C-terminal domain BBTM_00455 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BBTM_00456 PF00834 Ribulose-phosphate 3 epimerase family BBTM_00459 PF01790 Prolipoprotein diacylglyceryl transferase BBTM_00460 PF00290 Tryptophan synthase alpha chain BBTM_00461 PF00291 Pyridoxal-phosphate dependent enzyme BBTM_00463 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BBTM_00463 PF01926 50S ribosome-binding GTPase BBTM_00464 PF01479 S4 domain BBTM_00464 PF00849 RNA pseudouridylate synthase BBTM_00465 PF00230 Major intrinsic protein BBTM_00467 PF02142 MGS-like domain BBTM_00467 PF01808 AICARFT/IMPCHase bienzyme BBTM_00472 PF02629 CoA binding domain BBTM_00472 PF00549 CoA-ligase BBTM_00473 PF08442 ATP-grasp domain BBTM_00473 PF00549 CoA-ligase BBTM_00475 PF00156 Phosphoribosyl transferase domain BBTM_00476 PF02699 Preprotein translocase subunit BBTM_00477 PF17864 RuvB AAA lid domain BBTM_00477 PF05496 Holliday junction DNA helicase RuvB P-loop domain BBTM_00477 PF05491 RuvB C-terminal winged helix domain BBTM_00479 PF01330 RuvA N terminal domain BBTM_00479 PF07499 RuvA, C-terminal domain BBTM_00481 PF02075 Crossover junction endodeoxyribonuclease RuvC BBTM_00483 PF01709 Transcriptional regulator BBTM_00486 PF00728 Glycosyl hydrolase family 20, catalytic domain BBTM_00486 PF02838 Glycosyl hydrolase family 20, domain 2 BBTM_00488 PF03129 Anticodon binding domain BBTM_00488 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBTM_00488 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BBTM_00491 PF00375 Sodium:dicarboxylate symporter family BBTM_00495 PF02673 Bacitracin resistance protein BacA BBTM_00499 PF01556 DnaJ C terminal domain BBTM_00499 PF00226 DnaJ domain BBTM_00499 PF00684 DnaJ central domain BBTM_00500 PF01628 HrcA protein C terminal domain BBTM_00501 PF02779 Transketolase, pyrimidine binding domain BBTM_00501 PF02780 Transketolase, C-terminal domain BBTM_00501 PF00456 Transketolase, thiamine diphosphate binding domain BBTM_00502 PF00923 Transaldolase/Fructose-6-phosphate aldolase BBTM_00504 PF06912 Protein of unknown function (DUF1275) BBTM_00506 PF05525 Branched-chain amino acid transport protein BBTM_00513 PF00056 lactate/malate dehydrogenase, NAD binding domain BBTM_00513 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BBTM_00516 PF03840 Preprotein translocase SecG subunit BBTM_00517 PF00121 Triosephosphate isomerase BBTM_00518 PF00162 Phosphoglycerate kinase BBTM_00520 PF10298 WhiA N-terminal LAGLIDADG-like domain BBTM_00520 PF02650 WhiA C-terminal HTH domain BBTM_00520 PF14527 WhiA LAGLIDADG-like domain BBTM_00521 PF03668 P-loop ATPase protein family BBTM_00522 PF01488 Shikimate / quinate 5-dehydrogenase BBTM_00522 PF08501 Shikimate dehydrogenase substrate binding domain BBTM_00522 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BBTM_00523 PF08459 UvrC Helix-hairpin-helix N-terminal BBTM_00523 PF02151 UvrB/uvrC motif BBTM_00523 PF01541 GIY-YIG catalytic domain BBTM_00525 PF00005 ABC transporter BBTM_00525 PF17755 UvrA DNA-binding domain BBTM_00525 PF17760 UvrA interaction domain BBTM_00528 PF12704 MacB-like periplasmic core domain BBTM_00528 PF02687 FtsX-like permease family BBTM_00528 PF00005 ABC transporter BBTM_00531 PF00072 Response regulator receiver domain BBTM_00531 PF00486 Transcriptional regulatory protein, C terminal BBTM_00533 PF00872 Transposase, Mutator family BBTM_00534 PF00672 HAMP domain BBTM_00534 PF00512 His Kinase A (phospho-acceptor) domain BBTM_00534 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_00535 PF02557 D-alanyl-D-alanine carboxypeptidase BBTM_00538 PF16326 ABC transporter C-terminal domain BBTM_00538 PF00005 ABC transporter BBTM_00538 PF12848 ABC transporter BBTM_00539 PF16363 GDP-mannose 4,6 dehydratase BBTM_00540 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BBTM_00540 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BBTM_00542 PF01636 Phosphotransferase enzyme family BBTM_00545 PF00480 ROK family BBTM_00546 PF00480 ROK family BBTM_00549 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain BBTM_00549 PF17386 Lacto-N-biose phosphorylase C-terminal domain BBTM_00549 PF17385 Lacto-N-biose phosphorylase central domain BBTM_00552 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_00554 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_00558 PF04715 Anthranilate synthase component I, N terminal region BBTM_00558 PF00425 chorismate binding enzyme BBTM_00559 PF01502 Phosphoribosyl-AMP cyclohydrolase BBTM_00560 PF00977 Histidine biosynthesis protein BBTM_00561 PF04055 Radical SAM superfamily BBTM_00565 PF01765 Ribosome recycling factor BBTM_00566 PF00696 Amino acid kinase family BBTM_00570 PF00889 Elongation factor TS BBTM_00571 PF00318 Ribosomal protein S2 BBTM_00572 PF01327 Polypeptide deformylase BBTM_00575 PF00501 AMP-binding enzyme BBTM_00579 PF00180 Isocitrate/isopropylmalate dehydrogenase BBTM_00581 PF00478 IMP dehydrogenase / GMP reductase domain BBTM_00585 PF00501 AMP-binding enzyme BBTM_00588 PF00814 Glycoprotease family BBTM_00590 PF00583 Acetyltransferase (GNAT) family BBTM_00591 PF00814 Glycoprotease family BBTM_00592 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BBTM_00601 PF08264 Anticodon-binding domain of tRNA BBTM_00601 PF13603 Leucyl-tRNA synthetase, Domain 2 BBTM_00601 PF09334 tRNA synthetases class I (M) BBTM_00602 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBTM_00603 PF01544 CorA-like Mg2+ transporter protein BBTM_00605 PF00300 Histidine phosphatase superfamily (branch 1) BBTM_00613 PF01261 Xylose isomerase-like TIM barrel BBTM_00614 PF04343 Protein of unknown function, DUF488 BBTM_00627 PF02586 SOS response associated peptidase (SRAP) BBTM_00642 PF02525 Flavodoxin-like fold BBTM_00653 PF16657 Maltogenic Amylase, C-terminal domain BBTM_00653 PF02903 Alpha amylase, N-terminal ig-like domain BBTM_00653 PF00128 Alpha amylase, catalytic domain BBTM_00659 PF12804 MobA-like NTP transferase domain BBTM_00659 PF00132 Bacterial transferase hexapeptide (six repeats) BBTM_00660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BBTM_00660 PF14572 Phosphoribosyl synthetase-associated domain BBTM_00662 PF01467 Cytidylyltransferase-like BBTM_00664 PF00171 Aldehyde dehydrogenase family BBTM_00666 PF14821 Threonine synthase N terminus BBTM_00666 PF00291 Pyridoxal-phosphate dependent enzyme BBTM_00670 PF00005 ABC transporter BBTM_00672 PF00392 Bacterial regulatory proteins, gntR family BBTM_00673 PF13419 Haloacid dehalogenase-like hydrolase BBTM_00675 PF02463 RecF/RecN/SMC N terminal domain BBTM_00676 PF01513 ATP-NAD kinase BBTM_00678 PF02386 Cation transport protein BBTM_00680 PF02080 TrkA-C domain BBTM_00680 PF02254 TrkA-N domain BBTM_00683 PF01479 S4 domain BBTM_00683 PF01728 FtsJ-like methyltransferase BBTM_00687 PF13344 Haloacid dehalogenase-like hydrolase BBTM_00691 PF01479 S4 domain BBTM_00691 PF00579 tRNA synthetases class I (W and Y) BBTM_00696 PF00206 Lyase BBTM_00696 PF14698 Argininosuccinate lyase C-terminal BBTM_00698 PF12008 Type I restriction and modification enzyme - subunit R C terminal BBTM_00698 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BBTM_00698 PF18766 SWI2/SNF2 ATPase BBTM_00700 PF00872 Transposase, Mutator family BBTM_00701 PF18766 SWI2/SNF2 ATPase BBTM_00701 PF12008 Type I restriction and modification enzyme - subunit R C terminal BBTM_00701 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BBTM_00705 PF02384 N-6 DNA Methylase BBTM_00705 PF12161 HsdM N-terminal domain BBTM_00708 PF00589 Phage integrase family BBTM_00708 PF02899 Phage integrase, N-terminal SAM-like domain BBTM_00710 PF00764 Arginosuccinate synthase BBTM_00712 PF02863 Arginine repressor, C-terminal domain BBTM_00712 PF01316 Arginine repressor, DNA binding domain BBTM_00715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BBTM_00715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BBTM_00716 PF00202 Aminotransferase class-III BBTM_00718 PF00696 Amino acid kinase family BBTM_00719 PF01960 ArgJ family BBTM_00721 PF02774 Semialdehyde dehydrogenase, dimerisation domain BBTM_00721 PF01118 Semialdehyde dehydrogenase, NAD binding domain BBTM_00725 PF01588 Putative tRNA binding domain BBTM_00725 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BBTM_00725 PF03483 B3/4 domain BBTM_00725 PF03147 Ferredoxin-fold anticodon binding domain BBTM_00725 PF03484 tRNA synthetase B5 domain BBTM_00727 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BBTM_00727 PF01409 tRNA synthetases class II core domain (F) BBTM_00728 PF00588 SpoU rRNA Methylase family BBTM_00728 PF08032 RNA 2'-O ribose methyltransferase substrate binding BBTM_00730 PF00005 ABC transporter BBTM_00731 PF03649 Uncharacterised protein family (UPF0014) BBTM_00735 PF00872 Transposase, Mutator family BBTM_00738 PF00860 Permease family BBTM_00742 PF03601 