locus-tag class description AV743_00005 PF01134 Glucose inhibited division protein A AV743_00005 PF13932 GidA associated domain AV743_00010 PF02527 rRNA small subunit methyltransferase G AV743_00015 PF13614 AAA domain AV743_00025 PF17762 HTH domain found in ParB protein AV743_00025 PF02195 ParB-like nuclease domain AV743_00030 PF00710 Asparaginase, N-terminal AV743_00030 PF17763 Glutaminase/Asparaginase C-terminal domain AV743_00035 PF17763 Glutaminase/Asparaginase C-terminal domain AV743_00035 PF00710 Asparaginase, N-terminal AV743_00055 PF03143 Elongation factor Tu C-terminal domain AV743_00055 PF00009 Elongation factor Tu GTP binding domain AV743_00055 PF03144 Elongation factor Tu domain 2 AV743_00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AV743_00070 PF00467 KOW motif AV743_00070 PF02357 Transcription termination factor nusG AV743_00075 PF00298 Ribosomal protein L11, RNA binding domain AV743_00075 PF03946 Ribosomal protein L11, N-terminal domain AV743_00080 PF00687 Ribosomal protein L1p/L10e family AV743_00085 PF00466 Ribosomal protein L10 AV743_00090 PF00542 Ribosomal protein L7/L12 C-terminal domain AV743_00090 PF16320 Ribosomal protein L7/L12 dimerisation domain AV743_00095 PF10385 RNA polymerase beta subunit external 1 domain AV743_00095 PF04565 RNA polymerase Rpb2, domain 3 AV743_00095 PF04561 RNA polymerase Rpb2, domain 2 AV743_00095 PF04563 RNA polymerase beta subunit AV743_00095 PF00562 RNA polymerase Rpb2, domain 6 AV743_00095 PF04560 RNA polymerase Rpb2, domain 7 AV743_00100 PF04983 RNA polymerase Rpb1, domain 3 AV743_00100 PF04998 RNA polymerase Rpb1, domain 5 AV743_00100 PF00623 RNA polymerase Rpb1, domain 2 AV743_00100 PF04997 RNA polymerase Rpb1, domain 1 AV743_00100 PF05000 RNA polymerase Rpb1, domain 4 AV743_00130 PF00072 Response regulator receiver domain AV743_00130 PF00486 Transcriptional regulatory protein, C terminal AV743_00140 PF02515 CoA-transferase family III AV743_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_00160 PF03466 LysR substrate binding domain AV743_00165 PF00378 Enoyl-CoA hydratase/isomerase AV743_00185 PF02091 Glycyl-tRNA synthetase alpha subunit AV743_00190 PF05746 DALR anticodon binding domain AV743_00190 PF02092 Glycyl-tRNA synthetase beta subunit AV743_00200 PF01553 Acyltransferase AV743_00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV743_00215 PF01327 Polypeptide deformylase AV743_00255 PF00561 alpha/beta hydrolase fold AV743_00260 PF00561 alpha/beta hydrolase fold AV743_00260 PF07021 Methionine biosynthesis protein MetW AV743_00275 PF07690 Major Facilitator Superfamily AV743_00280 PF13609 Gram-negative porin AV743_00285 PF01177 Asp/Glu/Hydantoin racemase AV743_00290 PF00005 ABC transporter AV743_00295 PF00528 Binding-protein-dependent transport system inner membrane component AV743_00300 PF00528 Binding-protein-dependent transport system inner membrane component AV743_00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_00340 PF03401 Tripartite tricarboxylate transporter family receptor AV743_00355 PF00970 Oxidoreductase FAD-binding domain AV743_00355 PF00111 2Fe-2S iron-sulfur cluster binding domain AV743_00355 PF00175 Oxidoreductase NAD-binding domain AV743_00360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV743_00370 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_00400 PF00183 Hsp90 protein AV743_00405 PF00043 Glutathione S-transferase, C-terminal domain AV743_00405 PF13417 Glutathione S-transferase, N-terminal domain AV743_00410 PF01510 N-acetylmuramoyl-L-alanine amidase AV743_00420 PF01578 Cytochrome C assembly protein AV743_00425 PF00448 SRP54-type protein, GTPase domain AV743_00425 PF02881 SRP54-type protein, helical bundle domain AV743_00425 PF02978 Signal peptide binding domain AV743_00435 PF00293 NUDIX domain AV743_00445 PF01960 ArgJ family AV743_00460 PF12911 N-terminal TM domain of oligopeptide transport permease C AV743_00460 PF00528 Binding-protein-dependent transport system inner membrane component AV743_00470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_00475 PF01926 50S ribosome-binding GTPase AV743_00475 PF12631 MnmE helical domain AV743_00475 PF10396 GTP-binding protein TrmE N-terminus AV743_00495 PF00892 EamA-like transporter family AV743_00505 PF00437 Type II/IV secretion system protein AV743_00510 PF03743 Bacterial conjugation TrbI-like protein AV743_00515 PF03524 Conjugal transfer protein AV743_00520 PF04335 VirB8 protein AV743_00530 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AV743_00535 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AV743_00540 PF05101 Type IV secretory pathway, VirB3-like protein AV743_00545 PF04956 TrbC/VIRB2 family AV743_00550 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AV743_00550 PF03440 Aerolysin/Pertussis toxin (APT) domain AV743_00555 PF09276 Pertussis toxin S5 subunit AV743_00560 PF09275 Pertussis toxin S4 subunit AV743_00565 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AV743_00565 PF03440 Aerolysin/Pertussis toxin (APT) domain AV743_00570 PF02917 Pertussis toxin, subunit 1 AV743_00575 PF03401 Tripartite tricarboxylate transporter family receptor AV743_00585 PF00902 Sec-independent protein translocase protein (TatC) AV743_00590 PF02416 mttA/Hcf106 family AV743_00595 PF02416 mttA/Hcf106 family AV743_00600 PF01230 HIT domain AV743_00605 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AV743_00610 PF01502 Phosphoribosyl-AMP cyclohydrolase AV743_00615 PF00977 Histidine biosynthesis protein AV743_00620 PF00977 Histidine biosynthesis protein AV743_00625 PF00117 Glutamine amidotransferase class-I AV743_00630 PF00475 Imidazoleglycerol-phosphate dehydratase AV743_00635 PF00155 Aminotransferase class I and II AV743_00640 PF00815 Histidinol dehydrogenase AV743_00645 PF01634 ATP phosphoribosyltransferase AV743_00650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV743_00660 PF01061 ABC-2 type transporter AV743_00675 PF04333 MlaA lipoprotein AV743_00680 PF02470 MlaD protein AV743_00685 PF02405 Permease MlaE AV743_00690 PF00005 ABC transporter AV743_00695 PF03401 Tripartite tricarboxylate transporter family receptor AV743_00700 PF03922 OmpW family AV743_00705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_00705 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AV743_00710 PF01493 GXGXG motif AV743_00710 PF00310 Glutamine amidotransferases class-II AV743_00710 PF01645 Conserved region in glutamate synthase AV743_00710 PF04898 Glutamate synthase central domain AV743_00720 PF08240 Alcohol dehydrogenase GroES-like domain AV743_00720 PF00107 Zinc-binding dehydrogenase AV743_00725 PF00756 Putative esterase AV743_00735 PF00140 Sigma-70 factor, region 1.2 AV743_00735 PF04545 Sigma-70, region 4 AV743_00735 PF04542 Sigma-70 region 2 AV743_00740 PF00149 Calcineurin-like phosphoesterase AV743_00745 PF00999 Sodium/hydrogen exchanger family AV743_00755 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AV743_00755 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AV743_00760 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV743_00775 PF00510 Cytochrome c oxidase subunit III AV743_00795 PF02628 Cytochrome oxidase assembly protein AV743_00800 PF01040 UbiA prenyltransferase family AV743_00805 PF02630 SCO1/SenC AV743_00825 PF14602 Hexapeptide repeat of succinyl-transferase AV743_00825 PF00132 Bacterial transferase hexapeptide (six repeats) AV743_00825 PF12804 MobA-like NTP transferase domain AV743_00830 PF07690 Major Facilitator Superfamily AV743_00835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AV743_00835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AV743_00835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AV743_00850 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AV743_00850 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AV743_00875 PF02653 Branched-chain amino acid transport system / permease component AV743_00885 PF00005 ABC transporter AV743_00895 PF13458 Periplasmic binding protein AV743_00900 PF03466 LysR substrate binding domain AV743_00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_00910 PF01425 Amidase AV743_00915 PF00175 Oxidoreductase NAD-binding domain AV743_00915 PF00111 2Fe-2S iron-sulfur cluster binding domain AV743_00920 PF09297 NADH pyrophosphatase zinc ribbon domain AV743_00920 PF00293 NUDIX domain AV743_00925 PF00440 Bacterial regulatory proteins, tetR family AV743_00930 PF02515 CoA-transferase family III AV743_00935 PF14765 Polyketide synthase dehydratase AV743_00935 PF08659 KR domain AV743_00935 PF00550 Phosphopantetheine attachment site AV743_00935 PF02801 Beta-ketoacyl synthase, C-terminal domain AV743_00935 PF00109 Beta-ketoacyl synthase, N-terminal domain AV743_00935 PF16197 Ketoacyl-synthetase C-terminal extension AV743_00935 PF08990 Erythronolide synthase docking AV743_00935 PF08240 Alcohol dehydrogenase GroES-like domain AV743_00935 PF00698 Acyl transferase domain AV743_00940 PF03401 Tripartite tricarboxylate transporter family receptor AV743_00945 PF00378 Enoyl-CoA hydratase/isomerase AV743_00960 PF00528 Binding-protein-dependent transport system inner membrane component AV743_00965 PF07702 UTRA domain AV743_00965 PF00392 Bacterial regulatory proteins, gntR family AV743_00975 PF03401 Tripartite tricarboxylate transporter family receptor AV743_00980 PF07702 UTRA domain AV743_00980 PF00392 Bacterial regulatory proteins, gntR family AV743_00990 PF02719 Polysaccharide biosynthesis protein AV743_01000 PF10997 Alternate to MurJ AV743_01005 PF00862 Sucrose synthase AV743_01005 PF00534 Glycosyl transferases group 1 AV743_01010 PF02397 Bacterial sugar transferase AV743_01015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AV743_01025 PF02350 UDP-N-acetylglucosamine 2-epimerase AV743_01030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AV743_01035 PF00132 Bacterial transferase hexapeptide (six repeats) AV743_01040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AV743_01040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AV743_01045 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AV743_01050 PF00534 Glycosyl transferases group 1 AV743_01050 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AV743_01060 PF03309 Type III pantothenate kinase AV743_01070 PF02405 Permease MlaE AV743_01075 PF00005 ABC transporter AV743_01100 PF00768 D-alanyl-D-alanine carboxypeptidase AV743_01100 PF07943 Penicillin-binding protein 5, C-terminal domain AV743_01105 PF01063 Amino-transferase class IV AV743_01110 PF04359 Protein of unknown function (DUF493) AV743_01115 PF03099 Biotin/lipoate A/B protein ligase family AV743_01120 PF04055 Radical SAM superfamily AV743_01120 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AV743_01125 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AV743_01130 PF04321 RmlD substrate binding domain AV743_01135 PF16363 GDP-mannose 4,6 dehydratase AV743_01150 PF01053 Cys/Met metabolism PLP-dependent enzyme AV743_01155 PF00085 Thioredoxin AV743_01155 PF01323 DSBA-like thioredoxin domain AV743_01165 PF05746 DALR anticodon binding domain AV743_01165 PF03485 Arginyl tRNA synthetase N terminal domain AV743_01165 PF00750 tRNA synthetases class I (R) AV743_01185 PF00528 Binding-protein-dependent transport system inner membrane component AV743_01190 PF00528 Binding-protein-dependent transport system inner membrane component AV743_01195 PF13416 Bacterial extracellular solute-binding protein AV743_01200 PF17912 MalK OB fold domain AV743_01200 PF00005 ABC transporter AV743_01205 PF00149 Calcineurin-like phosphoesterase AV743_01215 PF00005 ABC transporter AV743_01215 PF12857 TOBE-like domain AV743_01220 PF00528 Binding-protein-dependent transport system inner membrane component AV743_01235 PF00356 Bacterial regulatory proteins, lacI family AV743_01245 PF01425 Amidase AV743_01250 PF08502 LeuA allosteric (dimerisation) domain AV743_01250 PF00682 HMGL-like AV743_01260 PF00309 Sigma-54 factor, Activator interacting domain (AID) AV743_01260 PF04552 Sigma-54, DNA binding domain AV743_01260 PF04963 Sigma-54 factor, core binding domain AV743_01270 PF03466 LysR substrate binding domain AV743_01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_01290 PF00291 Pyridoxal-phosphate dependent enzyme AV743_01290 PF00585 C-terminal regulatory domain of Threonine dehydratase AV743_01305 PF07729 FCD domain AV743_01305 PF00392 Bacterial regulatory proteins, gntR family AV743_01310 PF02515 CoA-transferase family III AV743_01320 PF00378 Enoyl-CoA hydratase/isomerase AV743_01325 PF01494 FAD binding domain AV743_01330 PF01494 FAD binding domain AV743_01335 PF03401 Tripartite tricarboxylate transporter family receptor AV743_01350 PF02626 Carboxyltransferase domain, subdomain A and B AV743_01355 PF02682 Carboxyltransferase domain, subdomain C and D AV743_01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_01365 PF03466 LysR substrate binding domain AV743_01370 PF01842 ACT domain AV743_01370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV743_01370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV743_01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_01380 PF00672 HAMP domain AV743_01380 PF00512 His Kinase A (phospho-acceptor) domain AV743_01385 PF00072 Response regulator receiver domain AV743_01385 PF00486 Transcriptional regulatory protein, C terminal AV743_01390 PF00512 His Kinase A (phospho-acceptor) domain AV743_01390 PF00989 PAS fold AV743_01390 PF11808 Phosphate regulon sensor protein PhoR AV743_01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_01395 PF00486 Transcriptional regulatory protein, C terminal AV743_01395 PF00072 Response regulator receiver domain AV743_01400 PF01209 ubiE/COQ5 methyltransferase family AV743_01415 PF03109 ABC1 family AV743_01435 PF04536 TPM domain AV743_01445 PF00270 DEAD/DEAH box helicase AV743_01445 PF00271 Helicase conserved C-terminal domain AV743_01450 PF01810 LysE type translocator AV743_01455 PF16658 Class II release factor RF3, C-terminal domain AV743_01455 PF00009 Elongation factor Tu GTP binding domain AV743_01455 PF03144 Elongation factor Tu domain 2 AV743_01465 PF00210 Ferritin-like domain AV743_01505 PF01588 Putative tRNA binding domain AV743_01505 PF09334 tRNA synthetases class I (M) AV743_01515 PF10609 NUBPL iron-transfer P-loop NTPase AV743_01530 PF00692 dUTPase AV743_01555 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AV743_01555 PF01276 Orn/Lys/Arg decarboxylase, major domain AV743_01555 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AV743_01570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AV743_01570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AV743_01575 PF02535 ZIP Zinc transporter AV743_01580 PF01571 Aminomethyltransferase folate-binding domain AV743_01580 PF08669 Glycine cleavage T-protein C-terminal barrel domain AV743_01585 PF01597 Glycine cleavage H-protein AV743_01590 PF02347 Glycine cleavage system P-protein AV743_01595 PF00392 Bacterial regulatory proteins, gntR family AV743_01595 PF07729 FCD domain AV743_01600 PF02515 CoA-transferase family III AV743_01630 PF09278 MerR, DNA binding AV743_01630 PF00376 MerR family regulatory protein AV743_01655 PF01070 FMN-dependent dehydrogenase AV743_01665 PF03401 Tripartite tricarboxylate transporter family receptor AV743_01670 PF01425 Amidase AV743_01675 PF09339 IclR helix-turn-helix domain AV743_01675 PF01614 Bacterial transcriptional regulator AV743_01680 PF01751 Toprim domain AV743_01680 PF00204 DNA gyrase B AV743_01680 PF00986 DNA gyrase B subunit, carboxyl terminus AV743_01680 PF18053 DNA gyrase B subunit insert domain AV743_01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_01685 PF00712 DNA polymerase III beta subunit, N-terminal domain AV743_01685 PF02767 DNA polymerase III beta subunit, central domain AV743_01685 PF02768 DNA polymerase III beta subunit, C-terminal domain AV743_01690 PF11638 DnaA N-terminal domain AV743_01690 PF00308 Bacterial dnaA protein AV743_01690 PF08299 Bacterial dnaA protein helix-turn-helix AV743_01695 PF00468 Ribosomal protein L34 AV743_01700 PF00825 Ribonuclease P AV743_01705 PF01809 Putative membrane protein insertion efficiency factor AV743_01710 PF02096 60Kd inner membrane protein AV743_01710 PF14849 YidC periplasmic domain AV743_01725 PF03466 LysR substrate binding domain AV743_01725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_01745 PF00589 Phage integrase family AV743_01780 PF03837 RecT family AV743_01840 PF07859 alpha/beta hydrolase fold AV743_01850 PF02653 Branched-chain amino acid transport system / permease component AV743_01855 PF11862 Domain of unknown function (DUF3382) AV743_01855 PF02653 Branched-chain amino acid transport system / permease component AV743_01860 PF00005 ABC transporter AV743_01860 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_01865 PF00005 ABC transporter AV743_01880 PF00378 Enoyl-CoA hydratase/isomerase AV743_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_01885 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_01890 PF00501 AMP-binding enzyme AV743_01890 PF13193 AMP-binding enzyme C-terminal domain AV743_01910 PF00202 Aminotransferase class-III AV743_01915 PF02581 Thiamine monophosphate synthase AV743_01920 PF08543 Phosphomethylpyrimidine kinase AV743_01925 PF00301 Rubredoxin AV743_01930 PF02622 Uncharacterized ACR, COG1678 AV743_01935 PF03652 Holliday junction resolvase AV743_01940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV743_01940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV743_01945 PF01979 Amidohydrolase family AV743_01950 PF01553 Acyltransferase AV743_01955 PF00149 Calcineurin-like phosphoesterase AV743_01965 PF00912 Transglycosylase AV743_01980 PF00501 AMP-binding enzyme AV743_01980 PF13193 AMP-binding enzyme C-terminal domain AV743_01985 PF03401 Tripartite tricarboxylate transporter family receptor AV743_02000 PF12706 Beta-lactamase superfamily domain AV743_02005 PF03401 Tripartite tricarboxylate transporter family receptor AV743_02020 PF11737 Protein of unknown function (DUF3300) AV743_02030 PF03707 Bacterial signalling protein N terminal repeat AV743_02030 PF00990 Diguanylate cyclase, GGDEF domain AV743_02030 PF00563 EAL domain AV743_02035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AV743_02035 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AV743_02040 PF13532 2OG-Fe(II) oxygenase superfamily AV743_02045 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AV743_02050 PF04463 Protein of unknown function (DUF523) AV743_02055 PF00005 ABC transporter AV743_02060 PF01032 FecCD transport family AV743_02065 PF01497 Periplasmic binding protein AV743_02070 PF05171 Haemin-degrading HemS.ChuX domain AV743_02075 PF04886 PT repeat AV743_02075 PF07715 TonB-dependent Receptor Plug Domain AV743_02075 PF00593 TonB dependent receptor AV743_02080 PF16220 Domain of unknown function (DUF4880) AV743_02080 PF04773 FecR protein AV743_02085 PF08281 Sigma-70, region 4 AV743_02085 PF04542 Sigma-70 region 2 AV743_02110 PF02423 Ornithine cyclodeaminase/mu-crystallin family AV743_02120 PF00392 Bacterial regulatory proteins, gntR family AV743_02120 PF07729 FCD domain AV743_02140 PF00171 Aldehyde dehydrogenase family AV743_02150 PF00970 Oxidoreductase FAD-binding domain AV743_02150 PF00111 2Fe-2S iron-sulfur cluster binding domain AV743_02150 PF00175 Oxidoreductase NAD-binding domain AV743_02180 PF03458 UPF0126 domain AV743_02185 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV743_02185 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AV743_02190 PF03372 Endonuclease/Exonuclease/phosphatase family AV743_02195 PF00156 Phosphoribosyl transferase domain AV743_02200 PF02934 GatB/GatE catalytic domain AV743_02200 PF02637 GatB domain AV743_02205 PF01425 Amidase AV743_02210 PF02686 Glu-tRNAGln amidotransferase C subunit AV743_02220 PF04085 rod shape-determining protein MreC AV743_02230 PF03717 Penicillin-binding Protein dimerisation domain AV743_02230 PF00905 Penicillin binding protein transpeptidase domain AV743_02235 PF01098 Cell cycle protein AV743_02240 PF02615 Malate/L-lactate dehydrogenase AV743_02245 PF00939 Sodium:sulfate symporter transmembrane region AV743_02250 PF00440 Bacterial regulatory proteins, tetR family AV743_02260 PF00696 Amino acid kinase family AV743_02265 PF03180 NLPA lipoprotein AV743_02270 PF00578 AhpC/TSA family AV743_02275 PF04972 BON domain AV743_02280 PF13580 SIS domain AV743_02290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV743_02295 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AV743_02295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AV743_02315 PF02515 CoA-transferase family III AV743_02320 PF03401 Tripartite tricarboxylate transporter family receptor AV743_02325 PF02515 CoA-transferase family III AV743_02340 PF09339 IclR helix-turn-helix domain AV743_02345 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_02355 PF03401 Tripartite tricarboxylate transporter family receptor AV743_02360 PF00378 Enoyl-CoA hydratase/isomerase AV743_02360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV743_02360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV743_02365 PF02515 CoA-transferase family III AV743_02370 PF00205 Thiamine pyrophosphate enzyme, central domain AV743_02370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_02370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_02375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_02375 PF03466 LysR substrate binding domain AV743_02385 PF03401 Tripartite tricarboxylate transporter family receptor AV743_02395 PF03401 Tripartite tricarboxylate transporter family receptor AV743_02405 PF00892 EamA-like transporter family AV743_02410 PF01810 LysE type translocator AV743_02415 PF12146 Serine aminopeptidase, S33 AV743_02435 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AV743_02440 PF00535 Glycosyl transferase family 2 AV743_02455 PF03616 Sodium/glutamate symporter AV743_02465 PF02667 Short chain fatty acid transporter AV743_02480 PF00929 Exonuclease AV743_02495 PF00009 Elongation factor Tu GTP binding domain AV743_02495 PF03764 Elongation factor G, domain IV AV743_02495 PF14492 Elongation Factor G, domain II AV743_02495 PF00679 Elongation factor G C-terminus AV743_02495 PF03144 Elongation factor Tu domain 2 AV743_02500 PF00582 Universal stress protein family AV743_02510 PF00155 Aminotransferase class I and II AV743_02510 PF00392 Bacterial regulatory proteins, gntR family AV743_02520 PF02308 MgtC family AV743_02525 PF03471 Transporter associated domain AV743_02525 PF03741 Integral membrane protein TerC family AV743_02530 PF02515 CoA-transferase family III AV743_02535 PF00378 Enoyl-CoA hydratase/isomerase AV743_02540 PF03401 Tripartite tricarboxylate transporter family receptor AV743_02545 PF03466 LysR substrate binding domain AV743_02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_02550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_02550 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_02550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_02565 PF00108 Thiolase, N-terminal domain AV743_02565 PF02803 Thiolase, C-terminal domain AV743_02580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_02580 PF03466 LysR substrate binding domain AV743_02585 PF00313 'Cold-shock' DNA-binding domain AV743_02595 PF07729 FCD domain AV743_02595 PF00392 Bacterial regulatory proteins, gntR family AV743_02600 PF00171 Aldehyde dehydrogenase family AV743_02605 PF02667 Short chain fatty acid transporter AV743_02610 PF00970 Oxidoreductase FAD-binding domain AV743_02610 PF00042 Globin AV743_02610 PF00175 Oxidoreductase NAD-binding domain AV743_02615 PF01042 Endoribonuclease L-PSP AV743_02620 PF03466 LysR substrate binding domain AV743_02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_02635 PF02515 CoA-transferase family III AV743_02645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_02645 PF03466 LysR substrate binding domain AV743_02650 PF02515 CoA-transferase family III AV743_02665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_02665 PF00205 Thiamine pyrophosphate enzyme, central domain AV743_02665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_02675 PF09084 NMT1/THI5 like AV743_02680 PF00005 ABC transporter AV743_02685 PF00528 Binding-protein-dependent transport system inner membrane