WU35_00005	SM01228	WU35_00005
WU35_00025	SM00470	ParB-like nuclease domain
WU35_00030	SM00870	WU35_00030
WU35_00070	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
WU35_00070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
WU35_00075	SM00649	Ribosomal protein L11/L12
WU35_00100	SM00663	RNA polymerase I subunit A N-terminus
WU35_00130	SM00448	cheY-homologous receiver domain
WU35_00130	SM00862	Transcriptional regulatory protein, C terminal
WU35_00200	SM00563	Phosphate acyltransferases
WU35_00240	SM00421	helix_turn_helix, Lux Regulon
WU35_00285	SM00382	ATPases associated with a variety of cellular activities
WU35_00300	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_00380	SM00387	Histidine kinase-like ATPases
WU35_00390	SM00644	WU35_00390
WU35_00405	SM00382	ATPases associated with a variety of cellular activities
WU35_00405	SM00962	SRP54-type protein, GTPase domain
WU35_00405	SM00963	SRP54-type protein, helical bundle domain
WU35_00505	SM00382	ATPases associated with a variety of cellular activities
WU35_00530	SM00936	Penicillin-binding protein 5, C-terminal domain 
WU35_00550	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU35_00595	SM00836	DALR anticodon binding domain
WU35_00595	SM01016	Arginyl tRNA synthetase N terminal dom
WU35_00630	SM00382	ATPases associated with a variety of cellular activities
WU35_00645	SM00382	ATPases associated with a variety of cellular activities
WU35_00680	SM00917	LeuA allosteric (dimerisation) domain
WU35_00735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_00735	SM00895	WU35_00735
WU35_00770	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_00780	SM00797	Allophanate hydrolase subunit 2
WU35_00785	SM00796	Allophanate hydrolase subunit 1
WU35_00810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_00810	SM00387	Histidine kinase-like ATPases
WU35_00810	SM00388	His Kinase A (phosphoacceptor) domain
WU35_00815	SM00448	cheY-homologous receiver domain
WU35_00815	SM00862	Transcriptional regulatory protein, C terminal
WU35_00820	SM00091	PAS domain
WU35_00820	SM00387	Histidine kinase-like ATPases
WU35_00820	SM00388	His Kinase A (phosphoacceptor) domain
WU35_00825	SM00448	cheY-homologous receiver domain
WU35_00825	SM00862	Transcriptional regulatory protein, C terminal
WU35_00835	SM00978	WU35_00835
WU35_00880	SM00487	DEAD-like helicases superfamily
WU35_00880	SM00490	helicase superfamily c-terminal domain
WU35_00925	SM00450	Rhodanese Homology Domain
WU35_01020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_01020	SM00895	WU35_01020
WU35_01070	SM00882	Coenzyme A transferase
WU35_01075	SM00882	Coenzyme A transferase
WU35_01080	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_01100	SM00869	Autotransporter beta-domain
WU35_01130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_01130	SM00895	WU35_01130
WU35_01195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_01195	SM00895	WU35_01195
WU35_01235	SM00382	ATPases associated with a variety of cellular activities
WU35_01250	SM00853	MutL C terminal dimerisation domain
WU35_01250	SM01340	WU35_01250
WU35_01260	SM00646	WU35_01260
WU35_01340	SM00382	ATPases associated with a variety of cellular activities
WU35_01345	SM00382	ATPases associated with a variety of cellular activities
WU35_01425	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU35_01455	SM00342	helix_turn_helix, arabinose operon control protein
WU35_01465	SM00342	helix_turn_helix, arabinose operon control protein
WU35_01515	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU35_01540	SM00382	ATPases associated with a variety of cellular activities
WU35_01545	SM00382	ATPases associated with a variety of cellular activities
WU35_01615	SM00732	Likely ribonuclease with RNase H fold.
WU35_01630	SM00563	Phosphate acyltransferases
WU35_01680	SM00849	Metallo-beta-lactamase superfamily
WU35_01705	SM00267	diguanylate cyclase
WU35_01730	SM00382	ATPases associated with a variety of cellular activities
WU35_01750	SM00965	Secretin and TonB N terminus short domain
WU35_01795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_01795	SM00895	WU35_01795
WU35_01810	SM01236	WU35_01810
WU35_01830	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_01855	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
WU35_01870	SM00845	GatB domain
WU35_01945	SM00749	bacterial OsmY and nodulation domain
WU35_02015	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_02055	SM00450	Rhodanese Homology Domain
WU35_02150	SM00479	WU35_02150
WU35_02180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_02255	SM00357	Cold shock protein domain
WU35_02265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_02265	SM00895	WU35_02265
WU35_02280	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
WU35_02350	SM00363	S4 RNA-binding domain
WU35_02355	SM00316	Ribosomal protein S1-like RNA-binding domain
WU35_02395	SM00954	Region found in RelA / SpoT proteins
WU35_02440	SM00478	endonuclease III
WU35_02440	SM00525	WU35_02440
WU35_02445	SM00382	ATPases associated with a variety of cellular activities
WU35_02450	SM00382	ATPases associated with a variety of cellular activities
WU35_02480	SM00382	ATPases associated with a variety of cellular activities
WU35_02505	SM00382	ATPases associated with a variety of cellular activities
WU35_02530	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WU35_02530	SM00292	breast cancer carboxy-terminal domain
WU35_02530	SM00532	Ligase N family
WU35_02535	SM00771	ZipA, C-terminal domain (FtsZ-binding)
WU35_02540	SM00968	SMC proteins Flexible Hinge Domain
WU35_02550	SM00986	Uracil DNA glycosylase superfamily
WU35_02550	SM00987	UreE urease accessory protein, C-terminal domain 
WU35_02560	SM00448	cheY-homologous receiver domain
WU35_02560	SM00862	Transcriptional regulatory protein, C terminal
WU35_02570	SM00387	Histidine kinase-like ATPases
WU35_02570	SM00388	His Kinase A (phosphoacceptor) domain
WU35_02585	SM00342	helix_turn_helix, arabinose operon control protein
WU35_02600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_02600	SM00895	WU35_02600
WU35_02605	SM01130	WU35_02605
WU35_02660	SM00387	Histidine kinase-like ATPases
WU35_02660	SM00388	His Kinase A (phosphoacceptor) domain
WU35_02665	SM00448	cheY-homologous receiver domain
WU35_02665	SM00862	Transcriptional regulatory protein, C terminal
WU35_02690	SM00411	bacterial (prokaryotic) histone like domain
WU35_02695	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
WU35_02705	SM00967	RNA 2'-O ribose methyltransferase substrate binding
WU35_02710	SM00316	Ribosomal protein S1-like RNA-binding domain
WU35_02710	SM00357	Cold shock protein domain
WU35_02710	SM00955	WU35_02710
WU35_02720	SM01144	WU35_02720
WU35_02755	SM00155	Phospholipase D. Active site motifs.