Conserved hypothetical protein 698 BBTM_00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBTM_00745 PF03466 LysR substrate binding domain BBTM_00750 PF00535 Glycosyl transferase family 2 BBTM_00750 PF01501 Glycosyl transferase family 8 BBTM_00757 PF01327 Polypeptide deformylase BBTM_00762 PF00872 Transposase, Mutator family BBTM_00772 PF07714 Protein tyrosine kinase BBTM_00782 PF00665 Integrase core domain BBTM_00782 PF13276 HTH-like domain BBTM_00782 PF13333 Integrase core domain BBTM_00791 PF02481 DNA recombination-mediator protein A BBTM_00791 PF17782 DprA winged helix domain BBTM_00799 PF01926 50S ribosome-binding GTPase BBTM_00799 PF06071 Protein of unknown function (DUF933) BBTM_00800 PF00155 Aminotransferase class I and II BBTM_00801 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_00802 PF09383 NIL domain BBTM_00802 PF00005 ABC transporter BBTM_00803 PF00364 Biotin-requiring enzyme BBTM_00803 PF02780 Transketolase, C-terminal domain BBTM_00803 PF02779 Transketolase, pyrimidine binding domain BBTM_00806 PF00676 Dehydrogenase E1 component BBTM_00808 PF03180 NLPA lipoprotein BBTM_00811 PF01112 Asparaginase BBTM_00813 PF14748 Pyrroline-5-carboxylate reductase dimerisation BBTM_00813 PF03807 NADP oxidoreductase coenzyme F420-dependent BBTM_00815 PF00561 alpha/beta hydrolase fold BBTM_00816 PF05231 MASE1 BBTM_00816 PF07730 Histidine kinase BBTM_00816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_00818 PF00196 Bacterial regulatory proteins, luxR family BBTM_00818 PF00072 Response regulator receiver domain BBTM_00821 PF01569 PAP2 superfamily BBTM_00822 PF02687 FtsX-like permease family BBTM_00822 PF00005 ABC transporter BBTM_00822 PF12704 MacB-like periplasmic core domain BBTM_00823 PF00005 ABC transporter BBTM_00825 PF01053 Cys/Met metabolism PLP-dependent enzyme BBTM_00830 PF00890 FAD binding domain BBTM_00830 PF02910 Fumarate reductase flavoprotein C-term BBTM_00831 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BBTM_00831 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BBTM_00833 PF02481 DNA recombination-mediator protein A BBTM_00833 PF17782 DprA winged helix domain BBTM_00835 PF13335 Magnesium chelatase, subunit ChlI C-terminal BBTM_00835 PF01078 Magnesium chelatase, subunit ChlI BBTM_00837 PF02021 Uncharacterised protein family UPF0102 BBTM_00839 PF13085 2Fe-2S iron-sulfur cluster binding domain BBTM_00841 PF03641 Possible lysine decarboxylase BBTM_00842 PF06965 Na+/H+ antiporter 1 BBTM_00846 PF00155 Aminotransferase class I and II BBTM_00847 PF10431 C-terminal, D2-small domain, of ClpB protein BBTM_00847 PF06689 ClpX C4-type zinc finger BBTM_00847 PF07724 AAA domain (Cdc48 subfamily) BBTM_00849 PF00574 Clp protease BBTM_00850 PF00574 Clp protease BBTM_00853 PF05697 Bacterial trigger factor protein (TF) BBTM_00853 PF05698 Bacterial trigger factor protein (TF) C-terminus BBTM_00853 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBTM_00858 PF04055 Radical SAM superfamily BBTM_00860 PF02901 Pyruvate formate lyase-like BBTM_00860 PF01228 Glycine radical BBTM_00862 PF02540 NAD synthase BBTM_00862 PF00795 Carbon-nitrogen hydrolase BBTM_00864 PF01546 Peptidase family M20/M25/M40 BBTM_00864 PF07687 Peptidase dimerisation domain BBTM_00868 PF00005 ABC transporter BBTM_00868 PF09383 NIL domain BBTM_00871 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BBTM_00876 PF02824 TGS domain BBTM_00876 PF13291 ACT domain BBTM_00876 PF04607 Region found in RelA / SpoT proteins BBTM_00879 PF00692 dUTPase BBTM_00885 PF03989 DNA gyrase C-terminal domain, beta-propeller BBTM_00885 PF00521 DNA gyrase/topoisomerase IV, subunit A BBTM_00890 PF00271 Helicase conserved C-terminal domain BBTM_00890 PF08494 DEAD/H associated BBTM_00890 PF00270 DEAD/DEAH box helicase BBTM_00891 PF13443 Cro/C1-type HTH DNA-binding domain BBTM_00894 PF10415 Fumarase C C-terminus BBTM_00894 PF00206 Lyase BBTM_00897 PF00204 DNA gyrase B BBTM_00897 PF00986 DNA gyrase B subunit, carboxyl terminus BBTM_00897 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_00897 PF01751 Toprim domain BBTM_00899 PF04545 Sigma-70, region 4 BBTM_00899 PF04539 Sigma-70 region 3 BBTM_00899 PF04542 Sigma-70 region 2 BBTM_00899 PF00140 Sigma-70 factor, region 1.2 BBTM_00903 PF00348 Polyprenyl synthetase BBTM_00905 PF00069 Protein kinase domain BBTM_00905 PF03793 PASTA domain BBTM_00906 PF01553 Acyltransferase BBTM_00908 PF00591 Glycosyl transferase family, a/b domain BBTM_00908 PF02885 Glycosyl transferase family, helical bundle domain BBTM_00910 PF07517 SecA DEAD-like domain BBTM_00910 PF07516 SecA Wing and Scaffold domain BBTM_00910 PF02810 SEC-C motif BBTM_00910 PF01043 SecA preprotein cross-linking domain BBTM_00912 PF01043 SecA preprotein cross-linking domain BBTM_00912 PF07517 SecA DEAD-like domain BBTM_00912 PF02810 SEC-C motif BBTM_00912 PF07516 SecA Wing and Scaffold domain BBTM_00913 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BBTM_00913 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BBTM_00917 PF02631 RecX family BBTM_00918 PF00154 recA bacterial DNA recombination protein BBTM_00923 PF00994 Probable molybdopterin binding domain BBTM_00923 PF18146 Damage-inducible protein CinA KH domain BBTM_00923 PF02464 Competence-damaged protein BBTM_00925 PF01066 CDP-alcohol phosphatidyltransferase BBTM_00928 PF17854 FtsK alpha domain BBTM_00928 PF01580 FtsK/SpoIIIE family BBTM_00928 PF09397 Ftsk gamma domain BBTM_00928 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BBTM_00935 PF00919 Uncharacterized protein family UPF0004 BBTM_00935 PF04055 Radical SAM superfamily BBTM_00937 PF04607 Region found in RelA / SpoT proteins BBTM_00943 PF01027 Inhibitor of apoptosis-promoting Bax1 BBTM_00948 PF00196 Bacterial regulatory proteins, luxR family BBTM_00948 PF00072 Response regulator receiver domain BBTM_00951 PF00625 Guanylate kinase BBTM_00953 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BBTM_00953 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BBTM_00953 PF02142 MGS-like domain BBTM_00954 PF00117 Glutamine amidotransferase class-I BBTM_00954 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BBTM_00956 PF01029 NusB family BBTM_00957 PF01132 Elongation factor P (EF-P) OB domain BBTM_00957 PF09285 Elongation factor P, C-terminal BBTM_00957 PF08207 Elongation factor P (EF-P) KOW-like domain BBTM_00962 PF00009 Elongation factor Tu GTP binding domain BBTM_00962 PF03144 Elongation factor Tu domain 2 BBTM_00962 PF03143 Elongation factor Tu C-terminal domain BBTM_00965 PF00009 Elongation factor Tu GTP binding domain BBTM_00965 PF00679 Elongation factor G C-terminus BBTM_00965 PF14492 Elongation Factor G, domain II BBTM_00965 PF03144 Elongation factor Tu domain 2 BBTM_00965 PF03764 Elongation factor G, domain IV BBTM_00966 PF00177 Ribosomal protein S7p/S5e BBTM_00967 PF00164 Ribosomal protein S12/S23 BBTM_00973 PF13229 Right handed beta helix region BBTM_00973 PF12708 Pectate lyase superfamily protein BBTM_00974 PF02222 ATP-grasp domain BBTM_00975 PF02222 ATP-grasp domain BBTM_00977 PF01259 SAICAR synthetase BBTM_00979 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BBTM_00979 PF02769 AIR synthase related protein, C-terminal domain BBTM_00979 PF00586 AIR synthase related protein, N-terminal domain BBTM_00991 PF11799 impB/mucB/samB family C-terminal domain BBTM_00991 PF11798 IMS family HHH motif BBTM_00991 PF00817 impB/mucB/samB family BBTM_00994 PF00156 Phosphoribosyl transferase domain BBTM_00994 PF13537 Glutamine amidotransferase domain BBTM_00995 PF00586 AIR synthase related protein, N-terminal domain BBTM_00995 PF02769 AIR synthase related protein, C-terminal domain BBTM_00997 PF02844 Phosphoribosylglycinamide synthetase, N domain BBTM_00997 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BBTM_00997 PF02843 Phosphoribosylglycinamide synthetase, C domain BBTM_01000 PF00884 Sulfatase BBTM_01001 PF00756 Putative esterase BBTM_01003 PF09924 Uncharacterised conserved protein (DUF2156) BBTM_01009 PF00830 Ribosomal L28 family BBTM_01010 PF00253 Ribosomal protein S14p/S29e BBTM_01011 PF01197 Ribosomal protein L31 BBTM_01012 PF00444 Ribosomal protein L36 BBTM_01013 PF01783 Ribosomal L32p protein family BBTM_01014 PF03773 Predicted permease BBTM_01018 PF01475 Ferric uptake regulator family BBTM_01021 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BBTM_01021 PF02222 ATP-grasp domain BBTM_01022 PF00731 AIR carboxylase BBTM_01023 PF02779 Transketolase, pyrimidine binding domain BBTM_01023 PF02780 Transketolase, C-terminal domain BBTM_01023 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BBTM_01025 PF01875 Memo-like protein BBTM_01027 PF17191 RecG wedge domain BBTM_01027 PF13749 Putative ATP-dependent DNA helicase recG C-terminal BBTM_01027 PF00270 DEAD/DEAH box helicase BBTM_01028 PF01380 SIS domain BBTM_01031 PF10410 