component AV743_02695 PF13193 AMP-binding enzyme C-terminal domain AV743_02695 PF00501 AMP-binding enzyme AV743_02700 PF08240 Alcohol dehydrogenase GroES-like domain AV743_02700 PF00107 Zinc-binding dehydrogenase AV743_02705 PF00392 Bacterial regulatory proteins, gntR family AV743_02705 PF07729 FCD domain AV743_02715 PF07729 FCD domain AV743_02715 PF00392 Bacterial regulatory proteins, gntR family AV743_02720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_02720 PF00205 Thiamine pyrophosphate enzyme, central domain AV743_02720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_02740 PF01063 Amino-transferase class IV AV743_02745 PF00005 ABC transporter AV743_02750 PF00528 Binding-protein-dependent transport system inner membrane component AV743_02760 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_02770 PF02321 Outer membrane efflux protein AV743_02775 PF13533 Biotin-lipoyl like AV743_02780 PF03412 Peptidase C39 family AV743_02780 PF00005 ABC transporter AV743_02780 PF00664 ABC transporter transmembrane region AV743_02785 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AV743_02785 PF02382 N-terminal domain in RTX protein AV743_02785 PF03497 Anthrax toxin LF subunit AV743_02795 PF02794 RTX toxin acyltransferase family AV743_02800 PF00171 Aldehyde dehydrogenase family AV743_02805 PF03401 Tripartite tricarboxylate transporter family receptor AV743_02810 PF01266 FAD dependent oxidoreductase AV743_02815 PF02538 Hydantoinase B/oxoprolinase AV743_02820 PF05378 Hydantoinase/oxoprolinase N-terminal region AV743_02820 PF01968 Hydantoinase/oxoprolinase AV743_02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_02825 PF03466 LysR substrate binding domain AV743_02835 PF00348 Polyprenyl synthetase AV743_02845 PF00829 Ribosomal prokaryotic L21 protein AV743_02850 PF01016 Ribosomal L27 protein AV743_02855 PF01018 GTP1/OBG AV743_02855 PF01926 50S ribosome-binding GTPase AV743_02860 PF01472 PUA domain AV743_02860 PF00696 Amino acid kinase family AV743_02905 PF04773 FecR protein AV743_02905 PF16220 Domain of unknown function (DUF4880) AV743_02910 PF00593 TonB dependent receptor AV743_02910 PF07715 TonB-dependent Receptor Plug Domain AV743_02915 PF04264 YceI-like domain AV743_02925 PF16653 Saccharopine dehydrogenase C-terminal domain AV743_02925 PF03435 Saccharopine dehydrogenase NADP binding domain AV743_02930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AV743_02955 PF00528 Binding-protein-dependent transport system inner membrane component AV743_02960 PF00528 Binding-protein-dependent transport system inner membrane component AV743_02965 PF00005 ABC transporter AV743_02965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_02970 PF01425 Amidase AV743_02975 PF00202 Aminotransferase class-III AV743_03000 PF01329 Pterin 4 alpha carbinolamine dehydratase AV743_03010 PF00483 Nucleotidyl transferase AV743_03015 PF01636 Phosphotransferase enzyme family AV743_03020 PF04453 LPS transport system D AV743_03025 PF00639 PPIC-type PPIASE domain AV743_03025 PF09312 SurA N-terminal domain AV743_03030 PF00398 Ribosomal RNA adenine dimethylase AV743_03035 PF02595 Glycerate kinase family AV743_03040 PF00224 Pyruvate kinase, barrel domain AV743_03040 PF02887 Pyruvate kinase, alpha/beta domain AV743_03045 PF07670 Nucleoside recognition AV743_03100 PF00378 Enoyl-CoA hydratase/isomerase AV743_03105 PF00378 Enoyl-CoA hydratase/isomerase AV743_03110 PF01256 Carbohydrate kinase AV743_03130 PF00528 Binding-protein-dependent transport system inner membrane component AV743_03135 PF00528 Binding-protein-dependent transport system inner membrane component AV743_03135 PF12911 N-terminal TM domain of oligopeptide transport permease C AV743_03140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_03140 PF00005 ABC transporter AV743_03150 PF07687 Peptidase dimerisation domain AV743_03150 PF01546 Peptidase family M20/M25/M40 AV743_03160 PF13361 UvrD-like helicase C-terminal domain AV743_03160 PF00580 UvrD/REP helicase N-terminal domain AV743_03165 PF17764 3′ DNA-binding domain (3′BD) AV743_03165 PF00271 Helicase conserved C-terminal domain AV743_03165 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AV743_03165 PF18074 Primosomal protein N C-terminal domain AV743_03165 PF00270 DEAD/DEAH box helicase AV743_03170 PF01208 Uroporphyrinogen decarboxylase (URO-D) AV743_03180 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AV743_03185 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV743_03185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV743_03190 PF00231 ATP synthase AV743_03195 PF00306 ATP synthase alpha/beta chain, C terminal domain AV743_03195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV743_03195 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV743_03200 PF00213 ATP synthase delta (OSCP) subunit AV743_03205 PF00430 ATP synthase B/B' CF(0) AV743_03210 PF00137 ATP synthase subunit C AV743_03215 PF00119 ATP synthase A chain AV743_03240 PF00378 Enoyl-CoA hydratase/isomerase AV743_03245 PF17820 PDZ domain AV743_03245 PF13180 PDZ domain AV743_03250 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_03250 PF13192 Thioredoxin domain AV743_03260 PF01171 PP-loop family AV743_03270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV743_03270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV743_03270 PF01842 ACT domain AV743_03275 PF10411 Disulfide bond isomerase protein N-terminus AV743_03275 PF13098 Thioredoxin-like domain AV743_03280 PF01494 FAD binding domain AV743_03285 PF03562 MltA specific insert domain AV743_03285 PF06725 3D domain AV743_03290 PF04379 ApaG domain AV743_03300 PF13419 Haloacid dehalogenase-like hydrolase AV743_03305 PF00425 chorismate binding enzyme AV743_03305 PF04715 Anthranilate synthase component I, N terminal region AV743_03310 PF00117 Glutamine amidotransferase class-I AV743_03315 PF00591 Glycosyl transferase family, a/b domain AV743_03315 PF02885 Glycosyl transferase family, helical bundle domain AV743_03320 PF00218 Indole-3-glycerol phosphate synthase AV743_03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_03345 PF03466 LysR substrate binding domain AV743_03350 PF00551 Formyl transferase AV743_03360 PF01613 Flavin reductase like domain AV743_03365 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AV743_03365 PF01243 Pyridoxamine 5'-phosphate oxidase AV743_03375 PF07690 Major Facilitator Superfamily AV743_03380 PF00899 ThiF family AV743_03385 PF00392 Bacterial regulatory proteins, gntR family AV743_03385 PF07702 UTRA domain AV743_03390 PF00501 AMP-binding enzyme AV743_03390 PF13193 AMP-binding enzyme C-terminal domain AV743_03395 PF03401 Tripartite tricarboxylate transporter family receptor AV743_03410 PF01063 Amino-transferase class IV AV743_03415 PF04715 Anthranilate synthase component I, N terminal region AV743_03415 PF00425 chorismate binding enzyme AV743_03420 PF17760 UvrA interaction domain AV743_03420 PF17755 UvrA DNA-binding domain AV743_03420 PF00005 ABC transporter AV743_03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_03430 PF03466 LysR substrate binding domain AV743_03435 PF00535 Glycosyl transferase family 2 AV743_03440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_03445 PF00528 Binding-protein-dependent transport system inner membrane component AV743_03480 PF03776 Septum formation topological specificity factor MinE AV743_03485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AV743_03490 PF03775 Septum formation inhibitor MinC, C-terminal domain AV743_03490 PF05209 Septum formation inhibitor MinC, N-terminal domain AV743_03495 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV743_03495 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AV743_03500 PF01654 Cytochrome bd terminal oxidase subunit I AV743_03510 PF02702 Osmosensitive K+ channel His kinase sensor domain AV743_03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_03510 PF13493 Domain of unknown function (DUF4118) AV743_03515 PF00486 Transcriptional regulatory protein, C terminal AV743_03515 PF00072 Response regulator receiver domain AV743_03530 PF03401 Tripartite tricarboxylate transporter family receptor AV743_03535 PF04391 Protein of unknown function (DUF533) AV743_03555 PF01476 LysM domain AV743_03555 PF01464 Transglycosylase SLT domain AV743_03565 PF08241 Methyltransferase domain AV743_03570 PF00075 RNase H AV743_03630 PF00378 Enoyl-CoA hydratase/isomerase AV743_03635 PF00106 short chain dehydrogenase AV743_03645 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_03645 PF00005 ABC transporter AV743_03650 PF00005 ABC transporter AV743_03655 PF02653 Branched-chain amino acid transport system / permease component AV743_03665 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_03665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_03665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_03670 PF00440 Bacterial regulatory proteins, tetR family AV743_03670 PF08361 MAATS-type transcriptional repressor, C-terminal region AV743_03675 PF14535 AMP-binding enzyme C-terminal domain AV743_03675 PF00501 AMP-binding enzyme AV743_03680 PF02515 CoA-transferase family III AV743_03700 PF04285 Protein of unknown function (DUF444) AV743_03705 PF04293 SpoVR like protein AV743_03720 PF03401 Tripartite tricarboxylate transporter family receptor AV743_03725 PF07476 Methylaspartate ammonia-lyase C-terminus AV743_03725 PF05034 Methylaspartate ammonia-lyase N-terminus AV743_03730 PF07702 UTRA domain AV743_03730 PF00392 Bacterial regulatory proteins, gntR family AV743_03750 PF09278 MerR, DNA binding AV743_03750 PF00376 MerR family regulatory protein AV743_03755 PF01774 UreD urease accessory protein AV743_03760 PF00547 Urease, gamma subunit AV743_03765 PF04955 HupE / UreJ protein AV743_03770 PF00699 Urease beta subunit AV743_03775 PF01979 Amidohydrolase family AV743_03775 PF00449 Urease alpha-subunit, N-terminal domain AV743_03780 PF02814 UreE urease accessory protein, N-terminal domain AV743_03780 PF05194 UreE urease accessory protein, C-terminal domain AV743_03785 PF01730 UreF AV743_03790 PF02492 CobW/HypB/UreG, nucleotide-binding domain AV743_03800 PF07171 MlrC C-terminus AV743_03800 PF07364 Metallopeptidase family M81 AV743_03810 PF00528 Binding-protein-dependent transport system inner membrane component AV743_03830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_03840 PF00202 Aminotransferase class-III AV743_03845 PF00392 Bacterial regulatory proteins, gntR family AV743_03845 PF00155 Aminotransferase class I and II AV743_03850 PF00186 Dihydrofolate reductase AV743_03855 PF00303 Thymidylate synthase AV743_03865 PF03232 Ubiquinone biosynthesis protein COQ7 AV743_03870 PF00953 Glycosyl transferase family 4 AV743_03875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AV743_03875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AV743_03875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AV743_03880 PF01370 NAD dependent epimerase/dehydratase family AV743_03885 PF03023 Lipid II flippase MurJ AV743_03890 PF00534 Glycosyl transferases group 1 AV743_03890 PF13439 Glycosyltransferase Family 4 AV743_03895 PF13537 Glutamine amidotransferase domain AV743_03895 PF00733 Asparagine synthase AV743_03900 PF13439 Glycosyltransferase Family 4 AV743_03900 PF00534 Glycosyl transferases group 1 AV743_03905 PF00534 Glycosyl transferases group 1 AV743_03905 PF13439 Glycosyltransferase Family 4 AV743_03910 PF13477 Glycosyl transferase 4-like AV743_03910 PF00534 Glycosyl transferases group 1 AV743_03915 PF00342 Phosphoglucose isomerase AV743_03920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV743_03920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV743_03920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV743_03920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV743_03930 PF01565 FAD binding domain AV743_03930 PF02913 FAD linked oxidases, C-terminal domain AV743_03935 PF00486 Transcriptional regulatory protein, C terminal AV743_03935 PF00072 Response regulator receiver domain AV743_03940 PF00512 His Kinase A (phospho-acceptor) domain AV743_03940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_03940 PF08521 Two-component sensor kinase N-terminal AV743_03945 PF00884 Sulfatase AV743_03955 PF04209 homogentisate 1,2-dioxygenase AV743_03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_03960 PF03466 LysR substrate binding domain AV743_03970 PF01494 FAD binding domain AV743_03980 PF06827 Zinc finger found in FPG and IleRS AV743_03980 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AV743_03980 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AV743_03990 PF03550 Outer membrane lipoprotein LolB AV743_03995 PF00288 GHMP kinases N terminal domain AV743_03995 PF08544 GHMP kinases C terminal AV743_04005 PF14572 Phosphoribosyl synthetase-associated domain AV743_04005 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AV743_04010 PF14693 Ribosomal protein TL5, C-terminal domain AV743_04010 PF01386 Ribosomal L25p family AV743_04015 PF01195 Peptidyl-tRNA hydrolase AV743_04025 PF06071 Protein of unknown function (DUF933) AV743_04025 PF01926 50S ribosome-binding GTPase AV743_04030 PF00589 Phage integrase family AV743_04030 PF13356 Arm DNA-binding domain AV743_04050 PF01555 DNA methylase AV743_04055 PF13175 AAA ATPase domain AV743_04085 PF13361 UvrD-like helicase C-terminal domain AV743_04085 PF00580 UvrD/REP helicase N-terminal domain AV743_04100 PF12951 Passenger-associated-transport-repeat AV743_04110 PF00486 Transcriptional regulatory protein, C terminal AV743_04110 PF00072 Response regulator receiver domain AV743_04125 PF13091 PLD-like domain AV743_04130 PF00005 ABC transporter AV743_04130 PF03459 TOBE domain AV743_04135 PF00528 Binding-protein-dependent transport system inner membrane component AV743_04145 PF00561 alpha/beta hydrolase fold AV743_04185 PF01923 Cobalamin adenosyltransferase AV743_04200 PF00004 ATPase family associated with various cellular activities (AAA) AV743_04200 PF07724 AAA domain (Cdc48 subfamily) AV743_04200 PF10431 C-terminal, D2-small domain, of ClpB protein AV743_04205 PF00227 Proteasome subunit AV743_04210 PF01258 Prokaryotic dksA/traR C4-type zinc finger AV743_04215 PF07683 Cobalamin synthesis protein cobW C-terminal domain AV743_04215 PF02492 CobW/HypB/UreG, nucleotide-binding domain AV743_04220 PF01475 Ferric uptake regulator family AV743_04230 PF00005 ABC transporter AV743_04235 PF00950 ABC 3 transport family AV743_04240 PF01297 Zinc-uptake complex component A periplasmic AV743_04250 PF03824 High-affinity nickel-transport protein AV743_04255 PF07715 TonB-dependent Receptor Plug Domain AV743_04255 PF00593 TonB dependent receptor AV743_04260 PF02899 Phage integrase, N-terminal SAM-like domain AV743_04260 PF00589 Phage integrase family AV743_04270 PF01678 Diaminopimelate epimerase AV743_04275 PF03279 Bacterial lipid A biosynthesis acyltransferase AV743_04285 PF00438 S-adenosylmethionine synthetase, N-terminal domain AV743_04285 PF02772 S-adenosylmethionine synthetase, central domain AV743_04285 PF02773 S-adenosylmethionine synthetase, C-terminal domain AV743_04295 PF00534 Glycosyl transferases group 1 AV743_04295 PF13439 Glycosyltransferase Family 4 AV743_04300 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AV743_04300 PF05221 S-adenosyl-L-homocysteine hydrolase AV743_04305 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AV743_04310 PF02219 Methylenetetrahydrofolate reductase AV743_04325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_04325 PF03466 LysR substrate binding domain AV743_04330 PF00850 Histone deacetylase domain AV743_04335 PF00083 Sugar (and other) transporter AV743_04335 PF07690 Major Facilitator Superfamily AV743_04345 PF14718 Soluble lytic murein transglycosylase L domain AV743_04345 PF01464 Transglycosylase SLT domain AV743_04350 PF01743 Poly A polymerase head domain AV743_04350 PF12627 Probable RNA and SrmB- binding site of polymerase A AV743_04360 PF00271 Helicase conserved C-terminal domain AV743_04360 PF00270 DEAD/DEAH box helicase AV743_04365 PF03167 Uracil DNA glycosylase superfamily AV743_04385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV743_04385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV743_04395 PF01970 Tripartite tricarboxylate transporter TctA family AV743_04420 PF01790 Prolipoprotein diacylglyceryl transferase AV743_04425 PF00920 Dehydratase family AV743_04430 PF00034 Cytochrome c AV743_04435 PF01625 Peptide methionine sulfoxide reductase AV743_04440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV743_04445 PF01037 Lrp/AsnC ligand binding domain AV743_04485 PF07687 Peptidase dimerisation domain AV743_04485 PF01546 Peptidase family M20/M25/M40 AV743_04490 PF01979 Amidohydrolase family AV743_04505 PF02381 MraZ protein, putative antitoxin-like AV743_04510 PF01795 MraW methylase family AV743_04515 PF04999 Cell division protein FtsL AV743_04520 PF03717 Penicillin-binding Protein dimerisation domain AV743_04520 PF00905 Penicillin binding protein transpeptidase domain AV743_04525 PF08245 Mur ligase middle domain AV743_04525 PF02875 Mur ligase family, glutamate ligase domain AV743_04530 PF00953 Glycosyl transferase family 4 AV743_04535 PF08245 Mur ligase middle domain AV743_04535 PF02875 Mur ligase family, glutamate ligase domain AV743_04540 PF01098 Cell cycle protein AV743_04545 PF04101 Glycosyltransferase family 28 C-terminal domain AV743_04545 PF03033 Glycosyltransferase family 28 N-terminal domain AV743_04550 PF08245 Mur ligase middle domain AV743_04550 PF01225 Mur ligase family, catalytic domain AV743_04550 PF02875 Mur ligase family, glutamate ligase domain AV743_04555 PF07478 D-ala D-ala ligase C-terminus AV743_04555 PF01820 D-ala D-ala ligase N-terminus AV743_04560 PF03799 Cell division protein FtsQ AV743_04560 PF08478 POTRA domain, FtsQ-type AV743_04565 PF02491 SHS2 domain inserted in FTSA AV743_04570 PF00091 Tubulin/FtsZ family, GTPase domain AV743_04570 PF12327 FtsZ family, C-terminal domain AV743_04575 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AV743_04585 PF08525 Opacity-associated protein A N-terminal motif AV743_04585 PF01476 LysM domain AV743_04585 PF01551 Peptidase family M23 AV743_04590 PF02810 SEC-C motif AV743_04590 PF07517 SecA DEAD-like domain AV743_04590 PF01043 SecA preprotein cross-linking domain AV743_04590 PF07516 SecA Wing and Scaffold domain AV743_04600 PF03401 Tripartite tricarboxylate transporter family receptor AV743_04615 PF01266 FAD dependent oxidoreductase AV743_04620 PF01037 Lrp/AsnC ligand binding domain AV743_04630 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AV743_04645 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AV743_04645 PF01488 Shikimate / quinate 5-dehydrogenase AV743_04645 PF08501 Shikimate dehydrogenase substrate binding domain AV743_04655 PF00773 RNB domain AV743_04660 PF05728 Uncharacterised protein family (UPF0227) AV743_04665 PF01225 Mur ligase family, catalytic domain AV743_04665 PF02875 Mur ligase family, glutamate ligase domain AV743_04665 PF08245 Mur ligase middle domain AV743_04670 PF08534 Redoxin AV743_04675 PF01220 Dehydroquinase class II AV743_04680 PF00364 Biotin-requiring enzyme AV743_04685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV743_04685 PF00289 Biotin carboxylase, N-terminal domain AV743_04685 PF02785 Biotin carboxylase C-terminal domain AV743_04700 PF00294 pfkB family carbohydrate kinase AV743_04725 PF03062 MBOAT, membrane-bound O-acyltransferase family AV743_04730 PF13193 AMP-binding enzyme C-terminal domain AV743_04730 PF00501 AMP-binding enzyme AV743_04745 PF00268 Ribonucleotide reductase, small chain AV743_04750 PF00317 Ribonucleotide reductase, all-alpha domain AV743_04750 PF02867 Ribonucleotide reductase, barrel domain AV743_04750 PF03477 ATP cone domain AV743_04765 PF01037 Lrp/AsnC ligand binding domain AV743_04780 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV743_04785 PF00583 Acetyltransferase (GNAT) family AV743_04785 PF13380 CoA binding domain AV743_04785 PF13607 Succinyl-CoA ligase like flavodoxin domain AV743_04800 PF07729 FCD domain AV743_04800 PF00392 Bacterial regulatory proteins, gntR family AV743_04810 PF03880 DbpA RNA binding domain AV743_04810 PF00270 DEAD/DEAH box helicase AV743_04810 PF00271 Helicase conserved C-terminal domain AV743_04815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV743_04820 PF00857 Isochorismatase family AV743_04825 PF00528 Binding-protein-dependent transport system inner membrane component AV743_04830 PF00005 ABC transporter AV743_04840 PF02230 Phospholipase/Carboxylesterase AV743_04845 PF04751 Protein of unknown function (DUF615) AV743_04850 PF01523 Putative modulator of DNA gyrase AV743_04855 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_04860 PF00572 Ribosomal protein L13 AV743_04865 PF00380 Ribosomal protein S9/S16 AV743_04870 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV743_04870 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV743_04880 PF01521 Iron-sulphur cluster biosynthesis AV743_04885 PF03702 Anhydro-N-acetylmuramic acid kinase AV743_04890 PF08460 Bacterial SH3 domain AV743_04890 PF01551 Peptidase family M23 AV743_04900 PF01479 S4 domain AV743_04900 PF00579 tRNA synthetases class I (W and Y) AV743_04910 PF00464 Serine hydroxymethyltransferase AV743_04915 PF03477 ATP cone domain AV743_04930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV743_04930 PF01872 RibD C-terminal domain AV743_04950 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_04950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_04950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_04950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_04950 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_04950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_04960 PF03401 Tripartite tricarboxylate transporter family receptor AV743_04965 PF03466 LysR substrate binding domain AV743_04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_04970 PF02515 CoA-transferase family III AV743_04990 PF05726 Pirin C-terminal cupin domain AV743_04990 PF02678 Pirin AV743_05005 PF00072 Response regulator receiver domain AV743_05010 PF06481 COX Aromatic Rich Motif AV743_05010 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AV743_05015 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV743_05020 PF00510 Cytochrome c oxidase subunit III AV743_05025 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AV743_05030 PF01022 Bacterial regulatory protein, arsR family AV743_05035 PF07690 Major Facilitator Superfamily AV743_05050 PF05114 Protein of unknown function (DUF692) AV743_05065 PF00593 TonB dependent receptor AV743_05065 PF07715 TonB-dependent Receptor Plug Domain AV743_05080 PF01551 Peptidase family M23 AV743_05080 PF01476 LysM domain AV743_05095 PF04461 Protein of unknown function (DUF520) AV743_05105 PF08281 Sigma-70, region 4 AV743_05105 PF04542 Sigma-70 region 2 AV743_05125 PF00795 Carbon-nitrogen hydrolase AV743_05130 PF01523 Putative modulator of DNA gyrase AV743_05135 PF00793 DAHP synthetase I family AV743_05140 PF13332 Hemagglutinin repeat AV743_05140 PF13018 Extended Signal Peptide of Type V secretion system AV743_05140 PF05860 haemagglutination activity domain AV743_05140 PF05594 Haemagluttinin repeat AV743_05140 PF05594 Haemagluttinin repeat AV743_05140 PF13018 Extended Signal Peptide of Type V secretion system AV743_05140 PF05860 haemagglutination activity domain AV743_05140 PF13332 Hemagglutinin repeat AV743_05145 PF01565 FAD binding domain AV743_05145 PF02913 FAD linked oxidases, C-terminal domain AV743_05150 PF02913 FAD linked oxidases, C-terminal domain AV743_05150 PF01565 FAD binding domain AV743_05155 PF01565 FAD binding domain AV743_05160 PF13183 4Fe-4S dicluster domain AV743_05160 PF02754 Cysteine-rich domain AV743_05165 PF00756 Putative esterase AV743_05170 PF07715 TonB-dependent Receptor Plug Domain AV743_05170 PF00593 TonB dependent receptor AV743_05180 PF02233 NAD(P) transhydrogenase beta subunit AV743_05185 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AV743_05195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV743_05195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV743_05205 PF03401 Tripartite tricarboxylate transporter family receptor AV743_05210 PF03466 LysR substrate binding