locus-tag class description WU11_00005 PF13932 GidA associated domain WU11_00005 PF01134 Glucose inhibited division protein A WU11_00010 PF02527 rRNA small subunit methyltransferase G WU11_00015 PF13614 AAA domain WU11_00025 PF02195 ParB-like nuclease domain WU11_00025 PF17762 HTH domain found in ParB protein WU11_00030 PF17763 Glutaminase/Asparaginase C-terminal domain WU11_00030 PF00710 Asparaginase, N-terminal WU11_00035 PF00710 Asparaginase, N-terminal WU11_00035 PF17763 Glutaminase/Asparaginase C-terminal domain WU11_00055 PF03144 Elongation factor Tu domain 2 WU11_00055 PF03143 Elongation factor Tu C-terminal domain WU11_00055 PF00009 Elongation factor Tu GTP binding domain WU11_00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex WU11_00070 PF00467 KOW motif WU11_00070 PF02357 Transcription termination factor nusG WU11_00075 PF03946 Ribosomal protein L11, N-terminal domain WU11_00075 PF00298 Ribosomal protein L11, RNA binding domain WU11_00080 PF00687 Ribosomal protein L1p/L10e family WU11_00085 PF00466 Ribosomal protein L10 WU11_00090 PF00542 Ribosomal protein L7/L12 C-terminal domain WU11_00090 PF16320 Ribosomal protein L7/L12 dimerisation domain WU11_00095 PF00562 RNA polymerase Rpb2, domain 6 WU11_00095 PF10385 RNA polymerase beta subunit external 1 domain WU11_00095 PF04565 RNA polymerase Rpb2, domain 3 WU11_00095 PF04563 RNA polymerase beta subunit WU11_00095 PF04561 RNA polymerase Rpb2, domain 2 WU11_00095 PF04560 RNA polymerase Rpb2, domain 7 WU11_00100 PF04998 RNA polymerase Rpb1, domain 5 WU11_00100 PF04997 RNA polymerase Rpb1, domain 1 WU11_00100 PF00623 RNA polymerase Rpb1, domain 2 WU11_00100 PF04983 RNA polymerase Rpb1, domain 3 WU11_00100 PF05000 RNA polymerase Rpb1, domain 4 WU11_00130 PF00486 Transcriptional regulatory protein, C terminal WU11_00130 PF00072 Response regulator receiver domain WU11_00140 PF02515 CoA-transferase family III WU11_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_00160 PF03466 LysR substrate binding domain WU11_00165 PF00378 Enoyl-CoA hydratase/isomerase WU11_00185 PF02091 Glycyl-tRNA synthetase alpha subunit WU11_00190 PF02092 Glycyl-tRNA synthetase beta subunit WU11_00190 PF05746 DALR anticodon binding domain WU11_00200 PF01553 Acyltransferase WU11_00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WU11_00215 PF01327 Polypeptide deformylase WU11_00255 PF00561 alpha/beta hydrolase fold WU11_00260 PF00561 alpha/beta hydrolase fold WU11_00260 PF07021 Methionine biosynthesis protein MetW WU11_00270 PF07690 Major Facilitator Superfamily WU11_00280 PF01177 Asp/Glu/Hydantoin racemase WU11_00285 PF00005 ABC transporter WU11_00290 PF00528 Binding-protein-dependent transport system inner membrane component WU11_00295 PF00528 Binding-protein-dependent transport system inner membrane component WU11_00300 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_00340 PF00111 2Fe-2S iron-sulfur cluster binding domain WU11_00340 PF00970 Oxidoreductase FAD-binding domain WU11_00340 PF00175 Oxidoreductase NAD-binding domain WU11_00345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU11_00355 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_00380 PF00183 Hsp90 protein WU11_00380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_00385 PF00043 Glutathione S-transferase, C-terminal domain WU11_00385 PF13417 Glutathione S-transferase, N-terminal domain WU11_00390 PF01510 N-acetylmuramoyl-L-alanine amidase WU11_00400 PF01578 Cytochrome C assembly protein WU11_00405 PF00448 SRP54-type protein, GTPase domain WU11_00405 PF02881 SRP54-type protein, helical bundle domain WU11_00405 PF02978 Signal peptide binding domain WU11_00420 PF02719 Polysaccharide biosynthesis protein WU11_00430 PF10997 Alternate to MurJ WU11_00435 PF00862 Sucrose synthase WU11_00435 PF00534 Glycosyl transferases group 1 WU11_00440 PF02397 Bacterial sugar transferase WU11_00445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WU11_00455 PF02350 UDP-N-acetylglucosamine 2-epimerase WU11_00460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WU11_00465 PF00132 Bacterial transferase hexapeptide (six repeats) WU11_00470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WU11_00470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain WU11_00475 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WU11_00480 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) WU11_00480 PF00534 Glycosyl transferases group 1 WU11_00490 PF03309 Type III pantothenate kinase WU11_00500 PF02405 Permease MlaE WU11_00505 PF00005 ABC transporter WU11_00530 PF00768 D-alanyl-D-alanine carboxypeptidase WU11_00530 PF07943 Penicillin-binding protein 5, C-terminal domain WU11_00535 PF01063 Amino-transferase class IV WU11_00540 PF04359 Protein of unknown function (DUF493) WU11_00545 PF03099 Biotin/lipoate A/B protein ligase family WU11_00550 PF04055 Radical SAM superfamily WU11_00550 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family WU11_00555 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase WU11_00560 PF04321 RmlD substrate binding domain WU11_00565 PF16363 GDP-mannose 4,6 dehydratase WU11_00580 PF01053 Cys/Met metabolism PLP-dependent enzyme WU11_00585 PF01323 DSBA-like thioredoxin domain WU11_00585 PF00085 Thioredoxin WU11_00595 PF03485 Arginyl tRNA synthetase N terminal domain WU11_00595 PF05746 DALR anticodon binding domain WU11_00595 PF00750 tRNA synthetases class I (R) WU11_00615 PF00528 Binding-protein-dependent transport system inner membrane component WU11_00620 PF00528 Binding-protein-dependent transport system inner membrane component WU11_00625 PF13416 Bacterial extracellular solute-binding protein WU11_00630 PF17912 MalK OB fold domain WU11_00630 PF00005 ABC transporter WU11_00635 PF00149 Calcineurin-like phosphoesterase WU11_00645 PF00005 ABC transporter WU11_00645 PF12857 TOBE-like domain WU11_00650 PF00528 Binding-protein-dependent transport system inner membrane component WU11_00665 PF00356 Bacterial regulatory proteins, lacI family WU11_00675 PF01425 Amidase WU11_00680 PF08502 LeuA allosteric (dimerisation) domain WU11_00680 PF00682 HMGL-like WU11_00690 PF04552 Sigma-54, DNA binding domain WU11_00690 PF00309 Sigma-54 factor, Activator interacting domain (AID) WU11_00690 PF04963 Sigma-54 factor, core binding domain WU11_00700 PF03466 LysR substrate binding domain WU11_00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_00715 PF13609 Gram-negative porin WU11_00720 PF00291 Pyridoxal-phosphate dependent enzyme WU11_00720 PF00585 C-terminal regulatory domain of Threonine dehydratase WU11_00735 PF07729 FCD domain WU11_00735 PF00392 Bacterial regulatory proteins, gntR family WU11_00740 PF02515 CoA-transferase family III WU11_00750 PF00378 Enoyl-CoA hydratase/isomerase WU11_00755 PF01494 FAD binding domain WU11_00760 PF01494 FAD binding domain WU11_00765 PF03401 Tripartite tricarboxylate transporter family receptor WU11_00780 PF02626 Carboxyltransferase domain, subdomain A and B WU11_00785 PF02682 Carboxyltransferase domain, subdomain C and D WU11_00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_00795 PF03466 LysR substrate binding domain WU11_00800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU11_00800 PF01842 ACT domain WU11_00800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU11_00810 PF00512 His Kinase A (phospho-acceptor) domain WU11_00810 PF00672 HAMP domain WU11_00810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_00815 PF00072 Response regulator receiver domain WU11_00815 PF00486 Transcriptional regulatory protein, C terminal WU11_00820 PF11808 Phosphate regulon sensor protein PhoR WU11_00820 PF00989 PAS fold WU11_00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_00820 PF00512 His Kinase A (phospho-acceptor) domain WU11_00825 PF00486 Transcriptional regulatory protein, C terminal WU11_00825 PF00072 Response regulator receiver domain WU11_00835 PF00072 Response regulator receiver domain WU11_00835 PF00486 Transcriptional regulatory protein, C terminal WU11_00840 PF01209 ubiE/COQ5 methyltransferase family WU11_00855 PF03109 ABC1 family WU11_00875 PF04536 TPM domain WU11_00885 PF00271 Helicase conserved C-terminal domain WU11_00885 PF00270 DEAD/DEAH box helicase WU11_00890 PF01810 LysE type translocator WU11_00895 PF03144 Elongation factor Tu domain 2 WU11_00895 PF16658 Class II release factor RF3, C-terminal domain WU11_00895 PF00009 Elongation factor Tu GTP binding domain WU11_00905 PF00210 Ferritin-like domain WU11_00935 PF09334 tRNA synthetases class I (M) WU11_00935 PF01588 Putative tRNA binding domain WU11_00945 PF10609 NUBPL iron-transfer P-loop NTPase WU11_00960 PF00692 dUTPase WU11_00985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain WU11_00985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain WU11_00985 PF01276 Orn/Lys/Arg decarboxylase, major domain WU11_01000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WU11_01000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WU11_01005 PF02535 ZIP Zinc transporter WU11_01010 PF01571 Aminomethyltransferase folate-binding domain WU11_01010 PF08669 Glycine cleavage T-protein C-terminal barrel domain WU11_01015 PF01597 Glycine cleavage H-protein WU11_01020 PF02347 Glycine cleavage system P-protein WU11_01025 PF00392 Bacterial regulatory proteins, gntR family WU11_01025 PF07729 FCD domain WU11_01030 PF02515 CoA-transferase family III WU11_01060 PF12146 Serine aminopeptidase, S33 WU11_01070 PF02426 Muconolactone delta-isomerase WU11_01075 PF01144 Coenzyme A transferase WU11_01080 PF01144 Coenzyme A transferase WU11_01085 PF01614 Bacterial transcriptional regulator WU11_01085 PF09339 IclR helix-turn-helix domain WU11_01095 PF02667 Short chain fatty acid transporter WU11_01100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU11_01100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU11_01105 PF03797 Autotransporter beta-domain WU11_01105 PF00082 Subtilase family WU11_01110 PF00311 Phosphoenolpyruvate carboxylase WU11_01115 PF06508 Queuosine biosynthesis protein QueC WU11_01140 PF02913 FAD linked oxidases, C-terminal domain WU11_01140 PF01565 FAD binding domain WU11_01145 PF00171 Aldehyde dehydrogenase family WU11_01150 PF01964 Radical SAM ThiC family WU11_01150 PF13667 ThiC-associated domain WU11_01155 PF07549 SecD/SecF GG Motif WU11_01155 PF02355 Protein export membrane protein WU11_01160 PF09518 HindIII restriction endonuclease WU11_01190 PF02627 Carboxymuconolactone decarboxylase family WU11_01195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU11_01195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU11_01200 PF00392 Bacterial regulatory proteins, gntR family WU11_01200 PF07702 UTRA domain WU11_01205 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_01210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU11_01220 PF03401 Tripartite tricarboxylate transporter family receptor WU11_01225 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WU11_01230 PF01743 Poly A polymerase head domain WU11_01230 PF12626 Polymerase A arginine-rich C-terminus WU11_01230 PF12627 Probable RNA and SrmB- binding site of polymerase A WU11_01240 PF00308 Bacterial dnaA protein WU11_01245 PF02769 AIR synthase related protein, C-terminal domain WU11_01245 PF00586 AIR synthase related protein, N-terminal domain WU11_01255 PF01119 DNA mismatch repair protein, C-terminal domain WU11_01255 PF08676 MutL C terminal dimerisation domain WU11_01260 PF09335 SNARE associated Golgi protein WU11_01265 PF11741 AMIN domain WU11_01265 PF01520 N-acetylmuramoyl-L-alanine amidase WU11_01270 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE WU11_01275 PF10415 Fumarase C C-terminus WU11_01275 PF00206 Lyase WU11_01285 PF03401 Tripartite tricarboxylate transporter family receptor WU11_01290 PF03466 LysR substrate binding domain WU11_01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_01300 PF02515 CoA-transferase family III WU11_01305 PF03401 Tripartite tricarboxylate transporter family receptor WU11_01330 PF01654 Cytochrome bd terminal oxidase subunit I WU11_01335 PF02322 Cytochrome bd terminal oxidase subunit II WU11_01340 PF08173 Membrane bound YbgT-like protein WU11_01345 PF00005 ABC transporter WU11_01345 PF00664 ABC transporter transmembrane region WU11_01350 PF00664 ABC transporter transmembrane region WU11_01350 PF00005 ABC transporter WU11_01355 PF00156 Phosphoribosyl transferase domain WU11_01395 PF04386 Stringent starvation protein B WU11_01400 PF02798 Glutathione S-transferase, N-terminal domain WU11_01400 PF00043 Glutathione S-transferase, C-terminal domain WU11_01405 PF02167 Cytochrome C1 family WU11_01410 PF00032 Cytochrome b(C-terminal)/b6/petD WU11_01410 PF00033 Cytochrome b/b6/petB WU11_01415 PF00355 Rieske [2Fe-2S] domain WU11_01415 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WU11_01420 PF01741 Large-conductance mechanosensitive channel, MscL WU11_01425 PF01784 NIF3 (NGG1p interacting factor 3) WU11_01430 PF13180 PDZ domain WU11_01440 PF04299 Putative FMN-binding domain WU11_01445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU11_01450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_01455 PF07859 alpha/beta hydrolase fold WU11_01465 PF00682 HMGL-like WU11_01465 PF08502 LeuA allosteric (dimerisation) domain WU11_01470 PF12833 Helix-turn-helix domain WU11_01475 PF00920 Dehydratase family WU11_01480 PF07690 Major Facilitator Superfamily WU11_01485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_01485 PF03466 LysR substrate binding domain WU11_01495 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) WU11_01525 PF07859 alpha/beta hydrolase fold WU11_01535 PF02653 Branched-chain amino acid transport system / permease component WU11_01540 PF11862 Domain of unknown function (DUF3382) WU11_01540 PF02653 Branched-chain amino acid transport system / permease component WU11_01545 PF00005 ABC transporter WU11_01545 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_01550 PF00005 ABC transporter WU11_01565 PF00378 Enoyl-CoA hydratase/isomerase WU11_01570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_01570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_01570 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_01575 PF00501 AMP-binding enzyme WU11_01575 PF13193 AMP-binding enzyme C-terminal domain WU11_01595 PF00202 Aminotransferase class-III WU11_01600 PF02581 Thiamine monophosphate synthase WU11_01605 PF08543 Phosphomethylpyrimidine kinase WU11_01610 PF00301 Rubredoxin WU11_01615 PF02622 Uncharacterized ACR, COG1678 WU11_01620 PF03652 Holliday junction resolvase WU11_01625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WU11_01625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WU11_01630 PF01979 Amidohydrolase family WU11_01635 PF01553 Acyltransferase WU11_01640 PF00149 Calcineurin-like phosphoesterase WU11_01650 PF00912 Transglycosylase WU11_01665 PF00501 AMP-binding enzyme WU11_01665 PF13193 AMP-binding enzyme C-terminal domain WU11_01670 PF03401 Tripartite tricarboxylate transporter family receptor WU11_01685 PF12706 Beta-lactamase superfamily domain WU11_01690 PF03401 Tripartite tricarboxylate transporter family receptor WU11_01710 PF00990 Diguanylate cyclase, GGDEF domain WU11_01710 PF03707 Bacterial signalling protein N terminal repeat WU11_01710 PF00563 EAL domain WU11_01715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WU11_01715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WU11_01720 PF13532 2OG-Fe(II) oxygenase superfamily WU11_01725 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA WU11_01730 PF04463 Protein of unknown function (DUF523) WU11_01735 PF00005 ABC transporter WU11_01740 PF01032 FecCD transport family WU11_01745 PF01497 Periplasmic binding protein WU11_01750 PF05171 Haemin-degrading HemS.ChuX domain WU11_01755 PF00593 TonB dependent receptor WU11_01755 PF04886 PT repeat WU11_01755 PF07715 TonB-dependent Receptor Plug Domain WU11_01760 PF16220 Domain of unknown function (DUF4880) WU11_01760 PF04773 FecR protein WU11_01765 PF08281 Sigma-70, region 4 WU11_01765 PF04542 Sigma-70 region 2 WU11_01790 PF02423 Ornithine cyclodeaminase/mu-crystallin family WU11_01800 PF07729 FCD domain WU11_01800 PF00392 Bacterial regulatory proteins, gntR family WU11_01820 PF00171 Aldehyde dehydrogenase family WU11_01830 PF00970 Oxidoreductase FAD-binding domain WU11_01830 PF00175 Oxidoreductase NAD-binding domain WU11_01830 PF00111 2Fe-2S iron-sulfur cluster binding domain WU11_01855 PF03458 UPF0126 domain WU11_01860 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WU11_01860 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WU11_01865 PF03372 Endonuclease/Exonuclease/phosphatase family WU11_01870 PF00156 Phosphoribosyl transferase domain WU11_01875 PF02637 GatB domain WU11_01875 PF02934 GatB/GatE catalytic domain WU11_01880 PF01425 Amidase WU11_01885 PF02686 Glu-tRNAGln amidotransferase C subunit WU11_01895 PF04085 rod shape-determining protein MreC WU11_01905 PF03717 Penicillin-binding Protein dimerisation domain WU11_01905 PF00905 Penicillin binding protein transpeptidase domain WU11_01910 PF01098 Cell cycle protein WU11_01915 PF02615 Malate/L-lactate dehydrogenase WU11_01920 PF00939 Sodium:sulfate symporter transmembrane region WU11_01925 PF00440 Bacterial regulatory proteins, tetR family WU11_01935 PF00696 Amino acid kinase family WU11_01940 PF03180 NLPA lipoprotein WU11_01945 PF00578 AhpC/TSA family WU11_01950 PF04972 BON domain WU11_01955 PF13580 SIS domain WU11_01960 PF02021 Uncharacterised protein family UPF0102 WU11_01965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WU11_01970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WU11_01970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WU11_01990 PF02515 CoA-transferase family III WU11_01995 PF03401 Tripartite tricarboxylate transporter family receptor WU11_02000 PF02515 CoA-transferase family III WU11_02020 PF09339 IclR helix-turn-helix domain WU11_02025 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_02040 PF00378 Enoyl-CoA hydratase/isomerase WU11_02040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU11_02040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU11_02045 PF02515 CoA-transferase family III WU11_02050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_02050 PF00205 Thiamine pyrophosphate enzyme, central domain WU11_02050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_02055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_02055 PF03466 LysR substrate binding domain WU11_02065 PF03401 Tripartite tricarboxylate transporter family receptor WU11_02075 PF03401 Tripartite tricarboxylate transporter family receptor WU11_02085 PF00892 EamA-like transporter family WU11_02090 PF01810 LysE type translocator WU11_02095 PF12146 Serine aminopeptidase, S33 WU11_02110 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase WU11_02115 PF00535 Glycosyl transferase family 2 WU11_02130 PF03616 Sodium/glutamate symporter WU11_02140 PF02667 Short chain fatty acid transporter WU11_02155 PF00929 Exonuclease WU11_02170 PF03144 Elongation factor Tu domain 2 WU11_02170 PF03764 Elongation factor G, domain IV WU11_02170 PF14492 Elongation Factor G, domain II WU11_02170 PF00679 Elongation factor G C-terminus WU11_02170 PF00009 Elongation factor Tu GTP binding domain WU11_02175 PF00582 Universal stress protein family WU11_02185 PF00155 Aminotransferase class I and II WU11_02185 PF00392 Bacterial regulatory proteins, gntR family WU11_02195 PF02308 MgtC family WU11_02200 PF03741 Integral membrane protein TerC family WU11_02200 PF03471 Transporter associated domain WU11_02205 PF02515 CoA-transferase family III WU11_02210 PF00378 Enoyl-CoA hydratase/isomerase WU11_02215 PF03401 Tripartite tricarboxylate transporter family receptor WU11_02220 PF03466 LysR substrate binding domain WU11_02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_02225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_02225 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_02225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_02235 PF00108 Thiolase, N-terminal domain WU11_02235 PF02803 Thiolase, C-terminal domain WU11_02255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_02255 PF03466 LysR substrate binding domain WU11_02260 PF00313 'Cold-shock' DNA-binding domain WU11_02270 PF00392 Bacterial regulatory proteins, gntR family WU11_02270 PF07729 FCD domain WU11_02275 PF00171 Aldehyde dehydrogenase family WU11_02280 PF02667 Short chain fatty acid transporter WU11_02285 PF00175 Oxidoreductase NAD-binding domain WU11_02285 PF00970 Oxidoreductase FAD-binding domain WU11_02285 PF00042 Globin WU11_02290 PF01042 Endoribonuclease L-PSP WU11_02295 PF03466 LysR substrate binding domain WU11_02295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_02315 PF02515 CoA-transferase family III WU11_02325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_02325 PF03466 LysR substrate binding domain WU11_02330 PF02515 CoA-transferase family III WU11_02340 PF01794 Ferric reductase like transmembrane component WU11_02345 PF00174 Oxidoreductase molybdopterin binding domain WU11_02350 PF13419 Haloacid dehalogenase-like hydrolase WU11_02355 PF01479 S4 domain WU11_02355 PF00849 RNA pseudouridylate synthase WU11_02360 PF00575 S1 RNA binding domain WU11_02360 PF10150 Ribonuclease E/G family WU11_02360 PF12111 Polyribonucleotide phosphorylase C terminal WU11_02380 PF01039 Carboxyl transferase domain WU11_02380 PF17848 Acetyl-coA carboxylase zinc finger domain WU11_02385 PF00290 Tryptophan synthase alpha chain WU11_02390 PF00291 Pyridoxal-phosphate dependent enzyme WU11_02395 PF01546 Peptidase family M20/M25/M40 WU11_02395 PF07687 Peptidase dimerisation domain WU11_02400 PF04607 Region found in RelA / SpoT proteins WU11_02400 PF02824 TGS domain WU11_02400 PF13291 ACT domain WU11_02405 PF06167 Glucose-regulated metallo-peptidase M90 WU11_02415 PF01042 Endoribonuclease L-PSP WU11_02420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family WU11_02420 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain WU11_02425 PF00037 4Fe-4S binding domain WU11_02425 PF11953 Domain of unknown function (DUF3470) WU11_02430 PF00175 Oxidoreductase NAD-binding domain WU11_02430 PF00970 Oxidoreductase FAD-binding domain WU11_02440 PF04060 Putative Fe-S cluster WU11_02445 PF00633 Helix-hairpin-helix motif WU11_02445 PF00730 HhH-GPD superfamily base excision DNA repair protein WU11_02445 PF10576 Iron-sulfur binding domain of endonuclease III WU11_02450 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_02450 PF00005 ABC transporter WU11_02455 PF00005 ABC transporter WU11_02465 PF02653 Branched-chain amino acid transport system / permease