DnaB-helicase binding domain of primase BBTM_01031 PF08278 DNA primase DnaG DnaB-binding BBTM_01031 PF01807 CHC2 zinc finger BBTM_01031 PF08275 DNA primase catalytic core, N-terminal domain BBTM_01031 PF13662 Toprim domain BBTM_01032 PF01966 HD domain BBTM_01032 PF13286 Phosphohydrolase-associated domain BBTM_01033 PF01168 Alanine racemase, N-terminal domain BBTM_01033 PF00842 Alanine racemase, C-terminal domain BBTM_01036 PF13520 Amino acid permease BBTM_01041 PF02664 S-Ribosylhomocysteinase (LuxS) BBTM_01045 PF00271 Helicase conserved C-terminal domain BBTM_01045 PF16124 RecQ zinc-binding BBTM_01045 PF00270 DEAD/DEAH box helicase BBTM_01045 PF09382 RQC domain BBTM_01045 PF00570 HRDC domain BBTM_01048 PF01053 Cys/Met metabolism PLP-dependent enzyme BBTM_01049 PF00291 Pyridoxal-phosphate dependent enzyme BBTM_01049 PF00571 CBS domain BBTM_01053 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBTM_01053 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBTM_01054 PF00005 ABC transporter BBTM_01054 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBTM_01056 PF00005 ABC transporter BBTM_01056 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBTM_01057 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_01059 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_01060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBTM_01062 PF03309 Type III pantothenate kinase BBTM_01067 PF08532 Beta-galactosidase trimerisation domain BBTM_01067 PF08533 Beta-galactosidase C-terminal domain BBTM_01067 PF02449 Beta-galactosidase BBTM_01068 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_01069 PF00356 Bacterial regulatory proteins, lacI family BBTM_01075 PF08264 Anticodon-binding domain of tRNA BBTM_01075 PF00133 tRNA synthetases class I (I, L, M and V) BBTM_01078 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BBTM_01080 PF00171 Aldehyde dehydrogenase family BBTM_01082 PF01145 SPFH domain / Band 7 family BBTM_01084 PF01053 Cys/Met metabolism PLP-dependent enzyme BBTM_01086 PF01053 Cys/Met metabolism PLP-dependent enzyme BBTM_01087 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBTM_01087 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBTM_01088 PF02595 Glycerate kinase family BBTM_01092 PF00005 ABC transporter BBTM_01092 PF12704 MacB-like periplasmic core domain BBTM_01092 PF02687 FtsX-like permease family BBTM_01096 PF00248 Aldo/keto reductase family BBTM_01097 PF00929 Exonuclease BBTM_01097 PF14579 Helix-hairpin-helix motif BBTM_01097 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BBTM_01097 PF11490 DNA polymerase III polC-type N-terminus II BBTM_01097 PF02811 PHP domain BBTM_01097 PF07733 Bacterial DNA polymerase III alpha NTPase domain BBTM_01098 PF00285 Citrate synthase, C-terminal domain BBTM_01101 PF00557 Metallopeptidase family M24 BBTM_01107 PF05649 Peptidase family M13 BBTM_01107 PF01431 Peptidase family M13 BBTM_01111 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBTM_01111 PF04073 Aminoacyl-tRNA editing domain BBTM_01111 PF03129 Anticodon binding domain BBTM_01115 PF05970 PIF1-like helicase BBTM_01115 PF14493 Helix-turn-helix domain BBTM_01118 PF00929 Exonuclease BBTM_01120 PF00072 Response regulator receiver domain BBTM_01120 PF00486 Transcriptional regulatory protein, C terminal BBTM_01121 PF00128 Alpha amylase, catalytic domain BBTM_01122 PF00478 IMP dehydrogenase / GMP reductase domain BBTM_01122 PF00571 CBS domain BBTM_01124 PF00953 Glycosyl transferase family 4 BBTM_01125 PF01300 Telomere recombination BBTM_01128 PF17827 PrmC N-terminal domain BBTM_01131 PF00472 RF-1 domain BBTM_01131 PF03462 PCRF domain BBTM_01132 PF01197 Ribosomal protein L31 BBTM_01135 PF06800 Sugar transport protein BBTM_01137 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BBTM_01137 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BBTM_01143 PF00872 Transposase, Mutator family BBTM_01145 PF00872 Transposase, Mutator family BBTM_01152 PF00270 DEAD/DEAH box helicase BBTM_01152 PF00271 Helicase conserved C-terminal domain BBTM_01159 PF02687 FtsX-like permease family BBTM_01159 PF12704 MacB-like periplasmic core domain BBTM_01160 PF01925 Sulfite exporter TauE/SafE BBTM_01165 PF01053 Cys/Met metabolism PLP-dependent enzyme BBTM_01167 PF07690 Major Facilitator Superfamily BBTM_01168 PF00480 ROK family BBTM_01171 PF07690 Major Facilitator Superfamily BBTM_01180 PF01470 Pyroglutamyl peptidase BBTM_01185 PF00005 ABC transporter BBTM_01185 PF12848 ABC transporter BBTM_01192 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BBTM_01193 PF00809 Pterin binding enzyme BBTM_01195 PF01227 GTP cyclohydrolase I BBTM_01197 PF17862 AAA+ lid domain BBTM_01197 PF01434 Peptidase family M41 BBTM_01197 PF00004 ATPase family associated with various cellular activities (AAA) BBTM_01199 PF01171 PP-loop family BBTM_01199 PF09179 TilS substrate binding domain BBTM_01203 PF00005 ABC transporter BBTM_01207 PF00535 Glycosyl transferase family 2 BBTM_01208 PF00465 Iron-containing alcohol dehydrogenase BBTM_01213 PF16363 GDP-mannose 4,6 dehydratase BBTM_01214 PF02390 Putative methyltransferase BBTM_01219 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BBTM_01220 PF02929 Beta galactosidase small chain BBTM_01220 PF16353 Domain of unknown function(DUF4981) BBTM_01220 PF00703 Glycosyl hydrolases family 2 BBTM_01220 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BBTM_01220 PF02837 Glycosyl hydrolases family 2, sugar binding domain BBTM_01221 PF01979 Amidohydrolase family BBTM_01223 PF00356 Bacterial regulatory proteins, lacI family BBTM_01224 PF00512 His Kinase A (phospho-acceptor) domain BBTM_01224 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_01229 PF00005 ABC transporter BBTM_01233 PF12704 MacB-like periplasmic core domain BBTM_01233 PF02687 FtsX-like permease family BBTM_01235 PF00005 ABC transporter BBTM_01236 PF05437 Branched-chain amino acid transport protein (AzlD) BBTM_01239 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BBTM_01239 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BBTM_01241 PF01451 Low molecular weight phosphotyrosine protein phosphatase BBTM_01243 PF00186 Dihydrofolate reductase BBTM_01244 PF00303 Thymidylate synthase BBTM_01245 PF02566 OsmC-like protein BBTM_01246 PF00582 Universal stress protein family BBTM_01248 PF00877 NlpC/P60 family BBTM_01248 PF01476 LysM domain BBTM_01248 PF08239 Bacterial SH3 domain BBTM_01249 PF01476 LysM domain BBTM_01249 PF05257 CHAP domain BBTM_01250 PF00266 Aminotransferase class-V BBTM_01253 PF00512 His Kinase A (phospho-acceptor) domain BBTM_01253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_01255 PF01895 PhoU domain BBTM_01258 PF00300 Histidine phosphatase superfamily (branch 1) BBTM_01259 PF01040 UbiA prenyltransferase family BBTM_01261 PF00152 tRNA synthetases class II (D, K and N) BBTM_01261 PF01336 OB-fold nucleic acid binding domain BBTM_01262 PF07690 Major Facilitator Superfamily BBTM_01270 PF00072 Response regulator receiver domain BBTM_01270 PF00196 Bacterial regulatory proteins, luxR family BBTM_01273 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BBTM_01273 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BBTM_01275 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BBTM_01278 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BBTM_01278 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BBTM_01287 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBTM_01287 PF02403 Seryl-tRNA synthetase N-terminal domain BBTM_01291 PF00746 LPXTG cell wall anchor motif BBTM_01291 PF02872 5'-nucleotidase, C-terminal domain BBTM_01291 PF00565 Staphylococcal nuclease homologue BBTM_01291 PF00149 Calcineurin-like phosphoesterase BBTM_01293 PF00781 Diacylglycerol kinase catalytic domain BBTM_01293 PF02142 MGS-like domain BBTM_01296 PF02378 Phosphotransferase system, EIIC BBTM_01296 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BBTM_01296 PF00367 phosphotransferase system, EIIB BBTM_01301 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBTM_01301 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBTM_01301 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBTM_01301 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBTM_01303 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBTM_01303 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBTM_01305 PF02838 Glycosyl hydrolase family 20, domain 2 BBTM_01305 PF00404 Dockerin type I domain BBTM_01305 PF07555 beta-N-acetylglucosaminidase BBTM_01305 PF00754 F5/8 type C domain BBTM_01307 PF00075 RNase H BBTM_01308 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BBTM_01310 PF18073 Rubredoxin metal binding domain BBTM_01312 PF01687 Riboflavin kinase BBTM_01312 PF06574 FAD synthetase BBTM_01314 PF09142 tRNA Pseudouridine synthase II, C terminal BBTM_01314 