domain AV743_05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_05220 PF01925 Sulfite exporter TauE/SafE AV743_05225 PF00043 Glutathione S-transferase, C-terminal domain AV743_05225 PF13417 Glutathione S-transferase, N-terminal domain AV743_05230 PF00206 Lyase AV743_05230 PF08328 Adenylosuccinate lyase C-terminal AV743_05235 PF01322 Cytochrome C' AV743_05255 PF01594 AI-2E family transporter AV743_05265 PF07729 FCD domain AV743_05265 PF00392 Bacterial regulatory proteins, gntR family AV743_05275 PF01425 Amidase AV743_05280 PF02515 CoA-transferase family III AV743_05285 PF00378 Enoyl-CoA hydratase/isomerase AV743_05300 PF00528 Binding-protein-dependent transport system inner membrane component AV743_05305 PF00005 ABC transporter AV743_05320 PF01614 Bacterial transcriptional regulator AV743_05320 PF09339 IclR helix-turn-helix domain AV743_05330 PF00501 AMP-binding enzyme AV743_05330 PF13193 AMP-binding enzyme C-terminal domain AV743_05335 PF01042 Endoribonuclease L-PSP AV743_05340 PF02653 Branched-chain amino acid transport system / permease component AV743_05355 PF00005 ABC transporter AV743_05375 PF03466 LysR substrate binding domain AV743_05375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_05385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV743_05390 PF07690 Major Facilitator Superfamily AV743_05395 PF03466 LysR substrate binding domain AV743_05395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_05410 PF01425 Amidase AV743_05415 PF00677 Lumazine binding domain AV743_05420 PF03401 Tripartite tricarboxylate transporter family receptor AV743_05425 PF01037 Lrp/AsnC ligand binding domain AV743_05425 PF13404 AsnC-type helix-turn-helix domain AV743_05435 PF00501 AMP-binding enzyme AV743_05435 PF13193 AMP-binding enzyme C-terminal domain AV743_05445 PF00528 Binding-protein-dependent transport system inner membrane component AV743_05450 PF00005 ABC transporter AV743_05465 PF00107 Zinc-binding dehydrogenase AV743_05465 PF08240 Alcohol dehydrogenase GroES-like domain AV743_05485 PF00403 Heavy-metal-associated domain AV743_05490 PF01966 HD domain AV743_05495 PF00155 Aminotransferase class I and II AV743_05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_05500 PF03466 LysR substrate binding domain AV743_05510 PF00083 Sugar (and other) transporter AV743_05530 PF13609 Gram-negative porin AV743_05535 PF02548 Ketopantoate hydroxymethyltransferase AV743_05540 PF03466 LysR substrate binding domain AV743_05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_05605 PF00440 Bacterial regulatory proteins, tetR family AV743_05610 PF05170 AsmA family AV743_05615 PF03352 Methyladenine glycosylase AV743_05620 PF00376 MerR family regulatory protein AV743_05620 PF09278 MerR, DNA binding AV743_05635 PF01547 Bacterial extracellular solute-binding protein AV743_05650 PF00005 ABC transporter AV743_05650 PF08402 TOBE domain AV743_05655 PF00528 Binding-protein-dependent transport system inner membrane component AV743_05660 PF14785 Maltose transport system permease protein MalF P2 domain AV743_05660 PF00528 Binding-protein-dependent transport system inner membrane component AV743_05675 PF03401 Tripartite tricarboxylate transporter family receptor AV743_05680 PF00392 Bacterial regulatory proteins, gntR family AV743_05680 PF07729 FCD domain AV743_05710 PF00465 Iron-containing alcohol dehydrogenase AV743_05725 PF03180 NLPA lipoprotein AV743_05730 PF00528 Binding-protein-dependent transport system inner membrane component AV743_05735 PF00005 ABC transporter AV743_05735 PF09383 NIL domain AV743_05740 PF01055 Glycosyl hydrolases family 31 AV743_05740 PF13802 Galactose mutarotase-like AV743_05750 PF00459 Inositol monophosphatase family AV743_05765 PF00501 AMP-binding enzyme AV743_05765 PF13193 AMP-binding enzyme C-terminal domain AV743_05770 PF01546 Peptidase family M20/M25/M40 AV743_05770 PF07687 Peptidase dimerisation domain AV743_05775 PF03466 LysR substrate binding domain AV743_05775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_05780 PF03601 Conserved hypothetical protein 698 AV743_05785 PF03061 Thioesterase superfamily AV743_05790 PF03448 MgtE intracellular N domain AV743_05790 PF00571 CBS domain AV743_05790 PF01769 Divalent cation transporter AV743_05810 PF03401 Tripartite tricarboxylate transporter family receptor AV743_05820 PF02609 Exonuclease VII small subunit AV743_05825 PF00348 Polyprenyl synthetase AV743_05830 PF02779 Transketolase, pyrimidine binding domain AV743_05830 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AV743_05830 PF02780 Transketolase, C-terminal domain AV743_05835 PF02649 Type I GTP cyclohydrolase folE2 AV743_05840 PF01250 Ribosomal protein S6 AV743_05850 PF01084 Ribosomal protein S18 AV743_05855 PF01281 Ribosomal protein L9, N-terminal domain AV743_05855 PF03948 Ribosomal protein L9, C-terminal domain AV743_05865 PF03796 DnaB-like helicase C terminal domain AV743_05865 PF00772 DnaB-like helicase N terminal domain AV743_05870 PF13593 SBF-like CPA transporter family (DUF4137) AV743_05875 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AV743_05880 PF13638 PIN domain AV743_05880 PF02562 PhoH-like protein AV743_05885 PF00578 AhpC/TSA family AV743_05890 PF04430 Protein of unknown function (DUF498/DUF598) AV743_05895 PF00155 Aminotransferase class I and II AV743_05900 PF03447 Homoserine dehydrogenase, NAD binding domain AV743_05900 PF01842 ACT domain AV743_05900 PF00742 Homoserine dehydrogenase AV743_05905 PF14821 Threonine synthase N terminus AV743_05905 PF00291 Pyridoxal-phosphate dependent enzyme AV743_05920 PF02615 Malate/L-lactate dehydrogenase AV743_05945 PF03328 HpcH/HpaI aldolase/citrate lyase family AV743_05950 PF01649 Ribosomal protein S20 AV743_05960 PF03023 Lipid II flippase MurJ AV743_05965 PF00106 short chain dehydrogenase AV743_05970 PF05191 Adenylate kinase, active site lid AV743_05975 PF02348 Cytidylyltransferase AV743_05980 PF03966 Trm112p-like protein AV743_05985 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AV743_05990 PF02472 Biopolymer transport protein ExbD/TolR AV743_05995 PF01618 MotA/TolQ/ExbB proton channel family AV743_06005 PF13742 OB-fold nucleic acid binding domain AV743_06005 PF02601 Exonuclease VII, large subunit AV743_06010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AV743_06010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AV743_06015 PF00654 Voltage gated chloride channel AV743_06020 PF00108 Thiolase, N-terminal domain AV743_06020 PF02803 Thiolase, C-terminal domain AV743_06030 PF00313 'Cold-shock' DNA-binding domain AV743_06035 PF02617 ATP-dependent Clp protease adaptor protein ClpS AV743_06040 PF07703 Alpha-2-macroglobulin bait region domain AV743_06040 PF17962 Bacterial macroglobulin domain 6 AV743_06040 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AV743_06040 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AV743_06040 PF00207 Alpha-2-macroglobulin family AV743_06040 PF01835 MG2 domain AV743_06040 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AV743_06040 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AV743_06045 PF00912 Transglycosylase AV743_06045 PF06832 Penicillin-Binding Protein C-terminus Family AV743_06045 PF00905 Penicillin binding protein transpeptidase domain AV743_06050 PF00004 ATPase family associated with various cellular activities (AAA) AV743_06050 PF02861 Clp amino terminal domain, pathogenicity island component AV743_06050 PF10431 C-terminal, D2-small domain, of ClpB protein AV743_06050 PF17871 AAA lid domain AV743_06050 PF07724 AAA domain (Cdc48 subfamily) AV743_06055 PF04403 Paraquat-inducible protein A AV743_06060 PF02470 MlaD protein AV743_06070 PF00171 Aldehyde dehydrogenase family AV743_06070 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AV743_06070 PF14850 DNA-binding domain of Proline dehydrogenase AV743_06070 PF01619 Proline dehydrogenase AV743_06080 PF13458 Periplasmic binding protein AV743_06085 PF02653 Branched-chain amino acid transport system / permease component AV743_06090 PF02653 Branched-chain amino acid transport system / permease component AV743_06090 PF11862 Domain of unknown function (DUF3382) AV743_06095 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_06095 PF00005 ABC transporter AV743_06100 PF00005 ABC transporter AV743_06105 PF07690 Major Facilitator Superfamily AV743_06110 PF00440 Bacterial regulatory proteins, tetR family AV743_06120 PF03212 Pertactin AV743_06120 PF03797 Autotransporter beta-domain AV743_06130 PF00543 Nitrogen regulatory protein P-II AV743_06135 PF04380 Membrane fusogenic activity AV743_06155 PF00083 Sugar (and other) transporter AV743_06155 PF07690 Major Facilitator Superfamily AV743_06165 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV743_06170 PF00510 Cytochrome c oxidase subunit III AV743_06175 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AV743_06180 PF02104 SURF1 family AV743_06205 PF04055 Radical SAM superfamily AV743_06205 PF06463 Molybdenum Cofactor Synthesis C AV743_06210 PF03454 MoeA C-terminal region (domain IV) AV743_06210 PF00994 Probable molybdopterin binding domain AV743_06210 PF03453 MoeA N-terminal region (domain I and II) AV743_06215 PF00994 Probable molybdopterin binding domain AV743_06220 PF02391 MoaE protein AV743_06230 PF01967 MoaC family AV743_06240 PF01738 Dienelactone hydrolase family AV743_06250 PF08534 Redoxin AV743_06265 PF06968 Biotin and Thiamin Synthesis associated domain AV743_06265 PF04055 Radical SAM superfamily AV743_06285 PF00403 Heavy-metal-associated domain AV743_06290 PF13411 MerR HTH family regulatory protein AV743_06305 PF03797 Autotransporter beta-domain AV743_06305 PF03212 Pertactin AV743_06320 PF09370 Phosphoenolpyruvate hydrolase-like AV743_06330 PF03466 LysR substrate binding domain AV743_06330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_06335 PF07969 Amidohydrolase family AV743_06345 PF00175 Oxidoreductase NAD-binding domain AV743_06345 PF00667 FAD binding domain AV743_06345 PF00258 Flavodoxin AV743_06350 PF02424 ApbE family AV743_06370 PF00005 ABC transporter AV743_06375 PF01061 ABC-2 type transporter AV743_06385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AV743_06390 PF01593 Flavin containing amine oxidoreductase AV743_06390 PF01593 Flavin containing amine oxidoreductase AV743_06405 PF00842 Alanine racemase, C-terminal domain AV743_06405 PF01168 Alanine racemase, N-terminal domain AV743_06425 PF04542 Sigma-70 region 2 AV743_06425 PF04545 Sigma-70, region 4 AV743_06430 PF00092 von Willebrand factor type A domain AV743_06430 PF12450 von Willebrand factor AV743_06430 PF12034 Domain of unknown function (DUF3520) AV743_06435 PF18073 Rubredoxin metal binding domain AV743_06450 PF01554 MatE AV743_06460 PF01197 Ribosomal protein L31 AV743_06465 PF03301 Tryptophan 2,3-dioxygenase AV743_06470 PF04199 Putative cyclase AV743_06475 PF04002 RadC-like JAB domain AV743_06480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV743_06485 PF02401 LytB protein AV743_06490 PF14497 Glutathione S-transferase, C-terminal domain AV743_06490 PF02798 Glutathione S-transferase, N-terminal domain AV743_06510 PF02492 CobW/HypB/UreG, nucleotide-binding domain AV743_06510 PF07683 Cobalamin synthesis protein cobW C-terminal domain AV743_06520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_06520 PF03466 LysR substrate binding domain AV743_06530 PF04079 Segregation and condensation complex subunit ScpB AV743_06535 PF01479 S4 domain AV743_06535 PF00849 RNA pseudouridylate synthase AV743_06540 PF17384 RimP C-terminal SH3 domain AV743_06540 PF02576 RimP N-terminal domain AV743_06545 PF13184 NusA-like KH domain AV743_06545 PF08529 NusA N-terminal domain AV743_06550 PF04760 Translation initiation factor IF-2, N-terminal region AV743_06550 PF08364 Bacterial translation initiation factor IF-2 associated region AV743_06550 PF11987 Translation-initiation factor 2 AV743_06550 PF00009 Elongation factor Tu GTP binding domain AV743_06555 PF02033 Ribosome-binding factor A AV743_06560 PF01509 TruB family pseudouridylate synthase (N terminal domain) AV743_06560 PF16198 tRNA pseudouridylate synthase B C-terminal domain AV743_06580 PF03641 Possible lysine decarboxylase AV743_06585 PF00476 DNA polymerase family A AV743_06585 PF01612 3'-5' exonuclease AV743_06585 PF01367 5'-3' exonuclease, C-terminal SAM fold AV743_06585 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AV743_06595 PF01738 Dienelactone hydrolase family AV743_06600 PF02690 Na+/Pi-cotransporter AV743_06605 PF03313 Serine dehydratase alpha chain AV743_06605 PF03315 Serine dehydratase beta chain AV743_06610 PF02677 Epoxyqueuosine reductase QueH AV743_06615 PF03710 Glutamate-ammonia ligase adenylyltransferase AV743_06615 PF08335 GlnD PII-uridylyltransferase AV743_06625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV743_06625 PF07498 Rho termination factor, N-terminal domain AV743_06625 PF07497 Rho termination factor, RNA-binding domain AV743_06630 PF00085 Thioredoxin AV743_06635 PF00204 DNA gyrase B AV743_06635 PF01751 Toprim domain AV743_06635 PF00986 DNA gyrase B subunit, carboxyl terminus AV743_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_06645 PF00521 DNA gyrase/topoisomerase IV, subunit A AV743_06650 PF04235 Protein of unknown function (DUF418) AV743_06665 PF13458 Periplasmic binding protein AV743_06670 PF17912 MalK OB fold domain AV743_06670 PF00005 ABC transporter AV743_06675 PF00528 Binding-protein-dependent transport system inner membrane component AV743_06680 PF00528 Binding-protein-dependent transport system inner membrane component AV743_06685 PF13416 Bacterial extracellular solute-binding protein AV743_06690 PF14748 Pyrroline-5-carboxylate reductase dimerisation AV743_06690 PF03807 NADP oxidoreductase coenzyme F420-dependent AV743_06695 PF02592 Putative vitamin uptake transporter AV743_06705 PF13458 Periplasmic binding protein AV743_06710 PF02653 Branched-chain amino acid transport system / permease component AV743_06715 PF02653 Branched-chain amino acid transport system / permease component AV743_06715 PF11862 Domain of unknown function (DUF3382) AV743_06720 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_06720 PF00005 ABC transporter AV743_06725 PF00005 ABC transporter AV743_06730 PF01177 Asp/Glu/Hydantoin racemase AV743_06760 PF04241 Protein of unknown function (DUF423) AV743_06775 PF03180 NLPA lipoprotein AV743_06780 PF01070 FMN-dependent dehydrogenase AV743_06785 PF02666 Phosphatidylserine decarboxylase AV743_06800 PF10437 Bacterial lipoate protein ligase C-terminus AV743_06800 PF03099 Biotin/lipoate A/B protein ligase family AV743_06815 PF02798 Glutathione S-transferase, N-terminal domain AV743_06815 PF00043 Glutathione S-transferase, C-terminal domain AV743_06820 PF00255 Glutathione peroxidase AV743_06840 PF02515 CoA-transferase family III AV743_06845 PF03960 ArsC family AV743_06850 PF00578 AhpC/TSA family AV743_06870 PF07681 DoxX AV743_06885 PF00248 Aldo/keto reductase family AV743_06890 PF00582 Universal stress protein family AV743_06905 PF00392 Bacterial regulatory proteins, gntR family AV743_06905 PF00155 Aminotransferase class I and II AV743_06910 PF01168 Alanine racemase, N-terminal domain AV743_06915 PF08543 Phosphomethylpyrimidine kinase AV743_06925 PF00128 Alpha amylase, catalytic domain AV743_06935 PF00128 Alpha amylase, catalytic domain AV743_06935 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AV743_06935 PF11941 Domain of unknown function (DUF3459) AV743_06940 PF00128 Alpha amylase, catalytic domain AV743_06940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AV743_06945 PF00128 Alpha amylase, catalytic domain AV743_06945 PF02806 Alpha amylase, C-terminal all-beta domain AV743_06945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AV743_06950 PF16657 Maltogenic Amylase, C-terminal domain AV743_06950 PF00128 Alpha amylase, catalytic domain AV743_06995 PF13361 UvrD-like helicase C-terminal domain AV743_06995 PF00580 UvrD/REP helicase N-terminal domain AV743_07000 PF01544 CorA-like Mg2+ transporter protein AV743_07010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_07015 PF00528 Binding-protein-dependent transport system inner membrane component AV743_07020 PF00528 Binding-protein-dependent transport system inner membrane component AV743_07020 PF12911 N-terminal TM domain of oligopeptide transport permease C AV743_07025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_07025 PF00005 ABC transporter AV743_07030 PF01047 MarR family AV743_07040 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AV743_07040 PF08479 POTRA domain, ShlB-type AV743_07045 PF03707 Bacterial signalling protein N terminal repeat AV743_07045 PF00990 Diguanylate cyclase, GGDEF domain AV743_07045 PF00563 EAL domain AV743_07075 PF04972 BON domain AV743_07075 PF13629 Pilus formation protein N terminal region AV743_07075 PF00263 Bacterial type II and III secretion system protein AV743_07115 PF00072 Response regulator receiver domain AV743_07115 PF02954 Bacterial regulatory protein, Fis family AV743_07115 PF00158 Sigma-54 interaction domain AV743_07130 PF08281 Sigma-70, region 4 AV743_07130 PF04542 Sigma-70 region 2 AV743_07140 PF00034 Cytochrome c AV743_07145 PF09285 Elongation factor P, C-terminal AV743_07145 PF01132 Elongation factor P (EF-P) OB domain AV743_07145 PF08207 Elongation factor P (EF-P) KOW-like domain AV743_07160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AV743_07165 PF00330 Aconitase family (aconitate hydratase) AV743_07165 PF00694 Aconitase C-terminal domain AV743_07175 PF00593 TonB dependent receptor AV743_07175 PF07715 TonB-dependent Receptor Plug Domain AV743_07190 PF00691 OmpA family AV743_07200 PF11791 Aconitate B N-terminal domain AV743_07200 PF00330 Aconitase family (aconitate hydratase) AV743_07200 PF06434 Aconitate hydratase 2 N-terminus AV743_07225 PF00892 EamA-like transporter family AV743_07230 PF01925 Sulfite exporter TauE/SafE AV743_07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_07250 PF03466 LysR substrate binding domain AV743_07255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AV743_07255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AV743_07265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_07265 PF03466 LysR substrate binding domain AV743_07300 PF03797 Autotransporter beta-domain AV743_07300 PF03212 Pertactin AV743_07305 PF02545 Maf-like protein AV743_07310 PF02590 Predicted SPOUT methyltransferase AV743_07320 PF01467 Cytidylyltransferase-like AV743_07325 PF01218 Coproporphyrinogen III oxidase AV743_07330 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AV743_07330 PF02843 Phosphoribosylglycinamide synthetase, C domain AV743_07330 PF02844 Phosphoribosylglycinamide synthetase, N domain AV743_07335 PF01709 Transcriptional regulator AV743_07340 PF05872 Bacterial protein of unknown function (DUF853) AV743_07345 PF01235 Sodium:alanine symporter family AV743_07350 PF00202 Aminotransferase class-III AV743_07355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV743_07360 PF00171 Aldehyde dehydrogenase family AV743_07370 PF01546 Peptidase family M20/M25/M40 AV743_07370 PF07687 Peptidase dimerisation domain AV743_07375 PF00850 Histone deacetylase domain AV743_07380 PF07883 Cupin domain AV743_07385 PF00202 Aminotransferase class-III AV743_07395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_07395 PF00005 ABC transporter AV743_07400 PF12911 N-terminal TM domain of oligopeptide transport permease C AV743_07400 PF00528 Binding-protein-dependent transport system inner membrane component AV743_07405 PF00528 Binding-protein-dependent transport system inner membrane component AV743_07410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_07415 PF00392 Bacterial regulatory proteins, gntR family AV743_07415 PF00155 Aminotransferase class I and II AV743_07420 PF00180 Isocitrate/isopropylmalate dehydrogenase AV743_07425 PF07690 Major Facilitator Superfamily AV743_07430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV743_07430 PF00529 HlyD membrane-fusion protein of T1SS AV743_07440 PF01047 MarR family AV743_07450 PF00892 EamA-like transporter family AV743_07455 PF08240 Alcohol dehydrogenase GroES-like domain AV743_07455 PF00107 Zinc-binding dehydrogenase AV743_07460 PF01435 Peptidase family M48 AV743_07470 PF00581 Rhodanese-like domain AV743_07480 PF03466 LysR substrate binding domain AV743_07480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_07485 PF00005 ABC transporter AV743_07485 PF08402 TOBE domain AV743_07490 PF00528 Binding-protein-dependent transport system inner membrane component AV743_07495 PF13419 Haloacid dehalogenase-like hydrolase AV743_07530 PF00860 Permease family AV743_07535 PF00672 HAMP domain AV743_07535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_07535 PF02203 Tar ligand binding domain homologue AV743_07540 PF03449 Transcription elongation factor, N-terminal AV743_07540 PF01272 Transcription elongation factor, GreA/GreB, C-term AV743_07570 PF00771 FHIPEP family AV743_07635 PF01514 Secretory protein of YscJ/FliF family AV743_07645 PF02108 Flagellar assembly protein FliH AV743_07650 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV743_07650 PF18269 T3SS EscN ATPase C-terminal domain AV743_07650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV743_07665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV743_07670 PF00813 FliP family AV743_07675 PF01313 Bacterial export proteins, family 3 AV743_07680 PF01311 Bacterial export proteins, family 1 AV743_07685 PF01312 FlhB HrpN YscU SpaS Family AV743_07700 PF08281 Sigma-70, region 4 AV743_07700 PF04542 Sigma-70 region 2 AV743_07720 PF00672 HAMP domain AV743_07720 PF07228 Stage II sporulation protein E (SpoIIE) AV743_07730 PF01168 Alanine racemase, N-terminal domain AV743_07730 PF00842 Alanine racemase, C-terminal domain AV743_07735 PF13581 Histidine kinase-like ATPase domain AV743_07740 PF01740 STAS domain AV743_07745 PF13396 Phospholipase_D-nuclease N-terminal AV743_07745 PF13091 PLD-like domain AV743_07755 PF03797 Autotransporter beta-domain AV743_07775 PF16868 NMT1-like family AV743_07780 PF00202 Aminotransferase class-III AV743_07790 PF12802 MarR family AV743_07795 PF00583 Acetyltransferase (GNAT) family AV743_07810 PF00175 Oxidoreductase NAD-binding domain AV743_07810 PF00970 Oxidoreductase FAD-binding domain AV743_07810 PF00042 Globin AV743_07815 PF02082 Transcriptional regulator AV743_07820 PF01266 FAD dependent oxidoreductase AV743_07835 PF01571 Aminomethyltransferase folate-binding domain AV743_07840 PF02618 YceG-like family AV743_07845 PF02223 Thymidylate kinase AV743_07850 PF12169 DNA polymerase III subunits gamma and tau domain III AV743_07855 PF01026 TatD related DNase AV743_07870 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_07880 PF00005 ABC transporter AV743_07890 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV743_07890 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AV743_07900 PF07687 Peptidase dimerisation domain AV743_07900 PF01546 Peptidase family M20/M25/M40 AV743_07905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_07905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_07905 PF00205 Thiamine pyrophosphate enzyme, central domain AV743_07915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV743_07925 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AV743_07925 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_07930 PF00392 Bacterial regulatory proteins, gntR family AV743_07930 PF07729 FCD domain AV743_07970 PF01425 Amidase AV743_07975 PF07286 Protein of unknown function (DUF1445) AV743_07985 PF00072 Response regulator receiver domain AV743_07985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_07985 PF00989 PAS fold AV743_07985 PF01627 Hpt domain AV743_07985 PF00512 His Kinase A (phospho-acceptor) domain AV743_07985 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_07990 PF00196 Bacterial regulatory proteins, luxR family AV743_07990 PF00072 Response regulator receiver domain AV743_08015 PF16970 Type-1 fimbrial protein, A AV743_08020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AV743_08020 PF02753 Pili assembly chaperone PapD, C-terminal domain AV743_08025 PF00577 Outer membrane usher protein AV743_08025 PF13954 PapC N-terminal domain AV743_08025 PF13953 PapC