locus-tag	class	description
FYA51_00015	COG1192	Involved in chromosome partitioning
FYA51_00025	COG1475	DNA binding
FYA51_00030	COG0252	asparaginase activity
FYA51_00050	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FYA51_00060	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYA51_00070	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FYA51_00075	COG0081	regulation of translation
FYA51_00080	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FYA51_00085	COG0222	ribosome binding
FYA51_00095	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FYA51_00130	COG1230	cation diffusion facilitator family transporter
FYA51_00140	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FYA51_00145	COG0049	tRNA binding
FYA51_00155	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FYA51_00165	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FYA51_00170	COG0088	Forms part of the polypeptide exit tunnel
FYA51_00175	COG0089	rRNA binding
FYA51_00180	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FYA51_00185	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FYA51_00190	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FYA51_00195	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FYA51_00200	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FYA51_00205	COG0255	Belongs to the universal ribosomal protein uL29 family
FYA51_00210	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FYA51_00230	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FYA51_00235	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FYA51_00240	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FYA51_00245	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FYA51_00250	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FYA51_00255	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FYA51_00260	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FYA51_00265	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FYA51_00270	COG1841	ribosomal large subunit assembly
FYA51_00280	COG0201	protein transport
FYA51_00285	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FYA51_00290	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FYA51_00295	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FYA51_00300	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FYA51_00305	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FYA51_00310	COG0202	RNA polymerase activity
FYA51_00315	COG0203	ribosomal protein L17
FYA51_00320	COG0537	adenosine 5'-monophosphoramidase activity
FYA51_00325	COG1324	tolerance protein
FYA51_00330	COG4232	protein-disulfide reductase activity
FYA51_00345	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FYA51_00355	COG1333	cytochrome c biogenesis protein
FYA51_00360	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA51_00375	COG1965	Belongs to the frataxin family
FYA51_00390	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FYA51_00410	COG2814	Major facilitator Superfamily
FYA51_00465	COG0438	transferase activity, transferring glycosyl groups
FYA51_00485	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_00510	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FYA51_00515	COG2186	Transcriptional regulator
FYA51_00535	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA51_00540	COG1956	GAF domain-containing protein
FYA51_00545	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA51_00575	COG0531	amino acid
FYA51_00605	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FYA51_00610	COG3568	Endonuclease Exonuclease Phosphatase
FYA51_00615	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA51_00635	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA51_00645	COG0367	asparagine synthase
FYA51_00665	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYA51_00670	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYA51_00710	COG0367	asparagine synthase
FYA51_00715	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FYA51_00740	COG0367	asparagine synthase
FYA51_00750	COG0438	transferase activity, transferring glycosyl groups
FYA51_00770	COG0438	transferase activity, transferring glycosyl groups
FYA51_00775	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FYA51_00780	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FYA51_00810	COG0859	PFAM glycosyl transferase family 9
FYA51_00840	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FYA51_00845	COG1127	ABC transporter
FYA51_00865	COG1686	Belongs to the peptidase S11 family
FYA51_00905	COG2096	Adenosyltransferase
FYA51_00920	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FYA51_00925	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FYA51_00930	COG0523	cobalamin synthesis protein
FYA51_00935	COG0735	belongs to the Fur family
FYA51_00940	COG1121	(ABC) transporter
FYA51_00950	COG0803	Belongs to the bacterial solute-binding protein 9 family
FYA51_00960	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FYA51_00970	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FYA51_00980	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FYA51_00985	COG1560	Kdo2-lipid A biosynthetic process
FYA51_00995	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FYA51_01010	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FYA51_01015	COG1950	PFAM Membrane protein of
FYA51_01025	COG0583	DNA-binding transcription factor activity
FYA51_01035	COG0477	Major facilitator Superfamily
FYA51_01060	COG0513	Belongs to the DEAD box helicase family
FYA51_01070	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA51_01075	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYA51_01090	COG0735	belongs to the Fur family
FYA51_01100	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FYA51_01110	COG0438	transferase activity, transferring glycosyl groups
FYA51_01135	COG0640	Transcriptional regulator
FYA51_01175	COG0411	ABC transporter
FYA51_01195	COG0583	DNA-binding transcription factor activity
FYA51_01210	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FYA51_01215	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA51_01220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA51_01235	COG0758	DNA mediated transformation
FYA51_01240	COG1522	sequence-specific DNA binding
FYA51_01250	COG0242	peptide deformylase activity
FYA51_01265	COG0546	phosphoglycolate phosphatase activity
FYA51_01290	COG1942	4-Oxalocrotonate Tautomerase
FYA51_01295	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA51_01330	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FYA51_01330	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYA51_01340	COG5000	phosphorelay sensor kinase activity
FYA51_01345	COG2204	response regulator
FYA51_01350	COG0569	domain protein
FYA51_01370	COG2068	MobA-Related Protein
FYA51_01385	COG0596	Alpha beta hydrolase
FYA51_01390	COG2309	aminopeptidase activity
FYA51_01395	COG1335	isochorismatase
FYA51_01420	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA51_01445	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA51_01450	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_01465	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FYA51_01470	COG2226	methyltransferase
FYA51_01495	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FYA51_01500	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA51_01515	COG4942	peptidase
FYA51_01520	COG0793	Belongs to the peptidase S41A family
FYA51_01525	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FYA51_01540	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FYA51_01545	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA51_01580	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FYA51_01585	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FYA51_01590	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FYA51_01600	COG0142	geranyltranstransferase activity
FYA51_01610	COG0583	DNA-binding transcription factor activity
FYA51_01620	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
FYA51_01625	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA51_01640	COG2994	toxin metabolic process
FYA51_01650	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
FYA51_01655	COG2274	protein secretion by the type I secretion system
FYA51_01660	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA51_01665	COG1538	Outer membrane efflux protein
FYA51_01680	COG0765	amino acid transport
FYA51_01685	COG0765	amino acid transport
FYA51_01690	COG1126	abc transporter atp-binding protein
FYA51_01710	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_01720	COG1802	Transcriptional regulator
FYA51_01735	COG1802	Transcriptional regulator
FYA51_01745	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_01755	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_01765	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYA51_01785	COG0583	DNA-binding transcription factor activity
FYA51_01790	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_01795	COG2301	Belongs to the HpcH HpaI aldolase family
FYA51_01800	COG2188	Transcriptional regulator
FYA51_01845	COG0583	DNA-binding transcription factor activity
FYA51_01850	COG1024	Enoyl-CoA hydratase
FYA51_01865	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_01875	COG0411	ABC transporter
FYA51_01885	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_01895	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_01900	COG1902	pentaerythritol trinitrate reductase activity
FYA51_01925	COG0745	RESPONSE REGULATOR receiver
FYA51_01955	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FYA51_01965	COG2890	protein-(glutamine-N5) methyltransferase activity
FYA51_01970	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FYA51_01980	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_02035	COG0410	ABC transporter
FYA51_02050	COG4211	Belongs to the binding-protein-dependent transport system permease family
FYA51_02060	COG0683	leucine binding
FYA51_02065	COG0154	amidase activity
FYA51_02070	COG0288	reversible hydration of carbon dioxide
FYA51_02090	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYA51_02105	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FYA51_02115	COG1414	Transcriptional regulator
FYA51_02120	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_02125	COG2031	fatty acid transporter
FYA51_02130	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA51_02160	COG2808	Putative FMN-binding domain
FYA51_02165	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA51_02170	COG0747	negative chemotaxis
FYA51_02175	COG0657	acetylesterase activity
FYA51_02185	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYA51_02190	COG2207	Transcriptional regulator
FYA51_02195	COG0129	dihydroxy-acid dehydratase activity
FYA51_02215	COG1538	Outer membrane efflux protein
FYA51_02230	COG0583	DNA-binding transcription factor activity
FYA51_02235	COG0628	permease
FYA51_02245	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FYA51_02250	COG0251	oxidation-reduction process
FYA51_02260	COG0330	HflC and HflK could
FYA51_02280	COG0583	DNA-binding transcription factor activity
FYA51_02315	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_02320	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_02325	COG1414	Transcriptional regulator
FYA51_02330	COG1024	Enoyl-CoA hydratase
FYA51_02335	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA51_02340	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_02345	COG0604	alcohol dehydrogenase
FYA51_02350	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_02355	COG0583	DNA-binding transcription factor activity
FYA51_02365	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_02380	COG0251	oxidation-reduction process
FYA51_02390	COG2031	fatty acid transporter
FYA51_02420	COG1278	Cold shock
FYA51_02425	COG0583	DNA-binding transcription factor activity
FYA51_02435	COG3119	arylsulfatase activity
FYA51_02450	COG1228	amidohydrolase
FYA51_02455	COG0523	cobalamin synthesis protein
FYA51_02460	COG1819	glycosyl
FYA51_02545	COG0625	glutathione transferase activity
FYA51_02560	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA51_02565	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FYA51_02570	COG1652	LysM domain
FYA51_02585	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FYA51_02595	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_02600	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYA51_02635	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA51_02690	COG0583	DNA-binding transcription factor activity
FYA51_02695	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_02700	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA51_02705	COG1024	Enoyl-CoA hydratase
FYA51_02710	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_02735	COG0028	Belongs to the TPP enzyme family
FYA51_02750	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_02755	COG1414	Transcriptional regulator
FYA51_02775	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_02780	COG1609	Transcriptional regulator
FYA51_02810	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA51_02815	COG1024	Enoyl-CoA hydratase