component WU11_02480 PF01063 Amino-transferase class IV WU11_02485 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_02485 PF00005 ABC transporter WU11_02500 PF02632 BioY family WU11_02505 PF02361 Cobalt transport protein WU11_02510 PF00005 ABC transporter WU11_02515 PF01641 SelR domain WU11_02520 PF04279 Intracellular septation protein A WU11_02535 PF12826 Helix-hairpin-helix motif WU11_02535 PF03120 NAD-dependent DNA ligase OB-fold domain WU11_02535 PF01653 NAD-dependent DNA ligase adenylation domain WU11_02535 PF00533 BRCA1 C Terminus (BRCT) domain WU11_02535 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WU11_02545 PF06470 SMC proteins Flexible Hinge Domain WU11_02545 PF02463 RecF/RecN/SMC N terminal domain WU11_02550 PF07690 Major Facilitator Superfamily WU11_02555 PF03167 Uracil DNA glycosylase superfamily WU11_02560 PF00814 Glycoprotease family WU11_02565 PF00072 Response regulator receiver domain WU11_02565 PF00486 Transcriptional regulatory protein, C terminal WU11_02575 PF00672 HAMP domain WU11_02575 PF00512 His Kinase A (phospho-acceptor) domain WU11_02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_02580 PF00578 AhpC/TSA family WU11_02585 PF02627 Carboxymuconolactone decarboxylase family WU11_02605 PF00392 Bacterial regulatory proteins, gntR family WU11_02605 PF07729 FCD domain WU11_02620 PF03401 Tripartite tricarboxylate transporter family receptor WU11_02625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU11_02625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU11_02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_02635 PF03466 LysR substrate binding domain WU11_02645 PF00202 Aminotransferase class-III WU11_02650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WU11_02650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WU11_02655 PF00764 Arginosuccinate synthase WU11_02660 PF02705 K+ potassium transporter WU11_02665 PF08521 Two-component sensor kinase N-terminal WU11_02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_02665 PF00512 His Kinase A (phospho-acceptor) domain WU11_02670 PF00072 Response regulator receiver domain WU11_02670 PF00486 Transcriptional regulatory protein, C terminal WU11_02675 PF02472 Biopolymer transport protein ExbD/TolR WU11_02680 PF01618 MotA/TolQ/ExbB proton channel family WU11_02695 PF00216 Bacterial DNA-binding protein WU11_02700 PF18331 PKHD-type hydroxylase C-terminal domain WU11_02700 PF13640 2OG-Fe(II) oxygenase superfamily WU11_02705 PF01053 Cys/Met metabolism PLP-dependent enzyme WU11_02710 PF08032 RNA 2'-O ribose methyltransferase substrate binding WU11_02710 PF00588 SpoU rRNA Methylase family WU11_02715 PF00575 S1 RNA binding domain WU11_02715 PF08461 Ribonuclease R winged-helix domain WU11_02715 PF17876 Cold shock domain WU11_02715 PF08206 Ribonuclease B OB domain WU11_02715 PF00773 RNB domain WU11_02735 PF13673 Acetyltransferase (GNAT) domain WU11_02740 PF03547 Membrane transport protein WU11_02745 PF04143 Sulphur transport WU11_02750 PF01645 Conserved region in glutamate synthase WU11_02760 PF13091 PLD-like domain WU11_02760 PF13396 Phospholipase_D-nuclease N-terminal WU11_02770 PF10017 Histidine-specific methyltransferase, SAM-dependent WU11_02805 PF00072 Response regulator receiver domain WU11_02810 PF00990 Diguanylate cyclase, GGDEF domain WU11_02835 PF03466 LysR substrate binding domain WU11_02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_02845 PF00890 FAD binding domain WU11_02865 PF00166 Chaperonin 10 Kd subunit WU11_02870 PF00118 TCP-1/cpn60 chaperonin family WU11_02875 PF03797 Autotransporter beta-domain WU11_02875 PF03212 Pertactin WU11_02880 PF03631 Virulence factor BrkB WU11_02885 PF01219 Prokaryotic diacylglycerol kinase WU11_02890 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_02895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WU11_02900 PF18146 Damage-inducible protein CinA KH domain WU11_02900 PF02464 Competence-damaged protein WU11_02900 PF00994 Probable molybdopterin binding domain WU11_02905 PF04608 Phosphatidylglycerophosphatase A WU11_02910 PF00586 AIR synthase related protein, N-terminal domain WU11_02910 PF02769 AIR synthase related protein, C-terminal domain WU11_02915 PF01029 NusB family WU11_02920 PF00885 6,7-dimethyl-8-ribityllumazine synthase WU11_02925 PF00925 GTP cyclohydrolase II WU11_02925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WU11_02960 PF00528 Binding-protein-dependent transport system inner membrane component WU11_02965 PF00528 Binding-protein-dependent transport system inner membrane component WU11_02980 PF00448 SRP54-type protein, GTPase domain WU11_02980 PF02881 SRP54-type protein, helical bundle domain WU11_02990 PF01467 Cytidylyltransferase-like WU11_02995 PF00037 4Fe-4S binding domain WU11_03000 PF03594 Benzoate membrane transport protein WU11_03015 PF01022 Bacterial regulatory protein, arsR family WU11_03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_03030 PF03466 LysR substrate binding domain WU11_03045 PF00005 ABC transporter WU11_03045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_03050 PF00528 Binding-protein-dependent transport system inner membrane component WU11_03055 PF00528 Binding-protein-dependent transport system inner membrane component WU11_03065 PF00390 Malic enzyme, N-terminal domain WU11_03065 PF03949 Malic enzyme, NAD binding domain WU11_03065 PF01515 Phosphate acetyl/butaryl transferase WU11_03070 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WU11_03075 PF03401 Tripartite tricarboxylate transporter family receptor WU11_03080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_03080 PF00205 Thiamine pyrophosphate enzyme, central domain WU11_03080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_03085 PF00392 Bacterial regulatory proteins, gntR family WU11_03085 PF07729 FCD domain WU11_03125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_03125 PF03466 LysR substrate binding domain WU11_03135 PF04377 Arginine-tRNA-protein transferase, C terminus WU11_03135 PF04376 Arginine-tRNA-protein transferase, N terminus WU11_03140 PF01180 Dihydroorotate dehydrogenase WU11_03150 PF03401 Tripartite tricarboxylate transporter family receptor WU11_03155 PF18807 Tripartite Tc toxins repeat WU11_03155 PF05785 Rho-activating domain of cytotoxic necrotizing factor WU11_03160 PF01614 Bacterial transcriptional regulator WU11_03160 PF09339 IclR helix-turn-helix domain WU11_03165 PF02464 Competence-damaged protein WU11_03165 PF00994 Probable molybdopterin binding domain WU11_03165 PF18146 Damage-inducible protein CinA KH domain WU11_03185 PF00270 DEAD/DEAH box helicase WU11_03185 PF00271 Helicase conserved C-terminal domain WU11_03200 PF01063 Amino-transferase class IV WU11_03215 PF00561 alpha/beta hydrolase fold WU11_03220 PF01435 Peptidase family M48 WU11_03220 PF13181 Tetratricopeptide repeat WU11_03225 PF00483 Nucleotidyl transferase WU11_03235 PF13609 Gram-negative porin WU11_03260 PF05195 Aminopeptidase P, N-terminal domain WU11_03260 PF00557 Metallopeptidase family M24 WU11_03270 PF01494 FAD binding domain WU11_03275 PF01207 Dihydrouridine synthase (Dus) WU11_03280 PF02954 Bacterial regulatory protein, Fis family WU11_03285 PF02142 MGS-like domain WU11_03285 PF01808 AICARFT/IMPCHase bienzyme WU11_03290 PF02075 Crossover junction endodeoxyribonuclease RuvC WU11_03295 PF01330 RuvA N terminal domain WU11_03295 PF07499 RuvA, C-terminal domain WU11_03300 PF01370 NAD dependent epimerase/dehydratase family WU11_03305 PF00291 Pyridoxal-phosphate dependent enzyme WU11_03310 PF05496 Holliday junction DNA helicase RuvB P-loop domain WU11_03310 PF05491 RuvB C-terminal winged helix domain WU11_03310 PF17864 RuvB AAA lid domain WU11_03315 PF16124 RecQ zinc-binding WU11_03315 PF09382 RQC domain WU11_03315 PF00270 DEAD/DEAH box helicase WU11_03315 PF00570 HRDC domain WU11_03315 PF00271 Helicase conserved C-terminal domain WU11_03330 PF00484 Carbonic anhydrase WU11_03335 PF01425 Amidase WU11_03340 PF13458 Periplasmic binding protein WU11_03345 PF02653 Branched-chain amino acid transport system / permease component WU11_03350 PF02653 Branched-chain amino acid transport system / permease component WU11_03355 PF00005 ABC transporter WU11_03355 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_03360 PF00005 ABC transporter WU11_03365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WU11_03365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WU11_03375 PF03180 NLPA lipoprotein WU11_03515 PF06791 Prophage tail length tape measure protein WU11_03580 PF02586 SOS response associated peptidase (SRAP) WU11_03590 PF00486 Transcriptional regulatory protein, C terminal WU11_03590 PF00072 Response regulator receiver domain WU11_03595 PF00293 NUDIX domain WU11_03600 PF03129 Anticodon binding domain WU11_03600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WU11_03600 PF04073 Aminoacyl-tRNA editing domain WU11_03605 PF03061 Thioesterase superfamily WU11_03610 PF01618 MotA/TolQ/ExbB proton channel family WU11_03615 PF02472 Biopolymer transport protein ExbD/TolR WU11_03625 PF07676 WD40-like Beta Propeller Repeat WU11_03625 PF04052 TolB amino-terminal domain WU11_03630 PF00691 OmpA family WU11_03640 PF01032 FecCD transport family WU11_03645 PF00005 ABC transporter WU11_03650 PF03401 Tripartite tricarboxylate transporter family receptor WU11_03655 PF03401 Tripartite tricarboxylate transporter family receptor WU11_03675 PF07670 Nucleoside recognition WU11_03680 PF00224 Pyruvate kinase, barrel domain WU11_03680 PF02887 Pyruvate kinase, alpha/beta domain WU11_03685 PF02595 Glycerate kinase family WU11_03690 PF00398 Ribosomal RNA adenine dimethylase WU11_03695 PF09312 SurA N-terminal domain WU11_03695 PF00639 PPIC-type PPIASE domain WU11_03700 PF04453 LPS transport system D WU11_03705 PF01636 Phosphotransferase enzyme family WU11_03710 PF00483 Nucleotidyl transferase WU11_03720 PF01329 Pterin 4 alpha carbinolamine dehydratase WU11_03745 PF00202 Aminotransferase class-III WU11_03750 PF01425 Amidase WU11_03755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_03755 PF00005 ABC transporter WU11_03760 PF00528 Binding-protein-dependent transport system inner membrane component WU11_03765 PF00528 Binding-protein-dependent transport system inner membrane component WU11_03770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_03790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WU11_03795 PF16653 Saccharopine dehydrogenase C-terminal domain WU11_03795 PF03435 Saccharopine dehydrogenase NADP binding domain WU11_03810 PF04264 YceI-like domain WU11_03815 PF07715 TonB-dependent Receptor Plug Domain WU11_03815 PF00593 TonB dependent receptor WU11_03820 PF04773 FecR protein WU11_03820 PF16220 Domain of unknown function (DUF4880) WU11_03860 PF01472 PUA domain WU11_03860 PF00696 Amino acid kinase family WU11_03865 PF01018 GTP1/OBG WU11_03865 PF01926 50S ribosome-binding GTPase WU11_03870 PF01016 Ribosomal L27 protein WU11_03875 PF00829 Ribosomal prokaryotic L21 protein WU11_03885 PF00348 Polyprenyl synthetase WU11_03895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_03895 PF03466 LysR substrate binding domain WU11_03900 PF01968 Hydantoinase/oxoprolinase WU11_03900 PF05378 Hydantoinase/oxoprolinase N-terminal region WU11_03905 PF02538 Hydantoinase B/oxoprolinase WU11_03910 PF01266 FAD dependent oxidoreductase WU11_03920 PF00171 Aldehyde dehydrogenase family WU11_03925 PF02794 RTX toxin acyltransferase family WU11_03935 PF02382 N-terminal domain in RTX protein WU11_03935 PF03497 Anthrax toxin LF subunit WU11_03935 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) WU11_03940 PF00005 ABC transporter WU11_03940 PF00664 ABC transporter transmembrane region WU11_03940 PF03412 Peptidase C39 family WU11_03945 PF13533 Biotin-lipoyl like WU11_03950 PF02321 Outer membrane efflux protein WU11_03960 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_03970 PF00528 Binding-protein-dependent transport system inner membrane component WU11_03975 PF00005 ABC transporter WU11_03980 PF01063 Amino-transferase class IV WU11_04000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_04000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_04000 PF00205 Thiamine pyrophosphate enzyme, central domain WU11_04005 PF07729 FCD domain WU11_04005 PF00392 Bacterial regulatory proteins, gntR family WU11_04015 PF07729 FCD domain WU11_04015 PF00392 Bacterial regulatory proteins, gntR family WU11_04020 PF08240 Alcohol dehydrogenase GroES-like domain WU11_04020 PF00107 Zinc-binding dehydrogenase WU11_04025 PF13193 AMP-binding enzyme C-terminal domain WU11_04025 PF00501 AMP-binding enzyme WU11_04035 PF00528 Binding-protein-dependent transport system inner membrane component WU11_04040 PF00005 ABC transporter WU11_04045 PF09084 NMT1/THI5 like WU11_04055 PF00205 Thiamine pyrophosphate enzyme, central domain WU11_04055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_04055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_04075 PF17432 Domain of unknown function (DUF3458_C) ARM repeats WU11_04075 PF11940 Domain of unknown function (DUF3458) Ig-like fold WU11_04075 PF01433 Peptidase family M1 domain WU11_04080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain WU11_04090 PF02542 YgbB family WU11_04095 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WU11_04100 PF03461 TRCF domain WU11_04100 PF17757 UvrB interaction domain WU11_04100 PF02559 CarD-like/TRCF domain WU11_04100 PF00270 DEAD/DEAH box helicase WU11_04100 PF00271 Helicase conserved C-terminal domain WU11_04110 PF03466 LysR substrate binding domain WU11_04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_04115 PF03401 Tripartite tricarboxylate transporter family receptor WU11_04120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_04120 PF00205 Thiamine pyrophosphate enzyme, central domain WU11_04120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_04135 PF00593 TonB dependent receptor WU11_04135 PF07715 TonB-dependent Receptor Plug Domain WU11_04140 PF07715 TonB-dependent Receptor Plug Domain WU11_04140 PF00593 TonB dependent receptor WU11_04150 PF00361 Proton-conducting membrane transporter WU11_04155 PF00361 Proton-conducting membrane transporter WU11_04155 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus WU11_04160 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WU11_04160 PF00361 Proton-conducting membrane transporter WU11_04165 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WU11_04170 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WU11_04175 PF12838 4Fe-4S dicluster domain WU11_04180 PF00146 NADH dehydrogenase WU11_04185 PF00384 Molybdopterin oxidoreductase WU11_04185 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WU11_04185 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WU11_04190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WU11_04190 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WU11_04190 PF10531 SLBB domain WU11_04200 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WU11_04205 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WU11_04210 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WU11_04215 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WU11_04220 PF13609 Gram-negative porin WU11_04245 PF01569 PAP2 superfamily WU11_04255 PF00781 Diacylglycerol kinase catalytic domain WU11_04260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_04260 PF03466 LysR substrate binding domain WU11_04265 PF02028 BCCT, betaine/carnitine/choline family transporter WU11_04275 PF01638 HxlR-like helix-turn-helix WU11_04280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU11_04285 PF00873 AcrB/AcrD/AcrF family WU11_04290 PF02321 Outer membrane efflux protein WU11_04300 PF00127 Copper binding proteins, plastocyanin/azurin family WU11_04310 PF05378 Hydantoinase/oxoprolinase N-terminal region WU11_04310 PF01968 Hydantoinase/oxoprolinase WU11_04320 PF01266 FAD dependent oxidoreductase WU11_04325 PF03401 Tripartite tricarboxylate transporter family receptor WU11_04340 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WU11_04345 PF01053 Cys/Met metabolism PLP-dependent enzyme WU11_04350 PF03466 LysR substrate binding domain WU11_04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_04365 PF03401 Tripartite tricarboxylate transporter family receptor WU11_04370 PF00206 Lyase WU11_04370 PF14698 Argininosuccinate lyase C-terminal WU11_04385 PF03401 Tripartite tricarboxylate transporter family receptor WU11_04390 PF07476 Methylaspartate ammonia-lyase C-terminus WU11_04390 PF05034 Methylaspartate ammonia-lyase N-terminus WU11_04400 PF02028 BCCT, betaine/carnitine/choline family transporter WU11_04410 PF03840 Preprotein translocase SecG subunit WU11_04415 PF00121 Triosephosphate isomerase WU11_04420 PF00550 Phosphopantetheine attachment site WU11_04420 PF14765 Polyketide synthase dehydratase WU11_04420 PF08990 Erythronolide synthase docking WU11_04420 PF02801 Beta-ketoacyl synthase, C-terminal domain WU11_04420 PF16197 Ketoacyl-synthetase C-terminal extension WU11_04420 PF00109 Beta-ketoacyl synthase, N-terminal domain WU11_04420 PF08240 Alcohol dehydrogenase GroES-like domain WU11_04420 PF08659 KR domain WU11_04420 PF00698 Acyl transferase domain WU11_04435 PF13291 ACT domain WU11_04435 PF00291 Pyridoxal-phosphate dependent enzyme WU11_04450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WU11_04450 PF03725 3' exoribonuclease family, domain 2 WU11_04450 PF00013 KH domain WU11_04450 PF01138 3' exoribonuclease family, domain 1 WU11_04450 PF00575 S1 RNA binding domain WU11_04455 PF00312 Ribosomal protein S15 WU11_04465 PF01066 CDP-alcohol phosphatidyltransferase WU11_04470 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain WU11_04470 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain WU11_04475 PF10369 Small subunit of acetolactate synthase WU11_04480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_04480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_04480 PF00205 Thiamine pyrophosphate enzyme, central domain WU11_04500 PF00664 ABC transporter transmembrane region WU11_04500 PF00005 ABC transporter WU11_04505 PF05724 Thiopurine S-methyltransferase (TPMT) WU11_04520 PF07317 Flagellar regulator YcgR WU11_04520 PF07238 PilZ domain WU11_04540 PF01966 HD domain WU11_04550 PF00364 Biotin-requiring enzyme WU11_04555 PF00682 HMGL-like WU11_04555 PF00364 Biotin-requiring enzyme WU11_04555 PF02436 Conserved carboxylase domain WU11_04575 PF07702 UTRA domain WU11_04575 PF00392 Bacterial regulatory proteins, gntR family WU11_04580 PF00289 Biotin carboxylase, N-terminal domain WU11_04580 PF02785 Biotin carboxylase C-terminal domain WU11_04580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU11_04630 PF00664 ABC transporter transmembrane region WU11_04630 PF00005 ABC transporter WU11_04635 PF00248 Aldo/keto reductase family WU11_04640 PF00248 Aldo/keto reductase family WU11_04655 PF00149 Calcineurin-like phosphoesterase WU11_04660 PF00912 Transglycosylase WU11_04660 PF17092 Penicillin-binding protein OB-like domain WU11_04660 PF00905 Penicillin binding protein transpeptidase domain WU11_04665 PF00326 Prolyl oligopeptidase family WU11_04675 PF11799 impB/mucB/samB family C-terminal domain WU11_04675 PF00817 impB/mucB/samB family WU11_04675 PF11798 IMS family HHH motif WU11_04685 PF03401 Tripartite tricarboxylate transporter family receptor WU11_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_04690 PF03466 LysR substrate binding domain WU11_04710 PF07690 Major Facilitator Superfamily WU11_04715 PF13419 Haloacid dehalogenase-like hydrolase WU11_04725 PF00691 OmpA family WU11_04730 PF00521 DNA gyrase/topoisomerase IV, subunit A WU11_04730 PF03989 DNA gyrase C-terminal domain, beta-propeller WU11_04735 PF00266 Aminotransferase class-V WU11_04740 PF00800 Prephenate dehydratase WU11_04740 PF01842 ACT domain WU11_04740 PF01817 Chorismate mutase type II WU11_04745 PF02153 Prephenate dehydrogenase WU11_04750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WU11_04755 PF02224 Cytidylate kinase WU11_04760 PF00575 S1 RNA binding domain WU11_04765 PF00216 Bacterial DNA-binding protein WU11_04775 PF18073 Rubredoxin metal binding domain WU11_04785 PF01370 NAD dependent epimerase/dehydratase family WU11_04790 PF10531 SLBB domain WU11_04800 PF00291 Pyridoxal-phosphate dependent enzyme WU11_04805 PF13406 Transglycosylase SLT domain WU11_04810 PF00850 Histone deacetylase domain WU11_04815 PF01012 Electron transfer flavoprotein domain WU11_04820 PF01012 Electron transfer flavoprotein domain WU11_04820 PF00766 Electron transfer flavoprotein FAD-binding domain WU11_04825 PF12806 Acetyl-CoA dehydrogenase C-terminal like WU11_04825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_04825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_04825 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_04830 PF00578 AhpC/TSA family WU11_04830 PF10417 C-terminal domain of 1-Cys peroxiredoxin WU11_04845 PF00528 Binding-protein-dependent transport system inner membrane component WU11_04850 PF00528 Binding-protein-dependent transport system inner membrane component WU11_04855 PF00005 ABC transporter WU11_04855 PF17850 CysA C-terminal regulatory domain WU11_04855 PF12857 TOBE-like domain WU11_04865 PF01507 Phosphoadenosine phosphosulfate reductase family WU11_04875 PF04055 Radical SAM superfamily WU11_04890 PF01245 Ribosomal protein L19 WU11_04895 PF00293 NUDIX domain WU11_04905 PF00248 Aldo/keto reductase family WU11_04920 PF04345 Chorismate lyase WU11_04925 PF01479 S4 domain WU11_04925 PF00849 RNA pseudouridylate synthase WU11_04930 PF03466 LysR substrate binding domain WU11_04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_04940 PF00873 AcrB/AcrD/AcrF family WU11_04945 PF02321 Outer membrane efflux protein WU11_04955 PF02630 SCO1/SenC WU11_04960 PF01432 Peptidase family M3 WU11_04965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WU11_04965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WU11_04970 PF00196 Bacterial regulatory proteins, luxR family WU11_04970 PF00072 Response regulator receiver domain WU11_04975 PF00989 PAS fold WU11_04975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_04975 PF00512 His Kinase A (phospho-acceptor) domain WU11_04980 PF00456 Transketolase, thiamine diphosphate binding domain WU11_04980 PF17831 Pyruvate dehydrogenase E1 component middle domain WU11_04985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WU11_04985 PF02817 e3 binding domain WU11_04985 PF00364 Biotin-requiring enzyme WU11_04990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU11_04990 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_04995 PF00669 Bacterial flagellin