C-terminal domain AV743_08030 PF00419 Fimbrial protein AV743_08035 PF17287 POTRA domain AV743_08035 PF08479 POTRA domain, ShlB-type AV743_08035 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AV743_08050 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_08085 PF05378 Hydantoinase/oxoprolinase N-terminal region AV743_08085 PF01968 Hydantoinase/oxoprolinase AV743_08110 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_08115 PF00528 Binding-protein-dependent transport system inner membrane component AV743_08120 PF00005 ABC transporter AV743_08125 PF04607 Region found in RelA / SpoT proteins AV743_08125 PF13291 ACT domain AV743_08125 PF02824 TGS domain AV743_08130 PF01192 RNA polymerase Rpb6 AV743_08135 PF00625 Guanylate kinase AV743_08140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV743_08145 PF00034 Cytochrome c AV743_08155 PF00877 NlpC/P60 family AV743_08160 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AV743_08160 PF01048 Phosphorylase superfamily AV743_08180 PF03755 YicC-like family, N-terminal region AV743_08180 PF08340 Domain of unknown function (DUF1732) AV743_08185 PF01138 3' exoribonuclease family, domain 1 AV743_08185 PF03725 3' exoribonuclease family, domain 2 AV743_08195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_08195 PF03466 LysR substrate binding domain AV743_08200 PF02203 Tar ligand binding domain homologue AV743_08200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_08200 PF00672 HAMP domain AV743_08205 PF00990 Diguanylate cyclase, GGDEF domain AV743_08205 PF17154 Gammaproteobacterial periplasmic sensor domain AV743_08205 PF00563 EAL domain AV743_08205 PF00672 HAMP domain AV743_08210 PF01725 Ham1 family AV743_08225 PF04055 Radical SAM superfamily AV743_08225 PF06969 HemN C-terminal domain AV743_08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_08235 PF00512 His Kinase A (phospho-acceptor) domain AV743_08235 PF00989 PAS fold AV743_08240 PF02954 Bacterial regulatory protein, Fis family AV743_08240 PF00072 Response regulator receiver domain AV743_08240 PF00158 Sigma-54 interaction domain AV743_08245 PF03466 LysR substrate binding domain AV743_08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_08250 PF17954 Quercetinase C-terminal cupin domain AV743_08250 PF02678 Pirin AV743_08255 PF05726 Pirin C-terminal cupin domain AV743_08255 PF02678 Pirin AV743_08260 PF08402 TOBE domain AV743_08260 PF00005 ABC transporter AV743_08265 PF00528 Binding-protein-dependent transport system inner membrane component AV743_08275 PF00970 Oxidoreductase FAD-binding domain AV743_08275 PF00175 Oxidoreductase NAD-binding domain AV743_08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_08280 PF03466 LysR substrate binding domain AV743_08290 PF00248 Aldo/keto reductase family AV743_08300 PF01042 Endoribonuclease L-PSP AV743_08305 PF00271 Helicase conserved C-terminal domain AV743_08305 PF17191 RecG wedge domain AV743_08305 PF00270 DEAD/DEAH box helicase AV743_08310 PF03466 LysR substrate binding domain AV743_08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_08315 PF03466 LysR substrate binding domain AV743_08315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_08320 PF00171 Aldehyde dehydrogenase family AV743_08325 PF00210 Ferritin-like domain AV743_08345 PF00535 Glycosyl transferase family 2 AV743_08355 PF00005 ABC transporter AV743_08365 PF00534 Glycosyl transferases group 1 AV743_08375 PF02563 Polysaccharide biosynthesis/export protein AV743_08380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AV743_08380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AV743_08380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AV743_08385 PF01370 NAD dependent epimerase/dehydratase family AV743_08390 PF05159 Capsule polysaccharide biosynthesis protein AV743_08395 PF05159 Capsule polysaccharide biosynthesis protein AV743_08400 PF00106 short chain dehydrogenase AV743_08425 PF00005 ABC transporter AV743_08430 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_08430 PF00005 ABC transporter AV743_08445 PF03741 Integral membrane protein TerC family AV743_08455 PF03401 Tripartite tricarboxylate transporter family receptor AV743_08470 PF17863 AAA lid domain AV743_08470 PF07726 ATPase family associated with various cellular activities (AAA) AV743_08505 PF00884 Sulfatase AV743_08525 PF03358 NADPH-dependent FMN reductase AV743_08550 PF03401 Tripartite tricarboxylate transporter family receptor AV743_08560 PF03466 LysR substrate binding domain AV743_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_08580 PF13244 Domain of unknown function (DUF4040) AV743_08580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AV743_08580 PF00361 Proton-conducting membrane transporter AV743_08580 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AV743_08585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AV743_08590 PF00361 Proton-conducting membrane transporter AV743_08595 PF01899 Na+/H+ ion antiporter subunit AV743_08600 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AV743_08630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV743_08635 PF02016 LD-carboxypeptidase N-terminal domain AV743_08635 PF17676 LD-carboxypeptidase C-terminal domain AV743_08640 PF00378 Enoyl-CoA hydratase/isomerase AV743_08645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV743_08655 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_08660 PF00005 ABC transporter AV743_08660 PF12848 ABC transporter AV743_08665 PF00005 ABC transporter AV743_08690 PF01205 Uncharacterized protein family UPF0029 AV743_08695 PF00085 Thioredoxin AV743_08705 PF00860 Permease family AV743_08710 PF00814 Glycoprotease family AV743_08720 PF02660 Glycerol-3-phosphate acyltransferase AV743_08725 PF01975 Survival protein SurE AV743_08735 PF01476 LysM domain AV743_08735 PF01551 Peptidase family M23 AV743_08755 PF05958 tRNA (Uracil-5-)-methyltransferase AV743_08760 PF09278 MerR, DNA binding AV743_08760 PF00376 MerR family regulatory protein AV743_08770 PF00462 Glutaredoxin AV743_08770 PF08534 Redoxin AV743_08775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV743_08775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_08780 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AV743_08785 PF03009 Glycerophosphoryl diester phosphodiesterase family AV743_08790 PF13145 PPIC-type PPIASE domain AV743_08795 PF13472 GDSL-like Lipase/Acylhydrolase family AV743_08800 PF00005 ABC transporter AV743_08810 PF04972 BON domain AV743_08820 PF05532 CsbD-like AV743_08850 PF04305 Protein of unknown function (DUF455) AV743_08855 PF13406 Transglycosylase SLT domain AV743_08875 PF01037 Lrp/AsnC ligand binding domain AV743_08885 PF04127 DNA / pantothenate metabolism flavoprotein AV743_08885 PF02441 Flavoprotein AV743_08890 PF01252 Signal peptidase (SPase) II AV743_08895 PF06827 Zinc finger found in FPG and IleRS AV743_08895 PF08264 Anticodon-binding domain of tRNA AV743_08895 PF00133 tRNA synthetases class I (I, L, M and V) AV743_08900 PF01687 Riboflavin kinase AV743_08900 PF06574 FAD synthetase AV743_08905 PF00551 Formyl transferase AV743_08925 PF13361 UvrD-like helicase C-terminal domain AV743_08925 PF00580 UvrD/REP helicase N-terminal domain AV743_08930 PF07715 TonB-dependent Receptor Plug Domain AV743_08935 PF00005 ABC transporter AV743_08935 PF12848 ABC transporter AV743_08940 PF05175 Methyltransferase small domain AV743_08945 PF07687 Peptidase dimerisation domain AV743_08945 PF01546 Peptidase family M20/M25/M40 AV743_08950 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AV743_08950 PF14602 Hexapeptide repeat of succinyl-transferase AV743_08950 PF00132 Bacterial transferase hexapeptide (six repeats) AV743_08985 PF00313 'Cold-shock' DNA-binding domain AV743_09000 PF03350 Uncharacterized protein family, UPF0114 AV743_09005 PF05697 Bacterial trigger factor protein (TF) AV743_09005 PF05698 Bacterial trigger factor protein (TF) C-terminus AV743_09005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV743_09010 PF00574 Clp protease AV743_09015 PF07724 AAA domain (Cdc48 subfamily) AV743_09015 PF10431 C-terminal, D2-small domain, of ClpB protein AV743_09015 PF06689 ClpX C4-type zinc finger AV743_09020 PF02190 ATP-dependent protease La (LON) substrate-binding domain AV743_09020 PF00004 ATPase family associated with various cellular activities (AAA) AV743_09020 PF05362 Lon protease (S16) C-terminal proteolytic domain AV743_09025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_09025 PF03466 LysR substrate binding domain AV743_09030 PF02515 CoA-transferase family III AV743_09035 PF03401 Tripartite tricarboxylate transporter family receptor AV743_09045 PF00378 Enoyl-CoA hydratase/isomerase AV743_09055 PF00108 Thiolase, N-terminal domain AV743_09055 PF02803 Thiolase, C-terminal domain AV743_09075 PF01144 Coenzyme A transferase AV743_09080 PF01144 Coenzyme A transferase AV743_09085 PF03401 Tripartite tricarboxylate transporter family receptor AV743_09110 PF03212 Pertactin AV743_09110 PF03797 Autotransporter beta-domain AV743_09115 PF01726 LexA DNA binding domain AV743_09115 PF00717 Peptidase S24-like AV743_09120 PF00155 Aminotransferase class I and II AV743_09125 PF04851 Type III restriction enzyme, res subunit AV743_09125 PF12344 Ultra-violet resistance protein B AV743_09125 PF02151 UvrB/uvrC motif AV743_09125 PF17757 UvrB interaction domain AV743_09125 PF00271 Helicase conserved C-terminal domain AV743_09130 PF01451 Low molecular weight phosphotyrosine protein phosphatase AV743_09135 PF02082 Transcriptional regulator AV743_09140 PF00266 Aminotransferase class-V AV743_09145 PF01592 NifU-like N terminal domain AV743_09150 PF01521 Iron-sulphur cluster biosynthesis AV743_09155 PF07743 HSCB C-terminal oligomerisation domain AV743_09160 PF00012 Hsp70 protein AV743_09165 PF00111 2Fe-2S iron-sulfur cluster binding domain AV743_09170 PF04384 Iron-sulphur cluster assembly AV743_09175 PF02142 MGS-like domain AV743_09185 PF00378 Enoyl-CoA hydratase/isomerase AV743_09200 PF17042 Nucleotide-binding C-terminal domain AV743_09200 PF07005 Sugar-binding N-terminal domain AV743_09220 PF02261 Aspartate decarboxylase AV743_09225 PF00175 Oxidoreductase NAD-binding domain AV743_09225 PF00111 2Fe-2S iron-sulfur cluster binding domain AV743_09225 PF00970 Oxidoreductase FAD-binding domain AV743_09230 PF01266 FAD dependent oxidoreductase AV743_09235 PF13416 Bacterial extracellular solute-binding protein AV743_09240 PF03466 LysR substrate binding domain AV743_09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_09255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_09260 PF00528 Binding-protein-dependent transport system inner membrane component AV743_09265 PF00528 Binding-protein-dependent transport system inner membrane component AV743_09270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_09270 PF00005 ABC transporter AV743_09275 PF01425 Amidase AV743_09320 PF02272 DHHA1 domain AV743_09320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV743_09320 PF01411 tRNA synthetases class II (A) AV743_09325 PF01206 Sulfurtransferase TusA AV743_09335 PF00886 Ribosomal protein S16 AV743_09340 PF01782 RimM N-terminal domain AV743_09345 PF01746 tRNA (Guanine-1)-methyltransferase AV743_09350 PF00266 Aminotransferase class-V AV743_09370 PF00512 His Kinase A (phospho-acceptor) domain AV743_09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_09370 PF08521 Two-component sensor kinase N-terminal AV743_09385 PF08264 Anticodon-binding domain of tRNA AV743_09385 PF00133 tRNA synthetases class I (I, L, M and V) AV743_09385 PF10458 Valyl tRNA synthetase tRNA binding arm AV743_09390 PF00334 Nucleoside diphosphate kinase AV743_09395 PF04055 Radical SAM superfamily AV743_09405 PF04551 GcpE protein AV743_09410 PF03129 Anticodon binding domain AV743_09410 PF13393 Histidyl-tRNA synthetase AV743_09415 PF09976 Tetratricopeptide repeat-like domain AV743_09420 PF13360 PQQ-like domain AV743_09425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AV743_09425 PF01926 50S ribosome-binding GTPase AV743_09430 PF00155 Aminotransferase class I and II AV743_09435 PF17209 Hfq protein AV743_09440 PF13167 GTP-binding GTPase N-terminal AV743_09440 PF16360 GTP-binding GTPase Middle Region AV743_09440 PF01926 50S ribosome-binding GTPase AV743_09445 PF01145 SPFH domain / Band 7 family AV743_09445 PF12221 Bacterial membrane protein N terminal AV743_09450 PF01145 SPFH domain / Band 7 family AV743_09455 PF13393 Histidyl-tRNA synthetase AV743_09460 PF00709 Adenylosuccinate synthetase AV743_09470 PF01165 Ribosomal protein S21 AV743_09475 PF08275 DNA primase catalytic core, N-terminal domain AV743_09475 PF10410 DnaB-helicase binding domain of primase AV743_09475 PF08278 DNA primase DnaG DnaB-binding AV743_09475 PF01807 CHC2 zinc finger AV743_09480 PF04545 Sigma-70, region 4 AV743_09480 PF04542 Sigma-70 region 2 AV743_09480 PF00140 Sigma-70 factor, region 1.2 AV743_09480 PF03979 Sigma-70 factor, region 1.1 AV743_09480 PF04539 Sigma-70 region 3 AV743_09480 PF04546 Sigma-70, non-essential region AV743_09510 PF01594 AI-2E family transporter AV743_09515 PF01061 ABC-2 type transporter AV743_09520 PF00005 ABC transporter AV743_09545 PF13746 4Fe-4S dicluster domain AV743_09545 PF12801 4Fe-4S binding domain AV743_09545 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AV743_09550 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AV743_09550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV743_09585 PF00202 Aminotransferase class-III AV743_09590 PF00155 Aminotransferase class I and II AV743_09600 PF13649 Methyltransferase domain AV743_09605 PF03788 LrgA family AV743_09625 PF02954 Bacterial regulatory protein, Fis family AV743_09625 PF01590 GAF domain AV743_09625 PF00158 Sigma-54 interaction domain AV743_09630 PF00171 Aldehyde dehydrogenase family AV743_09645 PF04286 Protein of unknown function (DUF445) AV743_09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_09650 PF03466 LysR substrate binding domain AV743_09655 PF02567 Phenazine biosynthesis-like protein AV743_09660 PF07237 Protein of unknown function (DUF1428) AV743_09665 PF02805 Metal binding domain of Ada AV743_09665 PF12833 Helix-turn-helix domain AV743_09675 PF03625 Domain of unknown function DUF302 AV743_09675 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AV743_09695 PF01740 STAS domain AV743_09695 PF00916 Sulfate permease family AV743_09710 PF02535 ZIP Zinc transporter AV743_09730 PF07690 Major Facilitator Superfamily AV743_09750 PF06719 AraC-type transcriptional regulator N-terminus AV743_09750 PF12833 Helix-turn-helix domain AV743_09760 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV743_09765 PF01799 [2Fe-2S] binding domain AV743_09765 PF00111 2Fe-2S iron-sulfur cluster binding domain AV743_09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_09775 PF03466 LysR substrate binding domain AV743_09800 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_09800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV743_09825 PF03401 Tripartite tricarboxylate transporter family receptor AV743_09830 PF01522 Polysaccharide deacetylase AV743_09840 PF01425 Amidase AV743_09845 PF01425 Amidase AV743_09880 PF01152 Bacterial-like globin AV743_09905 PF03401 Tripartite tricarboxylate transporter family receptor AV743_09925 PF02803 Thiolase, C-terminal domain AV743_09925 PF00108 Thiolase, N-terminal domain AV743_09930 PF00501 AMP-binding enzyme AV743_09930 PF14535 AMP-binding enzyme C-terminal domain AV743_09935 PF07859 alpha/beta hydrolase fold AV743_09940 PF02515 CoA-transferase family III AV743_09945 PF00111 2Fe-2S iron-sulfur cluster binding domain AV743_09955 PF00378 Enoyl-CoA hydratase/isomerase AV743_09960 PF00866 Ring hydroxylating beta subunit AV743_09965 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AV743_09965 PF00355 Rieske [2Fe-2S] domain AV743_09970 PF13458 Periplasmic binding protein AV743_09975 PF02653 Branched-chain amino acid transport system / permease component AV743_09995 PF00463 Isocitrate lyase family AV743_10000 PF14489 QueF-like protein AV743_10000 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AV743_10015 PF01066 CDP-alcohol phosphatidyltransferase AV743_10020 PF01541 GIY-YIG catalytic domain AV743_10020 PF08459 UvrC Helix-hairpin-helix N-terminal AV743_10020 PF02151 UvrB/uvrC motif AV743_10025 PF00933 Glycosyl hydrolase family 3 N terminal domain AV743_10030 PF01648 4'-phosphopantetheinyl transferase superfamily AV743_10035 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AV743_10045 PF00873 AcrB/AcrD/AcrF family AV743_10050 PF00529 HlyD membrane-fusion protein of T1SS AV743_10050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV743_10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_10070 PF03459 TOBE domain AV743_10075 PF00005 ABC transporter AV743_10090 PF00080 Copper/zinc superoxide dismutase (SODC) AV743_10095 PF03401 Tripartite tricarboxylate transporter family receptor AV743_10105 PF00378 Enoyl-CoA hydratase/isomerase AV743_10115 PF00392 Bacterial regulatory proteins, gntR family AV743_10115 PF07729 FCD domain AV743_10125 PF02803 Thiolase, C-terminal domain AV743_10125 PF00108 Thiolase, N-terminal domain AV743_10130 PF01361 Tautomerase enzyme AV743_10135 PF00005 ABC transporter AV743_10135 PF00571 CBS domain AV743_10140 PF00528 Binding-protein-dependent transport system inner membrane component AV743_10160 PF07690 Major Facilitator Superfamily AV743_10165 PF00830 Ribosomal L28 family AV743_10170 PF00471 Ribosomal protein L33 AV743_10175 PF01740 STAS domain AV743_10175 PF00916 Sulfate permease family AV743_10190 PF01047 MarR family AV743_10195 PF07690 Major Facilitator Superfamily AV743_10200 PF09334 tRNA synthetases class I (M) AV743_10200 PF13603 Leucyl-tRNA synthetase, Domain 2 AV743_10200 PF00133 tRNA synthetases class I (I, L, M and V) AV743_10200 PF08264 Anticodon-binding domain of tRNA AV743_10215 PF00171 Aldehyde dehydrogenase family AV743_10225 PF01425 Amidase AV743_10230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV743_10230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV743_10280 PF00575 S1 RNA binding domain AV743_10280 PF10150 Ribonuclease E/G family AV743_10285 PF01842 ACT domain AV743_10285 PF00800 Prephenate dehydratase AV743_10295 PF07690 Major Facilitator Superfamily AV743_10300 PF00005 ABC transporter AV743_10300 PF00664 ABC transporter transmembrane region AV743_10305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AV743_10315 PF03692 Putative zinc- or iron-chelating domain AV743_10330 PF00884 Sulfatase AV743_10335 PF00534 Glycosyl transferases group 1 AV743_10335 PF13439 Glycosyltransferase Family 4 AV743_10340 PF00535 Glycosyl transferase family 2 AV743_10345 PF01522 Polysaccharide deacetylase AV743_10350 PF13439 Glycosyltransferase Family 4 AV743_10350 PF00534 Glycosyl transferases group 1 AV743_10355 PF14579 Helix-hairpin-helix motif AV743_10355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AV743_10355 PF01336 OB-fold nucleic acid binding domain AV743_10355 PF02811 PHP domain AV743_10355 PF07733 Bacterial DNA polymerase III alpha NTPase domain AV743_10365 PF11898 Domain of unknown function (DUF3418) AV743_10365 PF00271 Helicase conserved C-terminal domain AV743_10365 PF04408 Helicase associated domain (HA2) AV743_10365 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AV743_10365 PF00270 DEAD/DEAH box helicase AV743_10370 PF00696 Amino acid kinase family AV743_10370 PF00583 Acetyltransferase (GNAT) family AV743_10375 PF04362 Bacterial Fe(2+) trafficking AV743_10380 PF04185 Phosphoesterase family AV743_10380 PF05506 Domain of unknown function (DUF756) AV743_10385 PF01895 PhoU domain AV743_10390 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AV743_10395 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_10395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_10395 PF18158 Adaptive response protein AidB N-terminal domain AV743_10400 PF02646 RmuC family AV743_10410 PF02245 Methylpurine-DNA glycosylase (MPG) AV743_10420 PF00528 Binding-protein-dependent transport system inner membrane component AV743_10425 PF00528 Binding-protein-dependent transport system inner membrane component AV743_10430 PF08402 TOBE domain AV743_10430 PF00005 ABC transporter AV743_10435 PF13416 Bacterial extracellular solute-binding protein AV743_10455 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_10465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV743_10485 PF00285 Citrate synthase, C-terminal domain AV743_10490 PF03937 Flavinator of succinate dehydrogenase AV743_10495 PF13085 2Fe-2S iron-sulfur cluster binding domain AV743_10500 PF02910 Fumarate reductase flavoprotein C-term AV743_10500 PF00890 FAD binding domain AV743_10505 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AV743_10510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AV743_10515 PF07702 UTRA domain AV743_10515 PF00392 Bacterial regulatory proteins, gntR family AV743_10520 PF00056 lactate/malate dehydrogenase, NAD binding domain AV743_10520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AV743_10530 PF00285 Citrate synthase, C-terminal domain AV743_10535 PF00330 Aconitase family (aconitate hydratase) AV743_10535 PF00694 Aconitase C-terminal domain AV743_10540 PF04303 PrpF protein AV743_10545 PF03972 MmgE/PrpD family AV743_10555 PF02926 THUMP domain AV743_10555 PF01170 Putative RNA methylase family UPF0020 AV743_10575 PF16177 Acetyl-coenzyme A synthetase N-terminus AV743_10575 PF00501 AMP-binding enzyme AV743_10575 PF13193 AMP-binding enzyme C-terminal domain AV743_10585 PF01430 Hsp33 protein AV743_10610 PF00211 Adenylate and Guanylate cyclase catalytic domain AV743_10615 PF04977 Septum formation initiator AV743_10620 PF03952 Enolase, N-terminal domain AV743_10620 PF00113 Enolase, C-terminal TIM barrel domain AV743_10630 PF00793 DAHP synthetase I family AV743_10635 PF06418 CTP synthase N-terminus AV743_10635 PF00117 Glutamine amidotransferase class-I AV743_10645 PF01321 Creatinase/Prolidase N-terminal domain AV743_10645 PF00557 Metallopeptidase family M24 AV743_10655 PF03576 Peptidase family S58 AV743_10660 PF12911 N-terminal TM domain of oligopeptide transport permease C AV743_10660 PF00528 Binding-protein-dependent transport system inner membrane component AV743_10665 PF00528 Binding-protein-dependent transport system inner membrane component AV743_10670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_10675 PF00005 ABC transporter AV743_10675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_10680 PF01112 Asparaginase AV743_10690 PF01144 Coenzyme A transferase AV743_10710 PF16363 GDP-mannose 4,6 dehydratase AV743_10725 PF01212 Beta-eliminating lyase AV743_10730 PF00892 EamA-like transporter family AV743_10735 PF13193 AMP-binding enzyme C-terminal domain AV743_10735 PF00501 AMP-binding enzyme AV743_10735 PF16177 Acetyl-coenzyme A synthetase N-terminus AV743_10745 PF03928 Haem-degrading AV743_10750 PF13193 AMP-binding enzyme C-terminal domain AV743_10750 PF16177 Acetyl-coenzyme A synthetase N-terminus AV743_10750 PF00501 AMP-binding enzyme AV743_10755 PF13193 AMP-binding enzyme C-terminal domain AV743_10755 PF00501 AMP-binding enzyme AV743_10755 PF16177 Acetyl-coenzyme A synthetase N-terminus AV743_10760 PF00877 NlpC/P60 family AV743_10775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_10775 PF03466 LysR substrate binding domain AV743_10780 PF00171 Aldehyde dehydrogenase family AV743_10790 PF03466 LysR substrate binding domain AV743_10790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_10800 PF02789 Cytosol aminopeptidase family, N-terminal domain AV743_10800 PF00883 Cytosol aminopeptidase family, catalytic domain AV743_10805 PF04364 DNA polymerase III chi subunit, HolC AV743_10815 PF01027 Inhibitor of apoptosis-promoting Bax1 AV743_10820 PF03401 Tripartite tricarboxylate transporter family receptor AV743_10830 PF00291 Pyridoxal-phosphate dependent enzyme AV743_10840 PF02565 Recombination protein O C terminal AV743_10840 PF11967 Recombination protein O N terminal AV743_10845 PF01926 50S ribosome-binding GTPase AV743_10845 PF07650 KH domain AV743_10850 PF00035 Double-stranded RNA binding motif AV743_10850 PF14622 Ribonuclease-III-like AV743_10855 PF10502 Signal peptidase, peptidase S26 AV743_10860 PF00679 Elongation factor G C-terminus