FYA51_02830	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_02835	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_02840	COG0583	DNA-binding transcription factor activity
FYA51_02855	COG1960	acyl-CoA dehydrogenase activity
FYA51_02870	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FYA51_02880	COG1053	succinate dehydrogenase
FYA51_02880	COG3976	FMN-binding domain protein
FYA51_02895	COG0410	ABC transporter
FYA51_02915	COG0683	leucine binding
FYA51_02925	COG1309	transcriptional regulator
FYA51_02945	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_02950	COG1960	acyl-CoA dehydrogenase activity
FYA51_02955	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_02960	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_02970	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FYA51_02980	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FYA51_02995	COG2030	dehydratase
FYA51_03005	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_03010	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_03015	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_03040	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_03060	COG1902	pentaerythritol trinitrate reductase activity
FYA51_03060	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYA51_03075	COG0427	acetyl-CoA hydrolase
FYA51_03080	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_03095	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FYA51_03115	COG0183	Belongs to the thiolase family
FYA51_03120	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA51_03130	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_03135	COG0583	DNA-binding transcription factor activity
FYA51_03140	COG1960	acyl-CoA dehydrogenase activity
FYA51_03155	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FYA51_03180	COG1309	transcriptional regulator
FYA51_03190	COG1024	Enoyl-CoA hydratase
FYA51_03210	COG1024	Enoyl-CoA hydratase
FYA51_03215	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_03220	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_03225	COG1454	alcohol dehydrogenase
FYA51_03230	COG1024	Enoyl-CoA hydratase
FYA51_03250	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_03255	COG0431	NADPH-dependent FMN reductase
FYA51_03260	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_03265	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA51_03280	COG1414	Transcriptional regulator
FYA51_03285	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA51_03290	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_03295	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_03320	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_03340	COG1024	Enoyl-CoA hydratase
FYA51_03350	COG1960	acyl-CoA dehydrogenase activity
FYA51_03355	COG1024	Enoyl-CoA hydratase
FYA51_03360	COG0183	Belongs to the thiolase family
FYA51_03365	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_03380	COG0583	DNA-binding transcription factor activity
FYA51_03385	COG2267	carboxylic ester hydrolase activity
FYA51_03400	COG0625	glutathione transferase activity
FYA51_03405	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_03415	COG2186	Transcriptional regulator
FYA51_03420	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_03425	COG0626	cystathionine gamma-synthase activity
FYA51_03465	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA51_03495	COG1414	Transcriptional regulator
FYA51_03505	COG0154	amidase activity
FYA51_03565	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA51_03580	COG3135	benzoate transporter
FYA51_03605	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYA51_03625	COG5444	nuclease activity
FYA51_03745	COG3468	outer membrane autotransporter barrel domain protein
FYA51_03755	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FYA51_03810	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYA51_03855	COG0489	protein tyrosine kinase activity
FYA51_03870	COG0717	Belongs to the dCTP deaminase family
FYA51_03895	COG1982	Orn Lys Arg decarboxylase major
FYA51_03900	COG2081	HI0933 family
FYA51_03905	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA51_03920	COG0509	glycine decarboxylation via glycine cleavage system
FYA51_03945	COG1024	Enoyl-CoA hydratase
FYA51_03965	COG4172	Belongs to the ABC transporter superfamily
FYA51_03970	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_03975	COG0601	transmembrane transport
FYA51_03980	COG0747	negative chemotaxis
FYA51_04005	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FYA51_04015	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
FYA51_04020	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYA51_04025	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FYA51_04040	COG0438	transferase activity, transferring glycosyl groups
FYA51_04055	COG0438	transferase activity, transferring glycosyl groups
FYA51_04060	COG0438	transferase activity, transferring glycosyl groups
FYA51_04065	COG0166	Belongs to the GPI family
FYA51_04080	COG0277	FAD linked oxidase domain protein
FYA51_04085	COG0745	RESPONSE REGULATOR receiver
FYA51_04090	COG0642	Histidine kinase
FYA51_04095	COG1368	sulfuric ester hydrolase activity
FYA51_04105	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FYA51_04160	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FYA51_04165	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FYA51_04170	COG0193	aminoacyl-tRNA hydrolase activity
FYA51_04180	COG0012	GTP binding
FYA51_04195	COG0745	RESPONSE REGULATOR receiver
FYA51_04200	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_04205	COG1309	transcriptional regulator
FYA51_04215	COG2814	Major facilitator Superfamily
FYA51_04240	COG0281	malic enzyme
FYA51_04240	COG0280	phosphate acetyltransferase
FYA51_04250	COG0601	transmembrane transport
FYA51_04255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_04260	COG4172	Belongs to the ABC transporter superfamily
FYA51_04275	COG0583	DNA-binding transcription factor activity
FYA51_04290	COG0640	Transcriptional regulator
FYA51_04305	COG3135	benzoate transporter
FYA51_04310	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA51_04315	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FYA51_04320	COG0742	ribosomal rna small subunit methyltransferase
FYA51_04335	COG3639	organic phosphonate transmembrane transporter activity
FYA51_04340	COG3639	organic phosphonate transmembrane transporter activity
FYA51_04370	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FYA51_04375	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYA51_04385	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FYA51_04390	COG1546	Belongs to the CinA family
FYA51_04390	COG1058	Belongs to the CinA family
FYA51_04395	COG0284	orotidine-5'-phosphate decarboxylase activity
FYA51_04400	COG1252	NADH dehydrogenase
FYA51_04420	COG0459	protein refolding
FYA51_04425	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FYA51_04445	COG1053	succinate dehydrogenase
FYA51_04455	COG0583	DNA-binding transcription factor activity
FYA51_04465	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_04470	COG1414	Transcriptional regulator
FYA51_04485	COG1335	isochorismatase
FYA51_04500	COG0405	Gamma-glutamyltransferase
FYA51_04515	COG1960	acyl-CoA dehydrogenase activity
FYA51_04520	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_04525	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_04530	COG0583	DNA-binding transcription factor activity
FYA51_04555	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_04560	COG0583	DNA-binding transcription factor activity
FYA51_04565	COG5001	Diguanylate cyclase
FYA51_04620	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA51_04620	COG1024	Enoyl-CoA hydratase
FYA51_04625	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_04640	COG1024	Enoyl-CoA hydratase
FYA51_04645	COG1024	Enoyl-CoA hydratase
FYA51_04650	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_04655	COG1960	acyl-CoA dehydrogenase activity
FYA51_04695	COG3685	Protein conserved in bacteria
FYA51_04705	COG0387	Pfam Sodium calcium exchanger
FYA51_04710	COG3795	YCII-related domain
FYA51_04735	COG0154	amidase activity
FYA51_04740	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_04745	COG1024	Enoyl-CoA hydratase
FYA51_04755	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_04770	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_04775	COG1414	Transcriptional regulator
FYA51_04790	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA51_04795	COG0251	oxidation-reduction process
FYA51_04800	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_04815	COG0410	ABC transporter
FYA51_04820	COG1902	pentaerythritol trinitrate reductase activity
FYA51_04825	COG0583	DNA-binding transcription factor activity
FYA51_04835	COG0590	tRNA wobble adenosine to inosine editing
FYA51_04840	COG2807	transmembrane transport
FYA51_04845	COG0307	riboflavin synthase, alpha
FYA51_04850	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_04855	COG1522	sequence-specific DNA binding
FYA51_04865	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_04875	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_04915	COG1418	mRNA catabolic process
FYA51_04925	COG1335	isochorismatase
FYA51_04950	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA51_04955	COG2274	protein secretion by the type I secretion system
FYA51_04965	COG1538	Outer membrane efflux protein
FYA51_04980	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FYA51_04990	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_05000	COG1309	transcriptional regulator
FYA51_05005	COG1960	acyl-CoA dehydrogenase activity
FYA51_05010	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_05015	COG2076	Multidrug Resistance protein
FYA51_05020	COG1309	transcriptional regulator
FYA51_05040	COG0840	transmembrane signaling receptor activity
FYA51_05055	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA51_05080	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_05090	COG1024	Enoyl-CoA hydratase
FYA51_05100	COG2203	Gaf domain
FYA51_05100	COG2199	diguanylate cyclase activity
FYA51_05120	COG0154	amidase activity
FYA51_05150	COG3945	hemerythrin HHE cation binding domain
FYA51_05165	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA51_05165	COG2169	Transcriptional regulator
FYA51_05185	COG1271	oxidase subunit
FYA51_05190	COG1294	oxidase, subunit
FYA51_05200	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA51_05235	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYA51_05260	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FYA51_05270	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FYA51_05275	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FYA51_05285	COG2070	2-Nitropropane dioxygenase
FYA51_05300	COG1917	Cupin 2, conserved barrel domain protein
FYA51_05300	COG2207	Transcriptional regulator
FYA51_05320	COG2900	Belongs to the SlyX family
FYA51_05330	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA51_05360	COG0583	DNA-binding transcription factor activity
FYA51_05375	COG0583	DNA-binding transcription factor activity
FYA51_05400	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FYA51_05410	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA51_05415	COG1845	cytochrome c oxidase, subunit III
FYA51_05420	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FYA51_05425	COG0640	Transcriptional regulator
FYA51_05515	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_05525	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FYA51_05530	COG1845	cytochrome c oxidase, subunit III
FYA51_05535	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA51_05540	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FYA51_05545	COG0477	Major facilitator Superfamily
FYA51_05560	COG5006	permease, DMT superfamily
FYA51_05580	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FYA51_05595	COG3383	formate dehydrogenase (NAD+) activity
FYA51_05615	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FYA51_05620	COG0303	'Molybdopterin
FYA51_05625	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA51_05635	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FYA51_05650	COG0412	Dienelactone hydrolase
FYA51_05660	COG0678	peroxiredoxin activity
FYA51_05670	COG0697	spore germination
FYA51_05675	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FYA51_05715	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA51_05720	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FYA51_05725	COG1335	isochorismatase
FYA51_05730	COG0523	cobalamin synthesis protein
FYA51_05735	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_05740	COG1053	succinate dehydrogenase
FYA51_05750	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_05760	COG1802	Transcriptional regulator
FYA51_05780	COG0667	Aldo Keto reductase
FYA51_05790	COG4535	Mg2 and Co2 transporter CorC
FYA51_05800	COG1702	phosphate starvation-inducible protein PhoH
FYA51_05815	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA51_05820	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA51_05825	COG1862	Preprotein translocase
FYA51_05830	COG0343	queuine tRNA-ribosyltransferase activity
FYA51_05840	COG2027	D-alanyl-D-alanine carboxypeptidase