WU35_02800	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU35_02805	SM00267	diguanylate cyclase
WU35_02855	SM00883	Chaperonin 10 Kd subunit
WU35_02865	SM00869	Autotransporter beta-domain
WU35_02885	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
WU35_02925	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_02965	SM00880	WU35_02965
WU35_02970	SM00382	ATPases associated with a variety of cellular activities
WU35_02970	SM00962	SRP54-type protein, GTPase domain
WU35_02970	SM00963	SRP54-type protein, helical bundle domain
WU35_03005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU35_03035	SM00382	ATPases associated with a variety of cellular activities
WU35_03055	SM00919	Malic enzyme, NAD binding domain
WU35_03055	SM01274	WU35_03055
WU35_03075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_03075	SM00895	WU35_03075
WU35_03150	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_03155	SM00852	Probable molybdopterin binding domain
WU35_03175	SM00487	DEAD-like helicases superfamily
WU35_03175	SM00490	helicase superfamily c-terminal domain
WU35_03250	SM01011	Aminopeptidase P, N-terminal domain
WU35_03275	SM00798	AICARFT/IMPCHase bienzyme
WU35_03275	SM00851	MGS-like domain
WU35_03285	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WU35_03300	SM00382	ATPases associated with a variety of cellular activities
WU35_03305	SM00341	Helicase and RNase D C-terminal
WU35_03305	SM00487	DEAD-like helicases superfamily
WU35_03305	SM00490	helicase superfamily c-terminal domain
WU35_03305	SM00956	WU35_03305
WU35_03320	SM00947	Carbonic anhydrase
WU35_03345	SM00382	ATPases associated with a variety of cellular activities
WU35_03350	SM00382	ATPases associated with a variety of cellular activities
WU35_03580	SM00448	cheY-homologous receiver domain
WU35_03580	SM00862	Transcriptional regulatory protein, C terminal
WU35_03635	SM00382	ATPases associated with a variety of cellular activities
WU35_03680	SM00650	Ribosomal RNA adenine dimethylases
WU35_03745	SM00382	ATPases associated with a variety of cellular activities
WU35_03765	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_03800	SM00867	YceI-like domain 
WU35_03805	SM00965	Secretin and TonB N terminus short domain
WU35_03840	SM00530	Helix-turn-helix XRE-family like proteins 
WU35_03845	SM00862	Transcriptional regulatory protein, C terminal
WU35_03850	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
WU35_03930	SM00382	ATPases associated with a variety of cellular activities
WU35_03950	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_03965	SM00382	ATPases associated with a variety of cellular activities
WU35_03995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_03995	SM00895	WU35_03995
WU35_04000	SM00869	Autotransporter beta-domain
WU35_04005	SM00895	WU35_04005
WU35_04010	SM00829	Enoylreductase
WU35_04030	SM00382	ATPases associated with a variety of cellular activities
WU35_04090	SM00487	DEAD-like helicases superfamily
WU35_04090	SM00490	helicase superfamily c-terminal domain
WU35_04090	SM00982	WU35_04090
WU35_04090	SM01058	CarD-like/TRCF domain
WU35_04175	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
WU35_04180	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
WU35_04235	SM00014	Acid phosphatase homologues
WU35_04295	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_04320	SM00450	Rhodanese Homology Domain
WU35_04385	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_04410	SM00829	Enoylreductase
WU35_04440	SM00316	Ribosomal protein S1-like RNA-binding domain
WU35_04440	SM00322	K homology RNA-binding domain
WU35_04445	SM01387	WU35_04445
WU35_04485	SM00382	ATPases associated with a variety of cellular activities
WU35_04560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_04560	SM00866	WU35_04560
WU35_04565	SM00878	Biotin carboxylase C-terminal domain
WU35_04615	SM00382	ATPases associated with a variety of cellular activities
WU35_04715	SM00434	DNA Topoisomerase IV
WU35_04725	SM00830	Chorismate mutase type II
WU35_04745	SM00316	Ribosomal protein S1-like RNA-binding domain