PF01509 TruB family pseudouridylate synthase (N terminal domain) BBTM_01314 PF16198 tRNA pseudouridylate synthase B C-terminal domain BBTM_01315 PF02033 Ribosome-binding factor A BBTM_01317 PF00009 Elongation factor Tu GTP binding domain BBTM_01317 PF11987 Translation-initiation factor 2 BBTM_01317 PF04760 Translation initiation factor IF-2, N-terminal region BBTM_01319 PF08529 NusA N-terminal domain BBTM_01319 PF13184 NusA-like KH domain BBTM_01326 PF14403 Circularly permuted ATP-grasp type 2 BBTM_01327 PF01416 tRNA pseudouridine synthase BBTM_01328 PF00728 Glycosyl hydrolase family 20, catalytic domain BBTM_01328 PF03173 Putative carbohydrate binding domain BBTM_01328 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BBTM_01328 PF02838 Glycosyl hydrolase family 20, domain 2 BBTM_01331 PF01196 Ribosomal protein L17 BBTM_01332 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BBTM_01332 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BBTM_01332 PF01000 RNA polymerase Rpb3/RpoA insert domain BBTM_01333 PF00411 Ribosomal protein S11 BBTM_01335 PF00416 Ribosomal protein S13/S18 BBTM_01336 PF00444 Ribosomal protein L36 BBTM_01337 PF01176 Translation initiation factor 1A / IF-1 BBTM_01341 PF00344 SecY translocase BBTM_01342 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BBTM_01343 PF00327 Ribosomal protein L30p/L7e BBTM_01344 PF03719 Ribosomal protein S5, C-terminal domain BBTM_01344 PF00333 Ribosomal protein S5, N-terminal domain BBTM_01345 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BBTM_01346 PF00347 Ribosomal protein L6 BBTM_01348 PF00410 Ribosomal protein S8 BBTM_01349 PF00253 Ribosomal protein S14p/S29e BBTM_01350 PF00281 Ribosomal protein L5 BBTM_01350 PF00673 ribosomal L5P family C-terminus BBTM_01351 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BBTM_01351 PF00467 KOW motif BBTM_01354 PF00238 Ribosomal protein L14p/L23e BBTM_01355 PF00366 Ribosomal protein S17 BBTM_01356 PF00831 Ribosomal L29 protein BBTM_01357 PF00252 Ribosomal protein L16p/L10e BBTM_01359 PF07650 KH domain BBTM_01359 PF00189 Ribosomal protein S3, C-terminal domain BBTM_01360 PF00237 Ribosomal protein L22p/L17e BBTM_01361 PF00203 Ribosomal protein S19 BBTM_01362 PF03947 Ribosomal Proteins L2, C-terminal domain BBTM_01362 PF00181 Ribosomal Proteins L2, RNA binding domain BBTM_01363 PF00276 Ribosomal protein L23 BBTM_01364 PF00573 Ribosomal protein L4/L1 family BBTM_01366 PF00297 Ribosomal protein L3 BBTM_01367 PF00338 Ribosomal protein S10p/S20e BBTM_01370 PF03306 Alpha-acetolactate decarboxylase BBTM_01372 PF00171 Aldehyde dehydrogenase family BBTM_01372 PF00465 Iron-containing alcohol dehydrogenase BBTM_01375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBTM_01375 PF00128 Alpha amylase, catalytic domain BBTM_01377 PF00380 Ribosomal protein S9/S16 BBTM_01378 PF00572 Ribosomal protein L13 BBTM_01381 PF02446 4-alpha-glucanotransferase BBTM_01384 PF09186 Domain of unknown function (DUF1949) BBTM_01384 PF01205 Uncharacterized protein family UPF0029 BBTM_01386 PF00817 impB/mucB/samB family BBTM_01386 PF11799 impB/mucB/samB family C-terminal domain BBTM_01386 PF11798 IMS family HHH motif BBTM_01387 PF00155 Aminotransferase class I and II BBTM_01388 PF00037 4Fe-4S binding domain BBTM_01390 PF01565 FAD binding domain BBTM_01390 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BBTM_01391 PF00471 Ribosomal protein L33 BBTM_01393 PF17863 AAA lid domain BBTM_01393 PF07726 ATPase family associated with various cellular activities (AAA) BBTM_01396 PF00166 Chaperonin 10 Kd subunit BBTM_01399 PF01812 5-formyltetrahydrofolate cyclo-ligase family BBTM_01408 PF00542 Ribosomal protein L7/L12 C-terminal domain BBTM_01408 PF16320 Ribosomal protein L7/L12 dimerisation domain BBTM_01410 PF00466 Ribosomal protein L10 BBTM_01411 PF07859 alpha/beta hydrolase fold BBTM_01411 PF13472 GDSL-like Lipase/Acylhydrolase family BBTM_01414 PF13859 BNR repeat-like domain BBTM_01418 PF00860 Permease family BBTM_01421 PF00005 ABC transporter BBTM_01422 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_01424 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_01425 PF12849 PBP superfamily domain BBTM_01427 PF00072 Response regulator receiver domain BBTM_01427 PF00486 Transcriptional regulatory protein, C terminal BBTM_01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_01430 PF00512 His Kinase A (phospho-acceptor) domain BBTM_01432 PF01048 Phosphorylase superfamily BBTM_01433 PF00793 DAHP synthetase I family BBTM_01439 PF00793 DAHP synthetase I family BBTM_01444 PF03051 Peptidase C1-like family BBTM_01447 PF01470 Pyroglutamyl peptidase BBTM_01449 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BBTM_01455 PF13936 Helix-turn-helix domain BBTM_01455 PF00665 Integrase core domain BBTM_01456 PF00248 Aldo/keto reductase family BBTM_01458 PF07972 NrdI Flavodoxin like BBTM_01459 PF00317 Ribonucleotide reductase, all-alpha domain BBTM_01459 PF08343 Ribonucleotide reductase N-terminal BBTM_01459 PF02867 Ribonucleotide reductase, barrel domain BBTM_01461 PF00268 Ribonucleotide reductase, small chain BBTM_01464 PF01053 Cys/Met metabolism PLP-dependent enzyme BBTM_01468 PF04011 LemA family BBTM_01469 PF00356 Bacterial regulatory proteins, lacI family BBTM_01469 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BBTM_01471 PF00575 S1 RNA binding domain BBTM_01471 PF01138 3' exoribonuclease family, domain 1 BBTM_01471 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BBTM_01471 PF00013 KH domain BBTM_01473 PF00312 Ribosomal protein S15 BBTM_01476 PF07555 beta-N-acetylglucosaminidase BBTM_01476 PF00754 F5/8 type C domain BBTM_01476 PF00404 Dockerin type I domain BBTM_01476 PF02838 Glycosyl hydrolase family 20, domain 2 BBTM_01484 PF01039 Carboxyl transferase domain BBTM_01486 PF00289 Biotin carboxylase, N-terminal domain BBTM_01486 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BBTM_01486 PF00364 Biotin-requiring enzyme BBTM_01486 PF02785 Biotin carboxylase C-terminal domain BBTM_01489 PF02632 BioY family BBTM_01491 PF02237 Biotin protein ligase C terminal domain BBTM_01491 PF03099 Biotin/lipoate A/B protein ligase family BBTM_01491 PF08279 HTH domain BBTM_01495 PF13556 PucR C-terminal helix-turn-helix domain BBTM_01495 PF17853 GGDEF-like domain BBTM_01496 PF01939 Endonuclease NucS BBTM_01498 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BBTM_01500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBTM_01500 PF02874 ATP synthase alpha/beta family, beta-barrel domain BBTM_01501 PF00231 ATP synthase BBTM_01502 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBTM_01502 PF00306 ATP synthase alpha/beta chain, C terminal domain BBTM_01502 PF02874 ATP synthase alpha/beta family, beta-barrel domain BBTM_01504 PF00213 ATP synthase delta (OSCP) subunit BBTM_01505 PF00430 ATP synthase B/B' CF(0) BBTM_01507 PF00137 ATP synthase subunit C BBTM_01508 PF00119 ATP synthase A chain BBTM_01509 PF04204 Homoserine O-succinyltransferase BBTM_01518 PF11896 Domain of unknown function (DUF3416) BBTM_01518 PF00128 Alpha amylase, catalytic domain BBTM_01519 PF00719 Inorganic pyrophosphatase BBTM_01520 PF02659 Putative manganese efflux pump BBTM_01524 PF00486 Transcriptional regulatory protein, C terminal BBTM_01526 PF00633 Helix-hairpin-helix motif BBTM_01526 PF10576 Iron-sulfur binding domain of endonuclease III BBTM_01526 PF00730 HhH-GPD superfamily base excision DNA repair protein BBTM_01527 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBTM_01529 PF08264 Anticodon-binding domain of tRNA BBTM_01529 PF00133 tRNA synthetases class I (I, L, M and V) BBTM_01534 PF01817 Chorismate mutase type II BBTM_01534 PF02153 Prephenate dehydrogenase BBTM_01536 PF01037 Lrp/AsnC ligand binding domain BBTM_01538 PF00155 Aminotransferase class I and II BBTM_01540 PF07497 Rho termination factor, RNA-binding domain BBTM_01540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBTM_01540 PF07498 Rho termination factor, N-terminal domain BBTM_01543 PF10611 Protein of unknown function (DUF2469) BBTM_01545 PF02934 GatB/GatE catalytic domain BBTM_01545 PF02637 GatB domain BBTM_01546 PF01425 Amidase BBTM_01548 PF02686 Glu-tRNAGln amidotransferase C subunit BBTM_01550 PF00005 ABC transporter BBTM_01554 PF02646 RmuC family BBTM_01556 PF02583 Metal-sensitive transcriptional repressor BBTM_01558 PF00403 Heavy-metal-associated domain BBTM_01560 PF03109 ABC1 family BBTM_01562 PF07685 CobB/CobQ-like glutamine amidotransferase domain BBTM_01563 PF08245 Mur ligase middle domain BBTM_01563 PF08353 Domain of unknown function (DUF1727) BBTM_01564 PF00772 DnaB-like helicase N terminal domain BBTM_01564 PF03796 DnaB-like helicase C terminal domain BBTM_01568 PF08335 GlnD PII-uridylyltransferase BBTM_01568 PF01966 HD domain BBTM_01568 PF01909 Nucleotidyltransferase domain BBTM_01569 