FYA51_05845	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FYA51_05855	COG1648	precorrin-2 dehydrogenase activity
FYA51_05855	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FYA51_05885	COG0741	lytic transglycosylase activity
FYA51_05895	COG0436	Aminotransferase
FYA51_05905	COG0281	malic enzyme
FYA51_05905	COG0280	phosphate acetyltransferase
FYA51_05915	COG2732	(Barnase) inhibitor
FYA51_05920	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FYA51_05925	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYA51_05930	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FYA51_05940	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FYA51_05945	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYA51_05960	COG0625	glutathione transferase activity
FYA51_05990	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FYA51_06000	COG0306	phosphate transporter
FYA51_06005	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA51_06015	COG0739	heme binding
FYA51_06025	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FYA51_06075	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FYA51_06100	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FYA51_06105	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FYA51_06110	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FYA51_06115	COG0009	L-threonylcarbamoyladenylate synthase
FYA51_06120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA51_06125	COG1414	Transcriptional regulator
FYA51_06140	COG0765	amino acid transport
FYA51_06145	COG1126	abc transporter atp-binding protein
FYA51_06165	COG0028	Belongs to the TPP enzyme family
FYA51_06170	COG0583	DNA-binding transcription factor activity
FYA51_06175	COG4974	Belongs to the 'phage' integrase family
FYA51_06180	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FYA51_06185	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
FYA51_06195	COG1686	Belongs to the peptidase S11 family
FYA51_06215	COG1074	ATP-dependent DNA helicase activity
FYA51_06225	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FYA51_06235	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FYA51_06240	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_06245	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYA51_06255	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_06260	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYA51_06265	COG0505	Belongs to the CarA family
FYA51_06270	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FYA51_06305	COG0613	PHP domain protein
FYA51_06325	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA51_06330	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FYA51_06330	COG0047	phosphoribosylformylglycinamidine synthase activity
FYA51_06335	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FYA51_06335	COG3210	domain, Protein
FYA51_06335	COG3064	Membrane
FYA51_06355	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_06375	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA51_06395	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FYA51_06400	COG2197	response regulator
FYA51_06440	COG1061	Type III restriction enzyme res subunit
FYA51_06445	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FYA51_06465	COG0477	Major facilitator Superfamily
FYA51_06470	COG2814	Major facilitator Superfamily
FYA51_06475	COG1733	regulation of RNA biosynthetic process
FYA51_06485	COG0625	glutathione transferase activity
FYA51_06500	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FYA51_06515	COG3618	amidohydrolase
FYA51_06530	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_06550	COG2079	MmgE PrpD family protein
FYA51_06555	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_06590	COG1280	lysine exporter protein (LysE YggA)
FYA51_06605	COG0747	negative chemotaxis
FYA51_06610	COG0601	transmembrane transport
FYA51_06620	COG4172	Belongs to the ABC transporter superfamily
FYA51_06625	COG1609	Transcriptional regulator
FYA51_06640	COG0789	Transcriptional regulator
FYA51_06665	COG2188	Transcriptional regulator
FYA51_06670	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_06690	COG1802	Transcriptional regulator
FYA51_06710	COG0842	Transport permease protein
FYA51_06735	COG0656	L-ascorbic acid biosynthetic process
FYA51_06740	COG3284	Transcriptional regulator
FYA51_06745	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_06760	COG2733	membrane
FYA51_06765	COG0583	DNA-binding transcription factor activity
FYA51_06770	COG0384	phenazine biosynthesis protein PhzF
FYA51_06775	COG5507	3-demethylubiquinone-9 3-methyltransferase
FYA51_06810	COG0659	secondary active sulfate transmembrane transporter activity
FYA51_06835	COG1132	(ABC) transporter
FYA51_06875	COG2207	Transcriptional regulator
FYA51_06910	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA51_06915	COG1280	lysine exporter protein (LysE YggA)
FYA51_06935	COG0625	glutathione transferase activity
FYA51_06950	COG0697	spore germination
FYA51_06985	COG3246	L-lysine catabolic process to acetate
FYA51_06990	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA51_06995	COG0583	DNA-binding transcription factor activity
FYA51_07010	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA51_07015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA51_07020	COG3622	Belongs to the hyi family
FYA51_07030	COG0129	dihydroxy-acid dehydratase activity
FYA51_07045	COG0129	dihydroxy-acid dehydratase activity
FYA51_07050	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_07060	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYA51_07075	COG2188	Transcriptional regulator
FYA51_07085	COG0583	DNA-binding transcription factor activity
FYA51_07095	COG0501	Belongs to the peptidase M48B family
FYA51_07105	COG2814	Major facilitator Superfamily
FYA51_07110	COG0583	DNA-binding transcription factor activity
FYA51_07145	COG4691	Plasmid stability protein
FYA51_07175	COG2837	iron assimilation
FYA51_07200	COG1335	isochorismatase
FYA51_07260	COG2346	COG2346, Truncated hemoglobins
FYA51_07270	COG1126	abc transporter atp-binding protein
FYA51_07280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA51_07290	COG0789	Transcriptional regulator
FYA51_07300	COG0165	Argininosuccinate lyase
FYA51_07305	COG0668	transmembrane transport
FYA51_07355	COG0747	negative chemotaxis
FYA51_07360	COG0601	transmembrane transport
FYA51_07375	COG1280	lysine exporter protein (LysE YggA)
FYA51_07380	COG4681	YaeQ
FYA51_07395	COG3161	chorismate lyase activity
FYA51_07400	COG1187	pseudouridine synthase activity
FYA51_07410	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA51_07420	COG1538	Outer membrane efflux protein
FYA51_07430	COG1999	signal sequence binding
FYA51_07435	COG0339	signal peptide processing
FYA51_07445	COG4566	intracellular signal transduction
FYA51_07455	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FYA51_07460	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA51_07465	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA51_07470	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FYA51_07505	COG2198	Histidine kinase
FYA51_07505	COG0643	Histidine kinase
FYA51_07510	COG0835	chemotaxis
FYA51_07515	COG0840	transmembrane signaling receptor activity
FYA51_07520	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FYA51_07530	COG0745	RESPONSE REGULATOR receiver
FYA51_07535	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FYA51_07570	COG1815	bacterial-type flagellum-dependent cell motility
FYA51_07575	COG1558	bacterial-type flagellum-dependent cell motility
FYA51_07580	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FYA51_07585	COG1749	Flagellar hook protein flgE
FYA51_07605	COG1706	bacterial-type flagellum-dependent cell motility
FYA51_07615	COG1256	bacterial-type flagellum assembly
FYA51_07625	COG0840	transmembrane signaling receptor activity
FYA51_07645	COG1338	Plays a role in the flagellum-specific transport system
FYA51_07665	COG1580	Controls the rotational direction of flagella during chemotaxis
FYA51_07680	COG1157	protein secretion by the type III secretion system
FYA51_07685	COG1317	bacterial-type flagellum organization
FYA51_07690	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA51_07700	COG1677	Flagellar hook-basal body complex protein FliE
FYA51_07710	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYA51_07740	COG0285	dihydrofolate synthase activity
FYA51_07775	COG0024	Methionine aminopeptidase
FYA51_07780	COG0052	Belongs to the universal ribosomal protein uS2 family
FYA51_07795	COG0233	cytoplasmic translational termination
FYA51_07800	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FYA51_07815	COG0750	zinc metalloprotease
FYA51_07820	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA51_07825	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FYA51_07845	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYA51_07850	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FYA51_07855	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA51_07860	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FYA51_07880	COG0330	HflC and HflK could
FYA51_07895	COG2867	negative regulation of translational initiation
FYA51_07905	COG1960	acyl-CoA dehydrogenase activity
FYA51_07910	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FYA51_07935	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FYA51_07940	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYA51_07945	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FYA51_07950	COG0084	hydrolase, TatD family'
FYA51_07975	COG1126	abc transporter atp-binding protein
FYA51_07985	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FYA51_07990	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_08000	COG0028	Belongs to the TPP enzyme family
FYA51_08030	COG3189	MarR family transcriptional regulator
FYA51_08060	COG1595	DNA-templated transcription, initiation
FYA51_08070	COG0861	Integral membrane protein TerC family
FYA51_08095	COG2988	succinylglutamate desuccinylase activity
FYA51_08110	COG1253	flavin adenine dinucleotide binding
FYA51_08120	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_08125	COG2084	Dehydrogenase
FYA51_08160	COG2814	Major facilitator Superfamily
FYA51_08170	COG0583	DNA-binding transcription factor activity
FYA51_08200	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYA51_08205	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYA51_08210	COG0840	transmembrane signaling receptor activity
FYA51_08215	COG5002	protein histidine kinase activity
FYA51_08215	COG3447	MASE1 domain protein
FYA51_08215	COG5001	Diguanylate cyclase
FYA51_08235	COG3468	outer membrane autotransporter barrel domain protein
FYA51_08240	COG3468	outer membrane autotransporter barrel domain protein
FYA51_08275	COG5265	(ABC) transporter
FYA51_08285	COG0667	Aldo Keto reductase
FYA51_08300	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA51_08335	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA51_08335	COG1017	nitric oxide dioxygenase activity
FYA51_08340	COG1959	2 iron, 2 sulfur cluster binding
FYA51_08365	COG0400	carboxylic ester hydrolase activity
FYA51_08375	COG1566	PFAM secretion protein HlyD family protein
FYA51_08400	COG0235	Class ii aldolase
FYA51_08405	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA51_08410	COG0720	synthase
FYA51_08415	COG0602	queuosine metabolic process
FYA51_08435	COG4208	sulfate ABC transporter
FYA51_08445	COG0175	sulfate reduction
FYA51_08475	COG0335	large ribosomal subunit rRNA binding
FYA51_08485	COG0667	Aldo Keto reductase
FYA51_08490	COG1162	GTPase activity
FYA51_08495	COG0501	Belongs to the peptidase M48B family
FYA51_08500	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FYA51_08515	COG3396	Phenylacetate-CoA oxygenase
FYA51_08520	COG3460	Phenylacetate-CoA oxygenase
FYA51_08525	COG3396	Phenylacetate-CoA oxygenase
FYA51_08530	COG2151	metal-sulfur cluster biosynthetic enzyme
FYA51_08535	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA51_08540	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_08545	COG1024	Enoyl-CoA hydratase
FYA51_08550	COG2050	protein possibly involved in aromatic compounds catabolism
FYA51_08565	COG3539	Fimbrial protein
FYA51_08570	COG3539	Fimbrial protein
FYA51_08585	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA51_08590	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FYA51_08600	COG3642	lipopolysaccharide core region biosynthetic process
FYA51_08605	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYA51_08610	COG3842	ATPase activity
FYA51_08615	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA51_08620	COG1177	transmembrane transport
FYA51_08630	COG2094	Belongs to the DNA glycosylase MPG family
FYA51_08645	COG1960	acyl-CoA dehydrogenase activity
FYA51_08655	COG0704	Plays a role in the regulation of phosphate uptake
FYA51_08665	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FYA51_08670	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYA51_08670	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FYA51_08675	COG1643	Atp-dependent helicase
FYA51_08690	COG0438	transferase activity, transferring glycosyl groups
FYA51_08695	COG0726	polysaccharide deacetylase