AV743_10860 PF06421 GTP-binding protein LepA C-terminus AV743_10860 PF03144 Elongation factor Tu domain 2 AV743_10860 PF00009 Elongation factor Tu GTP binding domain AV743_10865 PF13180 PDZ domain AV743_10865 PF17820 PDZ domain AV743_10880 PF08281 Sigma-70, region 4 AV743_10880 PF04542 Sigma-70 region 2 AV743_10890 PF02801 Beta-ketoacyl synthase, C-terminal domain AV743_10890 PF00109 Beta-ketoacyl synthase, N-terminal domain AV743_10895 PF00550 Phosphopantetheine attachment site AV743_10905 PF00698 Acyl transferase domain AV743_10910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AV743_10910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AV743_10915 PF02504 Fatty acid synthesis protein AV743_10920 PF01783 Ribosomal L32p protein family AV743_10925 PF02620 Large ribosomal RNA subunit accumulation protein YceD AV743_10930 PF02545 Maf-like protein AV743_10940 PF01510 N-acetylmuramoyl-L-alanine amidase AV743_10955 PF03883 Peroxide stress protein YaaA AV743_10970 PF00106 short chain dehydrogenase AV743_10975 PF00999 Sodium/hydrogen exchanger family AV743_10975 PF02254 TrkA-N domain AV743_10985 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AV743_11015 PF07690 Major Facilitator Superfamily AV743_11020 PF00593 TonB dependent receptor AV743_11020 PF07715 TonB-dependent Receptor Plug Domain AV743_11020 PF07660 Secretin and TonB N terminus short domain AV743_11035 PF00990 Diguanylate cyclase, GGDEF domain AV743_11035 PF17151 Periplasmic sensor domain AV743_11060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV743_11060 PF02403 Seryl-tRNA synthetase N-terminal domain AV743_11065 PF00004 ATPase family associated with various cellular activities (AAA) AV743_11065 PF12002 MgsA AAA+ ATPase C terminal AV743_11065 PF16193 AAA C-terminal domain AV743_11070 PF03548 Outer membrane lipoprotein carrier protein LolA AV743_11075 PF09397 Ftsk gamma domain AV743_11075 PF17854 FtsK alpha domain AV743_11075 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AV743_11075 PF01580 FtsK/SpoIIIE family AV743_11080 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_11085 PF00488 MutS domain V AV743_11085 PF01713 Smr domain AV743_11090 PF00893 Small Multidrug Resistance protein AV743_11100 PF00474 Sodium:solute symporter family AV743_11115 PF03814 Potassium-transporting ATPase A subunit AV743_11125 PF02669 K+-transporting ATPase, c chain AV743_11135 PF00486 Transcriptional regulatory protein, C terminal AV743_11135 PF00072 Response regulator receiver domain AV743_11155 PF00180 Isocitrate/isopropylmalate dehydrogenase AV743_11170 PF00034 Cytochrome c AV743_11180 PF01434 Peptidase family M41 AV743_11180 PF00004 ATPase family associated with various cellular activities (AAA) AV743_11180 PF17862 AAA+ lid domain AV743_11200 PF05193 Peptidase M16 inactive domain AV743_11200 PF00675 Insulinase (Peptidase family M16) AV743_11205 PF00684 DnaJ central domain AV743_11205 PF01556 DnaJ C terminal domain AV743_11205 PF00226 DnaJ domain AV743_11210 PF00012 Hsp70 protein AV743_11220 PF01025 GrpE AV743_11230 PF00762 Ferrochelatase AV743_11235 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AV743_11235 PF01628 HrcA protein C terminal domain AV743_11240 PF01513 ATP-NAD kinase AV743_11245 PF02463 RecF/RecN/SMC N terminal domain AV743_11250 PF01475 Ferric uptake regulator family AV743_11255 PF04355 SmpA / OmlA family AV743_11260 PF05173 Dihydrodipicolinate reductase, C-terminus AV743_11260 PF01113 Dihydrodipicolinate reductase, N-terminus AV743_11265 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AV743_11265 PF01565 FAD binding domain AV743_11275 PF00561 alpha/beta hydrolase fold AV743_11285 PF03401 Tripartite tricarboxylate transporter family receptor AV743_11290 PF00551 Formyl transferase AV743_11300 PF08669 Glycine cleavage T-protein C-terminal barrel domain AV743_11300 PF01571 Aminomethyltransferase folate-binding domain AV743_11300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_11300 PF17806 Sarcosine oxidase A3 domain AV743_11305 PF04267 Sarcosine oxidase, delta subunit family AV743_11310 PF01266 FAD dependent oxidoreductase AV743_11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_11320 PF03466 LysR substrate binding domain AV743_11325 PF02615 Malate/L-lactate dehydrogenase AV743_11330 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AV743_11330 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AV743_11335 PF03401 Tripartite tricarboxylate transporter family receptor AV743_11350 PF00437 Type II/IV secretion system protein AV743_11355 PF13629 Pilus formation protein N terminal region AV743_11355 PF00263 Bacterial type II and III secretion system protein AV743_11355 PF04972 BON domain AV743_11390 PF01557 Fumarylacetoacetate (FAA) hydrolase family AV743_11395 PF00719 Inorganic pyrophosphatase AV743_11415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AV743_11415 PF03900 Porphobilinogen deaminase, C-terminal domain AV743_11420 PF03741 Integral membrane protein TerC family AV743_11425 PF03741 Integral membrane protein TerC family AV743_11430 PF00549 CoA-ligase AV743_11430 PF02629 CoA binding domain AV743_11435 PF00549 CoA-ligase AV743_11435 PF08442 ATP-grasp domain AV743_11445 PF01717 Cobalamin-independent synthase, Catalytic domain AV743_11445 PF08267 Cobalamin-independent synthase, N-terminal domain AV743_11450 PF03466 LysR substrate binding domain AV743_11450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_11455 PF02631 RecX family AV743_11460 PF00154 recA bacterial DNA recombination protein AV743_11465 PF00486 Transcriptional regulatory protein, C terminal AV743_11465 PF00072 Response regulator receiver domain AV743_11470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_11470 PF08521 Two-component sensor kinase N-terminal AV743_11470 PF00512 His Kinase A (phospho-acceptor) domain AV743_11475 PF08946 Osmosensory transporter coiled coil AV743_11475 PF00083 Sugar (and other) transporter AV743_11480 PF00378 Enoyl-CoA hydratase/isomerase AV743_11480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV743_11480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV743_11485 PF08402 TOBE domain AV743_11485 PF00005 ABC transporter AV743_11490 PF00528 Binding-protein-dependent transport system inner membrane component AV743_11500 PF00106 short chain dehydrogenase AV743_11520 PF03466 LysR substrate binding domain AV743_11520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_11525 PF02515 CoA-transferase family III AV743_11535 PF04381 Putative exonuclease, RdgC AV743_11540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV743_11540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV743_11560 PF04231 Endonuclease I AV743_11605 PF00216 Bacterial DNA-binding protein AV743_11610 PF01588 Putative tRNA binding domain AV743_11610 PF03147 Ferredoxin-fold anticodon binding domain AV743_11610 PF03484 tRNA synthetase B5 domain AV743_11610 PF03483 B3/4 domain AV743_11610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AV743_11615 PF01409 tRNA synthetases class II core domain (F) AV743_11615 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AV743_11620 PF00453 Ribosomal protein L20 AV743_11625 PF01632 Ribosomal protein L35 AV743_11640 PF00155 Aminotransferase class I and II AV743_11640 PF00392 Bacterial regulatory proteins, gntR family AV743_11650 PF00692 dUTPase AV743_11665 PF13847 Methyltransferase domain AV743_11680 PF09335 SNARE associated Golgi protein AV743_11710 PF00356 Bacterial regulatory proteins, lacI family AV743_11715 PF00005 ABC transporter AV743_11715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_11725 PF00528 Binding-protein-dependent transport system inner membrane component AV743_11730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_11735 PF07687 Peptidase dimerisation domain AV743_11735 PF01546 Peptidase family M20/M25/M40 AV743_11750 PF01810 LysE type translocator AV743_11760 PF00392 Bacterial regulatory proteins, gntR family AV743_11760 PF00155 Aminotransferase class I and II AV743_11765 PF07690 Major Facilitator Superfamily AV743_11770 PF08240 Alcohol dehydrogenase GroES-like domain AV743_11770 PF00107 Zinc-binding dehydrogenase AV743_11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_11785 PF03466 LysR substrate binding domain AV743_11790 PF01965 DJ-1/PfpI family AV743_11790 PF12833 Helix-turn-helix domain AV743_11795 PF12706 Beta-lactamase superfamily domain AV743_11810 PF10996 Beta-Casp domain AV743_11810 PF00753 Metallo-beta-lactamase superfamily AV743_11810 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AV743_11815 PF01740 STAS domain AV743_11815 PF00916 Sulfate permease family AV743_11835 PF00528 Binding-protein-dependent transport system inner membrane component AV743_11840 PF00005 ABC transporter AV743_11850 PF01979 Amidohydrolase family AV743_11865 PF07690 Major Facilitator Superfamily AV743_11875 PF13657 HipA N-terminal domain AV743_11875 PF07804 HipA-like C-terminal domain AV743_11890 PF00117 Glutamine amidotransferase class-I AV743_11890 PF02540 NAD synthase AV743_11890 PF00958 GMP synthase C terminal domain AV743_11895 PF00571 CBS domain AV743_11895 PF00478 IMP dehydrogenase / GMP reductase domain AV743_11915 PF00202 Aminotransferase class-III AV743_11920 PF00171 Aldehyde dehydrogenase family AV743_11925 PF00459 Inositol monophosphatase family AV743_11930 PF02146 Sir2 family AV743_11940 PF00132 Bacterial transferase hexapeptide (six repeats) AV743_11945 PF00342 Phosphoglucose isomerase AV743_11950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV743_11950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV743_11950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV743_11950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV743_11960 PF00072 Response regulator receiver domain AV743_11960 PF00196 Bacterial regulatory proteins, luxR family AV743_11970 PF09317 Domain of unknown function (DUF1974) AV743_11970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_11970 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_11970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_11975 PF00108 Thiolase, N-terminal domain AV743_11975 PF02803 Thiolase, C-terminal domain AV743_11980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV743_11980 PF00378 Enoyl-CoA hydratase/isomerase AV743_11980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV743_11990 PF00378 Enoyl-CoA hydratase/isomerase AV743_11990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV743_11990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV743_11995 PF02803 Thiolase, C-terminal domain AV743_11995 PF00108 Thiolase, N-terminal domain AV743_12030 PF03401 Tripartite tricarboxylate transporter family receptor AV743_12040 PF00593 TonB dependent receptor AV743_12040 PF07715 TonB-dependent Receptor Plug Domain AV743_12045 PF00970 Oxidoreductase FAD-binding domain AV743_12045 PF00042 Globin AV743_12045 PF00175 Oxidoreductase NAD-binding domain AV743_12060 PF00857 Isochorismatase family AV743_12075 PF17645 Arylmalonate decarboxylase AV743_12080 PF01494 FAD binding domain AV743_12085 PF00111 2Fe-2S iron-sulfur cluster binding domain AV743_12085 PF01799 [2Fe-2S] binding domain AV743_12095 PF00005 ABC transporter AV743_12100 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_12100 PF00005 ABC transporter AV743_12110 PF13458 Periplasmic binding protein AV743_12120 PF12802 MarR family AV743_12140 PF01522 Polysaccharide deacetylase AV743_12140 PF14883 Hypothetical glycosyl hydrolase family 13 AV743_12145 PF00535 Glycosyl transferase family 2 AV743_12155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV743_12180 PF01042 Endoribonuclease L-PSP AV743_12185 PF03401 Tripartite tricarboxylate transporter family receptor AV743_12190 PF13380 CoA binding domain AV743_12195 PF09339 IclR helix-turn-helix domain AV743_12195 PF01614 Bacterial transcriptional regulator AV743_12200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV743_12200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_12210 PF08402 TOBE domain AV743_12210 PF00005 ABC transporter AV743_12215 PF00528 Binding-protein-dependent transport system inner membrane component AV743_12220 PF00528 Binding-protein-dependent transport system inner membrane component AV743_12235 PF03466 LysR substrate binding domain AV743_12235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_12250 PF01958 Domain of unknown function DUF108 AV743_12250 PF03447 Homoserine dehydrogenase, NAD binding domain AV743_12255 PF00561 alpha/beta hydrolase fold AV743_12260 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_12265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV743_12270 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AV743_12275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV743_12275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV743_12300 PF01842 ACT domain AV743_12300 PF00696 Amino acid kinase family AV743_12300 PF13840 ACT domain AV743_12305 PF09179 TilS substrate binding domain AV743_12305 PF01171 PP-loop family AV743_12315 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AV743_12320 PF06029 AlkA N-terminal domain AV743_12320 PF12833 Helix-turn-helix domain AV743_12320 PF02805 Metal binding domain of Ada AV743_12320 PF00730 HhH-GPD superfamily base excision DNA repair protein AV743_12325 PF09190 DALR domain AV743_12325 PF01406 tRNA synthetases class I (C) catalytic domain AV743_12335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AV743_12340 PF00149 Calcineurin-like phosphoesterase AV743_12345 PF02673 Bacitracin resistance protein BacA AV743_12350 PF03741 Integral membrane protein TerC family AV743_12350 PF03471 Transporter associated domain AV743_12355 PF00459 Inositol monophosphatase family AV743_12360 PF00588 SpoU rRNA Methylase family AV743_12365 PF03401 Tripartite tricarboxylate transporter family receptor AV743_12375 PF00924 Mechanosensitive ion channel AV743_12375 PF05552 Conserved TM helix AV743_12415 PF03358 NADPH-dependent FMN reductase AV743_12420 PF07311 Dodecin AV743_12425 PF05188 MutS domain II AV743_12425 PF05192 MutS domain III AV743_12425 PF05190 MutS family domain IV AV743_12425 PF01624 MutS domain I AV743_12425 PF00488 MutS domain V AV743_12430 PF08007 Cupin superfamily protein AV743_12435 PF16970 Type-1 fimbrial protein, A AV743_12440 PF06804 NlpB/DapX lipoprotein AV743_12445 PF00701 Dihydrodipicolinate synthetase family AV743_12460 PF01300 Telomere recombination AV743_12465 PF04228 Putative neutral zinc metallopeptidase AV743_12485 PF02132 RecR protein AV743_12485 PF13662 Toprim domain AV743_12490 PF02575 YbaB/EbfC DNA-binding family AV743_12495 PF12170 DNA polymerase III tau subunit V interacting with alpha AV743_12495 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AV743_12495 PF12169 DNA polymerase III subunits gamma and tau domain III AV743_12505 PF12705 PD-(D/E)XK nuclease superfamily AV743_12505 PF00580 UvrD/REP helicase N-terminal domain AV743_12505 PF13361 UvrD-like helicase C-terminal domain AV743_12525 PF00768 D-alanyl-D-alanine carboxypeptidase AV743_12535 PF01174 SNO glutamine amidotransferase family AV743_12540 PF04073 Aminoacyl-tRNA editing domain AV743_12545 PF02899 Phage integrase, N-terminal SAM-like domain AV743_12545 PF00589 Phage integrase family AV743_12550 PF03466 LysR substrate binding domain AV743_12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_12555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_12555 PF00205 Thiamine pyrophosphate enzyme, central domain AV743_12555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_12560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_12560 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_12560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_12570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_12570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_12575 PF00005 ABC transporter AV743_12580 PF00528 Binding-protein-dependent transport system inner membrane component AV743_12585 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_12590 PF00491 Arginase family AV743_12595 PF01614 Bacterial transcriptional regulator AV743_12595 PF09339 IclR helix-turn-helix domain AV743_12600 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_12605 PF01300 Telomere recombination AV743_12605 PF03481 Putative GTP-binding controlling metal-binding AV743_12610 PF02222 ATP-grasp domain AV743_12610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AV743_12615 PF00731 AIR carboxylase AV743_12620 PF02600 Disulfide bond formation protein DsbB AV743_12630 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AV743_12635 PF15723 Motility quorum-sensing regulator, toxin of MqsA AV743_12640 PF01259 SAICAR synthetase AV743_12650 PF01116 Fructose-bisphosphate aldolase class-II AV743_12665 PF03069 Acetamidase/Formamidase family AV743_12670 PF02293 AmiS/UreI family transporter AV743_12680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV743_12680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV743_12695 PF00005 ABC transporter AV743_12700 PF00528 Binding-protein-dependent transport system inner membrane component AV743_12705 PF00528 Binding-protein-dependent transport system inner membrane component AV743_12710 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_12720 PF02423 Ornithine cyclodeaminase/mu-crystallin family AV743_12735 PF05524 PEP-utilising enzyme, N-terminal AV743_12735 PF02896 PEP-utilising enzyme, TIM barrel domain AV743_12735 PF00391 PEP-utilising enzyme, mobile domain AV743_12740 PF00381 PTS HPr component phosphorylation site AV743_12750 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AV743_12750 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AV743_12755 PF00707 Translation initiation factor IF-3, C-terminal domain AV743_12755 PF05198 Translation initiation factor IF-3, N-terminal domain AV743_12760 PF02824 TGS domain AV743_12760 PF03129 Anticodon binding domain AV743_12760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV743_12760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV743_12765 PF00196 Bacterial regulatory proteins, luxR family AV743_12785 PF17158 Membrane-associated sensor, integral membrane domain AV743_12785 PF00990 Diguanylate cyclase, GGDEF domain AV743_12800 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AV743_12805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV743_12815 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_12820 PF01416 tRNA pseudouridine synthase AV743_12830 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV743_12830 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV743_12835 PF00180 Isocitrate/isopropylmalate dehydrogenase AV743_12840 PF00694 Aconitase C-terminal domain AV743_12845 PF00330 Aconitase family (aconitate hydratase) AV743_12850 PF12849 PBP superfamily domain AV743_12855 PF00005 ABC transporter AV743_12890 PF00384 Molybdopterin oxidoreductase AV743_12890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AV743_12890 PF01568 Molydopterin dinucleotide binding domain AV743_12920 PF10609 NUBPL iron-transfer P-loop NTPase AV743_12925 PF12804 MobA-like NTP transferase domain AV743_12930 PF03453 MoeA N-terminal region (domain I and II) AV743_12930 PF03454 MoeA C-terminal region (domain IV) AV743_12930 PF00994 Probable molybdopterin binding domain AV743_12935 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AV743_12940 PF01435 Peptidase family M48 AV743_12945 PF01264 Chorismate synthase AV743_12950 PF00563 EAL domain AV743_12950 PF00990 Diguanylate cyclase, GGDEF domain AV743_12950 PF08447 PAS fold AV743_12950 PF08448 PAS fold AV743_12965 PF00528 Binding-protein-dependent transport system inner membrane component AV743_12970 PF00005 ABC transporter AV743_12970 PF08402 TOBE domain AV743_12980 PF00300 Histidine phosphatase superfamily (branch 1) AV743_12990 PF02142 MGS-like domain AV743_12990 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AV743_12990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV743_13000 PF00923 Transaldolase/Fructose-6-phosphate aldolase AV743_13025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV743_13025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV743_13030 PF00378 Enoyl-CoA hydratase/isomerase AV743_13035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_13035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_13035 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_13040 PF03658 RnfH family Ubiquitin AV743_13045 PF03364 Polyketide cyclase / dehydrase and lipid transport AV743_13050 PF01668 SmpB protein AV743_13055 PF00990 Diguanylate cyclase, GGDEF domain AV743_13055 PF08448 PAS fold AV743_13060 PF01145 SPFH domain / Band 7 family AV743_13060 PF16200 C-terminal region of band_7 AV743_13075 PF00958 GMP synthase C terminal domain AV743_13075 PF00117 Glutamine amidotransferase class-I AV743_13080 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AV743_13080 PF02896 PEP-utilising enzyme, TIM barrel domain AV743_13080 PF00391 PEP-utilising enzyme, mobile domain AV743_13085 PF03618 Kinase/pyrophosphorylase AV743_13090 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV743_13090 PF00588 SpoU rRNA Methylase family AV743_13095 PF01351 Ribonuclease HII AV743_13100 PF02684 Lipid-A-disaccharide synthetase AV743_13105 PF00132 Bacterial transferase hexapeptide (six repeats) AV743_13105 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AV743_13110 PF07977 FabA-like domain AV743_13115 PF00132 Bacterial transferase hexapeptide (six repeats) AV743_13115 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AV743_13120 PF03938 Outer membrane protein (OmpH-like) AV743_13125 PF07244 Surface antigen variable number repeat AV743_13125 PF01103 Surface antigen AV743_13130 PF02163 Peptidase family M50 AV743_13130 PF17820 PDZ domain AV743_13135 PF13288 DXP reductoisomerase C-terminal domain AV743_13135 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AV743_13135 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AV743_13145 PF01255 Putative undecaprenyl diphosphate synthase AV743_13150 PF01765 Ribosome recycling factor AV743_13155 PF00696 Amino acid kinase family AV743_13160 PF00889 Elongation factor TS AV743_13165 PF00318 Ribosomal protein S2 AV743_13170 PF00557 Metallopeptidase family M24 AV743_13175 PF01909 Nucleotidyltransferase domain AV743_13175 PF01966 HD domain AV743_13175 PF08335 GlnD PII-uridylyltransferase AV743_13190 PF00156 Phosphoribosyl transferase domain AV743_13205 PF02875 Mur ligase family, glutamate ligase domain AV743_13205 PF08245 Mur ligase middle domain AV743_13215 PF02465 Flagellar hook-associated protein 2 N-terminus AV743_13215 PF07195 Flagellar hook-associated protein 2 C-terminus AV743_13215 PF07196 Flagellin hook IN motif AV743_13220 PF02561 Flagellar protein FliS AV743_13240 PF01312 FlhB HrpN YscU SpaS Family AV743_13250 PF02049 Flagellar hook-basal body complex protein FliE AV743_13255 PF08345 Flagellar M-ring protein C-terminal AV743_13255 PF01514 Secretory protein of YscJ/FliF family AV743_13260 PF14841 FliG middle domain AV743_13260 PF14842 FliG N-terminal domain AV743_13260 PF01706 FliG C-terminal domain AV743_13270 PF18269 T3SS EscN ATPase C-terminal domain AV743_13270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV743_13295 PF03748 Flagellar basal body-associated protein FliL AV743_13300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV743_13300 PF02154 Flagellar motor switch protein FliM AV743_13305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV743_13305 PF16973 Flagellar motor switch protein FliN N-terminal AV743_13310 PF04347 Flagellar biosynthesis protein, FliO AV743_13315 PF00813 FliP family AV743_13320 PF01313 Bacterial export proteins, family 3 AV743_13325 PF01311 Bacterial export proteins, family 1 AV743_13335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_13335 PF08447 PAS fold AV743_13340 PF02203 Tar ligand binding domain homologue AV743_13340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_13340 PF00672 HAMP domain AV743_13345 PF02203 Tar ligand binding domain homologue AV743_13345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_13345 PF00672 HAMP domain AV743_13350 PF00669 Bacterial flagellin N-terminal helical region AV743_13355 PF00460 Flagella basal body rod protein