PF00543 Nitrogen regulatory protein P-II BBTM_01572 PF00909 Ammonium Transporter Family BBTM_01574 PF00448 SRP54-type protein, GTPase domain BBTM_01574 PF02881 SRP54-type protein, helical bundle domain BBTM_01575 PF00440 Bacterial regulatory proteins, tetR family BBTM_01577 PF00535 Glycosyl transferase family 2 BBTM_01581 PF03577 Peptidase family C69 BBTM_01588 PF00664 ABC transporter transmembrane region BBTM_01588 PF00005 ABC transporter BBTM_01591 PF00664 ABC transporter transmembrane region BBTM_01591 PF00005 ABC transporter BBTM_01613 PF00232 Glycosyl hydrolase family 1 BBTM_01615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BBTM_01616 PF02378 Phosphotransferase system, EIIC BBTM_01620 PF00392 Bacterial regulatory proteins, gntR family BBTM_01622 PF00005 ABC transporter BBTM_01622 PF02687 FtsX-like permease family BBTM_01622 PF12704 MacB-like periplasmic core domain BBTM_01624 PF02687 FtsX-like permease family BBTM_01624 PF12704 MacB-like periplasmic core domain BBTM_01626 PF02687 FtsX-like permease family BBTM_01626 PF12704 MacB-like periplasmic core domain BBTM_01628 PF10634 Fe2+ transport protein BBTM_01629 PF03239 Iron permease FTR1 family BBTM_01633 PF07690 Major Facilitator Superfamily BBTM_01638 PF08532 Beta-galactosidase trimerisation domain BBTM_01638 PF02449 Beta-galactosidase BBTM_01641 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BBTM_01641 PF01610 Transposase BBTM_01641 PF13542 Helix-turn-helix domain of transposase family ISL3 BBTM_01645 PF00578 AhpC/TSA family BBTM_01649 PF02590 Predicted SPOUT methyltransferase BBTM_01653 PF02687 FtsX-like permease family BBTM_01653 PF00005 ABC transporter BBTM_01653 PF12704 MacB-like periplasmic core domain BBTM_01655 PF00324 Amino acid permease BBTM_01658 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BBTM_01658 PF02837 Glycosyl hydrolases family 2, sugar binding domain BBTM_01658 PF02929 Beta galactosidase small chain BBTM_01658 PF00703 Glycosyl hydrolases family 2 BBTM_01662 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BBTM_01662 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BBTM_01665 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BBTM_01665 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BBTM_01668 PF07690 Major Facilitator Superfamily BBTM_01668 PF00083 Sugar (and other) transporter BBTM_01671 PF00128 Alpha amylase, catalytic domain BBTM_01671 PF09244 Domain of unknown function (DUF1964) BBTM_01673 PF00356 Bacterial regulatory proteins, lacI family BBTM_01673 PF13407 Periplasmic binding protein domain BBTM_01674 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BBTM_01675 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BBTM_01676 PF00709 Adenylosuccinate synthetase BBTM_01681 PF01116 Fructose-bisphosphate aldolase class-II BBTM_01683 PF01522 Polysaccharide deacetylase BBTM_01686 PF03432 Relaxase/Mobilisation nuclease domain BBTM_01699 PF01435 Peptidase family M48 BBTM_01700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBTM_01702 PF00403 Heavy-metal-associated domain BBTM_01704 PF17820 PDZ domain BBTM_01704 PF13180 PDZ domain BBTM_01705 PF01702 Queuine tRNA-ribosyltransferase BBTM_01709 PF04972 BON domain BBTM_01709 PF01476 LysM domain BBTM_01711 PF00145 C-5 cytosine-specific DNA methylase BBTM_01713 PF09519 HindVP restriction endonuclease BBTM_01716 PF00589 Phage integrase family BBTM_01716 PF02899 Phage integrase, N-terminal SAM-like domain BBTM_01718 PF13276 HTH-like domain BBTM_01718 PF00665 Integrase core domain BBTM_01718 PF13333 Integrase core domain BBTM_01724 PF01906 Putative heavy-metal-binding BBTM_01727 PF00293 NUDIX domain BBTM_01728 PF00270 DEAD/DEAH box helicase BBTM_01728 PF00271 Helicase conserved C-terminal domain BBTM_01730 PF01641 SelR domain BBTM_01730 PF01625 Peptide methionine sulfoxide reductase BBTM_01737 PF01061 ABC-2 type transporter BBTM_01738 PF01061 ABC-2 type transporter BBTM_01740 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BBTM_01740 PF00326 Prolyl oligopeptidase family BBTM_01748 PF01098 Cell cycle protein BBTM_01750 PF00905 Penicillin binding protein transpeptidase domain BBTM_01751 PF00069 Protein kinase domain BBTM_01752 PF00069 Protein kinase domain BBTM_01752 PF03793 PASTA domain BBTM_01754 PF00117 Glutamine amidotransferase class-I BBTM_01757 PF06781 Cell division protein CrgA BBTM_01759 PF13333 Integrase core domain BBTM_01759 PF00665 Integrase core domain BBTM_01759 PF01527 Transposase BBTM_01759 PF13276 HTH-like domain BBTM_01765 PF00343 Carbohydrate phosphorylase BBTM_01767 PF00005 ABC transporter BBTM_01770 PF13276 HTH-like domain BBTM_01770 PF00665 Integrase core domain BBTM_01771 PF07690 Major Facilitator Superfamily BBTM_01775 PF13936 Helix-turn-helix domain BBTM_01776 PF00535 Glycosyl transferase family 2 BBTM_01780 PF14524 Wzt C-terminal domain BBTM_01780 PF00005 ABC transporter BBTM_01783 PF00483 Nucleotidyl transferase BBTM_01785 PF00872 Transposase, Mutator family BBTM_01786 PF13333 Integrase core domain BBTM_01786 PF00665 Integrase core domain BBTM_01786 PF01527 Transposase BBTM_01786 PF13276 HTH-like domain BBTM_01787 PF13276 HTH-like domain BBTM_01787 PF00665 Integrase core domain BBTM_01787 PF13333 Integrase core domain BBTM_01787 PF01527 Transposase BBTM_01792 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BBTM_01795 PF00872 Transposase, Mutator family BBTM_01797 PF16363 GDP-mannose 4,6 dehydratase BBTM_01799 PF00535 Glycosyl transferase family 2 BBTM_01802 PF00872 Transposase, Mutator family BBTM_01803 PF01183 Glycosyl hydrolases family 25 BBTM_01806 PF16363 GDP-mannose 4,6 dehydratase BBTM_01809 PF04397 LytTr DNA-binding domain BBTM_01809 PF00072 Response regulator receiver domain BBTM_01811 PF00579 tRNA synthetases class I (W and Y) BBTM_01818 PF00311 Phosphoenolpyruvate carboxylase BBTM_01823 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBTM_01824 PF10417 C-terminal domain of 1-Cys peroxiredoxin BBTM_01824 PF00578 AhpC/TSA family BBTM_01825 PF00484 Carbonic anhydrase BBTM_01828 PF00571 CBS domain BBTM_01828 PF03471 Transporter associated domain BBTM_01828 PF01595 Cyclin M transmembrane N-terminal domain BBTM_01831 PF00892 EamA-like transporter family BBTM_01832 PF00210 Ferritin-like domain BBTM_01836 PF03611 PTS system sugar-specific permease component BBTM_01838 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BBTM_01839 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BBTM_01840 PF00356 Bacterial regulatory proteins, lacI family BBTM_01846 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BBTM_01848 PF01741 Large-conductance mechanosensitive channel, MscL BBTM_01853 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BBTM_01853 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BBTM_01860 PF00356 Bacterial regulatory proteins, lacI family BBTM_01869 PF03989 DNA gyrase C-terminal domain, beta-propeller BBTM_01869 PF00521 DNA gyrase/topoisomerase IV, subunit A BBTM_01872 PF00986 DNA gyrase B subunit, carboxyl terminus BBTM_01872 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBTM_01872 PF01751 Toprim domain BBTM_01872 PF00204 DNA gyrase B BBTM_01873 PF05258 Dna[CI] antecedent, DciA BBTM_01874 PF02463 RecF/RecN/SMC N terminal domain BBTM_01877 PF02768 DNA polymerase III beta subunit, C-terminal domain BBTM_01877 PF02767 DNA polymerase III beta subunit, central domain BBTM_01877 PF00712 DNA polymerase III beta subunit, N-terminal domain BBTM_01879 PF00308 Bacterial dnaA protein BBTM_01879 PF08299 Bacterial dnaA protein helix-turn-helix BBTM_01880 PF00468 Ribosomal protein L34 BBTM_01881 PF00825 Ribonuclease P BBTM_01883 PF02096 60Kd inner membrane protein BBTM_01884 PF14804 Jag N-terminus BBTM_01884 PF01424 R3H domain BBTM_01885 PF02527 rRNA small subunit methyltransferase G BBTM_01886 PF13614 AAA domain BBTM_01887 PF02195 ParB-like nuclease domain BBTM_01887 PF17762 HTH domain found in ParB protein BBTM_01893 PF00293 NUDIX domain BBTM_01894 PF13735 tRNA nucleotidyltransferase domain 2 putative BBTM_01894 PF12627 Probable RNA and SrmB- binding site of polymerase A BBTM_01894 PF01743 Poly A polymerase head domain BBTM_01896 PF08544 GHMP kinases C terminal BBTM_01896 PF00288 GHMP kinases N terminal domain BBTM_01897 PF00398 Ribosomal RNA adenine dimethylase BBTM_01898 PF07501 G5 domain BBTM_01898 PF03990 G5-linked-Ubiquitin-like domain BBTM_01898 PF06737 Transglycosylase-like domain BBTM_01902 PF00069 Protein kinase domain BBTM_01902 PF00400 WD domain, G-beta repeat BBTM_01904 PF00005 ABC transporter BBTM_01904 PF17912 MalK OB fold domain BBTM_01904 PF03459 TOBE domain BBTM_01906 PF00665 Integrase core domain BBTM_01906 PF13936 Helix-turn-helix domain BBTM_01915 PF08032 RNA 2'-O ribose methyltransferase substrate binding BBTM_01915 PF00588 SpoU rRNA Methylase family BBTM_01918 PF00690 Cation