WU35_04750	SM00411	bacterial (prokaryotic) histone like domain
WU35_04800	SM00893	Electron transfer flavoprotein domain
WU35_04805	SM00893	Electron transfer flavoprotein domain
WU35_04840	SM00382	ATPases associated with a variety of cellular activities
WU35_04860	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU35_04910	SM00363	S4 RNA-binding domain
WU35_04955	SM00421	helix_turn_helix, Lux Regulon
WU35_04955	SM00448	cheY-homologous receiver domain
WU35_04960	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
WU35_04960	SM00091	PAS domain
WU35_04960	SM00387	Histidine kinase-like ATPases
WU35_04960	SM00388	His Kinase A (phosphoacceptor) domain
WU35_04995	SM00861	Transketolase, pyrimidine binding domain
WU35_05000	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
WU35_05050	SM00271	DnaJ molecular chaperone homology domain
WU35_05070	SM00852	Probable molybdopterin binding domain
WU35_05090	SM00316	Ribosomal protein S1-like RNA-binding domain
WU35_05125	SM00448	cheY-homologous receiver domain
WU35_05130	SM00073	Histidine Phosphotransfer domain
WU35_05130	SM00260	Two component signalling adaptor domain
WU35_05130	SM00387	Histidine kinase-like ATPases
WU35_05130	SM01231	WU35_05130
WU35_05135	SM00260	Two component signalling adaptor domain
WU35_05140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU35_05140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_05150	SM00448	cheY-homologous receiver domain
WU35_05155	SM00448	cheY-homologous receiver domain
WU35_05195	SM01091	Transporter associated domain
WU35_05210	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU35_05235	SM01323	WU35_05235
WU35_05325	SM00919	Malic enzyme, NAD binding domain
WU35_05325	SM01274	WU35_05325
WU35_05350	SM00382	ATPases associated with a variety of cellular activities
WU35_05395	SM00382	ATPases associated with a variety of cellular activities
WU35_05405	SM01103	WU35_05405
WU35_05440	SM00116	Domain in cystathionine beta-synthase and other proteins.
WU35_05460	SM00448	cheY-homologous receiver domain
WU35_05460	SM00862	Transcriptional regulatory protein, C terminal
WU35_05465	SM00052	Putative diguanylate phosphodiesterase
WU35_05465	SM00267	diguanylate cyclase
WU35_05465	SM00387	Histidine kinase-like ATPases
WU35_05465	SM00388	His Kinase A (phosphoacceptor) domain
WU35_05475	SM00382	ATPases associated with a variety of cellular activities
WU35_05495	SM00382	ATPases associated with a variety of cellular activities
WU35_05520	SM00822	WU35_05520
WU35_05525	SM00937	WU35_05525
WU35_05545	SM00382	ATPases associated with a variety of cellular activities
WU35_05555	SM00869	Autotransporter beta-domain
WU35_05585	SM00481	DNA polymerase alpha chain like domain
WU35_05605	SM00919	Malic enzyme, NAD binding domain
WU35_05605	SM01274	WU35_05605
WU35_05615	SM00344	helix_turn_helix ASNC type
WU35_05630	SM00861	Transketolase, pyrimidine binding domain
WU35_05690	SM00316	Ribosomal protein S1-like RNA-binding domain
WU35_05690	SM00732	Likely ribonuclease with RNase H fold.
WU35_05695	SM00491	WU35_05695
WU35_05705	SM00363	S4 RNA-binding domain
WU35_05720	SM00822	WU35_05720
WU35_05775	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
WU35_05785	SM00822	WU35_05785
WU35_05810	SM01007	Class II Aldolase and Adducin N-terminal domain
WU35_05885	SM01211	WU35_05885
WU35_05890	SM00912	haemagglutination activity domain
WU35_05905	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU35_05910	SM00530	Helix-turn-helix XRE-family like proteins 
WU35_05915	SM01007	Class II Aldolase and Adducin N-terminal domain
WU35_05950	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_05955	SM01130	WU35_05955
WU35_06000	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_06010	SM00420	helix_turn_helix, Deoxyribose operon repressor
WU35_06010	SM01134	WU35_06010
WU35_06020	SM00382	ATPases associated with a variety of cellular activities
WU35_06055	SM00344	helix_turn_helix ASNC type
WU35_06090	SM00421	helix_turn_helix, Lux Regulon
WU35_06100	SM00869	Autotransporter beta-domain
WU35_06110	SM00116	Domain in cystathionine beta-synthase and other proteins.