N-terminal helical region WU11_04995 PF00700 Bacterial flagellin C-terminal helical region WU11_05005 PF04452 RNA methyltransferase WU11_05010 PF02779 Transketolase, pyrimidine binding domain WU11_05010 PF02780 Transketolase, C-terminal domain WU11_05010 PF00456 Transketolase, thiamine diphosphate binding domain WU11_05015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WU11_05015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WU11_05020 PF00162 Phosphoglycerate kinase WU11_05030 PF00871 Acetokinase family WU11_05035 PF01515 Phosphate acetyl/butaryl transferase WU11_05040 PF11339 Protein of unknown function (DUF3141) WU11_05045 PF14834 Glutathione S-transferase, C-terminal domain WU11_05045 PF02798 Glutathione S-transferase, N-terminal domain WU11_05065 PF01556 DnaJ C terminal domain WU11_05065 PF00226 DnaJ domain WU11_05075 PF03591 AzlC protein WU11_05085 PF00994 Probable molybdopterin binding domain WU11_05095 PF08525 Opacity-associated protein A N-terminal motif WU11_05095 PF01551 Peptidase family M23 WU11_05095 PF01476 LysM domain WU11_05105 PF01176 Translation initiation factor 1A / IF-1 WU11_05115 PF04539 Sigma-70 region 3 WU11_05115 PF04545 Sigma-70, region 4 WU11_05115 PF04542 Sigma-70 region 2 WU11_05120 PF05247 Flagellar transcriptional activator (FlhD) WU11_05125 PF05280 Flagellar transcriptional activator (FlhC) WU11_05130 PF01618 MotA/TolQ/ExbB proton channel family WU11_05135 PF13677 Membrane MotB of proton-channel complex MotA/MotB WU11_05135 PF00691 OmpA family WU11_05140 PF00072 Response regulator receiver domain WU11_05145 PF01627 Hpt domain WU11_05145 PF09078 CheY binding WU11_05145 PF01584 CheW-like domain WU11_05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_05145 PF02895 Signal transducing histidine kinase, homodimeric domain WU11_05150 PF01584 CheW-like domain WU11_05155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU11_05155 PF02203 Tar ligand binding domain homologue WU11_05155 PF00672 HAMP domain WU11_05165 PF00072 Response regulator receiver domain WU11_05165 PF01339 CheB methylesterase WU11_05170 PF00072 Response regulator receiver domain WU11_05175 PF04344 Chemotaxis phosphatase, CheZ WU11_05200 PF00248 Aldo/keto reductase family WU11_05205 PF00795 Carbon-nitrogen hydrolase WU11_05210 PF00571 CBS domain WU11_05210 PF03471 Transporter associated domain WU11_05215 PF02130 Uncharacterized protein family UPF0054 WU11_05220 PF02562 PhoH-like protein WU11_05225 PF04055 Radical SAM superfamily WU11_05225 PF01938 TRAM domain WU11_05225 PF00919 Uncharacterized protein family UPF0004 WU11_05240 PF07549 SecD/SecF GG Motif WU11_05240 PF02355 Protein export membrane protein WU11_05245 PF13721 SecD export protein N-terminal TM region WU11_05245 PF02355 Protein export membrane protein WU11_05245 PF07549 SecD/SecF GG Motif WU11_05250 PF02699 Preprotein translocase subunit WU11_05255 PF01702 Queuine tRNA-ribosyltransferase WU11_05260 PF02547 Queuosine biosynthesis protein WU11_05265 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family WU11_05280 PF03797 Autotransporter beta-domain WU11_05280 PF03212 Pertactin WU11_05285 PF10414 Sirohaem synthase dimerisation region WU11_05285 PF14824 Sirohaem biosynthesis protein central WU11_05285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WU11_05310 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WU11_05315 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain WU11_05315 PF01464 Transglycosylase SLT domain WU11_05320 PF00155 Aminotransferase class I and II WU11_05330 PF01515 Phosphate acetyl/butaryl transferase WU11_05330 PF03949 Malic enzyme, NAD binding domain WU11_05330 PF00390 Malic enzyme, N-terminal domain WU11_05340 PF01337 Barstar (barnase inhibitor) WU11_05355 PF00005 ABC transporter WU11_05360 PF00528 Binding-protein-dependent transport system inner membrane component WU11_05365 PF00528 Binding-protein-dependent transport system inner membrane component WU11_05370 PF12849 PBP superfamily domain WU11_05375 PF02503 Polyphosphate kinase middle domain WU11_05375 PF17941 Polyphosphate kinase C-terminal domain 1 WU11_05375 PF13089 Polyphosphate kinase N-terminal domain WU11_05375 PF13090 Polyphosphate kinase C-terminal domain 2 WU11_05380 PF02541 Ppx/GppA phosphatase family WU11_05390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WU11_05390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WU11_05390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WU11_05390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WU11_05395 PF00809 Pterin binding enzyme WU11_05400 PF00004 ATPase family associated with various cellular activities (AAA) WU11_05400 PF17862 AAA+ lid domain WU11_05400 PF06480 FtsH Extracellular WU11_05400 PF01434 Peptidase family M41 WU11_05405 PF01728 FtsJ-like methyltransferase WU11_05410 PF01985 CRS1 / YhbY (CRM) domain WU11_05430 PF01636 Phosphotransferase enzyme family WU11_05435 PF01207 Dihydrouridine synthase (Dus) WU11_05450 PF03631 Virulence factor BrkB WU11_05460 PF02696 Uncharacterized ACR, YdiU/UPF0061 family WU11_05465 PF00486 Transcriptional regulatory protein, C terminal WU11_05465 PF00072 Response regulator receiver domain WU11_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_05470 PF07689 KaiB domain WU11_05470 PF00512 His Kinase A (phospho-acceptor) domain WU11_05480 PF00005 ABC transporter WU11_05480 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_05500 PF00005 ABC transporter WU11_05505 PF00501 AMP-binding enzyme WU11_05510 PF00440 Bacterial regulatory proteins, tetR family WU11_05510 PF17932 Tetracyclin repressor-like, C-terminal domain WU11_05520 PF01336 OB-fold nucleic acid binding domain WU11_05520 PF00152 tRNA synthetases class II (D, K and N) WU11_05525 PF00106 short chain dehydrogenase WU11_05530 PF03462 PCRF domain WU11_05530 PF00472 RF-1 domain WU11_05535 PF01368 DHH family WU11_05535 PF02272 DHHA1 domain WU11_05535 PF17768 RecJ OB domain WU11_05545 PF12704 MacB-like periplasmic core domain WU11_05545 PF02687 FtsX-like permease family WU11_05550 PF00005 ABC transporter WU11_05555 PF01026 TatD related DNase WU11_05590 PF02811 PHP domain WU11_05595 PF03449 Transcription elongation factor, N-terminal WU11_05595 PF01272 Transcription elongation factor, GreA/GreB, C-term WU11_05605 PF16970 Type-1 fimbrial protein, A WU11_05610 PF01515 Phosphate acetyl/butaryl transferase WU11_05610 PF03949 Malic enzyme, NAD binding domain WU11_05610 PF00390 Malic enzyme, N-terminal domain WU11_05615 PF17831 Pyruvate dehydrogenase E1 component middle domain WU11_05615 PF00456 Transketolase, thiamine diphosphate binding domain WU11_05620 PF01037 Lrp/AsnC ligand binding domain WU11_05625 PF03169 OPT oligopeptide transporter protein WU11_05630 PF03169 OPT oligopeptide transporter protein WU11_05635 PF16078 2-oxoglutarate dehydrogenase N-terminus WU11_05635 PF16870 2-oxoglutarate dehydrogenase C-terminal WU11_05635 PF02779 Transketolase, pyrimidine binding domain WU11_05635 PF00676 Dehydrogenase E1 component WU11_05640 PF02817 e3 binding domain WU11_05640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WU11_05640 PF00364 Biotin-requiring enzyme WU11_05645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU11_05645 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_05650 PF03969 AFG1-like ATPase WU11_05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_05660 PF03466 LysR substrate binding domain WU11_05670 PF03401 Tripartite tricarboxylate transporter family receptor WU11_05690 PF00579 tRNA synthetases class I (W and Y) WU11_05695 PF09371 Tex-like protein N-terminal domain WU11_05695 PF16921 Tex protein YqgF-like domain WU11_05695 PF00575 S1 RNA binding domain WU11_05695 PF17674 HHH domain WU11_05700 PF13307 Helicase C-terminal domain WU11_05700 PF04851 Type III restriction enzyme, res subunit WU11_05705 PF13525 Outer membrane lipoprotein WU11_05710 PF00849 RNA pseudouridylate synthase WU11_05710 PF01479 S4 domain WU11_05720 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus WU11_05725 PF00106 short chain dehydrogenase WU11_05730 PF07879 PHB/PHA accumulation regulator DNA-binding domain WU11_05730 PF05233 PHB accumulation regulatory domain WU11_05735 PF10634 Fe2+ transport protein WU11_05745 PF03239 Iron permease FTR1 family WU11_05755 PF02567 Phenazine biosynthesis-like protein WU11_05775 PF03401 Tripartite tricarboxylate transporter family receptor WU11_05780 PF13378 Enolase C-terminal domain-like WU11_05780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain WU11_05785 PF03466 LysR substrate binding domain WU11_05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_05795 PF07690 Major Facilitator Superfamily WU11_05810 PF02016 LD-carboxypeptidase N-terminal domain WU11_05810 PF17676 LD-carboxypeptidase C-terminal domain WU11_05820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_05820 PF03466 LysR substrate binding domain WU11_05825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU11_05825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU11_05830 PF03401 Tripartite tricarboxylate transporter family receptor WU11_05855 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WU11_05880 PF00005 ABC transporter WU11_05885 PF00528 Binding-protein-dependent transport system inner membrane component WU11_05890 PF00528 Binding-protein-dependent transport system inner membrane component WU11_05895 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_05930 PF02627 Carboxymuconolactone decarboxylase family WU11_05935 PF08281 Sigma-70, region 4 WU11_05935 PF12680 SnoaL-like domain WU11_05935 PF04542 Sigma-70 region 2 WU11_05945 PF12843 Putative quorum-sensing-regulated virulence factor WU11_05950 PF00293 NUDIX domain WU11_05965 PF13545 Crp-like helix-turn-helix domain WU11_05965 PF00027 Cyclic nucleotide-binding domain WU11_05970 PF00004 ATPase family associated with various cellular activities (AAA) WU11_05970 PF17871 AAA lid domain WU11_05970 PF07724 AAA domain (Cdc48 subfamily) WU11_05970 PF02861 Clp amino terminal domain, pathogenicity island component WU11_05970 PF10431 C-terminal, D2-small domain, of ClpB protein WU11_05985 PF03797 Autotransporter beta-domain WU11_05985 PF03212 Pertactin WU11_06000 PF09370 Phosphoenolpyruvate hydrolase-like WU11_06010 PF03466 LysR substrate binding domain WU11_06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_06015 PF07969 Amidohydrolase family WU11_06025 PF00175 Oxidoreductase NAD-binding domain WU11_06025 PF00667 FAD binding domain WU11_06025 PF00258 Flavodoxin WU11_06030 PF02424 ApbE family WU11_06050 PF00005 ABC transporter WU11_06055 PF01061 ABC-2 type transporter WU11_06065 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WU11_06070 PF01593 Flavin containing amine oxidoreductase WU11_06070 PF01593 Flavin containing amine oxidoreductase WU11_06085 PF00842 Alanine racemase, C-terminal domain WU11_06085 PF01168 Alanine racemase, N-terminal domain WU11_06105 PF04545 Sigma-70, region 4 WU11_06105 PF04542 Sigma-70 region 2 WU11_06110 PF12450 von Willebrand factor WU11_06110 PF00092 von Willebrand factor type A domain WU11_06110 PF12034 Domain of unknown function (DUF3520) WU11_06115 PF18073 Rubredoxin metal binding domain WU11_06130 PF01554 MatE WU11_06140 PF01197 Ribosomal protein L31 WU11_06145 PF03301 Tryptophan 2,3-dioxygenase WU11_06150 PF04199 Putative cyclase WU11_06155 PF04002 RadC-like JAB domain WU11_06160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WU11_06165 PF02401 LytB protein WU11_06170 PF14497 Glutathione S-transferase, C-terminal domain WU11_06170 PF02798 Glutathione S-transferase, N-terminal domain WU11_06190 PF07683 Cobalamin synthesis protein cobW C-terminal domain WU11_06190 PF02492 CobW/HypB/UreG, nucleotide-binding domain WU11_06195 PF00881 Nitroreductase family WU11_06200 PF03466 LysR substrate binding domain WU11_06200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_06210 PF04079 Segregation and condensation complex subunit ScpB WU11_06215 PF01479 S4 domain WU11_06215 PF00849 RNA pseudouridylate synthase WU11_06220 PF02576 RimP N-terminal domain WU11_06220 PF17384 RimP C-terminal SH3 domain WU11_06225 PF08529 NusA N-terminal domain WU11_06225 PF13184 NusA-like KH domain WU11_06230 PF11987 Translation-initiation factor 2 WU11_06230 PF08364 Bacterial translation initiation factor IF-2 associated region WU11_06230 PF04760 Translation initiation factor IF-2, N-terminal region WU11_06230 PF00009 Elongation factor Tu GTP binding domain WU11_06235 PF02033 Ribosome-binding factor A WU11_06240 PF01509 TruB family pseudouridylate synthase (N terminal domain) WU11_06240 PF16198 tRNA pseudouridylate synthase B C-terminal domain WU11_06260 PF03641 Possible lysine decarboxylase WU11_06265 PF00476 DNA polymerase family A WU11_06265 PF01367 5'-3' exonuclease, C-terminal SAM fold WU11_06265 PF01612 3'-5' exonuclease WU11_06265 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WU11_06275 PF01738 Dienelactone hydrolase family WU11_06280 PF02690 Na+/Pi-cotransporter WU11_06285 PF03315 Serine dehydratase beta chain WU11_06285 PF03313 Serine dehydratase alpha chain WU11_06290 PF02677 Epoxyqueuosine reductase QueH WU11_06295 PF08335 GlnD PII-uridylyltransferase WU11_06295 PF03710 Glutamate-ammonia ligase adenylyltransferase WU11_06305 PF07497 Rho termination factor, RNA-binding domain WU11_06305 PF07498 Rho termination factor, N-terminal domain WU11_06305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU11_06310 PF00085 Thioredoxin WU11_06315 PF00986 DNA gyrase B subunit, carboxyl terminus WU11_06315 PF00204 DNA gyrase B WU11_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_06315 PF01751 Toprim domain WU11_06325 PF00521 DNA gyrase/topoisomerase IV, subunit A WU11_06330 PF04235 Protein of unknown function (DUF418) WU11_06355 PF01177 Asp/Glu/Hydantoin racemase WU11_06360 PF00005 ABC transporter WU11_06365 PF00005 ABC transporter WU11_06365 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_06370 PF11862 Domain of unknown function (DUF3382) WU11_06370 PF02653 Branched-chain amino acid transport system / permease component WU11_06375 PF02653 Branched-chain amino acid transport system / permease component WU11_06380 PF13458 Periplasmic binding protein WU11_06390 PF02592 Putative vitamin uptake transporter WU11_06395 PF14748 Pyrroline-5-carboxylate reductase dimerisation WU11_06395 PF03807 NADP oxidoreductase coenzyme F420-dependent WU11_06400 PF13416 Bacterial extracellular solute-binding protein WU11_06405 PF00528 Binding-protein-dependent transport system inner membrane component WU11_06410 PF00528 Binding-protein-dependent transport system inner membrane component WU11_06415 PF17912 MalK OB fold domain WU11_06415 PF00005 ABC transporter WU11_06420 PF13458 Periplasmic binding protein WU11_06440 PF04241 Protein of unknown function (DUF423) WU11_06455 PF03180 NLPA lipoprotein WU11_06460 PF01070 FMN-dependent dehydrogenase WU11_06465 PF02666 Phosphatidylserine decarboxylase WU11_06480 PF03099 Biotin/lipoate A/B protein ligase family WU11_06480 PF10437 Bacterial lipoate protein ligase C-terminus WU11_06495 PF02798 Glutathione S-transferase, N-terminal domain WU11_06495 PF00043 Glutathione S-transferase, C-terminal domain WU11_06500 PF00255 Glutathione peroxidase WU11_06520 PF02515 CoA-transferase family III WU11_06525 PF03960 ArsC family WU11_06530 PF00578 AhpC/TSA family WU11_06555 PF07681 DoxX WU11_06570 PF00248 Aldo/keto reductase family WU11_06575 PF00582 Universal stress protein family WU11_06590 PF00392 Bacterial regulatory proteins, gntR family WU11_06590 PF00155 Aminotransferase class I and II WU11_06595 PF01168 Alanine racemase, N-terminal domain WU11_06600 PF08543 Phosphomethylpyrimidine kinase WU11_06610 PF00128 Alpha amylase, catalytic domain WU11_06625 PF00128 Alpha amylase, catalytic domain WU11_06625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WU11_06625 PF11941 Domain of unknown function (DUF3459) WU11_06630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WU11_06630 PF00128 Alpha amylase, catalytic domain WU11_06635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WU11_06635 PF02806 Alpha amylase, C-terminal all-beta domain WU11_06635 PF00128 Alpha amylase, catalytic domain WU11_06640 PF16657 Maltogenic Amylase, C-terminal domain WU11_06640 PF00128 Alpha amylase, catalytic domain WU11_06645 PF11896 Domain of unknown function (DUF3416) WU11_06645 PF00128 Alpha amylase, catalytic domain WU11_06690 PF13091 PLD-like domain WU11_06695 PF03372 Endonuclease/Exonuclease/phosphatase family WU11_06700 PF03551 Transcriptional regulator PadR-like family WU11_06710 PF12951 Passenger-associated-transport-repeat WU11_06720 PF03466 LysR substrate binding domain WU11_06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_06730 PF03328 HpcH/HpaI aldolase/citrate lyase family WU11_06735 PF00392 Bacterial regulatory proteins, gntR family WU11_06735 PF07729 FCD domain WU11_06745 PF03401 Tripartite tricarboxylate transporter family receptor WU11_06755 PF02515 CoA-transferase family III WU11_06760 PF03401 Tripartite tricarboxylate transporter family receptor WU11_06765 PF00356 Bacterial regulatory proteins, lacI family WU11_06770 PF00694 Aconitase C-terminal domain WU11_06780 PF03401 Tripartite tricarboxylate transporter family receptor WU11_06785 PF13378 Enolase C-terminal domain-like WU11_06790 PF02558 Ketopantoate reductase PanE/ApbA WU11_06790 PF08546 Ketopantoate reductase PanE/ApbA C terminal WU11_06800 PF00005 ABC transporter WU11_06810 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_06820 PF01312 FlhB HrpN YscU SpaS Family WU11_06840 PF04316 Anti-sigma-28 factor, FlgM WU11_06850 PF00460 Flagella basal body rod protein WU11_06855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU11_06855 PF00460 Flagella basal body rod protein WU11_06860 PF13860 FlgD Ig-like domain WU11_06860 PF03963 Flagellar hook capping protein - N-terminal region WU11_06860 PF13861 FlgD Tudor-like domain WU11_06865 PF00460 Flagella basal body rod protein WU11_06865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU11_06865 PF07559 Flagellar basal body protein FlaE WU11_06870 PF00460 Flagella basal body rod protein WU11_06870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU11_06875 PF00460 Flagella basal body rod protein WU11_06875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU11_06880 PF02107 Flagellar L-ring protein WU11_06885 PF02119 Flagellar P-ring protein WU11_06890 PF10135 Rod binding protein WU11_06890 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase WU11_06895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU11_06895 PF00460 Flagella basal body rod protein WU11_06900 PF00669 Bacterial flagellin N-terminal helical region WU11_06905 PF00672 HAMP domain WU11_06905 PF02203 Tar ligand binding domain homologue WU11_06905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU11_06910 PF00672 HAMP domain WU11_06910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU11_06910 PF02203 Tar ligand binding domain homologue WU11_06915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU11_06915 PF08447 PAS fold WU11_06925 PF01311 Bacterial export proteins, family 1 WU11_06930 PF01313 Bacterial export proteins, family 3 WU11_06935 PF00813 FliP family WU11_06940 PF04347 Flagellar biosynthesis protein, FliO WU11_06945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WU11_06945 PF16973 Flagellar motor switch protein FliN N-terminal WU11_06950 PF02154 Flagellar motor switch protein FliM WU11_06950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WU11_06955 PF03748 Flagellar basal body-associated protein FliL WU11_06980 PF18269 T3SS EscN ATPase C-terminal domain WU11_06980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU11_06990 PF01706 FliG C-terminal domain WU11_06990 PF14841 FliG middle domain WU11_06990 PF14842 FliG N-terminal domain WU11_06995 PF01514 Secretory protein of YscJ/FliF family WU11_06995 PF08345 Flagellar M-ring protein C-terminal WU11_07000 PF02049 Flagellar hook-basal body complex protein FliE WU11_07010 PF01312 FlhB HrpN YscU SpaS Family WU11_07030 PF02561 Flagellar protein FliS WU11_07035 PF07195 Flagellar hook-associated protein 2 C-terminus WU11_07035 PF02465 Flagellar hook-associated protein 2 N-terminus WU11_07035 PF07196 Flagellin hook IN motif WU11_07045 PF08245 Mur ligase middle domain WU11_07045 PF02875 Mur ligase family, glutamate ligase domain WU11_07060 PF00156 Phosphoribosyl transferase domain WU11_07075 PF08335 GlnD PII-uridylyltransferase WU11_07075 PF01966 HD domain WU11_07075 PF01909 Nucleotidyltransferase domain WU11_07080 PF00557 Metallopeptidase family M24 WU11_07085 PF00318 Ribosomal protein S2 WU11_07090 PF00889 Elongation factor TS WU11_07095 PF00696 Amino acid kinase family WU11_07100 PF01765 Ribosome recycling factor WU11_07105 PF01255 Putative undecaprenyl diphosphate synthase WU11_07115 PF13288 DXP reductoisomerase C-terminal domain WU11_07115 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WU11_07115 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain WU11_07120 PF02163 Peptidase family M50 WU11_07120 PF17820 PDZ domain WU11_07125 PF07244 Surface antigen variable number repeat WU11_07125 PF01103 Surface antigen WU11_07130 PF03938 Outer membrane protein (OmpH-like) WU11_07135 PF00132 Bacterial transferase hexapeptide (six repeats) WU11_07135 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD WU11_07140 PF07977 FabA-like domain WU11_07145 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 WU11_07145 PF00132 Bacterial transferase hexapeptide (six repeats) WU11_07150 PF02684 Lipid-A-disaccharide synthetase WU11_07155 PF01351 Ribonuclease HII WU11_07160 PF08032 RNA 2'-O ribose methyltransferase substrate binding WU11_07160 PF00588 SpoU rRNA Methylase family WU11_07165 PF03618 Kinase/pyrophosphorylase WU11_07170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WU11_07170 PF00391 PEP-utilising enzyme, mobile domain WU11_07170 PF02896 PEP-utilising enzyme, TIM barrel domain WU11_07175 PF00958 GMP synthase C terminal domain WU11_07175 PF00117 Glutamine amidotransferase class-I WU11_07190 PF16200 C-terminal region of band_7 WU11_07190 PF01145 SPFH domain / Band 7 family WU11_07195 PF08448 PAS fold WU11_07195 PF00990 Diguanylate cyclase, GGDEF domain WU11_07200 PF01668 SmpB protein WU11_07210 PF03364 Polyketide cyclase / dehydrase and lipid transport WU11_07215 PF03658 RnfH family Ubiquitin WU11_07220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_07220 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_07220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_07225 PF00378 Enoyl-CoA hydratase/isomerase