FYA51_08700	COG0463	Glycosyl transferase, family 2
FYA51_08705	COG0438	transferase activity, transferring glycosyl groups
FYA51_08710	COG2194	sulfuric ester hydrolase activity
FYA51_08735	COG0859	PFAM glycosyl transferase family 9
FYA51_08740	COG1132	(ABC) transporter
FYA51_08755	COG0077	Prephenate dehydratase
FYA51_08760	COG1530	ribonuclease E activity
FYA51_08800	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA51_08805	COG0154	amidase activity
FYA51_08835	COG2814	Major facilitator Superfamily
FYA51_08840	COG1846	Transcriptional regulator
FYA51_08855	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FYA51_08860	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FYA51_08865	COG2814	Major facilitator Superfamily
FYA51_08870	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYA51_08880	COG4176	ABC-type proline glycine betaine transport system permease component
FYA51_08890	COG1942	4-Oxalocrotonate Tautomerase
FYA51_08895	COG0183	Belongs to the thiolase family
FYA51_08905	COG1802	Transcriptional regulator
FYA51_08915	COG1024	Enoyl-CoA hydratase
FYA51_08920	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_08930	COG2032	superoxide dismutase activity
FYA51_08945	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FYA51_08970	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA51_08980	COG1538	Outer membrane efflux protein
FYA51_08985	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FYA51_08990	COG0736	holo-[acyl-carrier-protein] synthase activity
FYA51_08995	COG1472	Belongs to the glycosyl hydrolase 3 family
FYA51_09000	COG0322	excinuclease ABC activity
FYA51_09005	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FYA51_09020	COG2224	Isocitrate lyase
FYA51_09030	COG1346	cytolysis
FYA51_09035	COG1380	Effector of murein hydrolase LrgA
FYA51_09040	COG4106	trans-aconitate 2-methyltransferase activity
FYA51_09040	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FYA51_09070	COG3278	Belongs to the heme-copper respiratory oxidase family
FYA51_09115	COG1131	(ABC) transporter
FYA51_09120	COG0842	Transport permease protein
FYA51_09125	COG0628	permease
FYA51_09140	COG2814	Major facilitator Superfamily
FYA51_09145	COG2841	Protein conserved in bacteria
FYA51_09170	COG0765	amino acid transport
FYA51_09175	COG0765	amino acid transport
FYA51_09180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA51_09215	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA51_09220	COG1595	DNA-templated transcription, initiation
FYA51_09230	COG3530	Putative quorum-sensing-regulated virulence factor
FYA51_09235	COG0494	nUDIX hydrolase
FYA51_09250	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA51_09260	COG3468	outer membrane autotransporter barrel domain protein
FYA51_09275	COG5564	TIM-barrel signal transduction protein
FYA51_09290	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FYA51_09325	COG1131	(ABC) transporter
FYA51_09345	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
FYA51_09345	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
FYA51_09350	COG1562	ergosterol biosynthetic process
FYA51_09355	COG1562	ergosterol biosynthetic process
FYA51_09360	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYA51_09380	COG2304	oxidoreductase activity
FYA51_09420	COG0254	rRNA binding
FYA51_09440	COG1047	Peptidyl-prolyl cis-trans
FYA51_09450	COG0625	glutathione transferase activity
FYA51_09470	COG0523	cobalamin synthesis protein
FYA51_09480	COG0583	DNA-binding transcription factor activity
FYA51_09490	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FYA51_09495	COG1187	pseudouridine synthase activity
FYA51_09505	COG0195	Participates in both transcription termination and antitermination
FYA51_09505	COG2251	uridine kinase activity
FYA51_09540	COG1611	Belongs to the LOG family
FYA51_09555	COG0412	Dienelactone hydrolase
FYA51_09560	COG1283	sodium-dependent phosphate transmembrane transporter activity
FYA51_09565	COG1760	l-serine dehydratase
FYA51_09570	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FYA51_09585	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FYA51_09595	COG0187	DNA topoisomerase II activity
FYA51_09610	COG2311	Membrane
FYA51_09625	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA51_09645	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYA51_09650	COG0662	Cupin 2, conserved barrel domain protein
FYA51_09665	COG3395	kinase activity
FYA51_09670	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FYA51_09695	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
FYA51_09705	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA51_09745	COG4964	Belongs to the GSP D family
FYA51_09780	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYA51_09790	COG1295	ribonuclease BN
FYA51_09800	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FYA51_09805	COG0745	RESPONSE REGULATOR receiver
FYA51_09810	COG2205	protein histidine kinase activity
FYA51_09815	COG5001	Diguanylate cyclase
FYA51_09825	COG4783	chaperone-mediated protein folding
FYA51_09830	COG1763	Mo-molybdopterin cofactor biosynthetic process
FYA51_09835	COG0303	'Molybdopterin
FYA51_09840	COG0746	molybdenum cofactor guanylyltransferase activity
FYA51_09845	COG0489	protein tyrosine kinase activity
FYA51_09875	COG3383	formate dehydrogenase (NAD+) activity
FYA51_09875	COG0243	molybdopterin cofactor binding
FYA51_09880	COG0437	4 iron, 4 sulfur cluster binding
FYA51_09910	COG1122	ATPase activity
FYA51_09920	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FYA51_09925	COG0066	3-isopropylmalate dehydratase activity
FYA51_09930	COG0473	3-isopropylmalate dehydrogenase activity
FYA51_09935	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FYA51_09945	COG0101	tRNA pseudouridine synthase activity
FYA51_09950	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA51_10000	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FYA51_10010	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA51_10020	COG2197	response regulator
FYA51_10025	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FYA51_10030	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FYA51_10035	COG0189	ligase activity
FYA51_10045	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA51_10050	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA51_10060	COG1764	response to oxidative stress
FYA51_10065	COG2423	ornithine cyclodeaminase activity
FYA51_10075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA51_10080	COG0765	amino acid transport
FYA51_10085	COG0765	amino acid transport
FYA51_10090	COG1126	abc transporter atp-binding protein
FYA51_10095	COG0756	dUTP diphosphatase activity
FYA51_10115	COG1522	sequence-specific DNA binding
FYA51_10125	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FYA51_10130	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FYA51_10140	COG0196	riboflavin kinase activity
FYA51_10145	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FYA51_10150	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYA51_10150	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FYA51_10165	COG0210	DNA helicase
FYA51_10170	COG4771	TonB-dependent receptor
FYA51_10175	COG0488	(ABC) transporter
FYA51_10180	COG2890	protein-(glutamine-N5) methyltransferase activity
FYA51_10195	COG0436	Aminotransferase
FYA51_10225	COG1278	Cold shock
FYA51_10235	COG1278	Cold shock
FYA51_10250	COG0740	serine-type endopeptidase activity
FYA51_10255	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FYA51_10260	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYA51_10265	COG0583	DNA-binding transcription factor activity
FYA51_10270	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_10285	COG1024	Enoyl-CoA hydratase
FYA51_10300	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_10305	COG1960	acyl-CoA dehydrogenase activity
FYA51_10320	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FYA51_10330	COG3468	outer membrane autotransporter barrel domain protein
FYA51_10350	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYA51_10360	COG1104	cysteine desulfurase activity
FYA51_10365	COG0822	iron-sulfur transferase activity
FYA51_10370	COG0316	Belongs to the HesB IscA family
FYA51_10385	COG0633	Ferredoxin
FYA51_10400	COG1024	Enoyl-CoA hydratase
FYA51_10430	COG1022	Amp-dependent synthetase and ligase
FYA51_10450	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_10460	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FYA51_10475	COG1136	(ABC) transporter
FYA51_10480	COG0084	hydrolase, TatD family'
FYA51_10495	COG4221	oxidoreductase activity
FYA51_10500	COG0406	alpha-ribazole phosphatase activity
FYA51_10510	COG3842	ATPase activity
FYA51_10525	COG2233	PERMEase
FYA51_10530	COG0840	transmembrane signaling receptor activity
FYA51_10535	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA51_10545	COG1534	Rna-binding protein
FYA51_10550	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FYA51_10555	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYA51_10565	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FYA51_10575	COG0248	Ppx GppA phosphatase
FYA51_10600	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FYA51_10675	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_10705	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_10740	COG2072	flavoprotein involved in K transport
FYA51_10745	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA51_10775	COG1137	ATPase activity
FYA51_10785	COG0154	amidase activity
FYA51_10790	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA51_10810	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA51_10815	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA51_10820	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA51_10830	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA51_10840	COG1522	sequence-specific DNA binding
FYA51_10845	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA51_10850	COG1473	amidohydrolase
FYA51_10855	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA51_10860	COG4597	amino acid ABC transporter
FYA51_10865	COG0765	amino acid transport
FYA51_10870	COG1126	abc transporter atp-binding protein
FYA51_10885	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA51_10915	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_10935	COG0583	DNA-binding transcription factor activity
FYA51_10970	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA51_10990	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_11010	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FYA51_11020	COG1132	(ABC) transporter
FYA51_11025	COG0500	methyltransferase
FYA51_11045	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FYA51_11055	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_11065	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FYA51_11075	COG0511	ligase activity, forming carbon-carbon bonds
FYA51_11100	COG2188	Transcriptional regulator
FYA51_11105	COG0439	Biotin carboxylase
FYA51_11115	COG0511	ligase activity, forming carbon-carbon bonds
FYA51_11130	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA51_11160	COG3971	2-oxopent-4-enoate hydratase activity
FYA51_11165	COG0583	DNA-binding transcription factor activity
FYA51_11180	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA51_11210	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_11220	COG0411	ABC transporter
FYA51_11230	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_11270	COG0251	oxidation-reduction process
FYA51_11370	COG4669	(LipO)protein
FYA51_11400	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA51_11405	COG4790	Type iii secretion
FYA51_11410	COG4794	Type iii secretion
FYA51_11415	COG4791	protein targeting
FYA51_11420	COG4792	protein secretion
FYA51_11455	COG2208	phosphoserine phosphatase activity
FYA51_11455	COG2770	Histidine kinase
FYA51_11465	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYA51_11475	COG1366	Belongs to the anti-sigma-factor antagonist family
FYA51_11480	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA51_11520	COG2321	neutral zinc metallopeptidase
FYA51_11525	COG0009	L-threonylcarbamoyladenylate synthase
FYA51_11530	COG1994	Peptidase M50
FYA51_11535	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA51_11540	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FYA51_11545	COG3539	Fimbrial protein
FYA51_11555	COG2850	peptidyl-arginine hydroxylation
FYA51_11565	COG3360	Dodecin
FYA51_11600	COG0668	transmembrane transport
FYA51_11625	COG1253	flavin adenine dinucleotide binding
FYA51_11630	COG1968	undecaprenyl-diphosphatase activity
FYA51_11635	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYA51_11645	COG3063	Type IV pilus biogenesis stability protein PilW
FYA51_11650	COG0215	cysteine-tRNA ligase activity
FYA51_11660	COG0825	malonyl-CoA metabolic process
FYA51_11670	COG0527	aspartate kinase activity
FYA51_11695	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA51_11710	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYA51_11720	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_11730	COG0583	DNA-binding transcription factor activity
FYA51_11745	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA51_11755	COG3842	ATPase activity