WU35_06110	SM01240	WU35_06110
WU35_06120	SM00530	Helix-turn-helix XRE-family like proteins 
WU35_06145	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_06160	SM00382	ATPases associated with a variety of cellular activities
WU35_06200	SM00849	Metallo-beta-lactamase superfamily
WU35_06200	SM01027	Beta-Casp domain
WU35_06220	SM00342	helix_turn_helix, arabinose operon control protein
WU35_06240	SM00829	Enoylreductase
WU35_06250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_06290	SM00382	ATPases associated with a variety of cellular activities
WU35_06295	SM00354	helix_turn _helix lactose operon repressor
WU35_06345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_06380	SM00873	B3/4 domain
WU35_06380	SM00874	tRNA synthetase B5 domain
WU35_06380	SM00896	Ferredoxin-fold anticodon binding domain
WU35_06385	SM00411	bacterial (prokaryotic) histone like domain
WU35_06390	SM00422	helix_turn_helix, mercury resistance
WU35_06495	SM00822	WU35_06495
WU35_06510	SM00382	ATPases associated with a variety of cellular activities
WU35_06525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_06525	SM00387	Histidine kinase-like ATPases
WU35_06525	SM00388	His Kinase A (phosphoacceptor) domain
WU35_06530	SM00448	cheY-homologous receiver domain
WU35_06530	SM00862	Transcriptional regulatory protein, C terminal
WU35_06535	SM00382	ATPases associated with a variety of cellular activities
WU35_06565	SM00881	CoA binding domain
WU35_06640	SM00858	WU35_06640
WU35_06800	SM00271	DnaJ molecular chaperone homology domain
WU35_06825	SM00382	ATPases associated with a variety of cellular activities
WU35_06850	SM01329	WU35_06850
WU35_06870	SM00448	cheY-homologous receiver domain
WU35_06870	SM00862	Transcriptional regulatory protein, C terminal
WU35_06875	SM00388	His Kinase A (phosphoacceptor) domain
WU35_06920	SM00463	Small MutS-related domain
WU35_06930	SM00843	WU35_06930
WU35_06940	SM00382	ATPases associated with a variety of cellular activities
WU35_06970	SM00267	diguanylate cyclase
WU35_06995	SM00342	helix_turn_helix, arabinose operon control protein
WU35_07015	SM01006	Siderophore biosynthesis protein domain
WU35_07065	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
WU35_07065	SM00267	diguanylate cyclase
WU35_07085	SM00421	helix_turn_helix, Lux Regulon
WU35_07085	SM00448	cheY-homologous receiver domain
WU35_07090	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WU35_07135	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_07150	SM00382	ATPases associated with a variety of cellular activities
WU35_07170	SM00834	Putative regulatory protein
WU35_07185	SM00421	helix_turn_helix, Lux Regulon
WU35_07215	SM00530	Helix-turn-helix XRE-family like proteins 
WU35_07225	SM01001	AIR carboxylase
WU35_07240	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_07245	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_07255	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_07255	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
WU35_07265	SM00382	ATPases associated with a variety of cellular activities
WU35_07345	SM00382	ATPases associated with a variety of cellular activities
WU35_07355	SM00493	WU35_07355
WU35_07425	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
WU35_07425	SM00534	ATPase domain of DNA mismatch repair MUTS family
WU35_07430	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
WU35_07445	SM01130	WU35_07445
WU35_07460	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_07460	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
WU35_07470	SM00382	ATPases associated with a variety of cellular activities
WU35_07475	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU35_07475	SM00954	Region found in RelA / SpoT proteins
WU35_07480	SM01409	WU35_07480
WU35_07485	SM00072	Guanylate kinase homologues.
WU35_07500	SM00822	WU35_07500
WU35_07515	SM00530	Helix-turn-helix XRE-family like proteins 
WU35_07550	SM00052	Putative diguanylate phosphodiesterase
WU35_07550	SM00267	diguanylate cyclase
WU35_07565	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU35_07570	SM01230	WU35_07570
WU35_07575	SM00091	PAS domain
WU35_07575	SM00387	Histidine kinase-like ATPases
WU35_07575	SM00388	His Kinase A (phosphoacceptor) domain
WU35_07580	SM00382	ATPases associated with a variety of cellular activities
WU35_07580	SM00448	cheY-homologous receiver domain
WU35_07605	SM00382	ATPases associated with a variety of cellular activities
WU35_07650	SM00487	DEAD-like helicases superfamily
WU35_07650	SM00490	helicase superfamily c-terminal domain
WU35_07695	SM00382	ATPases associated with a variety of cellular activities
WU35_07720	SM00984	UDP binding domain
WU35_07770	SM00382	ATPases associated with a variety of cellular activities
WU35_07775	SM00382	ATPases associated with a variety of cellular activities
WU35_07825	SM00327	von Willebrand factor (vWF) type A domain
WU35_07830	SM00028	Tetratricopeptide repeats
WU35_07830	SM00327	von Willebrand factor (vWF) type A domain
WU35_07870	SM00421	helix_turn_helix, Lux Regulon
WU35_07870	SM00448	cheY-homologous receiver domain
WU35_07875	SM00869	Autotransporter beta-domain
WU35_07880	SM00530	Helix-turn-helix XRE-family like proteins 
WU35_07985	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU35_08000	SM00822	WU35_08000
WU35_08100	SM00382	ATPases associated with a variety of cellular activities
WU35_08105	SM00382	ATPases associated with a variety of cellular activities
WU35_08185	SM00248	ankyrin repeats
WU35_08190	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_08195	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_08195	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
WU35_08205	SM00382	ATPases associated with a variety of cellular activities
WU35_08215	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
WU35_08255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_08255	SM00895	WU35_08255
WU35_08295	SM00052	Putative diguanylate phosphodiesterase
WU35_08300	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_08300	SM00073	Histidine Phosphotransfer domain
WU35_08300	SM00091	PAS domain
WU35_08300	SM00387	Histidine kinase-like ATPases