AV743_13355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13360 PF10135 Rod binding protein AV743_13360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AV743_13365 PF02119 Flagellar P-ring protein AV743_13370 PF02107 Flagellar L-ring protein AV743_13375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13375 PF00460 Flagella basal body rod protein AV743_13380 PF00460 Flagella basal body rod protein AV743_13380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13385 PF00460 Flagella basal body rod protein AV743_13385 PF07559 Flagellar basal body protein FlaE AV743_13390 PF13861 FlgD Tudor-like domain AV743_13390 PF13860 FlgD Ig-like domain AV743_13390 PF03963 Flagellar hook capping protein - N-terminal region AV743_13395 PF00460 Flagella basal body rod protein AV743_13395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13400 PF00460 Flagella basal body rod protein AV743_13410 PF04316 Anti-sigma-28 factor, FlgM AV743_13430 PF01312 FlhB HrpN YscU SpaS Family AV743_13440 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_13450 PF00005 ABC transporter AV743_13465 PF03748 Flagellar basal body-associated protein FliL AV743_13470 PF02154 Flagellar motor switch protein FliM AV743_13470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV743_13475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV743_13475 PF16973 Flagellar motor switch protein FliN N-terminal AV743_13480 PF04347 Flagellar biosynthesis protein, FliO AV743_13485 PF00813 FliP family AV743_13490 PF01313 Bacterial export proteins, family 3 AV743_13495 PF01311 Bacterial export proteins, family 1 AV743_13505 PF08447 PAS fold AV743_13505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_13510 PF02203 Tar ligand binding domain homologue AV743_13510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_13510 PF00672 HAMP domain AV743_13515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_13515 PF02203 Tar ligand binding domain homologue AV743_13515 PF00672 HAMP domain AV743_13520 PF00669 Bacterial flagellin N-terminal helical region AV743_13525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13525 PF00460 Flagella basal body rod protein AV743_13530 PF10135 Rod binding protein AV743_13530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AV743_13535 PF02119 Flagellar P-ring protein AV743_13540 PF02107 Flagellar L-ring protein AV743_13545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13545 PF00460 Flagella basal body rod protein AV743_13550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13550 PF00460 Flagella basal body rod protein AV743_13555 PF00460 Flagella basal body rod protein AV743_13555 PF07559 Flagellar basal body protein FlaE AV743_13555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13560 PF13861 FlgD Tudor-like domain AV743_13560 PF03963 Flagellar hook capping protein - N-terminal region AV743_13560 PF13860 FlgD Ig-like domain AV743_13565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13565 PF00460 Flagella basal body rod protein AV743_13570 PF00460 Flagella basal body rod protein AV743_13580 PF04316 Anti-sigma-28 factor, FlgM AV743_13600 PF01312 FlhB HrpN YscU SpaS Family AV743_13610 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_13620 PF00005 ABC transporter AV743_13635 PF03748 Flagellar basal body-associated protein FliL AV743_13640 PF02154 Flagellar motor switch protein FliM AV743_13640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV743_13645 PF16973 Flagellar motor switch protein FliN N-terminal AV743_13645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV743_13650 PF04347 Flagellar biosynthesis protein, FliO AV743_13655 PF00813 FliP family AV743_13660 PF01313 Bacterial export proteins, family 3 AV743_13665 PF01311 Bacterial export proteins, family 1 AV743_13675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_13675 PF08447 PAS fold AV743_13680 PF00672 HAMP domain AV743_13680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_13680 PF02203 Tar ligand binding domain homologue AV743_13685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_13685 PF02203 Tar ligand binding domain homologue AV743_13685 PF00672 HAMP domain AV743_13690 PF00669 Bacterial flagellin N-terminal helical region AV743_13695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13695 PF00460 Flagella basal body rod protein AV743_13700 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AV743_13700 PF10135 Rod binding protein AV743_13705 PF02119 Flagellar P-ring protein AV743_13710 PF02107 Flagellar L-ring protein AV743_13715 PF00460 Flagella basal body rod protein AV743_13715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13720 PF00460 Flagella basal body rod protein AV743_13720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13725 PF00460 Flagella basal body rod protein AV743_13725 PF07559 Flagellar basal body protein FlaE AV743_13725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13730 PF13861 FlgD Tudor-like domain AV743_13730 PF13860 FlgD Ig-like domain AV743_13730 PF03963 Flagellar hook capping protein - N-terminal region AV743_13735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_13735 PF00460 Flagella basal body rod protein AV743_13740 PF00460 Flagella basal body rod protein AV743_13750 PF04316 Anti-sigma-28 factor, FlgM AV743_13770 PF01312 FlhB HrpN YscU SpaS Family AV743_13780 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_13790 PF00005 ABC transporter AV743_13800 PF02558 Ketopantoate reductase PanE/ApbA AV743_13800 PF08546 Ketopantoate reductase PanE/ApbA C terminal AV743_13805 PF13378 Enolase C-terminal domain-like AV743_13810 PF03401 Tripartite tricarboxylate transporter family receptor AV743_13820 PF00694 Aconitase C-terminal domain AV743_13825 PF00356 Bacterial regulatory proteins, lacI family AV743_13830 PF03401 Tripartite tricarboxylate transporter family receptor AV743_13835 PF02515 CoA-transferase family III AV743_13845 PF03401 Tripartite tricarboxylate transporter family receptor AV743_13855 PF00392 Bacterial regulatory proteins, gntR family AV743_13855 PF07729 FCD domain AV743_13860 PF03328 HpcH/HpaI aldolase/citrate lyase family AV743_13870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_13870 PF03466 LysR substrate binding domain AV743_13880 PF12951 Passenger-associated-transport-repeat AV743_13890 PF03551 Transcriptional regulator PadR-like family AV743_13900 PF03372 Endonuclease/Exonuclease/phosphatase family AV743_13905 PF13091 PLD-like domain AV743_13920 PF00528 Binding-protein-dependent transport system inner membrane component AV743_13925 PF00005 ABC transporter AV743_13925 PF08402 TOBE domain AV743_13935 PF00300 Histidine phosphatase superfamily (branch 1) AV743_13950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AV743_13950 PF00117 Glutamine amidotransferase class-I AV743_13955 PF00923 Transaldolase/Fructose-6-phosphate aldolase AV743_13985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV743_13985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV743_13990 PF00378 Enoyl-CoA hydratase/isomerase AV743_13995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_13995 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_13995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_14000 PF03658 RnfH family Ubiquitin AV743_14005 PF03364 Polyketide cyclase / dehydrase and lipid transport AV743_14010 PF01668 SmpB protein AV743_14015 PF08448 PAS fold AV743_14015 PF00990 Diguanylate cyclase, GGDEF domain AV743_14020 PF16200 C-terminal region of band_7 AV743_14020 PF01145 SPFH domain / Band 7 family AV743_14035 PF00117 Glutamine amidotransferase class-I AV743_14035 PF00958 GMP synthase C terminal domain AV743_14040 PF00391 PEP-utilising enzyme, mobile domain AV743_14040 PF02896 PEP-utilising enzyme, TIM barrel domain AV743_14040 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AV743_14045 PF03618 Kinase/pyrophosphorylase AV743_14050 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV743_14050 PF00588 SpoU rRNA Methylase family AV743_14055 PF01351 Ribonuclease HII AV743_14060 PF02684 Lipid-A-disaccharide synthetase AV743_14065 PF00132 Bacterial transferase hexapeptide (six repeats) AV743_14065 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AV743_14070 PF07977 FabA-like domain AV743_14075 PF00132 Bacterial transferase hexapeptide (six repeats) AV743_14075 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AV743_14080 PF03938 Outer membrane protein (OmpH-like) AV743_14085 PF07244 Surface antigen variable number repeat AV743_14085 PF01103 Surface antigen AV743_14090 PF17820 PDZ domain AV743_14090 PF02163 Peptidase family M50 AV743_14095 PF13288 DXP reductoisomerase C-terminal domain AV743_14095 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AV743_14095 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AV743_14105 PF01255 Putative undecaprenyl diphosphate synthase AV743_14110 PF01765 Ribosome recycling factor AV743_14115 PF00696 Amino acid kinase family AV743_14120 PF00889 Elongation factor TS AV743_14125 PF00318 Ribosomal protein S2 AV743_14130 PF00557 Metallopeptidase family M24 AV743_14135 PF01909 Nucleotidyltransferase domain AV743_14135 PF08335 GlnD PII-uridylyltransferase AV743_14135 PF01966 HD domain AV743_14150 PF00156 Phosphoribosyl transferase domain AV743_14165 PF08245 Mur ligase middle domain AV743_14165 PF02875 Mur ligase family, glutamate ligase domain AV743_14175 PF07196 Flagellin hook IN motif AV743_14175 PF07195 Flagellar hook-associated protein 2 C-terminus AV743_14175 PF02465 Flagellar hook-associated protein 2 N-terminus AV743_14180 PF02561 Flagellar protein FliS AV743_14200 PF01312 FlhB HrpN YscU SpaS Family AV743_14210 PF02049 Flagellar hook-basal body complex protein FliE AV743_14215 PF01514 Secretory protein of YscJ/FliF family AV743_14215 PF08345 Flagellar M-ring protein C-terminal AV743_14220 PF01706 FliG C-terminal domain AV743_14220 PF14842 FliG N-terminal domain AV743_14220 PF14841 FliG middle domain AV743_14230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV743_14230 PF18269 T3SS EscN ATPase C-terminal domain AV743_14255 PF03748 Flagellar basal body-associated protein FliL AV743_14260 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV743_14260 PF02154 Flagellar motor switch protein FliM AV743_14265 PF16973 Flagellar motor switch protein FliN N-terminal AV743_14265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV743_14270 PF04347 Flagellar biosynthesis protein, FliO AV743_14275 PF00813 FliP family AV743_14280 PF01313 Bacterial export proteins, family 3 AV743_14285 PF01311 Bacterial export proteins, family 1 AV743_14295 PF08447 PAS fold AV743_14295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_14300 PF00672 HAMP domain AV743_14300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_14300 PF02203 Tar ligand binding domain homologue AV743_14305 PF00672 HAMP domain AV743_14305 PF02203 Tar ligand binding domain homologue AV743_14305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_14310 PF00669 Bacterial flagellin N-terminal helical region AV743_14315 PF00460 Flagella basal body rod protein AV743_14315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_14320 PF10135 Rod binding protein AV743_14320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AV743_14325 PF02119 Flagellar P-ring protein AV743_14330 PF02107 Flagellar L-ring protein AV743_14335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_14335 PF00460 Flagella basal body rod protein AV743_14340 PF00460 Flagella basal body rod protein AV743_14340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_14345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_14345 PF00460 Flagella basal body rod protein AV743_14345 PF07559 Flagellar basal body protein FlaE AV743_14350 PF03963 Flagellar hook capping protein - N-terminal region AV743_14350 PF13861 FlgD Tudor-like domain AV743_14350 PF13860 FlgD Ig-like domain AV743_14355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV743_14355 PF00460 Flagella basal body rod protein AV743_14360 PF00460 Flagella basal body rod protein AV743_14370 PF04316 Anti-sigma-28 factor, FlgM AV743_14390 PF01312 FlhB HrpN YscU SpaS Family AV743_14400 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_14410 PF00005 ABC transporter AV743_14420 PF02558 Ketopantoate reductase PanE/ApbA AV743_14420 PF08546 Ketopantoate reductase PanE/ApbA C terminal AV743_14425 PF13378 Enolase C-terminal domain-like AV743_14430 PF03401 Tripartite tricarboxylate transporter family receptor AV743_14440 PF00694 Aconitase C-terminal domain AV743_14445 PF00356 Bacterial regulatory proteins, lacI family AV743_14450 PF03401 Tripartite tricarboxylate transporter family receptor AV743_14455 PF02515 CoA-transferase family III AV743_14465 PF03401 Tripartite tricarboxylate transporter family receptor AV743_14475 PF00392 Bacterial regulatory proteins, gntR family AV743_14475 PF07729 FCD domain AV743_14490 PF03466 LysR substrate binding domain AV743_14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_14500 PF12951 Passenger-associated-transport-repeat AV743_14510 PF03551 Transcriptional regulator PadR-like family AV743_14520 PF03372 Endonuclease/Exonuclease/phosphatase family AV743_14525 PF13091 PLD-like domain AV743_14550 PF00149 Calcineurin-like phosphoesterase AV743_14550 PF12320 Type 5 capsule protein repressor C-terminal domain AV743_14555 PF01266 FAD dependent oxidoreductase AV743_14560 PF01037 Lrp/AsnC ligand binding domain AV743_14585 PF00528 Binding-protein-dependent transport system inner membrane component AV743_14595 PF00005 ABC transporter AV743_14595 PF17912 MalK OB fold domain AV743_14600 PF00455 DeoR C terminal sensor domain AV743_14600 PF08220 DeoR-like helix-turn-helix domain AV743_14605 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AV743_14605 PF01266 FAD dependent oxidoreductase AV743_14620 PF03401 Tripartite tricarboxylate transporter family receptor AV743_14625 PF14537 Cytochrome c3 AV743_14625 PF00890 FAD binding domain AV743_14650 PF03401 Tripartite tricarboxylate transporter family receptor AV743_14655 PF00701 Dihydrodipicolinate synthetase family AV743_14675 PF00472 RF-1 domain AV743_14685 PF01242 6-pyruvoyl tetrahydropterin synthase AV743_14690 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_14695 PF00596 Class II Aldolase and Adducin N-terminal domain AV743_14720 PF13332 Hemagglutinin repeat AV743_14720 PF13018 Extended Signal Peptide of Type V secretion system AV743_14720 PF05594 Haemagluttinin repeat AV743_14720 PF05860 haemagglutination activity domain AV743_14725 PF02769 AIR synthase related protein, C-terminal domain AV743_14725 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AV743_14725 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AV743_14730 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AV743_14735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV743_14740 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_14755 PF16970 Type-1 fimbrial protein, A AV743_14765 PF03061 Thioesterase superfamily AV743_14770 PF00378 Enoyl-CoA hydratase/isomerase AV743_14775 PF00171 Aldehyde dehydrogenase family AV743_14795 PF01883 Iron-sulfur cluster assembly protein AV743_14800 PF05138 Phenylacetic acid catabolic protein AV743_14805 PF06243 Phenylacetic acid degradation B AV743_14810 PF05138 Phenylacetic acid catabolic protein AV743_14815 PF07848 PaaX-like protein AV743_14815 PF08223 PaaX-like protein C-terminal domain AV743_14820 PF03853 YjeF-related protein N-terminus AV743_14825 PF00929 Exonuclease AV743_14830 PF01435 Peptidase family M48 AV743_14835 PF03193 RsgA GTPase AV743_14850 PF00528 Binding-protein-dependent transport system inner membrane component AV743_14855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_14865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_14865 PF03466 LysR substrate binding domain AV743_14890 PF00543 Nitrogen regulatory protein P-II AV743_14895 PF02540 NAD synthase AV743_14895 PF00795 Carbon-nitrogen hydrolase AV743_14900 PF00924 Mechanosensitive ion channel AV743_14905 PF14698 Argininosuccinate lyase C-terminal AV743_14905 PF00206 Lyase AV743_14925 PF07724 AAA domain (Cdc48 subfamily) AV743_14925 PF10431 C-terminal, D2-small domain, of ClpB protein AV743_14925 PF00004 ATPase family associated with various cellular activities (AAA) AV743_14925 PF02861 Clp amino terminal domain, pathogenicity island component AV743_14925 PF17871 AAA lid domain AV743_14930 PF00027 Cyclic nucleotide-binding domain AV743_14930 PF13545 Crp-like helix-turn-helix domain AV743_14945 PF00293 NUDIX domain AV743_14950 PF12843 Putative quorum-sensing-regulated virulence factor AV743_14960 PF08281 Sigma-70, region 4 AV743_14960 PF04542 Sigma-70 region 2 AV743_14960 PF12680 SnoaL-like domain AV743_14965 PF02627 Carboxymuconolactone decarboxylase family AV743_15000 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_15005 PF00528 Binding-protein-dependent transport system inner membrane component AV743_15010 PF00528 Binding-protein-dependent transport system inner membrane component AV743_15015 PF00005 ABC transporter AV743_15035 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AV743_15060 PF03401 Tripartite tricarboxylate transporter family receptor AV743_15065 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV743_15065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV743_15070 PF03466 LysR substrate binding domain AV743_15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_15080 PF02016 LD-carboxypeptidase N-terminal domain AV743_15080 PF17676 LD-carboxypeptidase C-terminal domain AV743_15095 PF07690 Major Facilitator Superfamily AV743_15105 PF03466 LysR substrate binding domain AV743_15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_15110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV743_15110 PF13378 Enolase C-terminal domain-like AV743_15115 PF03401 Tripartite tricarboxylate transporter family receptor AV743_15135 PF02567 Phenazine biosynthesis-like protein AV743_15145 PF03239 Iron permease FTR1 family AV743_15155 PF10634 Fe2+ transport protein AV743_15160 PF05233 PHB accumulation regulatory domain AV743_15160 PF07879 PHB/PHA accumulation regulator DNA-binding domain AV743_15165 PF00106 short chain dehydrogenase AV743_15170 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AV743_15180 PF01479 S4 domain AV743_15180 PF00849 RNA pseudouridylate synthase AV743_15185 PF13525 Outer membrane lipoprotein AV743_15190 PF13307 Helicase C-terminal domain AV743_15190 PF04851 Type III restriction enzyme, res subunit AV743_15195 PF16921 Tex protein YqgF-like domain AV743_15195 PF17674 HHH domain AV743_15195 PF00575 S1 RNA binding domain AV743_15195 PF09371 Tex-like protein N-terminal domain AV743_15200 PF00579 tRNA synthetases class I (W and Y) AV743_15225 PF00593 TonB dependent receptor AV743_15225 PF07715 TonB-dependent Receptor Plug Domain AV743_15230 PF04773 FecR protein AV743_15230 PF16220 Domain of unknown function (DUF4880) AV743_15235 PF08281 Sigma-70, region 4 AV743_15235 PF04542 Sigma-70 region 2 AV743_15260 PF03401 Tripartite tricarboxylate transporter family receptor AV743_15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_15270 PF03466 LysR substrate binding domain AV743_15280 PF03969 AFG1-like ATPase AV743_15285 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_15285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV743_15290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV743_15290 PF02817 e3 binding domain AV743_15290 PF00364 Biotin-requiring enzyme AV743_15295 PF02779 Transketolase, pyrimidine binding domain AV743_15295 PF16870 2-oxoglutarate dehydrogenase C-terminal AV743_15295 PF00676 Dehydrogenase E1 component AV743_15295 PF16078 2-oxoglutarate dehydrogenase N-terminus AV743_15305 PF01037 Lrp/AsnC ligand binding domain AV743_15310 PF17831 Pyruvate dehydrogenase E1 component middle domain AV743_15310 PF00456 Transketolase, thiamine diphosphate binding domain AV743_15315 PF03949 Malic enzyme, NAD binding domain AV743_15315 PF00390 Malic enzyme, N-terminal domain AV743_15315 PF01515 Phosphate acetyl/butaryl transferase AV743_15320 PF16970 Type-1 fimbrial protein, A AV743_15335 PF01272 Transcription elongation factor, GreA/GreB, C-term AV743_15335 PF03449 Transcription elongation factor, N-terminal AV743_15340 PF02811 PHP domain AV743_15350 PF03772 Competence protein AV743_15350 PF00753 Metallo-beta-lactamase superfamily AV743_15350 PF13567 Domain of unknown function (DUF4131) AV743_15370 PF01026 TatD related DNase AV743_15375 PF00005 ABC transporter AV743_15380 PF12704 MacB-like periplasmic core domain AV743_15380 PF02687 FtsX-like permease family AV743_15390 PF02272 DHHA1 domain AV743_15390 PF17768 RecJ OB domain AV743_15390 PF01368 DHH family AV743_15400 PF00106 short chain dehydrogenase AV743_15405 PF00152 tRNA synthetases class II (D, K and N) AV743_15405 PF01336 OB-fold nucleic acid binding domain AV743_15415 PF00440 Bacterial regulatory proteins, tetR family AV743_15415 PF17932 Tetracyclin repressor-like, C-terminal domain AV743_15420 PF00501 AMP-binding enzyme AV743_15425 PF00005 ABC transporter AV743_15445 PF00005 ABC transporter AV743_15445 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_15455 PF00512 His Kinase A (phospho-acceptor) domain AV743_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_15455 PF07689 KaiB domain AV743_15460 PF00072 Response regulator receiver domain AV743_15460 PF00486 Transcriptional regulatory protein, C terminal AV743_15475 PF03631 Virulence factor BrkB AV743_15490 PF01207 Dihydrouridine synthase (Dus) AV743_15495 PF01636 Phosphotransferase enzyme family AV743_15520 PF01985 CRS1 / YhbY (CRM) domain AV743_15525 PF01728 FtsJ-like methyltransferase AV743_15530 PF17862 AAA+ lid domain AV743_15530 PF01434 Peptidase family M41 AV743_15530 PF00004 ATPase family associated with various cellular activities (AAA) AV743_15530 PF06480 FtsH Extracellular AV743_15535 PF00809 Pterin binding enzyme AV743_15540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV743_15540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV743_15540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV743_15540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV743_15550 PF02541 Ppx/GppA phosphatase family AV743_15555 PF17941 Polyphosphate kinase C-terminal domain 1 AV743_15555 PF13090 Polyphosphate kinase C-terminal domain 2 AV743_15555 PF13089 Polyphosphate kinase N-terminal domain AV743_15555 PF02503 Polyphosphate kinase middle domain AV743_15560 PF12849 PBP superfamily domain AV743_15565 PF00528 Binding-protein-dependent transport system inner membrane component AV743_15570 PF00528 Binding-protein-dependent transport system inner membrane component AV743_15575 PF00005 ABC transporter AV743_15595 PF01337 Barstar (barnase inhibitor) AV743_15615 PF00155 Aminotransferase class I and II AV743_15620 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AV743_15620 PF01464 Transglycosylase SLT domain AV743_15625 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AV743_15650 PF10414 Sirohaem synthase dimerisation region AV743_15650 PF14824 Sirohaem biosynthesis protein central AV743_15650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV743_15655 PF03797 Autotransporter beta-domain AV743_15655 PF03212 Pertactin AV743_15670 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AV743_15675 PF02547 Queuosine biosynthesis protein AV743_15680 PF01702 Queuine tRNA-ribosyltransferase AV743_15685 PF02699 Preprotein translocase subunit AV743_15690 PF07549 SecD/SecF GG Motif AV743_15690 PF13721 SecD export protein N-terminal TM region AV743_15690 PF02355 Protein export membrane protein AV743_15695 PF07549 SecD/SecF GG Motif AV743_15695 PF02355 Protein export membrane protein AV743_15710 PF04055 Radical SAM superfamily AV743_15710 PF00919 Uncharacterized protein family UPF0004 AV743_15710 PF01938 TRAM domain AV743_15715 PF02562 PhoH-like protein AV743_15720 PF02130 Uncharacterized protein family UPF0054 AV743_15725 PF00571 CBS domain AV743_15725 PF03471 Transporter associated domain AV743_15730 PF00795 Carbon-nitrogen hydrolase AV743_15735 PF00248 Aldo/keto reductase family AV743_15760 PF04344 Chemotaxis phosphatase, CheZ AV743_15765 PF00072 Response regulator receiver domain AV743_15770 PF00072 