FYA51_11765	COG1902	pentaerythritol trinitrate reductase activity
FYA51_11765	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYA51_11770	COG1414	Transcriptional regulator
FYA51_11775	COG1832	CoA-binding protein
FYA51_11785	COG0251	oxidation-reduction process
FYA51_11810	COG1902	pentaerythritol trinitrate reductase activity
FYA51_11820	COG1215	transferase activity, transferring glycosyl groups
FYA51_11825	COG0726	polysaccharide deacetylase
FYA51_11825	COG1649	PFAM Uncharacterised BCR, COG1649
FYA51_11845	COG1846	Transcriptional regulator
FYA51_11875	COG2080	2 iron, 2 sulfur cluster binding
FYA51_11890	COG0596	Alpha beta hydrolase
FYA51_11895	COG2309	aminopeptidase activity
FYA51_11900	COG1335	isochorismatase
FYA51_11905	COG2010	Cytochrome c
FYA51_11905	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYA51_11910	COG1017	nitric oxide dioxygenase activity
FYA51_11910	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA51_11925	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_11935	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_11945	COG0183	Belongs to the thiolase family
FYA51_11950	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA51_11950	COG1024	Enoyl-CoA hydratase
FYA51_11965	COG0183	Belongs to the thiolase family
FYA51_11980	COG2197	response regulator
FYA51_11995	COG0166	Belongs to the GPI family
FYA51_12000	COG1045	serine acetyltransferase
FYA51_12025	COG0483	inositol monophosphate 1-phosphatase activity
FYA51_12035	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYA51_12055	COG0598	Magnesium transport protein CorA
FYA51_12065	COG0747	negative chemotaxis
FYA51_12070	COG0601	transmembrane transport
FYA51_12075	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_12080	COG4172	Belongs to the ABC transporter superfamily
FYA51_12130	COG4964	Belongs to the GSP D family
FYA51_12195	COG3474	cytochrome
FYA51_12200	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FYA51_12215	COG3384	dioxygenase
FYA51_12220	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA51_12240	COG2885	chlorophyll binding
FYA51_12275	COG0697	spore germination
FYA51_12280	COG0730	response to heat
FYA51_12295	COG3264	Mechanosensitive ion channel
FYA51_12295	COG1511	domain protein
FYA51_12300	COG0583	DNA-binding transcription factor activity
FYA51_12305	COG0427	acetyl-CoA hydrolase
FYA51_12310	COG0385	Bile acid
FYA51_12350	COG3468	outer membrane autotransporter barrel domain protein
FYA51_12355	COG0424	maF-like protein
FYA51_12365	COG0799	negative regulation of ribosome biogenesis
FYA51_12375	COG0408	coproporphyrinogen oxidase activity
FYA51_12380	COG0151	Belongs to the GarS family
FYA51_12385	COG0217	transcriptional regulatory protein
FYA51_12390	COG0433	COG0433 Predicted ATPase
FYA51_12395	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA51_12405	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_12430	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYA51_12440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_12450	COG0747	negative chemotaxis
FYA51_12460	COG0473	3-isopropylmalate dehydrogenase activity
FYA51_12480	COG1846	Transcriptional regulator
FYA51_12490	COG0697	spore germination
FYA51_12500	COG0501	Belongs to the peptidase M48B family
FYA51_12520	COG0583	DNA-binding transcription factor activity
FYA51_12525	COG3842	ATPase activity
FYA51_12530	COG1178	ABC-type Fe3 transport system permease component
FYA51_12535	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA51_12540	COG1840	ABC-type Fe3 transport system, periplasmic component
FYA51_12575	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_12585	COG1722	exodeoxyribonuclease VII activity
FYA51_12590	COG0142	geranyltranstransferase activity
FYA51_12595	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FYA51_12600	COG1469	GTP cyclohydrolase I activity
FYA51_12605	COG0360	Binds together with S18 to 16S ribosomal RNA
FYA51_12610	COG2965	DNA replication, synthesis of RNA primer
FYA51_12615	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FYA51_12620	COG0359	binds to the 23S rRNA
FYA51_12635	COG0305	Participates in initiation and elongation during chromosome replication
FYA51_12645	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FYA51_12650	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FYA51_12655	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FYA51_12660	COG3737	Protein of unknown function (DUF498/DUF598)
FYA51_12665	COG0436	Aminotransferase
FYA51_12685	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FYA51_12690	COG0308	aminopeptidase N
FYA51_12705	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA51_12710	COG0312	modulator of DNA gyrase
FYA51_12715	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA51_12720	COG3064	Membrane
FYA51_12720	COG3210	domain, Protein
FYA51_12720	COG3064	Membrane
FYA51_12720	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FYA51_12720	COG3210	domain, Protein
FYA51_12720	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FYA51_12725	COG0277	FAD linked oxidase domain protein
FYA51_12730	COG0277	FAD linked oxidase domain protein
FYA51_12740	COG0247	lactate metabolic process
FYA51_12745	COG2819	hydrolase of the alpha beta superfamily
FYA51_12760	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FYA51_12765	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FYA51_12770	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FYA51_12785	COG0583	DNA-binding transcription factor activity
FYA51_12795	COG0730	response to heat
FYA51_12800	COG0625	glutathione transferase activity
FYA51_12805	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FYA51_12810	COG3909	cytochrome
FYA51_12845	COG3706	GGDEF domain
FYA51_12885	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
FYA51_12895	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA51_12900	COG0069	glutamate synthase activity
FYA51_12905	COG2391	methyltransferase activity
FYA51_12910	COG0679	Auxin Efflux Carrier
FYA51_12915	COG2153	protein acetylation
FYA51_12935	COG0557	exoribonuclease II activity
FYA51_12940	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA51_12950	COG3128	pkhd-type hydroxylase
FYA51_12955	COG0776	regulation of translation
FYA51_12980	COG0745	RESPONSE REGULATOR receiver
FYA51_12985	COG0642	Histidine kinase
FYA51_12990	COG3158	transport of potassium into the cell
FYA51_12995	COG0137	argininosuccinate synthase activity
FYA51_13000	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYA51_13015	COG0583	DNA-binding transcription factor activity
FYA51_13025	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYA51_13045	COG2186	Transcriptional regulator
FYA51_13050	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA51_13070	COG0268	Binds directly to 16S ribosomal RNA
FYA51_13080	COG0728	peptidoglycan biosynthetic process
FYA51_13100	COG2835	tetraacyldisaccharide 4'-kinase activity
FYA51_13105	COG1663	tetraacyldisaccharide 4'-kinase activity
FYA51_13110	COG0848	biopolymer transport protein
FYA51_13115	COG0811	peptide transport
FYA51_13120	COG1570	exodeoxyribonuclease VII activity
FYA51_13125	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA51_13130	COG0038	chloride channel
FYA51_13135	COG0183	Belongs to the thiolase family
FYA51_13145	COG1278	Cold shock
FYA51_13150	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FYA51_13160	COG4953	penicillin-binding protein 1C
FYA51_13165	COG0542	response to heat
FYA51_13170	COG2995	paraquat-inducible protein a
FYA51_13175	COG3008	intermembrane lipid transfer
FYA51_13175	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYA51_13185	COG0506	proline dehydrogenase activity
FYA51_13185	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA51_13185	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA51_13195	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_13220	COG1309	transcriptional regulator
FYA51_13235	COG0004	ammonium transporteR
FYA51_13260	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FYA51_13265	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FYA51_13280	COG0776	regulation of translation
FYA51_13305	COG0500	methyltransferase
FYA51_13320	COG2367	Beta-lactamase
FYA51_13330	COG1522	sequence-specific DNA binding
FYA51_13345	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA51_13380	COG0540	Belongs to the ATCase OTCase family
FYA51_13395	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_13400	COG0583	DNA-binding transcription factor activity
FYA51_13405	COG0183	Belongs to the thiolase family
FYA51_13420	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_13435	COG3842	ATPase activity
FYA51_13440	COG1024	Enoyl-CoA hydratase
FYA51_13440	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA51_13450	COG0642	Histidine kinase
FYA51_13460	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FYA51_13465	COG2137	regulation of response to DNA damage stimulus
FYA51_13470	COG0583	DNA-binding transcription factor activity
FYA51_13475	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FYA51_13485	COG0045	succinate-CoA ligase (ADP-forming) activity
FYA51_13490	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA51_13495	COG0861	Integral membrane protein TerC family
FYA51_13500	COG0861	Integral membrane protein TerC family
FYA51_13505	COG0181	hydroxymethylbilane synthase activity
FYA51_13525	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FYA51_13545	COG2204	response regulator
FYA51_13550	COG2204	response regulator
FYA51_13555	COG0028	Belongs to the TPP enzyme family
FYA51_13610	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_13620	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FYA51_13625	COG4575	ribosome binding
FYA51_13645	COG1546	Belongs to the CinA family
FYA51_13645	COG1058	Belongs to the CinA family
FYA51_13660	COG0392	lysyltransferase activity
FYA51_13670	COG3568	Endonuclease Exonuclease Phosphatase
FYA51_13680	COG1695	Transcriptional regulator
FYA51_13700	COG0583	DNA-binding transcription factor activity
FYA51_13730	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_13735	COG4948	Mandelate Racemase Muconate Lactonizing
FYA51_13765	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA51_13800	COG3005	denitrification pathway
FYA51_13805	COG3043	anaerobic respiration
FYA51_13825	COG0330	HflC and HflK could
FYA51_13850	COG0583	DNA-binding transcription factor activity
FYA51_13855	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_13885	COG0431	NADPH-dependent FMN reductase
FYA51_13910	COG0824	Thioesterase
FYA51_13915	COG1454	alcohol dehydrogenase
FYA51_13925	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA51_13925	COG1024	Enoyl-CoA hydratase
FYA51_13930	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_13940	COG1024	Enoyl-CoA hydratase
FYA51_13950	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_13955	COG0583	DNA-binding transcription factor activity
FYA51_13960	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_13975	COG0183	Belongs to the thiolase family
FYA51_13980	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_13995	COG3119	arylsulfatase activity
FYA51_14010	COG0625	glutathione transferase activity
FYA51_14015	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
FYA51_14020	COG2944	sequence-specific DNA binding
FYA51_14030	COG2197	response regulator
FYA51_14050	COG3119	arylsulfatase activity
FYA51_14090	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FYA51_14105	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_14110	COG0861	Integral membrane protein TerC family
FYA51_14135	COG2267	carboxylic ester hydrolase activity
FYA51_14140	COG1228	amidohydrolase
FYA51_14150	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA51_14160	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA51_14180	COG0583	DNA-binding transcription factor activity
FYA51_14185	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_14210	COG2188	Transcriptional regulator
FYA51_14220	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_14225	COG1414	Transcriptional regulator
FYA51_14240	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA51_14245	COG0395	ABC-type sugar transport system, permease component
FYA51_14260	COG0439	Biotin carboxylase
FYA51_14265	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FYA51_14270	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_14290	COG0833	amino acid
FYA51_14320	COG3829	transcription factor binding
FYA51_14330	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYA51_14350	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_14355	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_14375	COG0583	DNA-binding transcription factor activity
FYA51_14380	COG4692	amylo-alpha-1,6-glucosidase activity
FYA51_14390	COG0183	Belongs to the thiolase family
FYA51_14405	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_14410	COG0633	Ferredoxin
FYA51_14420	COG1024	Enoyl-CoA hydratase
FYA51_14425	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FYA51_14430	COG4638	Rieske (2fe-2S)
FYA51_14435	COG0683	leucine binding