WU35_08300	SM00388	His Kinase A (phosphoacceptor) domain
WU35_08300	SM00448	cheY-homologous receiver domain
WU35_08305	SM00421	helix_turn_helix, Lux Regulon
WU35_08305	SM00448	cheY-homologous receiver domain
WU35_08310	SM00912	haemagglutination activity domain
WU35_08405	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_08425	SM01091	Transporter associated domain
WU35_08445	SM00028	Tetratricopeptide repeats
WU35_08450	SM00840	WU35_08450
WU35_08455	SM00478	endonuclease III
WU35_08570	SM00382	ATPases associated with a variety of cellular activities
WU35_08585	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_08590	SM00881	CoA binding domain
WU35_08620	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU35_08645	SM00028	Tetratricopeptide repeats
WU35_08660	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU35_08675	SM00869	Autotransporter beta-domain
WU35_08690	SM00487	DEAD-like helicases superfamily
WU35_08690	SM00490	helicase superfamily c-terminal domain
WU35_08695	SM00226	Low molecular weight phosphatase family
WU35_08720	SM00271	DnaJ molecular chaperone homology domain
WU35_08775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_08775	SM00866	WU35_08775
WU35_08840	SM00382	ATPases associated with a variety of cellular activities
WU35_08890	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WU35_08940	SM00387	Histidine kinase-like ATPases
WU35_08940	SM00388	His Kinase A (phosphoacceptor) domain
WU35_08960	SM00562	WU35_08960
WU35_08990	SM00564	beta-propeller repeat
WU35_08995	SM00382	ATPases associated with a variety of cellular activities
WU35_09015	SM00244	prohibitin homologues
WU35_09020	SM00244	prohibitin homologues
WU35_09030	SM00788	Adenylosuccinate synthetase
WU35_09045	SM00400	zinc finger
WU35_09045	SM00493	WU35_09045
WU35_09045	SM00766	DNA primase DnaG DnaB-binding
WU35_09090	SM00382	ATPases associated with a variety of cellular activities
WU35_09195	SM00382	ATPases associated with a variety of cellular activities
WU35_09235	SM00342	helix_turn_helix, arabinose operon control protein
WU35_09255	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU35_09270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_09270	SM00895	WU35_09270
WU35_09290	SM00382	ATPases associated with a variety of cellular activities
WU35_09325	SM00464	Found in ATP-dependent protease La (LON)
WU35_09335	SM00342	helix_turn_helix, arabinose operon control protein
WU35_09345	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
WU35_09435	SM00822	WU35_09435
WU35_09600	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WU35_09600	SM00465	GIY-YIG type nucleases (URI domain)
WU35_09635	SM00862	Transcriptional regulatory protein, C terminal
WU35_09655	SM00382	ATPases associated with a variety of cellular activities
WU35_09695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_09695	SM00895	WU35_09695
WU35_09715	SM00382	ATPases associated with a variety of cellular activities
WU35_09770	SM00411	bacterial (prokaryotic) histone like domain
WU35_09775	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU35_09915	SM00479	WU35_09915
WU35_09975	SM00841	Elongation factor P, C-terminal
WU35_09975	SM01185	WU35_09975
WU35_10005	SM00382	ATPases associated with a variety of cellular activities
WU35_10020	SM00028	Tetratricopeptide repeats
WU35_10050	SM00858	WU35_10050
WU35_10095	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU35_10100	SM00382	ATPases associated with a variety of cellular activities
WU35_10120	SM00318	Staphylococcal nuclease homologues
WU35_10185	SM00421	helix_turn_helix, Lux Regulon
WU35_10205	SM00882	Coenzyme A transferase
WU35_10210	SM00882	Coenzyme A transferase
WU35_10265	SM00382	ATPases associated with a variety of cellular activities
WU35_10265	SM00464	Found in ATP-dependent protease La (LON)
WU35_10270	SM00382	ATPases associated with a variety of cellular activities
WU35_10270	SM00994	ClpX C4-type zinc finger
WU35_10270	SM01086	C-terminal, D2-small domain, of ClpB protein
WU35_10290	SM00357	Cold shock protein domain
WU35_10300	SM00357	Cold shock protein domain
WU35_10315	SM00869	Autotransporter beta-domain
WU35_10350	SM00382	ATPases associated with a variety of cellular activities
WU35_10355	SM00965	Secretin and TonB N terminus short domain
WU35_10385	SM00904	Riboflavin kinase
WU35_10410	SM00344	helix_turn_helix ASNC type
WU35_10470	SM00749	bacterial OsmY and nodulation domain
WU35_10520	SM00422	helix_turn_helix, mercury resistance
WU35_10545	SM00257	Lysin motif
WU35_10560	SM01207	WU35_10560
WU35_10610	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU35_10650	SM00869	Autotransporter beta-domain
WU35_10660	SM00155	Phospholipase D. Active site motifs.
WU35_10675	SM01005	Alanine racemase, C-terminal domain
WU35_10685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_10685	SM00331	Sigma factor PP2C-like phosphatases
WU35_10685	SM01049	WU35_10685
WU35_10760	SM00382	ATPases associated with a variety of cellular activities
WU35_10880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU35_10880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_10925	SM00382	ATPases associated with a variety of cellular activities
WU35_10940	SM00450	Rhodanese Homology Domain
WU35_10955	SM00829	Enoylreductase
WU35_10970	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU35_10990	SM01329	WU35_10990
WU35_10995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_11015	SM00382	ATPases associated with a variety of cellular activities
WU35_11080	SM01209	WU35_11080
WU35_11080	SM01210	WU35_11080
WU35_11110	SM00869	Autotransporter beta-domain
WU35_11145	SM00316	Ribosomal protein S1-like RNA-binding domain
WU35_11165	SM00382	ATPases associated with a variety of cellular activities
WU35_11220	SM00481	DNA polymerase alpha chain like domain
WU35_11230	SM00382	ATPases associated with a variety of cellular activities
WU35_11230	SM00487	DEAD-like helicases superfamily
WU35_11230	SM00490	helicase superfamily c-terminal domain
WU35_11230	SM00847	Helicase associated domain (HA2)  Add an annotation
WU35_11295	SM00382	ATPases associated with a variety of cellular activities