transporter/ATPase, N-terminus BBTM_01918 PF00689 Cation transporting ATPase, C-terminus BBTM_01922 PF16875 Glycosyl hydrolase family 36 N-terminal domain BBTM_01922 PF16874 Glycosyl hydrolase family 36 C-terminal domain BBTM_01924 PF00692 dUTPase BBTM_01926 PF00999 Sodium/hydrogen exchanger family BBTM_01928 PF11734 TilS substrate C-terminal domain BBTM_01928 PF14437 MafB19-like deaminase BBTM_01928 PF01171 PP-loop family BBTM_01930 PF13291 ACT domain BBTM_01930 PF00291 Pyridoxal-phosphate dependent enzyme BBTM_01931 PF02146 Sir2 family BBTM_01934 PF01636 Phosphotransferase enzyme family BBTM_01937 PF00881 Nitroreductase family BBTM_01940 PF00300 Histidine phosphatase superfamily (branch 1) BBTM_01943 PF00356 Bacterial regulatory proteins, lacI family BBTM_01945 PF00245 Alkaline phosphatase BBTM_01946 PF00012 Hsp70 protein BBTM_01948 PF01025 GrpE BBTM_01951 PF00226 DnaJ domain BBTM_01951 PF01556 DnaJ C terminal domain BBTM_01953 PF13411 MerR HTH family regulatory protein BBTM_01954 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase BBTM_01954 PF00754 F5/8 type C domain BBTM_01954 PF13088 BNR repeat-like domain BBTM_01956 PF13088 BNR repeat-like domain BBTM_01956 PF00754 F5/8 type C domain BBTM_01956 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase BBTM_01957 PF13419 Haloacid dehalogenase-like hydrolase BBTM_01960 PF09335 SNARE associated Golgi protein BBTM_01961 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BBTM_01965 PF08264 Anticodon-binding domain of tRNA BBTM_01965 PF09334 tRNA synthetases class I (M) BBTM_01968 PF00356 Bacterial regulatory proteins, lacI family BBTM_01971 PF01026 TatD related DNase BBTM_01973 PF02705 K+ potassium transporter BBTM_01980 PF00005 ABC transporter BBTM_01988 PF05690 Thiazole biosynthesis protein ThiG BBTM_01995 PF00872 Transposase, Mutator family BBTM_02000 PF00293 NUDIX domain BBTM_02000 PF00300 Histidine phosphatase superfamily (branch 1) BBTM_02002 PF13090 Polyphosphate kinase C-terminal domain 2 BBTM_02002 PF02503 Polyphosphate kinase middle domain BBTM_02002 PF13089 Polyphosphate kinase N-terminal domain BBTM_02002 PF17941 Polyphosphate kinase C-terminal domain 1 BBTM_02003 PF13089 Polyphosphate kinase N-terminal domain BBTM_02003 PF17941 Polyphosphate kinase C-terminal domain 1 BBTM_02003 PF02503 Polyphosphate kinase middle domain BBTM_02003 PF13090 Polyphosphate kinase C-terminal domain 2 BBTM_02007 PF00437 Type II/IV secretion system protein BBTM_02014 PF00781 Diacylglycerol kinase catalytic domain BBTM_02016 PF12169 DNA polymerase III subunits gamma and tau domain III BBTM_02017 PF13662 Toprim domain BBTM_02017 PF02132 RecR protein BBTM_02018 PF00696 Amino acid kinase family BBTM_02018 PF01842 ACT domain BBTM_02018 PF13840 ACT domain BBTM_02020 PF13840 ACT domain BBTM_02020 PF01842 ACT domain BBTM_02020 PF00696 Amino acid kinase family BBTM_02024 PF02774 Semialdehyde dehydrogenase, dimerisation domain BBTM_02024 PF01118 Semialdehyde dehydrogenase, NAD binding domain BBTM_02034 PF08502 LeuA allosteric (dimerisation) domain BBTM_02034 PF00682 HMGL-like BBTM_02036 PF00912 Transglycosylase BBTM_02036 PF00905 Penicillin binding protein transpeptidase domain BBTM_02037 PF03275 UDP-galactopyranose mutase BBTM_02041 PF05922 Peptidase inhibitor I9 BBTM_02041 PF13860 FlgD Ig-like domain BBTM_02041 PF02225 PA domain BBTM_02041 PF00082 Subtilase family BBTM_02046 PF01131 DNA topoisomerase BBTM_02046 PF01751 Toprim domain BBTM_02046 PF13368 Topoisomerase C-terminal repeat BBTM_02047 PF02223 Thymidylate kinase BBTM_02050 PF12169 DNA polymerase III subunits gamma and tau domain III BBTM_02051 PF00356 Bacterial regulatory proteins, lacI family BBTM_02052 PF00391 PEP-utilising enzyme, mobile domain BBTM_02052 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BBTM_02052 PF00381 PTS HPr component phosphorylation site BBTM_02052 PF05524 PEP-utilising enzyme, N-terminal BBTM_02052 PF02896 PEP-utilising enzyme, TIM barrel domain BBTM_02053 PF05524 PEP-utilising enzyme, N-terminal BBTM_02053 PF00391 PEP-utilising enzyme, mobile domain BBTM_02053 PF02896 PEP-utilising enzyme, TIM barrel domain BBTM_02055 PF02661 Fic/DOC family BBTM_02055 PF13784 Fic/DOC family N-terminal BBTM_02059 PF00239 Resolvase, N terminal domain BBTM_02059 PF02796 Helix-turn-helix domain of resolvase BBTM_02069 PF00440 Bacterial regulatory proteins, tetR family BBTM_02069 PF02909 Tetracyclin repressor-like, C-terminal domain BBTM_02083 PF00248 Aldo/keto reductase family BBTM_02090 PF00005 ABC transporter BBTM_02090 PF00664 ABC transporter transmembrane region BBTM_02093 PF00005 ABC transporter BBTM_02093 PF00664 ABC transporter transmembrane region BBTM_02097 PF02368 Bacterial Ig-like domain (group 2) BBTM_02101 PF03577 Peptidase family C69 BBTM_02102 PF01268 Formate--tetrahydrofolate ligase BBTM_02112 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_02116 PF13419 Haloacid dehalogenase-like hydrolase BBTM_02118 PF00749 tRNA synthetases class I (E and Q), catalytic domain BBTM_02128 PF00330 Aconitase family (aconitate hydratase) BBTM_02130 PF00694 Aconitase C-terminal domain BBTM_02131 PF00176 SNF2 family N-terminal domain BBTM_02131 PF00271 Helicase conserved C-terminal domain BBTM_02131 PF04434 SWIM zinc finger BBTM_02137 PF01180 Dihydroorotate dehydrogenase BBTM_02139 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BBTM_02144 PF00440 Bacterial regulatory proteins, tetR family BBTM_02144 PF17932 Tetracyclin repressor-like, C-terminal domain BBTM_02146 PF00298 Ribosomal protein L11, RNA binding domain BBTM_02146 PF03946 Ribosomal protein L11, N-terminal domain BBTM_02147 PF00687 Ribosomal protein L1p/L10e family BBTM_02148 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBTM_02156 PF00356 Bacterial regulatory proteins, lacI family BBTM_02164 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain BBTM_02164 PF17385 Lacto-N-biose phosphorylase central domain BBTM_02164 PF17386 Lacto-N-biose phosphorylase C-terminal domain BBTM_02167 PF01042 Endoribonuclease L-PSP BBTM_02169 PF03009 Glycerophosphoryl diester phosphodiesterase family BBTM_02170 PF05746 DALR anticodon binding domain BBTM_02170 PF03485 Arginyl tRNA synthetase N terminal domain BBTM_02170 PF00750 tRNA synthetases class I (R) BBTM_02171 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BBTM_02171 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BBTM_02173 PF00367 phosphotransferase system, EIIB BBTM_02173 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BBTM_02173 PF02378 Phosphotransferase system, EIIC BBTM_02175 PF02378 Phosphotransferase system, EIIC BBTM_02175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BBTM_02175 PF00367 phosphotransferase system, EIIB BBTM_02176 PF03447 Homoserine dehydrogenase, NAD binding domain BBTM_02176 PF00742 Homoserine dehydrogenase BBTM_02176 PF01842 ACT domain BBTM_02177 PF00288 GHMP kinases N terminal domain BBTM_02179 PF00293 NUDIX domain BBTM_02179 PF02545 Maf-like protein BBTM_02183 PF00005 ABC transporter BBTM_02189 PF01546 Peptidase family M20/M25/M40 BBTM_02189 PF07687 Peptidase dimerisation domain BBTM_02195 PF10150 Ribonuclease E/G family BBTM_02196 PF00829 Ribosomal prokaryotic L21 protein BBTM_02197 PF01016 Ribosomal L27 protein BBTM_02202 PF01018 GTP1/OBG BBTM_02202 PF01926 50S ribosome-binding GTPase BBTM_02202 PF09269 Domain of unknown function (DUF1967) BBTM_02205 PF01472 PUA domain BBTM_02205 PF00696 Amino acid kinase family BBTM_02206 PF00155 Aminotransferase class I and II BBTM_02209 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BBTM_02210 PF02357 Transcription termination factor nusG BBTM_02214 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BBTM_02214 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BBTM_02215 PF07478 D-ala D-ala ligase C-terminus BBTM_02215 PF01820 D-ala D-ala ligase N-terminus BBTM_02216 PF03009 Glycerophosphoryl diester phosphodiesterase family BBTM_02218 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal BBTM_02218 PF17451 Glycosyl hydrolase 101 beta sandwich domain BBTM_02218 PF17974 Galactose-binding domain-like BBTM_02218 PF04650 YSIRK type signal peptide BBTM_02218 PF18080 Galactose mutarotase-like fold domain BBTM_02218 PF00754 F5/8 type C domain BBTM_02218 PF12905 Endo-alpha-N-acetylgalactosaminidase BBTM_02220 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BBTM_02220 PF14572 Phosphoribosyl synthetase-associated domain BBTM_02228 PF01250 Ribosomal protein S6 BBTM_02229 PF00436 Single-strand binding protein family BBTM_02231 PF01084 Ribosomal protein S18 BBTM_02232 PF03948 Ribosomal protein L9, C-terminal domain BBTM_02232 PF01281 Ribosomal protein L9, N-terminal domain BBTM_02236 PF00230 Major intrinsic protein BBTM_02240 PF00749 tRNA synthetases class I (E and Q), catalytic domain BBTM_02241 PF01168 