Response regulator receiver domain AV743_15770 PF01339 CheB methylesterase AV743_15780 PF02203 Tar ligand binding domain homologue AV743_15780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV743_15780 PF00672 HAMP domain AV743_15785 PF01584 CheW-like domain AV743_15790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_15790 PF02895 Signal transducing histidine kinase, homodimeric domain AV743_15790 PF09078 CheY binding AV743_15790 PF01627 Hpt domain AV743_15790 PF01584 CheW-like domain AV743_15795 PF00072 Response regulator receiver domain AV743_15800 PF13677 Membrane MotB of proton-channel complex MotA/MotB AV743_15800 PF00691 OmpA family AV743_15805 PF01618 MotA/TolQ/ExbB proton channel family AV743_15810 PF05280 Flagellar transcriptional activator (FlhC) AV743_15815 PF05247 Flagellar transcriptional activator (FlhD) AV743_15820 PF04539 Sigma-70 region 3 AV743_15820 PF04542 Sigma-70 region 2 AV743_15820 PF04545 Sigma-70, region 4 AV743_15835 PF01176 Translation initiation factor 1A / IF-1 AV743_15845 PF08525 Opacity-associated protein A N-terminal motif AV743_15845 PF01476 LysM domain AV743_15845 PF01551 Peptidase family M23 AV743_15855 PF00994 Probable molybdopterin binding domain AV743_15865 PF01384 Phosphate transporter family AV743_15870 PF03591 AzlC protein AV743_15880 PF00226 DnaJ domain AV743_15880 PF01556 DnaJ C terminal domain AV743_15905 PF14834 Glutathione S-transferase, C-terminal domain AV743_15905 PF02798 Glutathione S-transferase, N-terminal domain AV743_15910 PF11339 Protein of unknown function (DUF3141) AV743_15915 PF01515 Phosphate acetyl/butaryl transferase AV743_15920 PF00871 Acetokinase family AV743_15930 PF00162 Phosphoglycerate kinase AV743_15935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AV743_15935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV743_15940 PF02780 Transketolase, C-terminal domain AV743_15940 PF02779 Transketolase, pyrimidine binding domain AV743_15940 PF00456 Transketolase, thiamine diphosphate binding domain AV743_15945 PF04452 RNA methyltransferase AV743_15955 PF00669 Bacterial flagellin N-terminal helical region AV743_15955 PF00700 Bacterial flagellin C-terminal helical region AV743_15960 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_15960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV743_15965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV743_15965 PF02817 e3 binding domain AV743_15965 PF00364 Biotin-requiring enzyme AV743_15970 PF17831 Pyruvate dehydrogenase E1 component middle domain AV743_15970 PF00456 Transketolase, thiamine diphosphate binding domain AV743_15975 PF00512 His Kinase A (phospho-acceptor) domain AV743_15975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_15975 PF00989 PAS fold AV743_15980 PF00196 Bacterial regulatory proteins, luxR family AV743_15980 PF00072 Response regulator receiver domain AV743_15985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AV743_15985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AV743_15990 PF01432 Peptidase family M3 AV743_15995 PF02630 SCO1/SenC AV743_16010 PF00873 AcrB/AcrD/AcrF family AV743_16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_16020 PF03466 LysR substrate binding domain AV743_16025 PF01479 S4 domain AV743_16025 PF00849 RNA pseudouridylate synthase AV743_16030 PF04345 Chorismate lyase AV743_16045 PF00248 Aldo/keto reductase family AV743_16050 PF00293 NUDIX domain AV743_16055 PF01245 Ribosomal protein L19 AV743_16070 PF04055 Radical SAM superfamily AV743_16080 PF01507 Phosphoadenosine phosphosulfate reductase family AV743_16085 PF12857 TOBE-like domain AV743_16085 PF17850 CysA C-terminal regulatory domain AV743_16085 PF00005 ABC transporter AV743_16090 PF00528 Binding-protein-dependent transport system inner membrane component AV743_16095 PF00528 Binding-protein-dependent transport system inner membrane component AV743_16110 PF10417 C-terminal domain of 1-Cys peroxiredoxin AV743_16110 PF00578 AhpC/TSA family AV743_16115 PF12806 Acetyl-CoA dehydrogenase C-terminal like AV743_16115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_16115 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_16115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_16120 PF01012 Electron transfer flavoprotein domain AV743_16120 PF00766 Electron transfer flavoprotein FAD-binding domain AV743_16125 PF01012 Electron transfer flavoprotein domain AV743_16130 PF00850 Histone deacetylase domain AV743_16135 PF13406 Transglycosylase SLT domain AV743_16140 PF00291 Pyridoxal-phosphate dependent enzyme AV743_16150 PF10531 SLBB domain AV743_16155 PF01370 NAD dependent epimerase/dehydratase family AV743_16160 PF00294 pfkB family carbohydrate kinase AV743_16165 PF18073 Rubredoxin metal binding domain AV743_16175 PF00216 Bacterial DNA-binding protein AV743_16180 PF00575 S1 RNA binding domain AV743_16185 PF02224 Cytidylate kinase AV743_16190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV743_16195 PF02153 Prephenate dehydrogenase AV743_16200 PF01817 Chorismate mutase type II AV743_16200 PF00800 Prephenate dehydratase AV743_16200 PF01842 ACT domain AV743_16205 PF00266 Aminotransferase class-V AV743_16210 PF03989 DNA gyrase C-terminal domain, beta-propeller AV743_16210 PF00521 DNA gyrase/topoisomerase IV, subunit A AV743_16215 PF00691 OmpA family AV743_16225 PF13419 Haloacid dehalogenase-like hydrolase AV743_16230 PF07690 Major Facilitator Superfamily AV743_16255 PF03466 LysR substrate binding domain AV743_16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_16260 PF03401 Tripartite tricarboxylate transporter family receptor AV743_16285 PF13193 AMP-binding enzyme C-terminal domain AV743_16285 PF00501 AMP-binding enzyme AV743_16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_16295 PF03466 LysR substrate binding domain AV743_16300 PF03401 Tripartite tricarboxylate transporter family receptor AV743_16310 PF01557 Fumarylacetoacetate (FAA) hydrolase family AV743_16325 PF04303 PrpF protein AV743_16335 PF00890 FAD binding domain AV743_16335 PF14537 Cytochrome c3 AV743_16340 PF00171 Aldehyde dehydrogenase family AV743_16345 PF03972 MmgE/PrpD family AV743_16355 PF00528 Binding-protein-dependent transport system inner membrane component AV743_16365 PF09084 NMT1/THI5 like AV743_16385 PF11799 impB/mucB/samB family C-terminal domain AV743_16385 PF11798 IMS family HHH motif AV743_16385 PF00817 impB/mucB/samB family AV743_16400 PF00326 Prolyl oligopeptidase family AV743_16410 PF00149 Calcineurin-like phosphoesterase AV743_16425 PF00248 Aldo/keto reductase family AV743_16430 PF00248 Aldo/keto reductase family AV743_16435 PF00005 ABC transporter AV743_16435 PF00664 ABC transporter transmembrane region AV743_16485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV743_16485 PF00289 Biotin carboxylase, N-terminal domain AV743_16485 PF02785 Biotin carboxylase C-terminal domain AV743_16490 PF00392 Bacterial regulatory proteins, gntR family AV743_16490 PF07702 UTRA domain AV743_16510 PF02436 Conserved carboxylase domain AV743_16510 PF00682 HMGL-like AV743_16510 PF00364 Biotin-requiring enzyme AV743_16515 PF00364 Biotin-requiring enzyme AV743_16545 PF07317 Flagellar regulator YcgR AV743_16545 PF07238 PilZ domain AV743_16565 PF05724 Thiopurine S-methyltransferase (TPMT) AV743_16570 PF00664 ABC transporter transmembrane region AV743_16570 PF00005 ABC transporter AV743_16590 PF11940 Domain of unknown function (DUF3458) Ig-like fold AV743_16590 PF01433 Peptidase family M1 domain AV743_16590 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AV743_16595 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AV743_16605 PF02542 YgbB family AV743_16610 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AV743_16615 PF00270 DEAD/DEAH box helicase AV743_16615 PF03461 TRCF domain AV743_16615 PF17757 UvrB interaction domain AV743_16615 PF00271 Helicase conserved C-terminal domain AV743_16615 PF02559 CarD-like/TRCF domain AV743_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_16625 PF03466 LysR substrate binding domain AV743_16630 PF03401 Tripartite tricarboxylate transporter family receptor AV743_16635 PF00205 Thiamine pyrophosphate enzyme, central domain AV743_16635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_16635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_16650 PF00593 TonB dependent receptor AV743_16650 PF07715 TonB-dependent Receptor Plug Domain AV743_16655 PF00593 TonB dependent receptor AV743_16655 PF07715 TonB-dependent Receptor Plug Domain AV743_16665 PF00361 Proton-conducting membrane transporter AV743_16670 PF00361 Proton-conducting membrane transporter AV743_16670 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AV743_16675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AV743_16675 PF00361 Proton-conducting membrane transporter AV743_16680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AV743_16685 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AV743_16690 PF12838 4Fe-4S dicluster domain AV743_16695 PF00146 NADH dehydrogenase AV743_16700 PF00384 Molybdopterin oxidoreductase AV743_16700 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AV743_16700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AV743_16705 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AV743_16705 PF10531 SLBB domain AV743_16705 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AV743_16715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AV743_16720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AV743_16725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AV743_16730 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AV743_16735 PF13609 Gram-negative porin AV743_16765 PF01569 PAP2 superfamily AV743_16775 PF00781 Diacylglycerol kinase catalytic domain AV743_16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_16780 PF03466 LysR substrate binding domain AV743_16785 PF02028 BCCT, betaine/carnitine/choline family transporter AV743_16795 PF01638 HxlR-like helix-turn-helix AV743_16800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV743_16810 PF02321 Outer membrane efflux protein AV743_16820 PF00127 Copper binding proteins, plastocyanin/azurin family AV743_16830 PF05378 Hydantoinase/oxoprolinase N-terminal region AV743_16830 PF01968 Hydantoinase/oxoprolinase AV743_16840 PF01266 FAD dependent oxidoreductase AV743_16845 PF03401 Tripartite tricarboxylate transporter family receptor AV743_16860 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AV743_16865 PF01053 Cys/Met metabolism PLP-dependent enzyme AV743_16870 PF03466 LysR substrate binding domain AV743_16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_16885 PF03401 Tripartite tricarboxylate transporter family receptor AV743_16900 PF03401 Tripartite tricarboxylate transporter family receptor AV743_16905 PF07476 Methylaspartate ammonia-lyase C-terminus AV743_16905 PF05034 Methylaspartate ammonia-lyase N-terminus AV743_16915 PF02028 BCCT, betaine/carnitine/choline family transporter AV743_16925 PF03840 Preprotein translocase SecG subunit AV743_16930 PF00121 Triosephosphate isomerase AV743_16935 PF02801 Beta-ketoacyl synthase, C-terminal domain AV743_16935 PF00109 Beta-ketoacyl synthase, N-terminal domain AV743_16935 PF08659 KR domain AV743_16935 PF00550 Phosphopantetheine attachment site AV743_16935 PF14765 Polyketide synthase dehydratase AV743_16935 PF16197 Ketoacyl-synthetase C-terminal extension AV743_16935 PF08990 Erythronolide synthase docking AV743_16935 PF08240 Alcohol dehydrogenase GroES-like domain AV743_16935 PF00698 Acyl transferase domain AV743_16950 PF13291 ACT domain AV743_16950 PF00291 Pyridoxal-phosphate dependent enzyme AV743_16965 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AV743_16965 PF00575 S1 RNA binding domain AV743_16965 PF03725 3' exoribonuclease family, domain 2 AV743_16965 PF01138 3' exoribonuclease family, domain 1 AV743_16965 PF00013 KH domain AV743_16970 PF00312 Ribosomal protein S15 AV743_16985 PF01066 CDP-alcohol phosphatidyltransferase AV743_16990 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AV743_16990 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AV743_16995 PF10369 Small subunit of acetolactate synthase AV743_17000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_17000 PF00205 Thiamine pyrophosphate enzyme, central domain AV743_17000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_17100 PF03180 NLPA lipoprotein AV743_17110 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AV743_17110 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AV743_17115 PF00005 ABC transporter AV743_17120 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_17120 PF00005 ABC transporter AV743_17125 PF02653 Branched-chain amino acid transport system / permease component AV743_17130 PF02653 Branched-chain amino acid transport system / permease component AV743_17135 PF13458 Periplasmic binding protein AV743_17140 PF01425 Amidase AV743_17145 PF00484 Carbonic anhydrase AV743_17160 PF09382 RQC domain AV743_17160 PF16124 RecQ zinc-binding AV743_17160 PF00270 DEAD/DEAH box helicase AV743_17160 PF00570 HRDC domain AV743_17160 PF00271 Helicase conserved C-terminal domain AV743_17165 PF17864 RuvB AAA lid domain AV743_17165 PF05491 RuvB C-terminal winged helix domain AV743_17165 PF05496 Holliday junction DNA helicase RuvB P-loop domain AV743_17170 PF00291 Pyridoxal-phosphate dependent enzyme AV743_17175 PF01370 NAD dependent epimerase/dehydratase family AV743_17180 PF01330 RuvA N terminal domain AV743_17180 PF07499 RuvA, C-terminal domain AV743_17185 PF02075 Crossover junction endodeoxyribonuclease RuvC AV743_17190 PF02142 MGS-like domain AV743_17190 PF01808 AICARFT/IMPCHase bienzyme AV743_17195 PF02954 Bacterial regulatory protein, Fis family AV743_17200 PF01207 Dihydrouridine synthase (Dus) AV743_17205 PF01494 FAD binding domain AV743_17215 PF05195 Aminopeptidase P, N-terminal domain AV743_17215 PF00557 Metallopeptidase family M24 AV743_17240 PF13609 Gram-negative porin AV743_17250 PF00483 Nucleotidyl transferase AV743_17255 PF13181 Tetratricopeptide repeat AV743_17255 PF01435 Peptidase family M48 AV743_17260 PF00561 alpha/beta hydrolase fold AV743_17275 PF01063 Amino-transferase class IV AV743_17290 PF00270 DEAD/DEAH box helicase AV743_17290 PF00271 Helicase conserved C-terminal domain AV743_17310 PF02464 Competence-damaged protein AV743_17310 PF18146 Damage-inducible protein CinA KH domain AV743_17310 PF00994 Probable molybdopterin binding domain AV743_17315 PF09339 IclR helix-turn-helix domain AV743_17315 PF01614 Bacterial transcriptional regulator AV743_17320 PF18807 Tripartite Tc toxins repeat AV743_17320 PF05785 Rho-activating domain of cytotoxic necrotizing factor AV743_17325 PF03401 Tripartite tricarboxylate transporter family receptor AV743_17335 PF01180 Dihydroorotate dehydrogenase AV743_17340 PF04377 Arginine-tRNA-protein transferase, C terminus AV743_17340 PF04376 Arginine-tRNA-protein transferase, N terminus AV743_17355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_17355 PF03466 LysR substrate binding domain AV743_17395 PF00392 Bacterial regulatory proteins, gntR family AV743_17395 PF07729 FCD domain AV743_17400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_17400 PF00205 Thiamine pyrophosphate enzyme, central domain AV743_17400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_17405 PF03401 Tripartite tricarboxylate transporter family receptor AV743_17410 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AV743_17415 PF01515 Phosphate acetyl/butaryl transferase AV743_17415 PF03949 Malic enzyme, NAD binding domain AV743_17415 PF00390 Malic enzyme, N-terminal domain AV743_17430 PF00528 Binding-protein-dependent transport system inner membrane component AV743_17435 PF00528 Binding-protein-dependent transport system inner membrane component AV743_17440 PF00005 ABC transporter AV743_17440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_17455 PF03466 LysR substrate binding domain AV743_17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_17470 PF01022 Bacterial regulatory protein, arsR family AV743_17485 PF03594 Benzoate membrane transport protein AV743_17490 PF00037 4Fe-4S binding domain AV743_17495 PF01467 Cytidylyltransferase-like AV743_17505 PF00448 SRP54-type protein, GTPase domain AV743_17505 PF02881 SRP54-type protein, helical bundle domain AV743_17515 PF00528 Binding-protein-dependent transport system inner membrane component AV743_17520 PF00528 Binding-protein-dependent transport system inner membrane component AV743_17555 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AV743_17555 PF00925 GTP cyclohydrolase II AV743_17560 PF00885 6,7-dimethyl-8-ribityllumazine synthase AV743_17565 PF01029 NusB family AV743_17570 PF02769 AIR synthase related protein, C-terminal domain AV743_17570 PF00586 AIR synthase related protein, N-terminal domain AV743_17575 PF04608 Phosphatidylglycerophosphatase A AV743_17580 PF02464 Competence-damaged protein AV743_17580 PF00994 Probable molybdopterin binding domain AV743_17580 PF18146 Damage-inducible protein CinA KH domain AV743_17585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AV743_17590 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_17595 PF01219 Prokaryotic diacylglycerol kinase AV743_17600 PF03631 Virulence factor BrkB AV743_17605 PF03212 Pertactin AV743_17605 PF03797 Autotransporter beta-domain AV743_17610 PF00118 TCP-1/cpn60 chaperonin family AV743_17615 PF00166 Chaperonin 10 Kd subunit AV743_17635 PF00890 FAD binding domain AV743_17645 PF03466 LysR substrate binding domain AV743_17645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_17665 PF00990 Diguanylate cyclase, GGDEF domain AV743_17670 PF00072 Response regulator receiver domain AV743_17705 PF10017 Histidine-specific methyltransferase, SAM-dependent AV743_17715 PF13091 PLD-like domain AV743_17715 PF13396 Phospholipase_D-nuclease N-terminal AV743_17725 PF01645 Conserved region in glutamate synthase AV743_17730 PF04143 Sulphur transport AV743_17735 PF03547 Membrane transport protein AV743_17740 PF13673 Acetyltransferase (GNAT) domain AV743_17760 PF17876 Cold shock domain AV743_17760 PF08461 Ribonuclease R winged-helix domain AV743_17760 PF00773 RNB domain AV743_17760 PF08206 Ribonuclease B OB domain AV743_17760 PF00575 S1 RNA binding domain AV743_17765 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV743_17765 PF00588 SpoU rRNA Methylase family AV743_17770 PF01053 Cys/Met metabolism PLP-dependent enzyme AV743_17775 PF18331 PKHD-type hydroxylase C-terminal domain AV743_17775 PF13640 2OG-Fe(II) oxygenase superfamily AV743_17780 PF00216 Bacterial DNA-binding protein AV743_17795 PF01618 MotA/TolQ/ExbB proton channel family AV743_17800 PF02472 Biopolymer transport protein ExbD/TolR AV743_17805 PF00072 Response regulator receiver domain AV743_17805 PF00486 Transcriptional regulatory protein, C terminal AV743_17810 PF00512 His Kinase A (phospho-acceptor) domain AV743_17810 PF08521 Two-component sensor kinase N-terminal AV743_17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_17815 PF02705 K+ potassium transporter AV743_17820 PF00764 Arginosuccinate synthase AV743_17825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV743_17825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV743_17830 PF00202 Aminotransferase class-III AV743_17840 PF03466 LysR substrate binding domain AV743_17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_17850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV743_17850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV743_17855 PF03401 Tripartite tricarboxylate transporter family receptor AV743_17870 PF07729 FCD domain AV743_17870 PF00392 Bacterial regulatory proteins, gntR family AV743_17890 PF02627 Carboxymuconolactone decarboxylase family AV743_17895 PF00578 AhpC/TSA family AV743_17900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_17900 PF00512 His Kinase A (phospho-acceptor) domain AV743_17900 PF00672 HAMP domain AV743_17910 PF00486 Transcriptional regulatory protein, C terminal AV743_17910 PF00072 Response regulator receiver domain AV743_17915 PF00814 Glycoprotease family AV743_17920 PF03167 Uracil DNA glycosylase superfamily AV743_17925 PF07690 Major Facilitator Superfamily AV743_17930 PF02463 RecF/RecN/SMC N terminal domain AV743_17930 PF06470 SMC proteins Flexible Hinge Domain AV743_17940 PF00533 BRCA1 C Terminus (BRCT) domain AV743_17940 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AV743_17940 PF12826 Helix-hairpin-helix motif AV743_17940 PF03120 NAD-dependent DNA ligase OB-fold domain AV743_17940 PF01653 NAD-dependent DNA ligase adenylation domain AV743_17955 PF04279 Intracellular septation protein A AV743_17960 PF01641 SelR domain AV743_17965 PF00005 ABC transporter AV743_17970 PF02361 Cobalt transport protein AV743_17975 PF02632 BioY family AV743_17990 PF00005 ABC transporter AV743_17990 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_17995 PF01063 Amino-transferase class IV AV743_18010 PF02653 Branched-chain amino acid transport system / permease component AV743_18020 PF00005 ABC transporter AV743_18025 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_18025 PF00005 ABC transporter AV743_18030 PF00633 Helix-hairpin-helix motif AV743_18030 PF00730 HhH-GPD superfamily base excision DNA repair protein AV743_18030 PF10576 Iron-sulfur binding domain of endonuclease III AV743_18035 PF04060 Putative Fe-S cluster AV743_18045 PF00970 Oxidoreductase FAD-binding domain AV743_18045 PF00175 Oxidoreductase NAD-binding domain AV743_18050 PF00037 4Fe-4S binding domain AV743_18050 PF11953 Domain of unknown function (DUF3470) AV743_18055 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AV743_18055 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AV743_18060 PF01042 Endoribonuclease L-PSP AV743_18070 PF06167 Glucose-regulated metallo-peptidase M90 AV743_18075 PF13291 ACT domain AV743_18075 PF04607 Region found in RelA / SpoT proteins AV743_18075 PF02824 TGS domain AV743_18080 PF01546 Peptidase family M20/M25/M40 AV743_18080 PF07687 Peptidase dimerisation domain AV743_18085 PF00291 Pyridoxal-phosphate dependent enzyme AV743_18090 PF00290 Tryptophan synthase alpha chain AV743_18095 PF01039 Carboxyl transferase domain AV743_18095 PF17848 Acetyl-coA carboxylase zinc finger domain AV743_18115 PF00575 S1 RNA binding domain AV743_18115 PF12111 Polyribonucleotide phosphorylase C terminal AV743_18115 PF10150 Ribonuclease E/G family AV743_18120 PF00849 RNA pseudouridylate synthase AV743_18120 PF01479 S4 domain AV743_18125 PF13419 Haloacid dehalogenase-like hydrolase AV743_18130 PF00174 Oxidoreductase molybdopterin binding domain AV743_18135 PF01794 Ferric reductase like transmembrane component AV743_18205 PF06791 Prophage tail length tape measure protein AV743_18275 PF02586 SOS response associated peptidase (SRAP) AV743_18285 PF00486 Transcriptional regulatory protein, C terminal AV743_18285 PF00072 Response regulator receiver domain AV743_18290 PF00293 NUDIX domain AV743_18295 PF04073 Aminoacyl-tRNA editing domain AV743_18295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV743_18295 PF03129 Anticodon binding domain AV743_18300 PF03061 Thioesterase superfamily AV743_18305 PF01618 MotA/TolQ/ExbB proton channel family AV743_18310 PF02472 Biopolymer transport protein ExbD/TolR AV743_18320 PF04052 TolB amino-terminal domain AV743_18320 PF07676 WD40-like Beta Propeller Repeat AV743_18325 PF00691 OmpA family AV743_18335 PF01032 FecCD transport family AV743_18340 PF00005 ABC transporter AV743_18345 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18350 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18395 PF13091 PLD-like domain AV743_18400 PF03372 Endonuclease/Exonuclease/phosphatase family AV743_18405 PF02938 GAD domain AV743_18405 PF00152 tRNA synthetases class II (D, K and N) AV743_18405 PF01336 OB-fold nucleic acid binding domain AV743_18440 PF01370 NAD dependent epimerase/dehydratase family AV743_18440 PF02222 ATP-grasp domain AV743_18445 PF00571 CBS domain AV743_18445 PF01380 SIS domain AV743_18465 PF00005 ABC transporter AV743_18470 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AV743_18475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AV743_18480 PF02603 HPr Serine kinase N terminus AV743_18480 PF07475 HPr