WU35_11380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_11380	SM00866	WU35_11380
WU35_11420	SM00981	WU35_11420
WU35_11475	SM00028	Tetratricopeptide repeats
WU35_11475	SM00862	Transcriptional regulatory protein, C terminal
WU35_11485	SM01192	WU35_11485
WU35_11485	SM01193	WU35_11485
WU35_11540	SM00382	ATPases associated with a variety of cellular activities
WU35_11555	SM00882	Coenzyme A transferase
WU35_11715	SM00358	Double-stranded RNA binding motif
WU35_11715	SM00535	Ribonuclease III family
WU35_11725	SM00838	Elongation factor G C-terminus
WU35_11730	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU35_11755	SM00825	Beta-ketoacyl synthase
WU35_11765	SM00822	WU35_11765
WU35_11770	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
WU35_11805	SM00644	WU35_11805
WU35_11865	SM00859	Semialdehyde dehydrogenase, NAD binding domain
WU35_11870	SM01329	WU35_11870
WU35_11890	SM00382	ATPases associated with a variety of cellular activities
WU35_11925	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
WU35_11965	SM00852	Probable molybdopterin binding domain
WU35_11985	SM00052	Putative diguanylate phosphodiesterase
WU35_12005	SM00382	ATPases associated with a variety of cellular activities
WU35_12015	SM00855	Phosphoglycerate mutase family
WU35_12025	SM00851	MGS-like domain
WU35_12025	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
WU35_12030	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
WU35_12095	SM00267	diguanylate cyclase
WU35_12100	SM00244	prohibitin homologues
WU35_12160	SM00935	Outer membrane protein (OmpH-like)
WU35_12170	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU35_12215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU35_12310	SM00382	ATPases associated with a variety of cellular activities
WU35_12375	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
WU35_12375	SM00091	PAS domain
WU35_12375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU35_12375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_12380	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU35_12380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_12385	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU35_12385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_12400	SM00047	Lysozyme subfamily 2
WU35_12445	SM00858	WU35_12445
WU35_12480	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_12490	SM00382	ATPases associated with a variety of cellular activities
WU35_12505	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
WU35_12525	SM00354	helix_turn _helix lactose operon repressor
WU35_12550	SM00881	CoA binding domain
WU35_12555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_12555	SM00895	WU35_12555
WU35_12580	SM00869	Autotransporter beta-domain
WU35_12600	SM00155	Phospholipase D. Active site motifs.
WU35_12645	SM00642	Alpha-amylase domain
WU35_12650	SM00642	Alpha-amylase domain
WU35_12655	SM00642	Alpha-amylase domain
WU35_12660	SM00642	Alpha-amylase domain
WU35_12665	SM00642	Alpha-amylase domain
WU35_12680	SM00642	Alpha-amylase domain
WU35_12700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_12840	SM00953	WU35_12840
WU35_12875	SM00382	ATPases associated with a variety of cellular activities
WU35_12925	SM00382	ATPases associated with a variety of cellular activities
WU35_12930	SM00382	ATPases associated with a variety of cellular activities
WU35_12970	SM00434	DNA Topoisomerase IV
WU35_12980	SM00387	Histidine kinase-like ATPases
WU35_12980	SM00433	TopoisomeraseII
WU35_12990	SM00357	Cold shock protein domain
WU35_12990	SM00382	ATPases associated with a variety of cellular activities
WU35_12990	SM00959	Rho termination factor, N-terminal domain
WU35_13030	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
WU35_13030	SM00474	3'-5' exonuclease
WU35_13030	SM00475	5'-3' exonuclease
WU35_13030	SM00482	DNA polymerase A domain
WU35_13070	SM00316	Ribosomal protein S1-like RNA-binding domain
WU35_13080	SM00363	S4 RNA-binding domain
WU35_13105	SM00833	Cobalamin synthesis protein cobW C-terminal domain
WU35_13180	SM00382	ATPases associated with a variety of cellular activities
WU35_13185	SM00327	von Willebrand factor (vWF) type A domain
WU35_13210	SM01005	Alanine racemase, C-terminal domain
WU35_13245	SM00382	ATPases associated with a variety of cellular activities
WU35_13310	SM00869	Autotransporter beta-domain
WU35_13325	SM00382	ATPases associated with a variety of cellular activities
WU35_13325	SM01086	C-terminal, D2-small domain, of ClpB protein
WU35_13330	SM00100	Cyclic nucleotide-monophosphate binding domain
WU35_13330	SM00419	helix_turn_helix, cAMP Regulatory protein
WU35_13400	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_13415	SM00382	ATPases associated with a variety of cellular activities
WU35_13505	SM00479	WU35_13505
WU35_13565	SM00938	Nitrogen regulatory protein P-II
WU35_13600	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU35_13605	SM00852	Probable molybdopterin binding domain
WU35_13610	SM00852	Probable molybdopterin binding domain
WU35_13660	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU35_13660	SM00876	Biotin and Thiamin Synthesis associated domain
WU35_13685	SM00422	helix_turn_helix, mercury resistance
WU35_13755	SM00938	Nitrogen regulatory protein P-II
WU35_13765	SM00869	Autotransporter beta-domain
WU35_13785	SM00382	ATPases associated with a variety of cellular activities
WU35_13790	SM00382	ATPases associated with a variety of cellular activities
WU35_13835	SM00382	ATPases associated with a variety of cellular activities
WU35_13835	SM01086	C-terminal, D2-small domain, of ClpB protein
WU35_13845	SM01359	WU35_13845
WU35_13845	SM01360	WU35_13845
WU35_13855	SM00357	Cold shock protein domain
WU35_13920	SM00822	WU35_13920
WU35_14005	SM00670	Large family of predicted nucleotide-binding domains
WU35_14020	SM00382	ATPases associated with a variety of cellular activities
WU35_14055	SM00861	Transketolase, pyrimidine binding domain
WU35_14070	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_14095	SM00116	Domain in cystathionine beta-synthase and other proteins.