WU11_07230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU11_07230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU11_07255 PF00923 Transaldolase/Fructose-6-phosphate aldolase WU11_07260 PF00117 Glutamine amidotransferase class-I WU11_07260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WU11_07265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WU11_07265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU11_07265 PF02142 MGS-like domain WU11_07275 PF00300 Histidine phosphatase superfamily (branch 1) WU11_07285 PF08402 TOBE domain WU11_07285 PF00005 ABC transporter WU11_07290 PF00528 Binding-protein-dependent transport system inner membrane component WU11_07305 PF08448 PAS fold WU11_07305 PF00563 EAL domain WU11_07305 PF00990 Diguanylate cyclase, GGDEF domain WU11_07305 PF08447 PAS fold WU11_07310 PF01264 Chorismate synthase WU11_07315 PF01435 Peptidase family M48 WU11_07320 PF03205 Molybdopterin guanine dinucleotide synthesis protein B WU11_07325 PF00994 Probable molybdopterin binding domain WU11_07325 PF03454 MoeA C-terminal region (domain IV) WU11_07325 PF03453 MoeA N-terminal region (domain I and II) WU11_07330 PF12804 MobA-like NTP transferase domain WU11_07335 PF10609 NUBPL iron-transfer P-loop NTPase WU11_07365 PF01568 Molydopterin dinucleotide binding domain WU11_07365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WU11_07365 PF00384 Molybdopterin oxidoreductase WU11_07400 PF00005 ABC transporter WU11_07405 PF12849 PBP superfamily domain WU11_07410 PF00330 Aconitase family (aconitate hydratase) WU11_07415 PF00694 Aconitase C-terminal domain WU11_07420 PF00180 Isocitrate/isopropylmalate dehydrogenase WU11_07425 PF02774 Semialdehyde dehydrogenase, dimerisation domain WU11_07425 PF01118 Semialdehyde dehydrogenase, NAD binding domain WU11_07435 PF01416 tRNA pseudouridine synthase WU11_07440 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_07450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU11_07455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase WU11_07470 PF03883 Peroxide stress protein YaaA WU11_07490 PF00990 Diguanylate cyclase, GGDEF domain WU11_07490 PF17158 Membrane-associated sensor, integral membrane domain WU11_07500 PF06969 HemN C-terminal domain WU11_07500 PF04055 Radical SAM superfamily WU11_07510 PF00196 Bacterial regulatory proteins, luxR family WU11_07515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WU11_07515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WU11_07515 PF03129 Anticodon binding domain WU11_07515 PF02824 TGS domain WU11_07520 PF05198 Translation initiation factor IF-3, N-terminal domain WU11_07520 PF00707 Translation initiation factor IF-3, C-terminal domain WU11_07525 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WU11_07525 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WU11_07535 PF00381 PTS HPr component phosphorylation site WU11_07540 PF02896 PEP-utilising enzyme, TIM barrel domain WU11_07540 PF00391 PEP-utilising enzyme, mobile domain WU11_07540 PF05524 PEP-utilising enzyme, N-terminal WU11_07550 PF02423 Ornithine cyclodeaminase/mu-crystallin family WU11_07560 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_07565 PF00528 Binding-protein-dependent transport system inner membrane component WU11_07570 PF00528 Binding-protein-dependent transport system inner membrane component WU11_07575 PF00005 ABC transporter WU11_07590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU11_07590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU11_07600 PF02293 AmiS/UreI family transporter WU11_07605 PF03069 Acetamidase/Formamidase family WU11_07620 PF01116 Fructose-bisphosphate aldolase class-II WU11_07630 PF01259 SAICAR synthetase WU11_07635 PF15723 Motility quorum-sensing regulator, toxin of MqsA WU11_07640 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA WU11_07645 PF02600 Disulfide bond formation protein DsbB WU11_07650 PF00731 AIR carboxylase WU11_07655 PF02222 ATP-grasp domain WU11_07655 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WU11_07660 PF03481 Putative GTP-binding controlling metal-binding WU11_07660 PF01300 Telomere recombination WU11_07665 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_07670 PF09339 IclR helix-turn-helix domain WU11_07670 PF01614 Bacterial transcriptional regulator WU11_07675 PF00491 Arginase family WU11_07680 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_07685 PF00528 Binding-protein-dependent transport system inner membrane component WU11_07690 PF00005 ABC transporter WU11_07695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_07695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_07705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_07705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_07705 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_07710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_07710 PF00205 Thiamine pyrophosphate enzyme, central domain WU11_07710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_07715 PF03466 LysR substrate binding domain WU11_07715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_07720 PF02899 Phage integrase, N-terminal SAM-like domain WU11_07720 PF00589 Phage integrase family WU11_07725 PF04073 Aminoacyl-tRNA editing domain WU11_07730 PF01174 SNO glutamine amidotransferase family WU11_07745 PF00768 D-alanyl-D-alanine carboxypeptidase WU11_07765 PF13361 UvrD-like helicase C-terminal domain WU11_07765 PF00580 UvrD/REP helicase N-terminal domain WU11_07765 PF12705 PD-(D/E)XK nuclease superfamily WU11_07770 PF12170 DNA polymerase III tau subunit V interacting with alpha WU11_07770 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding WU11_07770 PF12169 DNA polymerase III subunits gamma and tau domain III WU11_07775 PF02575 YbaB/EbfC DNA-binding family WU11_07780 PF13662 Toprim domain WU11_07780 PF02132 RecR protein WU11_07800 PF04228 Putative neutral zinc metallopeptidase WU11_07805 PF01300 Telomere recombination WU11_07840 PF03358 NADPH-dependent FMN reductase WU11_07845 PF07311 Dodecin WU11_07850 PF05188 MutS domain II WU11_07850 PF05192 MutS domain III WU11_07850 PF01624 MutS domain I WU11_07850 PF05190 MutS family domain IV WU11_07850 PF00488 MutS domain V WU11_07855 PF08007 Cupin superfamily protein WU11_07860 PF16970 Type-1 fimbrial protein, A WU11_07865 PF06804 NlpB/DapX lipoprotein WU11_07870 PF00701 Dihydrodipicolinate synthetase family WU11_07885 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_07890 PF00528 Binding-protein-dependent transport system inner membrane component WU11_07895 PF00005 ABC transporter WU11_07900 PF02824 TGS domain WU11_07900 PF13291 ACT domain WU11_07900 PF04607 Region found in RelA / SpoT proteins WU11_07905 PF01192 RNA polymerase Rpb6 WU11_07910 PF00625 Guanylate kinase WU11_07915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU11_07920 PF00034 Cytochrome c WU11_07930 PF00877 NlpC/P60 family WU11_07935 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus WU11_07935 PF01048 Phosphorylase superfamily WU11_07955 PF08340 Domain of unknown function (DUF1732) WU11_07955 PF03755 YicC-like family, N-terminal region WU11_07960 PF01138 3' exoribonuclease family, domain 1 WU11_07960 PF03725 3' exoribonuclease family, domain 2 WU11_07970 PF03466 LysR substrate binding domain WU11_07970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_07975 PF00672 HAMP domain WU11_07975 PF00990 Diguanylate cyclase, GGDEF domain WU11_07975 PF17154 Gammaproteobacterial periplasmic sensor domain WU11_07975 PF00563 EAL domain WU11_07980 PF01725 Ham1 family WU11_07990 PF04055 Radical SAM superfamily WU11_07990 PF06969 HemN C-terminal domain WU11_08000 PF00512 His Kinase A (phospho-acceptor) domain WU11_08000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_08000 PF00989 PAS fold WU11_08005 PF02954 Bacterial regulatory protein, Fis family WU11_08005 PF00158 Sigma-54 interaction domain WU11_08005 PF00072 Response regulator receiver domain WU11_08010 PF03466 LysR substrate binding domain WU11_08010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_08015 PF02678 Pirin WU11_08015 PF17954 Quercetinase C-terminal cupin domain WU11_08020 PF05726 Pirin C-terminal cupin domain WU11_08020 PF02678 Pirin WU11_08030 PF08402 TOBE domain WU11_08030 PF00005 ABC transporter WU11_08035 PF00528 Binding-protein-dependent transport system inner membrane component WU11_08045 PF00175 Oxidoreductase NAD-binding domain WU11_08045 PF00970 Oxidoreductase FAD-binding domain WU11_08050 PF03466 LysR substrate binding domain WU11_08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_08060 PF00248 Aldo/keto reductase family WU11_08070 PF01042 Endoribonuclease L-PSP WU11_08075 PF00270 DEAD/DEAH box helicase WU11_08075 PF00271 Helicase conserved C-terminal domain WU11_08075 PF17191 RecG wedge domain WU11_08080 PF03466 LysR substrate binding domain WU11_08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_08085 PF03466 LysR substrate binding domain WU11_08090 PF00171 Aldehyde dehydrogenase family WU11_08095 PF00210 Ferritin-like domain WU11_08120 PF00005 ABC transporter WU11_08130 PF00534 Glycosyl transferases group 1 WU11_08140 PF02563 Polysaccharide biosynthesis/export protein WU11_08145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WU11_08145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WU11_08145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WU11_08150 PF01370 NAD dependent epimerase/dehydratase family WU11_08155 PF05159 Capsule polysaccharide biosynthesis protein WU11_08160 PF05159 Capsule polysaccharide biosynthesis protein WU11_08170 PF00106 short chain dehydrogenase WU11_08195 PF00005 ABC transporter WU11_08200 PF00005 ABC transporter WU11_08200 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_08215 PF03741 Integral membrane protein TerC family WU11_08225 PF03401 Tripartite tricarboxylate transporter family receptor WU11_08240 PF17863 AAA lid domain WU11_08240 PF07726 ATPase family associated with various cellular activities (AAA) WU11_08270 PF00884 Sulfatase WU11_08295 PF00072 Response regulator receiver domain WU11_08295 PF00196 Bacterial regulatory proteins, luxR family WU11_08300 PF12951 Passenger-associated-transport-repeat WU11_08300 PF00082 Subtilase family WU11_08300 PF03797 Autotransporter beta-domain WU11_08305 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA WU11_08315 PF00043 Glutathione S-transferase, C-terminal domain WU11_08315 PF02798 Glutathione S-transferase, N-terminal domain WU11_08330 PF03401 Tripartite tricarboxylate transporter family receptor WU11_08340 PF01070 FMN-dependent dehydrogenase WU11_08345 PF01557 Fumarylacetoacetate (FAA) hydrolase family WU11_08360 PF03401 Tripartite tricarboxylate transporter family receptor WU11_08365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_08365 PF03466 LysR substrate binding domain WU11_08370 PF03401 Tripartite tricarboxylate transporter family receptor WU11_08400 PF03358 NADPH-dependent FMN reductase WU11_08425 PF03401 Tripartite tricarboxylate transporter family receptor WU11_08435 PF03466 LysR substrate binding domain WU11_08435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_08455 PF13244 Domain of unknown function (DUF4040) WU11_08455 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter WU11_08455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WU11_08455 PF00361 Proton-conducting membrane transporter WU11_08460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WU11_08465 PF00361 Proton-conducting membrane transporter WU11_08470 PF01899 Na+/H+ ion antiporter subunit WU11_08475 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) WU11_08500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WU11_08505 PF17676 LD-carboxypeptidase C-terminal domain WU11_08505 PF02016 LD-carboxypeptidase N-terminal domain WU11_08510 PF00378 Enoyl-CoA hydratase/isomerase WU11_08515 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU11_08525 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_08530 PF00005 ABC transporter WU11_08530 PF12848 ABC transporter WU11_08535 PF00005 ABC transporter WU11_08565 PF00042 Globin WU11_08565 PF00175 Oxidoreductase NAD-binding domain WU11_08565 PF00970 Oxidoreductase FAD-binding domain WU11_08570 PF02082 Transcriptional regulator WU11_08575 PF01266 FAD dependent oxidoreductase WU11_08590 PF01571 Aminomethyltransferase folate-binding domain WU11_08595 PF02618 YceG-like family WU11_08600 PF02223 Thymidylate kinase WU11_08605 PF12169 DNA polymerase III subunits gamma and tau domain III WU11_08610 PF01026 TatD related DNase WU11_08625 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_08635 PF00005 ABC transporter WU11_08645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WU11_08645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WU11_08655 PF07687 Peptidase dimerisation domain WU11_08655 PF01546 Peptidase family M20/M25/M40 WU11_08660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_08660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_08660 PF00205 Thiamine pyrophosphate enzyme, central domain WU11_08670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU11_08680 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_08680 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU11_08685 PF07729 FCD domain WU11_08685 PF00392 Bacterial regulatory proteins, gntR family WU11_08715 PF01425 Amidase WU11_08720 PF07286 Protein of unknown function (DUF1445) WU11_08730 PF00512 His Kinase A (phospho-acceptor) domain WU11_08730 PF01627 Hpt domain WU11_08730 PF00989 PAS fold WU11_08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_08730 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_08730 PF00072 Response regulator receiver domain WU11_08735 PF00072 Response regulator receiver domain WU11_08735 PF00196 Bacterial regulatory proteins, luxR family WU11_08740 PF13018 Extended Signal Peptide of Type V secretion system WU11_08740 PF05860 haemagglutination activity domain WU11_08740 PF05594 Haemagluttinin repeat WU11_08740 PF13332 Hemagglutinin repeat WU11_08745 PF16970 Type-1 fimbrial protein, A WU11_08750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain WU11_08750 PF02753 Pili assembly chaperone PapD, C-terminal domain WU11_08755 PF13953 PapC C-terminal domain WU11_08755 PF13954 PapC N-terminal domain WU11_08755 PF00577 Outer membrane usher protein WU11_08760 PF00419 Fimbrial protein WU11_08765 PF08479 POTRA domain, ShlB-type WU11_08765 PF17287 POTRA domain WU11_08765 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB WU11_08780 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_08815 PF05378 Hydantoinase/oxoprolinase N-terminal region WU11_08815 PF01968 Hydantoinase/oxoprolinase WU11_08830 PF00924 Mechanosensitive ion channel WU11_08830 PF05552 Conserved TM helix WU11_08840 PF03401 Tripartite tricarboxylate transporter family receptor WU11_08845 PF00588 SpoU rRNA Methylase family WU11_08850 PF00459 Inositol monophosphatase family WU11_08855 PF03741 Integral membrane protein TerC family WU11_08855 PF03471 Transporter associated domain WU11_08860 PF02673 Bacitracin resistance protein BacA WU11_08865 PF00149 Calcineurin-like phosphoesterase WU11_08870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WU11_08880 PF01406 tRNA synthetases class I (C) catalytic domain WU11_08880 PF09190 DALR domain WU11_08885 PF12833 Helix-turn-helix domain WU11_08885 PF00730 HhH-GPD superfamily base excision DNA repair protein WU11_08885 PF06029 AlkA N-terminal domain WU11_08885 PF02805 Metal binding domain of Ada WU11_08890 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit WU11_08900 PF09179 TilS substrate binding domain WU11_08900 PF01171 PP-loop family WU11_08905 PF01842 ACT domain WU11_08905 PF00696 Amino acid kinase family WU11_08905 PF13840 ACT domain WU11_08930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU11_08930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU11_08935 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU11_08940 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU11_08945 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_08950 PF00561 alpha/beta hydrolase fold WU11_08955 PF01958 Domain of unknown function DUF108 WU11_08955 PF03447 Homoserine dehydrogenase, NAD binding domain WU11_08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_08970 PF03466 LysR substrate binding domain WU11_08990 PF00528 Binding-protein-dependent transport system inner membrane component WU11_08995 PF00528 Binding-protein-dependent transport system inner membrane component WU11_09000 PF08402 TOBE domain WU11_09000 PF00005 ABC transporter WU11_09010 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_09010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WU11_09015 PF01614 Bacterial transcriptional regulator WU11_09015 PF09339 IclR helix-turn-helix domain WU11_09020 PF13380 CoA binding domain WU11_09025 PF03401 Tripartite tricarboxylate transporter family receptor WU11_09030 PF01042 Endoribonuclease L-PSP WU11_09055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WU11_09065 PF00535 Glycosyl transferase family 2 WU11_09070 PF01522 Polysaccharide deacetylase WU11_09070 PF14883 Hypothetical glycosyl hydrolase family 13 WU11_09090 PF12802 MarR family WU11_09105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WU11_09105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WU11_09105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WU11_09105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WU11_09110 PF00342 Phosphoglucose isomerase WU11_09115 PF00132 Bacterial transferase hexapeptide (six repeats) WU11_09125 PF02146 Sir2 family WU11_09130 PF00459 Inositol monophosphatase family WU11_09135 PF00171 Aldehyde dehydrogenase family WU11_09140 PF00202 Aminotransferase class-III WU11_09155 PF00580 UvrD/REP helicase N-terminal domain WU11_09155 PF13361 UvrD-like helicase C-terminal domain WU11_09160 PF01544 CorA-like Mg2+ transporter protein WU11_09170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_09175 PF00528 Binding-protein-dependent transport system inner membrane component WU11_09180 PF12911 N-terminal TM domain of oligopeptide transport permease C WU11_09180 PF00528 Binding-protein-dependent transport system inner membrane component WU11_09185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_09185 PF00005 ABC transporter WU11_09190 PF01047 MarR family WU11_09205 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB WU11_09205 PF08479 POTRA domain, ShlB-type WU11_09210 PF00563 EAL domain WU11_09210 PF00990 Diguanylate cyclase, GGDEF domain WU11_09210 PF03707 Bacterial signalling protein N terminal repeat WU11_09240 PF13629 Pilus formation protein N terminal region WU11_09240 PF00263 Bacterial type II and III secretion system protein WU11_09240 PF04972 BON domain WU11_09280 PF00158 Sigma-54 interaction domain WU11_09280 PF02954 Bacterial regulatory protein, Fis family WU11_09280 PF00072 Response regulator receiver domain WU11_09295 PF08281 Sigma-70, region 4 WU11_09295 PF04542 Sigma-70 region 2 WU11_09305 PF00034 Cytochrome c WU11_09310 PF01132 Elongation factor P (EF-P) OB domain WU11_09310 PF08207 Elongation factor P (EF-P) KOW-like domain WU11_09310 PF09285 Elongation factor P, C-terminal WU11_09325 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase WU11_09330 PF00330 Aconitase family (aconitate hydratase) WU11_09330 PF00694 Aconitase C-terminal domain WU11_09340 PF07715 TonB-dependent Receptor Plug Domain WU11_09340 PF00593 TonB dependent receptor WU11_09355 PF00691 OmpA family WU11_09365 PF00330 Aconitase family (aconitate hydratase) WU11_09365 PF11791 Aconitate B N-terminal domain WU11_09365 PF06434 Aconitate hydratase 2 N-terminus WU11_09390 PF00892 EamA-like transporter family WU11_09395 PF01925 Sulfite exporter TauE/SafE WU11_09410 PF03466 LysR substrate binding domain WU11_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_09415 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain WU11_09415 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain WU11_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_09425 PF03466 LysR substrate binding domain WU11_09470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU11_09470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU11_09475 PF01425 Amidase WU11_09485 PF00171 Aldehyde dehydrogenase family WU11_09500 PF09334 tRNA synthetases class I (M) WU11_09500 PF13603 Leucyl-tRNA synthetase, Domain 2 WU11_09500 PF00133 tRNA synthetases class I (I, L, M and V) WU11_09500 PF08264 Anticodon-binding domain of tRNA WU11_09505 PF07690 Major Facilitator Superfamily WU11_09510 PF01047 MarR family WU11_09530 PF00916 Sulfate permease family WU11_09530 PF01740 STAS domain WU11_09535 PF00471 Ribosomal protein L33 WU11_09540 PF00830 Ribosomal L28 family WU11_09545 PF07690 Major Facilitator Superfamily WU11_09565 PF00528 Binding-protein-dependent transport system inner membrane component WU11_09570 PF00571 CBS domain WU11_09570 PF00005 ABC transporter WU11_09575 PF01361 Tautomerase enzyme WU11_09580 PF00108 Thiolase, N-terminal domain WU11_09580 PF02803 Thiolase, C-terminal domain WU11_09590 PF07729 FCD domain WU11_09590 PF00392 Bacterial regulatory proteins, gntR family WU11_09600 PF00378 Enoyl-CoA hydratase/isomerase WU11_09610 PF03401 Tripartite tricarboxylate transporter family receptor WU11_09615 PF00080 Copper/zinc superoxide dismutase (SODC) WU11_09630 PF00005 ABC transporter WU11_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_09635 PF03459 TOBE domain WU11_09655 PF00529 HlyD membrane-fusion protein of T1SS WU11_09655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU11_09660 PF00873 AcrB/AcrD/AcrF family WU11_09670 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WU11_09675 PF01648 4'-phosphopantetheinyl transferase superfamily WU11_09680 PF00933 Glycosyl hydrolase family 3 N terminal domain WU11_09685 PF01541 GIY-YIG catalytic domain WU11_09685 PF02151 UvrB/uvrC motif WU11_09685 PF08459 UvrC Helix-hairpin-helix N-terminal WU11_09690 PF01066 CDP-alcohol phosphatidyltransferase WU11_09705 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term WU11_09705 PF14489 QueF-like protein WU11_09710 PF00463 Isocitrate lyase family WU11_09730 PF02653 Branched-chain amino acid transport system / permease component WU11_09735 PF13458 Periplasmic binding protein WU11_09740 PF00848 Ring hydroxylating alpha subunit (catalytic domain) WU11_09740 PF00355 Rieske [2Fe-2S] domain WU11_09745 PF00866 Ring hydroxylating beta subunit WU11_09750 PF00378 Enoyl-CoA hydratase/isomerase WU11_09760 PF00111 2Fe-2S iron-sulfur cluster binding domain WU11_09765 PF02515 CoA-transferase family III WU11_09770 PF07859 alpha/beta hydrolase fold WU11_09775 