Alanine racemase, N-terminal domain BBTM_02243 PF00708 Acylphosphatase BBTM_02251 PF01557 Fumarylacetoacetate (FAA) hydrolase family BBTM_02253 PF00004 ATPase family associated with various cellular activities (AAA) BBTM_02253 PF07724 AAA domain (Cdc48 subfamily) BBTM_02253 PF17871 AAA lid domain BBTM_02253 PF10431 C-terminal, D2-small domain, of ClpB protein BBTM_02253 PF02861 Clp amino terminal domain, pathogenicity island component BBTM_02259 PF00155 Aminotransferase class I and II BBTM_02266 PF00501 AMP-binding enzyme BBTM_02268 PF13649 Methyltransferase domain BBTM_02275 PF13411 MerR HTH family regulatory protein BBTM_02277 PF11700 Vacuole effluxer Atg22 like BBTM_02281 PF00830 Ribosomal L28 family BBTM_02282 PF00270 DEAD/DEAH box helicase BBTM_02282 PF00271 Helicase conserved C-terminal domain BBTM_02282 PF17191 RecG wedge domain BBTM_02292 PF00375 Sodium:dicarboxylate symporter family BBTM_02298 PF00011 Hsp20/alpha crystallin family BBTM_02299 PF01746 tRNA (Guanine-1)-methyltransferase BBTM_02300 PF01782 RimM N-terminal domain BBTM_02303 PF00886 Ribosomal protein S16 BBTM_02305 PF00392 Bacterial regulatory proteins, gntR family BBTM_02305 PF00155 Aminotransferase class I and II BBTM_02311 PF00448 SRP54-type protein, GTPase domain BBTM_02311 PF02881 SRP54-type protein, helical bundle domain BBTM_02311 PF02978 Signal peptide binding domain BBTM_02314 PF09190 DALR domain BBTM_02314 PF01406 tRNA synthetases class I (C) catalytic domain BBTM_02316 PF01406 tRNA synthetases class I (C) catalytic domain BBTM_02316 PF09190 DALR domain BBTM_02317 PF00958 GMP synthase C terminal domain BBTM_02317 PF00117 Glutamine amidotransferase class-I BBTM_02318 PF00005 ABC transporter BBTM_02318 PF12848 ABC transporter BBTM_02318 PF16326 ABC transporter C-terminal domain BBTM_02320 PF01467 Cytidylyltransferase-like BBTM_02325 PF01783 Ribosomal L32p protein family BBTM_02326 PF00035 Double-stranded RNA binding motif BBTM_02326 PF14622 Ribonuclease-III-like BBTM_02329 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BBTM_02329 PF00205 Thiamine pyrophosphate enzyme, central domain BBTM_02329 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBTM_02331 PF10369 Small subunit of acetolactate synthase BBTM_02333 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BBTM_02333 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BBTM_02334 PF03725 3' exoribonuclease family, domain 2 BBTM_02334 PF01138 3' exoribonuclease family, domain 1 BBTM_02335 PF01725 Ham1 family BBTM_02338 PF00342 Phosphoglucose isomerase BBTM_02347 PF02308 MgtC family BBTM_02349 PF00690 Cation transporter/ATPase, N-terminus BBTM_02349 PF00689 Cation transporting ATPase, C-terminus BBTM_02350 PF00689 Cation transporting ATPase, C-terminus BBTM_02350 PF00690 Cation transporter/ATPase, N-terminus BBTM_02352 PF00005 ABC transporter BBTM_02358 PF01261 Xylose isomerase-like TIM barrel BBTM_02360 PF01245 Ribosomal protein L19 BBTM_02361 PF10502 Signal peptidase, peptidase S26 BBTM_02363 PF01351 Ribonuclease HII BBTM_02364 PF00356 Bacterial regulatory proteins, lacI family BBTM_02368 PF00501 AMP-binding enzyme BBTM_02370 PF01680 SOR/SNZ family BBTM_02371 PF01174 SNO glutamine amidotransferase family BBTM_02375 PF00356 Bacterial regulatory proteins, lacI family BBTM_02379 PF00248 Aldo/keto reductase family BBTM_02381 PF03358 NADPH-dependent FMN reductase BBTM_02381 PF01566 Natural resistance-associated macrophage protein BBTM_02382 PF07690 Major Facilitator Superfamily BBTM_02387 PF00085 Thioredoxin BBTM_02391 PF00293 NUDIX domain BBTM_02391 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BBTM_02391 PF09297 NADH pyrophosphatase zinc ribbon domain BBTM_02393 PF01597 Glycine cleavage H-protein BBTM_02398 PF00326 Prolyl oligopeptidase family BBTM_02398 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BBTM_02400 PF00180 Isocitrate/isopropylmalate dehydrogenase BBTM_02403 PF10437 Bacterial lipoate protein ligase C-terminus BBTM_02403 PF03099 Biotin/lipoate A/B protein ligase family BBTM_02404 PF13545 Crp-like helix-turn-helix domain BBTM_02404 PF00027 Cyclic nucleotide-binding domain BBTM_02408 PF00912 Transglycosylase BBTM_02408 PF00905 Penicillin binding protein transpeptidase domain BBTM_02409 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BBTM_02411 PF01180 Dihydroorotate dehydrogenase BBTM_02412 PF08220 DeoR-like helix-turn-helix domain BBTM_02412 PF00455 DeoR C terminal sensor domain BBTM_02414 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BBTM_02414 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BBTM_02416 PF08544 GHMP kinases C terminal BBTM_02416 PF00288 GHMP kinases N terminal domain BBTM_02416 PF10509 Galactokinase galactose-binding signature BBTM_02419 PF07690 Major Facilitator Superfamily BBTM_02419 PF00083 Sugar (and other) transporter BBTM_02424 PF05167 Uncharacterised ACR (DUF711) BBTM_02428 PF00588 SpoU rRNA Methylase family BBTM_02432 PF00633 Helix-hairpin-helix motif BBTM_02432 PF00730 HhH-GPD superfamily base excision DNA repair protein BBTM_02434 PF04563 RNA polymerase beta subunit BBTM_02434 PF10385 RNA polymerase beta subunit external 1 domain BBTM_02434 PF04561 RNA polymerase Rpb2, domain 2 BBTM_02434 PF00562 RNA polymerase Rpb2, domain 6 BBTM_02434 PF04560 RNA polymerase Rpb2, domain 7 BBTM_02434 PF04565 RNA polymerase Rpb2, domain 3 BBTM_02437 PF04983 RNA polymerase Rpb1, domain 3 BBTM_02437 PF04997 RNA polymerase Rpb1, domain 1 BBTM_02437 PF05000 RNA polymerase Rpb1, domain 4 BBTM_02437 PF04998 RNA polymerase Rpb1, domain 5 BBTM_02437 PF00623 RNA polymerase Rpb1, domain 2 BBTM_02450 PF17863 AAA lid domain BBTM_02450 PF07726 ATPase family associated with various cellular activities (AAA) BBTM_02454 PF00069 Protein kinase domain BBTM_02454 PF03793 PASTA domain BBTM_02460 PF00580 UvrD/REP helicase N-terminal domain BBTM_02460 PF13361 UvrD-like helicase C-terminal domain BBTM_02470 PF01113 Dihydrodipicolinate reductase, N-terminus BBTM_02470 PF05173 Dihydrodipicolinate reductase, C-terminus BBTM_02471 PF00701 Dihydrodipicolinate synthetase family BBTM_02473 PF12706 Beta-lactamase superfamily domain BBTM_02473 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BBTM_02473 PF17770 Ribonuclease J C-terminal domain BBTM_02475 PF11838 ERAP1-like C-terminal domain BBTM_02475 PF01433 Peptidase family M1 domain BBTM_02478 PF00082 Subtilase family BBTM_02479 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBTM_02479 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBTM_02479 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBTM_02479 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBTM_02481 PF01327 Polypeptide deformylase BBTM_02485 PF03852 DNA mismatch endonuclease Vsr BBTM_02488 PF02541 Ppx/GppA phosphatase family BBTM_02490 PF02541 Ppx/GppA phosphatase family BBTM_02492 PF00581 Rhodanese-like domain BBTM_02492 PF00899 ThiF family BBTM_02494 PF13686 DsrE/DsrF/DrsH-like family BBTM_02496 PF01156 Inosine-uridine preferring nucleoside hydrolase BBTM_02498 PF00356 Bacterial regulatory proteins, lacI family BBTM_02501 PF02609 Exonuclease VII small subunit BBTM_02502 PF13742 OB-fold nucleic acid binding domain BBTM_02502 PF02601 Exonuclease VII, large subunit BBTM_02504 PF03477 ATP cone domain BBTM_02504 PF13597 Anaerobic ribonucleoside-triphosphate reductase BBTM_02514 PF01385 Probable transposase BBTM_02514 PF07282 Putative transposase DNA-binding domain BBTM_02514 PF12323 Helix-turn-helix domain BBTM_02525 PF01047 MarR family BBTM_02527 PF00005 ABC transporter BBTM_02527 PF00664 ABC transporter transmembrane region BBTM_02530 PF00005 ABC transporter BBTM_02530 PF00664 ABC transporter transmembrane region BBTM_02532 PF01177 Asp/Glu/Hydantoin racemase BBTM_02534 PF01678 Diaminopimelate epimerase BBTM_02538 PF02811 PHP domain BBTM_02542 PF13361 UvrD-like helicase C-terminal domain BBTM_02542 PF00580 UvrD/REP helicase N-terminal domain BBTM_02542 PF00570 HRDC domain BBTM_02543 PF13361 UvrD-like helicase C-terminal domain BBTM_02543 PF00580 UvrD/REP helicase N-terminal domain BBTM_02543 PF00570 HRDC domain BBTM_02547 PF05362 Lon protease (S16) C-terminal proteolytic domain BBTM_02547 PF13180 PDZ domain BBTM_02548 PF11253 Protein of unknown function (DUF3052) BBTM_02551 PF00356 Bacterial regulatory proteins, lacI family BBTM_02553 PF00872 Transposase, Mutator family BBTM_02555 PF01910 Thiamine-binding protein BBTM_02556 PF08543 Phosphomethylpyrimidine kinase BBTM_02558 PF01434 Peptidase family M41 BBTM_02558 PF00004 ATPase family associated with various cellular activities (AAA) BBTM_02558 PF17862 AAA+ lid domain BBTM_02561 PF02581 Thiamine monophosphate synthase BBTM_02561 PF01964 Radical SAM ThiC family BBTM_02561 PF13667 ThiC-associated domain BBTM_02562 PF02110 Hydroxyethylthiazole kinase family BBTM_02563 PF02837 