FYA51_14440	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_14500	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA51_14510	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FYA51_14525	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FYA51_14530	COG0330	HflC and HflK could
FYA51_14535	COG0330	HflC and HflK could
FYA51_14540	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FYA51_14545	COG1923	regulation of RNA biosynthetic process
FYA51_14555	COG1160	GTP binding
FYA51_14560	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA51_14565	COG2976	Protein conserved in bacteria
FYA51_14570	COG0124	histidyl-tRNA synthetase
FYA51_14575	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FYA51_14590	COG0105	UTP biosynthetic process
FYA51_14605	COG0745	RESPONSE REGULATOR receiver
FYA51_14610	COG0642	Histidine kinase
FYA51_14620	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FYA51_14625	COG0336	Belongs to the RNA methyltransferase TrmD family
FYA51_14630	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FYA51_14645	COG0425	Belongs to the sulfur carrier protein TusA family
FYA51_14700	COG4172	Belongs to the ABC transporter superfamily
FYA51_14705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_14710	COG0601	transmembrane transport
FYA51_14715	COG0747	negative chemotaxis
FYA51_14740	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FYA51_14790	COG1640	4-alpha-glucanotransferase
FYA51_14805	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FYA51_14835	COG0667	Aldo Keto reductase
FYA51_14850	COG2259	Doxx family
FYA51_14890	COG0386	Belongs to the glutathione peroxidase family
FYA51_14895	COG0625	glutathione transferase activity
FYA51_14910	COG0095	Lipoate-protein ligase
FYA51_14950	COG2363	Small membrane protein
FYA51_14975	COG2133	pyrroloquinoline quinone binding
FYA51_14980	COG0625	glutathione transferase activity
FYA51_14985	COG1794	racemase activity, acting on amino acids and derivatives
FYA51_14990	COG0410	ABC transporter
FYA51_14995	COG0411	ABC transporter
FYA51_15005	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_15015	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FYA51_15025	COG1653	transport
FYA51_15030	COG1175	transmembrane transport
FYA51_15035	COG0395	ABC-type sugar transport system, permease component
FYA51_15070	COG0300	oxidoreductase activity
FYA51_15090	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FYA51_15105	COG0438	transferase activity, transferring glycosyl groups
FYA51_15125	COG0463	Glycosyl transferase, family 2
FYA51_15140	COG0783	Belongs to the Dps family
FYA51_15155	COG0583	DNA-binding transcription factor activity
FYA51_15160	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FYA51_15175	COG0656	L-ascorbic acid biosynthetic process
FYA51_15180	COG2814	Major facilitator Superfamily
FYA51_15185	COG0583	DNA-binding transcription factor activity
FYA51_15195	COG1840	ABC-type Fe3 transport system, periplasmic component
FYA51_15205	COG3842	ATPase activity
FYA51_15210	COG1741	Belongs to the pirin family
FYA51_15215	COG1741	Belongs to the pirin family
FYA51_15220	COG0583	DNA-binding transcription factor activity
FYA51_15225	COG2204	response regulator
FYA51_15230	COG3852	Histidine kinase
FYA51_15240	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA51_15250	COG5001	Diguanylate cyclase
FYA51_15250	COG5002	protein histidine kinase activity
FYA51_15295	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYA51_15300	COG0791	NLP P60 protein
FYA51_15305	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_15310	COG2863	cytochrome
FYA51_15315	COG3258	Cytochrome c
FYA51_15320	COG0194	GDP metabolic process
FYA51_15325	COG1758	RNA polymerase activity
FYA51_15330	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYA51_15335	COG1126	abc transporter atp-binding protein
FYA51_15340	COG0765	amino acid transport
FYA51_15345	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA51_15365	COG0583	DNA-binding transcription factor activity
FYA51_15390	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA51_15405	COG2831	hemolysin activation secretion protein
FYA51_15410	COG3539	Fimbrial protein
FYA51_15415	COG3188	usher protein
FYA51_15420	COG3121	Chaperone
FYA51_15430	COG3064	Membrane
FYA51_15430	COG3210	domain, Protein
FYA51_15430	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FYA51_15435	COG2197	response regulator
FYA51_15450	COG4336	lyase activity
FYA51_15490	COG4181	ATPase activity
FYA51_15500	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA51_15505	COG0584	glycerophosphoryl diester phosphodiesterase
FYA51_15510	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FYA51_15520	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA51_15520	COG0678	peroxiredoxin activity
FYA51_15530	COG0789	Transcriptional regulator
FYA51_15560	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FYA51_15565	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FYA51_15570	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FYA51_15580	COG2252	PERMEase
FYA51_15585	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYA51_15590	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA51_15620	COG0488	(ABC) transporter
FYA51_15625	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA51_15635	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA51_15640	COG1024	Enoyl-CoA hydratase
FYA51_15645	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYA51_15650	COG0590	tRNA wobble adenosine to inosine editing
FYA51_15670	COG2212	antiporter activity
FYA51_15675	COG1863	multisubunit Na H antiporter MnhE subunit
FYA51_15680	COG0651	ATP synthesis coupled electron transport
FYA51_15685	COG1006	Multisubunit Na H antiporter MnhC subunit
FYA51_15690	COG2111	Na H antiporter
FYA51_15690	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FYA51_15705	COG0420	3'-5' exonuclease activity
FYA51_15740	COG0395	ABC-type sugar transport system, permease component
FYA51_15750	COG3842	ATPase activity
FYA51_15780	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_15785	COG1053	succinate dehydrogenase
FYA51_15785	COG3976	FMN-binding domain protein
FYA51_15815	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA51_15845	COG0450	alkyl hydroperoxide reductase
FYA51_15850	COG1960	acyl-CoA dehydrogenase activity
FYA51_15865	COG0123	including yeast histone deacetylase and acetoin utilization protein
FYA51_15870	COG2951	lytic endotransglycosylase activity
FYA51_15885	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA51_15890	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FYA51_15895	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FYA51_15925	COG0287	Prephenate dehydrogenase
FYA51_15935	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FYA51_15960	COG2814	Major facilitator Superfamily
FYA51_16030	COG0583	DNA-binding transcription factor activity
FYA51_16045	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA51_16070	COG1053	succinate dehydrogenase
FYA51_16075	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_16080	COG2079	MmgE PrpD family protein
FYA51_16090	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_16115	COG0028	Belongs to the TPP enzyme family
FYA51_16115	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
FYA51_16140	COG0778	Nitroreductase
FYA51_16145	COG2814	Major facilitator Superfamily
FYA51_16150	COG3706	GGDEF domain
FYA51_16155	COG0589	response to stress
FYA51_16165	COG2951	lytic endotransglycosylase activity
FYA51_16170	COG2833	Protein of unknown function (DUF455)
FYA51_16185	COG1132	(ABC) transporter
FYA51_16200	COG3237	CsbD-like
FYA51_16210	COG2823	Periplasmic or secreted lipoprotein
FYA51_16245	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
FYA51_16250	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_16255	COG3243	poly(R)-hydroxyalkanoic acid synthase
FYA51_16265	COG0564	pseudouridine synthase activity
FYA51_16275	COG1199	ATP-dependent helicase activity
FYA51_16280	COG2183	response to ionizing radiation
FYA51_16285	COG0180	Tryptophanyl-tRNA synthetase
FYA51_16305	COG4774	siderophore transport
FYA51_16315	COG1595	DNA-templated transcription, initiation
FYA51_16320	COG2175	clavaminate synthase activity
FYA51_16330	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_16335	COG0583	DNA-binding transcription factor activity
FYA51_16340	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_16345	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FYA51_16350	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA51_16355	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA51_16360	COG0567	Dehydrogenase, E1 component
FYA51_16370	COG1522	sequence-specific DNA binding
FYA51_16380	COG0280	phosphate acetyltransferase
FYA51_16380	COG0281	malic enzyme
FYA51_16385	COG3539	Fimbrial protein
FYA51_16400	COG0372	Belongs to the citrate synthase family
FYA51_16405	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FYA51_16410	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYA51_16415	COG1053	succinate dehydrogenase
FYA51_16420	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FYA51_16425	COG2009	succinate dehydrogenase
FYA51_16430	COG2188	Transcriptional regulator
FYA51_16435	COG0039	L-malate dehydrogenase activity
FYA51_16455	COG2828	Protein conserved in bacteria
FYA51_16490	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA51_16500	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FYA51_16535	COG0148	phosphopyruvate hydratase activity
FYA51_16550	COG0504	CTP synthase activity
FYA51_16570	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_16580	COG0747	negative chemotaxis
FYA51_16585	COG4172	Belongs to the ABC transporter superfamily
FYA51_16590	COG1446	asparaginase
FYA51_16620	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FYA51_16635	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FYA51_16640	COG0697	spore germination
FYA51_16645	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA51_16655	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FYA51_16660	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA51_16665	COG0791	NLP P60 protein
FYA51_16675	COG0583	DNA-binding transcription factor activity
FYA51_16690	COG0583	DNA-binding transcription factor activity
FYA51_16715	COG0670	Belongs to the BI1 family
FYA51_16720	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_16730	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FYA51_16740	COG1381	Involved in DNA repair and RecF pathway recombination
FYA51_16745	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FYA51_16750	COG0571	ribonuclease III activity
FYA51_16755	COG0681	Belongs to the peptidase S26 family
FYA51_16760	COG0481	GTPase activity
FYA51_16765	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA51_16790	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYA51_16815	COG0416	fatty acid biosynthetic process
FYA51_16820	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FYA51_16825	COG1399	metal-binding, possibly nucleic acid-binding protein
FYA51_16830	COG0424	maF-like protein
FYA51_16840	COG3023	N-Acetylmuramoyl-L-alanine amidase
FYA51_16845	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FYA51_16850	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FYA51_16855	COG0546	phosphoglycolate phosphatase activity
FYA51_16865	COG1530	ribonuclease E activity
FYA51_16875	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FYA51_16890	COG0133	tryptophan synthase activity
FYA51_16905	COG3228	Belongs to the MtfA family
FYA51_16915	COG0251	oxidation-reduction process
FYA51_16925	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FYA51_16940	COG2878	Part of a membrane complex involved in electron transport
FYA51_16945	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FYA51_16950	COG0411	ABC transporter
FYA51_16965	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_16980	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA51_16985	COG0410	ABC transporter
FYA51_16990	COG0411	ABC transporter
FYA51_17005	COG1268	BioY protein
FYA51_17010	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FYA51_17015	COG1122	ATPase activity
FYA51_17020	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYA51_17030	COG0271	Belongs to the BolA IbaG family
FYA51_17050	COG1196	nuclear chromosome segregation
FYA51_17055	COG0477	Major facilitator Superfamily
FYA51_17060	COG1573	uracil-dna glycosylase
FYA51_17065	COG1214	PFAM Peptidase M22, glycoprotease
FYA51_17070	COG0745	RESPONSE REGULATOR receiver
FYA51_17075	COG2205	protein histidine kinase activity
FYA51_17080	COG0450	alkyl hydroperoxide reductase
FYA51_17085	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA51_17110	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FYA51_17115	COG0560	Phosphoserine phosphatase
FYA51_17120	COG0583	DNA-binding transcription factor activity
FYA51_17125	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_17130	COG0028	Belongs to the TPP enzyme family
FYA51_17155	COG4774	siderophore transport
FYA51_17165	COG1007	ATP synthesis coupled electron transport
FYA51_17180	COG0713	ATP synthesis coupled electron transport
FYA51_17190	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA51_17195	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FYA51_17200	COG1034	ATP synthesis coupled electron transport