WU35_14095	SM00924	MgtE intracellular N domain
WU35_14145	SM00382	ATPases associated with a variety of cellular activities
WU35_14145	SM00930	WU35_14145
WU35_14195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_14195	SM00895	WU35_14195
WU35_14230	SM00382	ATPases associated with a variety of cellular activities
WU35_14260	SM00422	helix_turn_helix, mercury resistance
WU35_14285	SM00822	WU35_14285
WU35_14350	SM00822	WU35_14350
WU35_14375	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU35_14400	SM00829	Enoylreductase
WU35_14415	SM00382	ATPases associated with a variety of cellular activities
WU35_14440	SM00344	helix_turn_helix ASNC type
WU35_14485	SM00248	ankyrin repeats
WU35_14510	SM00382	ATPases associated with a variety of cellular activities
WU35_14545	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_14560	SM00382	ATPases associated with a variety of cellular activities
WU35_14600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_14600	SM00895	WU35_14600
WU35_14670	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
WU35_14670	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
WU35_14680	SM00342	helix_turn_helix, arabinose operon control protein
WU35_14715	SM00912	haemagglutination activity domain
WU35_14735	SM00528	Domain in histone-like proteins of HNS family
WU35_14775	SM00257	Lysin motif
WU35_14825	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU35_14850	SM00448	cheY-homologous receiver domain
WU35_14855	SM00387	Histidine kinase-like ATPases
WU35_14950	SM00363	S4 RNA-binding domain
WU35_14980	SM00859	Semialdehyde dehydrogenase, NAD binding domain
WU35_15020	SM00382	ATPases associated with a variety of cellular activities
WU35_15040	SM00487	DEAD-like helicases superfamily
WU35_15040	SM00490	helicase superfamily c-terminal domain
WU35_15050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_15050	SM00895	WU35_15050
WU35_15080	SM00344	helix_turn_helix ASNC type
WU35_15160	SM00878	Biotin carboxylase C-terminal domain
WU35_15190	SM00955	WU35_15190
WU35_15220	SM00344	helix_turn_helix ASNC type
WU35_15250	SM00957	SecA DEAD-like domain
WU35_15250	SM00958	SecA preprotein cross-linking domain
WU35_15270	SM00864	Tubulin/FtsZ family, GTPase domain
WU35_15270	SM00865	Tubulin/FtsZ family, C-terminal domain
WU35_15275	SM00842	Cell division protein FtsA
WU35_15340	SM00382	ATPases associated with a variety of cellular activities
WU35_15355	SM00151	SWI complex, BAF60b domains
WU35_15390	SM00344	helix_turn_helix ASNC type
WU35_15490	SM00382	ATPases associated with a variety of cellular activities
WU35_15490	SM01086	C-terminal, D2-small domain, of ClpB protein
WU35_15505	SM00833	Cobalamin synthesis protein cobW C-terminal domain
WU35_15520	SM00382	ATPases associated with a variety of cellular activities
WU35_15590	SM00996	S-adenosyl-L-homocysteine hydrolase
WU35_15590	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
WU35_15645	SM00487	DEAD-like helicases superfamily
WU35_15645	SM00490	helicase superfamily c-terminal domain
WU35_15650	SM00986	Uracil DNA glycosylase superfamily
WU35_15650	SM00987	UreE urease accessory protein, C-terminal domain 
WU35_15660	SM00155	Phospholipase D. Active site motifs.
WU35_15665	SM00382	ATPases associated with a variety of cellular activities
WU35_15715	SM00344	helix_turn_helix ASNC type
WU35_15715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_15755	SM00422	helix_turn_helix, mercury resistance
WU35_15755	SM00530	Helix-turn-helix XRE-family like proteins 
WU35_15790	SM00862	Transcriptional regulatory protein, C terminal
WU35_15800	SM00869	Autotransporter beta-domain
WU35_15880	SM01400	WU35_15880
WU35_15900	SM00028	Tetratricopeptide repeats
WU35_15905	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
WU35_15905	SM01232	WU35_15905
WU35_15910	SM00849	Metallo-beta-lactamase superfamily
WU35_15945	SM00387	Histidine kinase-like ATPases
WU35_15945	SM00388	His Kinase A (phosphoacceptor) domain
WU35_15950	SM00448	cheY-homologous receiver domain
WU35_15950	SM00862	Transcriptional regulatory protein, C terminal
WU35_16010	SM00984	UDP binding domain
WU35_16040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_16095	SM00988	UreE urease accessory protein, N-terminal domain
WU35_16145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_16145	SM00866	WU35_16145
WU35_16225	SM00382	ATPases associated with a variety of cellular activities
WU35_16230	SM00382	ATPases associated with a variety of cellular activities
WU35_16240	SM00822	WU35_16240
WU35_16315	SM00849	Metallo-beta-lactamase superfamily
WU35_16320	SM00257	Lysin motif
WU35_16360	SM00448	cheY-homologous receiver domain
WU35_16360	SM00862	Transcriptional regulatory protein, C terminal
WU35_16365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_16365	SM00387	Histidine kinase-like ATPases
WU35_16450	SM00382	ATPases associated with a variety of cellular activities
WU35_16485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_16485	SM00866	WU35_16485
WU35_16510	SM00903	Flavin reductase like domain
WU35_16590	SM00925	MltA specific insert domain
WU35_16620	SM00905	Dihydroneopterin aldolase
WU35_16630	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU35_16690	SM00382	ATPases associated with a variety of cellular activities
WU35_16710	SM00487	DEAD-like helicases superfamily
WU35_16710	SM00490	helicase superfamily c-terminal domain
WU35_16735	SM00382	ATPases associated with a variety of cellular activities
WU35_16855	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_16895	SM00155	Phospholipase D. Active site motifs.