PF00501 AMP-binding enzyme WU11_09775 PF14535 AMP-binding enzyme C-terminal domain WU11_09780 PF02803 Thiolase, C-terminal domain WU11_09780 PF00108 Thiolase, N-terminal domain WU11_09790 PF12228 Protein of unknown function (DUF3604) WU11_09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_09795 PF03466 LysR substrate binding domain WU11_09800 PF03401 Tripartite tricarboxylate transporter family receptor WU11_09820 PF01152 Bacterial-like globin WU11_09855 PF01425 Amidase WU11_09860 PF01425 Amidase WU11_09870 PF01522 Polysaccharide deacetylase WU11_09875 PF03401 Tripartite tricarboxylate transporter family receptor WU11_09900 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_09900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU11_09925 PF03466 LysR substrate binding domain WU11_09925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_09935 PF01799 [2Fe-2S] binding domain WU11_09935 PF00111 2Fe-2S iron-sulfur cluster binding domain WU11_09940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU11_09950 PF06719 AraC-type transcriptional regulator N-terminus WU11_09950 PF12833 Helix-turn-helix domain WU11_09970 PF07690 Major Facilitator Superfamily WU11_09985 PF00583 Acetyltransferase (GNAT) family WU11_09995 PF00005 ABC transporter WU11_09995 PF00664 ABC transporter transmembrane region WU11_10005 PF02535 ZIP Zinc transporter WU11_10020 PF00916 Sulfate permease family WU11_10020 PF01740 STAS domain WU11_10040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WU11_10040 PF03625 Domain of unknown function DUF302 WU11_10050 PF02805 Metal binding domain of Ada WU11_10050 PF12833 Helix-turn-helix domain WU11_10055 PF07237 Protein of unknown function (DUF1428) WU11_10060 PF02567 Phenazine biosynthesis-like protein WU11_10065 PF03466 LysR substrate binding domain WU11_10065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_10070 PF04286 Protein of unknown function (DUF445) WU11_10085 PF00171 Aldehyde dehydrogenase family WU11_10090 PF00158 Sigma-54 interaction domain WU11_10090 PF02954 Bacterial regulatory protein, Fis family WU11_10090 PF01590 GAF domain WU11_10105 PF04172 LrgB-like family WU11_10110 PF03788 LrgA family WU11_10115 PF13649 Methyltransferase domain WU11_10125 PF00155 Aminotransferase class I and II WU11_10130 PF00202 Aminotransferase class-III WU11_10165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU11_10165 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP WU11_10170 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase WU11_10170 PF12801 4Fe-4S binding domain WU11_10170 PF13746 4Fe-4S dicluster domain WU11_10195 PF00005 ABC transporter WU11_10200 PF01061 ABC-2 type transporter WU11_10205 PF01594 AI-2E family transporter WU11_10235 PF04539 Sigma-70 region 3 WU11_10235 PF00140 Sigma-70 factor, region 1.2 WU11_10235 PF03979 Sigma-70 factor, region 1.1 WU11_10235 PF04546 Sigma-70, non-essential region WU11_10235 PF04545 Sigma-70, region 4 WU11_10235 PF04542 Sigma-70 region 2 WU11_10240 PF10410 DnaB-helicase binding domain of primase WU11_10240 PF08278 DNA primase DnaG DnaB-binding WU11_10240 PF08275 DNA primase catalytic core, N-terminal domain WU11_10240 PF01807 CHC2 zinc finger WU11_10245 PF01165 Ribosomal protein S21 WU11_10255 PF00709 Adenylosuccinate synthetase WU11_10260 PF13393 Histidyl-tRNA synthetase WU11_10265 PF01145 SPFH domain / Band 7 family WU11_10270 PF12221 Bacterial membrane protein N terminal WU11_10270 PF01145 SPFH domain / Band 7 family WU11_10275 PF16360 GTP-binding GTPase Middle Region WU11_10275 PF13167 GTP-binding GTPase N-terminal WU11_10275 PF01926 50S ribosome-binding GTPase WU11_10280 PF17209 Hfq protein WU11_10285 PF00155 Aminotransferase class I and II WU11_10290 PF01926 50S ribosome-binding GTPase WU11_10290 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WU11_10295 PF13360 PQQ-like domain WU11_10300 PF09976 Tetratricopeptide repeat-like domain WU11_10305 PF13393 Histidyl-tRNA synthetase WU11_10305 PF03129 Anticodon binding domain WU11_10310 PF04551 GcpE protein WU11_10320 PF04055 Radical SAM superfamily WU11_10325 PF00334 Nucleoside diphosphate kinase WU11_10330 PF10458 Valyl tRNA synthetase tRNA binding arm WU11_10330 PF08264 Anticodon-binding domain of tRNA WU11_10330 PF00133 tRNA synthetases class I (I, L, M and V) WU11_10345 PF00512 His Kinase A (phospho-acceptor) domain WU11_10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_10345 PF08521 Two-component sensor kinase N-terminal WU11_10365 PF00266 Aminotransferase class-V WU11_10370 PF01746 tRNA (Guanine-1)-methyltransferase WU11_10375 PF01782 RimM N-terminal domain WU11_10380 PF00886 Ribosomal protein S16 WU11_10390 PF01206 Sulfurtransferase TusA WU11_10395 PF01411 tRNA synthetases class II (A) WU11_10395 PF02272 DHHA1 domain WU11_10395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WU11_10440 PF01425 Amidase WU11_10445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_10445 PF00005 ABC transporter WU11_10450 PF00528 Binding-protein-dependent transport system inner membrane component WU11_10455 PF00528 Binding-protein-dependent transport system inner membrane component WU11_10460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_10475 PF03466 LysR substrate binding domain WU11_10475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_10480 PF13416 Bacterial extracellular solute-binding protein WU11_10485 PF01266 FAD dependent oxidoreductase WU11_10490 PF00970 Oxidoreductase FAD-binding domain WU11_10490 PF00111 2Fe-2S iron-sulfur cluster binding domain WU11_10490 PF00175 Oxidoreductase NAD-binding domain WU11_10495 PF02261 Aspartate decarboxylase WU11_10510 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WU11_10515 PF07005 Sugar-binding N-terminal domain WU11_10515 PF17042 Nucleotide-binding C-terminal domain WU11_10530 PF00378 Enoyl-CoA hydratase/isomerase WU11_10540 PF02142 MGS-like domain WU11_10545 PF04384 Iron-sulphur cluster assembly WU11_10550 PF00111 2Fe-2S iron-sulfur cluster binding domain WU11_10555 PF00012 Hsp70 protein WU11_10560 PF07743 HSCB C-terminal oligomerisation domain WU11_10565 PF01521 Iron-sulphur cluster biosynthesis WU11_10570 PF01592 NifU-like N terminal domain WU11_10575 PF00266 Aminotransferase class-V WU11_10580 PF02082 Transcriptional regulator WU11_10585 PF01451 Low molecular weight phosphotyrosine protein phosphatase WU11_10590 PF00271 Helicase conserved C-terminal domain WU11_10590 PF02151 UvrB/uvrC motif WU11_10590 PF17757 UvrB interaction domain WU11_10590 PF04851 Type III restriction enzyme, res subunit WU11_10590 PF12344 Ultra-violet resistance protein B WU11_10595 PF00155 Aminotransferase class I and II WU11_10600 PF00717 Peptidase S24-like WU11_10600 PF01726 LexA DNA binding domain WU11_10605 PF03797 Autotransporter beta-domain WU11_10605 PF03212 Pertactin WU11_10625 PF03401 Tripartite tricarboxylate transporter family receptor WU11_10630 PF01144 Coenzyme A transferase WU11_10635 PF01144 Coenzyme A transferase WU11_10655 PF00108 Thiolase, N-terminal domain WU11_10655 PF02803 Thiolase, C-terminal domain WU11_10665 PF00378 Enoyl-CoA hydratase/isomerase WU11_10675 PF03401 Tripartite tricarboxylate transporter family receptor WU11_10680 PF02515 CoA-transferase family III WU11_10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_10685 PF03466 LysR substrate binding domain WU11_10690 PF02190 ATP-dependent protease La (LON) substrate-binding domain WU11_10690 PF05362 Lon protease (S16) C-terminal proteolytic domain WU11_10690 PF00004 ATPase family associated with various cellular activities (AAA) WU11_10695 PF10431 C-terminal, D2-small domain, of ClpB protein WU11_10695 PF07724 AAA domain (Cdc48 subfamily) WU11_10695 PF06689 ClpX C4-type zinc finger WU11_10700 PF00574 Clp protease WU11_10705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WU11_10705 PF05698 Bacterial trigger factor protein (TF) C-terminus WU11_10705 PF05697 Bacterial trigger factor protein (TF) WU11_10710 PF03350 Uncharacterized protein family, UPF0114 WU11_10715 PF00313 'Cold-shock' DNA-binding domain WU11_10725 PF00313 'Cold-shock' DNA-binding domain WU11_10760 PF00132 Bacterial transferase hexapeptide (six repeats) WU11_10760 PF14602 Hexapeptide repeat of succinyl-transferase WU11_10760 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WU11_10765 PF07687 Peptidase dimerisation domain WU11_10765 PF01546 Peptidase family M20/M25/M40 WU11_10770 PF05175 Methyltransferase small domain WU11_10775 PF00005 ABC transporter WU11_10775 PF12848 ABC transporter WU11_10780 PF07715 TonB-dependent Receptor Plug Domain WU11_10785 PF00580 UvrD/REP helicase N-terminal domain WU11_10785 PF13361 UvrD-like helicase C-terminal domain WU11_10805 PF01189 16S rRNA methyltransferase RsmB/F WU11_10805 PF01029 NusB family WU11_10810 PF06574 FAD synthetase WU11_10810 PF01687 Riboflavin kinase WU11_10815 PF06827 Zinc finger found in FPG and IleRS WU11_10815 PF00133 tRNA synthetases class I (I, L, M and V) WU11_10815 PF08264 Anticodon-binding domain of tRNA WU11_10820 PF01252 Signal peptidase (SPase) II WU11_10825 PF04127 DNA / pantothenate metabolism flavoprotein WU11_10825 PF02441 Flavoprotein WU11_10835 PF01037 Lrp/AsnC ligand binding domain WU11_10850 PF13406 Transglycosylase SLT domain WU11_10855 PF04305 Protein of unknown function (DUF455) WU11_10885 PF05532 CsbD-like WU11_10895 PF04972 BON domain WU11_10910 PF13472 GDSL-like Lipase/Acylhydrolase family WU11_10915 PF13145 PPIC-type PPIASE domain WU11_10920 PF03009 Glycerophosphoryl diester phosphodiesterase family WU11_10925 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ WU11_10930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU11_10930 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_10935 PF00462 Glutaredoxin WU11_10935 PF08534 Redoxin WU11_10945 PF00376 MerR family regulatory protein WU11_10945 PF09278 MerR, DNA binding WU11_10950 PF05958 tRNA (Uracil-5-)-methyltransferase WU11_10970 PF01551 Peptidase family M23 WU11_10970 PF01476 LysM domain WU11_10980 PF01975 Survival protein SurE WU11_10985 PF02660 Glycerol-3-phosphate acyltransferase WU11_10995 PF00814 Glycoprotease family WU11_11000 PF00860 Permease family WU11_11010 PF00085 Thioredoxin WU11_11015 PF01205 Uncharacterized protein family UPF0029 WU11_11025 PF00583 Acetyltransferase (GNAT) family WU11_11030 PF12802 MarR family WU11_11040 PF00202 Aminotransferase class-III WU11_11045 PF16868 NMT1-like family WU11_11065 PF03797 Autotransporter beta-domain WU11_11075 PF13091 PLD-like domain WU11_11075 PF13396 Phospholipase_D-nuclease N-terminal WU11_11080 PF01740 STAS domain WU11_11085 PF13581 Histidine kinase-like ATPase domain WU11_11090 PF00842 Alanine racemase, C-terminal domain WU11_11090 PF01168 Alanine racemase, N-terminal domain WU11_11100 PF00672 HAMP domain WU11_11100 PF07228 Stage II sporulation protein E (SpoIIE) WU11_11120 PF08281 Sigma-70, region 4 WU11_11120 PF04542 Sigma-70 region 2 WU11_11135 PF01312 FlhB HrpN YscU SpaS Family WU11_11140 PF01311 Bacterial export proteins, family 1 WU11_11145 PF01313 Bacterial export proteins, family 3 WU11_11150 PF00813 FliP family WU11_11155 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WU11_11170 PF18269 T3SS EscN ATPase C-terminal domain WU11_11170 PF02874 ATP synthase alpha/beta family, beta-barrel domain WU11_11170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU11_11175 PF02108 Flagellar assembly protein FliH WU11_11185 PF01514 Secretory protein of YscJ/FliF family WU11_11250 PF00771 FHIPEP family WU11_11280 PF01272 Transcription elongation factor, GreA/GreB, C-term WU11_11280 PF03449 Transcription elongation factor, N-terminal WU11_11285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU11_11285 PF00672 HAMP domain WU11_11285 PF02203 Tar ligand binding domain homologue WU11_11290 PF00860 Permease family WU11_11310 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_11320 PF13419 Haloacid dehalogenase-like hydrolase WU11_11325 PF00528 Binding-protein-dependent transport system inner membrane component WU11_11330 PF08402 TOBE domain WU11_11330 PF00005 ABC transporter WU11_11335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_11335 PF03466 LysR substrate binding domain WU11_11345 PF00581 Rhodanese-like domain WU11_11355 PF01435 Peptidase family M48 WU11_11360 PF08240 Alcohol dehydrogenase GroES-like domain WU11_11360 PF00107 Zinc-binding dehydrogenase WU11_11365 PF00892 EamA-like transporter family WU11_11375 PF01047 MarR family WU11_11385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU11_11385 PF00529 HlyD membrane-fusion protein of T1SS WU11_11390 PF07690 Major Facilitator Superfamily WU11_11395 PF00180 Isocitrate/isopropylmalate dehydrogenase WU11_11400 PF00392 Bacterial regulatory proteins, gntR family WU11_11400 PF00155 Aminotransferase class I and II WU11_11405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_11410 PF00528 Binding-protein-dependent transport system inner membrane component WU11_11415 PF00528 Binding-protein-dependent transport system inner membrane component WU11_11415 PF12911 N-terminal TM domain of oligopeptide transport permease C WU11_11420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_11420 PF00005 ABC transporter WU11_11430 PF00202 Aminotransferase class-III WU11_11435 PF07883 Cupin domain WU11_11440 PF00850 Histone deacetylase domain WU11_11445 PF07687 Peptidase dimerisation domain WU11_11445 PF01546 Peptidase family M20/M25/M40 WU11_11455 PF00171 Aldehyde dehydrogenase family WU11_11460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU11_11465 PF00202 Aminotransferase class-III WU11_11470 PF01235 Sodium:alanine symporter family WU11_11475 PF05872 Bacterial protein of unknown function (DUF853) WU11_11480 PF01709 Transcriptional regulator WU11_11485 PF02843 Phosphoribosylglycinamide synthetase, C domain WU11_11485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WU11_11485 PF02844 Phosphoribosylglycinamide synthetase, N domain WU11_11490 PF01218 Coproporphyrinogen III oxidase WU11_11495 PF01467 Cytidylyltransferase-like WU11_11505 PF02590 Predicted SPOUT methyltransferase WU11_11510 PF02545 Maf-like protein WU11_11515 PF03797 Autotransporter beta-domain WU11_11515 PF03212 Pertactin WU11_11550 PF00575 S1 RNA binding domain WU11_11550 PF10150 Ribonuclease E/G family WU11_11555 PF01842 ACT domain WU11_11555 PF00800 Prephenate dehydratase WU11_11565 PF07690 Major Facilitator Superfamily WU11_11570 PF00005 ABC transporter WU11_11570 PF00664 ABC transporter transmembrane region WU11_11575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WU11_11585 PF03692 Putative zinc- or iron-chelating domain WU11_11600 PF00884 Sulfatase WU11_11605 PF00534 Glycosyl transferases group 1 WU11_11605 PF13439 Glycosyltransferase Family 4 WU11_11610 PF00535 Glycosyl transferase family 2 WU11_11615 PF01522 Polysaccharide deacetylase WU11_11620 PF13439 Glycosyltransferase Family 4 WU11_11620 PF00534 Glycosyl transferases group 1 WU11_11625 PF07733 Bacterial DNA polymerase III alpha NTPase domain WU11_11625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WU11_11625 PF14579 Helix-hairpin-helix motif WU11_11625 PF02811 PHP domain WU11_11625 PF01336 OB-fold nucleic acid binding domain WU11_11635 PF00271 Helicase conserved C-terminal domain WU11_11635 PF04408 Helicase associated domain (HA2) WU11_11635 PF11898 Domain of unknown function (DUF3418) WU11_11635 PF00270 DEAD/DEAH box helicase WU11_11635 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold WU11_11640 PF00583 Acetyltransferase (GNAT) family WU11_11640 PF00696 Amino acid kinase family WU11_11645 PF04362 Bacterial Fe(2+) trafficking WU11_11650 PF04185 Phosphoesterase family WU11_11650 PF05506 Domain of unknown function (DUF756) WU11_11655 PF01895 PhoU domain WU11_11660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) WU11_11665 PF18158 Adaptive response protein AidB N-terminal domain WU11_11665 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_11665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_11670 PF02646 RmuC family WU11_11680 PF02245 Methylpurine-DNA glycosylase (MPG) WU11_11690 PF00528 Binding-protein-dependent transport system inner membrane component WU11_11695 PF00528 Binding-protein-dependent transport system inner membrane component WU11_11700 PF08402 TOBE domain WU11_11700 PF00005 ABC transporter WU11_11705 PF13416 Bacterial extracellular solute-binding protein WU11_11725 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_11735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU11_11755 PF00285 Citrate synthase, C-terminal domain WU11_11760 PF03937 Flavinator of succinate dehydrogenase WU11_11765 PF13085 2Fe-2S iron-sulfur cluster binding domain WU11_11770 PF02910 Fumarate reductase flavoprotein C-term WU11_11770 PF00890 FAD binding domain WU11_11775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WU11_11780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WU11_11785 PF00392 Bacterial regulatory proteins, gntR family WU11_11785 PF07702 UTRA domain WU11_11790 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WU11_11790 PF00056 lactate/malate dehydrogenase, NAD binding domain WU11_11800 PF00285 Citrate synthase, C-terminal domain WU11_11805 PF00694 Aconitase C-terminal domain WU11_11805 PF00330 Aconitase family (aconitate hydratase) WU11_11810 PF04303 PrpF protein WU11_11815 PF03972 MmgE/PrpD family WU11_11825 PF01170 Putative RNA methylase family UPF0020 WU11_11825 PF02926 THUMP domain WU11_11845 PF16177 Acetyl-coenzyme A synthetase N-terminus WU11_11845 PF00501 AMP-binding enzyme WU11_11845 PF13193 AMP-binding enzyme C-terminal domain WU11_11855 PF01430 Hsp33 protein WU11_11880 PF00211 Adenylate and Guanylate cyclase catalytic domain WU11_11885 PF04977 Septum formation initiator WU11_11890 PF00113 Enolase, C-terminal TIM barrel domain WU11_11890 PF03952 Enolase, N-terminal domain WU11_11900 PF00793 DAHP synthetase I family WU11_11905 PF06418 CTP synthase N-terminus WU11_11905 PF00117 Glutamine amidotransferase class-I WU11_11915 PF00557 Metallopeptidase family M24 WU11_11915 PF01321 Creatinase/Prolidase N-terminal domain WU11_11925 PF03576 Peptidase family S58 WU11_11930 PF00528 Binding-protein-dependent transport system inner membrane component WU11_11930 PF12911 N-terminal TM domain of oligopeptide transport permease C WU11_11935 PF00528 Binding-protein-dependent transport system inner membrane component WU11_11940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_11945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_11945 PF00005 ABC transporter WU11_11950 PF01112 Asparaginase WU11_11960 PF01144 Coenzyme A transferase WU11_11980 PF16363 GDP-mannose 4,6 dehydratase WU11_11995 PF01212 Beta-eliminating lyase WU11_12000 PF00892 EamA-like transporter family WU11_12005 PF00501 AMP-binding enzyme WU11_12005 PF16177 Acetyl-coenzyme A synthetase N-terminus WU11_12005 PF13193 AMP-binding enzyme C-terminal domain WU11_12015 PF03928 Haem-degrading WU11_12020 PF13193 AMP-binding enzyme C-terminal domain WU11_12020 PF16177 Acetyl-coenzyme A synthetase N-terminus WU11_12020 PF00501 AMP-binding enzyme WU11_12025 PF00877 NlpC/P60 family WU11_12040 PF03466 LysR substrate binding domain WU11_12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_12045 PF00171 Aldehyde dehydrogenase family WU11_12055 PF03466 LysR substrate binding domain WU11_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_12065 PF02789 Cytosol aminopeptidase family, N-terminal domain WU11_12065 PF00883 Cytosol aminopeptidase family, catalytic domain WU11_12070 PF04364 DNA polymerase III chi subunit, HolC WU11_12080 PF01027 Inhibitor of apoptosis-promoting Bax1 WU11_12085 PF03401 Tripartite tricarboxylate transporter family receptor WU11_12100 PF00291 Pyridoxal-phosphate dependent enzyme WU11_12110 PF11967 Recombination protein O N terminal WU11_12110 PF02565 Recombination protein O C terminal WU11_12115 PF01926 50S ribosome-binding GTPase WU11_12115 PF07650 KH domain WU11_12120 PF00035 Double-stranded RNA binding motif WU11_12120 PF14622 Ribonuclease-III-like WU11_12125 PF10502 Signal peptidase, peptidase S26 WU11_12130 PF06421 GTP-binding protein LepA C-terminus WU11_12130 PF03144 Elongation factor Tu domain 2 WU11_12130 PF00009 Elongation factor Tu GTP binding domain WU11_12130 PF00679 Elongation factor G C-terminus WU11_12135 PF17820 PDZ domain WU11_12135 PF13180 PDZ domain WU11_12150 PF04542 Sigma-70 region 2 WU11_12150 PF08281 Sigma-70, region 4 WU11_12160 PF02801 Beta-ketoacyl synthase, C-terminal domain WU11_12160 PF00109 Beta-ketoacyl synthase, N-terminal domain WU11_12165 PF00550 Phosphopantetheine attachment site WU11_12175 PF00698 Acyl transferase domain WU11_12180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WU11_12180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WU11_12185 PF02504 Fatty acid synthesis protein WU11_12190 PF01783 Ribosomal L32p protein family WU11_12195 PF02620 Large ribosomal RNA subunit accumulation protein YceD WU11_12200 PF02545 Maf-like protein WU11_12210 PF01510 N-acetylmuramoyl-L-alanine amidase WU11_12225 PF03883 Peroxide stress protein YaaA WU11_12235 PF00106 short chain dehydrogenase WU11_12240 PF02254 TrkA-N domain WU11_12240 PF00999 Sodium/hydrogen exchanger family WU11_12250 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) WU11_12280 PF07690 Major Facilitator Superfamily WU11_12285 PF07660 Secretin and TonB N terminus short domain WU11_12285 PF07715 TonB-dependent Receptor Plug Domain WU11_12285 PF00593 TonB dependent receptor WU11_12300 PF00990 Diguanylate cyclase, GGDEF domain WU11_12300 PF17151 Periplasmic sensor domain WU11_12325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WU11_12325 PF02403 Seryl-tRNA synthetase N-terminal domain WU11_12330 PF16193 AAA C-terminal domain WU11_12330 PF00004 ATPase family associated with various cellular activities (AAA) WU11_12330 PF12002 MgsA AAA+ ATPase C terminal WU11_12335 PF03548 Outer membrane lipoprotein carrier protein LolA WU11_12340 PF09397 Ftsk gamma domain WU11_12340 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WU11_12340 PF01580 FtsK/SpoIIIE family WU11_12340 PF17854 FtsK alpha domain WU11_12345 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_12350 PF01713 Smr domain WU11_12350 PF00488 MutS domain V WU11_12355 PF00893 Small Multidrug Resistance protein WU11_12370 PF00474 Sodium:solute symporter family WU11_12380 PF03814 Potassium-transporting ATPase A subunit WU11_12390 PF02669 K+-transporting ATPase, c chain WU11_12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_12395 PF13493 Domain of unknown function (DUF4118) WU11_12395 PF02702 Osmosensitive K+ channel His kinase sensor domain WU11_12395 