FYA51_17210	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FYA51_17215	COG0649	NAD binding
FYA51_17225	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA51_17230	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA51_17235	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA51_17255	COG0671	phosphoesterase, PA-phosphatase related
FYA51_17265	COG1597	lipid kinase activity
FYA51_17270	COG0583	DNA-binding transcription factor activity
FYA51_17275	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FYA51_17280	COG1733	regulation of RNA biosynthetic process
FYA51_17285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA51_17305	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
FYA51_17325	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA51_17345	COG3608	succinylglutamate desuccinylase aspartoacylase
FYA51_17350	COG0626	cystathionine gamma-synthase activity
FYA51_17355	COG0583	DNA-binding transcription factor activity
FYA51_17365	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_17370	COG0165	Argininosuccinate lyase
FYA51_17385	COG3799	methylaspartate ammonia-lyase activity
FYA51_17395	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FYA51_17405	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYA51_17410	COG0149	triose-phosphate isomerase activity
FYA51_17430	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA51_17445	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FYA51_17460	COG1183	phosphatidylcholine synthase activity
FYA51_17465	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FYA51_17470	COG0440	acetolactate synthase activity
FYA51_17475	COG0028	Belongs to the TPP enzyme family
FYA51_17480	COG1289	transmembrane transporter activity
FYA51_17490	COG3022	response to hydroperoxide
FYA51_17495	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_17540	COG2814	Major facilitator Superfamily
FYA51_17560	COG3706	GGDEF domain
FYA51_17590	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FYA51_17595	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FYA51_17605	COG1674	ftsk spoiiie
FYA51_17610	COG0492	ferredoxin-NADP+ reductase activity
FYA51_17615	COG1193	negative regulation of DNA recombination
FYA51_17625	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYA51_17645	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FYA51_17650	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FYA51_17655	COG2205	protein histidine kinase activity
FYA51_17660	COG0745	RESPONSE REGULATOR receiver
FYA51_17695	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYA51_17715	COG0612	Peptidase, M16
FYA51_17735	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FYA51_17750	COG1420	regulation of RNA biosynthetic process
FYA51_17755	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FYA51_17760	COG0497	DNA recombination
FYA51_17770	COG0735	belongs to the Fur family
FYA51_17775	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA51_17780	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FYA51_17820	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYA51_17820	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FYA51_17825	COG4311	Sarcosine oxidase, delta subunit
FYA51_17830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA51_17840	COG0583	DNA-binding transcription factor activity
FYA51_17860	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_17865	COG2030	dehydratase
FYA51_17875	COG1024	Enoyl-CoA hydratase
FYA51_17900	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA51_17925	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA51_17940	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA51_17950	COG0405	Gamma-glutamyltransferase
FYA51_17965	COG1280	lysine exporter protein (LysE YggA)
FYA51_17995	COG0583	DNA-binding transcription factor activity
FYA51_18035	COG1414	Transcriptional regulator
FYA51_18040	COG1546	Belongs to the CinA family
FYA51_18040	COG1058	Belongs to the CinA family
FYA51_18055	COG0513	Belongs to the DEAD box helicase family
FYA51_18085	COG0429	hydrolase of the alpha beta-hydrolase fold
FYA51_18090	COG4783	chaperone-mediated protein folding
FYA51_18105	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA51_18120	COG0006	proline dipeptidase activity
FYA51_18130	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA51_18175	COG0514	ATP-dependent DNA helicase (RecQ)
FYA51_18185	COG0745	RESPONSE REGULATOR receiver
FYA51_18200	COG1271	oxidase subunit
FYA51_18215	COG2894	cell division
FYA51_18220	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FYA51_18235	COG0488	(ABC) transporter
FYA51_18260	COG4608	Belongs to the ABC transporter superfamily
FYA51_18265	COG0444	Belongs to the ABC transporter superfamily
FYA51_18270	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_18275	COG0601	transmembrane transport
FYA51_18285	COG1215	transferase activity, transferring glycosyl groups
FYA51_18300	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FYA51_18310	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA51_18325	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_18330	COG2188	Transcriptional regulator
FYA51_18335	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FYA51_18340	COG2814	Major facilitator Superfamily
FYA51_18350	COG0259	pyridoxamine-phosphate oxidase activity
FYA51_18355	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FYA51_18370	COG0583	DNA-binding transcription factor activity
FYA51_18375	COG1960	acyl-CoA dehydrogenase activity
FYA51_18385	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_18390	COG0405	Gamma-glutamyltransferase
FYA51_18400	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_18410	COG0114	fumarate hydratase activity
FYA51_18415	COG0802	atpase or kinase
FYA51_18420	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYA51_18425	COG0586	Pfam SNARE associated Golgi protein
FYA51_18455	COG0617	tRNA 3'-terminal CCA addition
FYA51_18480	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA51_18485	COG2188	Transcriptional regulator
FYA51_18495	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA51_18500	COG1234	tRNA 3'-trailer cleavage
FYA51_18505	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_18515	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_18520	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_18525	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA51_18530	COG2301	Belongs to the HpcH HpaI aldolase family
FYA51_18540	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FYA51_18550	COG1024	Enoyl-CoA hydratase
FYA51_18560	COG2188	Transcriptional regulator
FYA51_18565	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FYA51_18570	COG0066	3-isopropylmalate dehydratase activity
FYA51_18585	COG0752	glycyl-tRNA synthetase alpha subunit
FYA51_18590	COG0751	glycine-tRNA ligase activity
FYA51_18595	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FYA51_18600	COG0204	Acyl-transferase
FYA51_18615	COG0242	peptide deformylase activity
FYA51_18620	COG1960	acyl-CoA dehydrogenase activity
FYA51_18625	COG0700	Nucleoside recognition
FYA51_18630	COG0469	pyruvate kinase activity
FYA51_18645	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA51_18660	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FYA51_18670	COG2154	pterin-4-alpha-carbinolamine dehydratase
FYA51_18690	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA51_18695	COG0154	amidase activity
FYA51_18705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_18715	COG0747	negative chemotaxis
FYA51_18730	COG0019	diaminopimelate decarboxylase activity
FYA51_18745	COG3712	iron ion homeostasis
FYA51_18750	COG4774	siderophore transport
FYA51_18755	COG2353	YceI-like domain
FYA51_18760	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA51_18775	COG0583	DNA-binding transcription factor activity
FYA51_18795	COG3384	dioxygenase
FYA51_18800	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA51_18835	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_18840	COG1309	transcriptional regulator
FYA51_18845	COG2982	Protein involved in outer membrane biogenesis
FYA51_18850	COG2818	Glycosylase
FYA51_18870	COG1653	transport
FYA51_18875	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA51_18880	COG3842	ATPase activity
FYA51_18885	COG0395	ABC-type sugar transport system, permease component
FYA51_18910	COG2186	Transcriptional regulator
FYA51_18930	COG1454	alcohol dehydrogenase
FYA51_18945	COG2011	ABC-type metal ion transport system permease component
FYA51_18950	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FYA51_18955	COG1501	Belongs to the glycosyl hydrolase 31 family
FYA51_18970	COG0318	PFAM AMP-dependent synthetase and ligase
FYA51_18975	COG1473	amidohydrolase
FYA51_18985	COG2855	membrane
FYA51_18990	COG1607	acyl-coa hydrolase
FYA51_18995	COG2239	Acts as a magnesium transporter
FYA51_19010	COG1522	sequence-specific DNA binding
FYA51_19015	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA51_19020	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_19045	COG0739	heme binding
FYA51_19055	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FYA51_19060	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FYA51_19070	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FYA51_19075	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYA51_19080	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYA51_19100	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYA51_19105	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYA51_19115	COG3116	cell division
FYA51_19120	COG0275	rRNA processing
FYA51_19125	COG2001	Belongs to the MraZ family
FYA51_19140	COG0418	dihydroorotase activity
FYA51_19145	COG1473	amidohydrolase
FYA51_19185	COG1522	sequence-specific DNA binding
FYA51_19195	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYA51_19200	COG4654	Cytochrome c, class I
FYA51_19255	COG2084	Dehydrogenase
FYA51_19300	COG0824	Thioesterase
FYA51_19305	COG0811	peptide transport
FYA51_19310	COG0848	biopolymer transport protein
FYA51_19335	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA51_19340	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FYA51_19345	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_19355	COG1846	Transcriptional regulator
FYA51_19360	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA51_19385	COG0183	Belongs to the thiolase family
FYA51_19395	COG1960	acyl-CoA dehydrogenase activity
FYA51_19400	COG0583	DNA-binding transcription factor activity
FYA51_19405	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_19410	COG1024	Enoyl-CoA hydratase
FYA51_19420	COG1253	flavin adenine dinucleotide binding
FYA51_19425	COG1285	pathogenesis
FYA51_19450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA51_19455	COG0697	spore germination
FYA51_19465	COG1073	alpha beta
FYA51_19490	COG0463	Glycosyl transferase, family 2
FYA51_19500	COG0786	glutamate:sodium symporter activity
FYA51_19510	COG2031	fatty acid transporter
FYA51_19525	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA51_19530	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA51_19540	COG0328	RNA-DNA hybrid ribonuclease activity
FYA51_19545	COG2226	methyltransferase
FYA51_19555	COG0741	lytic transglycosylase activity
FYA51_19555	COG1388	LysM domain
FYA51_19570	COG2979	Protein of unknown function (DUF533)
FYA51_19590	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_19605	COG3119	arylsulfatase activity
FYA51_19630	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FYA51_19650	COG0832	Belongs to the urease beta subunit family
FYA51_19660	COG0831	urea catabolic process
FYA51_19665	COG0829	nickel cation binding
FYA51_19680	COG0633	Ferredoxin
FYA51_19695	COG2188	Transcriptional regulator
FYA51_19700	COG3799	methylaspartate ammonia-lyase activity
FYA51_19720	COG2719	SpoVR family
FYA51_19725	COG2718	Belongs to the UPF0229 family
FYA51_19730	COG2766	serine protein kinase
FYA51_19735	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA51_19735	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA51_19745	COG4977	sequence-specific DNA binding
FYA51_19750	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FYA51_19775	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FYA51_19780	COG0316	Belongs to the HesB IscA family
FYA51_19790	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FYA51_19800	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FYA51_19805	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA51_19810	COG0312	modulator of DNA gyrase
FYA51_19830	COG1116	anion transmembrane transporter activity
FYA51_19835	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_19840	COG1335	isochorismatase
FYA51_19845	COG0346	lactoylglutathione lyase activity
FYA51_19850	COG0513	Belongs to the DEAD box helicase family
FYA51_19860	COG1802	Transcriptional regulator
FYA51_19865	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA51_19865	COG0045	succinate-CoA ligase (ADP-forming) activity
FYA51_19865	COG1042	CoA-binding domain protein
FYA51_19885	COG1522	sequence-specific DNA binding
FYA51_19915	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYA51_19920	COG1696	Membrane protein involved in D-alanine export