Glycosyl hydrolases family 2, sugar binding domain BBTM_02563 PF16355 Domain of unknown function (DUF4982) BBTM_02563 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BBTM_02563 PF00703 Glycosyl hydrolases family 2 BBTM_02563 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BBTM_02566 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBTM_02566 PF03129 Anticodon binding domain BBTM_02567 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBTM_02567 PF03129 Anticodon binding domain BBTM_02570 PF01207 Dihydrouridine synthase (Dus) BBTM_02572 PF12327 FtsZ family, C-terminal domain BBTM_02572 PF00091 Tubulin/FtsZ family, GTPase domain BBTM_02573 PF04472 Cell division protein SepF BBTM_02579 PF01252 Signal peptidase (SPase) II BBTM_02580 PF00849 RNA pseudouridylate synthase BBTM_02583 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BBTM_02583 PF14602 Hexapeptide repeat of succinyl-transferase BBTM_02586 PF00472 RF-1 domain BBTM_02586 PF03462 PCRF domain BBTM_02587 PF00005 ABC transporter BBTM_02590 PF18075 FtsX extracellular domain BBTM_02590 PF02687 FtsX-like permease family BBTM_02592 PF05257 CHAP domain BBTM_02592 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BBTM_02593 PF01668 SmpB protein BBTM_02594 PF00849 RNA pseudouridylate synthase BBTM_02601 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BBTM_02601 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BBTM_02601 PF13288 DXP reductoisomerase C-terminal domain BBTM_02602 PF04551 GcpE protein BBTM_02605 PF02565 Recombination protein O C terminal BBTM_02605 PF11967 Recombination protein O N terminal BBTM_02606 PF01255 Putative undecaprenyl diphosphate synthase BBTM_02607 PF09234 Domain of unknown function (DUF1963) BBTM_02609 PF00251 Glycosyl hydrolases family 32 N-terminal domain BBTM_02609 PF08244 Glycosyl hydrolases family 32 C terminal BBTM_02610 PF08244 Glycosyl hydrolases family 32 C terminal BBTM_02610 PF00251 Glycosyl hydrolases family 32 N-terminal domain BBTM_02612 PF14579 Helix-hairpin-helix motif BBTM_02612 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BBTM_02612 PF02811 PHP domain BBTM_02612 PF07733 Bacterial DNA polymerase III alpha NTPase domain BBTM_02617 PF06100 MCRA family BBTM_02619 PF08299 Bacterial dnaA protein helix-turn-helix BBTM_02619 PF11638 DnaA N-terminal domain BBTM_02619 PF00308 Bacterial dnaA protein BBTM_02622 PF00248 Aldo/keto reductase family BBTM_02624 PF00248 Aldo/keto reductase family BBTM_02627 PF13811 Domain of unknown function (DUF4186) BBTM_02634 PF00815 Histidinol dehydrogenase BBTM_02636 PF00155 Aminotransferase class I and II BBTM_02637 PF00475 Imidazoleglycerol-phosphate dehydratase BBTM_02640 PF00117 Glutamine amidotransferase class-I BBTM_02641 PF00977 Histidine biosynthesis protein BBTM_02644 PF03951 Glutamine synthetase, beta-Grasp domain BBTM_02644 PF00120 Glutamine synthetase, catalytic domain BBTM_02653 PF00270 DEAD/DEAH box helicase BBTM_02653 PF11898 Domain of unknown function (DUF3418) BBTM_02653 PF00271 Helicase conserved C-terminal domain BBTM_02653 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BBTM_02653 PF04408 Helicase associated domain (HA2) BBTM_02654 PF05175 Methyltransferase small domain BBTM_02654 PF08468 Methyltransferase small domain N-terminal BBTM_02659 PF16360 GTP-binding GTPase Middle Region BBTM_02659 PF13167 GTP-binding GTPase N-terminal BBTM_02659 PF01926 50S ribosome-binding GTPase BBTM_02660 PF00056 lactate/malate dehydrogenase, NAD binding domain BBTM_02660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BBTM_02662 PF01545 Cation efflux family BBTM_02663 PF00717 Peptidase S24-like BBTM_02663 PF01726 LexA DNA binding domain BBTM_02665 PF03477 ATP cone domain BBTM_02667 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBTM_02667 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBTM_02670 PF02381 MraZ protein, putative antitoxin-like BBTM_02671 PF01795 MraW methylase family BBTM_02674 PF03717 Penicillin-binding Protein dimerisation domain BBTM_02674 PF00905 Penicillin binding protein transpeptidase domain BBTM_02678 PF02875 Mur ligase family, glutamate ligase domain BBTM_02678 PF01225 Mur ligase family, catalytic domain BBTM_02678 PF08245 Mur ligase middle domain BBTM_02679 PF00953 Glycosyl transferase family 4 BBTM_02682 PF02875 Mur ligase family, glutamate ligase domain BBTM_02682 PF08245 Mur ligase middle domain BBTM_02683 PF01098 Cell cycle protein BBTM_02684 PF04101 Glycosyltransferase family 28 C-terminal domain BBTM_02684 PF03033 Glycosyltransferase family 28 N-terminal domain BBTM_02686 PF01225 Mur ligase family, catalytic domain BBTM_02686 PF02875 Mur ligase family, glutamate ligase domain BBTM_02686 PF08245 Mur ligase middle domain BBTM_02692 PF02580 D-Tyr-tRNA(Tyr) deacylase BBTM_02696 PF00480 ROK family BBTM_02696 PF01047 MarR family BBTM_02697 PF03932 CutC family BBTM_02699 PF00480 ROK family BBTM_02700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BBTM_02702 PF01979 Amidohydrolase family BBTM_02705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBTM_02707 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_02709 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_02710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBTM_02710 PF00005 ABC transporter BBTM_02712 PF00557 Metallopeptidase family M24 BBTM_02712 PF05195 Aminopeptidase P, N-terminal domain BBTM_02714 PF13344 Haloacid dehalogenase-like hydrolase BBTM_02714 PF00293 NUDIX domain BBTM_02717 PF02875 Mur ligase family, glutamate ligase domain BBTM_02717 PF08245 Mur ligase middle domain BBTM_02718 PF08245 Mur ligase middle domain BBTM_02718 PF02875 Mur ligase family, glutamate ligase domain BBTM_02721 PF02463 RecF/RecN/SMC N terminal domain BBTM_02721 PF06470 SMC proteins Flexible Hinge Domain BBTM_02723 PF01177 Asp/Glu/Hydantoin racemase BBTM_02731 PF08245 Mur ligase middle domain BBTM_02731 PF02875 Mur ligase family, glutamate ligase domain BBTM_02733 PF08281 Sigma-70, region 4 BBTM_02733 PF04542 Sigma-70 region 2 BBTM_02736 PF01263 Aldose 1-epimerase BBTM_02737 PF02401 LytB protein BBTM_02739 PF04073 Aminoacyl-tRNA editing domain BBTM_02740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BBTM_02740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BBTM_02746 PF00707 Translation initiation factor IF-3, C-terminal domain BBTM_02746 PF05198 Translation initiation factor IF-3, N-terminal domain BBTM_02747 PF01632 Ribosomal protein L35 BBTM_02749 PF00453 Ribosomal protein L20 BBTM_02750 PF00589 Phage integrase family BBTM_02750 PF02899 Phage integrase, N-terminal SAM-like domain BBTM_02752 PF13614 AAA domain BBTM_02753 PF02616 Segregation and condensation protein ScpA BBTM_02754 PF04079 Segregation and condensation complex subunit ScpB BBTM_02758 PF02445 Quinolinate synthetase A protein BBTM_02760 PF00890 FAD binding domain BBTM_02760 PF02910 Fumarate reductase flavoprotein C-term BBTM_02762 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BBTM_02762 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BBTM_02763 PF00266 Aminotransferase class-V BBTM_02768 PF02153 Prephenate dehydrogenase BBTM_02770 PF00589 Phage integrase family BBTM_02770 PF02899 Phage integrase, N-terminal SAM-like domain BBTM_02771 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_02773 PF00528 Binding-protein-dependent transport system inner membrane component BBTM_02773 PF12911 N-terminal TM domain of oligopeptide transport permease C BBTM_02775 PF00005 ABC transporter BBTM_02775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBTM_02776 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBTM_02779 PF03051 Peptidase C1-like family BBTM_02781 PF03372 Endonuclease/Exonuclease/phosphatase family BBTM_02786 PF05958 tRNA (Uracil-5-)-methyltransferase BBTM_02790 PF00330 Aconitase family (aconitate hydratase) BBTM_02790 PF00694 Aconitase C-terminal domain BBTM_02795 PF00920 Dehydratase family BBTM_02797 PF01192 RNA polymerase Rpb6 BBTM_02798 PF02772 S-adenosylmethionine synthetase, central domain BBTM_02798 PF00438 S-adenosylmethionine synthetase, N-terminal domain BBTM_02798 PF02773 S-adenosylmethionine synthetase, C-terminal domain BBTM_02800 PF17764 3′ DNA-binding domain (3′BD) BBTM_02806 PF13419 Haloacid dehalogenase-like hydrolase BBTM_02808 PF02911 Formyl transferase, C-terminal domain BBTM_02808 PF00551 Formyl transferase BBTM_02813 PF17758 Proteasomal ATPase OB N-terminal domain BBTM_02813 PF16450 Proteasomal ATPase OB C-terminal domain BBTM_02813 PF00004 ATPase family associated with various cellular activities (AAA) BBTM_02815 PF03136 Pup-ligase protein BBTM_02817 PF00459 Inositol monophosphatase family BBTM_02821 PF03136 Pup-ligase protein BBTM_02822 PF00216 Bacterial DNA-binding protein BBTM_02826 PF00206 Lyase BBTM_02826 PF08328 Adenylosuccinate lyase C-terminal