WU35_16915	SM00834	Putative regulatory protein
WU35_16940	SM00116	Domain in cystathionine beta-synthase and other proteins.
WU35_16960	SM00382	ATPases associated with a variety of cellular activities
WU35_17015	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
WU35_17055	SM00937	WU35_17055
WU35_17085	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_17095	SM00881	CoA binding domain
WU35_17120	SM00344	helix_turn_helix ASNC type
WU35_17150	SM00881	CoA binding domain
WU35_17160	SM00829	Enoylreductase
WU35_17230	SM01130	WU35_17230
WU35_17290	SM00881	CoA binding domain
WU35_17295	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_17305	SM00861	Transketolase, pyrimidine binding domain
WU35_17345	SM00382	ATPases associated with a variety of cellular activities
WU35_17350	SM00382	ATPases associated with a variety of cellular activities
WU35_17380	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_17400	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU35_17400	SM00245	tail specific protease
WU35_17410	SM00855	Phosphoglycerate mutase family
WU35_17415	SM00450	Rhodanese Homology Domain
WU35_17475	SM00382	ATPases associated with a variety of cellular activities
WU35_17495	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
WU35_17560	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU35_17575	SM00448	cheY-homologous receiver domain
WU35_17580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU35_17580	SM00387	Histidine kinase-like ATPases
WU35_17580	SM00388	His Kinase A (phosphoacceptor) domain
WU35_17650	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_17670	SM00344	helix_turn_helix ASNC type
WU35_17720	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU35_17740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_17740	SM00895	WU35_17740
WU35_17780	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_17800	SM00869	Autotransporter beta-domain
WU35_17830	SM01119	WU35_17830
WU35_17840	SM00244	prohibitin homologues
WU35_17970	SM01234	WU35_17970
WU35_17985	SM00382	ATPases associated with a variety of cellular activities
WU35_17985	SM00760	Bacterial dnaA protein helix-turn-helix domain
WU35_17990	SM00480	DNA polymerase III beta subunit
WU35_17995	SM00387	Histidine kinase-like ATPases
WU35_17995	SM00433	TopoisomeraseII
WU35_18000	SM00346	helix_turn_helix isocitrate lyase regulation
WU35_18025	SM00342	helix_turn_helix, arabinose operon control protein
WU35_18025	SM00871	Bacterial transcription activator, effector binding domain
WU35_18045	SM00422	helix_turn_helix, mercury resistance
WU35_18050	SM00849	Metallo-beta-lactamase superfamily
WU35_18080	SM00878	Biotin carboxylase C-terminal domain
WU35_18080	SM01209	WU35_18080
WU35_18100	SM01119	WU35_18100
WU35_18135	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
WU35_18135	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
WU35_18135	SM00493	WU35_18135
WU35_18145	SM00382	ATPases associated with a variety of cellular activities
WU35_18175	SM00344	helix_turn_helix ASNC type
WU35_18185	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
WU35_18205	SM01018	B12 binding domain
WU35_18285	SM00838	Elongation factor G C-terminus
WU35_18285	SM00889	Elongation factor G, domain IV
WU35_18295	SM01403	WU35_18295
WU35_18315	SM01382	WU35_18315
WU35_18315	SM01383	WU35_18315
WU35_18330	SM00322	K homology RNA-binding domain
WU35_18365	SM01374	WU35_18365
WU35_18440	SM00363	S4 RNA-binding domain
WU35_18440	SM01390	WU35_18440
WU35_18445	SM00662	RNA polymerases D
WU35_18475	SM01004	Delta-aminolevulinic acid dehydratase
WU35_18505	SM01219	WU35_18505
WU35_18525	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU35_18575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_18575	SM00866	WU35_18575
WU35_18620	SM00382	ATPases associated with a variety of cellular activities
WU35_18675	SM01130	WU35_18675
WU35_18685	SM00257	Lysin motif
WU35_18735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_18745	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_18750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU35_18765	SM00382	ATPases associated with a variety of cellular activities
WU35_18780	SM00829	Enoylreductase
WU35_18830	SM00382	ATPases associated with a variety of cellular activities
WU35_18885	SM00984	UDP binding domain
WU35_18975	SM00100	Cyclic nucleotide-monophosphate binding domain
WU35_19000	SM00829	Enoylreductase
WU35_19030	SM00382	ATPases associated with a variety of cellular activities
WU35_19140	SM00530	Helix-turn-helix XRE-family like proteins 
WU35_19230	SM00342	helix_turn_helix, arabinose operon control protein
WU35_19340	SM00421	helix_turn_helix, Lux Regulon
WU35_19380	SM00382	ATPases associated with a variety of cellular activities
WU35_19395	SM00062	Bacterial periplasmic substrate-binding proteins
WU35_19400	SM00382	ATPases associated with a variety of cellular activities
WU35_19420	SM00478	endonuclease III
WU35_19425	SM00530	Helix-turn-helix XRE-family like proteins 
WU35_19500	SM01060	WU35_19500
WU35_19510	SM00382	ATPases associated with a variety of cellular activities
WU35_19530	SM00382	ATPases associated with a variety of cellular activities
WU35_19535	SM00382	ATPases associated with a variety of cellular activities
WU35_19565	SM00448	cheY-homologous receiver domain
WU35_19565	SM00862	Transcriptional regulatory protein, C terminal
WU35_19570	SM00387	Histidine kinase-like ATPases
WU35_19570	SM00388	His Kinase A (phosphoacceptor) domain
WU35_19595	SM00357	Cold shock protein domain