FYA51_19960	COG0439	Biotin carboxylase
FYA51_19965	COG0511	ligase activity, forming carbon-carbon bonds
FYA51_19970	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FYA51_19975	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA51_19980	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYA51_19985	COG3150	esterase
FYA51_19990	COG0557	exoribonuclease II activity
FYA51_20005	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYA51_20015	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA51_20035	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FYA51_20040	COG1678	Uncharacterized ACR, COG1678
FYA51_20085	COG1960	acyl-CoA dehydrogenase activity
FYA51_20095	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_20110	COG0411	ABC transporter
FYA51_20120	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_20145	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FYA51_20155	COG0494	nUDIX hydrolase
FYA51_20160	COG1538	Outer membrane efflux protein
FYA51_20180	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FYA51_20185	COG0237	dephospho-CoA kinase activity
FYA51_20205	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FYA51_20210	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FYA51_20225	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FYA51_20240	COG1126	abc transporter atp-binding protein
FYA51_20245	COG0765	amino acid transport
FYA51_20250	COG4597	amino acid ABC transporter
FYA51_20255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA51_20260	COG2884	Cell division ATP-binding protein ftsE
FYA51_20265	COG2177	Part of the ABC transporter FtsEX involved in
FYA51_20280	COG1194	a g-specific adenine glycosylase
FYA51_20300	COG4206	TonB-dependent receptor
FYA51_20305	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYA51_20315	COG0351	phosphomethylpyrimidine kinase
FYA51_20320	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FYA51_20330	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FYA51_20340	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FYA51_20355	COG2226	methyltransferase
FYA51_20360	COG0745	RESPONSE REGULATOR receiver
FYA51_20365	COG5002	protein histidine kinase activity
FYA51_20375	COG5002	protein histidine kinase activity
FYA51_20385	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA51_20390	COG0583	DNA-binding transcription factor activity
FYA51_20400	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FYA51_20405	COG1984	allophanate hydrolase subunit 2
FYA51_20410	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FYA51_20420	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_20430	COG1024	Enoyl-CoA hydratase
FYA51_20445	COG1802	Transcriptional regulator
FYA51_20455	COG1238	metal cluster binding
FYA51_20460	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA51_20465	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA51_20480	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FYA51_20485	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FYA51_20490	COG4988	ABC transporter
FYA51_20500	COG1294	oxidase, subunit
FYA51_20525	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FYA51_20540	COG1137	ATPase activity
FYA51_20545	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FYA51_20555	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FYA51_20560	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYA51_20560	COG2010	Cytochrome c
FYA51_20580	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA51_20595	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FYA51_20600	COG2823	Periplasmic or secreted lipoprotein
FYA51_20630	COG0471	metal ion transport
FYA51_20640	COG0772	Belongs to the SEDS family
FYA51_20645	COG0768	penicillin binding
FYA51_20655	COG1792	Involved in formation and maintenance of cell shape
FYA51_20660	COG1077	Cell shape determining protein MreB Mrl
FYA51_20685	COG0708	Exodeoxyribonuclease III
FYA51_20695	COG2860	membrane
FYA51_20705	COG0583	DNA-binding transcription factor activity
FYA51_20710	COG0473	3-isopropylmalate dehydrogenase activity
FYA51_20735	COG0583	DNA-binding transcription factor activity
FYA51_20740	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FYA51_20745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA51_20750	COG0765	amino acid transport
FYA51_20755	COG0765	amino acid transport
FYA51_20760	COG1126	abc transporter atp-binding protein
FYA51_20765	COG1794	racemase activity, acting on amino acids and derivatives
FYA51_20770	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA51_20775	COG2223	nitrite transmembrane transporter activity
FYA51_20780	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYA51_20780	COG2813	Specifically methylates the guanine in position
FYA51_20790	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA51_20835	COG0583	DNA-binding transcription factor activity
FYA51_20840	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FYA51_20845	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA51_20855	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA51_20880	COG0154	amidase activity
FYA51_20890	COG1414	Transcriptional regulator
FYA51_20900	COG1024	Enoyl-CoA hydratase
FYA51_20900	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA51_20910	COG2132	Multicopper oxidase
FYA51_20955	COG1024	Enoyl-CoA hydratase
FYA51_20960	COG1024	Enoyl-CoA hydratase
FYA51_20965	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FYA51_20975	COG0747	negative chemotaxis
FYA51_20985	COG0601	transmembrane transport
FYA51_20990	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_20995	COG0444	Belongs to the ABC transporter superfamily
FYA51_21000	COG4608	Belongs to the ABC transporter superfamily
FYA51_21010	COG2195	Cleaves the N-terminal amino acid of tripeptides
FYA51_21015	COG0210	DNA helicase
FYA51_21020	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FYA51_21035	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FYA51_21040	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FYA51_21050	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FYA51_21055	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FYA51_21060	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FYA51_21070	COG0356	it plays a direct role in the translocation of protons across the membrane
FYA51_21085	COG1024	Enoyl-CoA hydratase
FYA51_21110	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA51_21115	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA51_21120	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA51_21125	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FYA51_21130	COG2967	ApaG domain
FYA51_21140	COG0546	phosphoglycolate phosphatase activity
FYA51_21150	COG0512	Glutamine amidotransferase of anthranilate synthase
FYA51_21155	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FYA51_21160	COG0134	indole-3-glycerol-phosphate synthase activity
FYA51_21165	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_21185	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYA51_21195	COG1607	acyl-coa hydrolase
FYA51_21250	COG1802	Transcriptional regulator
FYA51_21280	COG1595	DNA-templated transcription, initiation
FYA51_21295	COG3720	iron ion transport
FYA51_21300	COG4558	Periplasmic binding protein
FYA51_21305	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA51_21315	COG1683	Conserved Protein
FYA51_21330	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA51_21345	COG3064	Membrane
FYA51_21350	COG0583	DNA-binding transcription factor activity
FYA51_21360	COG1234	tRNA 3'-trailer cleavage
FYA51_21370	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FYA51_21375	COG1802	Transcriptional regulator
FYA51_21385	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA51_21405	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_21425	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_21430	COG0583	DNA-binding transcription factor activity
FYA51_21435	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FYA51_21440	COG1522	sequence-specific DNA binding
FYA51_21445	COG0183	Belongs to the thiolase family
FYA51_21505	COG2814	Major facilitator Superfamily
FYA51_21510	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FYA51_21530	COG1999	signal sequence binding
FYA51_21535	COG0109	protoheme IX farnesyltransferase activity
FYA51_21575	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA51_21595	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FYA51_21605	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA51_21615	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FYA51_21620	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FYA51_21630	COG0067	glutamate synthase
FYA51_21630	COG0069	glutamate synthase activity
FYA51_21630	COG0070	glutamate synthase
FYA51_21640	COG3047	cAMP biosynthetic process
FYA51_21650	COG1127	ABC transporter
FYA51_21655	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FYA51_21660	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYA51_21665	COG2853	Lipoprotein
FYA51_21675	COG1131	(ABC) transporter
FYA51_21680	COG0842	Transport permease protein
FYA51_21695	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FYA51_21700	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FYA51_21710	COG0131	Imidazoleglycerol-phosphate dehydratase
FYA51_21715	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FYA51_21720	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FYA51_21730	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FYA51_21740	COG0537	adenosine 5'-monophosphoramidase activity
FYA51_21745	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYA51_21770	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FYA51_21780	COG0723	plastoquinol--plastocyanin reductase activity
FYA51_21785	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FYA51_21790	COG2857	Cytochrome c1
FYA51_21795	COG0625	glutathione transferase activity
FYA51_21800	COG2969	positive regulation of protein catabolic process
FYA51_21830	COG0583	DNA-binding transcription factor activity
FYA51_21835	COG0492	ferredoxin-NADP+ reductase activity
FYA51_21855	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_21865	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA51_21880	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_21940	COG3504	Conjugal transfer protein
FYA51_21960	COG0697	spore germination
FYA51_21980	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FYA51_21985	COG0747	negative chemotaxis
FYA51_21995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA51_22005	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FYA51_22015	COG0513	Belongs to the DEAD box helicase family
FYA51_22020	COG1280	lysine exporter protein (LysE YggA)
FYA51_22045	COG0583	DNA-binding transcription factor activity
FYA51_22055	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FYA51_22065	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYA51_22070	COG0154	amidase activity
FYA51_22075	COG1609	Transcriptional regulator
FYA51_22095	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FYA51_22100	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FYA51_22105	COG3842	ATPase activity
FYA51_22110	COG1653	transport
FYA51_22115	COG1175	transmembrane transport
FYA51_22120	COG0395	ABC-type sugar transport system, permease component
FYA51_22145	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA51_22155	COG1280	lysine exporter protein (LysE YggA)
FYA51_22170	COG1960	acyl-CoA dehydrogenase activity
FYA51_22180	COG0183	Belongs to the thiolase family
FYA51_22185	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FYA51_22205	COG3181	Tripartite tricarboxylate transporter family receptor
FYA51_22230	COG2922	Belongs to the Smg family
FYA51_22255	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA51_22260	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_22265	COG1028	Short-chain dehydrogenase reductase Sdr
FYA51_22270	COG1012	belongs to the aldehyde dehydrogenase family
FYA51_22280	COG0028	Belongs to the TPP enzyme family
FYA51_22285	COG1522	sequence-specific DNA binding
FYA51_22290	COG3781	membrane
FYA51_22300	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FYA51_22320	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FYA51_22345	COG1304	FMN binding
FYA51_22350	COG1254	Belongs to the acylphosphatase family
FYA51_22365	COG1414	Transcriptional regulator
FYA51_22385	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FYA51_22390	COG0594	ribonuclease P activity
FYA51_22395	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FYA51_22405	COG0753	catalase activity
FYA51_22410	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA51_22415	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA51_22425	COG2175	clavaminate synthase activity
FYA51_22430	COG1473	amidohydrolase
FYA51_22435	COG4608	Belongs to the ABC transporter superfamily
FYA51_22440	COG0444	Belongs to the ABC transporter superfamily
FYA51_22450	COG0601	transmembrane transport
FYA51_22455	COG0747	negative chemotaxis
FYA51_22475	COG5002	protein histidine kinase activity
FYA51_22475	COG3850	Histidine kinase
FYA51_22495	COG0436	Aminotransferase
FYA51_22500	COG1278	Cold shock