PF13492 GAF domain WU11_12395 PF00512 His Kinase A (phospho-acceptor) domain WU11_12400 PF00072 Response regulator receiver domain WU11_12400 PF00486 Transcriptional regulatory protein, C terminal WU11_12420 PF00180 Isocitrate/isopropylmalate dehydrogenase WU11_12435 PF00034 Cytochrome c WU11_12445 PF17862 AAA+ lid domain WU11_12445 PF00004 ATPase family associated with various cellular activities (AAA) WU11_12445 PF01434 Peptidase family M41 WU11_12465 PF05193 Peptidase M16 inactive domain WU11_12465 PF00675 Insulinase (Peptidase family M16) WU11_12470 PF00684 DnaJ central domain WU11_12470 PF00226 DnaJ domain WU11_12470 PF01556 DnaJ C terminal domain WU11_12475 PF00012 Hsp70 protein WU11_12485 PF01025 GrpE WU11_12495 PF00762 Ferrochelatase WU11_12500 PF01628 HrcA protein C terminal domain WU11_12500 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding WU11_12505 PF01513 ATP-NAD kinase WU11_12510 PF02463 RecF/RecN/SMC N terminal domain WU11_12515 PF01475 Ferric uptake regulator family WU11_12520 PF04355 SmpA / OmlA family WU11_12525 PF01113 Dihydrodipicolinate reductase, N-terminus WU11_12525 PF05173 Dihydrodipicolinate reductase, C-terminus WU11_12530 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WU11_12530 PF01565 FAD binding domain WU11_12540 PF00561 alpha/beta hydrolase fold WU11_12550 PF03401 Tripartite tricarboxylate transporter family receptor WU11_12555 PF00551 Formyl transferase WU11_12565 PF17806 Sarcosine oxidase A3 domain WU11_12565 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_12565 PF08669 Glycine cleavage T-protein C-terminal barrel domain WU11_12565 PF01571 Aminomethyltransferase folate-binding domain WU11_12570 PF04267 Sarcosine oxidase, delta subunit family WU11_12575 PF01266 FAD dependent oxidoreductase WU11_12585 PF03466 LysR substrate binding domain WU11_12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_12590 PF02615 Malate/L-lactate dehydrogenase WU11_12595 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WU11_12595 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WU11_12600 PF03401 Tripartite tricarboxylate transporter family receptor WU11_12625 PF04972 BON domain WU11_12625 PF00263 Bacterial type II and III secretion system protein WU11_12625 PF13629 Pilus formation protein N terminal region WU11_12660 PF01557 Fumarylacetoacetate (FAA) hydrolase family WU11_12665 PF00719 Inorganic pyrophosphatase WU11_12685 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WU11_12685 PF03900 Porphobilinogen deaminase, C-terminal domain WU11_12695 PF03741 Integral membrane protein TerC family WU11_12700 PF03741 Integral membrane protein TerC family WU11_12705 PF00549 CoA-ligase WU11_12705 PF02629 CoA binding domain WU11_12710 PF08442 ATP-grasp domain WU11_12710 PF00549 CoA-ligase WU11_12720 PF08267 Cobalamin-independent synthase, N-terminal domain WU11_12720 PF01717 Cobalamin-independent synthase, Catalytic domain WU11_12725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_12725 PF03466 LysR substrate binding domain WU11_12730 PF02631 RecX family WU11_12735 PF00154 recA bacterial DNA recombination protein WU11_12740 PF00486 Transcriptional regulatory protein, C terminal WU11_12740 PF00072 Response regulator receiver domain WU11_12745 PF00512 His Kinase A (phospho-acceptor) domain WU11_12745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_12745 PF08521 Two-component sensor kinase N-terminal WU11_12750 PF08946 Osmosensory transporter coiled coil WU11_12750 PF00083 Sugar (and other) transporter WU11_12755 PF00378 Enoyl-CoA hydratase/isomerase WU11_12755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU11_12755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU11_12760 PF08402 TOBE domain WU11_12760 PF00005 ABC transporter WU11_12765 PF00528 Binding-protein-dependent transport system inner membrane component WU11_12775 PF00106 short chain dehydrogenase WU11_12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_12795 PF03466 LysR substrate binding domain WU11_12800 PF02515 CoA-transferase family III WU11_12810 PF04381 Putative exonuclease, RdgC WU11_12815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WU11_12815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WU11_12835 PF04231 Endonuclease I WU11_12885 PF00216 Bacterial DNA-binding protein WU11_12890 PF03484 tRNA synthetase B5 domain WU11_12890 PF03483 B3/4 domain WU11_12890 PF03147 Ferredoxin-fold anticodon binding domain WU11_12890 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WU11_12890 PF01588 Putative tRNA binding domain WU11_12895 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WU11_12895 PF01409 tRNA synthetases class II core domain (F) WU11_12900 PF00453 Ribosomal protein L20 WU11_12905 PF01632 Ribosomal protein L35 WU11_12915 PF00692 dUTPase WU11_12925 PF00392 Bacterial regulatory proteins, gntR family WU11_12925 PF00155 Aminotransferase class I and II WU11_12940 PF13847 Methyltransferase domain WU11_12950 PF09335 SNARE associated Golgi protein WU11_12975 PF00356 Bacterial regulatory proteins, lacI family WU11_12980 PF00005 ABC transporter WU11_12980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_12990 PF00528 Binding-protein-dependent transport system inner membrane component WU11_12995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_13000 PF07687 Peptidase dimerisation domain WU11_13000 PF01546 Peptidase family M20/M25/M40 WU11_13010 PF01810 LysE type translocator WU11_13020 PF00392 Bacterial regulatory proteins, gntR family WU11_13020 PF00155 Aminotransferase class I and II WU11_13025 PF07690 Major Facilitator Superfamily WU11_13030 PF08240 Alcohol dehydrogenase GroES-like domain WU11_13030 PF00107 Zinc-binding dehydrogenase WU11_13045 PF03466 LysR substrate binding domain WU11_13045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_13050 PF12833 Helix-turn-helix domain WU11_13050 PF01965 DJ-1/PfpI family WU11_13055 PF12706 Beta-lactamase superfamily domain WU11_13070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WU11_13070 PF00753 Metallo-beta-lactamase superfamily WU11_13070 PF10996 Beta-Casp domain WU11_13075 PF01740 STAS domain WU11_13075 PF00916 Sulfate permease family WU11_13105 PF00528 Binding-protein-dependent transport system inner membrane component WU11_13110 PF00005 ABC transporter WU11_13120 PF01979 Amidohydrolase family WU11_13135 PF07690 Major Facilitator Superfamily WU11_13145 PF07804 HipA-like C-terminal domain WU11_13145 PF13657 HipA N-terminal domain WU11_13155 PF02540 NAD synthase WU11_13155 PF00117 Glutamine amidotransferase class-I WU11_13155 PF00958 GMP synthase C terminal domain WU11_13160 PF00571 CBS domain WU11_13160 PF00478 IMP dehydrogenase / GMP reductase domain WU11_13180 PF00072 Response regulator receiver domain WU11_13180 PF00196 Bacterial regulatory proteins, luxR family WU11_13205 PF12320 Type 5 capsule protein repressor C-terminal domain WU11_13205 PF00149 Calcineurin-like phosphoesterase WU11_13210 PF01266 FAD dependent oxidoreductase WU11_13215 PF01037 Lrp/AsnC ligand binding domain WU11_13240 PF00528 Binding-protein-dependent transport system inner membrane component WU11_13250 PF17912 MalK OB fold domain WU11_13250 PF00005 ABC transporter WU11_13260 PF08220 DeoR-like helix-turn-helix domain WU11_13260 PF00455 DeoR C terminal sensor domain WU11_13265 PF01266 FAD dependent oxidoreductase WU11_13265 PF16901 C-terminal domain of alpha-glycerophosphate oxidase WU11_13280 PF03401 Tripartite tricarboxylate transporter family receptor WU11_13285 PF14537 Cytochrome c3 WU11_13285 PF00890 FAD binding domain WU11_13310 PF03401 Tripartite tricarboxylate transporter family receptor WU11_13315 PF00701 Dihydrodipicolinate synthetase family WU11_13335 PF00472 RF-1 domain WU11_13345 PF01242 6-pyruvoyl tetrahydropterin synthase WU11_13350 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_13355 PF00596 Class II Aldolase and Adducin N-terminal domain WU11_13380 PF13332 Hemagglutinin repeat WU11_13380 PF13018 Extended Signal Peptide of Type V secretion system WU11_13380 PF05594 Haemagluttinin repeat WU11_13380 PF05860 haemagglutination activity domain WU11_13385 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal WU11_13385 PF02769 AIR synthase related protein, C-terminal domain WU11_13385 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WU11_13390 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU11_13395 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU11_13400 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_13415 PF16970 Type-1 fimbrial protein, A WU11_13425 PF03061 Thioesterase superfamily WU11_13430 PF00378 Enoyl-CoA hydratase/isomerase WU11_13435 PF00171 Aldehyde dehydrogenase family WU11_13450 PF01883 Iron-sulfur cluster assembly protein WU11_13455 PF05138 Phenylacetic acid catabolic protein WU11_13460 PF06243 Phenylacetic acid degradation B WU11_13465 PF05138 Phenylacetic acid catabolic protein WU11_13470 PF07848 PaaX-like protein WU11_13470 PF08223 PaaX-like protein C-terminal domain WU11_13475 PF03853 YjeF-related protein N-terminus WU11_13480 PF00929 Exonuclease WU11_13485 PF01435 Peptidase family M48 WU11_13490 PF03193 RsgA GTPase WU11_13500 PF00528 Binding-protein-dependent transport system inner membrane component WU11_13505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_13515 PF03466 LysR substrate binding domain WU11_13515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_13540 PF00543 Nitrogen regulatory protein P-II WU11_13545 PF00795 Carbon-nitrogen hydrolase WU11_13545 PF02540 NAD synthase WU11_13550 PF00924 Mechanosensitive ion channel WU11_13555 PF14698 Argininosuccinate lyase C-terminal WU11_13555 PF00206 Lyase WU11_13575 PF04055 Radical SAM superfamily WU11_13575 PF06463 Molybdenum Cofactor Synthesis C WU11_13580 PF03453 MoeA N-terminal region (domain I and II) WU11_13580 PF03454 MoeA C-terminal region (domain IV) WU11_13580 PF00994 Probable molybdopterin binding domain WU11_13585 PF00994 Probable molybdopterin binding domain WU11_13590 PF02391 MoaE protein WU11_13600 PF01967 MoaC family WU11_13610 PF01738 Dienelactone hydrolase family WU11_13620 PF08534 Redoxin WU11_13635 PF04055 Radical SAM superfamily WU11_13635 PF06968 Biotin and Thiamin Synthesis associated domain WU11_13655 PF00403 Heavy-metal-associated domain WU11_13660 PF13411 MerR HTH family regulatory protein WU11_13685 PF02104 SURF1 family WU11_13690 PF03626 Prokaryotic Cytochrome C oxidase subunit IV WU11_13695 PF00510 Cytochrome c oxidase subunit III WU11_13700 PF00115 Cytochrome C and Quinol oxidase polypeptide I WU11_13710 PF07690 Major Facilitator Superfamily WU11_13710 PF00083 Sugar (and other) transporter WU11_13725 PF04380 Membrane fusogenic activity WU11_13730 PF00543 Nitrogen regulatory protein P-II WU11_13740 PF03212 Pertactin WU11_13740 PF03797 Autotransporter beta-domain WU11_13750 PF00440 Bacterial regulatory proteins, tetR family WU11_13755 PF07690 Major Facilitator Superfamily WU11_13760 PF00005 ABC transporter WU11_13765 PF00005 ABC transporter WU11_13765 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_13770 PF02653 Branched-chain amino acid transport system / permease component WU11_13770 PF11862 Domain of unknown function (DUF3382) WU11_13775 PF02653 Branched-chain amino acid transport system / permease component WU11_13780 PF13458 Periplasmic binding protein WU11_13790 PF00171 Aldehyde dehydrogenase family WU11_13790 PF01619 Proline dehydrogenase WU11_13790 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WU11_13790 PF14850 DNA-binding domain of Proline dehydrogenase WU11_13800 PF02470 MlaD protein WU11_13805 PF04403 Paraquat-inducible protein A WU11_13810 PF10431 C-terminal, D2-small domain, of ClpB protein WU11_13810 PF02861 Clp amino terminal domain, pathogenicity island component WU11_13810 PF00004 ATPase family associated with various cellular activities (AAA) WU11_13810 PF07724 AAA domain (Cdc48 subfamily) WU11_13810 PF17871 AAA lid domain WU11_13815 PF00905 Penicillin binding protein transpeptidase domain WU11_13815 PF06832 Penicillin-Binding Protein C-terminus Family WU11_13815 PF00912 Transglycosylase WU11_13820 PF01835 MG2 domain WU11_13820 PF00207 Alpha-2-macroglobulin family WU11_13820 PF07703 Alpha-2-macroglobulin bait region domain WU11_13820 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain WU11_13820 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain WU11_13820 PF17962 Bacterial macroglobulin domain 6 WU11_13820 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain WU11_13820 PF11974 Bacterial alpha-2-macroglobulin MG3 domain WU11_13825 PF02617 ATP-dependent Clp protease adaptor protein ClpS WU11_13830 PF00313 'Cold-shock' DNA-binding domain WU11_13840 PF00108 Thiolase, N-terminal domain WU11_13840 PF02803 Thiolase, C-terminal domain WU11_13845 PF00654 Voltage gated chloride channel WU11_13850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WU11_13850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WU11_13855 PF02601 Exonuclease VII, large subunit WU11_13855 PF13742 OB-fold nucleic acid binding domain WU11_13865 PF01618 MotA/TolQ/ExbB proton channel family WU11_13870 PF02472 Biopolymer transport protein ExbD/TolR WU11_13875 PF02606 Tetraacyldisaccharide-1-P 4'-kinase WU11_13880 PF03966 Trm112p-like protein WU11_13885 PF02348 Cytidylyltransferase WU11_13890 PF05191 Adenylate kinase, active site lid WU11_13895 PF00106 short chain dehydrogenase WU11_13900 PF03023 Lipid II flippase MurJ WU11_13910 PF01649 Ribosomal protein S20 WU11_13915 PF03328 HpcH/HpaI aldolase/citrate lyase family WU11_13940 PF02615 Malate/L-lactate dehydrogenase WU11_13955 PF00291 Pyridoxal-phosphate dependent enzyme WU11_13955 PF14821 Threonine synthase N terminus WU11_13960 PF01842 ACT domain WU11_13960 PF03447 Homoserine dehydrogenase, NAD binding domain WU11_13960 PF00742 Homoserine dehydrogenase WU11_13965 PF00155 Aminotransferase class I and II WU11_13970 PF04430 Protein of unknown function (DUF498/DUF598) WU11_13975 PF00578 AhpC/TSA family WU11_13980 PF13638 PIN domain WU11_13980 PF02562 PhoH-like protein WU11_13985 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WU11_13990 PF13593 SBF-like CPA transporter family (DUF4137) WU11_13995 PF03796 DnaB-like helicase C terminal domain WU11_13995 PF00772 DnaB-like helicase N terminal domain WU11_14005 PF03948 Ribosomal protein L9, C-terminal domain WU11_14005 PF01281 Ribosomal protein L9, N-terminal domain WU11_14010 PF01084 Ribosomal protein S18 WU11_14020 PF01250 Ribosomal protein S6 WU11_14025 PF02649 Type I GTP cyclohydrolase folE2 WU11_14030 PF02779 Transketolase, pyrimidine binding domain WU11_14030 PF02780 Transketolase, C-terminal domain WU11_14030 PF13292 1-deoxy-D-xylulose-5-phosphate synthase WU11_14035 PF00348 Polyprenyl synthetase WU11_14040 PF02609 Exonuclease VII small subunit WU11_14050 PF03401 Tripartite tricarboxylate transporter family receptor WU11_14070 PF00571 CBS domain WU11_14070 PF01769 Divalent cation transporter WU11_14070 PF03448 MgtE intracellular N domain WU11_14075 PF03061 Thioesterase superfamily WU11_14080 PF03601 Conserved hypothetical protein 698 WU11_14085 PF03466 LysR substrate binding domain WU11_14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_14090 PF01546 Peptidase family M20/M25/M40 WU11_14090 PF07687 Peptidase dimerisation domain WU11_14095 PF13193 AMP-binding enzyme C-terminal domain WU11_14095 PF00501 AMP-binding enzyme WU11_14105 PF00459 Inositol monophosphatase family WU11_14115 PF01055 Glycosyl hydrolases family 31 WU11_14115 PF13802 Galactose mutarotase-like WU11_14120 PF00005 ABC transporter WU11_14120 PF09383 NIL domain WU11_14125 PF00528 Binding-protein-dependent transport system inner membrane component WU11_14130 PF03180 NLPA lipoprotein WU11_14145 PF00465 Iron-containing alcohol dehydrogenase WU11_14170 PF00392 Bacterial regulatory proteins, gntR family WU11_14170 PF07729 FCD domain WU11_14175 PF03401 Tripartite tricarboxylate transporter family receptor WU11_14195 PF14785 Maltose transport system permease protein MalF P2 domain WU11_14195 PF00528 Binding-protein-dependent transport system inner membrane component WU11_14200 PF00528 Binding-protein-dependent transport system inner membrane component WU11_14205 PF08402 TOBE domain WU11_14205 PF00005 ABC transporter WU11_14220 PF01547 Bacterial extracellular solute-binding protein WU11_14235 PF00376 MerR family regulatory protein WU11_14235 PF09278 MerR, DNA binding WU11_14240 PF03352 Methyladenine glycosylase WU11_14245 PF05170 AsmA family WU11_14255 PF00440 Bacterial regulatory proteins, tetR family WU11_14300 PF03466 LysR substrate binding domain WU11_14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_14305 PF02548 Ketopantoate hydroxymethyltransferase WU11_14310 PF13609 Gram-negative porin WU11_14330 PF00083 Sugar (and other) transporter WU11_14340 PF03466 LysR substrate binding domain WU11_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_14345 PF00155 Aminotransferase class I and II WU11_14350 PF01966 HD domain WU11_14355 PF00403 Heavy-metal-associated domain WU11_14375 PF08240 Alcohol dehydrogenase GroES-like domain WU11_14375 PF00107 Zinc-binding dehydrogenase WU11_14390 PF00005 ABC transporter WU11_14395 PF00528 Binding-protein-dependent transport system inner membrane component WU11_14405 PF00501 AMP-binding enzyme WU11_14405 PF13193 AMP-binding enzyme C-terminal domain WU11_14415 PF13404 AsnC-type helix-turn-helix domain WU11_14415 PF01037 Lrp/AsnC ligand binding domain WU11_14420 PF03401 Tripartite tricarboxylate transporter family receptor WU11_14425 PF00677 Lumazine binding domain WU11_14430 PF01425 Amidase WU11_14445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_14445 PF03466 LysR substrate binding domain WU11_14450 PF07690 Major Facilitator Superfamily WU11_14455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WU11_14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_14465 PF03466 LysR substrate binding domain WU11_14485 PF00005 ABC transporter WU11_14500 PF02653 Branched-chain amino acid transport system / permease component WU11_14505 PF01042 Endoribonuclease L-PSP WU11_14520 PF01614 Bacterial transcriptional regulator WU11_14520 PF09339 IclR helix-turn-helix domain WU11_14535 PF00005 ABC transporter WU11_14540 PF00528 Binding-protein-dependent transport system inner membrane component WU11_14555 PF00378 Enoyl-CoA hydratase/isomerase WU11_14560 PF02515 CoA-transferase family III WU11_14565 PF01425 Amidase WU11_14575 PF00392 Bacterial regulatory proteins, gntR family WU11_14575 PF07729 FCD domain WU11_14585 PF01594 AI-2E family transporter WU11_14605 PF01322 Cytochrome C' WU11_14610 PF08328 Adenylosuccinate lyase C-terminal WU11_14610 PF00206 Lyase WU11_14615 PF13417 Glutathione S-transferase, N-terminal domain WU11_14615 PF00043 Glutathione S-transferase, C-terminal domain WU11_14620 PF01925 Sulfite exporter TauE/SafE WU11_14630 PF03466 LysR substrate binding domain WU11_14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_14635 PF03401 Tripartite tricarboxylate transporter family receptor WU11_14645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WU11_14645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WU11_14650 PF02233 NAD(P) transhydrogenase beta subunit WU11_14660 PF07715 TonB-dependent Receptor Plug Domain WU11_14660 PF00593 TonB dependent receptor WU11_14665 PF00756 Putative esterase WU11_14670 PF02754 Cysteine-rich domain WU11_14670 PF13183 4Fe-4S dicluster domain WU11_14675 PF01565 FAD binding domain WU11_14680 PF02913 FAD linked oxidases, C-terminal domain WU11_14680 PF01565 FAD binding domain WU11_14685 PF02913 FAD linked oxidases, C-terminal domain WU11_14685 PF01565 FAD binding domain WU11_14690 PF05860 haemagglutination activity domain WU11_14690 PF13018 Extended Signal Peptide of Type V secretion system WU11_14690 PF05860 haemagglutination activity domain WU11_14690 PF05594 Haemagluttinin repeat WU11_14690 PF13018 Extended Signal Peptide of Type V secretion system WU11_14690 PF13332 Hemagglutinin repeat WU11_14690 PF05594 Haemagluttinin repeat WU11_14690 PF13332 Hemagglutinin repeat WU11_14695 PF00793 DAHP synthetase I family WU11_14700 PF01523 Putative modulator of DNA gyrase WU11_14705 PF00795 Carbon-nitrogen hydrolase WU11_14725 PF04542 Sigma-70 region 2 WU11_14725 PF08281 Sigma-70, region 4 WU11_14735 PF04461 Protein of unknown function (DUF520) WU11_14750 PF01551 Peptidase family M23 WU11_14750 PF01476 LysM domain WU11_14765 PF07715 TonB-dependent Receptor Plug Domain WU11_14765 PF00593 TonB dependent receptor WU11_14780 PF05114 Protein of unknown function (DUF692) WU11_14800 PF01022 Bacterial regulatory protein, arsR family WU11_14805 PF03626 Prokaryotic Cytochrome C oxidase subunit IV WU11_14810 PF00510 Cytochrome c oxidase subunit III WU11_14815 PF00115 Cytochrome C and Quinol oxidase polypeptide I WU11_14820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WU11_14820 PF06481 COX Aromatic Rich Motif WU11_14825 PF00072 Response regulator receiver domain WU11_14840 PF05726 Pirin C-terminal cupin domain WU11_14840 PF02678 Pirin WU11_14860 PF02515 CoA-transferase family III WU11_14865 PF03466 LysR substrate binding domain WU11_14865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_14870 PF03401 Tripartite tricarboxylate transporter family receptor WU11_14880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_14880 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_14880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_14880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_14880 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_14880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_14895 PF01872 RibD C-terminal domain WU11_14895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WU11_14910 PF03477 ATP cone domain WU11_14915 PF00464 Serine hydroxymethyltransferase WU11_14925 PF01479 S4 domain WU11_14925 PF00579 tRNA synthetases class I (W and Y) WU11_14935 PF01551 Peptidase family M23 WU11_14935 PF08460 Bacterial SH3 domain WU11_14940 PF03702 Anhydro-N-acetylmuramic acid kinase WU11_14945 PF01521 Iron-sulphur cluster biosynthesis WU11_14955 PF01118 Semialdehyde dehydrogenase, NAD binding domain WU11_14955 PF02774 Semialdehyde dehydrogenase, dimerisation domain WU11_14960 PF00380 Ribosomal protein S9/S16 WU11_14965 PF00572 Ribosomal protein L13 WU11_14970 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_14975 PF01523 Putative modulator of DNA gyrase WU11_14980 PF04751 Protein of unknown function (DUF615) WU11_14985 PF02230 Phospholipase/Carboxylesterase WU11_14995 PF00005 ABC transporter WU11_15000 PF00528 Binding-protein-dependent transport system inner membrane