Serine kinase C-terminal domain AV743_18485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV743_18485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV743_18485 PF00034 Cytochrome c AV743_18495 PF03668 P-loop ATPase protein family AV743_18500 PF05036 Sporulation related domain AV743_18500 PF03330 Lytic transglycolase AV743_18520 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV743_18520 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV743_18525 PF00941 FAD binding domain in molybdopterin dehydrogenase AV743_18525 PF03450 CO dehydrogenase flavoprotein C-terminal domain AV743_18530 PF09084 NMT1/THI5 like AV743_18535 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18540 PF02441 Flavoprotein AV743_18545 PF00462 Glutaredoxin AV743_18550 PF05175 Methyltransferase small domain AV743_18550 PF17827 PrmC N-terminal domain AV743_18555 PF00472 RF-1 domain AV743_18555 PF03462 PCRF domain AV743_18560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AV743_18560 PF01488 Shikimate / quinate 5-dehydrogenase AV743_18560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AV743_18575 PF01568 Molydopterin dinucleotide binding domain AV743_18575 PF00384 Molybdopterin oxidoreductase AV743_18590 PF13380 CoA binding domain AV743_18590 PF00583 Acetyltransferase (GNAT) family AV743_18590 PF13607 Succinyl-CoA ligase like flavodoxin domain AV743_18595 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18600 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_18600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_18600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_18600 PF12806 Acetyl-CoA dehydrogenase C-terminal like AV743_18605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV743_18605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV743_18605 PF00378 Enoyl-CoA hydratase/isomerase AV743_18610 PF00108 Thiolase, N-terminal domain AV743_18610 PF02803 Thiolase, C-terminal domain AV743_18615 PF01037 Lrp/AsnC ligand binding domain AV743_18620 PF01380 SIS domain AV743_18625 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AV743_18630 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18640 PF00378 Enoyl-CoA hydratase/isomerase AV743_18645 PF00583 Acetyltransferase (GNAT) family AV743_18645 PF13607 Succinyl-CoA ligase like flavodoxin domain AV743_18645 PF13380 CoA binding domain AV743_18650 PF03466 LysR substrate binding domain AV743_18650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_18655 PF08240 Alcohol dehydrogenase GroES-like domain AV743_18655 PF00107 Zinc-binding dehydrogenase AV743_18665 PF01042 Endoribonuclease L-PSP AV743_18675 PF07687 Peptidase dimerisation domain AV743_18675 PF01546 Peptidase family M20/M25/M40 AV743_18680 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_18685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_18685 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_18690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_18690 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_18690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_18695 PF09330 D-lactate dehydrogenase, membrane binding AV743_18695 PF01565 FAD binding domain AV743_18700 PF03466 LysR substrate binding domain AV743_18700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_18705 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18730 PF00701 Dihydrodipicolinate synthetase family AV743_18735 PF03466 LysR substrate binding domain AV743_18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_18740 PF02515 CoA-transferase family III AV743_18745 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_18750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_18750 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_18755 PF01575 MaoC like domain AV743_18770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AV743_18770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AV743_18775 PF00378 Enoyl-CoA hydratase/isomerase AV743_18780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_18780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_18780 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_18785 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18800 PF00676 Dehydrogenase E1 component AV743_18805 PF02779 Transketolase, pyrimidine binding domain AV743_18805 PF02780 Transketolase, C-terminal domain AV743_18810 PF00378 Enoyl-CoA hydratase/isomerase AV743_18815 PF02817 e3 binding domain AV743_18815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV743_18815 PF00364 Biotin-requiring enzyme AV743_18820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_18820 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_18820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_18825 PF13193 AMP-binding enzyme C-terminal domain AV743_18825 PF00501 AMP-binding enzyme AV743_18835 PF13458 Periplasmic binding protein AV743_18840 PF02653 Branched-chain amino acid transport system / permease component AV743_18845 PF00005 ABC transporter AV743_18845 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV743_18850 PF00005 ABC transporter AV743_18855 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_18855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV743_18870 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18885 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18895 PF00899 ThiF family AV743_18900 PF13180 PDZ domain AV743_18900 PF03572 Peptidase family S41 AV743_18905 PF01551 Peptidase family M23 AV743_18910 PF00300 Histidine phosphatase superfamily (branch 1) AV743_18920 PF00462 Glutaredoxin AV743_18925 PF02556 Preprotein translocase subunit SecB AV743_18930 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AV743_18930 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AV743_18935 PF03401 Tripartite tricarboxylate transporter family receptor AV743_18940 PF00588 SpoU rRNA Methylase family AV743_18950 PF08241 Methyltransferase domain AV743_18955 PF04107 Glutamate-cysteine ligase family 2(GCS2) AV743_18960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV743_18970 PF00528 Binding-protein-dependent transport system inner membrane component AV743_18980 PF01799 [2Fe-2S] binding domain AV743_18980 PF00111 2Fe-2S iron-sulfur cluster binding domain AV743_18985 PF00941 FAD binding domain in molybdopterin dehydrogenase AV743_18985 PF03450 CO dehydrogenase flavoprotein C-terminal domain AV743_18990 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV743_18990 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV743_18995 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_19000 PF00355 Rieske [2Fe-2S] domain AV743_19005 PF14759 Reductase C-terminal AV743_19005 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV743_19010 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AV743_19010 PF00355 Rieske [2Fe-2S] domain AV743_19020 PF00857 Isochorismatase family AV743_19035 PF17645 Arylmalonate decarboxylase AV743_19045 PF12804 MobA-like NTP transferase domain AV743_19055 PF01047 MarR family AV743_19060 PF02386 Cation transport protein AV743_19065 PF02254 TrkA-N domain AV743_19065 PF02080 TrkA-C domain AV743_19070 PF02954 Bacterial regulatory protein, Fis family AV743_19070 PF00072 Response regulator receiver domain AV743_19070 PF00158 Sigma-54 interaction domain AV743_19075 PF00672 HAMP domain AV743_19075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_19075 PF00512 His Kinase A (phospho-acceptor) domain AV743_19075 PF00989 PAS fold AV743_19085 PF01189 16S rRNA methyltransferase RsmB/F AV743_19085 PF01029 NusB family AV743_19095 PF01958 Domain of unknown function DUF108 AV743_19095 PF03447 Homoserine dehydrogenase, NAD binding domain AV743_19120 PF03466 LysR substrate binding domain AV743_19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_19130 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19140 PF00155 Aminotransferase class I and II AV743_19145 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_19155 PF00682 HMGL-like AV743_19160 PF17782 DprA winged helix domain AV743_19160 PF02481 DNA recombination-mediator protein A AV743_19165 PF01037 Lrp/AsnC ligand binding domain AV743_19170 PF00266 Aminotransferase class-V AV743_19175 PF01327 Polypeptide deformylase AV743_19180 PF00551 Formyl transferase AV743_19180 PF02911 Formyl transferase, C-terminal domain AV743_19190 PF13419 Haloacid dehalogenase-like hydrolase AV743_19200 PF03641 Possible lysine decarboxylase AV743_19210 PF04055 Radical SAM superfamily AV743_19210 PF18693 TRAM domain AV743_19210 PF00919 Uncharacterized protein family UPF0004 AV743_19215 PF01361 Tautomerase enzyme AV743_19220 PF01266 FAD dependent oxidoreductase AV743_19225 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19230 PF07729 FCD domain AV743_19230 PF00392 Bacterial regulatory proteins, gntR family AV743_19245 PF00202 Aminotransferase class-III AV743_19250 PF00491 Arginase family AV743_19260 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19265 PF02627 Carboxymuconolactone decarboxylase family AV743_19270 PF00378 Enoyl-CoA hydratase/isomerase AV743_19275 PF01614 Bacterial transcriptional regulator AV743_19275 PF09339 IclR helix-turn-helix domain AV743_19280 PF13193 AMP-binding enzyme C-terminal domain AV743_19280 PF00501 AMP-binding enzyme AV743_19285 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19295 PF12951 Passenger-associated-transport-repeat AV743_19295 PF12951 Passenger-associated-transport-repeat AV743_19325 PF14031 Putative serine dehydratase domain AV743_19325 PF01168 Alanine racemase, N-terminal domain AV743_19330 PF07411 Domain of unknown function (DUF1508) AV743_19335 PF01145 SPFH domain / Band 7 family AV743_19345 PF01042 Endoribonuclease L-PSP AV743_19355 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AV743_19365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_19365 PF03466 LysR substrate binding domain AV743_19370 PF07690 Major Facilitator Superfamily AV743_19375 PF00920 Dehydratase family AV743_19380 PF12833 Helix-turn-helix domain AV743_19385 PF08502 LeuA allosteric (dimerisation) domain AV743_19385 PF00682 HMGL-like AV743_19395 PF07859 alpha/beta hydrolase fold AV743_19400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_19405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV743_19410 PF04299 Putative FMN-binding domain AV743_19420 PF13180 PDZ domain AV743_19425 PF01784 NIF3 (NGG1p interacting factor 3) AV743_19430 PF01741 Large-conductance mechanosensitive channel, MscL AV743_19435 PF00355 Rieske [2Fe-2S] domain AV743_19435 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AV743_19440 PF00033 Cytochrome b/b6/petB AV743_19440 PF00032 Cytochrome b(C-terminal)/b6/petD AV743_19445 PF02167 Cytochrome C1 family AV743_19450 PF02798 Glutathione S-transferase, N-terminal domain AV743_19450 PF00043 Glutathione S-transferase, C-terminal domain AV743_19455 PF04386 Stringent starvation protein B AV743_19500 PF00156 Phosphoribosyl transferase domain AV743_19505 PF00664 ABC transporter transmembrane region AV743_19505 PF00005 ABC transporter AV743_19510 PF00005 ABC transporter AV743_19510 PF00664 ABC transporter transmembrane region AV743_19515 PF08173 Membrane bound YbgT-like protein AV743_19520 PF02322 Cytochrome bd terminal oxidase subunit II AV743_19525 PF01654 Cytochrome bd terminal oxidase subunit I AV743_19550 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19555 PF02515 CoA-transferase family III AV743_19565 PF03466 LysR substrate binding domain AV743_19565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_19570 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19580 PF10415 Fumarase C C-terminus AV743_19580 PF00206 Lyase AV743_19585 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AV743_19590 PF11741 AMIN domain AV743_19590 PF01520 N-acetylmuramoyl-L-alanine amidase AV743_19595 PF09335 SNARE associated Golgi protein AV743_19600 PF08676 MutL C terminal dimerisation domain AV743_19600 PF01119 DNA mismatch repair protein, C-terminal domain AV743_19610 PF02769 AIR synthase related protein, C-terminal domain AV743_19610 PF00586 AIR synthase related protein, N-terminal domain AV743_19615 PF00308 Bacterial dnaA protein AV743_19625 PF01743 Poly A polymerase head domain AV743_19625 PF12627 Probable RNA and SrmB- binding site of polymerase A AV743_19625 PF12626 Polymerase A arginine-rich C-terminus AV743_19630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AV743_19635 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV743_19650 PF03480 Bacterial extracellular solute-binding protein, family 7 AV743_19655 PF00392 Bacterial regulatory proteins, gntR family AV743_19655 PF07702 UTRA domain AV743_19665 PF02627 Carboxymuconolactone decarboxylase family AV743_19695 PF09518 HindIII restriction endonuclease AV743_19700 PF02355 Protein export membrane protein AV743_19700 PF07549 SecD/SecF GG Motif AV743_19705 PF01964 Radical SAM ThiC family AV743_19705 PF13667 ThiC-associated domain AV743_19710 PF00171 Aldehyde dehydrogenase family AV743_19715 PF01565 FAD binding domain AV743_19715 PF02913 FAD linked oxidases, C-terminal domain AV743_19740 PF02515 CoA-transferase family III AV743_19745 PF00378 Enoyl-CoA hydratase/isomerase AV743_19750 PF00682 HMGL-like AV743_19765 PF00378 Enoyl-CoA hydratase/isomerase AV743_19770 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19780 PF02515 CoA-transferase family III AV743_19785 PF02515 CoA-transferase family III AV743_19795 PF08241 Methyltransferase domain AV743_19805 PF00633 Helix-hairpin-helix motif AV743_19805 PF00730 HhH-GPD superfamily base excision DNA repair protein AV743_19805 PF14815 NUDIX domain AV743_19805 PF10576 Iron-sulfur binding domain of endonuclease III AV743_19815 PF03975 CheD chemotactic sensory transduction AV743_19820 PF18075 FtsX extracellular domain AV743_19825 PF00005 ABC transporter AV743_19830 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV743_19835 PF00528 Binding-protein-dependent transport system inner membrane component AV743_19840 PF00528 Binding-protein-dependent transport system inner membrane component AV743_19845 PF00005 ABC transporter AV743_19850 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AV743_19860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AV743_19865 PF07690 Major Facilitator Superfamily AV743_19875 PF02616 Segregation and condensation protein ScpA AV743_19880 PF02569 Pantoate-beta-alanine ligase AV743_19895 PF06750 Bacterial Peptidase A24 N-terminal domain AV743_19895 PF01478 Type IV leader peptidase family AV743_19900 PF01121 Dephospho-CoA kinase AV743_19905 PF07072 Cell division protein AV743_19910 PF13533 Biotin-lipoyl like AV743_19915 PF00873 AcrB/AcrD/AcrF family AV743_19920 PF00873 AcrB/AcrD/AcrF family AV743_19925 PF02321 Outer membrane efflux protein AV743_19945 PF00355 Rieske [2Fe-2S] domain AV743_19945 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AV743_19965 PF03401 Tripartite tricarboxylate transporter family receptor AV743_19970 PF00682 HMGL-like AV743_19985 PF02390 Putative methyltransferase AV743_19990 PF00561 alpha/beta hydrolase fold AV743_19995 PF02597 ThiS family AV743_19995 PF05690 Thiazole biosynthesis protein ThiG AV743_20000 PF01476 LysM domain AV743_20000 PF04972 BON domain AV743_20015 PF00701 Dihydrodipicolinate synthetase family AV743_20020 PF13185 GAF domain AV743_20025 PF00155 Aminotransferase class I and II AV743_20030 PF01040 UbiA prenyltransferase family AV743_20050 PF01274 Malate synthase AV743_20070 PF00005 ABC transporter AV743_20075 PF00528 Binding-protein-dependent transport system inner membrane component AV743_20085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_20085 PF03466 LysR substrate binding domain AV743_20095 PF00534 Glycosyl transferases group 1 AV743_20095 PF13439 Glycosyltransferase Family 4 AV743_20100 PF03401 Tripartite tricarboxylate transporter family receptor AV743_20110 PF03466 LysR substrate binding domain AV743_20110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV743_20120 PF03401 Tripartite tricarboxylate transporter family receptor AV743_20130 PF03328 HpcH/HpaI aldolase/citrate lyase family AV743_20140 PF00593 TonB dependent receptor AV743_20140 PF07715 TonB-dependent Receptor Plug Domain AV743_20145 PF00436 Single-strand binding protein family AV743_20150 PF07690 Major Facilitator Superfamily AV743_20155 PF17760 UvrA interaction domain AV743_20155 PF17755 UvrA DNA-binding domain AV743_20160 PF00043 Glutathione S-transferase, C-terminal domain AV743_20160 PF13417 Glutathione S-transferase, N-terminal domain AV743_20165 PF01966 HD domain AV743_20165 PF13286 Phosphohydrolase-associated domain AV743_20170 PF01761 3-dehydroquinate synthase AV743_20175 PF01202 Shikimate kinase AV743_20180 PF17092 Penicillin-binding protein OB-like domain AV743_20180 PF00912 Transglycosylase AV743_20180 PF00905 Penicillin binding protein transpeptidase domain AV743_20185 PF01491 Frataxin-like domain AV743_20190 PF13627 Prokaryotic lipoprotein-attachment site AV743_20195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AV743_20195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AV743_20200 PF01578 Cytochrome C assembly protein AV743_20205 PF05140 ResB-like family AV743_20210 PF00034 Cytochrome c AV743_20215 PF01926 50S ribosome-binding GTPase AV743_20220 PF00490 Delta-aminolevulinic acid dehydratase AV743_20225 PF00892 EamA-like transporter family AV743_20230 PF11412 Disulphide bond corrector protein DsbC AV743_20230 PF02683 Cytochrome C biogenesis protein transmembrane region AV743_20235 PF03091 CutA1 divalent ion tolerance protein AV743_20240 PF01230 HIT domain AV743_20245 PF01196 Ribosomal protein L17 AV743_20250 PF01000 RNA polymerase Rpb3/RpoA insert domain AV743_20250 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AV743_20250 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AV743_20255 PF00163 Ribosomal protein S4/S9 N-terminal domain AV743_20255 PF01479 S4 domain AV743_20260 PF00411 Ribosomal protein S11 AV743_20265 PF00416 Ribosomal protein S13/S18 AV743_20270 PF00444 Ribosomal protein L36 AV743_20275 PF01176 Translation initiation factor 1A / IF-1 AV743_20280 PF00344 SecY translocase AV743_20285 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AV743_20290 PF00327 Ribosomal protein L30p/L7e AV743_20295 PF03719 Ribosomal protein S5, C-terminal domain AV743_20295 PF00333 Ribosomal protein S5, N-terminal domain AV743_20300 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AV743_20305 PF00347 Ribosomal protein L6 AV743_20310 PF00410 Ribosomal protein S8 AV743_20315 PF00253 Ribosomal protein S14p/S29e AV743_20320 PF00673 ribosomal L5P family C-terminus AV743_20320 PF00281 Ribosomal protein L5 AV743_20325 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AV743_20330 PF00238 Ribosomal protein L14p/L23e AV743_20340 PF00171 Aldehyde dehydrogenase family AV743_20350 PF00366 Ribosomal protein S17 AV743_20355 PF00831 Ribosomal L29 protein AV743_20360 PF00252 Ribosomal protein L16p/L10e AV743_20365 PF07650 KH domain AV743_20365 PF00189 Ribosomal protein S3, C-terminal domain AV743_20370 PF00237 Ribosomal protein L22p/L17e AV743_20375 PF00203 Ribosomal protein S19 AV743_20380 PF00181 Ribosomal Proteins L2, RNA binding domain AV743_20380 PF03947 Ribosomal Proteins L2, C-terminal domain AV743_20385 PF00276 Ribosomal protein L23 AV743_20390 PF00573 Ribosomal protein L4/L1 family AV743_20395 PF00297 Ribosomal protein L3 AV743_20400 PF00338 Ribosomal protein S10p/S20e AV743_20405 PF03143 Elongation factor Tu C-terminal domain AV743_20405 PF03144 Elongation factor Tu domain 2 AV743_20405 PF00009 Elongation factor Tu GTP binding domain AV743_20410 PF00679 Elongation factor G C-terminus AV743_20410 PF03144 Elongation factor Tu domain 2 AV743_20410 PF14492 Elongation Factor G, domain II AV743_20410 PF03764 Elongation factor G, domain IV AV743_20410 PF00009 Elongation factor Tu GTP binding domain AV743_20415 PF00177 Ribosomal protein S7p/S5e AV743_20420 PF00164 Ribosomal protein S12/S23 AV743_20430 PF02254 TrkA-N domain AV743_20430 PF07885 Ion channel AV743_20440 PF01594 AI-2E family transporter AV743_20450 PF01467 Cytidylyltransferase-like AV743_20465 PF08543 Phosphomethylpyrimidine kinase AV743_20470 PF05690 Thiazole biosynthesis protein ThiG AV743_20475 PF01497 Periplasmic binding protein AV743_20480 PF07715 TonB-dependent Receptor Plug Domain AV743_20480 PF00593 TonB dependent receptor AV743_20485 PF00809 Pterin binding enzyme AV743_20485 PF02965 Vitamin B12 dependent methionine synthase, activation domain AV743_20485 PF02607 B12 binding domain AV743_20485 PF02310 B12 binding domain AV743_20485 PF02574 Homocysteine S-methyltransferase AV743_20505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AV743_20515 PF01062 Bestrophin, RFP-TM, chloride channel AV743_20520 PF01037 Lrp/AsnC ligand binding domain AV743_20525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV743_20525 PF00205 Thiamine pyrophosphate enzyme, central domain AV743_20525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV743_20535 PF00171 Aldehyde dehydrogenase family AV743_20545 PF00528 Binding-protein-dependent transport system inner membrane component AV743_20550 PF00005 ABC transporter AV743_20560 PF01131 DNA topoisomerase AV743_20560 PF01751 Toprim domain AV743_20575 PF04361 Protein of unknown function (DUF494) AV743_20580 PF07715 TonB-dependent Receptor Plug Domain AV743_20580 PF00593 TonB dependent receptor AV743_20590 PF16868 NMT1-like family AV743_20595 PF01168 Alanine racemase, N-terminal domain AV743_20595 PF14031 Putative serine dehydratase domain AV743_20600 PF03401 Tripartite tricarboxylate transporter family receptor AV743_20605 PF00202 Aminotransferase class-III AV743_20615 PF00364 Biotin-requiring enzyme AV743_20615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV743_20615 PF02785 Biotin carboxylase C-terminal domain AV743_20615 PF00289 Biotin carboxylase, N-terminal domain AV743_20620 PF01039 Carboxyl transferase domain AV743_20635 PF02770 Acyl-CoA dehydrogenase, middle domain AV743_20635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV743_20635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV743_20655 PF12146 Serine aminopeptidase, S33 AV743_20665 PF02426 Muconolactone delta-isomerase AV743_20670 PF01144 Coenzyme A transferase AV743_20675 PF01144 Coenzyme A transferase AV743_20680 PF09339 IclR helix-turn-helix domain AV743_20680 PF01614 Bacterial transcriptional regulator AV743_20690 PF02667 Short chain fatty acid transporter AV743_20695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV743_20695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV743_20700 PF03797 Autotransporter beta-domain AV743_20700 PF00082 Subtilase family AV743_20705 PF00311 Phosphoenolpyruvate carboxylase AV743_20710 PF06508 Queuosine biosynthesis protein QueC AV743_20730 PF06628 Catalase-related immune-responsive AV743_20730 PF00199 Catalase AV743_20735 PF00528 Binding-protein-dependent transport system inner membrane component AV743_20740 PF00005 ABC transporter AV743_20750 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AV743_20755 PF01546 Peptidase family M20/M25/M40 AV743_20755 PF07687 Peptidase dimerisation domain AV743_20760 PF00005 ABC transporter AV743_20760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_20765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV743_20765 PF00005 ABC transporter AV743_20770 PF00528 Binding-protein-dependent transport system inner membrane component AV743_20770 PF12911 N-terminal TM domain of oligopeptide transport permease C AV743_20775 PF00528 Binding-protein-dependent transport system inner membrane component AV743_20780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV743_20785 PF10396 GTP-binding protein TrmE N-terminus AV743_20785 PF12631 MnmE helical domain AV743_20785 PF01926 50S ribosome-binding GTPase AV743_20795 PF00072 Response regulator receiver domain AV743_20795 PF00486 Transcriptional regulatory protein, C terminal AV743_20800 PF00672 HAMP domain AV743_20800 PF00512 His Kinase A (phospho-acceptor) domain AV743_20800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV743_20815 PF01970 Tripartite tricarboxylate transporter TctA family AV743_20820 PF00155 Aminotransferase class I and II AV743_20825 PF00313 'Cold-shock' DNA-binding domain