component WU11_15005 PF00857 Isochorismatase family WU11_15010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WU11_15015 PF00271 Helicase conserved C-terminal domain WU11_15015 PF00270 DEAD/DEAH box helicase WU11_15015 PF03880 DbpA RNA binding domain WU11_15025 PF00392 Bacterial regulatory proteins, gntR family WU11_15025 PF07729 FCD domain WU11_15035 PF13607 Succinyl-CoA ligase like flavodoxin domain WU11_15035 PF13380 CoA binding domain WU11_15035 PF00583 Acetyltransferase (GNAT) family WU11_15040 PF00749 tRNA synthetases class I (E and Q), catalytic domain WU11_15055 PF01037 Lrp/AsnC ligand binding domain WU11_15070 PF03477 ATP cone domain WU11_15070 PF00317 Ribonucleotide reductase, all-alpha domain WU11_15070 PF02867 Ribonucleotide reductase, barrel domain WU11_15075 PF00268 Ribonucleotide reductase, small chain WU11_15090 PF00501 AMP-binding enzyme WU11_15090 PF13193 AMP-binding enzyme C-terminal domain WU11_15095 PF03062 MBOAT, membrane-bound O-acyltransferase family WU11_15120 PF00294 pfkB family carbohydrate kinase WU11_15135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU11_15135 PF00289 Biotin carboxylase, N-terminal domain WU11_15135 PF02785 Biotin carboxylase C-terminal domain WU11_15140 PF00364 Biotin-requiring enzyme WU11_15145 PF01220 Dehydroquinase class II WU11_15150 PF08534 Redoxin WU11_15155 PF01225 Mur ligase family, catalytic domain WU11_15155 PF08245 Mur ligase middle domain WU11_15155 PF02875 Mur ligase family, glutamate ligase domain WU11_15160 PF05728 Uncharacterised protein family (UPF0227) WU11_15165 PF00773 RNB domain WU11_15175 PF08501 Shikimate dehydrogenase substrate binding domain WU11_15175 PF01488 Shikimate / quinate 5-dehydrogenase WU11_15175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain WU11_15185 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP WU11_15195 PF01037 Lrp/AsnC ligand binding domain WU11_15200 PF01266 FAD dependent oxidoreductase WU11_15205 PF00106 short chain dehydrogenase WU11_15215 PF03401 Tripartite tricarboxylate transporter family receptor WU11_15225 PF02810 SEC-C motif WU11_15225 PF07517 SecA DEAD-like domain WU11_15225 PF07516 SecA Wing and Scaffold domain WU11_15225 PF01043 SecA preprotein cross-linking domain WU11_15230 PF01476 LysM domain WU11_15230 PF08525 Opacity-associated protein A N-terminal motif WU11_15230 PF01551 Peptidase family M23 WU11_15240 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase WU11_15245 PF12327 FtsZ family, C-terminal domain WU11_15245 PF00091 Tubulin/FtsZ family, GTPase domain WU11_15250 PF02491 SHS2 domain inserted in FTSA WU11_15255 PF03799 Cell division protein FtsQ WU11_15255 PF08478 POTRA domain, FtsQ-type WU11_15260 PF01820 D-ala D-ala ligase N-terminus WU11_15260 PF07478 D-ala D-ala ligase C-terminus WU11_15265 PF01225 Mur ligase family, catalytic domain WU11_15265 PF08245 Mur ligase middle domain WU11_15265 PF02875 Mur ligase family, glutamate ligase domain WU11_15270 PF03033 Glycosyltransferase family 28 N-terminal domain WU11_15270 PF04101 Glycosyltransferase family 28 C-terminal domain WU11_15275 PF01098 Cell cycle protein WU11_15280 PF08245 Mur ligase middle domain WU11_15280 PF02875 Mur ligase family, glutamate ligase domain WU11_15285 PF00953 Glycosyl transferase family 4 WU11_15290 PF02875 Mur ligase family, glutamate ligase domain WU11_15290 PF08245 Mur ligase middle domain WU11_15295 PF03717 Penicillin-binding Protein dimerisation domain WU11_15295 PF00905 Penicillin binding protein transpeptidase domain WU11_15300 PF04999 Cell division protein FtsL WU11_15305 PF01795 MraW methylase family WU11_15310 PF02381 MraZ protein, putative antitoxin-like WU11_15320 PF01979 Amidohydrolase family WU11_15325 PF01546 Peptidase family M20/M25/M40 WU11_15325 PF07687 Peptidase dimerisation domain WU11_15365 PF01037 Lrp/AsnC ligand binding domain WU11_15370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WU11_15375 PF01625 Peptide methionine sulfoxide reductase WU11_15380 PF00034 Cytochrome c WU11_15385 PF00920 Dehydratase family WU11_15390 PF01790 Prolipoprotein diacylglyceryl transferase WU11_15425 PF01970 Tripartite tricarboxylate transporter TctA family WU11_15435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU11_15435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU11_15450 PF01923 Cobalamin adenosyltransferase WU11_15460 PF10431 C-terminal, D2-small domain, of ClpB protein WU11_15460 PF07724 AAA domain (Cdc48 subfamily) WU11_15460 PF00004 ATPase family associated with various cellular activities (AAA) WU11_15465 PF00227 Proteasome subunit WU11_15470 PF01258 Prokaryotic dksA/traR C4-type zinc finger WU11_15475 PF07683 Cobalamin synthesis protein cobW C-terminal domain WU11_15475 PF02492 CobW/HypB/UreG, nucleotide-binding domain WU11_15480 PF01475 Ferric uptake regulator family WU11_15490 PF00005 ABC transporter WU11_15495 PF00950 ABC 3 transport family WU11_15500 PF01297 Zinc-uptake complex component A periplasmic WU11_15510 PF03824 High-affinity nickel-transport protein WU11_15515 PF00593 TonB dependent receptor WU11_15515 PF07715 TonB-dependent Receptor Plug Domain WU11_15520 PF02899 Phage integrase, N-terminal SAM-like domain WU11_15520 PF00589 Phage integrase family WU11_15530 PF01678 Diaminopimelate epimerase WU11_15535 PF03279 Bacterial lipid A biosynthesis acyltransferase WU11_15545 PF02773 S-adenosylmethionine synthetase, C-terminal domain WU11_15545 PF00438 S-adenosylmethionine synthetase, N-terminal domain WU11_15545 PF02772 S-adenosylmethionine synthetase, central domain WU11_15555 PF00534 Glycosyl transferases group 1 WU11_15555 PF13439 Glycosyltransferase Family 4 WU11_15560 PF05221 S-adenosyl-L-homocysteine hydrolase WU11_15560 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WU11_15565 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV WU11_15570 PF02219 Methylenetetrahydrofolate reductase WU11_15580 PF03466 LysR substrate binding domain WU11_15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_15585 PF00850 Histone deacetylase domain WU11_15590 PF07690 Major Facilitator Superfamily WU11_15590 PF00083 Sugar (and other) transporter WU11_15600 PF14718 Soluble lytic murein transglycosylase L domain WU11_15600 PF01464 Transglycosylase SLT domain WU11_15605 PF01743 Poly A polymerase head domain WU11_15605 PF12627 Probable RNA and SrmB- binding site of polymerase A WU11_15615 PF00270 DEAD/DEAH box helicase WU11_15615 PF00271 Helicase conserved C-terminal domain WU11_15620 PF03167 Uracil DNA glycosylase superfamily WU11_15630 PF13091 PLD-like domain WU11_15635 PF03459 TOBE domain WU11_15635 PF00005 ABC transporter WU11_15640 PF00528 Binding-protein-dependent transport system inner membrane component WU11_15650 PF00561 alpha/beta hydrolase fold WU11_15705 PF03401 Tripartite tricarboxylate transporter family receptor WU11_15720 PF01266 FAD dependent oxidoreductase WU11_15745 PF17938 Tetracyclin repressor-like, C-terminal domain WU11_15745 PF00440 Bacterial regulatory proteins, tetR family WU11_15760 PF00486 Transcriptional regulatory protein, C terminal WU11_15760 PF00072 Response regulator receiver domain WU11_15770 PF12951 Passenger-associated-transport-repeat WU11_15780 PF13361 UvrD-like helicase C-terminal domain WU11_15780 PF00580 UvrD/REP helicase N-terminal domain WU11_15805 PF13175 AAA ATPase domain WU11_15810 PF01555 DNA methylase WU11_15825 PF00589 Phage integrase family WU11_15825 PF13356 Arm DNA-binding domain WU11_15830 PF01926 50S ribosome-binding GTPase WU11_15830 PF06071 Protein of unknown function (DUF933) WU11_15840 PF01195 Peptidyl-tRNA hydrolase WU11_15845 PF14693 Ribosomal protein TL5, C-terminal domain WU11_15845 PF01386 Ribosomal L25p family WU11_15850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WU11_15850 PF14572 Phosphoribosyl synthetase-associated domain WU11_15860 PF00288 GHMP kinases N terminal domain WU11_15860 PF08544 GHMP kinases C terminal WU11_15865 PF03550 Outer membrane lipoprotein LolB WU11_15875 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WU11_15875 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WU11_15875 PF06827 Zinc finger found in FPG and IleRS WU11_15885 PF01494 FAD binding domain WU11_15895 PF03466 LysR substrate binding domain WU11_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_15900 PF04209 homogentisate 1,2-dioxygenase WU11_15910 PF00884 Sulfatase WU11_15915 PF08521 Two-component sensor kinase N-terminal WU11_15915 PF00512 His Kinase A (phospho-acceptor) domain WU11_15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_15920 PF00072 Response regulator receiver domain WU11_15920 PF00486 Transcriptional regulatory protein, C terminal WU11_15925 PF02913 FAD linked oxidases, C-terminal domain WU11_15925 PF01565 FAD binding domain WU11_15935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WU11_15935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WU11_15935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WU11_15935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WU11_15940 PF00342 Phosphoglucose isomerase WU11_15945 PF13477 Glycosyl transferase 4-like WU11_15945 PF00534 Glycosyl transferases group 1 WU11_15950 PF13439 Glycosyltransferase Family 4 WU11_15950 PF00534 Glycosyl transferases group 1 WU11_15955 PF00534 Glycosyl transferases group 1 WU11_15955 PF13439 Glycosyltransferase Family 4 WU11_15960 PF00733 Asparagine synthase WU11_15960 PF13537 Glutamine amidotransferase domain WU11_15965 PF00534 Glycosyl transferases group 1 WU11_15965 PF13439 Glycosyltransferase Family 4 WU11_15970 PF03023 Lipid II flippase MurJ WU11_15975 PF01370 NAD dependent epimerase/dehydratase family WU11_15980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WU11_15980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WU11_15980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WU11_15985 PF00953 Glycosyl transferase family 4 WU11_15990 PF03232 Ubiquinone biosynthesis protein COQ7 WU11_16000 PF00303 Thymidylate synthase WU11_16005 PF00186 Dihydrofolate reductase WU11_16010 PF00155 Aminotransferase class I and II WU11_16010 PF00392 Bacterial regulatory proteins, gntR family WU11_16015 PF00202 Aminotransferase class-III WU11_16020 PF00171 Aldehyde dehydrogenase family WU11_16025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_16030 PF00528 Binding-protein-dependent transport system inner membrane component WU11_16035 PF00528 Binding-protein-dependent transport system inner membrane component WU11_16045 PF07171 MlrC C-terminus WU11_16045 PF07364 Metallopeptidase family M81 WU11_16055 PF02492 CobW/HypB/UreG, nucleotide-binding domain WU11_16060 PF01730 UreF WU11_16065 PF02814 UreE urease accessory protein, N-terminal domain WU11_16065 PF05194 UreE urease accessory protein, C-terminal domain WU11_16070 PF00449 Urease alpha-subunit, N-terminal domain WU11_16070 PF01979 Amidohydrolase family WU11_16075 PF00699 Urease beta subunit WU11_16080 PF04955 HupE / UreJ protein WU11_16085 PF00547 Urease, gamma subunit WU11_16090 PF01774 UreD urease accessory protein WU11_16115 PF07702 UTRA domain WU11_16115 PF00392 Bacterial regulatory proteins, gntR family WU11_16120 PF05034 Methylaspartate ammonia-lyase N-terminus WU11_16120 PF07476 Methylaspartate ammonia-lyase C-terminus WU11_16125 PF03401 Tripartite tricarboxylate transporter family receptor WU11_16140 PF04293 SpoVR like protein WU11_16145 PF04285 Protein of unknown function (DUF444) WU11_16165 PF02515 CoA-transferase family III WU11_16170 PF14535 AMP-binding enzyme C-terminal domain WU11_16170 PF00501 AMP-binding enzyme WU11_16175 PF00440 Bacterial regulatory proteins, tetR family WU11_16175 PF08361 MAATS-type transcriptional repressor, C-terminal region WU11_16180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_16180 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_16180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_16190 PF02653 Branched-chain amino acid transport system / permease component WU11_16195 PF00005 ABC transporter WU11_16200 PF00005 ABC transporter WU11_16200 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_16210 PF00106 short chain dehydrogenase WU11_16215 PF00378 Enoyl-CoA hydratase/isomerase WU11_16275 PF00075 RNase H WU11_16280 PF08241 Methyltransferase domain WU11_16290 PF01476 LysM domain WU11_16290 PF01464 Transglycosylase SLT domain WU11_16310 PF04391 Protein of unknown function (DUF533) WU11_16315 PF03401 Tripartite tricarboxylate transporter family receptor WU11_16330 PF00072 Response regulator receiver domain WU11_16330 PF00486 Transcriptional regulatory protein, C terminal WU11_16335 PF13493 Domain of unknown function (DUF4118) WU11_16335 PF02702 Osmosensitive K+ channel His kinase sensor domain WU11_16335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_16345 PF01654 Cytochrome bd terminal oxidase subunit I WU11_16350 PF00749 tRNA synthetases class I (E and Q), catalytic domain WU11_16350 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain WU11_16355 PF03775 Septum formation inhibitor MinC, C-terminal domain WU11_16355 PF05209 Septum formation inhibitor MinC, N-terminal domain WU11_16360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WU11_16365 PF03776 Septum formation topological specificity factor MinE WU11_16395 PF00528 Binding-protein-dependent transport system inner membrane component WU11_16400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_16405 PF00535 Glycosyl transferase family 2 WU11_16410 PF03466 LysR substrate binding domain WU11_16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_16420 PF17755 UvrA DNA-binding domain WU11_16420 PF00005 ABC transporter WU11_16420 PF17760 UvrA interaction domain WU11_16425 PF00425 chorismate binding enzyme WU11_16425 PF04715 Anthranilate synthase component I, N terminal region WU11_16430 PF01063 Amino-transferase class IV WU11_16445 PF03401 Tripartite tricarboxylate transporter family receptor WU11_16450 PF00501 AMP-binding enzyme WU11_16450 PF13193 AMP-binding enzyme C-terminal domain WU11_16455 PF07702 UTRA domain WU11_16455 PF00392 Bacterial regulatory proteins, gntR family WU11_16460 PF00899 ThiF family WU11_16465 PF07690 Major Facilitator Superfamily WU11_16475 PF01243 Pyridoxamine 5'-phosphate oxidase WU11_16475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WU11_16480 PF01613 Flavin reductase like domain WU11_16490 PF00551 Formyl transferase WU11_16495 PF03466 LysR substrate binding domain WU11_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_16525 PF00218 Indole-3-glycerol phosphate synthase WU11_16530 PF02885 Glycosyl transferase family, helical bundle domain WU11_16530 PF00591 Glycosyl transferase family, a/b domain WU11_16535 PF00117 Glutamine amidotransferase class-I WU11_16540 PF00425 chorismate binding enzyme WU11_16540 PF04715 Anthranilate synthase component I, N terminal region WU11_16545 PF13419 Haloacid dehalogenase-like hydrolase WU11_16555 PF04379 ApaG domain WU11_16560 PF03562 MltA specific insert domain WU11_16560 PF06725 3D domain WU11_16565 PF01494 FAD binding domain WU11_16570 PF13098 Thioredoxin-like domain WU11_16570 PF10411 Disulfide bond isomerase protein N-terminus WU11_16575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU11_16575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU11_16575 PF01842 ACT domain WU11_16585 PF01171 PP-loop family WU11_16595 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_16595 PF13192 Thioredoxin domain WU11_16600 PF17820 PDZ domain WU11_16600 PF13180 PDZ domain WU11_16605 PF00378 Enoyl-CoA hydratase/isomerase WU11_16630 PF00119 ATP synthase A chain WU11_16635 PF00137 ATP synthase subunit C WU11_16640 PF00430 ATP synthase B/B' CF(0) WU11_16645 PF00213 ATP synthase delta (OSCP) subunit WU11_16650 PF02874 ATP synthase alpha/beta family, beta-barrel domain WU11_16650 PF00306 ATP synthase alpha/beta chain, C terminal domain WU11_16650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU11_16655 PF00231 ATP synthase WU11_16660 PF02874 ATP synthase alpha/beta family, beta-barrel domain WU11_16660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU11_16665 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WU11_16675 PF01208 Uroporphyrinogen decarboxylase (URO-D) WU11_16680 PF18074 Primosomal protein N C-terminal domain WU11_16680 PF00270 DEAD/DEAH box helicase WU11_16680 PF00271 Helicase conserved C-terminal domain WU11_16680 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WU11_16680 PF17764 3′ DNA-binding domain (3′BD) WU11_16685 PF13361 UvrD-like helicase C-terminal domain WU11_16685 PF00580 UvrD/REP helicase N-terminal domain WU11_16695 PF01546 Peptidase family M20/M25/M40 WU11_16695 PF07687 Peptidase dimerisation domain WU11_16705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_16705 PF00005 ABC transporter WU11_16710 PF12911 N-terminal TM domain of oligopeptide transport permease C WU11_16710 PF00528 Binding-protein-dependent transport system inner membrane component WU11_16715 PF00528 Binding-protein-dependent transport system inner membrane component WU11_16735 PF01256 Carbohydrate kinase WU11_16740 PF00378 Enoyl-CoA hydratase/isomerase WU11_16745 PF00378 Enoyl-CoA hydratase/isomerase WU11_16800 PF07732 Multicopper oxidase WU11_16800 PF00394 Multicopper oxidase WU11_16800 PF07731 Multicopper oxidase WU11_16805 PF05275 Copper resistance protein B precursor (CopB) WU11_16810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU11_16810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU11_16810 PF00378 Enoyl-CoA hydratase/isomerase WU11_16825 PF01614 Bacterial transcriptional regulator WU11_16825 PF09339 IclR helix-turn-helix domain WU11_16830 PF05995 Cysteine dioxygenase type I WU11_16835 PF01425 Amidase WU11_16840 PF13458 Periplasmic binding protein WU11_16865 PF13091 PLD-like domain WU11_16870 PF03372 Endonuclease/Exonuclease/phosphatase family WU11_16875 PF02938 GAD domain WU11_16875 PF00152 tRNA synthetases class II (D, K and N) WU11_16875 PF01336 OB-fold nucleic acid binding domain WU11_16905 PF02222 ATP-grasp domain WU11_16905 PF01370 NAD dependent epimerase/dehydratase family WU11_16910 PF00571 CBS domain WU11_16910 PF01380 SIS domain WU11_16930 PF00005 ABC transporter WU11_16935 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WU11_16940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WU11_16945 PF02603 HPr Serine kinase N terminus WU11_16945 PF07475 HPr Serine kinase C-terminal domain WU11_16950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU11_16950 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU11_16950 PF00034 Cytochrome c WU11_16960 PF03668 P-loop ATPase protein family WU11_16965 PF03330 Lytic transglycolase WU11_16965 PF05036 Sporulation related domain WU11_16985 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WU11_16985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU11_16990 PF00111 2Fe-2S iron-sulfur cluster binding domain WU11_16990 PF01799 [2Fe-2S] binding domain WU11_17000 PF09084 NMT1/THI5 like WU11_17005 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17010 PF02441 Flavoprotein WU11_17015 PF00462 Glutaredoxin WU11_17020 PF17827 PrmC N-terminal domain WU11_17020 PF05175 Methyltransferase small domain WU11_17025 PF00472 RF-1 domain WU11_17025 PF03462 PCRF domain WU11_17030 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain WU11_17030 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain WU11_17030 PF01488 Shikimate / quinate 5-dehydrogenase WU11_17050 PF01568 Molydopterin dinucleotide binding domain WU11_17050 PF00384 Molybdopterin oxidoreductase WU11_17065 PF13607 Succinyl-CoA ligase like flavodoxin domain WU11_17065 PF00583 Acetyltransferase (GNAT) family WU11_17065 PF13380 CoA binding domain WU11_17070 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17075 PF12806 Acetyl-CoA dehydrogenase C-terminal like WU11_17075 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_17075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_17075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_17080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU11_17080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU11_17080 PF00378 Enoyl-CoA hydratase/isomerase WU11_17085 PF00108 Thiolase, N-terminal domain WU11_17085 PF02803 Thiolase, C-terminal domain WU11_17090 PF01037 Lrp/AsnC ligand binding domain WU11_17095 PF01380 SIS domain WU11_17100 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family WU11_17105 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17115 PF00378 Enoyl-CoA hydratase/isomerase WU11_17120 PF13380 CoA binding domain WU11_17120 PF00583 Acetyltransferase (GNAT) family WU11_17120 PF13607 Succinyl-CoA ligase like flavodoxin domain WU11_17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_17125 PF03466 LysR substrate binding domain WU11_17130 PF00107 Zinc-binding dehydrogenase WU11_17130 PF08240 Alcohol dehydrogenase GroES-like domain WU11_17140 PF01042 Endoribonuclease L-PSP WU11_17150 PF01546 Peptidase family M20/M25/M40 WU11_17150 PF07687 Peptidase dimerisation domain WU11_17155 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_17160 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_17160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_17165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_17165 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_17165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_17170 PF09330 D-lactate dehydrogenase, membrane binding WU11_17170 PF01565 FAD binding domain WU11_17175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_17175 PF03466 LysR substrate binding domain WU11_17180 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17200 PF00701 Dihydrodipicolinate synthetase family WU11_17205 PF03466 LysR substrate binding domain WU11_17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_17210 PF02515 CoA-transferase family III WU11_17215 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_17220 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_17220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_17225 PF01575 MaoC like domain WU11_17240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WU11_17240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WU11_17245 PF00378 Enoyl-CoA hydratase/isomerase WU11_17250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_17250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_17250 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_17255 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17270 PF00676 Dehydrogenase E1 component WU11_17275 PF02779 Transketolase, pyrimidine binding domain WU11_17275 PF02780 Transketolase, C-terminal domain WU11_17280 PF00378 Enoyl-CoA hydratase/isomerase WU11_17285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WU11_17285 PF00364 Biotin-requiring enzyme WU11_17285 PF02817 e3 binding domain WU11_17290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_17290 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_17290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_17295 PF13193 AMP-binding enzyme C-terminal domain WU11_17295 PF00501 AMP-binding enzyme WU11_17305 PF13458 Periplasmic binding protein WU11_17310 PF02653 Branched-chain amino acid transport system / permease component WU11_17315 PF00005 ABC transporter WU11_17315 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU11_17320 PF00005 ABC transporter WU11_17325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU11_17325 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_17340 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17355 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17365 PF00899 ThiF family WU11_17370 PF03572 Peptidase family S41 WU11_17370 PF13180 PDZ domain WU11_17375 PF01551 Peptidase family M23 WU11_17380 PF00300 Histidine phosphatase superfamily (branch 1) WU11_17390 PF00462 Glutaredoxin WU11_17395 PF02556 Preprotein translocase subunit SecB WU11_17400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WU11_17400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WU11_17405 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17410 PF00588 SpoU rRNA Methylase family WU11_17420 PF08241 Methyltransferase domain WU11_17425 PF04107 Glutamate-cysteine ligase family 2(GCS2) WU11_17430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU11_17440 PF00528 Binding-protein-dependent transport system inner membrane component WU11_17445 PF00005 ABC transporter WU11_17455 PF00111 2Fe-2S iron-sulfur cluster binding domain WU11_17455 PF01799 [2Fe-2S] binding domain WU11_17460 PF00941 FAD binding domain in molybdopterin dehydrogenase WU11_17460 PF03450 CO dehydrogenase flavoprotein C-terminal domain WU11_17465 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WU11_17465 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU11_17470 PF03480 Bacterial extracellular solute-binding protein, family 7 WU11_17475 PF00355 Rieske [2Fe-2S] domain WU11_17480 PF14759 Reductase C-terminal WU11_17480 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_17485 PF00355 Rieske [2Fe-2S] domain WU11_17485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) WU11_17495 PF00857 Isochorismatase family WU11_17510 PF17645 Arylmalonate decarboxylase WU11_17520 PF12804 MobA-like NTP transferase domain WU11_17530 PF01047 MarR family WU11_17535 PF02386 Cation transport protein WU11_17540 PF02080 TrkA-C domain WU11_17540 PF02254 TrkA-N domain WU11_17545 PF02954 Bacterial regulatory protein, Fis family WU11_17545 PF00072 Response regulator receiver domain WU11_17545 PF00158 Sigma-54 interaction domain WU11_17550 PF00989 PAS fold WU11_17550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_17550 PF00672 HAMP domain WU11_17550 PF00512 His Kinase A (phospho-acceptor) domain WU11_17560 PF01029 NusB family WU11_17560 PF01189 16S rRNA methyltransferase RsmB/F WU11_17570 PF03447 Homoserine dehydrogenase, NAD binding domain WU11_17570 PF01958 Domain of unknown function DUF108 WU11_17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_17595 PF03466 LysR substrate binding domain WU11_17605 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17615 PF00155 Aminotransferase class I and II WU11_17620 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_17630 PF00682 HMGL-like WU11_17635 PF02481 DNA recombination-mediator protein A WU11_17635 PF17782 DprA winged helix domain WU11_17640 PF01037 Lrp/AsnC ligand binding domain WU11_17645 PF00266 Aminotransferase class-V WU11_17650 PF01327 Polypeptide deformylase WU11_17660 PF00551 Formyl transferase WU11_17660 PF02911 Formyl transferase, C-terminal domain WU11_17670 PF13419 Haloacid dehalogenase-like hydrolase WU11_17680 PF03641 Possible lysine decarboxylase WU11_17690 PF00919 Uncharacterized protein family UPF0004 WU11_17690 PF18693 TRAM domain WU11_17690 PF04055 Radical SAM superfamily WU11_17695 PF01361 Tautomerase enzyme WU11_17700 PF01266 FAD dependent oxidoreductase WU11_17705 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17710 PF07729 FCD domain WU11_17710 PF00392 Bacterial regulatory proteins, gntR family WU11_17720 PF00202 Aminotransferase class-III WU11_17725 PF00491 Arginase family WU11_17735 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17740 PF02627 Carboxymuconolactone decarboxylase family WU11_17745 PF00378 Enoyl-CoA hydratase/isomerase WU11_17750 PF01614 Bacterial transcriptional regulator WU11_17750 PF09339 IclR helix-turn-helix domain WU11_17755 PF00501 AMP-binding enzyme WU11_17755 PF13193 AMP-binding enzyme C-terminal domain WU11_17760 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17770 PF12951 Passenger-associated-transport-repeat WU11_17770 PF12951 Passenger-associated-transport-repeat WU11_17800 PF14031 Putative serine dehydratase domain WU11_17800 PF01168 Alanine racemase, N-terminal domain WU11_17805 PF07411 Domain of unknown function (DUF1508) WU11_17810 PF01145 SPFH domain / Band 7 family WU11_17820 PF01042 Endoribonuclease L-PSP WU11_17865 PF03837 RecT family WU11_17900 PF00589 Phage integrase family WU11_17920 PF03466 LysR substrate binding domain WU11_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_17935 PF02096 60Kd inner membrane protein WU11_17935 PF14849 YidC periplasmic domain WU11_17940 PF01809 Putative membrane protein insertion efficiency factor WU11_17945 PF00825 Ribonuclease P WU11_17950 PF00468 Ribosomal protein L34 WU11_17955 PF00308 Bacterial dnaA protein WU11_17955 PF11638 DnaA N-terminal domain WU11_17955 PF08299 Bacterial dnaA protein helix-turn-helix WU11_17960 PF02768 DNA polymerase III beta subunit, C-terminal domain WU11_17960 PF00712 DNA polymerase III beta subunit, N-terminal domain WU11_17960 PF02767 DNA polymerase III beta subunit, central domain WU11_17965 PF00986 DNA gyrase B subunit, carboxyl terminus WU11_17965 PF00204 DNA gyrase B WU11_17965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_17965 PF01751 Toprim domain WU11_17965 PF18053 DNA gyrase B subunit insert domain WU11_17970 PF09339 IclR helix-turn-helix domain WU11_17970 PF01614 Bacterial transcriptional regulator WU11_17975 PF01425 Amidase WU11_17980 PF03401 Tripartite tricarboxylate transporter family receptor WU11_17990 PF01070 FMN-dependent dehydrogenase WU11_18010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU11_18010 PF02770 Acyl-CoA dehydrogenase, middle domain WU11_18010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU11_18015 PF00376 MerR family regulatory protein WU11_18015 PF09278 MerR, DNA binding WU11_18040 PF00108 Thiolase, N-terminal domain WU11_18040 PF02803 Thiolase, C-terminal domain WU11_18045 PF01039 Carboxyl transferase domain WU11_18050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU11_18050 PF00289 Biotin carboxylase, N-terminal domain WU11_18050 PF02785 Biotin carboxylase C-terminal domain WU11_18050 PF00364 Biotin-requiring enzyme WU11_18060 PF00202 Aminotransferase class-III WU11_18065 PF03401 Tripartite tricarboxylate transporter family receptor WU11_18070 PF14031 Putative serine dehydratase domain WU11_18070 PF01168 Alanine racemase, N-terminal domain WU11_18075 PF16868 NMT1-like family WU11_18085 PF07715 TonB-dependent Receptor Plug Domain WU11_18085 PF00593 TonB dependent receptor WU11_18090 PF04361 Protein of unknown function (DUF494) WU11_18105 PF01131 DNA topoisomerase WU11_18105 PF01751 Toprim domain WU11_18115 PF00005 ABC transporter WU11_18120 PF00528 Binding-protein-dependent transport system inner membrane component WU11_18130 PF00171 Aldehyde dehydrogenase family WU11_18140 PF00205 Thiamine pyrophosphate enzyme, central domain WU11_18140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU11_18140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU11_18145 PF01037 Lrp/AsnC ligand binding domain WU11_18150 PF01062 Bestrophin, RFP-TM, chloride channel WU11_18160 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WU11_18175 PF02607 B12 binding domain WU11_18175 PF02965 Vitamin B12 dependent methionine synthase, activation domain WU11_18175 PF02574 Homocysteine S-methyltransferase WU11_18175 PF02310 B12 binding domain WU11_18175 PF00809 Pterin binding enzyme WU11_18180 PF07715 TonB-dependent Receptor Plug Domain WU11_18180 PF00593 TonB dependent receptor WU11_18185 PF01497 Periplasmic binding protein WU11_18190 PF05690 Thiazole biosynthesis protein ThiG WU11_18195 PF08543 Phosphomethylpyrimidine kinase WU11_18210 PF02321 Outer membrane efflux protein WU11_18215 PF01467 Cytidylyltransferase-like WU11_18225 PF01594 AI-2E family transporter WU11_18235 PF02254 TrkA-N domain WU11_18235 PF07885 Ion channel WU11_18245 PF00164 Ribosomal protein S12/S23 WU11_18250 PF00177 Ribosomal protein S7p/S5e WU11_18255 PF03764 Elongation factor G, domain IV WU11_18255 PF00009 Elongation factor Tu GTP binding domain WU11_18255 PF00679 Elongation factor G C-terminus WU11_18255 PF03144 Elongation factor Tu domain 2 WU11_18255 PF14492 Elongation Factor G, domain II WU11_18260 PF00009 Elongation factor Tu GTP binding domain WU11_18260 PF03143 Elongation factor Tu C-terminal domain WU11_18260 PF03144 Elongation factor Tu domain 2 WU11_18265 PF00338 Ribosomal protein S10p/S20e WU11_18270 PF00297 Ribosomal protein L3 WU11_18275 PF00573 Ribosomal protein L4/L1 family WU11_18280 PF00276 Ribosomal protein L23 WU11_18285 PF00181 Ribosomal Proteins L2, RNA binding domain WU11_18285 PF03947 Ribosomal Proteins L2, C-terminal domain WU11_18290 PF00203 Ribosomal protein S19 WU11_18295 PF00237 Ribosomal protein L22p/L17e WU11_18300 PF00189 Ribosomal protein S3, C-terminal domain WU11_18300 PF07650 KH domain WU11_18305 PF00252 Ribosomal protein L16p/L10e WU11_18310 PF00831 Ribosomal L29 protein WU11_18315 PF00366 Ribosomal protein S17 WU11_18325 PF00171 Aldehyde dehydrogenase family WU11_18335 PF00238 Ribosomal protein L14p/L23e WU11_18340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WU11_18345 PF00281 Ribosomal protein L5 WU11_18345 PF00673 ribosomal L5P family C-terminus WU11_18350 PF00253 Ribosomal protein S14p/S29e WU11_18355 PF00410 Ribosomal protein S8 WU11_18360 PF00347 Ribosomal protein L6 WU11_18365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WU11_18370 PF00333 Ribosomal protein S5, N-terminal domain WU11_18370 PF03719 Ribosomal protein S5, C-terminal domain WU11_18375 PF00327 Ribosomal protein L30p/L7e WU11_18380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WU11_18385 PF00344 SecY translocase WU11_18390 PF01176 Translation initiation factor 1A / IF-1 WU11_18395 PF00444 Ribosomal protein L36 WU11_18400 PF00416 Ribosomal protein S13/S18 WU11_18405 PF00411 Ribosomal protein S11 WU11_18410 PF00163 Ribosomal protein S4/S9 N-terminal domain WU11_18410 PF01479 S4 domain WU11_18415 PF01000 RNA polymerase Rpb3/RpoA insert domain WU11_18415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WU11_18415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WU11_18420 PF01196 Ribosomal protein L17 WU11_18430 PF03091 CutA1 divalent ion tolerance protein WU11_18435 PF02683 Cytochrome C biogenesis protein transmembrane region WU11_18435 PF11412 Disulphide bond corrector protein DsbC WU11_18440 PF00892 EamA-like transporter family WU11_18445 PF00490 Delta-aminolevulinic acid dehydratase WU11_18450 PF01926 50S ribosome-binding GTPase WU11_18455 PF00034 Cytochrome c WU11_18460 PF05140 ResB-like family WU11_18465 PF01578 Cytochrome C assembly protein WU11_18470 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WU11_18470 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WU11_18475 PF01491 Frataxin-like domain WU11_18480 PF00912 Transglycosylase WU11_18480 PF17092 Penicillin-binding protein OB-like domain WU11_18480 PF00905 Penicillin binding protein transpeptidase domain WU11_18485 PF01202 Shikimate kinase WU11_18490 PF01761 3-dehydroquinate synthase WU11_18495 PF01966 HD domain WU11_18495 PF13286 Phosphohydrolase-associated domain WU11_18500 PF13417 Glutathione S-transferase, N-terminal domain WU11_18500 PF00043 Glutathione S-transferase, C-terminal domain WU11_18505 PF17755 UvrA DNA-binding domain WU11_18505 PF17760 UvrA interaction domain WU11_18510 PF07690 Major Facilitator Superfamily WU11_18515 PF00436 Single-strand binding protein family WU11_18520 PF00593 TonB dependent receptor WU11_18520 PF07715 TonB-dependent Receptor Plug Domain WU11_18530 PF03328 HpcH/HpaI aldolase/citrate lyase family WU11_18540 PF03401 Tripartite tricarboxylate transporter family receptor WU11_18550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_18550 PF03466 LysR substrate binding domain WU11_18560 PF03401 Tripartite tricarboxylate transporter family receptor WU11_18565 PF00534 Glycosyl transferases group 1 WU11_18565 PF13439 Glycosyltransferase Family 4 WU11_18575 PF03466 LysR substrate binding domain WU11_18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_18585 PF00528 Binding-protein-dependent transport system inner membrane component WU11_18590 PF00005 ABC transporter WU11_18610 PF01274 Malate synthase WU11_18630 PF01040 UbiA prenyltransferase family WU11_18635 PF00155 Aminotransferase class I and II WU11_18640 PF13185 GAF domain WU11_18645 PF00701 Dihydrodipicolinate synthetase family WU11_18655 PF01476 LysM domain WU11_18655 PF04972 BON domain WU11_18660 PF05690 Thiazole biosynthesis protein ThiG WU11_18660 PF02597 ThiS family WU11_18665 PF00561 alpha/beta hydrolase fold WU11_18670 PF02390 Putative methyltransferase WU11_18685 PF00682 HMGL-like WU11_18690 PF03401 Tripartite tricarboxylate transporter family receptor WU11_18705 PF07702 UTRA domain WU11_18705 PF00392 Bacterial regulatory proteins, gntR family WU11_18710 PF03401 Tripartite tricarboxylate transporter family receptor WU11_18720 PF07702 UTRA domain WU11_18720 PF00392 Bacterial regulatory proteins, gntR family WU11_18725 PF00528 Binding-protein-dependent transport system inner membrane component WU11_18735 PF00005 ABC transporter WU11_18740 PF00378 Enoyl-CoA hydratase/isomerase WU11_18745 PF03401 Tripartite tricarboxylate transporter family receptor WU11_18750 PF02801 Beta-ketoacyl synthase, C-terminal domain WU11_18750 PF00550 Phosphopantetheine attachment site WU11_18750 PF08659 KR domain WU11_18750 PF00698 Acyl transferase domain WU11_18750 PF08240 Alcohol dehydrogenase GroES-like domain WU11_18750 PF08990 Erythronolide synthase docking WU11_18750 PF16197 Ketoacyl-synthetase C-terminal extension WU11_18750 PF00109 Beta-ketoacyl synthase, N-terminal domain WU11_18750 PF14765 Polyketide synthase dehydratase WU11_18755 PF02515 CoA-transferase family III WU11_18760 PF00440 Bacterial regulatory proteins, tetR family WU11_18765 PF09297 NADH pyrophosphatase zinc ribbon domain WU11_18765 PF00293 NUDIX domain WU11_18770 PF00970 Oxidoreductase FAD-binding domain WU11_18770 PF00175 Oxidoreductase NAD-binding domain WU11_18770 PF00111 2Fe-2S iron-sulfur cluster binding domain WU11_18775 PF01425 Amidase WU11_18785 PF03466 LysR substrate binding domain WU11_18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU11_18790 PF13458 Periplasmic binding protein WU11_18800 PF00005 ABC transporter WU11_18815 PF02653 Branched-chain amino acid transport system / permease component WU11_18840 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WU11_18840 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WU11_18855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WU11_18855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WU11_18855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WU11_18860 PF07690 Major Facilitator Superfamily WU11_18865 PF12804 MobA-like NTP transferase domain WU11_18865 PF14602 Hexapeptide repeat of succinyl-transferase WU11_18865 PF00132 Bacterial transferase hexapeptide (six repeats) WU11_18885 PF02630 SCO1/SenC WU11_18890 PF01040 UbiA prenyltransferase family WU11_18895 PF02628 Cytochrome oxidase assembly protein WU11_18915 PF00510 Cytochrome c oxidase subunit III WU11_18930 PF00115 Cytochrome C and Quinol oxidase polypeptide I WU11_18935 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WU11_18935 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WU11_18945 PF00999 Sodium/hydrogen exchanger family WU11_18950 PF00149 Calcineurin-like phosphoesterase WU11_18955 PF00140 Sigma-70 factor, region 1.2 WU11_18955 PF04542 Sigma-70 region 2 WU11_18955 PF04545 Sigma-70, region 4 WU11_18965 PF00756 Putative esterase WU11_18970 PF00107 Zinc-binding dehydrogenase WU11_18970 PF08240 Alcohol dehydrogenase GroES-like domain WU11_18980 PF04898 Glutamate synthase central domain WU11_18980 PF01645 Conserved region in glutamate synthase WU11_18980 PF01493 GXGXG motif WU11_18980 PF00310 Glutamine amidotransferases class-II WU11_18985 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU11_18985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WU11_18990 PF03922 OmpW family WU11_18995 PF03401 Tripartite tricarboxylate transporter family receptor WU11_19000 PF00005 ABC transporter WU11_19005 PF02405 Permease MlaE WU11_19010 PF02470 MlaD protein WU11_19015 PF04333 MlaA lipoprotein WU11_19030 PF01061 ABC-2 type transporter WU11_19040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WU11_19045 PF01634 ATP phosphoribosyltransferase WU11_19050 PF00815 Histidinol dehydrogenase WU11_19055 PF00155 Aminotransferase class I and II WU11_19060 PF00475 Imidazoleglycerol-phosphate dehydratase WU11_19065 PF00117 Glutamine amidotransferase class-I WU11_19070 PF00977 Histidine biosynthesis protein WU11_19075 PF00977 Histidine biosynthesis protein WU11_19080 PF01502 Phosphoribosyl-AMP cyclohydrolase WU11_19085 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase WU11_19090 PF01230 HIT domain WU11_19095 PF02416 mttA/Hcf106 family WU11_19100 PF02416 mttA/Hcf106 family WU11_19105 PF00902 Sec-independent protein translocase protein (TatC) WU11_19115 PF03401 Tripartite tricarboxylate transporter family receptor WU11_19120 PF02917 Pertussis toxin, subunit 1 WU11_19125 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain WU11_19125 PF03440 Aerolysin/Pertussis toxin (APT) domain WU11_19130 PF09275 Pertussis toxin S4 subunit WU11_19135 PF09276 Pertussis toxin S5 subunit WU11_19140 PF03440 Aerolysin/Pertussis toxin (APT) domain WU11_19140 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain WU11_19145 PF04956 TrbC/VIRB2 family WU11_19150 PF05101 Type IV secretory pathway, VirB3-like protein WU11_19155 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WU11_19160 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WU11_19170 PF04335 VirB8 protein WU11_19175 PF03524 Conjugal transfer protein WU11_19180 PF03743 Bacterial conjugation TrbI-like protein WU11_19185 PF00437 Type II/IV secretion system protein WU11_19195 PF00892 EamA-like transporter family WU11_19215 PF12631 MnmE helical domain WU11_19215 PF10396 GTP-binding protein TrmE N-terminus WU11_19215 PF01926 50S ribosome-binding GTPase WU11_19220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_19230 PF00528 Binding-protein-dependent transport system inner membrane component WU11_19230 PF12911 N-terminal TM domain of oligopeptide transport permease C WU11_19235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_19235 PF00005 ABC transporter WU11_19245 PF01960 ArgJ family WU11_19255 PF00293 NUDIX domain WU11_19275 PF02321 Outer membrane efflux protein WU11_19280 PF00873 AcrB/AcrD/AcrF family WU11_19285 PF00873 AcrB/AcrD/AcrF family WU11_19290 PF13533 Biotin-lipoyl like WU11_19295 PF07072 Cell division protein WU11_19300 PF01121 Dephospho-CoA kinase WU11_19305 PF01478 Type IV leader peptidase family WU11_19305 PF06750 Bacterial Peptidase A24 N-terminal domain WU11_19320 PF02569 Pantoate-beta-alanine ligase WU11_19325 PF02616 Segregation and condensation protein ScpA WU11_19335 PF07690 Major Facilitator Superfamily WU11_19340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WU11_19340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WU11_19350 PF03401 Tripartite tricarboxylate transporter family receptor WU11_19355 PF00005 ABC transporter WU11_19360 PF00528 Binding-protein-dependent transport system inner membrane component WU11_19365 PF00528 Binding-protein-dependent transport system inner membrane component WU11_19370 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU11_19375 PF00005 ABC transporter WU11_19380 PF18075 FtsX extracellular domain WU11_19385 PF03975 CheD chemotactic sensory transduction WU11_19395 PF10576 Iron-sulfur binding domain of endonuclease III WU11_19395 PF00633 Helix-hairpin-helix motif WU11_19395 PF00730 HhH-GPD superfamily base excision DNA repair protein WU11_19395 PF14815 NUDIX domain WU11_19405 PF08241 Methyltransferase domain WU11_19415 PF02515 CoA-transferase family III WU11_19420 PF02515 CoA-transferase family III WU11_19430 PF03401 Tripartite tricarboxylate transporter family receptor WU11_19435 PF00378 Enoyl-CoA hydratase/isomerase WU11_19450 PF00682 HMGL-like WU11_19455 PF00378 Enoyl-CoA hydratase/isomerase WU11_19460 PF02515 CoA-transferase family III WU11_19475 PF00199 Catalase WU11_19475 PF06628 Catalase-related immune-responsive WU11_19480 PF00528 Binding-protein-dependent transport system inner membrane component WU11_19485 PF00005 ABC transporter WU11_19495 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WU11_19500 PF07687 Peptidase dimerisation domain WU11_19500 PF01546 Peptidase family M20/M25/M40 WU11_19505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_19505 PF00005 ABC transporter WU11_19510 PF00005 ABC transporter WU11_19510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU11_19515 PF00528 Binding-protein-dependent transport system inner membrane component WU11_19515 PF12911 N-terminal TM domain of oligopeptide transport permease C WU11_19520 PF00528 Binding-protein-dependent transport system inner membrane component WU11_19525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU11_19530 PF01926 50S ribosome-binding GTPase WU11_19530 PF12631 MnmE helical domain WU11_19530 PF10396 GTP-binding protein TrmE N-terminus WU11_19540 PF00486 Transcriptional regulatory protein, C terminal WU11_19540 PF00072 Response regulator receiver domain WU11_19545 PF00512 His Kinase A (phospho-acceptor) domain WU11_19545 PF00672 HAMP domain WU11_19545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU11_19560 PF01970 Tripartite tricarboxylate transporter TctA family WU11_19565 PF00155 Aminotransferase class I and II WU11_19570 PF00313 'Cold-shock' DNA-binding domain